Query psy14484
Match_columns 430
No_of_seqs 161 out of 1869
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 21:00:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 7.5E-73 2.6E-77 553.9 44.9 412 12-429 48-469 (473)
2 4atq_A 4-aminobutyrate transam 100.0 7E-69 2.4E-73 524.1 46.5 398 11-428 44-455 (456)
3 3i5t_A Aminotransferase; pyrid 100.0 4.7E-64 1.6E-68 497.8 48.2 412 12-429 35-455 (476)
4 3hmu_A Aminotransferase, class 100.0 1.8E-64 6.1E-69 500.0 42.3 407 13-429 37-453 (472)
5 4ao9_A Beta-phenylalanine amin 100.0 1.3E-64 4.4E-69 491.5 38.7 372 10-428 66-446 (454)
6 3tfu_A Adenosylmethionine-8-am 100.0 6.5E-62 2.2E-66 480.0 43.7 396 13-428 54-453 (457)
7 3gju_A Putative aminotransfera 100.0 1.8E-61 6.1E-66 478.5 45.0 413 12-429 32-457 (460)
8 4a6r_A Omega transaminase; tra 100.0 1.1E-61 3.7E-66 479.9 41.8 409 13-429 32-450 (459)
9 3dod_A Adenosylmethionine-8-am 100.0 2.9E-61 9.9E-66 475.5 42.6 413 11-429 24-444 (448)
10 3n5m_A Adenosylmethionine-8-am 100.0 6.9E-60 2.4E-64 466.4 44.8 408 12-427 30-451 (452)
11 4ffc_A 4-aminobutyrate aminotr 100.0 4.6E-59 1.6E-63 459.8 45.4 399 11-429 44-450 (453)
12 4a0g_A Adenosylmethionine-8-am 100.0 2E-61 6.7E-66 502.6 28.6 413 13-428 356-828 (831)
13 3oks_A 4-aminobutyrate transam 100.0 1.6E-58 5.4E-63 455.9 43.1 398 12-427 42-450 (451)
14 3i4j_A Aminotransferase, class 100.0 2.8E-57 9.5E-62 445.1 44.4 410 1-429 1-429 (430)
15 3nx3_A Acoat, acetylornithine 100.0 2.5E-54 8.7E-59 419.3 42.8 380 7-427 12-394 (395)
16 2oat_A Ornithine aminotransfer 100.0 9.4E-54 3.2E-58 420.2 43.2 381 10-427 55-438 (439)
17 3l44_A Glutamate-1-semialdehyd 100.0 8.4E-54 2.9E-58 420.8 42.8 378 12-428 36-430 (434)
18 1z7d_A Ornithine aminotransfer 100.0 9.5E-54 3.3E-58 419.6 42.8 382 11-429 45-430 (433)
19 3a8u_X Omega-amino acid--pyruv 100.0 7.7E-54 2.6E-58 422.9 41.9 411 13-429 32-448 (449)
20 4e77_A Glutamate-1-semialdehyd 100.0 2.8E-53 9.5E-58 416.4 41.5 384 6-427 28-428 (429)
21 3dxv_A Alpha-amino-epsilon-cap 100.0 3.4E-53 1.2E-57 417.1 41.9 391 12-428 24-425 (439)
22 3k28_A Glutamate-1-semialdehyd 100.0 1.2E-53 4.2E-58 418.9 38.4 385 4-428 26-427 (429)
23 3fq8_A Glutamate-1-semialdehyd 100.0 9.6E-53 3.3E-57 412.4 42.4 383 6-427 27-426 (427)
24 2pb2_A Acetylornithine/succiny 100.0 4E-53 1.4E-57 413.8 38.6 383 9-429 35-419 (420)
25 1zod_A DGD, 2,2-dialkylglycine 100.0 1.6E-52 5.3E-57 411.7 41.6 399 13-429 25-433 (433)
26 1s0a_A Adenosylmethionine-8-am 100.0 1.1E-51 3.6E-56 405.3 46.5 398 13-428 24-424 (429)
27 2cjg_A L-lysine-epsilon aminot 100.0 1.6E-52 5.6E-57 412.8 40.1 390 18-428 40-448 (449)
28 1ohv_A 4-aminobutyrate aminotr 100.0 2E-52 6.8E-57 414.0 36.8 391 13-428 45-471 (472)
29 2eo5_A 419AA long hypothetical 100.0 1.7E-50 5.8E-55 395.3 42.5 383 13-428 24-418 (419)
30 2yky_A Beta-transaminase; tran 100.0 6.7E-56 2.3E-60 433.6 0.0 370 13-428 82-460 (465)
31 2epj_A Glutamate-1-semialdehyd 100.0 8.8E-50 3E-54 392.1 39.8 380 12-429 37-432 (434)
32 2e7u_A Glutamate-1-semialdehyd 100.0 1.3E-49 4.3E-54 389.8 38.7 382 5-425 26-424 (424)
33 4adb_A Succinylornithine trans 100.0 3.7E-49 1.3E-53 384.3 41.0 385 7-429 15-401 (406)
34 3ruy_A Ornithine aminotransfer 100.0 4.3E-49 1.5E-53 382.1 40.5 377 7-425 12-391 (392)
35 2cy8_A D-phgat, D-phenylglycin 100.0 3.1E-48 1.1E-52 383.1 38.0 377 12-428 38-435 (453)
36 1sff_A 4-aminobutyrate aminotr 100.0 1.3E-46 4.5E-51 368.7 43.7 391 13-428 23-424 (426)
37 2ord_A Acoat, acetylornithine 100.0 5.1E-46 1.8E-50 361.1 39.5 379 7-427 16-396 (397)
38 1vef_A Acetylornithine/acetyl- 100.0 2.5E-44 8.5E-49 349.0 39.5 370 9-425 23-394 (395)
39 2eh6_A Acoat, acetylornithine 100.0 1.4E-42 4.7E-47 334.3 39.9 369 9-425 6-375 (375)
40 3l8a_A METC, putative aminotra 100.0 7.1E-37 2.4E-41 299.1 24.8 360 7-426 35-420 (421)
41 2w8t_A SPT, serine palmitoyltr 100.0 1.1E-33 3.7E-38 277.0 35.1 346 14-428 47-415 (427)
42 3tqx_A 2-amino-3-ketobutyrate 100.0 5.8E-33 2E-37 269.2 32.2 347 13-428 26-396 (399)
43 3dzz_A Putative pyridoxal 5'-p 100.0 2.5E-33 8.7E-38 271.0 26.4 357 15-428 11-389 (391)
44 3fdb_A Beta C-S lyase, putativ 100.0 1.4E-33 4.9E-38 271.5 22.9 346 19-428 11-376 (377)
45 1fc4_A 2-amino-3-ketobutyrate 100.0 3.5E-32 1.2E-36 264.0 32.6 349 12-428 26-397 (401)
46 3kax_A Aminotransferase, class 100.0 1.3E-32 4.5E-37 265.2 25.6 355 13-425 5-382 (383)
47 3a2b_A Serine palmitoyltransfe 100.0 3E-31 1E-35 257.3 34.1 347 12-428 25-392 (398)
48 1d2f_A MALY protein; aminotran 100.0 7.4E-32 2.5E-36 260.8 29.5 355 15-428 7-389 (390)
49 3kki_A CAI-1 autoinducer synth 100.0 5.2E-32 1.8E-36 263.6 26.7 335 24-427 49-403 (409)
50 3ly1_A Putative histidinol-pho 100.0 8.7E-32 3E-36 256.8 26.8 333 26-427 8-351 (354)
51 4dq6_A Putative pyridoxal phos 100.0 3.1E-32 1.1E-36 263.4 22.6 354 13-425 9-390 (391)
52 1yiz_A Kynurenine aminotransfe 100.0 2.3E-31 7.9E-36 260.6 28.3 347 34-426 37-427 (429)
53 3euc_A Histidinol-phosphate am 100.0 4.2E-31 1.4E-35 253.4 29.3 327 33-426 29-366 (367)
54 3ftb_A Histidinol-phosphate am 100.0 4.3E-31 1.5E-35 252.6 28.5 339 13-427 7-360 (361)
55 1bs0_A Protein (8-amino-7-oxon 100.0 1.8E-30 6.2E-35 250.5 32.6 344 11-424 20-383 (384)
56 2zc0_A Alanine glyoxylate tran 100.0 4.4E-31 1.5E-35 256.8 28.1 344 32-429 32-405 (407)
57 3aow_A Putative uncharacterize 100.0 3.9E-31 1.3E-35 260.1 26.9 344 33-429 75-446 (448)
58 1c7n_A Cystalysin; transferase 100.0 2.2E-31 7.5E-36 258.2 24.5 356 15-428 8-393 (399)
59 2zyj_A Alpha-aminodipate amino 100.0 1.6E-31 5.3E-36 259.2 21.5 342 33-429 31-394 (397)
60 3ffh_A Histidinol-phosphate am 100.0 1.1E-30 3.9E-35 249.9 26.9 321 33-425 31-363 (363)
61 2dou_A Probable N-succinyldiam 100.0 4.2E-31 1.4E-35 254.2 23.8 331 31-425 22-375 (376)
62 1j32_A Aspartate aminotransfer 100.0 1.1E-30 3.7E-35 252.4 26.6 341 31-429 27-388 (388)
63 3ezs_A Aminotransferase ASPB; 100.0 5.7E-31 1.9E-35 253.2 24.4 330 30-427 20-374 (376)
64 3jtx_A Aminotransferase; NP_28 100.0 2.1E-30 7.2E-35 251.0 27.8 340 27-425 23-395 (396)
65 3nra_A Aspartate aminotransfer 100.0 3.3E-31 1.1E-35 257.6 22.2 354 15-428 20-405 (407)
66 2x5d_A Probable aminotransfera 100.0 1.4E-30 4.7E-35 253.7 25.8 343 31-428 34-398 (412)
67 1vp4_A Aminotransferase, putat 100.0 1E-30 3.4E-35 255.8 24.8 345 33-428 42-418 (425)
68 3cq5_A Histidinol-phosphate am 100.0 1.6E-29 5.3E-34 242.7 30.4 322 37-426 33-366 (369)
69 3g0t_A Putative aminotransfera 100.0 5.8E-30 2E-34 251.3 27.8 341 28-427 38-436 (437)
70 3b46_A Aminotransferase BNA3; 100.0 3E-30 1E-34 253.9 25.8 349 32-423 55-442 (447)
71 1gd9_A Aspartate aminotransfer 100.0 7.4E-30 2.5E-34 246.6 28.0 336 34-427 26-385 (389)
72 1lc5_A COBD, L-threonine-O-3-p 100.0 1.8E-30 6.1E-35 248.7 23.5 328 30-428 20-360 (364)
73 2z61_A Probable aspartate amin 100.0 3.1E-30 1.1E-34 247.6 25.0 323 32-426 27-369 (370)
74 2o1b_A Aminotransferase, class 100.0 3.5E-30 1.2E-34 250.2 25.7 336 32-427 45-402 (404)
75 3h14_A Aminotransferase, class 100.0 4.1E-30 1.4E-34 248.7 25.9 339 31-428 28-382 (391)
76 3dyd_A Tyrosine aminotransfera 100.0 8.5E-30 2.9E-34 249.3 28.2 345 31-428 51-424 (427)
77 3ele_A Amino transferase; RER0 100.0 1.6E-29 5.5E-34 245.0 28.7 333 33-428 34-396 (398)
78 1o4s_A Aspartate aminotransfer 100.0 6.6E-30 2.3E-34 247.0 25.9 333 32-426 39-387 (389)
79 1iay_A ACC synthase 2, 1-amino 100.0 5.8E-29 2E-33 243.5 30.1 341 34-427 36-426 (428)
80 1v2d_A Glutamine aminotransfer 100.0 9.7E-30 3.3E-34 245.1 23.6 323 35-427 26-370 (381)
81 1xi9_A Putative transaminase; 100.0 1.2E-29 4.3E-34 246.5 24.5 343 31-429 35-404 (406)
82 1u08_A Hypothetical aminotrans 100.0 6.4E-29 2.2E-33 239.8 29.2 332 34-423 30-385 (386)
83 3get_A Histidinol-phosphate am 100.0 1.5E-29 5.2E-34 242.3 24.3 321 34-425 30-364 (365)
84 3b1d_A Betac-S lyase; HET: PLP 99.9 5.7E-33 1.9E-37 268.8 0.0 355 15-426 13-391 (392)
85 1fg7_A Histidinol phosphate am 100.0 1.3E-29 4.3E-34 242.1 23.2 314 33-424 28-354 (356)
86 3fvs_A Kynurenine--oxoglutarat 100.0 1.2E-28 3.9E-33 240.9 29.8 351 33-427 27-421 (422)
87 3piu_A 1-aminocyclopropane-1-c 100.0 1E-28 3.5E-33 242.2 27.7 352 28-428 30-432 (435)
88 2o0r_A RV0858C (N-succinyldiam 100.0 2.7E-29 9.4E-34 244.5 23.2 336 35-427 26-395 (411)
89 3hdo_A Histidinol-phosphate am 100.0 3.4E-29 1.2E-33 239.5 23.3 324 31-426 23-353 (360)
90 2gb3_A Aspartate aminotransfer 100.0 5.8E-29 2E-33 242.0 24.9 337 31-429 40-403 (409)
91 2x5f_A Aspartate_tyrosine_phen 100.0 5.6E-29 1.9E-33 243.7 22.7 346 34-428 47-429 (430)
92 1elu_A L-cysteine/L-cystine C- 100.0 3.8E-28 1.3E-32 234.5 28.1 334 32-423 15-387 (390)
93 3f9t_A TDC, L-tyrosine decarbo 100.0 3.1E-28 1.1E-32 235.4 27.6 327 51-426 42-396 (397)
94 1kmj_A Selenocysteine lyase; p 100.0 1.4E-27 5E-32 231.6 31.8 330 49-428 33-405 (406)
95 2bwn_A 5-aminolevulinate synth 100.0 1.7E-27 5.9E-32 231.0 32.1 332 32-427 44-399 (401)
96 1ajs_A Aspartate aminotransfer 100.0 8.2E-29 2.8E-33 241.2 22.4 345 32-428 28-411 (412)
97 3op7_A Aminotransferase class 100.0 7.2E-29 2.5E-33 238.5 20.8 297 78-428 64-371 (375)
98 3e2y_A Kynurenine-oxoglutarate 100.0 1.5E-27 5.3E-32 231.9 29.4 348 33-423 22-408 (410)
99 2ay1_A Aroat, aromatic amino a 100.0 4.3E-29 1.5E-33 241.7 17.6 342 32-424 24-392 (394)
100 3qgu_A LL-diaminopimelate amin 100.0 2.6E-28 8.7E-33 240.4 23.2 341 31-426 66-438 (449)
101 2q7w_A Aspartate aminotransfer 100.0 8.5E-29 2.9E-33 239.7 19.5 340 30-425 22-396 (396)
102 3rq1_A Aminotransferase class 100.0 7.3E-28 2.5E-32 234.9 26.1 340 33-428 37-415 (418)
103 3fkd_A L-threonine-O-3-phospha 100.0 7.4E-28 2.5E-32 229.2 25.1 320 27-426 8-340 (350)
104 1b5p_A Protein (aspartate amin 100.0 1.6E-27 5.5E-32 229.9 27.2 337 32-427 29-384 (385)
105 2r2n_A Kynurenine/alpha-aminoa 100.0 4.1E-27 1.4E-31 230.1 29.5 306 73-428 78-424 (425)
106 1t3i_A Probable cysteine desul 100.0 6.5E-27 2.2E-31 228.1 30.4 343 32-428 25-413 (420)
107 2dr1_A PH1308 protein, 386AA l 100.0 8.4E-27 2.9E-31 224.7 30.7 333 34-428 20-379 (386)
108 3ez1_A Aminotransferase MOCR f 100.0 2.6E-28 8.8E-33 238.5 19.6 304 77-428 70-415 (423)
109 1bw0_A TAT, protein (tyrosine 100.0 3.8E-27 1.3E-31 229.7 26.8 348 33-428 32-413 (416)
110 3t18_A Aminotransferase class 100.0 2.6E-27 8.9E-32 230.6 25.4 340 33-428 36-410 (413)
111 3p1t_A Putative histidinol-pho 100.0 5E-27 1.7E-31 222.2 26.6 315 32-426 14-335 (337)
112 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 3.2E-28 1.1E-32 233.4 17.9 329 34-428 9-370 (371)
113 1vjo_A Alanine--glyoxylate ami 100.0 9.1E-27 3.1E-31 225.2 25.4 330 32-425 32-392 (393)
114 3d6k_A Putative aminotransfera 100.0 1.3E-27 4.3E-32 233.5 18.9 346 36-429 34-419 (422)
115 1svv_A Threonine aldolase; str 100.0 9.3E-27 3.2E-31 222.1 24.4 331 35-428 14-358 (359)
116 3lvm_A Cysteine desulfurase; s 100.0 1.9E-26 6.5E-31 225.2 26.8 340 30-428 19-399 (423)
117 4f4e_A Aromatic-amino-acid ami 100.0 6.9E-27 2.4E-31 228.2 23.6 343 33-425 48-419 (420)
118 3ppl_A Aspartate aminotransfer 100.0 7.9E-28 2.7E-32 235.4 16.7 305 78-428 79-420 (427)
119 3ke3_A Putative serine-pyruvat 100.0 6.1E-27 2.1E-31 225.4 22.5 338 27-429 5-377 (379)
120 3zrp_A Serine-pyruvate aminotr 100.0 2.6E-26 8.9E-31 221.1 25.7 321 51-428 13-363 (384)
121 1eg5_A Aminotransferase; PLP-d 99.9 6.1E-26 2.1E-30 218.5 28.0 336 35-428 3-376 (384)
122 3asa_A LL-diaminopimelate amin 99.9 1.1E-26 3.8E-31 225.2 22.8 332 32-427 31-392 (400)
123 3fsl_A Aromatic-amino-acid ami 99.9 8E-27 2.7E-31 225.9 21.2 343 33-425 25-397 (397)
124 3if2_A Aminotransferase; YP_26 99.9 2.4E-26 8.3E-31 225.9 24.9 309 77-429 87-441 (444)
125 3cai_A Possible aminotransfera 99.9 5.5E-26 1.9E-30 220.7 26.8 334 32-423 25-404 (406)
126 3ei9_A LL-diaminopimelate amin 99.9 3.1E-26 1.1E-30 224.4 23.3 343 30-425 52-425 (432)
127 1yaa_A Aspartate aminotransfer 99.9 1.7E-26 6E-31 224.7 20.9 344 32-428 27-411 (412)
128 1qz9_A Kynureninase; kynurenin 99.9 1.7E-25 5.9E-30 217.9 27.5 340 32-428 27-402 (416)
129 3g7q_A Valine-pyruvate aminotr 99.9 4.6E-26 1.6E-30 222.1 23.4 308 77-429 79-414 (417)
130 3f0h_A Aminotransferase; RER07 99.9 6.8E-26 2.3E-30 217.7 24.2 319 51-427 30-373 (376)
131 3kgw_A Alanine-glyoxylate amin 99.9 3.8E-26 1.3E-30 220.6 22.5 322 51-428 34-388 (393)
132 1m32_A 2-aminoethylphosphonate 99.9 7.9E-26 2.7E-30 216.1 24.0 332 36-427 5-364 (366)
133 3nnk_A Ureidoglycine-glyoxylat 99.9 5.5E-26 1.9E-30 221.0 23.0 322 51-428 24-390 (411)
134 2z9v_A Aspartate aminotransfer 99.9 1.8E-25 6E-30 216.0 26.2 336 33-428 8-371 (392)
135 1uu1_A Histidinol-phosphate am 99.9 2.8E-26 9.5E-31 217.0 19.7 310 34-424 19-334 (335)
136 3e9k_A Kynureninase; kynurenin 99.9 3.5E-26 1.2E-30 226.1 21.0 349 33-427 67-460 (465)
137 4hvk_A Probable cysteine desul 99.9 5.8E-25 2E-29 211.3 28.5 333 36-428 3-373 (382)
138 4eb5_A Probable cysteine desul 99.9 1.3E-24 4.5E-29 209.1 28.9 333 36-428 3-373 (382)
139 2huf_A Alanine glyoxylate amin 99.9 2.5E-25 8.4E-30 215.1 23.9 337 31-428 16-383 (393)
140 1iug_A Putative aspartate amin 99.9 1.5E-25 5.3E-30 213.1 21.7 319 51-429 12-349 (352)
141 3isl_A Purine catabolism prote 99.9 1.8E-25 6.1E-30 217.7 22.4 330 47-428 14-390 (416)
142 3a9z_A Selenocysteine lyase; P 99.9 6E-25 2E-29 215.2 25.8 358 31-428 16-428 (432)
143 2yrr_A Aminotransferase, class 99.9 1.1E-25 3.8E-30 214.1 19.7 320 51-427 11-352 (353)
144 1v72_A Aldolase; PLP-dependent 99.9 1.8E-25 6.2E-30 213.0 20.7 325 34-428 7-353 (356)
145 3meb_A Aspartate aminotransfer 99.9 4E-25 1.4E-29 217.3 22.5 344 32-427 46-443 (448)
146 3mad_A Sphingosine-1-phosphate 99.9 3.2E-24 1.1E-28 214.7 28.8 331 51-428 108-469 (514)
147 2oqx_A Tryptophanase; lyase, p 99.9 3E-25 1E-29 219.6 20.1 355 32-427 39-441 (467)
148 3vax_A Putative uncharacterize 99.9 2.2E-25 7.5E-30 216.0 18.4 341 27-427 14-399 (400)
149 2ez2_A Beta-tyrosinase, tyrosi 99.9 4.3E-24 1.5E-28 210.6 27.3 340 32-428 40-431 (456)
150 2ch1_A 3-hydroxykynurenine tra 99.9 1.5E-24 5.3E-29 209.7 23.6 322 51-428 29-383 (396)
151 2dkj_A Serine hydroxymethyltra 99.9 7.2E-25 2.4E-29 212.8 20.4 331 34-427 23-387 (407)
152 2rfv_A Methionine gamma-lyase; 99.9 1.7E-24 5.8E-29 209.7 22.5 291 73-424 60-396 (398)
153 1ax4_A Tryptophanase; tryptoph 99.9 6.5E-24 2.2E-28 210.0 27.0 353 32-428 41-441 (467)
154 2oga_A Transaminase; PLP-depen 99.9 9E-24 3.1E-28 204.7 25.0 323 34-428 30-396 (399)
155 1jg8_A L-ALLO-threonine aldola 99.9 1.4E-23 4.7E-28 199.3 24.6 332 34-428 3-346 (347)
156 1cs1_A CGS, protein (cystathio 99.9 4.1E-23 1.4E-27 199.2 27.7 287 72-424 47-383 (386)
157 3f6t_A Aspartate aminotransfer 99.9 9.5E-25 3.2E-29 218.8 16.3 346 43-428 108-525 (533)
158 3tcm_A Alanine aminotransferas 99.9 1.4E-23 4.7E-28 209.0 24.3 331 51-429 107-495 (500)
159 2qma_A Diaminobutyrate-pyruvat 99.9 6.5E-23 2.2E-27 204.3 28.4 352 32-428 99-496 (497)
160 3mc6_A Sphingosine-1-phosphate 99.9 1.3E-23 4.4E-28 209.5 23.3 333 50-429 75-438 (497)
161 7aat_A Aspartate aminotransfer 99.9 1.6E-23 5.6E-28 202.9 22.7 339 35-425 29-400 (401)
162 4eu1_A Mitochondrial aspartate 99.9 7.9E-24 2.7E-28 205.7 19.7 332 34-425 41-408 (409)
163 2bkw_A Alanine-glyoxylate amin 99.9 1E-23 3.5E-28 203.0 20.1 319 51-427 16-383 (385)
164 2cb1_A O-acetyl homoserine sul 99.9 1.3E-22 4.4E-27 197.3 27.8 307 46-423 28-411 (412)
165 3qhx_A Cystathionine gamma-syn 99.9 6.1E-23 2.1E-27 198.1 24.6 283 73-421 62-391 (392)
166 1wyu_B Glycine dehydrogenase s 99.9 7.2E-23 2.5E-27 202.6 25.4 331 48-426 75-439 (474)
167 1gc0_A Methionine gamma-lyase; 99.9 1.7E-22 5.9E-27 195.5 26.7 288 73-424 61-397 (398)
168 3uwc_A Nucleotide-sugar aminot 99.9 3.5E-23 1.2E-27 198.6 20.9 307 55-427 21-370 (374)
169 2vi8_A Serine hydroxymethyltra 99.9 3.6E-23 1.2E-27 200.7 21.0 331 34-428 24-387 (405)
170 3lws_A Aromatic amino acid bet 99.9 2.5E-23 8.5E-28 198.4 18.2 332 35-425 4-356 (357)
171 3ihj_A Alanine aminotransferas 99.9 3.4E-22 1.2E-26 198.6 26.0 331 52-429 103-494 (498)
172 2fnu_A Aminotransferase; prote 99.9 3.4E-22 1.1E-26 191.7 25.1 313 51-428 11-372 (375)
173 1mdo_A ARNB aminotransferase; 99.9 5.8E-22 2E-26 191.4 26.7 311 52-427 19-385 (393)
174 1e5e_A MGL, methionine gamma-l 99.9 9E-23 3.1E-27 197.7 20.9 286 74-429 59-396 (404)
175 3dr4_A Putative perosamine syn 99.9 1.4E-22 4.9E-27 195.7 21.8 310 53-425 36-390 (391)
176 3k7y_A Aspartate aminotransfer 99.9 1.9E-22 6.6E-27 194.8 21.9 341 34-427 29-404 (405)
177 3pj0_A LMO0305 protein; struct 99.9 6.3E-23 2.2E-27 195.7 18.2 317 52-424 28-358 (359)
178 3ffr_A Phosphoserine aminotran 99.9 4.7E-22 1.6E-26 189.6 23.5 312 51-425 15-361 (362)
179 3frk_A QDTB; aminotransferase, 99.9 1.6E-22 5.5E-27 194.0 20.0 313 47-426 7-366 (373)
180 1b9h_A AHBA synthase, protein 99.9 2.5E-21 8.7E-26 186.7 27.3 316 52-427 16-387 (388)
181 3acz_A Methionine gamma-lyase; 99.9 1.3E-21 4.3E-26 188.8 24.9 307 46-421 30-386 (389)
182 1pff_A Methionine gamma-lyase; 99.9 3E-22 1E-26 188.9 19.2 279 81-424 2-330 (331)
183 3ndn_A O-succinylhomoserine su 99.9 8.9E-22 3E-26 190.9 22.0 293 72-425 76-413 (414)
184 2po3_A 4-dehydrase; external a 99.9 2E-20 6.9E-25 182.6 31.5 315 45-427 25-385 (424)
185 3nyt_A Aminotransferase WBPE; 99.9 4.4E-21 1.5E-25 183.6 24.1 305 53-424 16-360 (367)
186 3gbx_A Serine hydroxymethyltra 99.9 5E-22 1.7E-26 193.5 16.9 322 51-428 42-396 (420)
187 3ecd_A Serine hydroxymethyltra 99.9 3.6E-21 1.2E-25 187.7 22.7 330 36-428 34-397 (425)
188 1o69_A Aminotransferase; struc 99.9 2.7E-20 9.2E-25 179.9 28.2 318 52-426 11-385 (394)
189 3n0l_A Serine hydroxymethyltra 99.9 4.7E-21 1.6E-25 186.5 22.6 322 51-427 37-388 (417)
190 3h7f_A Serine hydroxymethyltra 99.9 6.2E-21 2.1E-25 187.4 23.4 321 51-427 57-413 (447)
191 2aeu_A Hypothetical protein MJ 99.9 2.2E-21 7.5E-26 186.0 19.2 326 32-429 25-372 (374)
192 3nmy_A Xometc, cystathionine g 99.9 4.1E-21 1.4E-25 185.4 21.1 286 72-421 62-396 (400)
193 2jis_A Cysteine sulfinic acid 99.9 5.3E-20 1.8E-24 183.9 29.6 320 77-427 148-514 (515)
194 1qgn_A Protein (cystathionine 99.9 8.2E-21 2.8E-25 185.1 22.5 289 73-428 110-445 (445)
195 2okj_A Glutamate decarboxylase 99.9 4.6E-20 1.6E-24 184.0 28.3 321 78-429 133-503 (504)
196 2dgk_A GAD-beta, GADB, glutama 99.9 2.6E-20 8.9E-25 183.3 25.9 335 50-428 53-434 (452)
197 1ibj_A CBL, cystathionine beta 99.9 1.9E-21 6.6E-26 191.0 17.4 288 73-428 129-462 (464)
198 3cog_A Cystathionine gamma-lya 99.9 9.4E-21 3.2E-25 183.3 21.6 286 73-425 63-399 (403)
199 1n8p_A Cystathionine gamma-lya 99.9 1.3E-20 4.4E-25 181.9 22.3 287 73-424 51-391 (393)
200 2c81_A Glutamine-2-deoxy-scyll 99.9 8.1E-20 2.8E-24 178.0 27.5 318 52-428 15-414 (418)
201 2ctz_A O-acetyl-L-homoserine s 99.9 1.2E-20 4.1E-25 183.8 21.3 290 73-425 54-420 (421)
202 2zy4_A L-aspartate beta-decarb 99.9 1.9E-20 6.4E-25 187.7 22.1 352 36-428 106-522 (546)
203 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.9E-19 9.8E-24 172.4 29.3 318 47-421 7-389 (390)
204 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 9.1E-20 3.1E-24 178.6 25.6 318 52-426 42-434 (437)
205 4h51_A Aspartate aminotransfer 99.8 1.9E-19 6.3E-24 174.0 25.3 349 32-428 42-417 (420)
206 3hbx_A GAD 1, glutamate decarb 99.8 4.1E-19 1.4E-23 176.7 27.1 333 51-428 68-444 (502)
207 2z67_A O-phosphoseryl-tRNA(SEC 99.8 2.4E-19 8.1E-24 176.5 24.8 290 77-425 133-455 (456)
208 2x3l_A ORN/Lys/Arg decarboxyla 99.8 3.7E-20 1.3E-24 181.5 16.4 288 74-427 54-352 (446)
209 3vp6_A Glutamate decarboxylase 99.8 1.9E-18 6.4E-23 172.2 28.3 318 77-427 135-504 (511)
210 4e1o_A HDC, histidine decarbox 99.8 5.1E-18 1.7E-22 168.0 28.5 313 77-429 118-479 (481)
211 2fq6_A Cystathionine beta-lyas 99.8 4E-19 1.4E-23 172.1 20.1 291 72-423 77-413 (415)
212 1w23_A Phosphoserine aminotran 99.8 2.2E-19 7.4E-24 171.2 16.9 313 51-427 14-359 (360)
213 2c0r_A PSAT, phosphoserine ami 99.8 2.5E-19 8.6E-24 171.0 16.6 315 51-427 15-360 (362)
214 1js3_A DDC;, DOPA decarboxylas 99.8 1.5E-17 5.2E-22 165.0 29.4 314 77-429 113-475 (486)
215 1rv3_A Serine hydroxymethyltra 99.8 4.1E-19 1.4E-23 175.9 16.9 333 36-427 46-430 (483)
216 3ht4_A Aluminum resistance pro 99.8 1.6E-18 5.6E-23 168.4 20.3 298 51-391 36-345 (431)
217 3k40_A Aromatic-L-amino-acid d 99.8 2.2E-17 7.4E-22 163.1 28.5 315 77-429 113-472 (475)
218 2fyf_A PSAT, phosphoserine ami 99.8 1.4E-18 4.8E-23 168.0 19.5 312 51-427 51-397 (398)
219 3ri6_A O-acetylhomoserine sulf 99.8 7.2E-18 2.5E-22 163.8 22.1 285 73-425 78-429 (430)
220 3ju7_A Putative PLP-dependent 99.8 3.1E-17 1.1E-21 157.2 24.5 316 51-427 14-374 (377)
221 3e77_A Phosphoserine aminotran 99.8 4.5E-18 1.6E-22 161.5 17.6 325 49-427 22-374 (377)
222 3bwn_A AT1G70560, L-tryptophan 99.8 1.6E-18 5.5E-23 167.1 14.5 254 95-426 92-385 (391)
223 2hox_A ALLIIN lyase 1; cystein 99.8 8.3E-19 2.8E-23 171.0 9.1 318 32-426 54-423 (427)
224 2a7v_A Serine hydroxymethyltra 99.8 3E-17 1E-21 161.3 20.0 316 51-426 66-439 (490)
225 1wyu_A Glycine dehydrogenase ( 99.7 1.3E-16 4.5E-21 156.1 23.0 291 77-425 108-437 (438)
226 3m5u_A Phosphoserine aminotran 99.7 5.5E-16 1.9E-20 146.7 21.6 315 51-427 16-359 (361)
227 3jzl_A Putative cystathionine 99.7 9.3E-16 3.2E-20 147.8 22.8 293 51-391 30-339 (409)
228 3qm2_A Phosphoserine aminotran 99.7 3.7E-17 1.3E-21 156.1 11.3 327 34-427 27-384 (386)
229 1c4k_A Protein (ornithine deca 99.7 1.8E-15 6.1E-20 155.2 22.9 306 76-427 172-565 (730)
230 3i16_A Aluminum resistance pro 99.7 4.5E-15 1.5E-19 143.5 24.1 293 53-391 46-356 (427)
231 2vyc_A Biodegradative arginine 99.7 2.1E-15 7.3E-20 156.0 21.6 310 77-426 205-603 (755)
232 3hvy_A Cystathionine beta-lyas 99.7 1.1E-14 3.8E-19 140.8 24.0 294 51-390 45-355 (427)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 1.6E-12 5.5E-17 123.3 25.1 287 95-428 135-461 (501)
234 3n75_A LDC, lysine decarboxyla 99.5 4.3E-13 1.5E-17 136.5 21.3 308 77-426 195-558 (715)
235 3bc8_A O-phosphoseryl-tRNA(SEC 99.4 6.4E-11 2.2E-15 113.8 27.1 303 78-427 99-442 (450)
236 3ou5_A Serine hydroxymethyltra 98.9 1.9E-07 6.5E-12 88.4 19.3 296 79-426 101-439 (490)
237 1tks_A 3,4-dihydroxy-2-butanon 51.7 12 0.00043 31.1 3.6 38 199-241 157-194 (204)
238 1vhx_A Putative holliday junct 48.5 28 0.00095 27.5 5.2 57 187-246 43-101 (150)
239 3v7e_A Ribosome-associated pro 44.7 45 0.0016 23.0 5.3 45 189-244 17-61 (82)
240 1snn_A DHBP synthase, 3,4-dihy 44.5 21 0.00072 30.3 4.0 37 199-241 176-212 (227)
241 3mio_A DHBP synthase, 3,4-dihy 44.4 22 0.00077 29.6 4.1 37 200-241 157-194 (206)
242 2lbw_A H/ACA ribonucleoprotein 38.9 44 0.0015 25.2 4.7 44 189-242 26-69 (121)
243 3inp_A D-ribulose-phosphate 3- 37.8 1.3E+02 0.0043 25.9 8.1 20 223-242 180-201 (246)
244 2aif_A Ribosomal protein L7A; 37.6 93 0.0032 23.9 6.5 43 189-241 47-89 (135)
245 3cpq_A 50S ribosomal protein L 34.6 68 0.0023 23.6 5.1 41 189-240 27-67 (110)
246 1g57_A DHBP synthase, 3,4-dihy 34.0 39 0.0013 28.4 4.0 36 200-241 166-201 (217)
247 2ale_A SNU13, NHP2/L7AE family 31.8 61 0.0021 24.9 4.6 44 189-242 38-81 (134)
248 1uta_A FTSN, MSGA, cell divisi 31.6 67 0.0023 21.9 4.4 44 380-423 23-68 (81)
249 1x60_A Sporulation-specific N- 29.8 1E+02 0.0035 20.7 5.1 44 380-423 23-68 (79)
250 1iv0_A Hypothetical protein; r 28.9 1.6E+02 0.0055 21.0 6.5 56 187-246 39-96 (98)
251 4gqr_A Pancreatic alpha-amylas 26.5 42 0.0015 31.9 3.6 27 221-247 75-101 (496)
252 3pzt_A Endoglucanase; alpha/be 26.4 1.5E+02 0.0053 26.4 7.1 22 223-244 105-126 (327)
253 1w41_A 50S ribosomal protein L 26.2 94 0.0032 22.3 4.6 42 189-241 22-63 (101)
254 3j21_Z 50S ribosomal protein L 26.0 99 0.0034 22.1 4.7 42 189-241 21-62 (99)
255 1lwj_A 4-alpha-glucanotransfer 25.5 57 0.0019 30.8 4.2 30 221-250 68-97 (441)
256 3bzy_B ESCU; auto cleavage pro 24.8 42 0.0014 23.4 2.3 21 225-245 29-49 (83)
257 2xzm_U Ribosomal protein L7AE 24.6 91 0.0031 23.6 4.3 43 189-241 30-72 (126)
258 3cg6_A Growth arrest and DNA-d 24.0 1.5E+02 0.0053 23.0 5.5 23 222-244 62-85 (146)
259 1k4i_A 3,4-dihydroxy-2-butanon 23.7 73 0.0025 27.0 3.9 38 199-241 165-212 (233)
260 3o63_A Probable thiamine-phosp 22.5 59 0.002 27.9 3.3 52 187-243 45-103 (243)
261 1wza_A Alpha-amylase A; hydrol 21.9 77 0.0026 30.3 4.3 29 221-249 80-108 (488)
262 2z1k_A (NEO)pullulanase; hydro 21.7 78 0.0027 30.1 4.3 29 221-249 95-123 (475)
263 2guy_A Alpha-amylase A; (beta- 21.4 79 0.0027 30.1 4.3 31 220-250 95-125 (478)
264 1g94_A Alpha-amylase; beta-alp 21.0 64 0.0022 30.5 3.5 28 221-248 63-90 (448)
265 1wzl_A Alpha-amylase II; pullu 20.9 86 0.0029 30.9 4.5 49 201-250 186-247 (585)
266 1t9k_A Probable methylthioribo 20.9 3.7E+02 0.013 24.3 8.4 38 202-242 228-267 (347)
267 1p1j_A Inositol-3-phosphate sy 20.8 2.6E+02 0.0089 26.8 7.4 23 225-247 302-324 (533)
268 3ipw_A Hydrolase TATD family p 20.8 4.5E+02 0.015 23.4 9.4 25 93-117 65-89 (325)
269 1mxg_A Alpha amylase; hyperthe 20.7 77 0.0026 29.8 4.0 29 221-249 85-113 (435)
270 3edf_A FSPCMD, cyclomaltodextr 20.7 1E+02 0.0034 30.5 5.0 63 187-250 146-226 (601)
271 1ht6_A AMY1, alpha-amylase iso 20.6 77 0.0027 29.4 4.0 30 221-250 67-96 (405)
272 1ua7_A Alpha-amylase; beta-alp 20.6 73 0.0025 29.8 3.8 29 221-249 73-101 (422)
273 2fc3_A 50S ribosomal protein L 20.1 95 0.0033 23.3 3.7 43 189-241 34-76 (124)
274 3t7y_A YOP proteins translocat 20.0 56 0.0019 23.5 2.2 21 225-245 44-64 (97)
275 1j0h_A Neopullulanase; beta-al 20.0 82 0.0028 31.0 4.2 30 221-250 221-250 (588)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=7.5e-73 Score=553.94 Aligned_cols=412 Identities=25% Similarity=0.466 Sum_probs=366.6
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhc
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~ 90 (430)
..|+++.+++|. |+||.|||+||||.+++|++++||+||+|.+|+++|++++.+. ..+...++...+|+++|.+..
T Consensus 48 ~~P~vi~rg~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~ 124 (473)
T 4e3q_A 48 RGTVVVTHGEGP---YIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVS 124 (473)
T ss_dssp HCCEEEEEEETT---EEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHS
T ss_pred CCCEEEEeeecC---EEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhC
Confidence 358999999998 7999999999999999999999999999999999999997654 333556788899999999999
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
|.+.++|+|++||+|||+.|+|+++.++..+|.+++.+||.+.++|||.+.+++++++.+ ++..+.+.......++.|+
T Consensus 125 p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~-~~~~~~~~~~~~~~~~~p~ 203 (473)
T 4e3q_A 125 PFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKP-YNSVFGLPLPGFVHLTCPH 203 (473)
T ss_dssp SCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCG-GGGGGTCSCTTEEEECCCC
T ss_pred CCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccc-cccccCCCCCcccccCCCc
Confidence 888899999999999999999999999999999999999999999999999999998864 6667777778888888887
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINK-GNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~-~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++... +...+.+.....+++++.+.+. ++++++||+|| +++++|+++|+++|+++|+++|++||++||+|||++||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EP-iqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGf 282 (473)
T 4e3q_A 204 YWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEP-VMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGF 282 (473)
T ss_dssp HHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSS
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCC-ccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccC
Confidence 665533 4455566666778888877765 56899999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
||+|.+|+++++++.||++|++|+++||++|+|++++++++++.+... .....+.|++||++||++|++++++|+++++
T Consensus 283 GRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~ 362 (473)
T 4e3q_A 283 GRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN 362 (473)
T ss_dssp STTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred CcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc
Confidence 999999999999999999999999999989999999999999877541 1123567999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecCCEE
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIGNTV 401 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~~~l 401 (430)
+++.+++++++++|+++|+++...+.+..+++.|+|+++++. .+.... ...+.++.+.++++|+++.+.++.+
T Consensus 363 ~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~gielv-~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~i 441 (473)
T 4e3q_A 363 EGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAV-KDKASKTPFDGNLSVSERIANTCTDLGLICRPLGQSV 441 (473)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEEC-SBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEETTEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecceEEEEEEe-cCccccccccccHHHHHHHHHHHHHCCcEEEecCCEE
Confidence 999999999999999999999767888899999999999987 543221 2245789999999999999999999
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
||+|++++|++|+|+++++|++++++++
T Consensus 442 ~l~PPL~it~~eid~~~~~l~~al~~v~ 469 (473)
T 4e3q_A 442 VLCPPFILTEAQMDEMFDKLEKALDKVF 469 (473)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=7e-69 Score=524.05 Aligned_cols=398 Identities=24% Similarity=0.374 Sum_probs=343.6
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
++.|+++.+++|+ |+||.|||+||||.+++|+.++||+||+|++|+++++.++.+......+++...+++++|.++.
T Consensus 44 ~~~P~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~ 120 (456)
T 4atq_A 44 SGVPVYVEDADGG---IIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT 120 (456)
T ss_dssp CSCSSCEEEEETT---EEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCeEEeeecC---EEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC
Confidence 4579999999988 7999999999999999999999999999999999999998766555677888899999999999
Q ss_pred CC-CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc-chhhhhccCCCeeEeCC
Q psy14484 91 QY-KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS-FKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~-~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 168 (430)
|. ..++++|++||+|||+.|+|+++.++ +|.+|+.++++|||++.+++++++... ++..+.++..++.++|+
T Consensus 121 p~~~~~~v~f~~sGsEA~e~AlklAr~~t------~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~ 194 (456)
T 4atq_A 121 PGDHAKRTVLFNSGAEAVENAVKVARLAT------GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPM 194 (456)
T ss_dssp SCSSCEEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECC
T ss_pred CCCCCcEEEEeCChHHHHHHHHHHHhhhh------cCCeEEEEecccCCccccccccccCccccccCCCCccccceeccc
Confidence 74 36789999999999999999999987 899999999999999999988877653 56677777788888887
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 169 PDSRNINKGNS-ANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 169 ~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
+..++...... ..+.....++.+++.+. ++++++||+|| +++++|.++|+++|+++|+++|++||++||+||||+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~iAAvivEP-iqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG 271 (456)
T 4atq_A 195 SYPFREENPEITGAEAAKRAITMIEKQIG--GDQVAAIIIEP-IQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSG 271 (456)
T ss_dssp CCGGGCSSTTCCHHHHHHHHHHHHHHHTC--GGGEEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ccccccCCCcccHHHHHHHHHHHHHHhhc--CCceEEEEecc-ccCCCCccccchhhhHHHHHHHhhcCCceEecccccc
Confidence 76554432111 12222233444444332 46899999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|||+|.+|+++++++.||++|++|+++|| +|+|++++++++++.+.. ..|++||++||++|+++.++|+.+++
T Consensus 272 ~GRtG~~~a~e~~gv~PDivt~gK~lggg-~P~~av~~~~~i~~~~~~------~~~~~Tf~gnpla~aaala~L~~i~~ 344 (456)
T 4atq_A 272 FCRTGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVHP------GGLGGTYGGNPVACAAALAAIDTMEQ 344 (456)
T ss_dssp TTTTSSSSGGGGTTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT------TSSCCSSSSCHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccCCCCchhhhhhcccCc-CCceeeEecHHHHhcccc------cCCCCCCCCChHHHHhhHHHHHHHhh
Confidence 99999999999999999999999999988 699999999999988765 45899999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcC-----CCeeeEeecceEEEEEEeecCCc--cchhHHHHHHHHHHHCCcEEeec--
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITH-----PKIINFRQKGMIWAFDVIIEDPE--QIETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~-----~~~~~~~~~g~~~~~~~~~~~~~--~~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
+++.+++++.+++++++|+++ .++ +.+.++++.|+|+++++. .+.. ...+.+.++.+.|+++|+++.++
T Consensus 345 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~-~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~ 423 (456)
T 4atq_A 345 HDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELV-QPGSKEPNAELTKAVAAACLKEGVIILTCGT 423 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEB-CTTSCCBCHHHHHHHHHHHHHTTEECEEECT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEe-cCCCCCcCHHHHHHHHHHHHHCCCEEEecCC
Confidence 999999999999999999988 443 567899999999999997 5422 23345678999999999998875
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.|||+|++++|+++|++++++|+++++..
T Consensus 424 ~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 424 YGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999999999999999753
No 3
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=4.7e-64 Score=497.79 Aligned_cols=412 Identities=26% Similarity=0.439 Sum_probs=363.3
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|+ |+||.||++||||++|+|+++|||+||+|++|++++++++.+.....+.++...+++++|++.++
T Consensus 35 ~~p~~~~~~~G~---~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~ 111 (476)
T 3i5t_A 35 SAQPVLTHAEGI---YVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTP 111 (476)
T ss_dssp CCCCBEEEEEBT---EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSS
T ss_pred CCCeeEEEeecC---EEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCC
Confidence 368999999888 79999999999999999999999999999999999998876544446788999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++|+|++||+||++.|+++++.++..+|.+++++||+++++|||++..++++++.+.++..+.++..+..+++.|..
T Consensus 112 ~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 191 (476)
T 3i5t_A 112 GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNP 191 (476)
T ss_dssp TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCG
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcc
Confidence 78899999999999999999999998888888889999999999999999999999988888888888888888888876
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++. .+.+.+++....+++|++++++. ++++++|++|| +++++|.++|+++||++|+++|++||++||+||||+||||
T Consensus 192 ~~~-~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep-~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr 269 (476)
T 3i5t_A 192 RHA-GNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEP-ILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGR 269 (476)
T ss_dssp GGC-TTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccc-CCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcc
Confidence 655 44455566666689999999764 36799999999 9999999999999999999999999999999999999999
Q ss_pred cccccccc-cCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 251 TGKFFACE-HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 251 ~g~~~~~~-~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+|.+++++ .+++.||++||||++++|++|+|++++++++++.+... ...+.+.+++||++++++++++.++|+.++++
T Consensus 270 ~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~ 349 (476)
T 3i5t_A 270 CGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMERE 349 (476)
T ss_dssp TSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred ccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhH
Confidence 99888888 89999999999999999878999999999999888651 11244678899999999999999999988888
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccch------hHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIE------TFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
++.++++++.+++++.|+++..++.+..+++.|+|+++++. .+..+.. ..+..+++.|+++||++.+.++.+|
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iR 428 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCL-LDPTRADGTAEDKAFTLKIDERCFELGLIVRPLGDLCV 428 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEEC-CC-----CCHHHHHHHHHHHHHHHHTTEECEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEe-cCccccccccchhHHHHHHHHHHHHCCCEEEecCCEEE
Confidence 99999999999999999988777888889999999999987 5422111 1356789999999999999889999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.+|+++|++++++|++++.++.
T Consensus 429 i~p~l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 429 ISPPLIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998653
No 4
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.8e-64 Score=499.98 Aligned_cols=407 Identities=28% Similarity=0.474 Sum_probs=357.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++.+++|. |+||.||++||||++|+|+++|||+||+|++|+.++++++.+ .....++++...+++++|++.+|
T Consensus 37 ~p~~~~~~~G~---~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~ 113 (472)
T 3hmu_A 37 GTRVITRARGV---WLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAP 113 (472)
T ss_dssp CCEEEEEEEBT---EEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSC
T ss_pred CCeeEEEeecC---EEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC
Confidence 68999999888 799999999999999999999999999999999999988653 33346778999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.++|+|++||+||++.|+++++.++..+|.+++++||+++++|||++.++.++++.+.++..+. +..++..++.|..
T Consensus 114 ~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~ 192 (472)
T 3hmu_A 114 GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNW 192 (472)
T ss_dssp TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCH
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCcc
Confidence 778899999999999999999999998888888899999999999999999999999888888777 6677778887754
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++.....+.+++...++++|++++++. ++++++|++|| +++++|.++|+++|+++|+++|++||++||+||+|+||||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep-v~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr 271 (472)
T 3hmu_A 193 WAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEP-VQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGR 271 (472)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS-SBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcc
Confidence 331111344555556689999999754 35799999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|.+++++.+++.||++||||+|+||++|+|++++++++++.+.. +.+.+++||++|+++++++.++|+.++++++
T Consensus 272 ~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~----~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~ 347 (472)
T 3hmu_A 272 TGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGK----DEFNHGYTYSGHPVAAAVALENLRILEEENI 347 (472)
T ss_dssp TSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTT----SCBCCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred cCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhccc----CCccccCCCCCCHHHHHHHHHHHHHHHHhHH
Confidence 998888888999999999999999987899999999999988832 3467889999999999999999998888899
Q ss_pred HHHHH-HHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc-------hhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 331 LQRIS-QDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI-------ETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 331 ~~~~~-~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
.++++ ++.+++++.|+++..++.+..+++.|+|+++++. .+.... ...+..+++.|+++||++.++++++|
T Consensus 348 ~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iR 426 (472)
T 3hmu_A 348 LDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALT-PNKASRAKFASEPGTIGYICRERCFANNLIMRHVGDRMI 426 (472)
T ss_dssp HHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEEC-SCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEe-cCccccccccchhHHHHHHHHHHHHHCCcEEEecCCEEE
Confidence 99999 9999999999988667888899999999999987 542211 22356889999999999999889999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.+|+++|++++++|++++.++.
T Consensus 427 i~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 427 ISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988653
No 5
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=1.3e-64 Score=491.53 Aligned_cols=372 Identities=18% Similarity=0.254 Sum_probs=322.3
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|+++.+++|+ |+||.|||+||||.++||+.+|||+||+|++|++++++++.+. ...++...++++.|++.
T Consensus 66 ~~~~P~~i~~a~G~---~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~---~~~~~~~~~lae~l~~~ 139 (454)
T 4ao9_A 66 YAPFPLTIARGEGA---ALWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINL---TGHNLLEGRLARLICER 139 (454)
T ss_dssp CSSCCCEEEEEETT---EEEETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCC---CSEESSHHHHHHHHHHH
T ss_pred cCCCCccEEEeecC---EEEECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCc---cCCcHHHHHHHHHHHHh
Confidence 34579999999998 7999999999999999999999999999999999999875432 34456677899999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
+| +.++++|++||+|||+.|+|+++.++ +|++||.++++|||++....+.+....+ ..+....|+
T Consensus 140 ~p-~~~~v~f~~SGsEA~e~AiklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~-------~~~~~~~p~- 204 (454)
T 4ao9_A 140 FP-QIEQLRFTNSGTEANLMALTAALHFT------GRRKIVVFSGGYHGGVLGFGARPSPTTV-------PFDFLVLPY- 204 (454)
T ss_dssp ST-TCSEEEEESSHHHHHHHHHHHHHHHH------TCCEEEEETTCBCSTTCBBSSSBCTTSC-------CSEEEEECT-
T ss_pred CC-CCCEEEEeCchHHHHHHHHHHHHhcc------cCCeEEEEeCCcCCccccccccccCccC-------CCCcccCCC-
Confidence 98 78999999999999999999999987 8999999999999998776655443221 112223333
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 170 DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+|++++++.++++++++++||+|| +++++|.++|+++||++|+++|++||++||+|||++|
T Consensus 205 ----------------nd~~~l~~~l~~~~~~iAavIvEP-v~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-- 265 (454)
T 4ao9_A 205 ----------------NDAQTARAQIERHGPEIAVVLVEP-MQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-- 265 (454)
T ss_dssp ----------------TCHHHHHHHHHHTGGGEEEEEECS-EESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--
T ss_pred ----------------chHHHHHHHHhhcCCceEEEEecc-ccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--
Confidence 389999999998878899999999 9999999999999999999999999999999999994
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
|+|.+++.+++++.||++|++|+++|| +|+|++++++++++.+.+ ..+.+.|++||++||++|++++++|+.+++++
T Consensus 266 R~G~~~a~e~~gv~PDi~t~gK~lggG-~Piga~~~~~ei~~~~~~--~~~~~~h~~T~~gnPla~AAala~L~~l~~~~ 342 (454)
T 4ao9_A 266 RLAPHGLANKLGIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFDP--RTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPE 342 (454)
T ss_dssp GGSTTCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHGGGCT--TTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHH
T ss_pred CCccccchhccCCCCcEEEeccccCCC-CcceeeeeHHHHHHHHhh--ccCCccccCCCCCCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999 699999999999998865 34567899999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCCcEEeecCCE
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNELLLRPIGNT 400 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~Gv~~~~~~~~ 400 (430)
+.+++++++++|+++|+++ .+++.+..+++.|+|+++++. .+.. ........+++.|+++||++.|.+
T Consensus 343 ~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~-~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~-- 419 (454)
T 4ao9_A 343 AAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFV-QGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG-- 419 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESC-CSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC--
T ss_pred hhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEe-cCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC--
Confidence 9999999999999999998 677878899999999999986 4321 112234678888999999998776
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.++..+|++|||+++++|++++.+.
T Consensus 420 -~~~~s~~~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 420 -FVVLSLPLTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp -EEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred -CEEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 345677899999999999999999863
No 6
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=6.5e-62 Score=480.02 Aligned_cols=396 Identities=32% Similarity=0.583 Sum_probs=344.4
Q ss_pred CceeEEeecCCceeEEEEC-CCC--EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 13 NNLVIRSLKNSWKWSLIDV-SGK--RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~-~g~--~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
.|.++.+++|. |+||. ||+ +||||++++|+++|||+||+|++|+.+++.++.+.....+.++...+++++|++.
T Consensus 54 ~~~~~~~~~G~---~l~d~~dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~ 130 (457)
T 3tfu_A 54 SPVVAVAAHGA---WLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDI 130 (457)
T ss_dssp CCEEEEEEEBT---EEEEEETTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHH
T ss_pred CCceEEeeecC---EEEEccCCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHh
Confidence 58999999988 79999 999 9999999999999999999999999999988765544467789999999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCC-CccchhhhhccCCCeeEeCC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN-IQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (430)
++.+.++|+|++||+||++.|+++++.+++.+|.+++++||+++++|||++..+++++. .+.++..+.+...+..+++.
T Consensus 131 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (457)
T 3tfu_A 131 TPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQ 210 (457)
T ss_dssp SSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECC
T ss_pred CCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecC
Confidence 98788899999999999999999999988788877889999999999999999988854 55667777777777777777
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
|.... ..+|+++|+++++++++++++|++||++++++|.++|+++++++|+++|++||++||+||+|+||
T Consensus 211 p~~~~----------~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~ 280 (457)
T 3tfu_A 211 VPRDY----------DPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGF 280 (457)
T ss_dssp CCSSC----------CHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CCccc----------CHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCC
Confidence 64221 13589999999987656899999999888999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|..++++.+++.||++||||+|+||++|+|++++++++++.+.. ...+.+.+++||++|+++++++.++|+.++++
T Consensus 281 gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~-~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~ 359 (457)
T 3tfu_A 281 GRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISA-GAAGALMHGPTFMANPLACAVSVASVELLLGQ 359 (457)
T ss_dssp TTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHH-SSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTS
T ss_pred ccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhc-cCCCceeEecCCCcCHHHHHHHHHHHHHHhhh
Confidence 99999888889999999999999999997799999999999998863 12345678999999999999999999988888
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYI 408 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~ 408 (430)
++.++++++.++++++|+++..++.+..+++.|+|+++++. .... +.++++.|+++||++.+.++++||+|++.
T Consensus 360 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~-~~~~-----~~~~~~~l~~~Gv~v~~~~~~lRi~p~~~ 433 (457)
T 3tfu_A 360 DWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECD-RPVD-----LAVATPAALDRGVWLRPFRNLVYAMPPYI 433 (457)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEES-SCCC-----HHHHHHHHHHTTEECCCBTTEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEEC-Cccc-----HHHHHHHHHHCCeEEEecCCEEEEECCCC
Confidence 99999999999999999988667778888999999999887 5321 46799999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|++++++++++|++++.++
T Consensus 434 ~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 434 CTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp CCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998764
No 7
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.8e-61 Score=478.47 Aligned_cols=413 Identities=21% Similarity=0.354 Sum_probs=359.8
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhc
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
+.|.++.+++|. |++|.||++||||++|+++++|||+||+|++|+.+++.++.+ .....+.++...+++++|++.+
T Consensus 32 ~~p~~~~~~~G~---~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~ 108 (460)
T 3gju_A 32 SPTRIMAGGEGV---TVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRA 108 (460)
T ss_dssp SCCCCEEEEEBT---EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHS
T ss_pred CCceEEEEeecc---EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhC
Confidence 455999999888 799999999999999999999999999999999999988653 2334677889999999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+.++++|+|++||+||++.|+++++.++..+|.+++++||+++++|||++..++++++.+.++..+.+...+...++.|.
T Consensus 109 ~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (460)
T 3gju_A 109 PKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPY 188 (460)
T ss_dssp CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCC
T ss_pred CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCc
Confidence 77888999999999999999999999888888889999999999999999999999998888888888888888888876
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINK-GNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~-~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.++... +.+.+++...++++|++++++. ++++++|++|| +++++|.++++++++++|+++|++||++||+||+|+||
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 267 (460)
T 3gju_A 189 YFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEP-ILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGF 267 (460)
T ss_dssp GGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred cccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 555432 4455666666789999999754 35799999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
+|+|..++++.+++.||+++|||+|++|++|+|++++++++++.+... ...+.+.+++||++++++++++.++|+.+++
T Consensus 268 gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 347 (460)
T 3gju_A 268 GRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE 347 (460)
T ss_dssp TTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred CcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999988888889999999999999999877999999999999888530 0113456889999999999999999998888
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc------hhHHHHHHHHHHHCCcEEeecC--
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI------ETFSKKFFVAALKNELLLRPIG-- 398 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~a~~~~~~l~~~Gv~~~~~~-- 398 (430)
+++.++++++.++++++|.+. ..++.+..+++.|+++++++. .+.... ...+..+++.|+++||++.+++
T Consensus 348 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 426 (460)
T 3gju_A 348 MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFV-ADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQG 426 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEEC-SBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEc-cCccccccccchHHHHHHHHHHHHHCCeEEecCCCC
Confidence 889999999999999999655 677888889999999999987 532211 1235689999999999999976
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++||+|++.+|+++|++++++|++++.++.
T Consensus 427 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 427 DILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999998764
No 8
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=1.1e-61 Score=479.88 Aligned_cols=409 Identities=25% Similarity=0.433 Sum_probs=353.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++.+++|+ |++|.||++||||++++++++|||+||+|++|+.++++++.. .....++++...+++++|++.++
T Consensus 32 ~p~~~~~~~G~---~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~ 108 (459)
T 4a6r_A 32 GARVMTRGEGV---YLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTP 108 (459)
T ss_dssp --CCEEEEEBT---EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSC
T ss_pred CCeeEEEeecC---EEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC
Confidence 57899999888 799999999999999999999999999999999999988652 33346788999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.++++|+|++||+||++.|+++++.++..+|.|++++||+++++|||++..+.++++.+.++..+.+...+..+++.|..
T Consensus 109 ~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (459)
T 4a6r_A 109 AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWW 188 (459)
T ss_dssp TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCH
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCcc
Confidence 78899999999999999999999998888888889999999999999999999999988888888888778888887764
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
++.....+.+.+...++++|++++++. ++++++|++|| +++++|.++|+++++++|+++|++||++||+||+|+||++
T Consensus 189 ~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr 267 (459)
T 4a6r_A 189 YKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEP-IQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGR 267 (459)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 331111344555555689999999754 35799999999 9999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 251 ~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
+|..++++.+++.||++||||+++||++|+|++++++++++.+.. .+.+.+++||++++++++++.++|+.++++++
T Consensus 268 ~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~---~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 344 (459)
T 4a6r_A 268 TGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIA---GGDFNHGFTYSGHPVCAAVAHANVAALRDEGI 344 (459)
T ss_dssp TSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHH---HCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCH
T ss_pred ccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhc---CCCcccCCCCCCCHHHHHHHHHHHHHHhcchH
Confidence 998888888899999999999999987899999999999988873 12356788999999999999999998888899
Q ss_pred HHHHH-HHHHHHHHHH-HchhcCCCeeeEeecceEEEEEEeecCCcc------chhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 331 LQRIS-QDMKKITKAL-TSLITHPKIINFRQKGMIWAFDVIIEDPEQ------IETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 331 ~~~~~-~~~~~l~~~l-~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
.++++ ++.+++++.| +.+..++.+..+++.|+|+++++. .+..+ ....+..+++.|+++||++.++++++|
T Consensus 345 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iR 423 (459)
T 4a6r_A 345 VQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLV-KNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIV 423 (459)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEEC-SBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEe-cCccccccccchHHHHHHHHHHHHHCCeEEecCCCEEE
Confidence 99999 9999999999 777777888889999999999987 53221 112356899999999999999889999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.+|++++++++++|++++.++.
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 424 SAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998764
No 9
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=2.9e-61 Score=475.52 Aligned_cols=413 Identities=37% Similarity=0.680 Sum_probs=336.8
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
...|.++.+++|+ |+||.||++||||.++++++++||+||+|++|+.++++++.+.....+.++...+++++|++.+
T Consensus 24 ~~~p~~~~~g~G~---~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~ 100 (448)
T 3dod_A 24 DENPLIIESGTGI---KVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDIS 100 (448)
T ss_dssp HHSCCEEEEEEBT---EEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHS
T ss_pred cCCCceEEEeeeC---EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC
Confidence 3468999999888 7999999999999999999999999999999999999887554445677889999999999999
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
+.+.++|+|++||+||++.|+++++.++..+|.+++++||+++++|||++..+..+++.+.++..+.+...+...++.|+
T Consensus 101 ~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (448)
T 3dod_A 101 PKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY 180 (448)
T ss_dssp CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCC
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc
Confidence 87788999999999999999999998765666666899999999999999999988888878888888777888888888
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccc-cCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQ-CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~-~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
.++.+ +...+.+..+|+++|+++++++++++++|++|| ++ +++|.++++++++++|+++|++||++||+||+|+||+
T Consensus 181 ~~~~~-~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g 258 (448)
T 3dod_A 181 VYRSE-SGDPDECRDQCLRELAQLLEEHHEEIAALSIES-MVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFG 258 (448)
T ss_dssp CTTSS-SCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEES-SEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred cccCC-ccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeC-cccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 87776 666677788899999999985556899999999 98 9999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
++|..++++.+++.||++||||++++|++|+|++++++++++.+... ...+.+.+++|+++++++++++.++|+.++++
T Consensus 259 ~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 338 (448)
T 3dod_A 259 RTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESE 338 (448)
T ss_dssp TTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcc
Confidence 99988888889999999999999999856999999999999887530 01334668899999999999999999988878
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccch------hHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIE------TFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
++.++++++.+++++.|+++..++.+..+++.|.++++++. .+..... ..+..+++.|+++||++.|.++.+|
T Consensus 339 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~iR 417 (448)
T 3dod_A 339 NIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELV-RSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIA 417 (448)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEEC-SBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEETTEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEc-cCcccccccchhhHHHHHHHHHHHHCCcEEeccCCEEE
Confidence 89999999999999999887667777788999999999987 5322111 0136789999999999999999999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.+|+++|++++++|++++.+++
T Consensus 418 i~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 418 FLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998775
No 10
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=6.9e-60 Score=466.43 Aligned_cols=408 Identities=28% Similarity=0.470 Sum_probs=354.3
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|+ |++|.||++||||++++++++|||+||+|++|+.++++++.+ ....+.++...+++++|++.++
T Consensus 30 ~~p~~~~~~~G~---~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~~ 105 (452)
T 3n5m_A 30 NSTTVGAKAEGC---WVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FPMSQSHEPAIKLAEKLNEWLG 105 (452)
T ss_dssp GGCCEEEEEEBT---EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CCTTSEEHHHHHHHHHHHHHHT
T ss_pred CCCceEEEeeeC---EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cccccCCHHHHHHHHHHHHhCC
Confidence 578999999888 799999999999999999999999999999999999988655 3446778999999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+.+ |+|++||+||++.|+++++.++..+|.+++++||+++++|||++..+.++++.+.++..+.+...+..+++.|+.
T Consensus 106 ~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (452)
T 3n5m_A 106 GEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC 184 (452)
T ss_dssp SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT
T ss_pred CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc
Confidence 6666 999999999999999999987666777788999999999999999999999888888888888788888888877
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHH-hCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLK-KNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~-~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++.+.+.+.+.+...++++|+++++ .+++++++|++|| + +| +|.++|+++++++|+++|++||++||+||+|+||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep-~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 262 (452)
T 3n5m_A 185 YRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEP-IITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFG 262 (452)
T ss_dssp TTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECS-SBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred ccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEcc-ccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCC
Confidence 7766544444444556999999997 3346899999999 8 89 99999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
++|..++++.+++.||++||||++++|++|+|++++++++++.+......+.+.+++|+++++++++++.++|+.+++++
T Consensus 263 ~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 342 (452)
T 3n5m_A 263 RTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENEN 342 (452)
T ss_dssp TTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTT
T ss_pred cccccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 99988888999999999999999999868999999999999887531123456688999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc----hhHHHHHHHHHHHCCcEEeecC------
Q psy14484 330 ILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI----ETFSKKFFVAALKNELLLRPIG------ 398 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~a~~~~~~l~~~Gv~~~~~~------ 398 (430)
+.++++++.+++++.|+++ ..++.+..+++.|+++++++. .+.... ...+..+++.|+++||++.+++
T Consensus 343 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 421 (452)
T 3n5m_A 343 LIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELV-NDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGY 421 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEE-EETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEe-cCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCC
Confidence 9999999999999999887 677888889999999999886 432211 1224678999999999999874
Q ss_pred -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 399 -NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 -~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++||+|++.+|+++|++++++|++++.+
T Consensus 422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 422 NNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999998865
No 11
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=4.6e-59 Score=459.80 Aligned_cols=399 Identities=26% Similarity=0.403 Sum_probs=345.5
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ |+||.||++||||++++++++|||+||+|++|+.++++++.++....+.++...+++++|++.+
T Consensus 44 ~~~p~~~~~~~G~---~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~ 120 (453)
T 4ffc_A 44 STAPVYAVDADGG---VIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALT 120 (453)
T ss_dssp CSCSSCEEEEETT---EEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCceEEeeecC---EEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhC
Confidence 3678999999998 7999999999999999999999999999999999999887655445678899999999999998
Q ss_pred CCC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCC
Q psy14484 91 QYK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (430)
+.. .++|+|++||+||++.|+++++.++ ++++||+++++|||++..++++++.. .++..+.++..++..+++
T Consensus 121 ~~~~~~~v~~~~sGseA~~~alk~a~~~~------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (453)
T 4ffc_A 121 PGDHDKRTALFNSGAEAVENAIKVARLAT------GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPA 194 (453)
T ss_dssp SCSSCEEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECC
T ss_pred CCCCCcEEEEeCcHHHHHHHHHHHHHHhc------CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCC
Confidence 744 5799999999999999999998764 78999999999999999999888765 677778887778888888
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
|..++.+.+.+.++....+++.|++.+. ++++++|++|| +++++|.++++++|+++|+++|++||++||+||+|+||
T Consensus 195 ~~~~~~~~g~~~~~~~~~~~~~l~~~i~--~~~~aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 271 (453)
T 4ffc_A 195 SYPLRDEPGLTGEEAARRAISRIETQIG--AQSLAAIIIEP-IQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGF 271 (453)
T ss_dssp CCTTTSCTTCCHHHHHHHHHHHHHHHTC--GGGEEEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CccccCccccchHHHHHHHHHHHHHhcC--CCCEEEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCC
Confidence 8665554444433333335677777664 35799999999 99999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|..++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+++|+++++++++++.++|+.++++
T Consensus 272 g~~g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~------~~~~~t~~~~~~~~aaa~aal~~~~~~ 344 (453)
T 4ffc_A 272 ARTGAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYA------GGLGGTYGGNPVTCAAAVAALGVMREL 344 (453)
T ss_dssp TTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT------TSSCCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred CcccccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcc------cCcCCCCCcCHHHHHHHHHHHHHhhhh
Confidence 9999888888899999999999999998 899999999999888765 347899999999999999999988778
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC--ccchhHHHHHHHHHHHCCcEEeecC---CEEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPIG---NTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR 402 (430)
++.++++++.+++++.|+++ ..++.+..+++.|+++++++. ... ......+..+++.|+++||++.+++ +.+|
T Consensus 345 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR 423 (453)
T 4ffc_A 345 DLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIV-KPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIR 423 (453)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEB-CTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEe-cCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEE
Confidence 99999999999999999887 677888888999999999986 411 1122235789999999999998864 7999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.+++++|++++++|++++.++.
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 424 LLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 12
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=2e-61 Score=502.56 Aligned_cols=413 Identities=26% Similarity=0.457 Sum_probs=335.6
Q ss_pred CceeEEeecCCceeEEEECCCC----EEEecccccccccCCCC-CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGK----RYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~----~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (430)
.|+++.+++|. |+|+||.||+ +||||+++||++++||+ ||+|.+|+++|+.++.+.+...+.++...+|+++|+
T Consensus 356 ~p~~i~~a~G~-g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~ 434 (831)
T 4a0g_A 356 TVTVIDSRCGE-NFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLL 434 (831)
T ss_dssp GCEEEEEEETT-EEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHH
T ss_pred CCeEEEEeecc-ceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHH
Confidence 57899999985 5689999999 99999999999999999 999999999999998776555677899999999999
Q ss_pred hhcCCC-CCeEEEcCCchHHHHHHHHHH-HHhhhhcCCC--------CCcEEEEEcCCCCCcchhhhccCCCccchhh--
Q psy14484 88 SLTQYK-LGHCFYGSDGASAVEVALKMS-FHYWYNKGFL--------NKKKFICLQNSYHGETLGALAVTNIQSFKEI-- 155 (430)
Q Consensus 88 ~~~~~~-~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~--------~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~-- 155 (430)
+..|.+ .++++|++||+|||+.|+|++ +.++..+|.+ +|.+||.++++|||.+.+++++++.+.|+..
T Consensus 435 ~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~ 514 (831)
T 4a0g_A 435 DGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQ 514 (831)
T ss_dssp HTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTT
T ss_pred HhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccc
Confidence 999744 789999999999999999999 5677777753 5789999999999999999999987766541
Q ss_pred ------hhccC--------CCeeEeCCCCCCCCCC-C----CC----------hhHHHHHHHHHHHHHHHh-----CCCC
Q psy14484 156 ------YTSLL--------NKTYIITTPDSRNINK-G----NS----------ANEIARCAIFDLEILLKK-----NHNK 201 (430)
Q Consensus 156 ------~~~~~--------~~~~~~~~~~~~~~~~-~----~~----------~~~~~~~d~~~le~~l~~-----~~~~ 201 (430)
+.+.. .+..+++.|+.++... + .+ ..+.....+++|++.|++ .+++
T Consensus 515 ~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~ 594 (831)
T 4a0g_A 515 QPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAH 594 (831)
T ss_dssp CTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CE
T ss_pred cccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCc
Confidence 11110 1234455665443321 0 01 111223356788888863 3578
Q ss_pred eEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCcccc
Q psy14484 202 IAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPL 280 (430)
Q Consensus 202 ~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~i 280 (430)
+++||+|| + ++++|.++|+++|+++|+++|++||++||+||||+||||+|.+|+++++++.||++|+||+|+|||+|+
T Consensus 595 iaavi~Ep-vvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Pl 673 (831)
T 4a0g_A 595 VGALIIEP-VIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPL 673 (831)
T ss_dssp EEEEEECC-SEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCC
T ss_pred EEEEEEec-ccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCc
Confidence 99999999 6 999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred EEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH----HH-HchhcCCCee
Q psy14484 281 SLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK----AL-TSLITHPKII 355 (430)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~----~l-~~l~~~~~~~ 355 (430)
|++++++++++.+....+.+.+.|++||+++|++|++++++|++++++++.++++++++++++ .+ +.+..++.+.
T Consensus 674 gav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~ 753 (831)
T 4a0g_A 674 AVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQ 753 (831)
T ss_dssp EEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEE
T ss_pred EEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 999999999998875333456779999999999999999999999887777777655555432 23 3335568888
Q ss_pred eEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 356 NFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++.|+|+++++. .+... ....+..+.+.|+++||++.|.++.+||+|++.+|+++|++++++|++++.++
T Consensus 754 ~vrg~Gl~~~iel~-~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 754 RVVVIGTLFALELK-ADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp EEEEETTEEEEEEC----------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred eEeecccEEEEEEe-cCccccccchHHHHHHHHHHHHCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999997 54210 11235679999999999999999999999999999999999999999988754
No 13
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=1.6e-58 Score=455.93 Aligned_cols=398 Identities=26% Similarity=0.391 Sum_probs=340.0
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|. |+||.||++||||.+++++++|||+||+|++|+.+++.++.+.....+.++...+++++|++.++
T Consensus 42 ~~p~~~~~g~G~---~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~ 118 (451)
T 3oks_A 42 TMPVYAVRAGGG---IVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTP 118 (451)
T ss_dssp SCSSCEEEEETT---EEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSS
T ss_pred CCCceEEEeecC---EEEECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCC
Confidence 678999999988 79999999999999999999999999999999999998876554456788999999999999987
Q ss_pred CC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCC
Q psy14484 92 YK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 169 (430)
.. .++++|++||+||++.|+++++.++ ++++||+++++|||++..++++++.. .++..+.+...++.++++|
T Consensus 119 ~~~~~~v~~~~sGseA~~~Alk~a~~~~------g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T 3oks_A 119 VRGDKRSALFNSGSEAVENAVKIARSHT------HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLS 192 (451)
T ss_dssp CCSSEEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCC
T ss_pred cCCCCEEEEeCcHHHHHHHHHHHHHHhc------CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCC
Confidence 43 5799999999999999999999864 78999999999999999999888764 6777787777788888877
Q ss_pred CCCCCCC-CCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 170 DSRNINK-GNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
..++.+. +.+.+.+...+++.+++.+++. ++++++|++|| +++++|.+.++++|+++|+++|++||++||+||+|+
T Consensus 193 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 271 (451)
T 3oks_A 193 YPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEP-IQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT 271 (451)
T ss_dssp CHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 4333211 1121122223566666666542 36799999999 999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
||+++|..++++.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+++++++++++.++|+.++
T Consensus 272 g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~aal~~~~ 344 (451)
T 3oks_A 272 GFARTGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHV------SGLGGTYGGNPIACAAALATIETIE 344 (451)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCT------TSBCCSSSSCHHHHHHHHHHHHHHH
T ss_pred CCCccccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcC------CCcCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999888889999999999999999998 899999999999887764 3488999999999999999999887
Q ss_pred hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCC--ccchhHHHHHHHHHHHCCcEEeecC---CE
Q psy14484 327 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDP--EQIETFSKKFFVAALKNELLLRPIG---NT 400 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~a~~~~~~l~~~Gv~~~~~~---~~ 400 (430)
++++.++++++.+++++.|+++ ..++.+..+++.|+++++++. +.. ......+..+++.|+++||++.+++ +.
T Consensus 345 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 423 (451)
T 3oks_A 345 SEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELV-KAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNV 423 (451)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEB-STTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEe-cCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCE
Confidence 7899999999999999999887 677888889999999999986 411 0122235789999999999999864 79
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+||+|++.+++++|++++++|++++.+
T Consensus 424 iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 424 VRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998864
No 14
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=2.8e-57 Score=445.06 Aligned_cols=410 Identities=25% Similarity=0.422 Sum_probs=328.9
Q ss_pred CcccccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHH
Q psy14484 1 MNNIVYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI 80 (430)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
|++++. .+...|.++.+++|+ +++|.||++||||.+++++++|||++|+|++++.+++++..+.....++++...
T Consensus 1 ~~~~~~--~~~~~~~~~~~~~G~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 3i4j_A 1 MSNVFY--RSSKPYPVAVRGEGV---FLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLE 75 (430)
T ss_dssp --CBCC--SSSSCCCEEEEEEBT---EEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHH
T ss_pred CCcccc--CCCCCCceEEeeecC---EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHH
Confidence 566653 336688999999888 799999999999999999999999999999999999988765554567888999
Q ss_pred HHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccC
Q psy14484 81 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLL 160 (430)
Q Consensus 81 ~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 160 (430)
+++++|++.++.++++|+|++||+||++.|+++++.++..+|.++++.||+++++|||++..+..+++.+.++..+.++.
T Consensus 76 ~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 155 (430)
T 3i4j_A 76 EYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLM 155 (430)
T ss_dssp HHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------
T ss_pred HHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcC
Confidence 99999999998788999999999999999999999887777777889999999999999988888877766666666666
Q ss_pred C--CeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEcccccc-CCCcccCChHHHHHHHHHHHhcC
Q psy14484 161 N--KTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQC-AGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~-~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
. +...+++++.++. ...|+++|++++++.. +++++|++|| +++ ++|.++++++++++|.++|++||
T Consensus 156 ~~~~~~~~~~~~~~~~---------~~~~~~~le~~l~~~~~~~~~~vi~~p-~~~~~~G~~~~~~~~l~~l~~l~~~~~ 225 (430)
T 3i4j_A 156 RPEAWPKLPKPDPARN---------GAEDAEGLRALLEREGPETVAAFMAEP-VVGASDAALAPAPGYYERVRDICDEAG 225 (430)
T ss_dssp CGGGSCEECCCCTTSC---------HHHHHTHHHHHHHHHCGGGEEEEEECS-SCCGGGTTCCCCTTHHHHHHHHHHHHT
T ss_pred CCCCceEcCCCcccch---------hhHHHHHHHHHHHhcCCCCEEEEEEcC-cccCcCCcccCCHHHHHHHHHHHHHcC
Confidence 6 6677777654432 1237889999997642 5799999999 999 99999999999999999999999
Q ss_pred CEEEEeccccCCCCcccccccccC-CCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHH
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHA-EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLAC 315 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 315 (430)
++||+||+|+||+++|..++++.+ ++.||+++|||++++|++|+|++++++++++.+.. ..+.+.+++|++++++++
T Consensus 226 ~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~--~~~~~~~~~t~~~~~~~~ 303 (430)
T 3i4j_A 226 IIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMG--GSGAFMHGFTYAGHPVSV 303 (430)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHH--TTCBCCCCCTTTTCHHHH
T ss_pred CEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhc--cCCcccccCCCCCCHHHH
Confidence 999999999999999988888888 99999999999999986899999999999988875 223456889999999999
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccc-----hhHHHHHHHHHHH
Q psy14484 316 CAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQI-----ETFSKKFFVAALK 389 (430)
Q Consensus 316 ~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~a~~~~~~l~~ 389 (430)
+++.++|+.++++++.++++++.+++++.|+++ ..++.+..+++.|+++++++. +.. .. ...+.++++.|++
T Consensus 304 aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~ 381 (430)
T 3i4j_A 304 AAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG-DLA-TGQAFETPGIASRIGAAALK 381 (430)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC--------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEec-ccc-ccCCCccHHHHHHHHHHHHh
Confidence 999999998877889999999999999999887 577888888999999999886 321 11 1113679999999
Q ss_pred CCcEEeec--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 390 NELLLRPI--------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 390 ~Gv~~~~~--------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+||++.++ ++++||++++.++++++++++++|++++++++
T Consensus 382 ~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 382 RGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp TTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999886 57899999999999999999999999998875
No 15
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.5e-54 Score=419.33 Aligned_cols=380 Identities=29% Similarity=0.479 Sum_probs=334.3
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
+..+.+.|.++.+++|+ ++||.||++||||.+++++++|||+||+|++++.+++++..+.. ..+.++...++++++
T Consensus 12 ~~~~~~~~~~~~~~~G~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l 87 (395)
T 3nx3_A 12 IPTYKRFDIVLEKGQGV---YLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS-NLYYNENIAAAAKNL 87 (395)
T ss_dssp BCGGGSCSCBEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC-TTSBCHHHHHHHHHH
T ss_pred hhccCCCCceEEeeeee---EEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHH
Confidence 34566789999999888 79999999999999999999999999999999999998765433 346788999999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.++ .++++|++||+||++.|+++++.++..+| +++++||+++++|||++..+...++.+.++..+.+...+...+
T Consensus 88 a~~~~--~~~v~~~~gg~ea~~~al~~~~~~~~~~g-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (395)
T 3nx3_A 88 AKASA--LERVFFTNSGTESIEGAMKTARKYAFNKG-VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA 164 (395)
T ss_dssp HHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTT-CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE
T ss_pred HHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhccC-CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe
Confidence 99984 78999999999999999999987755544 3678999999999999999998888777777777777777777
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
+++ |+++|+++++ +++++|+++| +++++|.++|+++++++|.++|++||++||+||+|+
T Consensus 165 ~~~-----------------d~~~l~~~l~---~~~~~v~~~~-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~ 223 (395)
T 3nx3_A 165 KYN-----------------DISSVEKLVN---EKTCAIILES-VQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC 223 (395)
T ss_dssp CTT-----------------CHHHHHTTCC---TTEEEEEEES-EECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCC-----------------CHHHHHHhcc---CCeEEEEEeC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 654 7899998885 6799999999 999999999999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHH-HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKI-YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
||+++|..++.+.+++.||+++|||++++| +|+|++++++++ ++.+.. ..++.|+++++++++++.++|+.+
T Consensus 224 ~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~aal~~~ 296 (395)
T 3nx3_A 224 GMGRSGKFFAYEHAQILPDIMTSAKALGCG-LSVGAFVINQKVASNSLEA------GDHGSTYGGNPLVCAGVNAVFEIF 296 (395)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEECGGGTTT-SCCEEEEECHHHHHHHSCT------TCCSSCBSCCHHHHHHHHHHHHHH
T ss_pred CCCcCCcchhHHhcCCCCCEEEecccccCC-CceEEEEEchhhhhhhcCC------cccCCCCCCCHHHHHHHHHHHHHH
Confidence 999999888888889999999999999988 799999999998 777765 357789999999999999999988
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEE
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYL 403 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~ 403 (430)
+++++.++++++.+++++.|+++ ..++.+..+++.|.++++++. +... +..+.+.|+++||++.++ ++++||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-----~~~~~~~l~~~Gi~v~~~~~~~iRi 370 (395)
T 3nx3_A 297 KEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLD-KSVK-----VAKVIQKCQENALLLISCGENDLRF 370 (395)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC-TTSC-----HHHHHHHHHHTTEECEEETTTEEEE
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeC-Ccch-----HHHHHHHHHHCCCEEecCCCCEEEE
Confidence 77889999999999999999887 567777778899999999887 5311 467899999999999987 489999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+|++.+|++++++++++|++++++
T Consensus 371 ~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 371 LPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998865
No 16
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=9.4e-54 Score=420.24 Aligned_cols=381 Identities=27% Similarity=0.414 Sum_probs=322.5
Q ss_pred cCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhh
Q psy14484 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (430)
+.+.|.++.+++|. ++||.||++||||.+|+++.+|||+||+|++|+.+++++..+... .+.++...++++.|++.
T Consensus 55 ~~~~~~~~~~~~G~---~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~-~~~~~~~~~l~~~la~~ 130 (439)
T 2oat_A 55 YHPLPVALERGKGI---YLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSR-AFYNNVLGEYEEYITKL 130 (439)
T ss_dssp CCCCSCEEEEEEBT---EEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCT-TSEESSHHHHHHHHHHH
T ss_pred cCCCCeeEEeeecC---EEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHHh
Confidence 34568889999887 799999999999999999999999999999999999987654322 35567788999999999
Q ss_pred cCCCCCeEEEcCCchHHHHHHHHHHHHhhh-hcC-CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWY-NKG-FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 90 ~~~~~~~v~~~~sgteA~~~al~~~~~~~~-~~g-~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
+ +.++++|++||+||++.|+++++.+.. .+| .+++++||+++++|||++..++..++.+.++..+.++..++..++
T Consensus 131 ~--g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~ 208 (439)
T 2oat_A 131 F--NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP 208 (439)
T ss_dssp H--TCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEEC
T ss_pred c--CCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeC
Confidence 8 578999999999999999999886432 122 235589999999999998877777765555555666656666665
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
++ |+++|+++++ .+++++|++|| +++++|.++++++++++|.++|++||++||+||+|+|
T Consensus 209 ~~-----------------d~~~le~~l~--~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g 268 (439)
T 2oat_A 209 YN-----------------DLPALERALQ--DPNVAAFMVEP-IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTG 268 (439)
T ss_dssp SS-----------------CHHHHHHHTT--STTEEEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred CC-----------------CHHHHHHHhC--CCCEEEEEEEC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 54 7899999985 25799999999 9999998999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|+++|..++++.+++.||+++|||++++|++|+|++++++++++.+.. ..+++||++++++++++.++|+.+++
T Consensus 269 ~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~------~~~~~t~~~~~~~~aaa~aal~~~~~ 342 (439)
T 2oat_A 269 LARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP------GEHGSTYGGNPLGCRVAIAALEVLEE 342 (439)
T ss_dssp TTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT------TSSCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred CccCCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC------CCcccCCCcCHHHHHHHHHHHHHHhh
Confidence 999998888888899999999999999885799999999998877754 34678999999999999999998877
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCC
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPP 406 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~ 406 (430)
+++.++++++++++++.|+++ .++.+..+++.|.++++++. .+.... +.++++.|+++||++.+. ++++||+|+
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~-~~~~~~---~~~l~~~l~~~Gv~v~~~~~~~iRi~~~ 417 (439)
T 2oat_A 343 ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIK-ETKDWD---AWKVCLRLRDNGLLAKPTHGDIIRFAPP 417 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEEC-CCSSCC---HHHHHHHHHHTTEECCBSSSSEEEECCC
T ss_pred hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEe-cCccHH---HHHHHHHHHHCCeEEecCCCCEEEEECc
Confidence 789999999999999999887 45655567889999999887 531111 357999999999999986 489999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+.++++++++++++|++++.+
T Consensus 418 ~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 418 LVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998875
No 17
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=8.4e-54 Score=420.82 Aligned_cols=378 Identities=19% Similarity=0.260 Sum_probs=315.0
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|+ ++||.||++||||.+++|+++|||+||+|++|+.+++.+.. .+.++++...+++++|++.++
T Consensus 36 ~~p~~~~~~~G~---~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~ 109 (434)
T 3l44_A 36 GAPIAMERGKGA---YFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGV---LYGTPTALEVKFAKMLKEAMP 109 (434)
T ss_dssp SCCCCEEEEEBT---EEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCS---CCSSCCHHHHHHHHHHHHHCT
T ss_pred CCCceEEEeecC---EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc---CCCCCCHHHHHHHHHHHHhCC
Confidence 678999999888 79999999999999999999999999999999999998743 235778899999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh--h-----ccCCCee
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY--T-----SLLNKTY 164 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~--~-----~~~~~~~ 164 (430)
++++++|++||+||++.|+++++.+. ++++||+++++|||++..++..++........ . .......
T Consensus 110 -~~~~v~~~~sGsea~~~ai~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 182 (434)
T 3l44_A 110 -ALDKVRFVNSGTEAVMTTIRVARAYT------GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVI 182 (434)
T ss_dssp -TCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEE
T ss_pred -CCCEEEEeCchHHHHHHHHHHHHHhh------CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceE
Confidence 78999999999999999999998764 78899999999999988777766532211000 0 0001222
Q ss_pred EeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 165 IITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
.+++ +|+++|+++++++++++++|++|| +++++|.+.|+++++++|.++|++||++||+||+
T Consensus 183 ~~~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv 244 (434)
T 3l44_A 183 TVPF-----------------NNVETLKEALDKWGHEVAAILVEP-IVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEV 244 (434)
T ss_dssp EECT-----------------TCHHHHHHHHHHHGGGEEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECT
T ss_pred ecCc-----------------ccHHHHHHHHHhCCCCEEEEEEcC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 3322 278999999987656899999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|+|| ++|..++++.+++.||+++|||++++| +|+|++++++++++.+.. .....+++|+++++++++++.++|+.
T Consensus 245 ~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~---~~~~~~~~t~~~~~~a~aaa~aal~~ 319 (434)
T 3l44_A 245 ITAF-RFMYGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAP---LGPAYQAGTMAGNPASMASGIACLEV 319 (434)
T ss_dssp TTTT-TSSSSCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT---TSSBCCCCTTTTCHHHHHHHHHHHHH
T ss_pred ccce-eccccHHHHHcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhcc---CCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 9999 888877788889999999999999988 799999999999888764 23356788999999999999999998
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCCcEEe
Q psy14484 325 FNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~Gv~~~ 395 (430)
++++++.++++++.+++++.|+++ ..++.+..+++.|.++.+++. .... .....+..+++.|+++||++.
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~ 398 (434)
T 3l44_A 320 LQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFT-TNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLA 398 (434)
T ss_dssp HTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEES-SSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECC
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEe-cCcccchhhccccCHHHHHHHHHHHHHCCeEEe
Confidence 877889999999999999999887 556666678899999999885 3211 011224678999999999999
Q ss_pred ecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 396 PIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 396 ~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++ +.+|+ ++.+|++++++++++|++++.++
T Consensus 399 ~~~~~~~rl--~~~~t~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 399 PSKYEAWFL--TTEHTKEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp SSTTCCEEC--CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcEEE--ecccCHHHHHHHHHHHHHHHHHH
Confidence 875 56676 67899999999999999998865
No 18
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=9.5e-54 Score=419.63 Aligned_cols=382 Identities=26% Similarity=0.390 Sum_probs=305.9
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT 90 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (430)
.+.|.++.+++|+ ++||.||++||||.+|+++.+|||+||+|++|+.++++++.+.. ..+.++...++++.|++.+
T Consensus 45 ~~~~~~~~~~~g~---~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~ 120 (433)
T 1z7d_A 45 DPIPVVLKRAKGV---FVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICS-RAFFSVPLGICERYLTNLL 120 (433)
T ss_dssp CCEEEEEEEEEBT---EEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCC-TTSEEHHHHHHHHHHHHHH
T ss_pred CCCCceEEeeecC---EEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCcc-CCcCCHHHHHHHHHHHhhc
Confidence 3457888999887 79999999999999999999999999999999999998765432 2456788899999999998
Q ss_pred CCCCCeEEEcCCchHHHHHHHHHHHHhhh-hcC-CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 91 QYKLGHCFYGSDGASAVEVALKMSFHYWY-NKG-FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 91 ~~~~~~v~~~~sgteA~~~al~~~~~~~~-~~g-~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
+.++++|++||+||++.|+++++.+.. .+| .+++++||+++++|||++..++.+++.+.++..+.++..++..+++
T Consensus 121 --g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~ 198 (433)
T 1z7d_A 121 --GYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY 198 (433)
T ss_dssp --TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT
T ss_pred --CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC
Confidence 578999999999999999999875421 222 1356899999999999987777766655555555555555556554
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|+++++ .+++++|++|| +++++|.++++++++++|.++|++||++||+||+|+||
T Consensus 199 ~-----------------d~~~le~~l~--~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 258 (433)
T 1z7d_A 199 D-----------------DLEALEEELK--DPNVCAFIVEP-IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGL 258 (433)
T ss_dssp T-----------------CHHHHHHHHT--STTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred C-----------------CHHHHHHHhC--CCCEEEEEEEC-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCC
Confidence 3 7899999995 25799999999 99999988999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|..++++.+++.||+++|||++++|++|+|++++++++++.+.. ..++.||++++++++++.++|+.++++
T Consensus 259 g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~------~~~~~t~~~~~~~~aaa~aal~~~~~~ 332 (433)
T 1z7d_A 259 GRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP------GEHGSTYGGNPLAASICVEALNVLINE 332 (433)
T ss_dssp TTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT------TCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred CcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc------ccccccCCCCHHHHHHHHHHHHHHHhc
Confidence 99998888888899999999999999885799999999998877754 346789999999999999999988777
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCC
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPP 406 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~ 406 (430)
++.+++++++++++++|+++ ..++.+..+++.|.++++++. .+.. . +.++++.|+++||++.++ ++++|++|+
T Consensus 333 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~-~~~~--~--~~~~~~~l~~~Gv~v~~~~~~~iRi~~~ 407 (433)
T 1z7d_A 333 KLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFK-NELV--N--VLDICLKLKENGLITRDVHDKTIRLTPP 407 (433)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEEC-TTTC--C--HHHHHHHHHHTTEECCEETTTEEEECCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEc-cChh--H--HHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence 89999999999999999887 466766678889999999887 5311 1 367999999999999987 589999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+.++++++++++++|++++.++.
T Consensus 408 ~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 408 LCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987753
No 19
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=7.7e-54 Score=422.89 Aligned_cols=411 Identities=26% Similarity=0.430 Sum_probs=338.1
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccC-CCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS-NLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~ 91 (430)
.|+++.+++|+ ++||.+|++|+||.+++|++++||++|+|++|+.+++.+.. .... .+..+...++++.|++.++
T Consensus 32 ~~~~~~~~~g~---~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~ 107 (449)
T 3a8u_X 32 DPRLIVAAEGS---WLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD-YSPGFQYGHPLSFQLAEKITDLTP 107 (449)
T ss_dssp SCCCEEEEEBT---EEEETTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS-CCCSSSCCCHHHHHHHHHHHTTSS
T ss_pred CCceEEeeecC---EEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC-CccccccCCHHHHHHHHHHHHhCC
Confidence 58899999887 79999999999999999999999999999999999987754 2222 5777888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.++++|+|++||+||++.|+++++.+++.+|.+++++||+++++|||++..++..++.+.++..+.+...+...++.|..
T Consensus 108 ~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~ 187 (449)
T 3a8u_X 108 GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLL 187 (449)
T ss_dssp TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCcc
Confidence 77889999999999999999999887777777788899999999999988777777666566666666666777776653
Q ss_pred CCCCC-CCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 172 RNINK-GNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 172 ~~~~~-~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
++..+ +.+.+.+...++++|++++++++ +++++|++|| +++++|.++++++++++|.++|++||++||+||+|+||+
T Consensus 188 ~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p-~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g 266 (449)
T 3a8u_X 188 ASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEP-LAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFG 266 (449)
T ss_dssp GGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred ccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcC-ccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcc
Confidence 32211 11212223335899999997543 5789999999 999999889999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccC---CcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKN---NINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~---~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
++|..+.++.+++.||++++||++++|++|+|++++++++++.+.... ....+.++.|+++++++++++.++|+.++
T Consensus 267 ~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~ 346 (449)
T 3a8u_X 267 RTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQ 346 (449)
T ss_dssp TTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred ccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHH
Confidence 988767777788899999999999988679999999999988876511 01233567899999999999999999887
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCC
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPP 406 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~ 406 (430)
++++.++++++.++++++|+++..++.+..+++.|.++++++. ............+.+.|+++||++.++++++||+|+
T Consensus 347 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRis~~ 425 (449)
T 3a8u_X 347 KENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIA-PRDGDAIVRPFEAGMALWKAGFYVRFGGDTLQFGPT 425 (449)
T ss_dssp HTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEEC-CBTTBSSHHHHHHHHHHHHHTEECEEETTEEEECCC
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEe-cCcccccccHHHHHHHHHHCCcEEecCCCEEEEECC
Confidence 7789999999999999999887556666667888999999887 432111000235888899999999998899999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+.++++++++++++|++++.+++
T Consensus 426 ~~~t~~~i~~~l~~l~~~l~~~~ 448 (449)
T 3a8u_X 426 FNSKPQDLDRLFDAVGEVLNKLL 448 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CcCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 20
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=2.8e-53 Score=416.44 Aligned_cols=384 Identities=20% Similarity=0.291 Sum_probs=308.2
Q ss_pred cccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHH
Q psy14484 6 YFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85 (430)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (430)
.|..+.+.|.++.+++|+ ++||.||++||||.+++++++|||+||+|++|+.++++++.+ ..++++...+++++
T Consensus 28 ~~~~~~~~p~~~~~~~G~---~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~la~~ 101 (429)
T 4e77_A 28 AFTGVGGIPLFIERADGA---YLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLS---FGAPTEMEVKMAQL 101 (429)
T ss_dssp GTTTTCSCCCCEEEEEBT---EEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC---CSSCCHHHHHHHHH
T ss_pred cccccCCCCceEEEeecC---EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcc---cCCCCHHHHHHHHH
Confidence 344445689999999888 799999999999999999999999999999999999987532 24678899999999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh--h-----hhc
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE--I-----YTS 158 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~--~-----~~~ 158 (430)
|++.++ +.++++|++||+||++.|+++++.++ ++++||+++++|||++...+...+...... + ...
T Consensus 102 l~~~~~-~~~~v~~~~sGsea~~~al~~a~~~~------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (429)
T 4e77_A 102 VTDLVP-TMDMVRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTD 174 (429)
T ss_dssp HHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCC------------------CCCTTSCGG
T ss_pred HHhhCC-CCCEEEEeCcHHHHHHHHHHHHHHhh------CCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCc
Confidence 999998 78999999999999999999988764 788999999999999875443332111100 0 000
Q ss_pred cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCE
Q psy14484 159 LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~ 238 (430)
........++ +|+++|+++++++++++++|++|| +++++|.+.++++|+++|.++|++||++
T Consensus 175 ~~~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~~g~~~~~~~~l~~l~~l~~~~~~l 236 (429)
T 4e77_A 175 FAKHTLTCTY-----------------NDLASVRQAFEQYPQEVACIIVEP-VAGNMNCIPPLPEFLPGLRALCDEFGAL 236 (429)
T ss_dssp GGTTEEEECT-----------------TCHHHHHHHHHHSTTTEEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCE
T ss_pred cCCceeecCC-----------------CCHHHHHHHHHhcCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0111122222 378999999987767899999999 9999999999999999999999999999
Q ss_pred EEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 239 LIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 239 li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
||+||+|+|| ++|..++.+.+++.||+++|||++++| +|+|++++++++++.+.. .....+++||++++++++++
T Consensus 237 li~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~~~~~l~~---~~~~~~~~t~~~~~~~~aaa 311 (429)
T 4e77_A 237 LIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAP---TGPVYQAGTLSGNPIAMAAG 311 (429)
T ss_dssp EEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTT-SCCEEEEECHHHHTTBTT---TSSBCC--CCCCCHHHHHHH
T ss_pred EEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCC-CCeEEEEECHHHHHHhcc---CCCccccCCCCCCHHHHHHH
Confidence 9999999999 998888888899999999999999988 799999999999888765 22345788999999999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc-c--------chhHHHHHHHHHH
Q psy14484 319 LATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE-Q--------IETFSKKFFVAAL 388 (430)
Q Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~-~--------~~~~a~~~~~~l~ 388 (430)
.++|+.++++++.++++++.+++++.|+++ ..++....+++.|+++++++. .+.. . ....+..+++.|+
T Consensus 312 ~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 390 (429)
T 4e77_A 312 FACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFT-NADTVTCYQDVMNCDVERFKRFFHLML 390 (429)
T ss_dssp HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECC-SSSCCCSHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEc-cCcccccccccccccHHHHHHHHHHHH
Confidence 999998877889999999999999999887 556666678899999999987 5311 0 1112467899999
Q ss_pred HCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 389 KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 389 ~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++||++.+++.. |+++++.+|++++++++++|++++.+
T Consensus 391 ~~Gi~v~~~~~~-~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 391 EEGVYLAPSAFE-AGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp HTTEECCSSTTS-CEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HCCeEEeecCCC-CEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 999999987521 34558899999999999999998864
No 21
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=3.4e-53 Score=417.13 Aligned_cols=391 Identities=24% Similarity=0.397 Sum_probs=324.8
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
..|.++.+++|+ +++|.+|++||||.+++++.+|||+||+|++++.+++.+..++....+.++...+++++|++.++
T Consensus 24 ~~~~~~~~~~G~---~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~ 100 (439)
T 3dxv_A 24 FFPLAISGGRGA---RLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFP 100 (439)
T ss_dssp SSCCEEEEEEBT---EEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTT
T ss_pred CCCceEEEeeeC---EEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC
Confidence 478999999888 79999999999999999999999999999999999998865444456778999999999999997
Q ss_pred CCC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc--chhhhhccCCCeeEeCC
Q psy14484 92 YKL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS--FKEIYTSLLNKTYIITT 168 (430)
Q Consensus 92 ~~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 168 (430)
.+. ++++|++||++|++.|+++++.+. ++++||+++++|||++..+..+++... ++..+.++..+...+++
T Consensus 101 ~~~~~~v~~~~ggsea~~~al~~~~~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (439)
T 3dxv_A 101 GEGTHKIWFGHSGSDANEAAYRAIVKAT------GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPY 174 (439)
T ss_dssp CTTTEEEEEESSHHHHHHHHHHHHHHHH------SCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSS
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHHHh------CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCC
Confidence 667 799999999999999999987654 778999999999999998888877655 66666665544555555
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHH-hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLK-KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~-~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
++.+... .. ..|+++|+++++ .+++++++|+++| +++++|.+.++++++++|.++|++||++||+||+|+|
T Consensus 175 ~~~~~~~---~~----~~d~~~le~~l~~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g 246 (439)
T 3dxv_A 175 RPYRNDP---TG----DAILTLLTEKLAAVPAGSIGAAFIEP-IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVG 246 (439)
T ss_dssp SCBTTBT---TS----HHHHHHHHHHHHTSCTTCEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTC
T ss_pred Ccccccc---cH----HHHHHHHHHHHHhcCCCCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 5432211 11 117899999994 3346899999999 9999999999999999999999999999999999999
Q ss_pred CCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh
Q psy14484 248 CGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327 (430)
Q Consensus 248 ~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~ 327 (430)
|+++|..++.+.+++.||+++|||++++| +|+|++++++++++.+.. ..+.+|+ +++++++++.++|+.+++
T Consensus 247 ~g~~g~~~~~~~~~~~~di~s~sK~~~~G-~riG~~~~~~~~~~~~~~------~~~~~t~-~~~~~~~aa~aal~~~~~ 318 (439)
T 3dxv_A 247 LARSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASA------FAMQTLH-GNPISAAAGLAVLETIDR 318 (439)
T ss_dssp TTTTSSSSGGGGTTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTSCSS------SSCCTTT-TCHHHHHHHHHHHHHHHH
T ss_pred CCcCchhhHHHhcCCCCCEEEEcchhcCC-cceEEEEECHHHHhhhcC------CCcCCCc-ccHHHHHHHHHHHHHHHh
Confidence 99999877888889999999999999988 699999999999887765 3467888 999999999999998877
Q ss_pred cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeecC---CE
Q psy14484 328 DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NT 400 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~~---~~ 400 (430)
+++.++++++.+++++.|+++ ..++.+..+++.|.++++++. .+.. .....+..+++.|+++||++.+++ ++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 397 (439)
T 3dxv_A 319 DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELV-CDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNV 397 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEE-EETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEe-cCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCE
Confidence 889999999999999999887 567777788899999999885 3211 112225678999999999999875 89
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+|++.++++++++++++|++++.++
T Consensus 398 iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 398 LEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998865
No 22
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=1.2e-53 Score=418.91 Aligned_cols=385 Identities=20% Similarity=0.277 Sum_probs=318.1
Q ss_pred cccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH
Q psy14484 4 IVYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLS 83 (430)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (430)
.+.|......|.++.+++|+ ++||.||++||||++++++++|||+||+|++|+.++++++.. .+++++...+++
T Consensus 26 ~~~~~~~~~~p~~~~~~~G~---~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~l~ 99 (429)
T 3k28_A 26 VRAFKSVGMNPLFMERGKGS---KVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTS---FGAPTEIENKLA 99 (429)
T ss_dssp GGGCGGGTCCCCCEEEEEBT---EEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSC---CSSCCHHHHHHH
T ss_pred cccccccCCCCceEEEeecC---EEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcC---cCCCCHHHHHHH
Confidence 34444445789999999888 799999999999999999999999999999999999987542 357788999999
Q ss_pred HHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh--hc---
Q psy14484 84 EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY--TS--- 158 (430)
Q Consensus 84 ~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~--~~--- 158 (430)
+++++.++ ++++++|++||+||++.|+++++.+. ++++||+++++|||++..++..++........ .+
T Consensus 100 ~~la~~~~-~~~~v~~~~~Gsea~~~ai~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 172 (429)
T 3k28_A 100 KLVIERVP-SIEIVRMVNSGTEATMSALRLARGYT------GRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVP 172 (429)
T ss_dssp HHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH------TCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCC
T ss_pred HHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCC
Confidence 99999987 78999999999999999999998764 78899999999999988777665532211000 00
Q ss_pred --cCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 159 --LLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 159 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.......+++ +|+++|+++++++++++++|++|| +++++|.+.|+++++++|.++|++||
T Consensus 173 ~~~~~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~ 234 (429)
T 3k28_A 173 EGVAKNTITVAY-----------------NDLESVKYAFEQFGDDIACVIVEP-VAGNMGVVPPQPGFLEGLREVTEQNG 234 (429)
T ss_dssp HHHHTTEEEEET-----------------TCHHHHHHHHHHHGGGEEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHT
T ss_pred CcccCceeecCC-----------------CCHHHHHHHHHhCCCCEEEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0011222222 378999999987656899999999 99999999999999999999999999
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHH
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACC 316 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 316 (430)
++||+||+|+|| ++|..++.+.+++.||+++|||++++| +|+|++++++++++.+.. .....+++|+++++++++
T Consensus 235 ~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~---~~~~~~~~t~~~~~~a~a 309 (429)
T 3k28_A 235 ALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAP---SGPIYQAGTLSGNPLAMA 309 (429)
T ss_dssp CEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTT---TSSBCCCCTTTTCHHHHH
T ss_pred CEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhcc---CCCccccCCCCCChHHHH
Confidence 999999999999 888877788889999999999999888 799999999999888764 233557889999999999
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHH
Q psy14484 317 AALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAA 387 (430)
Q Consensus 317 aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l 387 (430)
++.++|+.++ +++.++++++.+++++.|+++ ..++.+..+++.|+++++++. .... .....+.++++.|
T Consensus 310 aa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 387 (429)
T 3k28_A 310 AGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFT-DEPVINYDAAKSSNLQFFAAYYREM 387 (429)
T ss_dssp HHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESS-SSCCCSHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEe-cCCcccccccccccHHHHHHHHHHH
Confidence 9999998765 678889999999999999887 566777788999999999876 4221 1112246788999
Q ss_pred HHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 388 LKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 388 ~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++||++.+++ +.+|+ ++.+|++++++++++|++++.++
T Consensus 388 ~~~Gv~v~~~~~~~~r~--~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 388 VEQGVFLPPSQFEGLFL--STVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHTTEECCSSTTSCBCC--CTTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHCCeEEecCCCCCEEE--ECCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999874 55666 77999999999999999998764
No 23
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=9.6e-53 Score=412.41 Aligned_cols=383 Identities=22% Similarity=0.267 Sum_probs=319.4
Q ss_pred cccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHH
Q psy14484 6 YFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85 (430)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (430)
.|....+.|.++.+++|+ ++||.||++||||.++++++++||+||+|++|+.++++++.+ ..++++...+++++
T Consensus 27 ~~~~~~~~p~~~~~~~G~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~la~~ 100 (427)
T 3fq8_A 27 AFKSVGGQPIVFDRVKDA---YAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS---FGAPCALENVLAEM 100 (427)
T ss_dssp GCTTTTSCCCCEEEEEBT---EEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC---CSSCCHHHHHHHHH
T ss_pred cccccCCCCceEEEeeeC---EEEECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC---cCCCCHHHHHHHHH
Confidence 333335689999999988 799999999999999999999999999999999999987543 23578899999999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC---
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK--- 162 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~--- 162 (430)
+++.++ ++++++|++||+||++.|+++++.+. ++++||+++++|||++..+....+.......+ +...+
T Consensus 101 l~~~~~-~~~~v~~~~ggsea~~~al~~a~~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~ 172 (427)
T 3fq8_A 101 VNDAVP-SIEMVRFVNSGTEACMAVLRIMRAYT------GRDKIIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPK 172 (427)
T ss_dssp HHHHST-TCSEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTC-CSCSSSCH
T ss_pred HHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCCHHHHHhcCCcccccCC-CCCCCCCC
Confidence 999998 78999999999999999999988764 77899999999999987776665533221110 11111
Q ss_pred -----eeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy14484 163 -----TYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 237 (430)
Q Consensus 163 -----~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi 237 (430)
...+++ +|+++|+++++++++++++|++|| +++++|.+.++++++++|.++|++||+
T Consensus 173 ~~~~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~ 234 (427)
T 3fq8_A 173 KTTANTLTTPY-----------------NDLEAVKALFAENPGEIAGVILEP-IVGNSGFIVPDAGFLEGLREITLEHDA 234 (427)
T ss_dssp HHHTTEEEEET-----------------TCHHHHHHHHHHSTTTEEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHTTC
T ss_pred cccCceeecCC-----------------CCHHHHHHHHHhCCCCEEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 122222 388999999988767899999999 999999999999999999999999999
Q ss_pred EEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy14484 238 HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317 (430)
Q Consensus 238 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 317 (430)
+||+||+|+|| ++|..+..+.+++.||+++|||++++| +|+|++++++++++.+.. .+...+++|++++++++++
T Consensus 235 ~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~~G~~~~~~~~~~~~~~---~~~~~~~~t~~~~~~~~aa 309 (427)
T 3fq8_A 235 LLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAP---AGPMYQAGTLSGNPLAMTA 309 (427)
T ss_dssp EEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTT---TSSBCCCCTTTTCHHHHHH
T ss_pred EEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhhCC-cceEEEEEcHHHHHhhcc---CCCccccCCCCcCHHHHHH
Confidence 99999999999 888877778889999999999999988 799999999999988765 2345688999999999999
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc--------chhHHHHHHHHHH
Q psy14484 318 ALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ--------IETFSKKFFVAAL 388 (430)
Q Consensus 318 a~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~a~~~~~~l~ 388 (430)
+.++|+.++++++.++++++.+++++.|+++ ...+....+++.|.++++++. ..... ....+..+++.|+
T Consensus 310 ~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 388 (427)
T 3fq8_A 310 GIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFT-EGPVHNYEDAKKSDLQKFSRFHRGML 388 (427)
T ss_dssp HHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESS-SCCCCSHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEe-cCccccccccccccHHHHHHHHHHHH
Confidence 9999998877889999999999999999887 455555567889999999886 43211 1112467899999
Q ss_pred HCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 389 KNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 389 ~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++||++.+++. .|+++++.+|++++++++++|++++.+
T Consensus 389 ~~Gi~v~~~~~-~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 389 EQGIYLAPSQF-EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HTTEECCSSTT-SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCcEEecCCC-CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 99999998763 267789999999999999999999876
No 24
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=4e-53 Score=413.84 Aligned_cols=383 Identities=24% Similarity=0.419 Sum_probs=321.8
Q ss_pred ccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHh
Q psy14484 9 KKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS 88 (430)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 88 (430)
.+.+.|.++.+++|+ ++||.||++||||.++++++++||++|+|++++.+++++..+.. ..+..+...+++++|++
T Consensus 35 ~~~~~~~~~~~~~g~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~l~~~la~ 110 (420)
T 2pb2_A 35 VYAPADFIPVKGKGS---RVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTS-NVFTNEPALRLGRKLID 110 (420)
T ss_dssp ----CCSCEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCC-TTSCCHHHHHHHHHHHH
T ss_pred cccCCCceEEeeecC---EEEECCCCEEEEccccccccccCCCCHHHHHHHHHHHHhccccc-CccCCHHHHHHHHHHHh
Confidence 445578899999888 79999999999999999999999999999999999998765432 24577889999999999
Q ss_pred hcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 89 ~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
.+ +.++++|++||+||++.|+++++.+.+.+|.++++.||+++++||+++......++.+.++..+.++..++..+++
T Consensus 111 ~~--g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~ 188 (420)
T 2pb2_A 111 AT--FAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF 188 (420)
T ss_dssp HS--SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT
T ss_pred hC--CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC
Confidence 98 4689999999999999999999877666666677799999999999988777766655555556666666666655
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|+++++ +++++|++|| +++++|.++++.+++++|.++|++||++||+||+|+||
T Consensus 189 ~-----------------d~~~le~~i~---~~~~~vi~~p-~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~ 247 (420)
T 2pb2_A 189 N-----------------DLHAVKAVMD---DHTCAVVVEP-IQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGM 247 (420)
T ss_dssp T-----------------CHHHHHHHCC---TTEEEEEECS-EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred C-----------------CHHHHHHHhc---cCceEEEEeC-CcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCc
Confidence 3 7899999885 5799999999 99998988899999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|..++++..++.||+++|||++++| +|+|++++++++++.+.. ..++.|+++++++++++.++|+.++++
T Consensus 248 ~~~g~~~~~~~~~~~~diit~sK~l~~G-~~iG~~~~~~~l~~~l~~------~~~~~t~~~~~~~~aa~~a~L~~~~~~ 320 (420)
T 2pb2_A 248 GRTGDLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAFHV------GSHGSTYGGNPLACAVAGAAFDIINTP 320 (420)
T ss_dssp TTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTCC----------CCEECCCHHHHHHHHHHHHHHSSH
T ss_pred ccCCcHHHHHhcCCCCCeEEecccccCC-CceEEEEEhHHHHHhhcC------CCcCcccCcCHHHHHHHHHHHHHHHhc
Confidence 9998877677778899999999999988 799999999998776654 236788999999999999999988767
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCC
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPP 406 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~ 406 (430)
++.++++++++++.+.|+++ ..++.+..+++.|.++++++. ..... . +.++.+.|+++||++.++ ++++||+|+
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~-~~~~~-~--~~~l~~~l~~~Gi~v~~~~~~~iRl~~~ 396 (420)
T 2pb2_A 321 EVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELK-PKYKG-R--ARDFLYAGAEAGVMVLNAGADVMRFAPS 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEEC-GGGTT-C--HHHHHHHHHHTTEECEESSTTEEEECCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEEC-CCchH-H--HHHHHHHHHHCCCEEEeCCCCEEEEECC
Confidence 78899999999999999887 345666667889999999887 42100 1 367999999999999987 489999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+.++++++++++++|++++++++
T Consensus 397 ~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 397 LVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998875
No 25
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=1.6e-52 Score=411.68 Aligned_cols=399 Identities=23% Similarity=0.361 Sum_probs=326.7
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++++++|+ ++||.+|++|+||.++.++.++||++|+|++++.+++.+..+. ...+.++...++++.+++.++.
T Consensus 25 ~~~~~~~~~g~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~~ 100 (433)
T 1zod_A 25 EPMIIERAKGS---FVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHL-FSEMLSRPVVDLATRLANITPP 100 (433)
T ss_dssp CSSCCCEEEBT---EEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCC-CTTCCCHHHHHHHHHHHHHSCT
T ss_pred CCceEEEeecC---EEEeCCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCccc-ccccCCHHHHHHHHHHHHhCCC
Confidence 47888888887 7999999999999999999999999999999999999876432 3467788889999999999987
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
++++|+|++||+||++.|+++++.+. ++++||+++++|||++..++..++.+ ++..+.+...+...++.|..+
T Consensus 101 ~~~~v~~~~gg~ea~~~a~~~~~~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~ 173 (433)
T 1zod_A 101 GLDRALLLSTGAESNEAAIRMAKLVT------GKYEIVGFAQSWHGMTGAAASATYSA-GRKGVGPAAVGSFAIPAPFTY 173 (433)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHHH------TCCEEEEETTCCCCSSHHHHHTCCSS-CCSSSCCCCTTEEEECCCCTT
T ss_pred CcCEEEEeCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCChhHHhhcCCc-cccccCCCCCCceEecCCccc
Confidence 78999999999999999999887543 67899999999999988877766543 333344444566677766544
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhC-CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
+.+++.+.++....|+++|+++++++ ++++++|++|| +++++|.++++++++++|.++|++||++||+||+|+||+++
T Consensus 174 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~ 252 (433)
T 1zod_A 174 RPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEP-ILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRT 252 (433)
T ss_dssp SCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECS-EETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred ccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEcc-ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcC
Confidence 33221111111123789999999753 25789999999 99999988999999999999999999999999999999998
Q ss_pred ccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 252 g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
|..++++..++.||+++|||++++| +|+|++++++++++.+.. ....+++|+++++++++++.++|+.++++++.
T Consensus 253 g~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~ 327 (433)
T 1zod_A 253 GTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHE----LGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLV 327 (433)
T ss_dssp SSSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHH----TTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred chHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhcc----CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence 8777777778899999999999988 799999999999888765 12335588999999999999999988778899
Q ss_pred HHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCcc---chhHHHHHHHHHHHCCcEEeecC-----CEEE
Q psy14484 332 QRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQ---IETFSKKFFVAALKNELLLRPIG-----NTVY 402 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~a~~~~~~l~~~Gv~~~~~~-----~~lR 402 (430)
+++++++++++++|+++ ..++.+..+++.|+++++++. .+... ....+.++++.|+++||++.+++ +++|
T Consensus 328 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lR 406 (433)
T 1zod_A 328 ARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIV-KDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFR 406 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEE-EETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEe-cCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEE
Confidence 99999999999999887 456766678889999999886 42110 01124678999999999998864 7999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|+|++.++++++++++++|++++++++
T Consensus 407 i~~~~~~t~~~i~~~l~~l~~~l~~~~ 433 (433)
T 1zod_A 407 IAPPLTVSEDEIDLGLSLLGQAIERAL 433 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998764
No 26
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.1e-51 Score=405.26 Aligned_cols=398 Identities=35% Similarity=0.639 Sum_probs=323.2
Q ss_pred Ccee-EEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLV-IRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~-~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.+ +.+++|+ ++||.+|++|+||.++.+++++||.+|+|++++.+++++........+.++...++++.+++.++
T Consensus 24 ~~~~~~~~~~g~---~~~d~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~ 100 (429)
T 1s0a_A 24 LPVYPVVSAEGC---ELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTP 100 (429)
T ss_dssp CCCEEEEEEEBT---EEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSC
T ss_pred CCceeEEeeeee---EEEeCCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCC
Confidence 3555 8888887 79999999999999999999999999999999999998754332335667888999999999998
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc-chhhhhccCCCeeEeCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS-FKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (430)
.++++|+|++||+||++.|+++++.++..+|.| +++||+++++||+++..+..+++... ++..+.+...+...++.|.
T Consensus 101 ~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~-~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (429)
T 1s0a_A 101 QPLECVFLADSGSVAVEVAMKMALQYWQAKGEA-RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ 179 (429)
T ss_dssp TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCC-CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCC
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCC-CCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCc
Confidence 788999999999999999999887654334432 67899999999999887776665432 4445555445566666653
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
.... +.+...|+++|+++++++++++++|+++| + +|++|.++|+++++++|.++|++||+++|+||+|+||+
T Consensus 180 ~~~~------~~~~~~d~~~l~~~l~~~~~~~~~vi~~p-~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g 252 (429)
T 1s0a_A 180 SRMD------GEWDERDMVGFARLMAAHRHEIAAVIIEP-IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFG 252 (429)
T ss_dssp SBC-------CCCCGGGGHHHHHHHHHHTTTEEEEEECS-SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccc------ccchHHHHHHHHHHHHhCCCCEEEEEEee-cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCc
Confidence 2100 00011388999999976545789999999 8 99999999999999999999999999999999999999
Q ss_pred CcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC
Q psy14484 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~ 329 (430)
++|..++++..++.||+++|||++++|++|+|++++++++++.+.. ...+.+.+.+|+++|+++++++.++|+.+++++
T Consensus 253 ~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~-~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~ 331 (429)
T 1s0a_A 253 RTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISN-GEAGCFMHGPTFMGNPLACAAANASLAILESGD 331 (429)
T ss_dssp TTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHT-STTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCH
T ss_pred ccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhc-CCCcccccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 9887667777788999999999999875799999999999887765 212333466899999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCC
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYIL 409 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~ 409 (430)
+.+++++++++++++|+++..++.+..+++.|+++++++. ... . +..+.+.|+++||.+.+.++++||+|++.+
T Consensus 332 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~-~~~--~---~~~l~~~l~~~Gi~v~~~~~~iRis~~~~~ 405 (429)
T 1s0a_A 332 WQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETT-HPV--N---MAALQKFFVEQGVWIRPFGKLIYLMPPYII 405 (429)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEES-SCB--C---HHHHHHHHHHTTEECCCBTTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEEC-Ccc--c---HHHHHHHHHHCCCEEeccCCEEEEECCCCC
Confidence 8899999999999999887446666667788999888876 421 1 357889999999999998899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy14484 410 NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~ 428 (430)
+++++++++++|+++++++
T Consensus 406 t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 406 LPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp CHHHHHHHHHHHHHHTSSG
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987543
No 27
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.6e-52 Score=412.76 Aligned_cols=390 Identities=21% Similarity=0.326 Sum_probs=317.1
Q ss_pred EeecCCceeEEEE-CCCCEEEecccccccccCCCCCHHHH-H-HHHH---HHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 18 RSLKNSWKWSLID-VSGKRYLDAISSWWVNLFGHSNSYIN-K-ALKN---QLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 18 ~~~~~~~~~~~~d-~~g~~~lD~~~~~~~~~lG~~~p~v~-~-a~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.+++|+ ++|| .||++||||.+++++++|||+||+|+ + |+.+ ++.++.+.. +.+.++...++++.|++.++
T Consensus 40 ~~~~g~---~~~d~~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~-~~~~~~~~~~la~~la~~~~ 115 (449)
T 2cjg_A 40 TRSGGS---YLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSN-SDVYSVAMARFVETFARVLG 115 (449)
T ss_dssp TTCBBT---EEEBTTTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCT-TTCCCHHHHHHHHHHHHHHC
T ss_pred eeeeeC---EEEECCCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCC-cccCCHHHHHHHHHHHHhcC
Confidence 466665 8999 99999999999999999999999999 9 9999 777654433 35778888999999999985
Q ss_pred -CCCCeEEEcCCchHHHHHHHHHHHHhhhhc----C--CCCCcEEEEEcCCCCCcchhhhccCCC-ccchhhhhccCCCe
Q psy14484 92 -YKLGHCFYGSDGASAVEVALKMSFHYWYNK----G--FLNKKKFICLQNSYHGETLGALAVTNI-QSFKEIYTSLLNKT 163 (430)
Q Consensus 92 -~~~~~v~~~~sgteA~~~al~~~~~~~~~~----g--~~~~~~vl~~~~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~ 163 (430)
.++++|+|++||+||++.|+++++.++..+ | .+++++||+++++|||++..++.+++. +.++..+.++..+.
T Consensus 116 ~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (449)
T 2cjg_A 116 DPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPR 195 (449)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCE
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCc
Confidence 467899999999999999999988665321 1 123789999999999999988887775 44555565555555
Q ss_pred eEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 164 YIITTPD--SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 164 ~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
.++++++ ..... .......++++|+++++++++++++|++|| +++++|.++++++++++|.++|++||++||+
T Consensus 196 ~~~~~~d~~~~~~~----~~~~~~~~~~~le~~i~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 270 (449)
T 2cjg_A 196 IDAPYMRPGLDEPA----MAALEAEALRQARAAFETRPHDIACFVAEP-IQGEGGDRHFRPEFFAAMRELCDEFDALLIF 270 (449)
T ss_dssp ECCCCCCTTCCHHH----HHHHHHHHHHHHHHHHHHSTTTEEEEEECS-EETTTTCEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEcCCCchhhccc----cchhhHHHHHHHHHHHHhcCCceEEEEEeC-cCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 5665543 11100 000112477889999976556899999999 9999999999999999999999999999999
Q ss_pred eccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 242 DEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 242 DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
||+|+|++++|..++++.+++.||+++|||++ |+|++++++++++.+.+ .......+++|+++|+++++++.++
T Consensus 271 DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~-~~~~~~~~~~t~~~n~~~~~aa~aa 344 (449)
T 2cjg_A 271 DEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADN-VFAVPSRLNSTWGGNLTDMVRARRI 344 (449)
T ss_dssp ECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTC-TTTSTTSSCCSSSSCHHHHHHHHHH
T ss_pred eccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhh-cccCCcccccCCCCCHHHHHHHHHH
Confidence 99999999999877777888999999999987 79999999998876321 0011234678999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-
Q psy14484 322 LEIFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG- 398 (430)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~- 398 (430)
|+.++++++.+++++++++++++|+++ ..++. +..+++.|+|+.+++. .. ..+..+++.|+++||++.+++
T Consensus 345 l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~~~l~~~Gv~v~~~g~ 418 (449)
T 2cjg_A 345 LEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLP-TT-----ADRDELIRQLWQRAVIVLPAGA 418 (449)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECS-SH-----HHHHHHHHHHHHTTEECEEETT
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEEC-Ch-----HHHHHHHHHHHHCCeEEecCCC
Confidence 998877789999999999999999987 45675 6678899999998776 31 114679999999999999975
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++||+|++.+|+++|++++++|++++.++
T Consensus 419 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 419 DTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999998765
No 28
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=2e-52 Score=414.00 Aligned_cols=391 Identities=21% Similarity=0.313 Sum_probs=304.3
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccC--CCCCHHHHHHHHHHHh
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLS--NLTHKPVIKLSEKLSS 88 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~--~~~~~~~~~l~~~l~~ 88 (430)
.+.++.+++|. |+||.||++||||++|+++.+|||+||+|++|+.+++.... +.... ....++.+++++.|.+
T Consensus 45 ~~~~~~~~~G~---~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~ 121 (472)
T 1ohv_A 45 FFCNYEESRGN---YLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLS 121 (472)
T ss_dssp CCBCGGGCBBT---EEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGG
T ss_pred CCceEEEEEcC---EEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHH
Confidence 34556666666 89999999999999999999999999999999999875432 21111 1134566777777888
Q ss_pred hcCCCCCeEEEcCCchHHHHHHHHHHHHhhhh--cC----------------CCC--CcEEEEEcCCCCCcchhhhccCC
Q psy14484 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYN--KG----------------FLN--KKKFICLQNSYHGETLGALAVTN 148 (430)
Q Consensus 89 ~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~--~g----------------~~~--~~~vl~~~~~yhg~~~~~~~~~~ 148 (430)
.++.++++|+|++||+||++.|+++++.+++. +| .|+ +++||+++++|||++.+++.+++
T Consensus 122 ~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g 201 (472)
T 1ohv_A 122 VAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTH 201 (472)
T ss_dssp GCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred hCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCC
Confidence 77667889999999999999999999876431 22 134 58999999999999999988887
Q ss_pred CccchhhhhccCCCeeEeCCCCCCCCCCCCC--h-hHHHHHHHHHHHHHHHhCCC---CeEEEEEccccccCCCcccCCh
Q psy14484 149 IQSFKEIYTSLLNKTYIITTPDSRNINKGNS--A-NEIARCAIFDLEILLKKNHN---KIAAIIIEPLVQCAGGMIMYDS 222 (430)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~d~~~le~~l~~~~~---~~~~vi~ep~v~~~~G~~~~~~ 222 (430)
.+.++....+. .++.++++|. ++.+.... . +.....|+++|+++++++.+ ++++|++|| +++++|.++|++
T Consensus 202 ~~~~~~~~~~~-~~~~~~~~p~-~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~-v~~~~G~~~~~~ 278 (472)
T 1ohv_A 202 SKAIHKIDIPS-FDWPIAPFPR-LKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEP-IQSEGGDNHASD 278 (472)
T ss_dssp SCHHHHTTSCC-CCCCEECCCC-CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECS-SBCTTTCBCCCH
T ss_pred CccccccCCCC-CCCcccCCCc-ccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcC-CcCCCCCCCCCH
Confidence 65443322222 1233445542 11110000 0 11224489999999985422 799999999 999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCC--Cceeeeecc-cCCCccccEEEEEcHHHHHhhhccCCc
Q psy14484 223 IYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLSKG-ITGGYLPLSLVMTTDKIYNSIYYKNNI 299 (430)
Q Consensus 223 ~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~--~d~~~~sK~-l~gG~~~ig~~~~~~~~~~~~~~~~~~ 299 (430)
+|+++|+++|++||++||+||+|+|||++|.+++++.+++. ||+++|||+ ++||+ ++ ++++. .+
T Consensus 279 ~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~-----~~-~~~~~-~~------ 345 (472)
T 1ohv_A 279 DFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGF-----FH-KEEFR-PN------ 345 (472)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEE-----EE-CGGGS-CS------
T ss_pred HHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCc-----cC-chhhc-cc------
Confidence 99999999999999999999999999999987788888886 999999999 77653 33 55542 11
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-hcCCC-eeeEeecceEEEEEEeecCCccch
Q psy14484 300 NIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPK-IINFRQKGMIWAFDVIIEDPEQIE 377 (430)
Q Consensus 300 ~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 377 (430)
....+.+|+++++++++++.++|+.++++++.+++++++++++++|+++ .+++. +..+++.|+|+.+++. +.
T Consensus 346 ~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~-~~----- 419 (472)
T 1ohv_A 346 APYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTP-DE----- 419 (472)
T ss_dssp SSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECS-SH-----
T ss_pred ccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeC-Ch-----
Confidence 2245788999999999999999998877889999999999999999887 45663 6678889999998765 31
Q ss_pred hHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 378 TFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 378 ~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..+..+++.|+++||++.+++ +++||+|++.+|+++|++++++|++++.++
T Consensus 420 ~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 420 SIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 124679999999999999875 799999999999999999999999998764
No 29
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.7e-50 Score=395.27 Aligned_cols=383 Identities=24% Similarity=0.429 Sum_probs=311.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCC-CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHS-NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.|.++++++|+ ++||.+|++|+||.++.+++++||+ +|+|++|+.+++.+..+.....++++...++++.+++.++
T Consensus 24 ~~~~~~~~~g~---~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~ 100 (419)
T 2eo5_A 24 FPLVIDHGEGV---WIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSP 100 (419)
T ss_dssp CCCCEEEEEBT---EEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSS
T ss_pred CCceEEeeecC---EEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCC
Confidence 68889999887 7999999999999999999999999 9999999999997764433345778888999999999998
Q ss_pred CC-CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCC
Q psy14484 92 YK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 ~~-~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 169 (430)
.+ +++|+|++||+||++.|+++++.+ .+++||+++++|||++..+..+++.. .++..+.+...++..++++
T Consensus 101 ~~~~~~v~~~~gg~ea~~~ai~~~~~~-------~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 173 (419)
T 2eo5_A 101 GNFQKKVFFSNSGTEAIEASIKVVKNT-------GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP 173 (419)
T ss_dssp CSSCEEEEEESSHHHHHHHHHHHHHTT-------SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC
T ss_pred CCcCCEEEEeCchHHHHHHHHHHHHHh-------hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC
Confidence 66 689999999999999999988753 36789999999999988877776654 4444555555566777777
Q ss_pred CCCCCCCCCC-----hhHHHHHHHHHHH-HHHHhCC--CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 170 DSRNINKGNS-----ANEIARCAIFDLE-ILLKKNH--NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 170 ~~~~~~~~~~-----~~~~~~~d~~~le-~~l~~~~--~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+.++.+++.+ .++.. .|+++|+ ++++++. +++++|++|| +++++|.++++++++++|.++|++||+++|+
T Consensus 174 ~~~~~~~g~~~~~~~~~~~~-~~~~~l~~~~i~~~~~~~~~~~vi~~p-~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~ 251 (419)
T 2eo5_A 174 NPYRNPWHINGYENPSELVN-RVIEFIEDYIFVNLVPPEEVAGIFFEP-IQGEGGYVIPPKNFFAELQKLAKKYGILLVD 251 (419)
T ss_dssp CSSSCTTCCCTTTCHHHHHH-HHHHHHHHTHHHHTCCGGGEEEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred ccccccccccccccchhhHH-HHHHHHHHHHHhhccCCCCEEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 6544332221 01111 3788999 8887531 4789999999 9999998899999999999999999999999
Q ss_pred eccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 242 DEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 242 DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
||+|++|+++|..++++..++.||+++|||++++|++|+|+++++++++ .+ . ..+.+|+++++++++++.++
T Consensus 252 DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~------~~~~~t~~~n~~~~~aa~aa 323 (419)
T 2eo5_A 252 DEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-P------GMHSNTFGGNALACAIGSKV 323 (419)
T ss_dssp ECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC-------------CCCCCHHHHHHHHHH
T ss_pred eccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-C------cccCCCCCCCHHHHHHHHHH
Confidence 9999999998876677777889999999999998757999999999877 55 3 13668999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CE
Q psy14484 322 LEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NT 400 (430)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~ 400 (430)
|+.+++ +.++++++++++.+.|+++ +..+++.|+++++++. .+ ...+. +++.|+++||++.+++ ++
T Consensus 324 l~~~~~--~~~~~~~~~~~l~~~L~~~-----~~~~~~~g~~~~i~~~-~~----~~~~~-~~~~l~~~Gv~v~~~~~~~ 390 (419)
T 2eo5_A 324 IDIVKD--LLPHVNEIGKIFAEELQGL-----ADDVRGIGLAWGLEYN-EK----KVRDR-IIGESFKRGLLLLPAGRSA 390 (419)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHTTS-----SSEEEEETTEEEEECS-CH----HHHHH-HHHHHHHTTEECEEETTTE
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHh-----hhheEeeeEEEEEEEe-cC----ccHHH-HHHHHHHCCCEEecCCCCE
Confidence 987654 8888999999999988765 3456788999988774 21 11245 8889999999999985 89
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+|++.++++++++++++|++++.++
T Consensus 391 lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 391 IRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998764
No 30
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=6.7e-56 Score=433.58 Aligned_cols=370 Identities=20% Similarity=0.251 Sum_probs=308.3
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|+++.+++|+ |+||.|||+||||++++++.+|||+||+|++|+.+++.++. .+.++++...+++++|++.+|
T Consensus 82 ~p~~~~~~~G~---~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~---~~~~~~~~~~~Lae~L~~~~p- 154 (465)
T 2yky_A 82 FPLVIAQGTGS---RFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGL---NLSTQTENEALFAEAVCDRFP- 154 (465)
Confidence 48899999887 79999999999999999999999999999999999988742 235678888999999999997
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR 172 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (430)
+.++++|++||+||++.|+++++.++ ++++||+++++|||++...+ ++ +. .... .. ..+.+|
T Consensus 155 ~~~~v~~~nSGseA~~~Aik~ar~~t------gr~~ii~~~~~yHG~~~~~~--sg-~~-~~g~---~~--~~~~~~--- 216 (465)
T 2yky_A 155 SIDLVRFTNSGTEANLMALATATAIT------GRKTVLAFDGGYHGGLLNFA--SG-HA-PTNA---PY--HVVLGV--- 216 (465)
Confidence 77899999999999999999998764 78999999999999987766 22 10 0000 00 112222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 173 NINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
++|+++|+++++++++++++|++|| +++++|.++|+++++++|+++|++||++||+||+|+ + ++|
T Consensus 217 ------------~~d~~~l~~~l~~~~~~~aavi~ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g 281 (465)
T 2yky_A 217 ------------YNDVEGTADLLKRHGHDCAAILVEP-MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLS 281 (465)
Confidence 2489999999976556899999999 999999999999999999999999999999999999 6 888
Q ss_pred cccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHH
Q psy14484 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ 332 (430)
Q Consensus 253 ~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~ 332 (430)
..++++.+++.||++||||++++| +|+|++++++++++.+.. ...+++.+.+|+++|+++++++.++|+.++++++.+
T Consensus 282 ~~~a~~~~gv~pDi~t~sK~lg~G-~piG~v~~~~~i~~~l~~-~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~ 359 (465)
T 2yky_A 282 GGGAQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDP-ARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAAS 359 (465)
Confidence 888888899999999999999998 799999999999988764 112334578999999999999999999988888999
Q ss_pred HHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCCcEEeecCCEEEE
Q psy14484 333 RISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNELLLRPIGNTVYL 403 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~ 403 (430)
++++++++++++|+++ .+++.+..+++.|.|+++++. ++.. .....+..+++.|+++||++.|++...
T Consensus 360 ~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~-~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~-- 436 (465)
T 2yky_A 360 DLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFS-RAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA-- 436 (465)
Confidence 9999999999999887 456655678899999999887 4110 011124678999999999999876322
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++.+|+++|++++++|+++++++
T Consensus 437 -~s~~~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 437 -LSLEIADAGRDAFAEALADFIGEQ 460 (465)
Confidence 788999999999999999998754
No 31
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=8.8e-50 Score=392.14 Aligned_cols=380 Identities=17% Similarity=0.244 Sum_probs=306.5
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|.++.+++|+ ++||.||++||||.++++++++||+||+|++++.+++.+.. ...+..+...+++++|++.++
T Consensus 37 ~~p~~~~~~~G~---~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~ 110 (434)
T 2epj_A 37 PYPFYVKRGEGA---YLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGW---LYGAPGEAEVLLAEKILGYVK 110 (434)
T ss_dssp SSCCCEEEEEBT---EEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS---CCSSCCHHHHHHHHHHHHHHC
T ss_pred CCCeeEEeeecC---EEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCC---CCCCCCHHHHHHHHHHHHhCC
Confidence 348999999888 79999999999999999999999999999999999998742 125678888999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc--hhhhhc-c----CCCee
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF--KEIYTS-L----LNKTY 164 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~--~~~~~~-~----~~~~~ 164 (430)
+.++++|++||+||++.|+++++.++ ++++||+++++|||++...+...+.... ..+... . .....
T Consensus 111 -~~~~v~~~~sgseA~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~ 183 (434)
T 2epj_A 111 -RGGMIRFVNSGTEATMTAIRLARGYT------GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTL 183 (434)
T ss_dssp -TTCEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEE
T ss_pred -CCCEEEEeCCHHHHHHHHHHHHHHhh------CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceE
Confidence 78899999999999999999987654 6788999999999988766554332110 000000 0 01122
Q ss_pred EeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 165 IITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
.+++ +|+++|+++++++++++++|++|| +++++|.++++++++++|.++|++||++||+||+
T Consensus 184 ~~~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv 245 (434)
T 2epj_A 184 VTPY-----------------NDVEALERVFAEYGDRIAGVIVEP-VIANAGVIPPRREFLAALQRLSRESGALLILDEV 245 (434)
T ss_dssp EEET-----------------TCHHHHHHHHHHHGGGEEEEEECS-SBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEET
T ss_pred ecCC-----------------CCHHHHHHHHHhCCCCEEEEEEeC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 3332 278999999976445799999999 9999998899999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|+|| ++|..++++.+++.||+++|||++++| +|+|++++++++++.+.. .....+++||++++++++++.++|+.
T Consensus 246 ~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~---~~~~~~~~t~~~~~~~~aa~~a~l~~ 320 (434)
T 2epj_A 246 VTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTP---QGKVFNAGTFNAHPITMAAGLATLKA 320 (434)
T ss_dssp TTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTT---TSSBCCCCTTTTCHHHHHHHHHHHHH
T ss_pred hhce-eCCcchhhHHhCCCCCeeeecchhcCC-cceeeeeecHHHHHhhcc---CCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 9999 777767777788899999999999998 799999999999887754 12234678999999999999999998
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHHHCCcEEe
Q psy14484 325 FNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAALKNELLLR 395 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~~~Gv~~~ 395 (430)
++++++.+++++++++++++|+++ ..++....+++.|.++++++. .... .......++.+.|+++||++.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~ 399 (434)
T 2epj_A 321 LEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIG-VEEVSNAAQARKADKKFYVKLHEEMLRRGVFIA 399 (434)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEET-CSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECC
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEe-CCCcccchhccccCHHHHHHHHHHHHHCCeEEe
Confidence 877889999999999999999887 334444457888999999886 4210 001124679999999999999
Q ss_pred ecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 396 PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 396 ~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++. .|+++++.++++++++++++|++++++++
T Consensus 400 ~~~~-~~~~~~~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 400 PSNL-EAVFTGLPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp SSTT-SCEECCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC-CcEEEeccCCHHHHHHHHHHHHHHHHHHh
Confidence 8753 24566889999999999999999998764
No 32
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-49 Score=389.83 Aligned_cols=382 Identities=21% Similarity=0.292 Sum_probs=305.4
Q ss_pred ccccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHH
Q psy14484 5 VYFKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSE 84 (430)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (430)
+.|..+...|.++.+++|+ ++||.||++||||.+++|++++||+||+|++|+.+++++... ..+.++...++++
T Consensus 26 ~~~~~~~~~p~~~~~~~g~---~~~d~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~l~~ 99 (424)
T 2e7u_A 26 RAFKAVGGTPPFLVRGEGA---YVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLT---FGAPSPLEVALAK 99 (424)
T ss_dssp GGCTTTCSCCCCEEEEEBT---EEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSC---CSSCCHHHHHHHH
T ss_pred eeccccCCCCeeEEeeecC---EEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCC---CCCCCHHHHHHHH
Confidence 4443344568999999887 799999999999999999999999999999999999987421 2467888999999
Q ss_pred HHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc--cchhhhhc-c--
Q psy14484 85 KLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ--SFKEIYTS-L-- 159 (430)
Q Consensus 85 ~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~--~~~~~~~~-~-- 159 (430)
.+++.++ ++++++|++||+||++.|+++++.++ ++++||+++++|||++..++...+.. .+..+... .
T Consensus 100 ~l~~~~~-~~~~v~~~~~g~ea~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~ 172 (424)
T 2e7u_A 100 KVKRAYP-FVDLVRFVNSGTEATMSALRLARGYT------GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPE 172 (424)
T ss_dssp HHHHHCT-TCCEEEEESSHHHHHHHHHHHHHHHH------CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCH
T ss_pred HHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCC
Confidence 9999987 78999999999999999999977654 67889999999999877665443321 11000000 0
Q ss_pred --CCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCC
Q psy14484 160 --LNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNI 237 (430)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi 237 (430)
......+++ +|+++|+++++++++++++|++|| +++++|.++++++++++|.++ ++||+
T Consensus 173 ~~~~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l-~~~g~ 233 (424)
T 2e7u_A 173 EYAKLTLVLEY-----------------NDPEGLREVLKRRGEEIAAIIFEP-VVGNAGVLVPTEDFLKALHEA-KAYGV 233 (424)
T ss_dssp HHHTTEEEECT-----------------TCHHHHHHHHHHHGGGEEEEEECS-SBCTTSCBCCCHHHHHHHHHG-GGGTC
T ss_pred ccCCceEeCCC-----------------CCHHHHHHHHHhCCCCEEEEEEeC-CCCCCCCcCCCHHHHHHHHHH-HHcCC
Confidence 012223332 278999999975435799999999 999999899999999999999 99999
Q ss_pred EEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy14484 238 HLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317 (430)
Q Consensus 238 ~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 317 (430)
+||+||+|+|| ++|..++++.+++.||+++|||++++| +|+|++++++++++.+.. .....+.+||++|++++++
T Consensus 234 ~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~---~~~~~~~~t~~~~~~~~aa 308 (424)
T 2e7u_A 234 LLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAP---LGPVYQAGTLSGNPLAMAA 308 (424)
T ss_dssp EEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTT---TSSBCCCCTTCSCHHHHHH
T ss_pred EEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhcc---cCCcccCCCCCCCHHHHHH
Confidence 99999999999 777767777788999999999999988 799999999999887764 1223467899999999999
Q ss_pred HHHHHHHHhh-cCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHH
Q psy14484 318 ALATLEIFNK-DNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAA 387 (430)
Q Consensus 318 a~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l 387 (430)
+.++|+.+++ +++.+++++++++++++|+++ ..++....+++.|.++++++. .... .....+.++++.|
T Consensus 309 a~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 387 (424)
T 2e7u_A 309 GLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFT-EGPVVTFQDARRTDTELFKRFFHGL 387 (424)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESS-SSCCCSHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEe-CCCCcchhhhcccCHHHHHHHHHHH
Confidence 9999998877 788999999999999999887 445554457888999999886 4210 0111246789999
Q ss_pred HHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 388 LKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 388 ~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+++||++.+++. .|+++++.++++++++++++|++++
T Consensus 388 ~~~Gv~v~~~~~-~~~~~~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 388 LDRGIYWPPSNF-EAAFLSVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp HTTTEECCSSSS-SCEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHCCeEEeccCC-CceEeeccCCHHHHHHHHHHHHHhC
Confidence 999999998752 2456688999999999999998763
No 33
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=3.7e-49 Score=384.33 Aligned_cols=385 Identities=25% Similarity=0.392 Sum_probs=329.7
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
++.+.+.|.++.+++|+ ++||.+|++|+||.++++++++||++|++.+++.+++.+..+.. ..+..+...++++++
T Consensus 15 ~~~~~~~~~~~~~~~g~---~~~~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l 90 (406)
T 4adb_A 15 IPVYAPAPFIPVRGEGS---RLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTG-NGYTNEPVLRLAKKL 90 (406)
T ss_dssp CSSCCCCSSCEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC-TTSCCHHHHHHHHHH
T ss_pred hhhcCCCCceEEeeccC---EEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccccc-CCcCCHHHHHHHHHH
Confidence 34456788999999888 79999999999999999999999999999999999998754332 346678889999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.+ +.+++++++||++|++.|+++++.+.+.+|.++++.|++.+++||++.......++.+.++..+.+...+...+
T Consensus 91 a~~~--~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
T 4adb_A 91 IDAT--FADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA 168 (406)
T ss_dssp HHHS--SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE
T ss_pred HhhC--CCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe
Confidence 9998 55699999999999999999988765556656778999999999999888888887777777777766666666
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
+.+ |+++|+++++ +++++|+++| +++++|...++.+++++|.++|++||+++|+||+|+
T Consensus 169 ~~~-----------------d~~~l~~~l~---~~~~~v~~~p-~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 227 (406)
T 4adb_A 169 AYN-----------------DINSASALID---DSTCAVIVEP-IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT 227 (406)
T ss_dssp CTT-----------------CHHHHHTTCS---TTEEEEEECS-EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCC-----------------cHHHHHHHhc---CCeEEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 654 7899988885 6799999999 999999888899999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
||+++|..++.+..++.||+++|||++++| +|+|++++++++++.+.. ..+..+++.++++++++.++|+.++
T Consensus 228 ~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~ 300 (406)
T 4adb_A 228 GVGRTGELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTV------GTHGTTYGGNPLASAVAGKVLELIN 300 (406)
T ss_dssp TTTTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCT------TSSCCSSTTCHHHHHHHHHHHHHHS
T ss_pred CCCccchhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhcc------CCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 999988877777788899999999999988 799999999999887765 3467889999999999999999876
Q ss_pred hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEe
Q psy14484 327 KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLM 404 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~ 404 (430)
.+++.++++++.+++.+.|+++ ..++.+...++.|.++++.+. .+.... +.++++.|.++||.+.+++ +++|++
T Consensus 301 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~---~~~~~~~l~~~gi~v~~~~~~~iRi~ 376 (406)
T 4adb_A 301 TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLN-ADYAGQ---AKQISQEAAKAGVMVLIAGGNVVRFA 376 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEEC-TTTTTC---HHHHHHHHHHTTEECEESSTTEEEEC
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEe-CCcHHH---HHHHHHHHHHCCcEEeecCCCeEEEE
Confidence 6778899999999999999887 444556677888999999887 532111 4679999999999999875 899999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++.++++++++++++|++++.++.
T Consensus 377 ~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 377 PALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 34
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=4.3e-49 Score=382.14 Aligned_cols=377 Identities=26% Similarity=0.430 Sum_probs=321.7
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
+..+.+.|.++.+++|+ +++|.+|++|+||.+++++.++||++|+|.+++.+++....+... .+..+...++++++
T Consensus 12 ~~~~~~~~~~~~~~~g~---~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l 87 (392)
T 3ruy_A 12 ANNYHPLPIVISKAEGV---WVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSR-AFHSDQLGPWYEKV 87 (392)
T ss_dssp CTTCCCCSCEECEEEBT---EEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT-TSEETTHHHHHHHH
T ss_pred hccCCCCCceEEeeeeC---EEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHH
Confidence 34456788999999888 799999999999999999999999999999999999987654332 35677888999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhh-hhcCC-CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCee
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYW-YNKGF-LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTY 164 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~-~~~g~-~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (430)
++.+ +.++++|++||++|++.|+++++... ..+|. +++++|++.+++|||.+..+..++..+.++..+.+...+..
T Consensus 88 a~~~--g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (392)
T 3ruy_A 88 AKLT--NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGII 165 (392)
T ss_dssp HHHH--TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEE
T ss_pred HHhc--CCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCe
Confidence 9998 47899999999999999999887641 12222 24679999999999999888888777677766666665555
Q ss_pred EeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 165 IITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
.++++ |+++|+++++ +++++|++++ ++|++|.+.++++++++|.++|++||+++|+||+
T Consensus 166 ~~~~~-----------------d~~~l~~~l~---~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~ 224 (392)
T 3ruy_A 166 VIPYG-----------------DLEALKAAIT---PNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVADEI 224 (392)
T ss_dssp EECTT-----------------CHHHHHHHCC---TTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECT
T ss_pred eeCcc-----------------cHHHHHHHhc---cCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 55543 7899999885 6799999999 9999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 245 AVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 245 ~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
|++|+++|..+..+..++.||+++|||+++||++|+|++++++++++.+.. ..++.+++.++++++++.++|+.
T Consensus 225 ~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~ 298 (392)
T 3ruy_A 225 QTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP------GSHGSTFGGNPLACAVSIAALEV 298 (392)
T ss_dssp TTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT------TSSCCSSTTCHHHHHHHHHHHHH
T ss_pred hhCCCccccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc------CCcCCCCCCCHHHHHHHHHHHHH
Confidence 999999988777788888999999999999986799999999998877764 34677889999999999999998
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEE
Q psy14484 325 FNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYL 403 (430)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~ 403 (430)
++.+++.++++++.+++.+.|+++ ..+.+...++.|.++.+.+. . . +.++.+.|.++||.+.+++ +++|+
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~g~~~~~~~~-~----~---~~~l~~~l~~~gi~v~~~~~~~iRi 369 (392)
T 3ruy_A 299 LEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIELN-E----P---ARPYCEQLKAAGLLCKETHENVIRI 369 (392)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHTTC-CCTTEEEEEEETTEEEEEES-S----C---SHHHHHHHHTTTEECCCBTTTEEEE
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHh-cCCCceEEEeeeeEEEEEEc-c----h---HHHHHHHHHHCCcEEecCCCCEEEE
Confidence 777888999999999999999877 33556677888999999876 4 1 2578999999999999875 89999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l 425 (430)
++++.++++++++++++|++++
T Consensus 370 ~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 370 APPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999998876
No 35
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=3.1e-48 Score=383.14 Aligned_cols=377 Identities=18% Similarity=0.270 Sum_probs=287.4
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
+.|+++.+++|+ ++||.+|++||||.+++|++++||+||+|++++.+++..... ..+..+...++++++++.++
T Consensus 38 ~~p~~~~~~~G~---~~~d~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~---~~~~~~~~~~la~~l~~~~~ 111 (453)
T 2cy8_A 38 PHGLFISDAQGV---HKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQ---YAASHPLEVRWAERIVAAFP 111 (453)
T ss_dssp SCCCCEEEEEBT---EEEETTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCS---SCSSCHHHHHHHHHHHHHCT
T ss_pred CCCceEEEeecC---EEEECCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCC---CCCCCHHHHHHHHHHHhhCC
Confidence 458899999887 799999999999999999999999999999999999876432 25678899999999999987
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhh-cc----CCCeeEe
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT-SL----LNKTYII 166 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~ 166 (430)
+.++|+|++||+||++.|+++++.++ ++++||+++++|||++.......+. .+..+.. .. ......+
T Consensus 112 -~~~~v~~~~gg~eA~~~al~~ar~~~------~~~~vi~~~~~yhg~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~ 183 (453)
T 2cy8_A 112 -SIRKLRFTGSGTETTLLALRVARAFT------GRRMILRFEGHYHGWHDFSASGYNS-HFDGQPAPGVLPETTANTLLI 183 (453)
T ss_dssp -TCSEEEEESCHHHHHHHHHHHHHHHH------CCCEEEEECC-----------------------------CGGGEEEE
T ss_pred -CCCEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEEcCCcCCCchhhHhhcCC-ccCCCcCCCCCccccCceeec
Confidence 78999999999999999999977554 6678999999999987765543321 0000000 00 0112223
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
++ +|+++|+++++++++++++|++|| +++++|.++++++++++|.++|++||++||+||+|+
T Consensus 184 ~~-----------------~d~~~le~~l~~~~~~~~~vi~ep-~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 245 (453)
T 2cy8_A 184 RP-----------------DDIEGMREVFANHGSDIAAFIAEP-VGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS 245 (453)
T ss_dssp CT-----------------TCHHHHHHHHHHHGGGEEEEEECS-SEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CC-----------------CCHHHHHHHHHhcCCCEEEEEECC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 22 278999999976445799999999 988899889999999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-H
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-F 325 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-~ 325 (430)
|| +.|..++++.+++.||++++||++++| +|+|++++++++++.+.. .......+.+|+++++++++++.++|+. +
T Consensus 246 g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~-~~~~~~~~~~t~~~n~~~~aa~~aal~~~~ 322 (453)
T 2cy8_A 246 GF-RVGNHGMQALLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSR-GSDRKVLHQGTFTGNPITAAAAIAAIDTIL 322 (453)
T ss_dssp TT-TTCTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTSSS-CC---------CCCCHHHHHHHHHHHHHHH
T ss_pred cc-ccCchhhhHHhCCCCcEEEEChhhhCC-cceEEEechHHHHHHhcc-ccCCCceeCCCCCCCHHHHHHHHHHHHHHh
Confidence 99 887766777788899999999999988 799999999999887754 1112234677999999999999999997 7
Q ss_pred hhcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeec-----CCc---------cchhHHHHHHHHHHHC
Q psy14484 326 NKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIE-----DPE---------QIETFSKKFFVAALKN 390 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~-----~~~---------~~~~~a~~~~~~l~~~ 390 (430)
.+++.+++++++++++++|+++ ..++....+++.|.++++++. . +.. .....+.++++.|+++
T Consensus 323 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 400 (453)
T 2cy8_A 323 -EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPG-LPPNTTDTGSITRAEVARPDVKMIAAMRMALILE 400 (453)
T ss_dssp -HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEET-SCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEe-ccccccccccccccccccccHHHHHHHHHHHHHC
Confidence 7789999999999999999887 445554557889999999887 4 100 0111246789999999
Q ss_pred CcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 391 ELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 391 Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
||++.+.+ . +++++.++++++++++++|++++.++
T Consensus 401 Gv~v~~~~-~--~~l~~~~t~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 401 GVDIGGRG-S--VFLSAQHEREHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp TEECBTTT-E--EECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCC-C--EEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 99996554 3 44578999999999999999998765
No 36
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1.3e-46 Score=368.69 Aligned_cols=391 Identities=28% Similarity=0.441 Sum_probs=311.4
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 92 (430)
.|.++.+++|+ ++||.+|++|+||.++.++.++||.+|++.+++.+++.........+++.+...++++.|++.++.
T Consensus 23 ~~~~~~~~~g~---~~~d~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~ 99 (426)
T 1sff_A 23 HPIFADRAENC---RVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG 99 (426)
T ss_dssp EEEEEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC
T ss_pred CCceEEecccC---EEEeCCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc
Confidence 47888898887 799999999999999999889999999999999999876543222356678889999999999952
Q ss_pred CC-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCc-cchhhhhccCCCeeEeCCCC
Q psy14484 93 KL-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ-SFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 93 ~~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (430)
.. ++|++++||++|++.++++++... +++.|++++++||++........+.+ .++..+.+...++..+++++
T Consensus 100 ~~~~~v~~~~g~~~a~~~~~~~a~~~~------~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~ 173 (426)
T 1sff_A 100 DFAKKTLLVTTGSEAVENAVKIARAAT------KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC 173 (426)
T ss_dssp SSCEEEEEESSHHHHHHHHHHHHHHHH------TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCB
T ss_pred ccccEEEEeCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCc
Confidence 24 799999999999999999655432 34589999999999876555544432 23334444334455666653
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC--CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN--HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+++.. ....|+++|++++++. ++++++|+++| +++++|...++++++++|.++|++||++||+||+|+||
T Consensus 174 ~~~~~-------~~~~d~~~l~~~l~~~~~~~~~~~v~~~p-~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 245 (426)
T 1sff_A 174 PLHGI-------SEDDAIASIHRIFKNDAAPEDIAAIVIEP-VQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGA 245 (426)
T ss_dssp GGGTB-------CHHHHHHHHHHHHHHTCCGGGEEEEEECS-BCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ccccc-------chHHHHHHHHHHHHhccCCCceEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhcc
Confidence 22110 0012789999999742 24789999999 77779989999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
+++|..++++..++.||+++|||++++| +|+|++++++++++.+.. ..+..|++.++++++++.++|+.++++
T Consensus 246 ~~~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~aal~~~~~~ 318 (426)
T 1sff_A 246 GRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP------GGLGGTYAGNPIACVAALEVLKVFEQE 318 (426)
T ss_dssp TTTSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT------TSBCCSSSSCHHHHHHHHHHHHHHHHT
T ss_pred CcccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhcc------CCcCcCCCCCHHHHHHHHHHHHHHHhc
Confidence 9888766677778889999999999987 899999999998877653 235678889999999999999988777
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCc---cchhHHHHHHHHHHHCCcEEeecC---CEE
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE---QIETFSKKFFVAALKNELLLRPIG---NTV 401 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~a~~~~~~l~~~Gv~~~~~~---~~l 401 (430)
++.++++++.++++++|+++ ..++.+..+++.|.++++++. .... .....+.++++.|.++||.+.++. +++
T Consensus 319 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~i 397 (426)
T 1sff_A 319 NLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF-EDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVL 397 (426)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEB-GGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEe-cCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEE
Confidence 88999999999999999887 346665566778999999885 3110 011124678999999999999874 789
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
||++++.++++++++++++|++++.++
T Consensus 398 Ri~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 398 RILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=5.1e-46 Score=361.13 Aligned_cols=379 Identities=27% Similarity=0.456 Sum_probs=308.6
Q ss_pred ccccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (430)
...+...|.++.+++|+ ++||.+|++|+||.+++|++++||.+|++.+++.+++....... ..+..+...++++.+
T Consensus 16 ~~~~~~~~~~~~~~~g~---~~~d~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l 91 (397)
T 2ord_A 16 MNTYSRFPATFVYGKGS---WIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCS-NLFWNRPQMELAELL 91 (397)
T ss_dssp CSCCCCCSCEEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCC-TTSEEHHHHHHHHHH
T ss_pred hhcccCCCceEEeeecC---EEEECCCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCc-cccCCHHHHHHHHHH
Confidence 34456688999999887 79999999999999999999999999999999999998754322 235668889999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.+ +.+++++++||++|++.++++++.+... +.++++.||+++++||+.........+...++..+.+...++..+
T Consensus 92 a~~~--g~~~v~~~~gg~~a~~~al~~~~~~~~~-~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~ 168 (397)
T 2ord_A 92 SKNT--FGGKVFFANTGTEANEAAIKIARKYGKK-KSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYF 168 (397)
T ss_dssp HHTT--TSCEEEEESSHHHHHHHHHHHHHHHHHH-HCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEE
T ss_pred HHhc--CCCeEEEeCCHHHHHHHHHHHHHHHhhc-CCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEe
Confidence 9998 4689999999999999999988753211 112567899999999998775555554443444444554555555
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
+.+ |+++|+++++ +++++|++++ ++|++|.+.++.+.+++|.++|++||+++|+||+|+
T Consensus 169 ~~~-----------------d~~~l~~~l~---~~~~~v~~~~-~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 227 (397)
T 2ord_A 169 EFN-----------------NVEDLRRKMS---EDVCAVFLEP-IQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC 227 (397)
T ss_dssp CTT-----------------CHHHHHHHCC---TTEEEEEECS-EECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCC-----------------CHHHHHHHhh---cCeEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 543 7899998885 5799999999 999999768899999999999999999999999999
Q ss_pred CCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 247 g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
|+++.|..+.++.++..||+++|||++++| +|+|+++++++++ .+.. ..+..+++.++++++++.++|+.++
T Consensus 228 ~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~r~G~~~~~~~~~-~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~ 299 (397)
T 2ord_A 228 GMGRTGKLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIVNERAN-VLEP------GDHGTTFGGNPLACRAGVTVIKELT 299 (397)
T ss_dssp TTTTTSSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECSTTC-CCCT------TSSCCSSTTCHHHHHHHHHHHHHHT
T ss_pred CCccCccchhhhhhCCCCCeeeeccccCCC-cCeEEEEEchHhc-ccCC------CCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 998887655555667779999999999988 7999999998876 5542 2356788899999999999999877
Q ss_pred hcCHHHHHHHHHHHHHHHHHchh-cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEe
Q psy14484 327 KDNILQRISQDMKKITKALTSLI-THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLM 404 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~ 404 (430)
+++..++++++.+++.+.|+++. .++.+...++.|.++++.+. .+. . +.++.+.|+++||.+.++ .+.+|++
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~--~---~~~l~~~l~~~gi~v~~~~~~~iRis 373 (397)
T 2ord_A 300 KEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR-EEV--S---NREVATKCFENKLLVVPAGNNTIRFL 373 (397)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC-TTS--C---HHHHHHHHHHTTEECEEETTTEEEEC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC-ChH--H---HHHHHHHHHHCCCEEccCCCCEEEEE
Confidence 67788999999999999998873 45655556778899988876 421 1 367899999999999987 4799999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++.++++++++++++|++++++
T Consensus 374 ~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 374 PPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCcCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998875
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=2.5e-44 Score=349.04 Aligned_cols=370 Identities=26% Similarity=0.436 Sum_probs=302.0
Q ss_pred ccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHh
Q psy14484 9 KKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS 88 (430)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 88 (430)
.+...|.++.+++|+ ++||.+|+.|+||.++.+++++||.+|++++++.+++....... ..+..+...++++.+++
T Consensus 23 ~~~~~~~~~~~~~g~---~~~d~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~la~ 98 (395)
T 1vef_A 23 VYNKHDLLIVRGQGA---RVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMP-QTLPTPMRGEFYRTLTA 98 (395)
T ss_dssp CSCCCSSCEEEEEBT---EEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC-TTSCCHHHHHHHHHHHH
T ss_pred ccCCCCccEEecccC---EEEeCCCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCc-cccCCHHHHHHHHHHHH
Confidence 345578889999887 79999999999999998889999999999999999998754322 23567888999999999
Q ss_pred hcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 89 ~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
.++.+++++++++||++|++.++++++.+. +++.||+++++||+.........+...++..+.++..+...++.
T Consensus 99 ~~~~~~~~v~~~~gg~~a~~~al~~~~~~~------~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~ 172 (395)
T 1vef_A 99 ILPPELNRVFPVNSGTEANEAALKFARAHT------GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY 172 (395)
T ss_dssp TSCTTEEEEEEESSHHHHHHHHHHHHHHHH------SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT
T ss_pred hcCCCcCEEEEcCcHHHHHHHHHHHHHHHh------CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC
Confidence 997777899999999999999999875332 56789999999999876555555433333333444444444443
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|+++++ +++++|+++| +++++|.+.++++++++|.++|++||+++|+||+|+|+
T Consensus 173 ~-----------------d~~~l~~~i~---~~~~~v~~~~-~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~ 231 (395)
T 1vef_A 173 N-----------------DVEALKRAVD---EETAAVILEP-VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGM 231 (395)
T ss_dssp T-----------------CHHHHHHHCC---TTEEEEEECS-EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred C-----------------cHHHHHHHhc---cCEEEEEEeC-ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 2 7899999885 4789999999 99999988899999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
++.|..+.++..++.+|+++|||.+++| +|+|++++++++++.+.. ..+..+++.++++++++.++|+.++++
T Consensus 232 ~~~g~~~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~al~~~~~~ 304 (395)
T 1vef_A 232 GRTGKRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPK------GGHGTTFGGNPLAMAAGVAAIRYLERT 304 (395)
T ss_dssp TTTSSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCT------TSSCCSSTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCchhHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhcc------CCcCCCcCCCHHHHHHHHHHHHHHHhC
Confidence 8877655556667789999999999988 799999999998777654 125677888999999999999877666
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeecC-CEEEEeCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPIG-NTVYLMPP 406 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~~-~~lR~~~~ 406 (430)
++.++++++.+++.+.|+++. .+.+...++.|.++++.+. .+ +..+.+.|. ++||.+.+++ +++|++++
T Consensus 305 ~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~g~~~~~~~~-~~-------~~~l~~~l~~~~gi~v~~~~~~~iRi~~~ 375 (395)
T 1vef_A 305 RLWERAAELGPWFMEKLRAIP-SPKIREVRGMGLMVGLELK-EK-------AAPYIARLEKEHRVLALQAGPTVIRFLPP 375 (395)
T ss_dssp TTHHHHHHHHHHHHHHHHTSC-CTTEEEEEEETTEEEEEES-SC-------SHHHHHHHHHHHCEECEESSTTEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHhh-cCceEEEEEEEEEEEEEEc-Ch-------HHHHHHHHHHHCCeEEecCCCCEEEEeCC
Confidence 788999999999999998762 2444445677888888876 42 256888998 8999999874 79999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy14484 407 YILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l 425 (430)
+.++++++++++++|++++
T Consensus 376 ~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 376 LVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 9999999999999998875
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.4e-42 Score=334.35 Aligned_cols=369 Identities=30% Similarity=0.486 Sum_probs=293.6
Q ss_pred ccCCCceeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHh
Q psy14484 9 KKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS 88 (430)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 88 (430)
.+.+.|.++.+++|. +++|.+|+.|+||.++.+.+.+||.+|++.+++.+++.+..... ..++.+...++++.+++
T Consensus 6 ~~~~~~~~~~~~~g~---~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~-~~y~~~~~~~l~~~la~ 81 (375)
T 2eh6_A 6 NYARLPVKFVRGKGV---YLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVS-NLYENPWQEELAHKLVK 81 (375)
T ss_dssp CCCCEEEEEEEEEBT---EEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCC-TTBCCHHHHHHHHHHHH
T ss_pred cCcCCCccEEeeecC---EEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccC-cccCCHHHHHHHHHHHh
Confidence 345578899999887 79999999999999998878999999999999999987653222 23556777899999999
Q ss_pred hcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC
Q psy14484 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT 168 (430)
Q Consensus 89 ~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
.++. ++++++++||++|++.++++++.... ++++++++|++.+++||++........+...++..+.+...++..++.
T Consensus 82 ~~g~-~~~v~~~~g~t~a~~~~~~~~~~~~~-~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (375)
T 2eh6_A 82 HFWT-EGKVFFANSGTESVEAAIKLARKYWR-DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL 159 (375)
T ss_dssp TSSS-CEEEEEESSHHHHHHHHHHHHHHHHH-HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT
T ss_pred hcCC-CCeEEEeCchHHHHHHHHHHHHHHhc-cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC
Confidence 9865 38999999999999999987543211 122355899999999999977666555443333233333334444443
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+ |+++|+++++ +++++|+++| +++++|.+.++++++++|.++|++||+++|+||+|++|
T Consensus 160 ~-----------------d~~~l~~~l~---~~~~~v~~~~-~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (375)
T 2eh6_A 160 N-----------------DIDSVYKLLD---EETAGIIIEV-IQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGI 218 (375)
T ss_dssp T-----------------CHHHHHTTCC---TTEEEEEECS-EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred c-----------------hHHHHHHHhc---CCeEEEEEeC-ccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 3 7889888875 5789999999 99999988899999999999999999999999999999
Q ss_pred CCcccccccccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
++.+..+..+.++..+|+++|||.+++| +++|++++++++++.+.. ..+..+++.++++++++.++|+.++
T Consensus 219 ~~~~~~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~-- 289 (375)
T 2eh6_A 219 GRTGEFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTP------GSHGSTFGGNPLACRAGTVVVDEVE-- 289 (375)
T ss_dssp TTTSSSSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCT------TSCCCSSTTCHHHHHHHHHHHHHHH--
T ss_pred CCCCcchhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcC------CCCCCCCCCCHHHHHHHHHHHHHHH--
Confidence 8877555556667779999999999988 799999999988776654 2356778889999998888888765
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-CCEEEEeCCC
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPY 407 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~ 407 (430)
++.++++++.+++.+.|+++. . ...++.|.++++.+. .+ +.++++.|.++||.+.++ .+++|+++++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~---~-~~~~~~g~~~~~~~~-~~-------~~~~~~~l~~~gi~~~~~~~~~iRi~~~~ 357 (375)
T 2eh6_A 290 KLLPHVREVGNYFKEKLKELG---K-GKVKGRGLMLGLELE-RE-------CKDYVLKALEKGLLINCTAGKVLRFLPPL 357 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---S-SEEEEETTEEEEECS-SC-------CHHHHHHHHHTTEECEEETTTEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHh---c-CCceEEEEEEEEEEc-Cc-------HHHHHHHHHHCCCEEecCCCCEEEEECCC
Confidence 677888889999999988762 2 245677888888776 42 256888999999999986 5899999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l 425 (430)
.++++++++++++|++++
T Consensus 358 ~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 358 IIQKEHIDRAISVLREIL 375 (375)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 999999999999998753
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=7.1e-37 Score=299.08 Aligned_cols=360 Identities=14% Similarity=0.084 Sum_probs=264.1
Q ss_pred ccccCCCceeEEeecCCceeEEEECC--CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHH
Q psy14484 7 FKKKSSNNLVIRSLKNSWKWSLIDVS--GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSE 84 (430)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~d~~--g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (430)
++.+...+.+.++++++ ++||.+ |++||||..+ ...+ +.+|+|++++.+++....+.+. ....+..+++++
T Consensus 35 m~~y~~~~~~~~~g~g~---~~~d~~~~g~~~i~~~~~--~~~~-~~~~~v~~a~~~~~~~~~~~y~-~~~~~l~~~l~~ 107 (421)
T 3l8a_A 35 MGRYDFTTRPDRLNQFT---YKWKTSENNPELLQMWVA--DMDF-LPVPEIKEAIINYGREHIFGYN-YFNDDLYQAVID 107 (421)
T ss_dssp ---CCCSCCCCCTTTTB---TTTGGGTTCTTCEECCSS--CCCS-CCCHHHHHHHHHHHHHCCSSCB-CCCHHHHHHHHH
T ss_pred hhhccCCcccccCCCCC---ccccccCCCCCeeecccC--CCCC-CCCHHHHHHHHHHHhcCCcCCC-CCCHHHHHHHHH
Confidence 33466677888888777 699999 8999999765 3344 4899999999999876432221 233677788999
Q ss_pred HHHhhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC
Q psy14484 85 KLSSLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK 162 (430)
Q Consensus 85 ~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 162 (430)
++.+.++ .++++|+|++|++||++.|+++++. ++++|++.+++||++.......+. .
T Consensus 108 ~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~--------~gd~Vi~~~~~y~~~~~~~~~~g~-------------~ 166 (421)
T 3l8a_A 108 WERKEHDYAVVKEDILFIDGVVPAISIALQAFSE--------KGDAVLINSPVYYPFARTIRLNDH-------------R 166 (421)
T ss_dssp HHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--------TEEEEEEEESCCHHHHHHHHHTTE-------------E
T ss_pred HHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC--------CCCEEEECCCCcHHHHHHHHHCCC-------------E
Confidence 9988876 5678999999999999999998754 568899999999997654443221 1
Q ss_pred eeEeCCC--C-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEE
Q psy14484 163 TYIITTP--D-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHL 239 (430)
Q Consensus 163 ~~~~~~~--~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~l 239 (430)
...+++. + .+.. |+++|++++++ +++++|++++ ++|++| ..++++++++|.++|++||++|
T Consensus 167 ~~~~~~~~~~~~~~~------------d~~~le~~i~~--~~~~~vil~~-p~nptG-~~~~~~~l~~l~~l~~~~~~~l 230 (421)
T 3l8a_A 167 LVENSLQIINGRFEI------------DFEQLEKDIID--NNVKIYLLCS-PHNPGG-RVWDNDDLIKIAELCKKHGVIL 230 (421)
T ss_dssp EEEEECEEETTEEEC------------CHHHHHHHHHH--TTEEEEEEES-SBTTTT-BCCCHHHHHHHHHHHHHHTCEE
T ss_pred EEeccccccCCCeee------------CHHHHHHHhhc--cCCeEEEECC-CCCCCC-CcCCHHHHHHHHHHHHHcCCEE
Confidence 2233321 1 0111 88999999974 4789999999 999999 7788888999999999999999
Q ss_pred EEeccccCCCCccccc-cc-----ccCCCCCceeeeecccC-CCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCC
Q psy14484 240 IADEIAVGCGRTGKFF-AC-----EHAEIWPDFLCLSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGN 311 (430)
Q Consensus 240 i~DEv~~g~g~~g~~~-~~-----~~~~~~~d~~~~sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~ 311 (430)
|+||+|++++++|... .+ +..+..+++.++||+++ +| +|+|+++++ +++++.+... .....+++++
T Consensus 231 i~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~-----~~~~~~~~~n 304 (421)
T 3l8a_A 231 VSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYR-----QLANNQHEVP 304 (421)
T ss_dssp EEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHH-----HHHTTCSCCC
T ss_pred EEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHH-----HHhcccCCCC
Confidence 9999999998877421 11 11244466888999998 56 799999998 8888877650 1133456789
Q ss_pred HHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE-EEEeecCCccchhHHHHHHHHHH
Q psy14484 312 PLACCAALATLEIFNK--DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQIETFSKKFFVAAL 388 (430)
Q Consensus 312 ~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~a~~~~~~l~ 388 (430)
+++++++.++++..++ ++..++++++.+++.+.|+++ +.+...++.|.++. +++. ..... +.++.+.|+
T Consensus 305 ~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~i~~~~~~~~~~~~v~~~-~~~~~----~~~l~~~l~ 376 (421)
T 3l8a_A 305 TVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAK---TKIKVMEPEGTYLVWLDFS-AYAIA----QPQLSEKLQ 376 (421)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSCEEECCSBSSEEEEECG-GGTCC----TTHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceEeCCCeeEEEEEecc-ccCCC----HHHHHHHHH
Confidence 9999999988874221 344556666777777777654 55566677777776 6665 31111 246888887
Q ss_pred H-CCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 389 K-NELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 389 ~-~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+ .||.+.++ .+++||+++ +++++|++++++|+++++
T Consensus 377 ~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 377 NEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp HTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred HhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 5 59999874 378999877 699999999999998875
No 41
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.1e-33 Score=276.97 Aligned_cols=346 Identities=14% Similarity=0.076 Sum_probs=256.2
Q ss_pred ceeEE-eecCCceeEEEECCCCEEEecccccccccCC-CCCHHHHHHHHHHHhhcccc-c---cCCCCCHHHHHHHHHHH
Q psy14484 14 NLVIR-SLKNSWKWSLIDVSGKRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEHV-M---LSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 14 ~~~~~-~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~-~---~~~~~~~~~~~l~~~l~ 87 (430)
+.++. +++|+ +++| ||++|+||.+| .++| +.+|++++++.+++.+.... . ...+..+...++++.++
T Consensus 47 ~~~~~~~~~g~---~~~~-~g~~~id~~~~---~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la 119 (427)
T 2w8t_A 47 AIVMEQVKSPT---EAVI-RGKDTILLGTY---NYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALR 119 (427)
T ss_dssp CCCCSEEEETT---EEEE-TTEEEEECSCC---CTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHH
T ss_pred eeeccccCCCc---eEee-CCceEEEEECc---ccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHH
Confidence 34555 77776 7999 99999999998 3689 68999999999998774321 1 11234688899999999
Q ss_pred hhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 88 ~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
++++ .+++++++||++|+..+++++.. +++.|++..+ +|+.........+ .....+
T Consensus 120 ~~~g--~~~~i~~~sGs~a~~~al~~l~~--------~gd~vl~~~~-~h~~~~~~~~~~g------------~~~~~~- 175 (427)
T 2w8t_A 120 DFYG--TTGAIVFSTGYMANLGIISTLAG--------KGEYVILDAD-SHASIYDGCQQGN------------AEIVRF- 175 (427)
T ss_dssp HHHT--CSEEEEESCHHHHHHHHHHHHSC--------TTCEEEEETT-CCHHHHHHHHHSC------------SEEEEE-
T ss_pred HHhC--CCceEEecCcHHHHHHHHHHhcC--------CCCEEEECCc-ccHHHHHHHHHcC------------CeeEEe-
Confidence 9995 45888899999999999887643 4556666554 5555443333222 122233
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC-CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNHN-KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
|. +|+++|++++++..+ ++++|++++ +++++|.+.+ +++|.++|++||+++|+||+|+
T Consensus 176 -~~---------------~d~~~le~~l~~~~~~~~~~v~~~~-~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~ 234 (427)
T 2w8t_A 176 -RH---------------NSVEDLDKRLGRLPKEPAKLVVLEG-VYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHS 234 (427)
T ss_dssp -CT---------------TCHHHHHHHHHTSCSSSCEEEEEES-EETTTTEECC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred -CC---------------CCHHHHHHHHHhccCCCCeEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEECCcc
Confidence 32 288999999986533 789999999 9999998877 9999999999999999999999
Q ss_pred CC--CCcccccccccCCCCCc----eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHH
Q psy14484 247 GC--GRTGKFFACEHAEIWPD----FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320 (430)
Q Consensus 247 g~--g~~g~~~~~~~~~~~~d----~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~ 320 (430)
++ +++|.. ..+.+++.+| +.+|||+++ .+.|++++++++++.+.. ..+++ ..+.+.+++.++++.+
T Consensus 235 ~~~~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~--~~~~~--~~~~~~~~~~~aa~~~ 306 (427)
T 2w8t_A 235 MGFFGPNGRG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRL--ACRPY--IFTASLPPSVVATATT 306 (427)
T ss_dssp TTTSSTTSCC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGG--TCHHH--HSSCCCCHHHHHHHHH
T ss_pred ccccCCCCCc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHH--hcccc--cccCCCCHHHHHHHHH
Confidence 64 222332 2344565555 668999986 356999999998887765 11122 2355678888888889
Q ss_pred HHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC
Q psy14484 321 TLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG 398 (430)
Q Consensus 321 ~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~ 398 (430)
+|+.++. ++..++++++.+++.+.|+++ ..+.. ..+ .|.++++.+. +. ..+.++++.|.++||.+.++.
T Consensus 307 al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~-~~-----~~~~~l~~~L~~~Gi~v~~~~ 377 (427)
T 2w8t_A 307 SIRKLMTAHEKRERLWSNARALHGGLKAM-GFRLG--TETCDSAIVAVMLE-DQ-----EQAAMMWQALLDGGLYVNMAR 377 (427)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEES--CSSCCSSEEEEEES-SH-----HHHHHHHHHHHHTTEECEEEC
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCCCCCEEEEEEC-CH-----HHHHHHHHHHHHCCeEEeeeC
Confidence 9988764 567888999999999999876 32221 123 6778877776 31 114679999999999998752
Q ss_pred --------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 --------NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 --------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+||+++..++++++++++++|+++++++
T Consensus 378 ~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 378 PPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp TTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 489999999999999999999999998765
No 42
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=5.8e-33 Score=269.20 Aligned_cols=347 Identities=15% Similarity=0.182 Sum_probs=256.6
Q ss_pred CceeEEeecCCceeEEEECCCCEEEecccccccccCC-CCCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~ 87 (430)
.+..+.+++|. +++| +|++|+||.++ +++| |.+|++.+++.+++.+..... ...+..+...++++.++
T Consensus 26 ~~~~~~~~~g~---~v~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la 98 (399)
T 3tqx_A 26 SERIITSPQNA---EIKV-GEKEVLNFCAN---NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDIS 98 (399)
T ss_dssp CCCCBCSCSSS---EEEE-TTEEEEECSSC---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHH
T ss_pred ccccccCCCCc---eEee-CCeeEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHH
Confidence 34566677666 7999 99999999997 6788 689999999999988754321 11235677899999999
Q ss_pred hhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC
Q psy14484 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT 167 (430)
Q Consensus 88 ~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
+.++ .++.+++++|++|+..+++++.. +++.|++..++|.+. .......+ .....++
T Consensus 99 ~~~~--~~~~i~~~sGt~a~~~~l~~~~~--------~gd~v~~~~~~~~~~-~~~~~~~g------------~~~~~~~ 155 (399)
T 3tqx_A 99 EFLG--TDDTILYSSCFDANGGLFETLLG--------PEDAIISDELNHASI-IDGIRLCK------------AQRYRYK 155 (399)
T ss_dssp HHHT--CSEEEEESCHHHHHHTTHHHHCC--------TTCEEEEETTCCHHH-HHHHHSCC------------SEEEEEC
T ss_pred HHHC--CCcEEEECchHHHHHHHHHHhcC--------CCCEEEECCcccHHH-HHHHHHcC------------CceeEeC
Confidence 9995 34667777889999999887753 566777777666543 33333222 1223333
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC---CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 168 TPDSRNINKGNSANEIARCAIFDLEILLKKNHN---KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
.. |+++|+++++++.. ++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+
T Consensus 156 ~~-----------------d~~~l~~~l~~~~~~~~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~De~ 213 (399)
T 3tqx_A 156 NN-----------------AMGDLEAKLKEADEKGARFKLIATDG-VFSMDGIIAD----LKSICDLADKYNALVMVDDS 213 (399)
T ss_dssp TT-----------------CTTHHHHHHHHHHTTTCSSEEEEEES-EETTTTEECC----HHHHHHHHHHTTCEEEEECT
T ss_pred CC-----------------CHHHHHHHHHhhhccCCCceEEEEeC-CCCCCCCcCC----HHHHHHHHHHcCCEEEEECC
Confidence 32 56788888876422 789999999 9999998877 99999999999999999999
Q ss_pred cc-CC-CCcccccccccCCC--CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 245 AV-GC-GRTGKFFACEHAEI--WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 245 ~~-g~-g~~g~~~~~~~~~~--~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
|+ |+ +..+. ...+..++ .+|++ ++||.++ | .+.|++++++++++.+... ...+ ..+.+.++++++++
T Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~di~~~s~sK~~~-g-~~gG~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~ 286 (399)
T 3tqx_A 214 HAVGFIGENGR-GTPEYCGVADRVDILTGTLGKALG-G-ASGGYTSGHKEIIEWLRNR--SRPY--LFSNTVAPVIVATS 286 (399)
T ss_dssp TTTTTSSTTSC-CHHHHHTCTTCCSEEEEESSSSSC-S-SCCEEEEECHHHHHHHHHH--CHHH--HSSCCCCHHHHHHH
T ss_pred ccccccCCCCC-chHHhhCCCCCCcEEEecchHhcc-c-CceEEEEcCHHHHHHHHHh--Ccce--eccCCCcHHHHHHH
Confidence 95 44 33332 23444554 67888 8999998 4 5789999999998887651 1111 22346688888888
Q ss_pred HHHHHHH-h-hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee
Q psy14484 319 LATLEIF-N-KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP 396 (430)
Q Consensus 319 ~~~l~~~-~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~ 396 (430)
.++++.+ + .++..++++++.+++.+.|+++ ..+ ..++.|.++++.+. .. ..+.++++.|.++||.+.+
T Consensus 287 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~gi~v~~ 356 (399)
T 3tqx_A 287 LKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQ---LVPGNHPIIPVMLG-DA-----QLATNMADHLLQEGIYVVG 356 (399)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCC---BCCCSSSEEEEEEE-CH-----HHHHHHHHHHHHTTEECCE
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCC---cCCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCCEEee
Confidence 8888866 3 3567788889999999999877 322 23567888888776 31 1146899999999999985
Q ss_pred c--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 I--------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 ~--------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
. .+++|++++..++++++++++++|+++++++
T Consensus 357 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 357 FSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp ECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 3 1489999999999999999999999998764
No 43
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-33 Score=271.00 Aligned_cols=357 Identities=13% Similarity=0.059 Sum_probs=253.9
Q ss_pred eeEEeecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC--C
Q psy14484 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--Y 92 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~ 92 (430)
.+.++++++ ++||.+|++||||..+ ...+ ..+|+|.+++.+++......+. ....+..+++++.+.+.++ .
T Consensus 11 ~~~~~~~g~---~~~d~~g~~~i~~~~~--~~~~-~~~~~v~~a~~~~~~~~~~~y~-~~~~~l~~~la~~l~~~~g~~~ 83 (391)
T 3dzz_A 11 HVPKRQGNS---IKWGVLKEKELPMWIA--EMDF-KIAPEIMASMEEKLKVAAFGYE-SVPAEYYKAVADWEEIEHRARP 83 (391)
T ss_dssp SCCCCCTTB---TTTTTCCTTCEECCSS--CCSS-CCCHHHHHHHHHHHTTCCCCCB-CCCHHHHHHHHHHHHHHHSCCC
T ss_pred hhccCCCCc---cceeccCCCceecccc--CCCC-CCCHHHHHHHHHHHhcCcCCCC-CCCHHHHHHHHHHHHHHhCCCC
Confidence 566677666 6999999999999877 3444 4899999999999876432221 2245677888888888875 5
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CC
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DS 171 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 171 (430)
++++|++++||++|++.+++++.. +++.|++.+++||++.......+. ....++.+ ..
T Consensus 84 ~~~~i~~~~g~~~a~~~~~~~l~~--------~gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~~~~ 142 (391)
T 3dzz_A 84 KEDWCVFASGVVPAISAMVRQFTS--------PGDQILVQEPVYNMFYSVIEGNGR-------------RVISSDLIYEN 142 (391)
T ss_dssp CGGGEEEESCHHHHHHHHHHHHSC--------TTCEEEECSSCCHHHHHHHHHTTC-------------EEEECCCEEET
T ss_pred CHHHEEECCCHHHHHHHHHHHhCC--------CCCeEEECCCCcHHHHHHHHHcCC-------------EEEEeeeeecC
Confidence 678999999999999999998754 568899999999987544433222 22233331 00
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
... ..|+++|++++++ .++++|+++. ++|++|. .++.+.+++|.++|++||+++|+||+|+++.+.
T Consensus 143 ~~~----------~~d~~~l~~~l~~--~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 208 (391)
T 3dzz_A 143 SKY----------SVNWADLEEKLAT--PSVRMMVFCN-PHNPIGY-AWSEEEVKRIAELCAKHQVLLISDEIHGDLVLT 208 (391)
T ss_dssp TEE----------ECCHHHHHHHHTS--TTEEEEEEES-SBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred Cce----------eecHHHHHHHHhc--cCceEEEEEC-CCCCCCc-ccCHHHHHHHHHHHHHCCCEEEEecccccccCC
Confidence 000 0188999999963 4788888888 8899995 556777999999999999999999999988777
Q ss_pred cc-ccccccCCC-CCc----eeeeecccC-CCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 252 GK-FFACEHAEI-WPD----FLCLSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 252 g~-~~~~~~~~~-~~d----~~~~sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
|. ...+..... .+| +.++||.++ +| +++|+++++ +++++.+.. ......+++.++++++++.++++
T Consensus 209 g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~l~ 282 (391)
T 3dzz_A 209 DEDITPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEE-----SFFLAGIGEPNLLAIPAAIAAYE 282 (391)
T ss_dssp SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHH-----HHHHHTCSSCCTTHHHHHHHHHH
T ss_pred CCCceehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHH-----HHHhhccCCCCHHHHHHHHHHHh
Confidence 64 233333332 267 557899997 56 799999997 888887765 01123456778888888888886
Q ss_pred HHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEE-EEEEeecCCccchhHHHHHHHHHH-HCCcEEeec--
Q psy14484 324 IFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-- 397 (430)
Q Consensus 324 ~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-- 397 (430)
..+ .+...++++++.+++.+.|++. .+.+....+.+.++ ++.+. .... . +.++.+.|+ ++||.+.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~~gi~v~~g~~ 355 (391)
T 3dzz_A 283 EGHDWLRELKQVLRDNFAYAREFLAKE--VPEVKVLDSNASYLAWVDIS-ALGM-N---AEDFCKYLREKTGLIISAGNG 355 (391)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSEECCCCBSSEEEEECG-GGCS-C---HHHHHHHHHHHHCEECEESGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcEEeccCceEEEEEehh-hcCC-C---HHHHHHHHHHhCCEEEeCchh
Confidence 422 2345566677777777777652 23333334444444 45554 3111 1 367899996 889999874
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++ ++++++++++++|+++++++
T Consensus 356 ~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 356 YRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp GCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred hCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 268999877 69999999999999998764
No 44
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.4e-33 Score=271.47 Aligned_cols=346 Identities=11% Similarity=0.047 Sum_probs=244.5
Q ss_pred eecCCceeEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC--CCCCe
Q psy14484 19 SLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGH 96 (430)
Q Consensus 19 ~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~ 96 (430)
+++|+ ++||.+|++||||.++ .+.++ .+|+|.+++.+++......+.... .+..+.+++.+.+.++ .++++
T Consensus 11 ~~~g~---~~~d~~g~~~idl~~~--~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~ 83 (377)
T 3fdb_A 11 RARNT---MKWTRYGQGVLPLWVA--ESDFS-TCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEW 83 (377)
T ss_dssp HHTCC---HHHHSSCTTSEECCSS--CCCSC-CCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGG
T ss_pred cCCCC---ceeeccCCCeeeeccc--CCCCC-CCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHH
Confidence 45555 7999999999999987 45555 789999999999876322222122 5667777777776554 46789
Q ss_pred EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCC
Q psy14484 97 CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINK 176 (430)
Q Consensus 97 v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
+++++||++|++.+++.+.. +++.|++..++||++.......+ .....++.+.. .
T Consensus 84 i~~t~g~~~a~~~~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~--~-- 138 (377)
T 3fdb_A 84 IFPIPDVVRGLYIAIDHFTP--------AQSKVIVPTPAYPPFFHLLSATQ-------------REGIFIDATGG--I-- 138 (377)
T ss_dssp EEEESCHHHHHHHHHHHHSC--------TTCCEEEEESCCTHHHHHHHHHT-------------CCEEEEECTTS--C--
T ss_pred EEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCCcHhHHHHHHHcC-------------CEEEEccCCCC--C--
Confidence 99999999999999998754 56789999999998754433322 22344444322 1
Q ss_pred CCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-c-c
Q psy14484 177 GNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-K-F 254 (430)
Q Consensus 177 ~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g-~-~ 254 (430)
|+++|++++++ +++++++.. ++|++|. .++.+.+++|.++|++||+++|+||+|+++.+.| . .
T Consensus 139 ----------d~~~l~~~l~~---~~~~v~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 203 (377)
T 3fdb_A 139 ----------NLHDVEKGFQA---GARSILLCN-PYNPLGM-VFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTV 203 (377)
T ss_dssp ----------CHHHHHHHHHT---TCCEEEEES-SBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCC
T ss_pred ----------CHHHHHHHhcc---CCCEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCc
Confidence 88999999974 355666666 7888885 5567779999999999999999999999887766 2 1
Q ss_pred ---cccccCCCCCceeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--
Q psy14484 255 ---FACEHAEIWPDFLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-- 327 (430)
Q Consensus 255 ---~~~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-- 327 (430)
..+...+..+++.++||.++ +| +|+|++++ ++++++.+.. .....+++.++++++++.++|+..++
T Consensus 204 ~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 276 (377)
T 3fdb_A 204 AAGVSDTAASVCITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQ------LSPVIKDGASTLGLIAAEAAYRYGTDFL 276 (377)
T ss_dssp GGGSCHHHHHHEEEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHH------SCHHHHCCCCHHHHHHHHHHHHHCHHHH
T ss_pred ccHHHccCCCcEEEEEeChHhccCcc-hhheEEEeCCHHHHHHHHH------HHHhhcCCCCHHHHHHHHHHHhccHHHH
Confidence 11111222355668999996 46 79998776 7888877765 23445678899999888888874221
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEE-EEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-------C
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-------G 398 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-------~ 398 (430)
++..++++++.+++.+.|++. .+.+....+.+.++ ++.+. .... . .++.+.|+++ ||.+.++ .
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~----~~~~~~l~~~~gi~v~~g~~~~~~~~ 348 (377)
T 3fdb_A 277 NQEVAYLKNNHDFLLHEIPKR--IPGAKITPMQATYLMWIDFR-DTTI-E----GSPSEFFIEKAKVAMNDGAWFGEDGT 348 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--STTCEECCCSBCSEEEEECT-TSCC-C----SCHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhh--CCCceEecCCeeEEEEEECc-ccCC-C----HHHHHHHHHhCCEEecCChhccCCCC
Confidence 345566677777777777652 23333444555555 46655 3211 1 2466777665 9999875 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++|++++ .+++++++++++|++++.+.
T Consensus 349 ~~~Ris~~--~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 349 GFCRLNFA--TSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp TEEEEECC--SCHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 78999877 48999999999999988753
No 45
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.5e-32 Score=264.04 Aligned_cols=349 Identities=14% Similarity=0.167 Sum_probs=254.4
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccccc-CC---CCCHHHHHHHHHH
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVML-SN---LTHKPVIKLSEKL 86 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-~~---~~~~~~~~l~~~l 86 (430)
..+.++.+++|. +++|.+|++|+||.++ +++|+ .+|++.+++.+++..+..... .. ...+...++++.+
T Consensus 26 ~~~~~~~~~~g~---~~~~~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l 99 (401)
T 1fc4_A 26 KEERIITSAQQA---DITVADGSHVINFCAN---NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKL 99 (401)
T ss_dssp CCCCCBCSCSSS---EEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHH
T ss_pred eeeeeeccCCCc---eEEeeCCccEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHH
Confidence 346777777776 7999999999999998 46997 799999999999876432110 01 1257788999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.++.+ +.+++++|++|+..+++++.. +++.|++..++| +.........+ .....+
T Consensus 100 a~~~g~~--~~i~~~sGs~a~~~~~~~~~~--------~gd~v~~~~~~~-~~~~~~~~~~g------------~~~~~~ 156 (401)
T 1fc4_A 100 AAFLGME--DAILYSSCFDANGGLFETLLG--------AEDAIISDALNH-ASIIDGVRLCK------------AKRYRY 156 (401)
T ss_dssp HHHHTCS--EEEEESCHHHHHHTTHHHHCC--------TTCEEEEETTCC-HHHHHHHHTSC------------SEEEEE
T ss_pred HHHhCCC--cEEEeCChHHHHHHHHHHHcC--------CCCEEEEcchhH-HHHHHHHHHcC------------CceEEE
Confidence 9999644 666778889999999887743 456666666554 44333332222 122233
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC---CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHN---KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
+.. |+++|++++++..+ ++++|++++ ++|++|.+.+ +++|.++|++||+++|+||
T Consensus 157 ~~~-----------------d~~~l~~~l~~~~~~~~~~~~v~~~~-~~nptG~~~~----~~~i~~l~~~~~~~li~De 214 (401)
T 1fc4_A 157 ANN-----------------DMQELEARLKEAREAGARHVLIATDG-VFSMDGVIAN----LKGVCDLADKYDALVMVDD 214 (401)
T ss_dssp CTT-----------------CHHHHHHHHHHHHHTTCSSEEEEEES-EETTTTEECC----HHHHHHHHHHTTEEEEEEC
T ss_pred CCC-----------------CHHHHHHHHHHhhccCCCceEEEEeC-CcCCCCCCCC----HHHHHHHHHHcCCEEEEEC
Confidence 321 67888888875322 688999999 9999998877 9999999999999999999
Q ss_pred ccc-CCC-CcccccccccCCCC--Ccee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHH
Q psy14484 244 IAV-GCG-RTGKFFACEHAEIW--PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317 (430)
Q Consensus 244 v~~-g~g-~~g~~~~~~~~~~~--~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a 317 (430)
+|+ |+. ++|..+ .+..++. .|++ ++||.++++. .|++++++++++.+... ..+ +..+++.+++++++
T Consensus 215 ~~~~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~--gG~~~~~~~~~~~l~~~--~~~--~~~~~~~~~~~~~a 287 (401)
T 1fc4_A 215 SHAVGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQR--SRP--YLFSNSLAPAIVAA 287 (401)
T ss_dssp TTTTTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHHH--CHH--HHHSCCCCHHHHHH
T ss_pred cccccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC--CEEEEcCHHHHHHHHHh--CcC--ceeCCCCCHHHHHH
Confidence 995 773 345432 2223333 4776 7899997652 59999999998877651 001 22356778999999
Q ss_pred HHHHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee
Q psy14484 318 ALATLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP 396 (430)
Q Consensus 318 a~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~ 396 (430)
+.++|+.++. ++..++++++.+++.+.|+++ ..+. .++.|.++++.+. .. ..+.++.+.|.++||.+.+
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~-~~-----~~~~~l~~~l~~~gi~v~~ 357 (401)
T 1fc4_A 288 SIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTL---AGADHAIIPVMLG-DA-----VVAQKFARELQKEGIYVTG 357 (401)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCB---CCSSSSEEEEEEE-CH-----HHHHHHHHHHHHTTEECCE
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcc---cCCCCCEEEEEcC-Ch-----HHHHHHHHHHHHCCcEEee
Confidence 9999987653 567788889999999999876 3332 2467888888776 31 1146789999999999987
Q ss_pred cC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 IG--------NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 ~~--------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+. +++|++++..++++++++++++|++++.++
T Consensus 358 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 358 FFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp ECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 52 479999999999999999999999998764
No 46
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=1.3e-32 Score=265.24 Aligned_cols=355 Identities=12% Similarity=0.082 Sum_probs=239.6
Q ss_pred CceeEEeecCCceeEEEECC-CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLIDVS-GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~-g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.+.+.++++|+ ++||.+ |++++||..+ ...++ .+|+|.+++.+++......+. ....+..+++++.+++.++
T Consensus 5 ~~~~~~~~~g~---~~~d~~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~~y~-~~~~~~~~~l~~~l~~~~g 77 (383)
T 3kax_A 5 HKTVNRRGTHS---IKWDTYKNEELIHAWIA--DMDFE-VPQPIQTALKKRIEHPIFGYT-LPPENIGDIICNWTKKQYN 77 (383)
T ss_dssp -----------------CCCSSSCCEECCCS--SCSSC-CCHHHHHHHHHHHHSCCCCCC-CCCTTHHHHHHHHHHHHHC
T ss_pred cceeeccCCCc---eeeeccCCCCeeecccc--cCCCC-CCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHHhC
Confidence 45567777776 799955 5899999987 44454 799999999999876322211 2256788899999998876
Q ss_pred --CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC
Q psy14484 92 --YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP 169 (430)
Q Consensus 92 --~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
.+++++++++||++|++.+++++.. +++.|++.+++|+++.......+. ....++.+
T Consensus 78 ~~~~~~~v~~~~g~~~a~~~~~~~l~~--------~gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~~~~~ 136 (383)
T 3kax_A 78 WDIQKEWIVFSAGIVPALSTSIQAFTK--------ENESVLVQPPIYPPFFEMVTTNNR-------------QLCVSPLQ 136 (383)
T ss_dssp CCCCGGGEEEESCHHHHHHHHHHHHCC--------TTCEEEECSSCCHHHHHHHHHTTC-------------EEEECCCE
T ss_pred CCCChhhEEEcCCHHHHHHHHHHHhCC--------CCCEEEEcCCCcHHHHHHHHHcCC-------------EEEeccce
Confidence 5678999999999999999998854 568899999999987544333221 22233322
Q ss_pred CCCC-CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 170 DSRN-INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 170 ~~~~-~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
.... . ..|+++|+++++ +++++++++. ++|++|. ..+.+.+++|.++|++||+++|+||+|+++
T Consensus 137 ~~~~~~----------~~d~~~l~~~l~---~~~~~v~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 201 (383)
T 3kax_A 137 KQNDTY----------AIDFEHLEKQFQ---QGVKLMLLCS-PHNPIGR-VWKKEELTKLGSLCTKYNVIVVADEIHSDI 201 (383)
T ss_dssp EETTEE----------ECCHHHHHHHHT---TTCCEEEEES-SBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred ecCCcE----------EEcHHHHHHHhC---cCCeEEEEeC-CCCCCCc-CcCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 1000 0 017899999994 4677777787 8888885 567788999999999999999999999988
Q ss_pred CCccccc-cccc-----CCCCCceeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHH
Q psy14484 249 GRTGKFF-ACEH-----AEIWPDFLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320 (430)
Q Consensus 249 g~~g~~~-~~~~-----~~~~~d~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~ 320 (430)
.+.|... .+.. .+..+.+.++||.++ +| +|+|++++ ++++.+.+... .....+++.++++++++.+
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~ 275 (383)
T 3kax_A 202 IYADHTHTPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSI-----QYRQGFHGLNIFAYTAMQS 275 (383)
T ss_dssp BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHH-----HHHTTCCCCCHHHHHHHHH
T ss_pred ccCCCCceeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHH-----HhhcccCCCCHHHHHHHHH
Confidence 7766421 1111 133345668999998 56 79999998 67887776640 1123345778898888888
Q ss_pred HHHHHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE-EEEeecCCccchhHHHHHHHHHH-HCCcEEee
Q psy14484 321 TLEIFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQIETFSKKFFVAAL-KNELLLRP 396 (430)
Q Consensus 321 ~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~ 396 (430)
+++..+ .++..++++++.+++.+.|++. .+.+....+.+.++. +.+. .... . ..++++.|+ ++||.+.+
T Consensus 276 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~~gi~v~~ 348 (383)
T 3kax_A 276 AYTECNDWLNEIRFYIEDNAKFACEYIKDH--IPTLSVMKPEGSFLLWIDCS-ALNL-S---QDERTKLLEEKGKIIVEP 348 (383)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTCEECCCSBSSEEEEECG-GGCC-C---HHHHHHHHHHTSCEECEE
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHhh--CCCceEecCCceEEEEEEcc-ccCC-C---HHHHHHHHHhhCCEEeEC
Confidence 876321 1334556666777777777652 234444455555554 5555 3111 1 367899997 68999987
Q ss_pred c-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 397 I-------GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 397 ~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+ .+++|++++ .+++++++++++|++++
T Consensus 349 g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 349 GEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp SGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 4 278999877 58999999999998876
No 47
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=3e-31 Score=257.28 Aligned_cols=347 Identities=15% Similarity=0.127 Sum_probs=253.5
Q ss_pred CCceeEEeecCCceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHH
Q psy14484 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHVM----LSNLTHKPVIKLSEKL 86 (430)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~l 86 (430)
..+.++.+++|. +++ .+|++++||.++. ++|+ .+|++.+++.+++....... ...+..+..+++++.+
T Consensus 25 ~~~~~~~~~~g~---~~~-~~g~~~idl~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l 97 (398)
T 3a2b_A 25 AYFRPIQSKQDT---EVK-IDGRRVLMFGSNS---YLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKL 97 (398)
T ss_dssp CSSCCBCSCSSS---EEE-ETTEEEEECSCSC---TTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHH
T ss_pred cceeeecCCCCc---eEE-ECCceEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHH
Confidence 467788888877 788 8999999999873 3788 79999999999887643211 1233467889999999
Q ss_pred HhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 87 ~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.++ .+++++++||++|++.+++++.. +++.|++.+++|..+... ....+ .....+
T Consensus 98 a~~~g--~~~v~~~~ggt~a~~~~~~~~~~--------~gd~V~~~~p~~~~~~~~-~~~~g------------~~~~~v 154 (398)
T 3a2b_A 98 SAYVG--KEAAILFSTGFQSNLGPLSCLMG--------RNDYILLDERDHASIIDG-SRLSF------------SKVIKY 154 (398)
T ss_dssp HHHHT--CSEEEEESSHHHHHHHHHHHSSC--------TTCEEEEETTCCHHHHHH-HHHSS------------SEEEEE
T ss_pred HHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEECCccCHHHHHH-HHHcC------------CceEEe
Confidence 99984 47999999999999999998753 567788887777654322 22222 122333
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC-CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHN-KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
+.. |+++|++++++..+ ++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|
T Consensus 155 ~~~-----------------d~~~l~~~l~~~~~~~~~~v~~~~-~~nptG~~~~----~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 155 GHN-----------------NMEDLRAKLSRLPEDSAKLICTDG-IFSMEGDIVN----LPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp CTT-----------------CHHHHHHHHHTSCSSSCEEEEEES-BCTTTCCBCC----HHHHHHHHHHHTCEEEEECTT
T ss_pred CCC-----------------CHHHHHHHHHhhccCCceEEEEeC-CCCCCCCccC----HHHHHHHHHHcCcEEEEECCC
Confidence 332 78999999986432 688999999 9999998877 999999999999999999999
Q ss_pred cCC--CCcccccccccCCCC--Ccee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHH
Q psy14484 246 VGC--GRTGKFFACEHAEIW--PDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 319 (430)
Q Consensus 246 ~g~--g~~g~~~~~~~~~~~--~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~ 319 (430)
+.+ ++.+..+ .+.++.. +|++ ++||.++.. .|++++++++++.+... . ..+..+...++..++++.
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~~---GG~~~~~~~~~~~l~~~--~--~~~~~~~~~~~~~~a~~~ 284 (398)
T 3a2b_A 213 SLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLASL---GGFVAGDADVIDFLKHN--A--RSVMFSASMTPASVASTL 284 (398)
T ss_dssp TTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCSS---CEEEEECHHHHHHHHHH--C--HHHHSSBCCCHHHHHHHH
T ss_pred cccccCCCCCch-HhhcCCCcCCeEEEecccccccCC---CcEEEeCHHHHHHHHHh--c--ccceecCCCCHHHHHHHH
Confidence 743 2333222 2333432 5777 889998742 18899999988877540 0 013344455666666667
Q ss_pred HHHHHHhh-cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-
Q psy14484 320 ATLEIFNK-DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI- 397 (430)
Q Consensus 320 ~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~- 397 (430)
++|+.++. ++..++++++.+++.+.|+++ ..+. .++.|.++++.+. .+ ..+.++.+.|.++||.+.++
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~g~~~~~~~~-~~-----~~~~~l~~~l~~~gi~v~~~~ 354 (398)
T 3a2b_A 285 KALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDL---GATESPILPIFIR-SN-----EKTFWVTKMLQDDGVFVNPVV 354 (398)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCB---CSCCSSEEEEECC-CH-----HHHHHHHHHHHHTTEECEEEC
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCc---CCCCCCEEEEEcC-CH-----HHHHHHHHHHHHCCcEEEeeC
Confidence 77776543 467788888999999999876 3322 2345788777765 31 11467999999999999885
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++..++++++++++++|++++.++
T Consensus 355 ~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 355 SPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp TTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 2689999998899999999999999998753
No 48
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=7.4e-32 Score=260.80 Aligned_cols=355 Identities=13% Similarity=0.101 Sum_probs=232.3
Q ss_pred eeEEeecCCceeEEEECCCC-----EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCH-HHHHHHHHHHh
Q psy14484 15 LVIRSLKNSWKWSLIDVSGK-----RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHK-PVIKLSEKLSS 88 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~-----~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~ 88 (430)
.+-++++++ ++||.+|+ +++||..+ ...+| .+|+|.+++.+++......+... ..+ +.+++++.+.+
T Consensus 7 ~~~~~~~~~---~~~d~~~~~~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~ 79 (390)
T 1d2f_A 7 VVDRHGTWC---TQWDYVADRFGTADLLPFTIS--DMDFA-TAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFST 79 (390)
T ss_dssp --------------------------CEECCSS--SCSSC-CCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHH
T ss_pred cccccCCCc---cchhhhccccCCCCeeEeeec--CCCCC-CCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHH
Confidence 345566565 79999997 78999776 44577 78999999999886532111112 445 67777777776
Q ss_pred hcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 89 LTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 89 ~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
.++ .++++|++++|+++|++.++++++. ++++|++.+++||++.......+. ....+
T Consensus 80 ~~g~~~~~~~v~~t~g~~~al~~~~~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~v 138 (390)
T 1d2f_A 80 QHYTAIDSQTVVYGPSVIYMVSELIRQWSE--------TGEGVVIHTPAYDAFYKAIEGNQR-------------TVMPV 138 (390)
T ss_dssp HSCCCCCGGGEEEESCHHHHHHHHHHHSSC--------TTCEEEEEESCCHHHHHHHHHTTC-------------EEEEE
T ss_pred hcCCCCCHHHEEEcCCHHHHHHHHHHHhcC--------CCCEEEEcCCCcHHHHHHHHHCCC-------------EEEEe
Confidence 655 5678999999999999999998753 568899999999987654433221 12233
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc
Q psy14484 167 TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~ 246 (430)
+.+.... .+ ..|+++|++++++ .++++|++.. ++|++|.+ ++.+++++|.++|++||+++|+||+|+
T Consensus 139 ~~~~~~~-~~--------~~d~~~l~~~l~~--~~~~~v~l~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~ 205 (390)
T 1d2f_A 139 ALEKQAD-GW--------FCDMGKLEAVLAK--PECKIMLLCS-PQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHM 205 (390)
T ss_dssp ECEECSS-SE--------ECCHHHHHHHHTS--TTEEEEEEES-SCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ecccCCC-cc--------ccCHHHHHHHhcc--CCCeEEEEeC-CCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 3321100 00 0178999999963 3678887777 88888855 567889999999999999999999999
Q ss_pred CCCCccccc-ccccCCCCC---c-eeeeecccC-CCccccEEEEEc-HHHHHhhhccCCcccccc-cCCC-CCCHHHHHH
Q psy14484 247 GCGRTGKFF-ACEHAEIWP---D-FLCLSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLH-SHSY-SGNPLACCA 317 (430)
Q Consensus 247 g~g~~g~~~-~~~~~~~~~---d-~~~~sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~-~~t~-~~~~~~~~a 317 (430)
++.+.|..+ .+. .+.+ | +.++||.++ +| +|+|+++++ +++.+.+.. ... ..++ +.+++++.+
T Consensus 206 ~~~~~g~~~~~~~--~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~a 276 (390)
T 1d2f_A 206 DMVWGEQPHIPWS--NVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLS------ALKGRDGLSSPSVLALTA 276 (390)
T ss_dssp TCBCSSSCCCCGG--GTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHH------HHHTTSCCCSCCHHHHHH
T ss_pred ccccCCCCCcCHH--HcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHH------HHhhhcccCCCCHHHHHH
Confidence 887665422 121 1222 3 789999997 57 799999985 788777664 223 3455 678888888
Q ss_pred HHHHHHHHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEE-EEEEeecCCccchhHHHHHHHHHH-HCCcE
Q psy14484 318 ALATLEIFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNELL 393 (430)
Q Consensus 318 a~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~ 393 (430)
+.++++..+ -+...++++++.+++.+.|++. .|.+...++.|.++ ++.+. .... . +.++.+.|. ++||.
T Consensus 277 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~l~~~l~~~~gi~ 349 (390)
T 1d2f_A 277 HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA--FPELNWQIPQSTYLAWLDLR-PLNI-D---DNALQKALIEQEKVA 349 (390)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCCCCCSBCSEEEEECG-GGCC-C---HHHHHHHHHHTTCEE
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCEEecCCccEEEEEEcc-ccCC-C---HHHHHHHHHHHcCEE
Confidence 888886421 1234455666667777777651 23333344555444 56665 3101 1 357889998 67999
Q ss_pred Eeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 394 LRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 394 ~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.++ .+++|++++. +++++++++++|++++.+.
T Consensus 350 v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 350 IMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp CEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred eeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 9874 3689998875 5899999999999998764
No 49
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=5.2e-32 Score=263.58 Aligned_cols=335 Identities=14% Similarity=0.119 Sum_probs=243.9
Q ss_pred ceeEEEECCCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc----ccCCCCCHHHHHHHHHHHhhcCCCCCeEE
Q psy14484 24 WKWSLIDVSGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV----MLSNLTHKPVIKLSEKLSSLTQYKLGHCF 98 (430)
Q Consensus 24 ~~~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~ 98 (430)
.+.++.+.+|++|+||+++ .++|+ .+|++.+++.+++.+.... .......+...++++++++.++ .+..+
T Consensus 49 ~~~~~~~~~g~~~ld~~s~---~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~~i 123 (409)
T 3kki_A 49 KHLVLGKQASPDDIILQSN---DYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--FDECL 123 (409)
T ss_dssp SCTTCCCCCCTTSEECCCS---CTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--CSEEE
T ss_pred CeeeeCCCCCCceEEeecc---CccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--CCeEE
Confidence 3456888899999999886 55776 5899999999999874321 1112333556788888999884 45677
Q ss_pred EcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCC
Q psy14484 99 YGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGN 178 (430)
Q Consensus 99 ~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
++++|++|+..+++++.. +++.|++..++| +.........+ .....++.+
T Consensus 124 ~~~sGt~a~~~~l~~~~~--------~gd~Vl~~~~~~-~~~~~~~~~~g------------~~~~~~~~~--------- 173 (409)
T 3kki_A 124 LSQSGWNANVGLLQTICQ--------PNTNVYIDFFAH-MSLWEGARYAN------------AQAHPFMHN--------- 173 (409)
T ss_dssp EESCHHHHHHHHHHHHCC--------TTCEEEEETTSC-HHHHHHHHHTT------------CEEEEECTT---------
T ss_pred EecchHHHHHHHHHHhcC--------CCCEEEECCCcC-HHHHHHHHHcC------------CeEEEecCC---------
Confidence 889999999999997754 566777666555 44333333222 111222222
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--CCCcccccc
Q psy14484 179 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--CGRTGKFFA 256 (430)
Q Consensus 179 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g--~g~~g~~~~ 256 (430)
|+++|++++++. ++++|++++ +++++|.+.+ +++|.++|++||++||+||+|++ ++++|..+.
T Consensus 174 --------d~~~le~~l~~~--~~~~vi~~~-~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~ 238 (409)
T 3kki_A 174 --------NCDHLRMLIQRH--GPGIIVVDS-IYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGAGLL 238 (409)
T ss_dssp --------CHHHHHHHHHHH--CSCEEEEES-BCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH
T ss_pred --------CHHHHHHHHHhc--CCeEEEECC-CCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCcch
Confidence 789999999853 358999999 9999998877 99999999999999999999997 666665433
Q ss_pred cccCCC--CCce--eeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHH
Q psy14484 257 CEHAEI--WPDF--LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNIL 331 (430)
Q Consensus 257 ~~~~~~--~~d~--~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~ 331 (430)
...++ .+|+ .++||+++++ .|++++++++++.+.. ......+ +...++++++++.++++.++. ++..
T Consensus 239 -~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~aa~~aal~~~~~~~~~~ 310 (409)
T 3kki_A 239 -AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPF--ISYPAIF--SSTLLPYEAAGLETTLEIIESADNRR 310 (409)
T ss_dssp -HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHH--HCHHHHH--SBCCCHHHHHHHHHHHHHHHHCHHHH
T ss_pred -hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHH--hCcCccc--cCCCcHHHHHHHHHHHHHHhcCHHHH
Confidence 33344 4666 5789999875 4899999988776654 1111112 223578888888888987754 4677
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEE
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYL 403 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~ 403 (430)
++++++.+++.+.|+++ ... +.+.+.++++.+. .. ..+.++++.|+++||.+.+. .+++||
T Consensus 311 ~~~~~~~~~l~~~L~~~-g~~----~~~~~~~~~~~~~-~~-----~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi 379 (409)
T 3kki_A 311 QHLDRMARKLRIGLSQL-GLT----IRSESQIIGLETG-DE-----RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRL 379 (409)
T ss_dssp HHHHHHHHHHHHHHHTT-TCC----CCCSSSEEEEEEE-SH-----HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCc----cCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEE
Confidence 78889999999999876 222 2256788888776 31 11457899999999998652 268999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++..+++++|++++++|++++..
T Consensus 380 ~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 380 SLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999875
No 50
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=8.7e-32 Score=256.79 Aligned_cols=333 Identities=13% Similarity=0.061 Sum_probs=245.6
Q ss_pred eEEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 26 WSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 26 ~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
.++++.+|++++||.+| .++++ .+|++++++.+++... ..++.....++++.+++.++.+++++++++||++
T Consensus 8 ~~~~~~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~-----~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~ 79 (354)
T 3ly1_A 8 AAFTAPSTDNPIRINFN--ENPLG-MSPKAQAAARDAVVKA-----NRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSE 79 (354)
T ss_dssp -CCCCCCSSSCEECSSC--CCSSC-CCHHHHHHHHHTGGGT-----TSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHH
T ss_pred ccccCCCCCceEEccCC--CCCCC-CCHHHHHHHHHHHhhC-----cCCCCCchHHHHHHHHHHhCCChHHEEEeCChHH
Confidence 35788899999999988 46666 7899999999887642 2455667789999999999877889999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.+++.+.. +++.|++.+++|+++.......+ .+...++.+..+..
T Consensus 80 a~~~~~~~l~~--------~gd~vl~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~----------- 127 (354)
T 3ly1_A 80 GIRAAIEAYAS--------LEAQLVIPELTYGDGEHFAKIAG-------------MKVTKVKMLDNWAF----------- 127 (354)
T ss_dssp HHHHHHHHHCC--------TTCEEEEESSSCTHHHHHHHHTT-------------CEEEEECCCTTSCC-----------
T ss_pred HHHHHHHHHhC--------CCCeEEECCCCchHHHHHHHHcC-------------CEEEEecCCCCCCC-----------
Confidence 99999998754 56789999999998754433322 22344544433322
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cc---ccC-
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC---EHA- 260 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~---~~~- 260 (430)
|+++|+++++++ +++++|+++. ++|++|.. .+.+.+++|.++| ++|+++|+||+|+++.+.+... .. ...
T Consensus 128 -d~~~l~~~l~~~-~~~~~v~l~~-p~nptG~~-~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
T 3ly1_A 128 -DIEGLKAAVAAY-SGPSIVYLVN-PNNPTGTI-TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGA 202 (354)
T ss_dssp -CHHHHHHHHHTC-SSCEEEEEES-SCTTTCCC-CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTC
T ss_pred -CHHHHHHHhccC-CCCCEEEEeC-CCCCcCCC-cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcC
Confidence 889999999742 4678888888 88888855 4566677777777 7999999999999886655321 11 112
Q ss_pred CCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHH
Q psy14484 261 EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDM 338 (430)
Q Consensus 261 ~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~ 338 (430)
+....+.++||.++ .| +++|++++++++.+.+.. ....++.+++++.++.++|+..+ -+...++++++.
T Consensus 203 ~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 273 (354)
T 3ly1_A 203 ENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGR--------YVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSR 273 (354)
T ss_dssp SSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGG--------GTTCSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeeChhhccChh-hhheeeecCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 33344557899997 56 799999999999888876 22336788998888888876322 134556667777
Q ss_pred HHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe----ecCCEEEEeCCCCCCHHHH
Q psy14484 339 KKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PIGNTVYLMPPYILNKNEI 414 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~~~~lR~~~~~~~t~e~i 414 (430)
+++.+.|+++ .. ...++.|.++++.+. . . ..++.+.|.++||.+. ...+++|++++ +++++
T Consensus 274 ~~l~~~l~~~-~~---~~~~~~~~~~~~~~~-~----~---~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i 338 (354)
T 3ly1_A 274 QILLKALEDL-KL---PYLPSEGNFVFHQLV-V----P---LKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEM 338 (354)
T ss_dssp HHHHHHHHHH-TC---CBCCCCSSEEEEECS-S----C---HHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHH
T ss_pred HHHHHHHHHC-CC---eECCCCceEEEEECC-C----C---HHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHH
Confidence 7777777765 22 233567888777766 3 1 3678999999999987 12478999865 89999
Q ss_pred HHHHHHHHHHHHH
Q psy14484 415 QHMTSAIFQTFNE 427 (430)
Q Consensus 415 ~~~~~~l~~~l~~ 427 (430)
++++++|++++++
T Consensus 339 ~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 339 QWVADTMREFRKK 351 (354)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 51
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=3.1e-32 Score=263.37 Aligned_cols=354 Identities=16% Similarity=0.095 Sum_probs=247.8
Q ss_pred CceeEEeecCCceeEEEECCCCE-----EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHH
Q psy14484 13 NNLVIRSLKNSWKWSLIDVSGKR-----YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d~~g~~-----~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (430)
...+.++++++ ++||.+|++ ++||..+ . +....+|+|.+++.+++....+.+ ..+..+..+++++.++
T Consensus 9 ~~~~~~~~~g~---~~~d~~~~~~~~~~~i~l~~~--~-~~~~~~~~v~~a~~~~~~~~~~~y-~~~~~~~~~~l~~~l~ 81 (391)
T 4dq6_A 9 NEIVDRSNNFS---SKWSEMEKKYGTNDLLPMWVA--D-MDFKAAPCIIDSLKNRLEQEIYGY-TTRPDSYNESIVNWLY 81 (391)
T ss_dssp TSCCCCTTTTB---HHHHCHHHHHSCSCSEECCSS--S-CSSCCCHHHHHHHHHHHTTCCCCC-BCCCHHHHHHHHHHHH
T ss_pred ccccccccCCc---eeeeecccccCCCCceecccc--C-CCCCCCHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHHHH
Confidence 45556666665 699988644 5999876 2 333478999999999987643222 2345678889999999
Q ss_pred hhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 88 SLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 88 ~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
+.++ .+++++++++||++|++.+++++.. +++.|++.+++|+++.......+. ....
T Consensus 82 ~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~ 140 (391)
T 4dq6_A 82 RRHNWKIKSEWLIYSPGVIPAISLLINELTK--------ANDKIMIQEPVYSPFNSVVKNNNR-------------ELII 140 (391)
T ss_dssp HHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--------TTCEEEECSSCCTHHHHHHHHTTC-------------EEEE
T ss_pred HHhCCCCcHHHeEEcCChHHHHHHHHHHhCC--------CCCEEEEcCCCCHHHHHHHHHcCC-------------eEEe
Confidence 9886 5678999999999999999998854 567899999999987554433222 2233
Q ss_pred eCCC--CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEec
Q psy14484 166 ITTP--DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADE 243 (430)
Q Consensus 166 ~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DE 243 (430)
++.+ ...... .|+++|+++++ + +++++++. ++|++|. .++.+.+++|.++|++||+++|+||
T Consensus 141 ~~~~~~~~~~~~----------~d~~~l~~~l~---~-~~~v~i~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De 204 (391)
T 4dq6_A 141 SPLQKLENGNYI----------MDYEDIENKIK---D-VKLFILCN-PHNPVGR-VWTKDELKKLGDICLKHNVKIISDE 204 (391)
T ss_dssp CCCEECTTSCEE----------CCHHHHHHHCT---T-EEEEEEES-SBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred eeeeecCCCceE----------eeHHHHHHHhh---c-CCEEEEEC-CCCCCCc-CcCHHHHHHHHHHHHHcCCEEEeec
Confidence 3332 111000 17899999986 3 78888888 8888885 5667779999999999999999999
Q ss_pred cccCCCCcccc-cccccC-----CCCCceeeeecccC-CCccccEEEEEcH-HHHHhhhccCCcccccccCCCCCCHHHH
Q psy14484 244 IAVGCGRTGKF-FACEHA-----EIWPDFLCLSKGIT-GGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLAC 315 (430)
Q Consensus 244 v~~g~g~~g~~-~~~~~~-----~~~~d~~~~sK~l~-gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 315 (430)
+|+++.+.|.. ..+... +....+.++||.++ +| +|+|++++++ ++.+.+.. ...+..+++.+++++
T Consensus 205 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 278 (391)
T 4dq6_A 205 IHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDD-----AFTRIDIKRNNCFSL 278 (391)
T ss_dssp TTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHH-----HHHHTTCCCCCHHHH
T ss_pred cccccccCCCCccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHH-----HHHhhcCCCCCHHHH
Confidence 99988776642 122211 11133557899997 56 7999999885 78777664 012334567888988
Q ss_pred HHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE-EEEeecCCccchhHHHHHHHHHHHC-C
Q psy14484 316 CAALATLEIFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQIETFSKKFFVAALKN-E 391 (430)
Q Consensus 316 ~aa~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~a~~~~~~l~~~-G 391 (430)
+++.++++..+ .+...++++++.+++.+.|++. .+.+....+.+.++. +.+. .... . +..+.+.|.++ |
T Consensus 279 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~~g 351 (391)
T 4dq6_A 279 VATEASYNNGESWLESFLEYLESNIDFAIKYINEN--MPKLKVRKPEGTYLLWVDFS-ALGL-S---DEELESILVQKGK 351 (391)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSEECCCSBSSEEEEECG-GGCC-C---HHHHHHHHHHTTC
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCEecCCCccEEEEEEhh-hcCC-C---HHHHHHHHHHhCC
Confidence 88888887422 1334455666666666666542 244444455566555 5555 3111 1 36799999998 9
Q ss_pred cEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 392 LLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 392 v~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
|.+.++ .+++|++++ ++++++++++++|++++
T Consensus 352 i~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 352 VALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp EECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred EEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 999874 278999877 69999999999998876
No 52
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.3e-31 Score=260.65 Aligned_cols=347 Identities=12% Similarity=0.042 Sum_probs=237.0
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc----cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASA 106 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA 106 (430)
..++||.++. ..+| .+|++.+++.+++... ..+....+..++.+.+++.+.+.++ .+++ +|++++||++|
T Consensus 37 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a 113 (429)
T 1yiz_A 37 YKPLNLGQGF--PDYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEA 113 (429)
T ss_dssp HCCEECCSSS--CSSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred CCEEEecCCC--CCCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHH
Confidence 4689998884 4577 6899999999998752 1111112234566777777766555 4677 99999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH-H
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-R 185 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 185 (430)
++.++++++. +++.|++..++||++.......+. ....++.+..... ....... .
T Consensus 114 ~~~~~~~~~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~~~~~~~~ 169 (429)
T 1yiz_A 114 LYATIQGHVD--------EGDEVIIIEPFFDCYEPMVKAAGG-------------IPRFIPLKPNKTG---GTISSADWV 169 (429)
T ss_dssp HHHHHHHHCC--------TTCEEEEEESCCTTHHHHHHHTTC-------------EEEEEECBCCCSS---SSEEGGGCB
T ss_pred HHHHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEEeCCccccc---ccccccCcc
Confidence 9999998753 567899999999997554332211 1223333221000 0000000 0
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccc----cC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACE----HA 260 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~----~~ 260 (430)
.|+++|+++++ +++++|++++ ++|++|.+ ++++++++|.++|++||+++|+||+|+++.+.|.. ..+. ..
T Consensus 170 ~d~~~l~~~l~---~~~~~v~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 244 (429)
T 1yiz_A 170 LDNNELEALFN---EKTKMIIINT-PHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMW 244 (429)
T ss_dssp CCHHHHHHHCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTG
T ss_pred cCHHHHHHHhc---cCceEEEECC-CCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCc
Confidence 27899998884 5788888888 99999955 57889999999999999999999999988765532 1121 22
Q ss_pred CCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-----HhhcCHH---
Q psy14484 261 EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-----FNKDNIL--- 331 (430)
Q Consensus 261 ~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-----~~~~~~~--- 331 (430)
+..+++.++||.++ +| +|+|++++++++++.+.. ..+..+++.++++++++.++|+. ...+++.
T Consensus 245 ~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 317 (429)
T 1yiz_A 245 ERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQM------VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSI 317 (429)
T ss_dssp GGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHH------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHH
T ss_pred CceEEEecchhccCCCC-cceEEEEeCHHHHHHHHH------HHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHH
Confidence 33455678999998 56 799999999999887765 33456788899999888888876 3224444
Q ss_pred -HHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCcc-------chhHHHHHHHHHH-HCCcEEeec----
Q psy14484 332 -QRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQ-------IETFSKKFFVAAL-KNELLLRPI---- 397 (430)
Q Consensus 332 -~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~-------~~~~a~~~~~~l~-~~Gv~~~~~---- 397 (430)
++++++.+++.+.|+++ +. ....+ .|.++++.+. ..... ......++++.|. ++||.+.++
T Consensus 318 ~~~~~~~~~~l~~~L~~~---g~-~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~ 392 (429)
T 1yiz_A 318 SGELMAKRDYMASFLAEV---GM-NPTVPQGGYFMVADWS-SLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFY 392 (429)
T ss_dssp HHHHHHHHHHHHHHHHHH---TC-EEEECSBSSEEEEECC-SSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGS
T ss_pred HHHHHHHHHHHHHHHHhC---CC-cccCCCcceEEEEEcc-cccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhC
Confidence 44455666666666554 22 22223 4667777776 42100 0001357888886 789999864
Q ss_pred --------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 398 --------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 398 --------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+++||+++ .++++|++++++|+++++
T Consensus 393 ~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 393 SEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp CGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred CCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 468999887 499999999999988764
No 53
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=4.2e-31 Score=253.37 Aligned_cols=327 Identities=11% Similarity=0.087 Sum_probs=240.4
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC-CCCeEEEcCCchHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~sgteA~~~al 111 (430)
++.++||.++ .++++ .+|+|++++.+++..... ..++.....++++.+++.++. ..+++++++||++|++.++
T Consensus 29 ~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~---~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 102 (367)
T 3euc_A 29 SHGLVKLDAM--ENPYR-LPPALRSELAARLGEVAL---NRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLA 102 (367)
T ss_dssp CTTCEECCSS--CCCCC-CCHHHHHHHHHHHHHHHT---TCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHH
T ss_pred CCCeeEccCC--CCCCC-CCHHHHHHHHHHhhhhhh---hcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHH
Confidence 4678999988 35565 689999999998875321 133344567888999999876 6689999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+.+.. +++.|++.+++|+++.......+ .....++.+.++.. |+++|
T Consensus 103 ~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l 149 (367)
T 3euc_A 103 LAAAR--------PGAKVMAPVPGFVMYAMSAQFAG-------------LEFVGVPLRADFTL------------DRGAM 149 (367)
T ss_dssp HHTCC--------TTCEEEEEESCSCCSCHHHHTTT-------------CEEEEEECCTTSCC------------CHHHH
T ss_pred HHHcC--------CCCEEEEcCCCHHHHHHHHHHcC-------------CeEEEecCCCCCCC------------CHHHH
Confidence 98753 56789999999998755433322 22344444432222 88999
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCCCCcccccccccCCCCCceeee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY--NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 269 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~ 269 (430)
+++++++ ++++|+++. ++|++|.+ .+.+.+++|.++|++| |+++|+||+|++|...+........+...++.++
T Consensus 150 ~~~l~~~--~~~~v~~~~-~~nptG~~-~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~ 225 (367)
T 3euc_A 150 LAAMAEH--QPAIVYLAY-PNNPTGNL-FDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTV 225 (367)
T ss_dssp HHHHHHH--CCSEEEEES-SCTTTCCC-CCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEEC
T ss_pred HHHhhcc--CCCEEEEcC-CCCCCCCC-CCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecc
Confidence 9999742 567777777 88989954 5677799999999999 9999999999988644333333334444566789
Q ss_pred ecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHch
Q psy14484 270 SKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 270 sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~l 348 (430)
||...+| +++|++++++++++.+.. ...+++.+++++.++.++|+..+. +...++++++.+++.+.|+++
T Consensus 226 sK~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 296 (367)
T 3euc_A 226 SKLGLAG-IRLGYVAGDPQWLEQLDK--------VRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH 296 (367)
T ss_dssp CCTTSCS-CCEEEEEECHHHHHHHGG--------GCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhhcccc-cCceeeeeCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9993346 799999999999888876 334677899999988888864211 344556666777777777654
Q ss_pred hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+++...++.|.++++.+. + ..++.+.|.++||.+.++ .+++|++++ +++++++++++|
T Consensus 297 ---~g~~~~~~~~~~~~~~~~-~--------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l 361 (367)
T 3euc_A 297 ---GGVTVFPSAANFLLARVP-D--------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAF 361 (367)
T ss_dssp ---TTCEECCCSSSEEEEECS-C--------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHH
T ss_pred ---CCcEECCCCCeEEEEECC-C--------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHH
Confidence 444444667777776553 2 367888999999999874 368999866 999999999999
Q ss_pred HHHHH
Q psy14484 422 FQTFN 426 (430)
Q Consensus 422 ~~~l~ 426 (430)
++++.
T Consensus 362 ~~~l~ 366 (367)
T 3euc_A 362 AASLQ 366 (367)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 88763
No 54
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=4.3e-31 Score=252.60 Aligned_cols=339 Identities=14% Similarity=0.140 Sum_probs=230.7
Q ss_pred CceeEEeecCCceeEEEE-CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC
Q psy14484 13 NNLVIRSLKNSWKWSLID-VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91 (430)
Q Consensus 13 ~~~~~~~~~~~~~~~~~d-~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 91 (430)
.+.++.++.+. +.++ .+|+++|||.++ .++++ .+|++.+++.+++.... .++.+...++++.+++.++
T Consensus 7 ~~~~~~~g~~~---~~~~~~~~~~~idl~~~--~~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~l~~~la~~~~ 75 (361)
T 3ftb_A 7 GGDLMIHGGDI---YTEGVFKGRELLDYSSN--INPLG-IPKSFLNNIDEGIKNLG-----VYPDVNYRRLNKSIENYLK 75 (361)
T ss_dssp ------------------------CEETTCC--CCTTC-SCHHHHTTHHHHHHGGG-----SCCCTTCHHHHHHHHHHHT
T ss_pred CCccccCCCCH---HHHhhcCCCCEEEecCC--CCCCC-CCHHHHHHHHHHHHHhc-----CCCCccHHHHHHHHHHHhC
Confidence 34566666554 2333 489999999998 45666 58999999999887643 2334445788888888888
Q ss_pred CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC
Q psy14484 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS 171 (430)
Q Consensus 92 ~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (430)
.+++++++++||++|++.+++++ ++|++.+++|+++.......+ .....++.+..
T Consensus 76 ~~~~~i~~~~g~t~al~~~~~~~------------d~vi~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~ 130 (361)
T 3ftb_A 76 LKDIGIVLGNGASEIIELSISLF------------EKILIIVPSYAEYEINAKKHG-------------VSVVFSYLDEN 130 (361)
T ss_dssp CCSCEEEEESSHHHHHHHHHTTC------------SEEEEEESCCTHHHHHHHHTT-------------CEEEEEECCTT
T ss_pred CCcceEEEcCCHHHHHHHHHHHc------------CcEEEecCChHHHHHHHHHcC-------------CeEEEeecCcc
Confidence 78899999999999999988754 579999999998754433322 22234444322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~ 251 (430)
... ++++++++++ + +++++++. ++|++| ..++.+.+++|.++|++||+++|+||+|+++.+.
T Consensus 131 ~~~------------~~~~l~~~l~---~-~~~v~i~~-p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 192 (361)
T 3ftb_A 131 MCI------------DYEDIISKID---D-VDSVIIGN-PNNPNG-GLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD 192 (361)
T ss_dssp SCC------------CHHHHHHHTT---T-CSEEEEET-TBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC
T ss_pred cCC------------CHHHHHHhcc---C-CCEEEEeC-CCCCCC-CCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC
Confidence 122 5688888886 3 56667766 778888 4567777999999999999999999999987664
Q ss_pred ccccccccCCCCCce---eeeecccC-CCccccEEEE-EcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 252 GKFFACEHAEIWPDF---LCLSKGIT-GGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 252 g~~~~~~~~~~~~d~---~~~sK~l~-gG~~~ig~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
+........+..+++ .++||.++ +| +++|+++ .++++.+.+.. ...+++.++++++++.++|+..+
T Consensus 193 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~ 263 (361)
T 3ftb_A 193 PSSSFVGEIKNYSCLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKA--------KQNPWNINCFAEMAAINCLKDTN 263 (361)
T ss_dssp TTSSSGGGTTTCSSEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHT--------TSCTTCSCHHHHHHHHHTSSCHH
T ss_pred cccchhHhcccCCCEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHh--------hCCCCCCCHHHHHHHHHHhcCHH
Confidence 212222223333333 37899998 56 7999998 88899888876 33467889999888888876211
Q ss_pred -hcCHHHHHHHHHHHHHHHHHchhcCCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------
Q psy14484 327 -KDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------- 397 (430)
Q Consensus 327 -~~~~~~~~~~~~~~l~~~l~~l~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------- 397 (430)
-++..++++++.+++.+.|++ ++.+. ..++.|.++++.+. . . . ..++.+.|.++||.+.++
T Consensus 264 ~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~-~-~--~---~~~l~~~l~~~gi~v~~g~~~~~~~ 333 (361)
T 3ftb_A 264 YIEESLLWIKKERKRFIEELNK---IGFIKRVFSPHANFVLCRLE-N-I--S---GEKLYDSLLKEDIVIRRCCNFIGLD 333 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---SSSEEEEECCSSSEEEEEES-S-S--C---HHHHHHHHHTTTEECEECTTSTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---CCCCceecCCCCeEEEEEcC-C-C--C---HHHHHHHHHHCCeEEeeCccCCCCC
Confidence 123445555566666666654 45555 56778888888776 4 1 1 367999999999999874
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++|++++ ++++++++++.|+++.+.
T Consensus 334 ~~~iRis~~---~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 334 DSFVRFAIK---DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp TTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 368999876 888999999998887653
No 55
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.8e-30 Score=250.50 Aligned_cols=344 Identities=14% Similarity=0.121 Sum_probs=247.1
Q ss_pred CCCceeEEeecCCceeEEEECCCCEEEecccccccccCC-CCCHHHHHHHHHHHhhcccc-c---cCCCCCHHHHHHHHH
Q psy14484 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEHV-M---LSNLTHKPVIKLSEK 85 (430)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~-~---~~~~~~~~~~~l~~~ 85 (430)
...+.++.+++|. +++ .+|++|+||.++. ++| +.+|++.+++.+++...... . ......+...++++.
T Consensus 20 ~~~~~~~~~~~g~---~~~-~~g~~~id~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~ 92 (384)
T 1bs0_A 20 LRRRYPVAQGAGR---WLV-ADDRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEE 92 (384)
T ss_dssp CCCCCCCSBCSSS---EEE-ETTEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHH
T ss_pred ccccccccCCCCc---eEE-ECCceEEEeeccC---ccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHH
Confidence 3466777788777 688 7999999999872 378 58999999999998764321 1 111345788899999
Q ss_pred HHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 86 l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
+++.++. ++.+++++|++|+..+++++.. +++.|++.++ +|+.........+ .....
T Consensus 93 la~~~g~--~~~i~~~sGt~a~~~~~~~~~~--------~gd~v~~~~~-~~~~~~~~~~~~g------------~~~~~ 149 (384)
T 1bs0_A 93 LAEWLGY--SRALLFISGFAANQAVIAAMMA--------KEDRIAADRL-SHASLLEAASLSP------------SQLRR 149 (384)
T ss_dssp HHHHHTC--SEEEEESCHHHHHHHHHHHHCC--------TTCEEEEETT-CCHHHHHHHHTSS------------SEEEE
T ss_pred HHHHhCC--CcEEEeCCcHHHHHHHHHHhCC--------CCcEEEEccc-ccHHHHHHHHHcC------------CCEEE
Confidence 9999954 4777888889999999987643 4456655554 4555444333322 12233
Q ss_pred eCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccc
Q psy14484 166 ITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~ 245 (430)
++.. |+++|++++++..++++++++++ ++|++|.+.+ +++|.++|++||+++|+||+|
T Consensus 150 ~~~~-----------------d~~~l~~~l~~~~~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~De~~ 207 (384)
T 1bs0_A 150 FAHN-----------------DVTHLARLLASPCPGQQMVVTEG-VFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAH 207 (384)
T ss_dssp ECTT-----------------CHHHHHHHHHSCCSSCEEEEEES-BCTTTCCBCC----HHHHHHHHHHTTCEEEEECTT
T ss_pred eCCC-----------------CHHHHHHHHHhcCCCCeEEEEeC-CCCCCCCccC----HHHHHHHHHHcCcEEEEECCc
Confidence 3322 78899999986533478999999 9999998887 999999999999999999999
Q ss_pred c-CC-CCcccccccccCCCCCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHH
Q psy14484 246 V-GC-GRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 246 ~-g~-g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 321 (430)
+ ++ +++|..+. +.++..+|++ ++||.++. +.|++++++++++.+... .. .+..+.+.++++++++.++
T Consensus 208 ~~~~~~~~~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~--~~--~~~~~~~~~~~~~~~~~~a 279 (384)
T 1bs0_A 208 GTGVIGEQGRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQF--AR--HLIYSTSMPPAQAQALRAS 279 (384)
T ss_dssp TTTTSSGGGCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHHH--CH--HHHSSBCCCHHHHHHHHHH
T ss_pred ccceecCCCCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHHh--ch--hhhcCCCCCHHHHHHHHHH
Confidence 6 32 33343222 3445568888 89999873 448999999988877641 01 1223446788988888888
Q ss_pred HHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC
Q psy14484 322 LEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG 398 (430)
Q Consensus 322 l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~ 398 (430)
|+.+++ ++..++++++.+++.+.|+++ . +....+.|.++++.+. .. ..+.++.+.|.++||.+.++.
T Consensus 280 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g---~~~~~~~~~~~~~~~~-~~-----~~~~~l~~~l~~~gi~v~~~~ 349 (384)
T 1bs0_A 280 LAVIRSDEGDARREKLAALITRFRAGVQDL-P---FTLADSCSAIQPLIVG-DN-----SRALQLAEKLRQQGCWVTAIR 349 (384)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-S---CEECSCCSSBCCEEEE-SH-----HHHHHHHHHHHHTTEECCEEC
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHhc-C---CcccCCCCCEEEEEeC-CH-----HHHHHHHHHHHHCCcEEEeec
Confidence 887652 456777888888888888765 2 1112356777777765 31 114679999999999998752
Q ss_pred --------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 399 --------NTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 399 --------~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
+++|++++..++++++++++++|+++
T Consensus 350 ~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 350 PPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp TTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 58999999889999999999999764
No 56
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4.4e-31 Score=256.80 Aligned_cols=344 Identities=16% Similarity=0.082 Sum_probs=242.9
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc---cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH---VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA 106 (430)
.|++++||.++... ..|+.+|++.+++.+++..... +.......++.+.+++.+.+.++ .++++|++++||++|
T Consensus 32 ~g~~~idl~~g~~~-~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a 110 (407)
T 2zc0_A 32 KGVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGA 110 (407)
T ss_dssp SSCCCEECCSCCCC-TTTSCHHHHHHHHHHHHHHCGGGGSCCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHH
T ss_pred CCCceEeCCCCCCC-chhCCHHHHHHHHHHHHhhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHH
Confidence 47789999988643 4578899999999999876421 11111233555666666655445 457899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
++.++++++. +++.|++.+++||++...... .+ .....++.+.. . .
T Consensus 111 ~~~~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~-~g------------~~~~~v~~~~~--~-----------~ 156 (407)
T 2zc0_A 111 LDLLGRVLID--------PGDVVITENPSYINTLLAFEQ-LG------------AKIEGVPVDND--G-----------M 156 (407)
T ss_dssp HHHHHHHHCC--------TTCEEEEEESCCHHHHHHHHT-TT------------CEEEEEEEETT--E-----------E
T ss_pred HHHHHHHhcC--------CCCEEEEeCCChHHHHHHHHH-cC------------CEEEEcccCCC--C-----------C
Confidence 9999998853 567899999999987543322 11 12223332211 1 1
Q ss_pred HHHHHHHHHH----hCCCCeEEEE-EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccC
Q psy14484 187 AIFDLEILLK----KNHNKIAAII-IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHA 260 (430)
Q Consensus 187 d~~~le~~l~----~~~~~~~~vi-~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~ 260 (430)
|+++|+++++ +. .++++|+ ++. ++|++|. ..+.+++++|.++|++||+++|+||+|+++.+.|.. ..+..+
T Consensus 157 d~~~l~~~l~~~~~~~-~~~~~v~~~~~-~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 233 (407)
T 2zc0_A 157 RVDLLEEKIKELKAKG-QKVKLIYTIPT-GQNPMGV-TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKAL 233 (407)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECCS-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGG
T ss_pred CHHHHHHHHHhhhccc-CCceEEEECCC-CCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhc
Confidence 7899999887 32 3677775 555 8888885 567888999999999999999999999988665542 222222
Q ss_pred ---CCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--h---hcCHHH
Q psy14484 261 ---EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF--N---KDNILQ 332 (430)
Q Consensus 261 ---~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~--~---~~~~~~ 332 (430)
+...++.++||.+++| +|+|++++++++++.+.. .....+++.+++++.++.++|+.. + -+...+
T Consensus 234 ~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (407)
T 2zc0_A 234 DNEGRVIVAGTLSKVLGTG-FRIGWIIAEGEILKKVLM------QKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALL 306 (407)
T ss_dssp CSSCCEEEEEESTTTTCTT-SCCEEEECCHHHHHHHHH------HHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHH
T ss_pred CCCCCEEEEcccccccCCC-cceEEEecCHHHHHHHHH------HHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 2223566899999977 799999999998887765 234456677888888888888642 2 245667
Q ss_pred HHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec---------CCEE
Q psy14484 333 RISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI---------GNTV 401 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~---------~~~l 401 (430)
+++++.+++.+.|++. ...... .+..|.++++.+. .+. . +.++.+.|.++ ||.+.++ .+++
T Consensus 307 ~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~-~~~---~--~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~i 378 (407)
T 2zc0_A 307 GYKEKRDIMLKALENHLPNAEFT--KPIAGMFVMFFLP-EGA---D--GISFANELMEREGVVVVPGKPFYTDESGKNAI 378 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCBC--CCSBSSEEEEECS-TTC---C--HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEE
T ss_pred HHHHHHHHHHHHHHHhCCCCEEe--cCCCcEEEEEEcC-CCC---C--HHHHHHHHHHhCCeEEECchhccCCCCCCCeE
Confidence 7778888888888763 222211 2344667777775 321 1 35789999888 9999873 3689
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
|++++.. +++++++++++|++++++++
T Consensus 379 Ris~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 379 RLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp EEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 9998876 89999999999999998775
No 57
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3.9e-31 Score=260.11 Aligned_cols=344 Identities=15% Similarity=0.094 Sum_probs=239.8
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc----ccccCCCCCHHHHHHHHHHHhhcCC-CCCeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE----HVMLSNLTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~sgteA~ 107 (430)
+..+|||.+|.... .++.+|++.+++.+++.... .+....+..++.+.+++.+.+..+. ++++|++|+|+++|+
T Consensus 75 ~~~~i~l~~g~p~~-~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al 153 (448)
T 3aow_A 75 TSDIISLAGGLPNP-KTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQAL 153 (448)
T ss_dssp TSSSEECCCCCCCG-GGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHH
T ss_pred CCCcEeCCCCCCCc-hhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHH
Confidence 34689999886543 35788999999999887632 1111123345556666666555565 678999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.++++++. +++.|++.+++|+++.......+ .....++.+.. . .|
T Consensus 154 ~~~~~~l~~--------~Gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~--g-----------~d 199 (448)
T 3aow_A 154 DLIGRVFLN--------PGDIVVVEAPTYLAALQAFNFYE-------------PQYIQIPLDDE--G-----------MK 199 (448)
T ss_dssp HHHHHHHCC--------TTCEEEEEESCCHHHHHHHHTTC-------------CEEEEEEEETT--E-----------EC
T ss_pred HHHHHHHcC--------CCCEEEEeCCChHHHHHHHHHcC-------------CEEEEeccCCC--C-----------CC
Confidence 999998854 56889999999998754433221 12233332211 1 17
Q ss_pred HHHHHHHHH----hCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----ccccc
Q psy14484 188 IFDLEILLK----KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF----FACEH 259 (430)
Q Consensus 188 ~~~le~~l~----~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~----~~~~~ 259 (430)
+++|+++++ +. .++++|++.|.++|++|. ..+.+.+++|.++|++||+++|+||+|+++.+.|.. ..++.
T Consensus 200 ~~~L~~~l~~~~~~~-~~~k~v~~~~~~~NPtG~-~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~ 277 (448)
T 3aow_A 200 VEILEEKLKELKSQG-KKVKVVYTVPTFQNPAGV-TMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDN 277 (448)
T ss_dssp HHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCT
T ss_pred HHHHHHHHhhhhccC-CCCeEEEECCCCCCCcCC-CCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCC
Confidence 899999886 31 368887655537888885 477889999999999999999999999987665542 12222
Q ss_pred CCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh----hcCHHHHHH
Q psy14484 260 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN----KDNILQRIS 335 (430)
Q Consensus 260 ~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~----~~~~~~~~~ 335 (430)
.+..+++.+|||.++.| +|+|++++++++++.+.. .....+++.+++++.++.++|+... -+...+.++
T Consensus 278 ~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~------~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~ 350 (448)
T 3aow_A 278 EGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEI------AKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYK 350 (448)
T ss_dssp TSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHH------HHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23345677899999977 799999999999887765 2234466778888888888876321 122344455
Q ss_pred HHHHHHHHHHHchhcCC-CeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------CCEEEEe
Q psy14484 336 QDMKKITKALTSLITHP-KIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------GNTVYLM 404 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------~~~lR~~ 404 (430)
++.+++.+.|++. .| .+.... ..|+++++.+. .+.. +.++++.|.++||.+.|+ .+++|++
T Consensus 351 ~~~~~l~~~L~~~--~~~g~~~~~p~~g~~~~v~~~-~~~~-----~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls 422 (448)
T 3aow_A 351 PRRDAMLEALEEF--MPEGVKWTKPEGGMFIWVTLP-DGID-----SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLN 422 (448)
T ss_dssp HHHHHHHHHHHHH--CCTTCEECCCSBSSEEEEECS-TTCC-----HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEE
T ss_pred HHHHHHHHHHHHh--CCCCeEEeCCCccEEEEEEcC-CCCC-----HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEE
Confidence 6666666666542 23 233333 34677777775 4211 357899999999999874 3689999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++. .++++|++++++|++++++.+
T Consensus 423 ~~~-~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 423 FTY-VDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp CSS-SCTHHHHHHHHHHHHHHHHHH
T ss_pred eCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 886 489999999999999998764
No 58
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2.2e-31 Score=258.24 Aligned_cols=356 Identities=13% Similarity=0.038 Sum_probs=242.3
Q ss_pred eeEEeecCCceeEEEECCCC-------EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHH
Q psy14484 15 LVIRSLKNSWKWSLIDVSGK-------RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~-------~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (430)
.+.++++|+ ++||.+|+ +++||.++ ...++ .+|++.+++.+++......+.. ...++.+.+++.+.
T Consensus 8 ~~~~~~~g~---~~~d~~g~~~g~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~~y~~-~~~~l~~~la~~l~ 80 (399)
T 1c7n_A 8 KISRKNLGS---LKWDLMYSQNPEVGNEVVPLSVA--DMEFK-NPPELIEGLKKYLDETVLGYTG-PTEEYKKTVKKWMK 80 (399)
T ss_dssp CCCCTTTTB---HHHHHHHHHCTTCCTTCCCCCSS--SCSSC-CCHHHHHHHHHHHHHCCCSSBC-CCHHHHHHHHHHHH
T ss_pred cccccCCCc---cccccchhhccccCCCceeeeec--CCCCC-CCHHHHHHHHHHHhcCCCCCCC-CcHHHHHHHHHHHH
Confidence 455566666 79998873 78999776 34455 6899999999988653211111 13455566666666
Q ss_pred hhcC--CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeE
Q psy14484 88 SLTQ--YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYI 165 (430)
Q Consensus 88 ~~~~--~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
+.++ .++++|++++||++|++.+++++.. +++.|++..++||++.......+. ....
T Consensus 81 ~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~ 139 (399)
T 1c7n_A 81 DRHQWDIQTDWIINTAGVVPAVFNAVREFTK--------PGDGVIIITPVYYPFFMAIKNQER-------------KIIE 139 (399)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--------TTCEEEECSSCCTHHHHHHHTTTC-------------EEEE
T ss_pred HHhCCCCChhhEEEcCCHHHHHHHHHHHhcC--------CCCEEEEcCCCcHhHHHHHHHcCC-------------EEEe
Confidence 5555 5678999999999999999998753 567899999999997654433221 1222
Q ss_pred eCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 166 ITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 166 ~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
++.+ ..... ..|+++|++++++ .++++|++.. ++|++|. .++++++++|.++|++||+++|+||+
T Consensus 140 ~~~~~~~g~~----------~~d~~~l~~~l~~--~~~~~v~~~~-~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~ 205 (399)
T 1c7n_A 140 CELLEKDGYY----------TIDFQKLEKLSKD--KNNKALLFCS-PHNPVGR-VWKKDELQKIKDIVLKSDLMLWSDEI 205 (399)
T ss_dssp CCCEEETTEE----------ECCHHHHHHHHTC--TTEEEEEEES-SBTTTTB-CCCHHHHHHHHHHHHHSSCEEEEECT
T ss_pred cccccCCCCE----------EEcHHHHHHHhcc--CCCcEEEEcC-CCCCCCc-CcCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 3221 10000 0178999999963 4678888877 8888885 56788999999999999999999999
Q ss_pred ccCCCCcccc-cccccC-----CCCCceeeeecccC-CCccccEEEEEc-HHHHHhhhccCCcccccccCCC-CCCHHHH
Q psy14484 245 AVGCGRTGKF-FACEHA-----EIWPDFLCLSKGIT-GGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSY-SGNPLAC 315 (430)
Q Consensus 245 ~~g~g~~g~~-~~~~~~-----~~~~d~~~~sK~l~-gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~ 315 (430)
|+++.+.|.. ..+... +....+.++||.++ +| +|+|+++++ +++++.+.. .....++ +.+++++
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~ 278 (399)
T 1c7n_A 206 HFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTK------SRDATSGMPFTTLGY 278 (399)
T ss_dssp TTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHH------HHHHTTCCCCCHHHH
T ss_pred ccccccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHH------HHhhcccCCCCHHHH
Confidence 9988766532 222221 22234557899998 56 799999997 568877764 2223333 5688888
Q ss_pred HHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEE-EEEEeecCCccchhHHHHHHHHHH-HCC
Q psy14484 316 CAALATLEIFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIW-AFDVIIEDPEQIETFSKKFFVAAL-KNE 391 (430)
Q Consensus 316 ~aa~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~a~~~~~~l~-~~G 391 (430)
.++.++|+... -+...++++++.+++.+.|++. .+.+...++.|.++ ++.+. .... . ..++.+.|+ ++|
T Consensus 279 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~~g 351 (399)
T 1c7n_A 279 KACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN--HPEIKAPLIEGTYLQWIDFR-ALKM-D---HKAMEEFMIHKAQ 351 (399)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSBCCCCSBSSEEEEECG-GGCC-C---HHHHHHHHHHTTC
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhh--CCCCeEecCCceEEEEEEcc-cCCC-C---HHHHHHHHHHhCC
Confidence 88888876421 1234445566666676666651 23333344555555 46665 3111 1 357889997 689
Q ss_pred cEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 392 LLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 392 v~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|.+.++ .+++|++++. +++++++++++|+++++++
T Consensus 352 i~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 393 (399)
T 1c7n_A 352 IFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKDL 393 (399)
T ss_dssp CCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHHH
Confidence 999874 3689998875 4889999999999998865
No 59
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.98 E-value=1.6e-31 Score=259.17 Aligned_cols=342 Identities=11% Similarity=0.044 Sum_probs=236.1
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
+++++||.++... ..||.+|++.+++.+++.........+.......++++.+++.++.++++|++++|+++|++.+++
T Consensus 31 ~~~~i~l~~g~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~ 109 (397)
T 2zyj_A 31 RPGILSFAGGLPA-PELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGK 109 (397)
T ss_dssp STTCEEESSCCCC-GGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHH
T ss_pred CCCceecCCCCCC-chhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHH
Confidence 5578999888653 457889999999999887532111111122234567777777776667899999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++.. ++++|++..++||++.......+. ....++.+.. . .|+++|+
T Consensus 110 ~~~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~-----------~d~~~l~ 155 (397)
T 2zyj_A 110 VFLD--------EGSPVLLEAPSYMGAIQAFRLQGP-------------RFLTVPAGEE--G-----------PDLDALE 155 (397)
T ss_dssp HHCC--------TTCEEEEEESCCHHHHHHHHTTCC-------------EEEEEEEETT--E-----------ECHHHHH
T ss_pred HhCC--------CCCEEEEeCCCcHHHHHHHHHcCC-------------EEEecCcCCC--C-----------CCHHHHH
Confidence 8753 567899999999987544333211 2223332211 1 1789999
Q ss_pred HHHHhCCCCeEEEE-EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccCC------CCC
Q psy14484 193 ILLKKNHNKIAAII-IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHAE------IWP 264 (430)
Q Consensus 193 ~~l~~~~~~~~~vi-~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~~------~~~ 264 (430)
+++++ .++++|+ +.. ++|++|. .++.+++++|.++|++||+++|+||+|+++.+.|.. ..+..++ ...
T Consensus 156 ~~l~~--~~~~~v~~~~~-~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i 231 (397)
T 2zyj_A 156 EVLKR--ERPRFLYLIPS-FQNPTGG-LTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVI 231 (397)
T ss_dssp HHHHH--CCCSCEEECCB-SCTTTCC-BCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEE
T ss_pred HHHhh--cCCeEEEECCC-CcCCCCC-cCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEE
Confidence 99975 2456664 455 7888885 467889999999999999999999999988765542 2222222 223
Q ss_pred ceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHH
Q psy14484 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKI 341 (430)
Q Consensus 265 d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l 341 (430)
.+.++||.+++| +|+|++++++++++.+.. .....+++.+++++.++.++|+... -+...++++++.+++
T Consensus 232 ~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 304 (397)
T 2zyj_A 232 YLGSFSKVLSPG-LRVAFAVAHPEALQKLVQ------AKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAM 304 (397)
T ss_dssp EEEESTTTTCGG-GCCEEEECCHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccccc-ceeEEEecCHHHHHHHHH------HHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 355799999977 799999999998887764 2234456678888888877775321 122344455566666
Q ss_pred HHHHHchhcCC-CeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------CCEEEEeCCCCCC
Q psy14484 342 TKALTSLITHP-KIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------GNTVYLMPPYILN 410 (430)
Q Consensus 342 ~~~l~~l~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------~~~lR~~~~~~~t 410 (430)
.+.|++. .+ ++... +..|.++++.+. .+.. +.++++.|.++||.+.++ .+++|++++.. +
T Consensus 305 ~~~L~~~--~~~g~~~~~~~~g~~~~~~~~-~~~~-----~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~ 375 (397)
T 2zyj_A 305 LHALDRE--VPKEVRYTRPKGGMFVWMELP-KGLS-----AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-D 375 (397)
T ss_dssp HHHHHHH--SCTTSEECCCSBSSEEEEECS-TTCC-----HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-C
T ss_pred HHHHHHH--CCCCeEEccCCccEEEEEEcC-CCCC-----HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-C
Confidence 6666542 23 23222 345677777775 4211 367999999999999873 36899998864 8
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy14484 411 KNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 411 ~e~i~~~~~~l~~~l~~~~ 429 (430)
++++++++++|++++++++
T Consensus 376 ~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 376 REGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 60
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.98 E-value=1.1e-30 Score=249.95 Aligned_cols=321 Identities=9% Similarity=0.040 Sum_probs=231.0
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
+++++||.+| .++++ .+|++++++.+++.... .++.....++++.+++.++.+++++++++||++|++.+++
T Consensus 31 ~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 31 LTKITKLSSN--ENPLG-TSKKVAAIQANSSVETE-----IYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp CSCCEECSSC--SCTTC-CCHHHHHHHHTCBSCCC-----BC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred CCceEEccCC--CCCCC-CCHHHHHHHHHHHHHhh-----cCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHH
Confidence 4689999988 55676 68999999988654322 3444556788899999988778899999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++.. +++.|++.+++|+++.......+ .....++.+..+.. |+++++
T Consensus 103 ~~~~--------~gd~vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l~ 149 (363)
T 3ffh_A 103 VLLD--------TTTNTVMATPTFVQYRQNALIEG-------------AEVREIPLLQDGEH------------DLEGML 149 (363)
T ss_dssp HHCS--------TTCEEEEEESSCHHHHHHHHHHT-------------CEEEEEECCTTSCC------------CHHHHH
T ss_pred HHcc--------CCCEEEEcCCChHHHHHHHHHcC-------------CEEEEecCCCCCCc------------CHHHHH
Confidence 8753 56789999999987644333221 23344554432222 889999
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCc----ee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPD----FL 267 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d----~~ 267 (430)
++++ +++++|+++. ++|++|.+. +.+.+.+|.+.|++ |+++|+||+|+++.+ +.... ....+ .+| +.
T Consensus 150 ~~i~---~~~~~v~~~~-p~nptG~~~-~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~-~~~~~i~~~ 221 (363)
T 3ffh_A 150 NAID---EKTTIVWICN-PNNPTGNYI-ELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVR-TYKNLIITR 221 (363)
T ss_dssp HHCC---TTEEEEEEES-SCTTTCCCC-CHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGG-TCTTEEEEE
T ss_pred Hhcc---cCCCEEEEeC-CCCCcCCCc-CHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhh-cCCCEEEEe
Confidence 9885 5688888888 899999655 55556666666665 999999999998766 54322 22222 233 55
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKAL 345 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l 345 (430)
++||.++ +| +|+|++++++++.+.+.. ...+++.++++++++.++|+..+ -++..++++++.+++.+.|
T Consensus 222 s~sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 222 TFSKIYGLAS-ARVGYGIADKEIIRQLNI--------VRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp ESSSTTCCSS-CCCEEEEECHHHHHHHHH--------TCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhhcCch-hceeeeecCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999998 56 799999999999988876 23477889999998888886321 1334455666666676666
Q ss_pred HchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
++. +.+...++.|.++++.+. . . ..++.+.|.++||.+.++ ++++|++++ +++++++++++
T Consensus 293 ~~~---~g~~~~~~~~~~~~~~~~-~----~---~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~ 358 (363)
T 3ffh_A 293 KRF---EKVKLYPANGNFVLIDLG-I----E---AGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIAL 358 (363)
T ss_dssp HHC---TTCEECCCCSSEEEEECS-S----C---HHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHH
T ss_pred hhC---CCceECCCCCeEEEEECC-C----C---HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHH
Confidence 652 333344667888777765 3 1 367999999999999885 379999876 99999999999
Q ss_pred HHHHH
Q psy14484 421 IFQTF 425 (430)
Q Consensus 421 l~~~l 425 (430)
|++++
T Consensus 359 l~~~l 363 (363)
T 3ffh_A 359 LEKLL 363 (363)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 98753
No 61
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.98 E-value=4.2e-31 Score=254.22 Aligned_cols=331 Identities=11% Similarity=0.044 Sum_probs=229.3
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCC-HHHHHHHHHHHhhc----CCC--CC-eEEEcCC
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH-KPVIKLSEKLSSLT----QYK--LG-HCFYGSD 102 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~----~~~--~~-~v~~~~s 102 (430)
.+|++++||.++. ..+| .+|++.+++.+++.... ...+.. ....++++.+++.+ +.. ++ +|++++|
T Consensus 22 ~~g~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g 95 (376)
T 2dou_A 22 ERGVGLIDLSIGS--TDLP-PPEAPLKALAEALNDPT---TYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG 95 (376)
T ss_dssp HTTCCCEECSSCC--CCCC-CCHHHHHHHHHHTTCGG---GSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred ccCCCEEeccCCC--CCCC-CCHHHHHHHHHHHhCCC---cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 3688999999884 4677 58999999999875421 113333 34456666666554 643 45 8999999
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhH
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 182 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (430)
+++|++.+++++.. ++++|++.+++||++.......+. ....++.++.+..
T Consensus 96 ~~~a~~~~~~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~-------- 146 (376)
T 2dou_A 96 SQEGLAHLLLALTE--------PEDLLLLPEVAYPSYFGAARVASL-------------RTFLIPLREDGLA-------- 146 (376)
T ss_dssp HHHHHHHHHHHHCC--------TTCEEEEESSCCHHHHHHHHHTTC-------------EEEEECBCTTSSB--------
T ss_pred cHHHHHHHHHHhcC--------CCCEEEECCCCcHhHHHHHHHcCC-------------EEEEeeCCCCCCC--------
Confidence 99999999998753 567899999999987654433221 2233333221111
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccC-
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHA- 260 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~- 260 (430)
|+++|+++++ +++++++++. ++|++|.+ ++.+++++|.++|++||+++|+||+|+++.+.|... .....
T Consensus 147 ----d~~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 217 (376)
T 2dou_A 147 ----DLKAVPEGVW---REAKVLLLNY-PNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPG 217 (376)
T ss_dssp ----CGGGSCHHHH---HHEEEEEECS-SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTT
T ss_pred ----CHHHHHHhhc---cCceEEEECC-CCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC
Confidence 6778888885 3578888877 88888854 678899999999999999999999999876555321 12222
Q ss_pred --CCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHH
Q psy14484 261 --EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRIS 335 (430)
Q Consensus 261 --~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~ 335 (430)
+....+.++||.++ +| +|+|++++++++++.+.. .....+++.++++++++.++|+..+ -+...++++
T Consensus 218 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 290 (376)
T 2dou_A 218 AKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLER------VKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYR 290 (376)
T ss_dssp GGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHH------HHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHH------HHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 22344568999997 56 799999999999887765 2334556678888888888776311 123344556
Q ss_pred HHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCC
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPY 407 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~ 407 (430)
++.+++.+.|+++ +....+ .|.++++.+. ... . +.++.+.|.++||.+.++ .+++|++++.
T Consensus 291 ~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~-~~~--~---~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~ 359 (376)
T 2dou_A 291 ERALGMAEALKGV-----LSLLPPRATMYLWGRLP-EGV--D---DLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR 359 (376)
T ss_dssp HHHHHHHHHHTTT-----SEECCCCBSSEEEEECC-TTC--C---HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS
T ss_pred HHHHHHHHHHHHh-----cCccCCCeeEEEEEECC-CCC--C---HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC
Confidence 6666666666543 222233 3556667765 321 1 357899999999999874 3689998874
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l 425 (430)
+++++++++++|++++
T Consensus 360 --~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 360 --PLEELLEAAKRIREAL 375 (376)
T ss_dssp --CHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHHHh
Confidence 8999999999998764
No 62
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.98 E-value=1.1e-30 Score=252.41 Aligned_cols=341 Identities=11% Similarity=0.078 Sum_probs=239.1
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
.+|++++||.++. ..++ .+|.+.+++.+++.... .+....+..++.+.+++.+.+.++ .+++++++++||++|+
T Consensus 27 ~~g~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~ 103 (388)
T 1j32_A 27 AEGIDVCSFSAGE--PDFN-TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI 103 (388)
T ss_dssp TTTCCCEECCCSS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred hcCCCEEECCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHH
Confidence 3688999999884 4566 58999999999886532 111112334566777777776654 3567999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 185 (430)
+.+++++.. ++++|++.+++||++....... + .....++.+. .+..
T Consensus 104 ~~~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~~-g------------~~~~~v~~~~~~~~~~----------- 151 (388)
T 1j32_A 104 FNLMLAMIE--------PGDEVIIPAPFWVSYPEMVKLA-E------------GTPVILPTTVETQFKV----------- 151 (388)
T ss_dssp HHHHHHHCC--------TTCEEEEESSCCTHHHHHHHHT-T------------CEEEEECCCGGGTTCC-----------
T ss_pred HHHHHHhcC--------CCCEEEEcCCCChhHHHHHHHc-C------------CEEEEecCCcccCCCC-----------
Confidence 999998753 5678999999999875433221 1 1223444331 1111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----ccccc--
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF----FACEH-- 259 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~----~~~~~-- 259 (430)
|+++|+++++ +++++|++++ ++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. ..+..
T Consensus 152 -d~~~l~~~l~---~~~~~v~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 225 (388)
T 1j32_A 152 -SPEQIRQAIT---PKTKLLVFNT-PSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEA 225 (388)
T ss_dssp -CHHHHHHHCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHH
T ss_pred -CHHHHHHhcC---cCceEEEEeC-CCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccc
Confidence 7899998885 4688888888 88888955 56788999999999999999999999988665532 11111
Q ss_pred CCCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHH
Q psy14484 260 AEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQ 336 (430)
Q Consensus 260 ~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~ 336 (430)
.+..+++.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+..+ .++..+++++
T Consensus 226 ~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 298 (388)
T 1j32_A 226 YERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATK------IQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAE 298 (388)
T ss_dssp HHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHH------HHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHH
T ss_pred cCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 234456778999997 46 799999999998887765 3345677888888888888776221 1234556677
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-----CCEEEEeCCCCC
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-----GNTVYLMPPYIL 409 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-----~~~lR~~~~~~~ 409 (430)
+.+++.+.|+++ +++....+.+ .++++.+. ... .. +.++++.|.+ +||.+.++ .+++|++++ +
T Consensus 299 ~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~-~~~--~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~ 368 (388)
T 1j32_A 299 RRRYMLDALNAM---PGLECPKPDGAFYMFPSIA-KTG--RS--SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--T 368 (388)
T ss_dssp HHHHHHHHHHTC---TTCBCCCCCBTTEECCBCG-GGT--CC--HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--S
T ss_pred HHHHHHHHHhhC---CCCcccCCCeeEEEEEecC-CCC--CC--HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--C
Confidence 777777777665 3322223333 34444443 201 11 3578888886 69999885 378999876 7
Q ss_pred CHHHHHHHHHHHHHHHHHhh
Q psy14484 410 NKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++++++++++|++++++++
T Consensus 369 ~~~~i~~~~~~l~~~l~~~~ 388 (388)
T 1j32_A 369 DLDTIKRGMERLEKFLHGIL 388 (388)
T ss_dssp CHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998764
No 63
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.98 E-value=5.7e-31 Score=253.25 Aligned_cols=330 Identities=12% Similarity=0.035 Sum_probs=230.2
Q ss_pred ECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCC--CCCeEEEcCCchHHH
Q psy14484 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAV 107 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgteA~ 107 (430)
+.+| +++||.++. +.++ .+|+|++++.+++.....+....+..++++++++.+.+.++. ++++|++++||++|+
T Consensus 20 ~~~g-~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al 95 (376)
T 3ezs_A 20 TPKK-RGLDLGIGE--PQFE-TPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVL 95 (376)
T ss_dssp CCSS-CCCBCSSCC--CCSC-CCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHH
T ss_pred hccC-CEEEeCCCC--CCCC-CCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHH
Confidence 3477 899999884 5666 689999999988744333322233456778888888777765 678999999999999
Q ss_pred HHHHHHHHHhhhhcCCCC--CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLN--KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~--~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
+.+++.++. + ++.|++.+++|+++.......+. ....++.+.....
T Consensus 96 ~~~~~~~~~--------~~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~----------- 143 (376)
T 3ezs_A 96 FNFPSFVLF--------DYQNPTIAYPNPFYQIYEGAAKFIKA-------------KSLLMPLTKENDF----------- 143 (376)
T ss_dssp HHHHHHHTT--------TCSSCEEEEEESCCTHHHHHHHHTTC-------------EEEEEECCGGGTS-----------
T ss_pred HHHHHHHcC--------CCCCCEEEEecCCcHhHHHHHHHcCC-------------EEEEcccCCCCCc-----------
Confidence 999998864 4 78999999999987554333221 2233433321111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-c------
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-E------ 258 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~------ 258 (430)
++ ++++.+.+ +++++++.. ++|++|. .++.+.+++|.++|++||+++|+||+|+++.+.+..... .
T Consensus 144 -~~-~l~~~~~~---~~~~v~~~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 216 (376)
T 3ezs_A 144 -TP-SLNEKELQ---EVDLVILNS-PNNPTGR-TLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAG 216 (376)
T ss_dssp -CC-CCCHHHHH---HCSEEEECS-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTT
T ss_pred -ch-hHHhhhcc---CCCEEEEcC-CCCCcCC-CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHcccccc
Confidence 12 45555542 456677666 7888884 557778999999999999999999999988776643322 1
Q ss_pred --cCCCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-cCHHHHH
Q psy14484 259 --HAEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-DNILQRI 334 (430)
Q Consensus 259 --~~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~ 334 (430)
..+....+.++||.++ .| +|+|++++++++++.+.. ..+..+++.+++++.++.++|+..+. +...+++
T Consensus 217 ~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 289 (376)
T 3ezs_A 217 NEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKA------FRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIY 289 (376)
T ss_dssp CTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH------HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHH
T ss_pred ccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHH------HHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 2344455678999996 56 899999999999888765 33456778899999888888763110 1223333
Q ss_pred HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec---------CCEEEEe
Q psy14484 335 SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI---------GNTVYLM 404 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~---------~~~lR~~ 404 (430)
+++.+++.+.|+ .+. .+..|.++++.+. + ...+++.|.+ +||.+.++ .+++|++
T Consensus 290 ~~~~~~l~~~l~------~~~-~~~~~~~~~~~~~-~--------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis 353 (376)
T 3ezs_A 290 ANNLKLARKIFK------NTL-IYPYSFYVYLPVQ-N--------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLA 353 (376)
T ss_dssp HHHHHHHHHHST------TCC-CCSBSSEEEEECS-C--------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEE
T ss_pred HHHHHHHHHHhc------CCC-CCCcceEEEEECC-C--------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEE
Confidence 444444444433 222 3455677766654 2 3678888887 89999873 3789998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++ .+++++++++++|++++++
T Consensus 354 ~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 354 LV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp CC--SCHHHHHHHHHHHHHHHCC
T ss_pred Ec--CCHHHHHHHHHHHHHHHHh
Confidence 76 3999999999999998764
No 64
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.98 E-value=2.1e-30 Score=251.03 Aligned_cols=340 Identities=12% Similarity=0.045 Sum_probs=237.9
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCC-eEEEcCC
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLG-HCFYGSD 102 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~-~v~~~~s 102 (430)
+++|.+|+++|||.+|. ..++ .+|.|++++.+++.....+....+..++++++++.+.+.++ .+++ +|++++|
T Consensus 23 ~~~~~~g~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g 99 (396)
T 3jtx_A 23 GISAPEGMEAVPLHIGE--PKHP-TPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLG 99 (396)
T ss_dssp TCCCCTTCCCEECSCCS--CCSC-CCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESS
T ss_pred hhhhccCCCeEEeCCcC--CCCC-CCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCC
Confidence 36678999999999984 4555 68999999999876544333333445777888888887766 3478 9999999
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCC----cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCC
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNK----KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGN 178 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~----~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
+++|++.++++++.. ++ +.|++..++|+++.......+. ....++.+......
T Consensus 100 ~~~al~~~~~~~~~~-------g~~~~~d~vl~~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~g~~~--- 156 (396)
T 3jtx_A 100 SREALFSFVQTVLNP-------VSDGIKPAIVSPNPFYQIYEGATLLGGG-------------EIHFANCPAPSFNP--- 156 (396)
T ss_dssp HHHHHHHHHHHHCCC----------CCCCEEEEEESCCHHHHHHHHHTTC-------------EEEEEECCTTTCCC---
T ss_pred cHHHHHHHHHHHhCC-------CCccCCCEEEEcCCCcHhHHHHHHHcCC-------------EEEEeecCCCCCcc---
Confidence 999999999988641 32 7899999999987554333222 22344432211111
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-ccccc
Q psy14484 179 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG-KFFAC 257 (430)
Q Consensus 179 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g-~~~~~ 257 (430)
|+++|++++++ ++++++++. ++|++|. ..+.+.+++|.++|++||+++|+||+|+++.+.+ .....
T Consensus 157 --------d~~~l~~~~~~---~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 223 (396)
T 3jtx_A 157 --------DWRSISEEVWK---RTKLVFVCS-PNNPSGS-VLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGC 223 (396)
T ss_dssp --------CGGGSCHHHHH---TEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCH
T ss_pred --------CHHHHHHhhcc---CcEEEEEEC-CCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchH
Confidence 67888888873 677888777 8888885 5566779999999999999999999999887766 33222
Q ss_pred -c-------cCCCCCceeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-h
Q psy14484 258 -E-------HAEIWPDFLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-K 327 (430)
Q Consensus 258 -~-------~~~~~~d~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~ 327 (430)
. ..+..+++.++||.++. | +|+|++++++++++.+.. .....+++.+++++.++.++|+..+ -
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~ 296 (396)
T 3jtx_A 224 LQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLL------YRTYHGSAMSIPVQRASIAAWDDEQHV 296 (396)
T ss_dssp HHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHH------HHHHHTCCCCHHHHHHHHHHHHCCHHH
T ss_pred HhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHH------HHhhcccCCCHHHHHHHHHHhCCHHHH
Confidence 1 13444567789998764 5 899999999999888765 3345567889999988888876211 1
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec---------
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI--------- 397 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~--------- 397 (430)
....++++++.+++.+.|+++ .+. ..+..|.++++.+. . . . ...+++.|+ ++||.+.|+
T Consensus 297 ~~~~~~~~~~~~~l~~~l~~~--~~~--~~~~~~~~~~~~~~-~-~--~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 365 (396)
T 3jtx_A 297 IDNRRLYQEKFERVIPILQQV--FDV--KLPDASFYIWLKVP-D-G--D---DLAFARNLWQKAAIQVLPGRFLARDTEQ 365 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--SCC--CCCSSSSEEEEECT-T-S--C---HHHHHHHHHHHHCEECEEGGGGCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCc--cCCCeeEEEEEECC-C-C--C---HHHHHHHHHHHCCEEEeCChHhCCcccc
Confidence 223344555555565655543 111 12233666666665 3 1 1 356888885 569999873
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 398 ----GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 398 ----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.+++||+++. +++++++++++|++++
T Consensus 366 ~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 366 GNPGEGYVRIALVA--DVATCVKAAEDIVSLY 395 (396)
T ss_dssp CCTTTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 2689998764 9999999999998764
No 65
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.98 E-value=3.3e-31 Score=257.57 Aligned_cols=354 Identities=10% Similarity=0.032 Sum_probs=237.8
Q ss_pred eeEEeecCCceeEEEECCCC---EEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhh
Q psy14484 15 LVIRSLKNSWKWSLIDVSGK---RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSL 89 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~---~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~ 89 (430)
.++...++. ++.+..++ +++||.+|... +++ .+|+|++++.+++..... +....+..+..+++++++++.
T Consensus 20 ~~~~~~~~~---~~~~~~~~~~~~~id~~~g~~~-~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~ 94 (407)
T 3nra_A 20 EVRQSAAGL---EALIRGAPIEGRPVDFSHGDVD-AHE-PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAF 94 (407)
T ss_dssp -------CC---TTTCCSCCCCSCCEETTSCCTT-TSC-CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhh---HHHhhcCCCCCceeeecCcCCC-CCC-CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 344455444 24333333 49999987432 344 689999999999876432 222344567888999999998
Q ss_pred cCCC--C-CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEe
Q psy14484 90 TQYK--L-GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYII 166 (430)
Q Consensus 90 ~~~~--~-~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (430)
++.. + +++++++||++|+..+++++.. +++.|++..++|+++......... ....+
T Consensus 95 ~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~--------~gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~~ 153 (407)
T 3nra_A 95 TGAPVDARDGLIITPGTQGALFLAVAATVA--------RGDKVAIVQPDYFANRKLVEFFEG-------------EMVPV 153 (407)
T ss_dssp HTSCCCTTTSEEEESHHHHHHHHHHHTTCC--------TTCEEEEEESCCTHHHHHHHHTTC-------------EEEEE
T ss_pred hCCCCCCCCcEEEeCCcHHHHHHHHHHhCC--------CCCEEEEcCCcccchHHHHHHcCC-------------EEEEe
Confidence 8643 3 7999999999999999987743 667899999999976544333221 22333
Q ss_pred CC------CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy14484 167 TT------PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLI 240 (430)
Q Consensus 167 ~~------~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li 240 (430)
+. ++.+.. |+++|++++++ +++++++.. ++|++| ..++.+.+++|.++|++||+++|
T Consensus 154 ~~~~~~~~~~~~~~------------d~~~l~~~l~~---~~~~v~~~~-p~nptG-~~~~~~~l~~i~~~~~~~~~~li 216 (407)
T 3nra_A 154 QLDYVSADETRAGL------------DLTGLEEAFKA---GARVFLFSN-PNNPAG-VVYSAEEIGQIAALAARYGATVI 216 (407)
T ss_dssp EBCCCSSCCSSCCB------------CHHHHHHHHHT---TCCEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ecccccccCcCCCc------------CHHHHHHHHhh---CCcEEEEcC-CCCCCC-cccCHHHHHHHHHHHHHcCCEEE
Confidence 33 122222 88999999974 566666666 778888 45678889999999999999999
Q ss_pred EeccccCCCCccccc-ccccCC-----CCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHH
Q psy14484 241 ADEIAVGCGRTGKFF-ACEHAE-----IWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 313 (430)
Q Consensus 241 ~DEv~~g~g~~g~~~-~~~~~~-----~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 313 (430)
+||+|+++.+.|..+ .+...+ ...++.++||.++ .| +|+|++++++++++.+.. .....+++.+++
T Consensus 217 ~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~ 289 (407)
T 3nra_A 217 ADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEK------LQAIVSLRAAGY 289 (407)
T ss_dssp EECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHH------HHHHHTSSSCHH
T ss_pred EEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHH------HHhhhccCCChH
Confidence 999999887665432 222222 2234568999998 56 799999999999887765 334456667787
Q ss_pred HHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHH-
Q psy14484 314 ACCAALATLEIFN--KDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALK- 389 (430)
Q Consensus 314 ~~~aa~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~- 389 (430)
+++++.++|+... -++..++++++.+++.+.|+++ +.+....+. |.++++.+. .... . +.++.+.|++
T Consensus 290 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~ 361 (407)
T 3nra_A 290 SQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGC---EGVFARTPQAGSYLFPRLP-KLAV-A---PAEFVKILRLQ 361 (407)
T ss_dssp HHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTS---TTCBCCCCSBSSEECCBCC-CBSS-C---HHHHHHHHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEEEEEeCC-CCCC-C---HHHHHHHHHHh
Confidence 7777666664110 1223445566666666666654 333333344 466665555 3111 1 3578888865
Q ss_pred CCcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 390 NELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 390 ~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||.+.++ .+++|++++. ++++|++++++|+++++++
T Consensus 362 ~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 362 AGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 59999874 3689998873 9999999999999998865
No 66
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.4e-30 Score=253.75 Aligned_cols=343 Identities=13% Similarity=0.073 Sum_probs=233.3
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCC-CeEEEcCCchH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGAS 105 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~sgte 105 (430)
.+|++++||.++. ..+| .+|.+.+++.+++..... +....+..++.+.+++.+.+.++ .++ ++|++++||++
T Consensus 34 ~~g~~~idl~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~ 110 (412)
T 2x5d_A 34 RRGEDIIDLSMGN--PDGP-TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE 110 (412)
T ss_dssp HTTCCCEECSSCC--CCSC-CCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHH
T ss_pred hcCCCEEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHH
Confidence 4788999999884 4677 789999999988765311 11112233555666666655545 356 69999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.+++++.. +++.|++.+++||++.......+ .....++.+.... + .
T Consensus 111 a~~~~~~~~~~--------~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~---------~-~ 159 (412)
T 2x5d_A 111 GLAHLMLATLD--------HGDTILVPNPSYPIHIYGAVIAG-------------AQVRSVPLVPGID---------F-F 159 (412)
T ss_dssp HHHHHHHHHCC--------TTCEEEEEESCCHHHHHHHHHHT-------------CEEEEEECSTTSC---------H-H
T ss_pred HHHHHHHHhCC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEeecCCccC---------C-C
Confidence 99999998753 56789999999998755433221 1223333322100 0 1
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-cccccc----C
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEH----A 260 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~----~ 260 (430)
.|+++|+++++ +++++|++.. ++|++|. .++.+.+++|.++|++||+++|+||+|+++.+.|. ...+.. .
T Consensus 160 ~d~~~l~~~i~---~~~~~v~l~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 234 (412)
T 2x5d_A 160 NELERAIRESI---PKPRMMILGF-PSNPTAQ-CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAK 234 (412)
T ss_dssp HHHHHHHHTEE---SCCSEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGG
T ss_pred CCHHHHHHhcc---cCceEEEECC-CCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCcc
Confidence 27888888875 3566666666 7788885 56778999999999999999999999998866553 112211 2
Q ss_pred CCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHH
Q psy14484 261 EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQD 337 (430)
Q Consensus 261 ~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~ 337 (430)
+....+.++||.++ +| +|+|++++++++++.+.. .....+++.+++++.++.++|+..+ .+...++++++
T Consensus 235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 235 DIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR------IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQR 307 (412)
T ss_dssp GTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHH------HHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHH
T ss_pred CcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHH------HHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 23334568999998 57 799999999999887765 2344567889999988888886321 13455666777
Q ss_pred HHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------CCEEEEeCCCC
Q psy14484 338 MKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYI 408 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~lR~~~~~~ 408 (430)
.+++.+.|+++ .... ..+. |.++++.+. ....... +..+++.|++ +||.+.++ .+++|++++.
T Consensus 308 ~~~l~~~L~~~-g~~~---~~~~~g~~~~~~~~-~~~~~~~--~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~- 379 (412)
T 2x5d_A 308 RDVLVKGLREA-GWMV---ENPKASMYVWAKIP-EPYAHLG--SLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE- 379 (412)
T ss_dssp HHHHHHHHHHH-TCCC---CCCSBSSEEEEECC-TTTGGGC--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-
T ss_pred HHHHHHHHHHC-CCEe---cCCCeeeEEEEEcC-CccCCCC--HHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-
Confidence 77888887765 2222 2334 556667665 3210001 3578888865 69999875 3689998885
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q psy14484 409 LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 409 ~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++++++++++|+++++++
T Consensus 380 -~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 380 -NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHHHhc
Confidence 8999999999999998763
No 67
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=1e-30 Score=255.78 Aligned_cols=345 Identities=12% Similarity=0.063 Sum_probs=240.4
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc----ccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE----HVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgte 105 (430)
+..++||.+|... ..|+.+|++.+++.+++.... .+.......++.+++++.+.+.++ .++++|++++|+++
T Consensus 42 ~~~~idl~~g~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~ 120 (425)
T 1vp4_A 42 DKDAISFGGGVPD-PETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQ 120 (425)
T ss_dssp STTCEECCCCSCC-GGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHH
T ss_pred CCCceeCCCCCCC-cccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHH
Confidence 5679999988653 458889999999999887532 111112234566666666655545 56789999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
|++.+++++.. +++.|++.+++|+++.......+. ....++.+.. .
T Consensus 121 al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--~----------- 166 (425)
T 1vp4_A 121 ALDLIGKLFLD--------DESYCVLDDPAYLGAINAFRQYLA-------------NFVVVPLEDD--G----------- 166 (425)
T ss_dssp HHHHHHHHHCC--------TTCEEEEEESCCHHHHHHHHTTTC-------------EEEEEEEETT--E-----------
T ss_pred HHHHHHHHhCC--------CCCEEEEeCCCcHHHHHHHHHcCC-------------EEEEeccCCC--C-----------
Confidence 99999998753 568899999999987544333211 2223332211 1
Q ss_pred HHHHHHHHHHHhC-----CCCeEEEE-EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccc
Q psy14484 186 CAIFDLEILLKKN-----HNKIAAII-IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACE 258 (430)
Q Consensus 186 ~d~~~le~~l~~~-----~~~~~~vi-~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~ 258 (430)
.|+++|++++++. ..++++|+ +.. ++|++|. .++.+.+++|.++|+++|+++|+||+|+++.+.|.. ..+.
T Consensus 167 ~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~-~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 244 (425)
T 1vp4_A 167 MDLNVLERKLSEFDKNGKIKQVKFIYVVSN-FHNPAGV-TTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIF 244 (425)
T ss_dssp ECHHHHHHHHHHHHHTTCGGGEEEEEEECS-SCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHH
T ss_pred CCHHHHHHHHHhhhhcccCCCceEEEECCC-CCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 1789999988741 12678874 555 7888885 467888999999999999999999999988665542 2222
Q ss_pred cC---CCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--h--hcCHH
Q psy14484 259 HA---EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF--N--KDNIL 331 (430)
Q Consensus 259 ~~---~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~--~--~~~~~ 331 (430)
.+ +....+.++||.+++| +|+|++++++++++.+.. .....+++.+++++.++.++|+.. + -+...
T Consensus 245 ~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (425)
T 1vp4_A 245 KIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQ------AKQSADLCSPAITHRLAARYLERYDLLEQLKPTI 317 (425)
T ss_dssp HHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHH
T ss_pred HhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHH------HhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 12 2222355899999966 799999999998887764 223445667889888888888752 1 13345
Q ss_pred HHHHHHHHHHHHHHHch-hcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------CCE
Q psy14484 332 QRISQDMKKITKALTSL-ITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------GNT 400 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------~~~ 400 (430)
++++++.+++.+.|++. ...+++... +..|.++++.+. .+.. +.++++.|.++||.+.++ .++
T Consensus 318 ~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~-----~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~ 391 (425)
T 1vp4_A 318 ELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLP-EGFD-----TWEMFEYAKRKKVFYVPGRVFKVYDEPSPS 391 (425)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECC-TTCC-----TTTTHHHHHHHTEECEEGGGGCTTCCCCSE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcC-CCCC-----HHHHHHHHHHCCCEEECchhhcCCCCCCCe
Confidence 56667777888887764 221133322 345677777776 4211 245888888889999874 368
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+||+++.. +++++++++++|++++.++
T Consensus 392 iRis~~~~-~~e~i~~~l~~l~~~l~~~ 418 (425)
T 1vp4_A 392 MRLSFCLP-PDEKIVEGIKRLREVVLEY 418 (425)
T ss_dssp EEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence 99998864 8999999999999998764
No 68
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=1.6e-29 Score=242.68 Aligned_cols=322 Identities=12% Similarity=0.083 Sum_probs=227.9
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHhhccccccCCCC----CHHHHHHHHHHHhh--cCCCCCeEEEcCCchHHHHHH
Q psy14484 37 LDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT----HKPVIKLSEKLSSL--TQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 37 lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~--~~~~~~~v~~~~sgteA~~~a 110 (430)
+||.++. +++| .+|++.+++.+++.+..... ..+. .+..+.+++.+.+. ++.++++|++++|+++|++.+
T Consensus 33 idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~-~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~ 108 (369)
T 3cq5_A 33 IRLNTNE--NPYP-PSEALVADLVATVDKIATEL-NRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQL 108 (369)
T ss_dssp EECSSCC--CCSC-CCHHHHHHHHHHHHHHGGGT-TSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHH
T ss_pred eeccCCC--CCCC-CCHHHHHHHHHHHHhccccc-ccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHH
Confidence 8998884 4677 78999999999987632111 1222 23334444444443 445678999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++.. +++.|++.+++||++.......+ .....++.++.+.. |+++
T Consensus 109 ~~~l~~--------~gd~Vl~~~~~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~ 155 (369)
T 3cq5_A 109 LQAFGG--------PGRTALGFQPSYSMHPILAKGTH-------------TEFIAVSRGADFRI------------DMDV 155 (369)
T ss_dssp HHHHCS--------TTCEEEEEESSCTHHHHHHHHTT-------------CEEEEEECCTTSSC------------CHHH
T ss_pred HHHhcC--------CCCEEEEcCCChHHHHHHHHHcC-------------CEEEEecCCcCCCC------------CHHH
Confidence 998753 56889999999998754433322 12234443332222 7899
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-ccCC-CCCceee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAE-IWPDFLC 268 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~~-~~~d~~~ 268 (430)
++++++++ ++++|++++ ++|++|.+.+ ++++.++|+.+++++|+||+|+++.+....... +..+ ..+.+.+
T Consensus 156 l~~~i~~~--~~~~v~~~~-~~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s 228 (369)
T 3cq5_A 156 ALEEIRAK--QPDIVFVTT-PNNPTGDVTS----LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRT 228 (369)
T ss_dssp HHHHHHHH--CCSEEEEES-SCTTTCCCCC----HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEE
T ss_pred HHHHhhcc--CCCEEEEeC-CCCCCCCCCC----HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEe
Confidence 99998742 567788888 9999997776 777778888888999999999977643222221 2233 3355668
Q ss_pred eecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 269 ~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~ 346 (430)
+||.++ +| +|+|++++++++++.+.. ...+++.+++++.++.++|+..+ -+...++++++.+++.+.|+
T Consensus 229 ~sK~~~~~G-~r~G~~~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 299 (369)
T 3cq5_A 229 MSKAFDFAG-GRLGYFVANPAFIDAVML--------VRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLE 299 (369)
T ss_dssp SSSTTSCGG-GCCEEEEECTHHHHHHHT--------TSCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred chHhcCCcc-cceEEEEeCHHHHHHHHH--------cCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 56 799999999998888775 23456788999988888887432 24566777778888888887
Q ss_pred chhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 347 SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 347 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
+. . +...++.|.++++.+. .+ +.++.+.|.++||.+.++ ++++|++++ +++++++++++|+++
T Consensus 300 ~~-g---~~~~~~~~~~~~~~~~-~~-------~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 300 EL-G---YAVVPSESNFVFFGDF-SD-------QHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAEI 364 (369)
T ss_dssp HH-T---CEEECCSSSEEEEECC-SS-------HHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred hC-C---CEECCCCCeEEEEECC-CC-------HHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHHH
Confidence 64 2 2233566778777654 21 357888999999999887 478999887 899999999999987
Q ss_pred HH
Q psy14484 425 FN 426 (430)
Q Consensus 425 l~ 426 (430)
+.
T Consensus 365 ~~ 366 (369)
T 3cq5_A 365 IK 366 (369)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 69
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.97 E-value=5.8e-30 Score=251.27 Aligned_cols=341 Identities=11% Similarity=0.076 Sum_probs=239.5
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc-cc-ccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCc
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HV-MLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDG 103 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~-~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sg 103 (430)
+.+.+|++++||.++. +.++ .+|++++++.+++.... .. ....+..++++.+++.+.+.++ ..+++|++|+||
T Consensus 38 ~~~~~g~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~ 114 (437)
T 3g0t_A 38 LEKATGTKFCRMEMGV--PGLP-APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGS 114 (437)
T ss_dssp HHHHHTCCCEECCCCS--CCSC-CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred HHHhcCCCEEeccCcC--CCCC-CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCH
Confidence 4456789999999984 4565 68999999999887532 11 1112223555666666665443 356799999999
Q ss_pred hHHHHHHHHHHH--HhhhhcCCCCCc--EEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCC
Q psy14484 104 ASAVEVALKMSF--HYWYNKGFLNKK--KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGN 178 (430)
Q Consensus 104 teA~~~al~~~~--~~~~~~g~~~~~--~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 178 (430)
++|++.+++.++ . +++ +|++.+++|+++.......+ .....++.+ +.+.
T Consensus 115 t~al~~~~~~l~~~~--------~gd~~~Vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~----- 168 (437)
T 3g0t_A 115 MQGCFVSFLVANRTH--------KNREYGTLFIDPGFNLNKLQCRILG-------------QKFESFDLFEYRGE----- 168 (437)
T ss_dssp HHHHHHHHHHHTTSC--------TTCSCCEEEEESCCHHHHHHHHHHT-------------CCCEEEEGGGGCTT-----
T ss_pred HHHHHHHHHHHhcCC--------CCCccEEEEeCCCcHhHHHHHHHcC-------------CEEEEEeecCCCCc-----
Confidence 999999999886 4 456 89999999998754433322 222344432 1111
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----
Q psy14484 179 SANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF---- 254 (430)
Q Consensus 179 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~---- 254 (430)
.|+++|+++++. .++++|++.. ++|++|. ..+.+.+++|.++|++||+++|+||+|+++.+.+..
T Consensus 169 -------~d~~~l~~~l~~--~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 237 (437)
T 3g0t_A 169 -------KLREKLESYLQT--GQFCSIIYSN-PNNPTWQ-CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPG 237 (437)
T ss_dssp -------HHHHHHHHHHTT--TCCCEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTT
T ss_pred -------cCHHHHHHHHhc--CCceEEEEeC-CCCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCccc
Confidence 289999999942 4566666665 6788884 556777999999999999999999999976544321
Q ss_pred -----ccccc-CCCCCceeeeecccC-CCccccEEEEEcHHHHH-h-----------------hhccCCcccccccCCCC
Q psy14484 255 -----FACEH-AEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYN-S-----------------IYYKNNINIFLHSHSYS 309 (430)
Q Consensus 255 -----~~~~~-~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~t~~ 309 (430)
..+.. .+....+.++||.++ .| +++|++++++++++ . +.. .....+++
T Consensus 238 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 310 (437)
T 3g0t_A 238 EPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSS------ALYALSSG 310 (437)
T ss_dssp SSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTT------HHHHHHSS
T ss_pred ccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHH------HHhhhcCC
Confidence 11111 222233557899998 57 79999999999887 6 443 33445678
Q ss_pred CCHHHHHHHHHHHHHHh-----hcCHHHHHHHHHHHHHHHHHchhcCCCeeeE-------e-ecceEEEEEEeecCCccc
Q psy14484 310 GNPLACCAALATLEIFN-----KDNILQRISQDMKKITKALTSLITHPKIINF-------R-QKGMIWAFDVIIEDPEQI 376 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-------~-~~g~~~~~~~~~~~~~~~ 376 (430)
.+++++.++.++|+..+ .++..++++++.+++.+.|+++ ++... + ..|.++++.+. ..
T Consensus 311 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 381 (437)
T 3g0t_A 311 ATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN----GFNIVYDKDGNEPLADGFYFTVGYK-GM---- 381 (437)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT----TEEESSCEETTEECCSSSEEEEEET-TC----
T ss_pred CCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCEEeccccCCCCCceeEEEEEecC-CC----
Confidence 89999999988887654 2345667777888888888765 22222 3 45666766664 21
Q ss_pred hhHHHHHHHHHHHCCcEEeecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 377 ETFSKKFFVAALKNELLLRPIG-------NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 377 ~~~a~~~~~~l~~~Gv~~~~~~-------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
. ...+.+.|.++||.+.++. +++|++++. .+++++++++++|++++++
T Consensus 382 ~--~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 382 D--SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSL-LPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp C--HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSS-SCGGGHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHhc
Confidence 1 3679999999999999863 679999984 4999999999999998764
No 70
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-30 Score=253.92 Aligned_cols=349 Identities=11% Similarity=0.075 Sum_probs=237.7
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhc--cccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL--EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
.++.++||..|. ..++ .+|.+.+++.+++... ..+....+..++.+++++.+.+.++ .++++|++|+||++|+
T Consensus 55 ~~~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al 131 (447)
T 3b46_A 55 QGRELINLGQGF--FSYS-PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI 131 (447)
T ss_dssp TTSCCEECCCCS--CSSC-CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred cCCCeEEccCCC--CCCC-CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 577899998884 3555 6899999999988752 2222222334666777777776654 3456899999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCC-CCCCCChhHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN-INKGNSANEIARC 186 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 186 (430)
+.+++++.. +++.|++.+++||++.......+. ....++...... .........+ ..
T Consensus 132 ~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~~~~~~~~~-~~ 189 (447)
T 3b46_A 132 LSCLMGLLN--------AGDEVIVFEPFFDQYIPNIELCGG-------------KVVYVPINPPKELDQRNTRGEEW-TI 189 (447)
T ss_dssp HHHHHHHCC--------TTCEEEEEESCCTTHHHHHHHTTC-------------EEEEEEEECCGGGGTSCBCSTTS-EE
T ss_pred HHHHHHHcC--------CCCEEEEeCCCchhHHHHHHHcCC-------------EEEEEeCCCccccccccccccCc-cc
Confidence 999998754 568899999999987554433222 112232211100 0000000000 02
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc---c--ccCC
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA---C--EHAE 261 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~---~--~~~~ 261 (430)
|+++|+++++ +++++|++++ ++|++|.+ ++.+.+++|.++|++||+++|+||+|+++.+.|.... + ...+
T Consensus 190 d~~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 264 (447)
T 3b46_A 190 DFEQFEKAIT---SKTKAVIINT-PHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQ 264 (447)
T ss_dssp CHHHHHTTCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHT
T ss_pred CHHHHHHhhc---cCCeEEEEeC-CCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCC
Confidence 7889988885 5788888888 89999954 6689999999999999999999999998876553111 2 1234
Q ss_pred CCCceeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcC----HHHHHH
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN----ILQRIS 335 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~----~~~~~~ 335 (430)
..+.+.++||.++ .| +|+|++++ ++++++.+.. ..+..+++.+++++.++.++|+....++ ..++++
T Consensus 265 ~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~------~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~ 337 (447)
T 3b46_A 265 LTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAK------AHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYI 337 (447)
T ss_dssp TEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHH------HHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHH------HHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHH
Confidence 5566778999998 57 79999999 9999887765 2345677888898888888887653233 445667
Q ss_pred HHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccc----------hhHHHHHHHHHH-HCCcEEeec-------
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQI----------ETFSKKFFVAAL-KNELLLRPI------- 397 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------~~~a~~~~~~l~-~~Gv~~~~~------- 397 (430)
++.+++.+.|+++ .... ..+..|.++++++. ...... .....++++.|. ++||.+.|+
T Consensus 338 ~~~~~l~~~L~~~-g~~~--~~~~~g~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~ 413 (447)
T 3b46_A 338 NKFKIFTSIFDEL-GLPY--TAPEGTYFVLVDFS-KVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKE 413 (447)
T ss_dssp HHHHHHHHHHHHH-TCCE--ECCSBSSEEEEECT-TCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGG
T ss_pred HHHHHHHHHHHHC-CCee--cCCCeeEEEEEecc-cccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCC
Confidence 7777777777765 2222 12334667777665 310000 011357888886 589999875
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 398 -----GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 398 -----~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.+++||+++ .++++|++++++|++
T Consensus 414 ~~~~~~~~iRls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 414 HEKAAENLLRFAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp GGGGGTTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred ccCCCCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 478999877 489999999999976
No 71
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.97 E-value=7.4e-30 Score=246.62 Aligned_cols=336 Identities=13% Similarity=0.083 Sum_probs=234.7
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCe-EEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGH-CFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~-v~~~~sgteA~~~ 109 (430)
..++||.++. ..++ .+|++.+++.+++..... +.......++.+.+++.+.+.++ .++++ +++++||++|++.
T Consensus 26 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~ 102 (389)
T 1gd9_A 26 KDVISLGIGE--PDFD-TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLM 102 (389)
T ss_dssp SSCEECCCCS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHH
T ss_pred cCeEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHH
Confidence 4688998874 4566 689999999998875321 11112334566677777766555 46778 9999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCA 187 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 187 (430)
+++++.. +++.|++.+++||++.......+ .....++.+. .+.. |
T Consensus 103 ~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~------------d 149 (389)
T 1gd9_A 103 GLSAFLK--------DGEEVLIPTPAFVSYAPAVILAG-------------GKPVEVPTYEEDEFRL------------N 149 (389)
T ss_dssp HHTTTCC--------TTCEEEEEESCCTTHHHHHHHHT-------------CEEEEEECCGGGTTCC------------C
T ss_pred HHHHhCC--------CCCEEEEcCCCchhHHHHHHHCC-------------CEEEEeccCCccCCCC------------C
Confidence 9987743 56889999999998754332211 1223344321 1111 7
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccC-C-CCC
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA-E-IWP 264 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~-~-~~~ 264 (430)
+++|+++++ ++++++++++ ++|++|.+ ++.+.+++|.++|++||+++|+||+|+++.+.|. ...+..+ + ...
T Consensus 150 ~~~l~~~l~---~~~~~v~~~~-~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T 1gd9_A 150 VDELKKYVT---DKTRALIINS-PCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 224 (389)
T ss_dssp HHHHHHHCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred HHHHHHhcC---cCceEEEEEC-CCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCC
Confidence 899998885 3678888887 88888854 6788899999999999999999999998866554 2222222 2 123
Q ss_pred c--eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHHHH
Q psy14484 265 D--FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK----DNILQRISQD 337 (430)
Q Consensus 265 d--~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~ 337 (430)
| +.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+.... +...++++++
T Consensus 225 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (389)
T 1gd9_A 225 TITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVK------FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRR 297 (389)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH------HHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecChhhcCCcc-cceEEEEECHHHHHHHHH------HHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Confidence 4 447899997 46 799999999999887765 23455677888888888888864322 3345566777
Q ss_pred HHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCC
Q psy14484 338 MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 338 ~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
.+++.+.|+++ ...... +..|.++++.+. .... . +.++.+.|. ++||.+.++ .+++||+++.
T Consensus 298 ~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~-~~~~--~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-- 367 (389)
T 1gd9_A 298 RKLVWKRLNEM-GLPTVK--PKGAFYIFPRIR-DTGL--T--SKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-- 367 (389)
T ss_dssp HHHHHHHHHHT-TCCCCC--CCBTTEECCBCG-GGTC--C--HHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--
T ss_pred HHHHHHHHHHc-CCeecC--CCeeeEEEEecc-CCCC--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--
Confidence 77777777765 322211 223455555554 2111 1 357889987 899999875 3689998774
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
+++++++++++|++++++
T Consensus 368 ~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 368 AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999999875
No 72
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=1.8e-30 Score=248.75 Aligned_cols=328 Identities=13% Similarity=0.152 Sum_probs=226.1
Q ss_pred ECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH
Q psy14484 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~ 109 (430)
+.+|++++||.++. +++| .+|++.+++.+++.... .++.....++++.+++.++.+++++++++|+++|++.
T Consensus 20 ~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 20 GISPDQLLDFSANI--NPLG-MPVSVKRALIDNLDCIE-----RYPDADYFHLHQALARHHQVPASWILAGNGETESIFT 91 (364)
T ss_dssp TSCGGGSEECSSCC--CTTC-CCHHHHHHHHHTGGGGG-----SCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred CCCccceEEecccc--CCCC-CCHHHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHH
Confidence 45788999998874 5677 78999999999876532 2223335678888888887777899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH-H
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA-I 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~ 188 (430)
+++++ . + ++|++..++||++.......+. ....++.+..... + +
T Consensus 92 ~~~~~-~--------g-d~vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~------------~~l 136 (364)
T 1lc5_A 92 VASGL-K--------P-RRAMIVTPGFAEYGRALAQSGC-------------EIRRWSLREADGW------------QLT 136 (364)
T ss_dssp HHHHH-C--------C-SEEEEEESCCTHHHHHHHHTTC-------------EEEEEECCGGGTT------------CCC
T ss_pred HHHHc-C--------C-CeEEEeCCCcHHHHHHHHHcCC-------------eEEEEeCCccccc------------chh
Confidence 99987 2 5 7899999999987654433221 2233333210000 1 2
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-ccc-ccCCCCCce
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FAC-EHAEIWPDF 266 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~-~~~~~~~d~ 266 (430)
+++.+.+ .++++++++.. ++|++|. ..+.+++++|.++|++||+++|+||+|+++.+.+.. ... +..+....+
T Consensus 137 ~~~~~~~---~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~ 211 (364)
T 1lc5_A 137 DAILEAL---TPDLDCLFLCT-PNNPTGL-LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVL 211 (364)
T ss_dssp TTHHHHC---CTTCCEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEE
T ss_pred HHHHHhc---cCCCCEEEEeC-CCCCCCC-CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEE
Confidence 3233333 24556666655 6777884 567899999999999999999999999987654322 111 222333345
Q ss_pred eeeecccC-CCccccEEEE-EcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHH
Q psy14484 267 LCLSKGIT-GGYLPLSLVM-TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITK 343 (430)
Q Consensus 267 ~~~sK~l~-gG~~~ig~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~ 343 (430)
.++||.++ +| +|+|+++ +++++++.+.. ...+++.+++++.++.++|+..+ -+...++++++.+++.+
T Consensus 212 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 282 (364)
T 1lc5_A 212 RSLTKFYAIPG-LRLGYLVNSDDAAMARMRR--------QQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQ 282 (364)
T ss_dssp EESTTTTTCTT-TCCEEEECCCHHHHHHHHH--------HSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred EECchhhcCCc-cceEEEEECCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 58999998 56 7999999 99999888765 23467788998888888776311 12334445556666666
Q ss_pred HHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------CCEEEEeCCCCCCHHHHHH
Q psy14484 344 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------GNTVYLMPPYILNKNEIQH 416 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~~~lR~~~~~~~t~e~i~~ 416 (430)
.|+++ +.+...++.|.++++.+. .+ ...+.+.|.++||.+.++ ++++|+++. +++++++
T Consensus 283 ~L~~~---~~~~~~~~~g~~~~~~~~-~~-------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~ 348 (364)
T 1lc5_A 283 ALCQL---PLLTVYPGRANYLLLRCE-RE-------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNER 348 (364)
T ss_dssp HHHTS---TTEEECCCSSSEEEEEES-CT-------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHH
T ss_pred HHhcC---CCCEECCCCCeEEEEECC-Cc-------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC---CHHHHHH
Confidence 66543 444444667888887776 42 135888899999999874 368999855 7899999
Q ss_pred HHHHHHHHHHHh
Q psy14484 417 MTSAIFQTFNEV 428 (430)
Q Consensus 417 ~~~~l~~~l~~~ 428 (430)
++++|+++++++
T Consensus 349 l~~~l~~~~~~~ 360 (364)
T 1lc5_A 349 LLAALRNVLTGI 360 (364)
T ss_dssp HHHHHHHHC---
T ss_pred HHHHHHHHhhcc
Confidence 999998887653
No 73
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.97 E-value=3.1e-30 Score=247.64 Aligned_cols=323 Identities=16% Similarity=0.092 Sum_probs=230.1
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~ 108 (430)
+|++++||.++. ..+|+ +|++.+++.+++..... +.......++.+.+++.+.+..+ .+++++++++||++|++
T Consensus 27 ~g~~~i~l~~~~--~~~~~-~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~ 103 (370)
T 2z61_A 27 EGKKVIHLEIGE--PDFNT-PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLF 103 (370)
T ss_dssp TTCCCEECCCCS--CSSCC-CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHH
T ss_pred cCCCEEEccCCC--CCCCC-CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHH
Confidence 478899998884 46776 79999999998865321 11112334566677777665443 46689999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
.+++++.. ++++|++.+++||++.......+ .....++ . |+
T Consensus 104 ~~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~~g-------------~~~~~v~-~-----------------d~ 144 (370)
T 2z61_A 104 FALSSIID--------DGDEVLIQNPCYPCYKNFIRFLG-------------AKPVFCD-F-----------------TV 144 (370)
T ss_dssp HHHHHHCC--------TTCEEEEESSCCTHHHHHHHHTT-------------CEEEEEC-S-----------------SH
T ss_pred HHHHHhcC--------CCCEEEEeCCCchhHHHHHHHcC-------------CEEEEeC-C-----------------CH
Confidence 99998753 56889999999998754433221 1223333 1 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC-CC-CCc-
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-EI-WPD- 265 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~-~~-~~d- 265 (430)
++|+++++ +++++|++++ ++|++|.+.+ ++ |.++|++||+++|+||+|+++.+.|....+..+ +. ..|
T Consensus 145 ~~l~~~l~---~~~~~v~~~~-p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i 215 (370)
T 2z61_A 145 ESLEEALS---DKTKAIIINS-PSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTI 215 (370)
T ss_dssp HHHHHHCC---SSEEEEEEES-SCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEE
T ss_pred HHHHHhcc---cCceEEEEcC-CCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEE
Confidence 99998885 4678888888 8889997776 55 999999999999999999987665543222222 11 223
Q ss_pred -eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-Hh--hcCHHHHHHHHHHH
Q psy14484 266 -FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-FN--KDNILQRISQDMKK 340 (430)
Q Consensus 266 -~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-~~--~~~~~~~~~~~~~~ 340 (430)
+.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+. .+ .++..++++++.++
T Consensus 216 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 288 (370)
T 2z61_A 216 LINGFSKLYAMTG-WRIGYVISNDEIIEAILK------LQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRL 288 (370)
T ss_dssp EEEESTTTTTCGG-GCCEEEECCHHHHHHHHH------HHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhccCCcc-ceEEEEEECHHHHHHHHH------HHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 447899997 56 799999999998887765 33445667888988888888764 22 13456667778888
Q ss_pred HHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCCCH
Q psy14484 341 ITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYILNK 411 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~t~ 411 (430)
+.+.|+++ .... ..+. |.++++.+. . . +.++.+.|. ++||.+.++ .+++|++++ +++
T Consensus 289 l~~~L~~~-g~~~---~~~~~~~~~~~~~~-~----~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~ 354 (370)
T 2z61_A 289 VLKYVKDF-GWEV---NNPIGAYYVFPNIG-E----D---GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSY 354 (370)
T ss_dssp HHHHHHHT-TCBC---CCCCBTTEECCBCS-S----C---HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCH
T ss_pred HHHHHHHc-CCee---cCCCcceEEEEecC-C----C---HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCH
Confidence 88888765 2222 2233 455555554 3 1 357888887 789999875 468999888 699
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTFN 426 (430)
Q Consensus 412 e~i~~~~~~l~~~l~ 426 (430)
+++++++++|+++++
T Consensus 355 ~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 355 ENIKEGLERIKEFLN 369 (370)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998874
No 74
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.97 E-value=3.5e-30 Score=250.21 Aligned_cols=336 Identities=9% Similarity=0.012 Sum_probs=232.8
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcc--ccccCCCCCHHHHHHHHHHHhhcCCC--C-CeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLSSLTQYK--L-GHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~--~-~~v~~~~sgteA 106 (430)
.|++++||.+|. ..+| .+|.+.+++.+++.... .+.......++.+.+++.+.+.++.. + ++|++++|+++|
T Consensus 45 ~g~~~idl~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a 121 (404)
T 2o1b_A 45 GPLPLINMAVGI--PDGP-TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG 121 (404)
T ss_dssp CSSCCEECCCCS--CSSC-CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred CCCCEEecCCcC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence 577899999884 4677 68999999999875421 11111233455666666666555643 3 689999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIAR 185 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 185 (430)
++.+++++.. +++.|++.+++||++.......+. ....++.+. .+..
T Consensus 122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~----------- 169 (404)
T 2o1b_A 122 LVAVPTCVIN--------PGDYVLLPDPGYTDYLAGVLLADG-------------KPVPLNLEPPHYLP----------- 169 (404)
T ss_dssp HHHHHHHHCC--------TTCEEEEEESCCSSHHHHHHHTTC-------------EEEEEECCTTTCCC-----------
T ss_pred HHHHHHHhcC--------CCCEEEEcCCCchhHHHHHHHCCC-------------EEEEeccCcccCcC-----------
Confidence 9999998753 567899999999998654433221 223333322 1111
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-cc---CC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EH---AE 261 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~---~~ 261 (430)
|+++|+++++ +++++|+++. ++|++|.+ ++.+.+++|.++|+++|+++|+||+|+++.+.|....+ .. .+
T Consensus 170 -d~~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 243 (404)
T 2o1b_A 170 -DWSKVDSQII---DKTKLIYLTY-PNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKD 243 (404)
T ss_dssp -CGGGSCHHHH---HHEEEEEECS-SCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHH
T ss_pred -CHHHHHHhhc---cCceEEEEcC-CCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCC
Confidence 6778888885 3578888877 88888854 67889999999999999999999999988655532111 11 12
Q ss_pred CCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHH
Q psy14484 262 IWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDM 338 (430)
Q Consensus 262 ~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~ 338 (430)
....+.++||.++ +| +|+|++++++++++.+.. .....+++.+++++.++.++|+..+ -+...++++++.
T Consensus 244 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 316 (404)
T 2o1b_A 244 VAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKK------YQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRR 316 (404)
T ss_dssp HEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHH------HHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecchhccCch-hheEeEecCHHHHHHHHH------HHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 2234568999997 56 799999999999887765 2344567788998888888886521 133445566677
Q ss_pred HHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEEeCCCCC
Q psy14484 339 KKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYLMPPYIL 409 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~~~~~~~ 409 (430)
+++.+.|+++ .. ....+. |.++++.+. .... +.++.+.|+ ++||.+.++ .+++|++++.
T Consensus 317 ~~l~~~L~~~-g~---~~~~~~~g~~~~~~~~-~~~~-----~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-- 384 (404)
T 2o1b_A 317 DRFEAMLAKA-DL---PFVHAKGGIYVWLETP-PGYD-----SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-- 384 (404)
T ss_dssp HHHHHHHHHT-TC---CEECCCBSSEEEEECC-TTCC-----HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--
T ss_pred HHHHHHHHhc-CC---eecCCCcceEEEEeCC-CCCC-----HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--
Confidence 7777777664 22 223343 455666665 3211 356888877 579999874 4689998885
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~ 427 (430)
+++++++++++|++++++
T Consensus 385 ~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 385 DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp CTTHHHHHHHHHHGGGGG
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 788999999999988764
No 75
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.97 E-value=4.1e-30 Score=248.67 Aligned_cols=339 Identities=14% Similarity=0.063 Sum_probs=229.5
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
.+|+++|||.+|. ..++. +|+|++++.+++...... ....+..++.+.+++.+.+.++ .++++|++|+||++|+
T Consensus 28 ~~g~~~i~l~~g~--~~~~~-~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al 104 (391)
T 3h14_A 28 EAGRRIIHMEVGQ--PGTGA-PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104 (391)
T ss_dssp HTTCCCEECCCSS--CSSCS-CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred hcCCCeEEccCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHH
Confidence 4789999999984 45553 889999999988653211 1112234566667777666544 5678999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.+++.++. +++.|++.+++|+++.......+ .....++.+...... .|
T Consensus 105 ~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------~d 153 (391)
T 3h14_A 105 LLAFTALFD--------SGDRVGIGAPGYPSYRQILRALG-------------LVPVDLPTAPENRLQ----------PV 153 (391)
T ss_dssp HHHHHHHCC--------TTCEEEEEESCCHHHHHHHHHTT-------------CEEEEEECCGGGTTS----------CC
T ss_pred HHHHHHhcC--------CCCEEEEcCCCCccHHHHHHHcC-------------CEEEEeecCcccCCC----------CC
Confidence 999998754 56889999999998754333221 222344433211000 16
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCce
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDF 266 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d~ 266 (430)
+++|++. ++++|+++. ++|++|. ..+.+.+++|.++|++||+++|+||+|+++.+.+.... .+..+....+
T Consensus 154 ~~~l~~~------~~~~v~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~ 225 (391)
T 3h14_A 154 PADFAGL------DLAGLMVAS-PANPTGT-MLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVI 225 (391)
T ss_dssp HHHHTTS------CCSEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEE
T ss_pred HHHHHhc------CCeEEEECC-CCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEE
Confidence 6776654 466677777 8888885 55677799999999999999999999998876664322 2221222334
Q ss_pred eeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHH
Q psy14484 267 LCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKA 344 (430)
Q Consensus 267 ~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~ 344 (430)
.++||.++ .| +|+|++++++++.+.+.. .....+++.+++++.++.++|+..+ -+...++++++.+++.+.
T Consensus 226 ~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 298 (391)
T 3h14_A 226 NSFSKYFSMTG-WRVGWMVVPEDQVRVVER------IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLER 298 (391)
T ss_dssp EESSSTTCCTT-SCCEEEECCGGGHHHHHH------HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhccCCcc-ceeEEEEeCHHHHHHHHH------HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 47899997 57 799999999998887765 3345677888888888878776111 133445666667777777
Q ss_pred HHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec--------CCEEEEeCCCCCCHHHH
Q psy14484 345 LTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI--------GNTVYLMPPYILNKNEI 414 (430)
Q Consensus 345 l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~--------~~~lR~~~~~~~t~e~i 414 (430)
|+++ +......+.| .++++.+. .... . +.++++.|+++ ||.+.++ .+++|++++. +++++
T Consensus 299 l~~~---~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i 368 (391)
T 3h14_A 299 LPKA---GFTRIAPPDGAFYVYADVS-DLTD-D---SRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADI 368 (391)
T ss_dssp HHHH---TCCCBCCCCBTTEEEEECT-TTCS-C---HHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHH
T ss_pred HHHc---CCCcccCCCeeEEEEEecC-ccCC-C---HHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHH
Confidence 7655 3222233444 55555554 3111 1 36788888776 9999874 3589998775 88999
Q ss_pred HHHHHHHHHHHHHh
Q psy14484 415 QHMTSAIFQTFNEV 428 (430)
Q Consensus 415 ~~~~~~l~~~l~~~ 428 (430)
++++++|++++.+.
T Consensus 369 ~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 369 EEGLDRLEAFMQAR 382 (391)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 76
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.97 E-value=8.5e-30 Score=249.29 Aligned_cols=345 Identities=12% Similarity=0.069 Sum_probs=236.5
Q ss_pred CCCCEEEecccccccc-cCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC-----CCCCeEEEcCCch
Q psy14484 31 VSGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ-----YKLGHCFYGSDGA 104 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~v~~~~sgt 104 (430)
.+|+.++||..|.... .-...+|+|++++.+++...... .+.+.....++++.+++.++ ..+++|++|+||+
T Consensus 51 ~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t 128 (427)
T 3dyd_A 51 NPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN--GYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCS 128 (427)
T ss_dssp CTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS--SCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHH
T ss_pred cCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC--CCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcH
Confidence 4578899999885321 11246899999999988763211 11222334466666666654 4678999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANE 182 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 182 (430)
+|++.+++.++. +++.|++..++|+++.......+. ++..+++.. .+..
T Consensus 129 ~al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-------- 179 (427)
T 3dyd_A 129 QAIDLCLAVLAN--------PGQNILVPRPGFSLYKTLAESMGI-------------EVKLYNLLPEKSWEI-------- 179 (427)
T ss_dssp HHHHHHHHHHCC--------TTCEEEEEESCCTHHHHHHHHTTC-------------EEEEEEEEGGGTTEE--------
T ss_pred HHHHHHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcCC-------------EEEEEecccccCCCC--------
Confidence 999999998864 568899999999987554433222 222333211 1111
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAE 261 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~ 261 (430)
|+++|++.++ .+++++++.. ++|++| ..++++.+++|.++|+++|+++|+||+|++|++.|..+ .....+
T Consensus 180 ----d~~~l~~~l~---~~~~~v~i~~-p~nptG-~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~ 250 (427)
T 3dyd_A 180 ----DLKQLEYLID---EKTACLIVNN-PSNPCG-SVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLS 250 (427)
T ss_dssp ----CHHHHHSSCC---TTEEEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGC
T ss_pred ----CHHHHHHHhc---cCCCEEEEEC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhC
Confidence 7888888875 4577777777 788888 56788889999999999999999999999998776532 344445
Q ss_pred CCCcee---eeecccCCCccccEEEEEc-------HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---c
Q psy14484 262 IWPDFL---CLSKGITGGYLPLSLVMTT-------DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---D 328 (430)
Q Consensus 262 ~~~d~~---~~sK~l~gG~~~ig~~~~~-------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~ 328 (430)
..++++ +|||.++..++|+|+++++ +++.+.+.. . ...++++++++++++.++|+.... +
T Consensus 251 ~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~------~-~~~~~~~~~~~~~a~~~~L~~~~~~~~~ 323 (427)
T 3dyd_A 251 TDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK------L-SQRILGPCTIVQGALKSILCRTPGEFYH 323 (427)
T ss_dssp SSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH------H-HHHHCCSCHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH------H-HhccCCCCHHHHHHHHHHHHhcCHHHHH
Confidence 455555 8999876533899999997 466666654 1 223577889999988888874211 3
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTV 401 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~l 401 (430)
+..++++++.+++.+.|+++ +++....+ .|+++++.+. ...........++++.|+ ++||++.++ .+++
T Consensus 324 ~~~~~~~~~~~~l~~~L~~~---~g~~~~~p~~g~~~~~~l~-~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~i 399 (427)
T 3dyd_A 324 NTLSFLKSNADLCYGALAAI---PGLRPVRPSGAMYLMVGIE-MEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFI 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHS---TTEEEECCSBTTEEEEEEC-GGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEE
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCceecCCCeeEEEEEecC-HhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeE
Confidence 34556666677777777654 55544434 4556665654 221100001356888875 789999886 3789
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|+++. +++++|++++++|++++++.
T Consensus 400 Ris~~--~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 400 RVVIT--VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp EEESC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEC--CCHHHHHHHHHHHHHHHHHh
Confidence 99865 79999999999999998764
No 77
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.97 E-value=1.6e-29 Score=245.01 Aligned_cols=333 Identities=13% Similarity=0.139 Sum_probs=234.9
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhc-----cccccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-----EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgte 105 (430)
++.++||.++ ...+ ..+|++.+++.+++... ..+....+..++++++++.+.+.++ .++++|++++||++
T Consensus 34 ~~~~i~l~~~--~~~~-~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~ 110 (398)
T 3ele_A 34 KENVYDFSIG--NPSI-PAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAA 110 (398)
T ss_dssp GGGCEECCSC--CCCS-CCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHH
T ss_pred CCCeEEeecC--CCCC-CCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHH
Confidence 4679999987 2333 37899999999998763 1122222334667778888777665 46789999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCC-cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNK-KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~-~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 183 (430)
|++.+++++.. ++ +.|++.+++|+++.......+ .....++.+.. +..
T Consensus 111 al~~~~~~l~~--------~g~d~vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~--------- 160 (398)
T 3ele_A 111 SLSICFRALTS--------DAYDEFITIAPYFPEYKVFVNAAG-------------ARLVEVPADTEHFQI--------- 160 (398)
T ss_dssp HHHHHHHHHCC--------STTCEEEEESSCCTHHHHHHHHTT-------------CEEEEECCCTTTSSC---------
T ss_pred HHHHHHHHHcC--------CCCCEEEEeCCCchhhHHHHHHcC-------------CEEEEEecCCcCCcC---------
Confidence 99999998854 45 899999999998754433322 22334444321 122
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh------cCCEEEEeccccCCCCcccccc-
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN------YNIHLIADEIAVGCGRTGKFFA- 256 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~------~gi~li~DEv~~g~g~~g~~~~- 256 (430)
|+++|+++++ +++++++++. ++|++|. ..+.+.+++|.++|++ ||+++|+||+|+++.+.|....
T Consensus 161 ---d~~~l~~~l~---~~~~~v~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~ 232 (398)
T 3ele_A 161 ---DFDALEERIN---AHTRGVIINS-PNNPSGT-VYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF 232 (398)
T ss_dssp ---CHHHHHHTCC---TTEEEEEECS-SCTTTCC-CCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC
T ss_pred ---CHHHHHHHhC---cCCCEEEEcC-CCCCCCC-CCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC
Confidence 7899998885 4688888887 8899995 5567779999999999 9999999999998876664222
Q ss_pred -cccCCCCCceeeeecccC-CCccccEEEEEcHHHHH------hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc
Q psy14484 257 -CEHAEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYN------SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328 (430)
Q Consensus 257 -~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~------~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~ 328 (430)
.+..+....+.++||.++ .| +|+|++++++++.+ .+.. ......+++.+++++.++.+.++ ..
T Consensus 233 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~l~---~~ 303 (398)
T 3ele_A 233 VTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCG-----AGRALGYVCAPSLFQKMIVKCQG---AT 303 (398)
T ss_dssp GGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHH-----HHHHTTCCCSCHHHHHHHTTCTT---CC
T ss_pred hHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHH-----HhhhccccCCCHHHHHHHHHHhc---CH
Confidence 233333344558999998 67 79999999987433 2221 01122356667777766655553 44
Q ss_pred CHHHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEE
Q psy14484 329 NILQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVY 402 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR 402 (430)
...++++++.+++.+.|+++ .. ....+.| .++++.+. .. . +..+++.|.++||.+.++ .+++|
T Consensus 304 ~~~~~~~~~~~~l~~~L~~~-g~---~~~~~~~~~~~~~~~~-~~---~---~~~~~~~l~~~gi~v~~g~~~~~~~~iR 372 (398)
T 3ele_A 304 GDINAYKENRDLLYEGLTRI-GY---HCFKPDGAFYMFVKAL-ED---D---SNAFCEKAKEEDVLIVAADGFGCPGWVR 372 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-TC---CEECCSBSSEEEEECS-SS---C---HHHHHHHHHTTTEECEESGGGTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHc-CC---eecCCCeeEEEEEEcC-CC---C---HHHHHHHHHHCCEEEeCccccCCCCeEE
Confidence 56788888999999999876 22 2233344 44666654 31 1 367888999999999885 37899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++ +++++|++++++|+++++++
T Consensus 373 is~~--~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 373 ISYC--VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp EECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEec--CCHHHHHHHHHHHHHHHHHh
Confidence 9875 79999999999999998764
No 78
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=6.6e-30 Score=247.05 Aligned_cols=333 Identities=14% Similarity=0.113 Sum_probs=233.6
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcCC--CCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQY--KLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgteA~~ 108 (430)
.|++++||.++. ..++. +|.+.+++.+++...... .......++.+.+++.+.+.++. +++++++++||++|++
T Consensus 39 ~g~~~i~l~~~~--~~~~~-~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~ 115 (389)
T 1o4s_A 39 KGEDVINLTAGE--PDFPT-PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALF 115 (389)
T ss_dssp TTCCCEECCCSS--CSSCC-CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHH
T ss_pred cCCCEEEccCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHH
Confidence 578899998884 45674 799999999988653211 11122345666677766655443 5679999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARC 186 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 186 (430)
.+++++.. +++.|++.+++|+++.......+ .....++.+. .+..
T Consensus 116 ~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~------------ 162 (389)
T 1o4s_A 116 NAFMALLD--------PGDEVIVFSPVWVSYIPQIILAG-------------GTVNVVETFMSKNFQP------------ 162 (389)
T ss_dssp HHHHHHCC--------TTCEEEEEESCCTTHHHHHHHTT-------------CEEEEEECCGGGTTCC------------
T ss_pred HHHHHhCC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEEecCCccCCCC------------
Confidence 99998743 56789999999998754433211 1223344331 1111
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccccc----CCC
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH----AEI 262 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~----~~~ 262 (430)
|+++|+++++ +++++|+++. ++|++|. .++.+.+++|.++|+++|+++|+||+|+++.+.|....... .+.
T Consensus 163 d~~~l~~~l~---~~~~~v~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~ 237 (389)
T 1o4s_A 163 SLEEVEGLLV---GKTKAVLINS-PNNPTGV-VYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDR 237 (389)
T ss_dssp CHHHHHHTCC---TTEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTT
T ss_pred CHHHHHHhcc---cCceEEEEcC-CCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCc
Confidence 7889988885 4678888888 8888885 56778999999999999999999999998766543222211 122
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI 341 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l 341 (430)
...+.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+.. .++..++++++.+++
T Consensus 238 ~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l 309 (389)
T 1o4s_A 238 IVYINGFSKSHSMTG-WRVGYLISSEKVATAVSK------IQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFV 309 (389)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHH------HHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHH
T ss_pred EEEEeechhhcCCcc-cceEEEEeCHHHHHHHHH------HhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHH
Confidence 222457899997 46 799999999998887765 234456777888888777776532 245567778888888
Q ss_pred HHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----CCEEEEeCCCCCCHHHHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----GNTVYLMPPYILNKNEIQ 415 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~ 415 (430)
.+.|+++ ...... +..|.++++.+. . . ..++.+.|+ ++||.+.++ ++++|++++ .++++++
T Consensus 310 ~~~L~~~-g~~~~~--~~~~~~~~~~~~-~----~---~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~ 376 (389)
T 1o4s_A 310 VERLKKM-GVKFVE--PEGAFYLFFKVR-G----D---DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLT 376 (389)
T ss_dssp HHHHHHT-TCCCCC--CSBSSEEEEECS-S----C---HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHH
T ss_pred HHHHHhc-CCeeec--CCcceEEEEeCC-C----C---HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHH
Confidence 8888775 333221 122445555442 1 1 357888887 889999876 368999887 4999999
Q ss_pred HHHHHHHHHHH
Q psy14484 416 HMTSAIFQTFN 426 (430)
Q Consensus 416 ~~~~~l~~~l~ 426 (430)
+++++|+++++
T Consensus 377 ~~l~~l~~~l~ 387 (389)
T 1o4s_A 377 EALDRIEDFLN 387 (389)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 79
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.97 E-value=5.8e-29 Score=243.52 Aligned_cols=341 Identities=13% Similarity=0.063 Sum_probs=231.4
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHH------------hhccccccCCCCCHHHHHHHHHHHhhcC----CCCCeE
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQL------------NKLEHVMLSNLTHKPVIKLSEKLSSLTQ----YKLGHC 97 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~v 97 (430)
+.++||.++ .+++| +|.+.+++.++. .....+..+.+..++.+.+++.+.+.++ .+++++
T Consensus 36 ~~~i~l~~~--~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i 111 (428)
T 1iay_A 36 NGVIQMGLA--ENQLC--LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERV 111 (428)
T ss_dssp TSBEECSSC--CCCSS--HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSC
T ss_pred Cceeeeccc--cchhh--HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhE
Confidence 478999876 45666 468888887532 1212222222234556666666665443 467899
Q ss_pred EEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCC
Q psy14484 98 FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNIN 175 (430)
Q Consensus 98 ~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 175 (430)
++++|++++++.++++++. +++.|++..++||++........+ .....++.+. .+..
T Consensus 112 ~~~~G~~~ai~~~~~~~~~--------~gd~Vl~~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~- 170 (428)
T 1iay_A 112 VMAGGATGANETIIFCLAD--------PGDAFLVPSPYYPAFNRDLRWRTG------------VQLIPIHCESSNNFKI- 170 (428)
T ss_dssp EEEEHHHHHHHHHHHHHCC--------TTCEEEEESSCCTTHHHHTTTTTC------------CEEEEECCCTTTTTCC-
T ss_pred EEccChHHHHHHHHHHhCC--------CCCeEEEccCCCcchHHHHHHhcC------------CEEEEeecCCccCCcC-
Confidence 9999999999999998764 567899999999987543222222 1223343321 1111
Q ss_pred CCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc
Q psy14484 176 KGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252 (430)
Q Consensus 176 ~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g 252 (430)
|+++|++++++. ..++++|++.. ++|++|. ..+.+++++|.++|++||+++|+||+|+++.+.+
T Consensus 171 -----------d~~~l~~~l~~~~~~~~~~~~v~l~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~ 237 (428)
T 1iay_A 171 -----------TSKAVKEAYENAQKSNIKVKGLILTN-PSNPLGT-TLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT 237 (428)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSS
T ss_pred -----------CHHHHHHHHHHHHhcCCceEEEEEcC-CCCCCCC-cCCHHHHHHHHHHHHHCCeEEEEeccccccccCC
Confidence 788898888752 23678777777 7788885 5688999999999999999999999999865554
Q ss_pred ccc-c---cccC----CCCCc----eeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 253 KFF-A---CEHA----EIWPD----FLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 253 ~~~-~---~~~~----~~~~d----~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
..+ . +... ++.+| +.++||.++ .| +|+|++++ ++++++.+.. ...+++.+++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~ 308 (428)
T 1iay_A 238 PQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARK--------MSSFGLVSTQTQYFL 308 (428)
T ss_dssp SCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHH--------HHTTSCCCHHHHHHH
T ss_pred CCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHH--------HHhcccCCHHHHHHH
Confidence 321 1 1111 22366 558999997 56 79999999 6788877764 233467788888888
Q ss_pred HHHHHHHh-----hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCc-cchhHHHHHHHHHHHC-
Q psy14484 319 LATLEIFN-----KDNILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPE-QIETFSKKFFVAALKN- 390 (430)
Q Consensus 319 ~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~~~a~~~~~~l~~~- 390 (430)
.++|+..+ .++..++++++.+++.+.|+++ ... ..++ .|+++++.+. .... .....+..+++.|+++
T Consensus 309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~~~~~~g~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 383 (428)
T 1iay_A 309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK---CLKNNAGLFCWMDLR-PLLRESTFDSEMSLWRVIINDV 383 (428)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC---BCCCSSSSEEEEECG-GGCSSSSHHHHHHHHHHHHHTS
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc---ccCCCeeEEEEEech-hhcCCCchhHHHHHHHHHHHhC
Confidence 87775321 1345566677777787777765 222 2233 5777777776 3210 0111235788999887
Q ss_pred CcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 391 ELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 391 Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
||.+.++ ++++|++++ .++++++++++++|++++++
T Consensus 384 gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 384 KLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp CEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence 9999885 258999988 68999999999999998864
No 80
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.97 E-value=9.7e-30 Score=245.13 Aligned_cols=323 Identities=11% Similarity=0.102 Sum_probs=231.1
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCC-HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH-KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.++||.++. ..++ .+|.+.+++.+++.... .+.. ....++++.+++.++.+++++++++||++|++.+++.
T Consensus 26 ~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~ 97 (381)
T 1v2d_A 26 GAVNLGQGF--PSNP-PPPFLLEAVRRALGRQD-----QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQS 97 (381)
T ss_dssp TCEECCCCS--CSSC-CCHHHHHHHHHHTTTSC-----SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHH
T ss_pred CeEEecCCC--CCCC-CCHHHHHHHHHHHHHhc-----CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHH
Confidence 478998874 4566 68999999999876521 1222 2356788888888877778999999999999999998
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC---CCCCCCCCCChhHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP---DSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~ 190 (430)
+.. ++++|++.+++||++...... .+ .....++.+ ..+.. |+++
T Consensus 98 ~~~--------~gd~Vl~~~~~~~~~~~~~~~-~g------------~~~~~v~~~~~~~~~~~------------d~~~ 144 (381)
T 1v2d_A 98 LVG--------PGDEVVVLEPFFDVYLPDAFL-AG------------AKARLVRLDLTPEGFRL------------DLSA 144 (381)
T ss_dssp HCC--------TTCEEEEEESCCTTHHHHHHH-TT------------CEEEEEECEEETTEEEC------------CHHH
T ss_pred hCC--------CCCEEEEcCCCchhHHHHHHH-cC------------CEEEEEeCCCCCccCCc------------CHHH
Confidence 753 568899999999987543222 11 122334332 11111 7889
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccc--cCCCCCcee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACE--HAEIWPDFL 267 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~--~~~~~~d~~ 267 (430)
|+++++ +++++|++++ ++|++|.+ ++.+.+++|.++|++||+++|+||+|+++.. |. ...+. ..+..+++.
T Consensus 145 l~~~l~---~~~~~v~~~~-~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~ 218 (381)
T 1v2d_A 145 LEKALT---PRTRALLLNT-PMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVG 218 (381)
T ss_dssp HHTTCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEE
T ss_pred HHHhcC---cCCEEEEECC-CCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEe
Confidence 888874 4688888888 89999955 5678899999999999999999999998744 32 11111 335556677
Q ss_pred eeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--h--cCHHHHHHHHHHHHH
Q psy14484 268 CLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--K--DNILQRISQDMKKIT 342 (430)
Q Consensus 268 ~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~--~~~~~~~~~~~~~l~ 342 (430)
++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+... + ++..++++++.+++.
T Consensus 219 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 291 (381)
T 1v2d_A 219 SAGKRLEATG-YRVGWIVGPKEFMPRLAG------MRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLA 291 (381)
T ss_dssp EHHHHTTCGG-GCCEEEECCTTTHHHHHH------HHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred echhhcCCcc-cceEEEEeCHHHHHHHHH------HHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Confidence 8999987 46 799999999988887764 2234567788888888888887542 1 335566677777787
Q ss_pred HHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------CCEEEEeCCCCCCHH
Q psy14484 343 KALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---------GNTVYLMPPYILNKN 412 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---------~~~lR~~~~~~~t~e 412 (430)
+.|+++ ... ...+. |.++++.+. .. + +.+.|.++||.+.++ .+++|++++. +++
T Consensus 292 ~~L~~~-g~~---~~~~~~~~~~~~~~~-~~--------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~ 355 (381)
T 1v2d_A 292 GGLRAM-GLR---VYVPEGTYFLMAELP-GW--------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEE 355 (381)
T ss_dssp HHHHHT-TCC---EECCSBSSEEEEECT-TC--------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHH
T ss_pred HHHHHC-CCE---ecCCCcceEEEEecC-hH--------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHH
Confidence 777764 222 22233 566666655 31 1 556678899999874 3689998875 999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
++++++++|++++++
T Consensus 356 ~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 356 ELHLALERLGRVVNS 370 (381)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 81
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.97 E-value=1.2e-29 Score=246.52 Aligned_cols=343 Identities=15% Similarity=0.082 Sum_probs=234.2
Q ss_pred CCCCEEEecccccccc-cCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhc--CCCCCeEEEcCCchHH
Q psy14484 31 VSGKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASA 106 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA 106 (430)
.+|++++||..+.... .++ .+|++.+++.+++..... +....+..+..+.+++.+.+.. +.+++++++++||++|
T Consensus 35 ~~g~~~i~l~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a 113 (406)
T 1xi9_A 35 KKGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA 113 (406)
T ss_dssp HTTCCCEECCCCCGGGTTCC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred HcCCCEEEecCCCCCcCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence 3678899998885432 456 579999999998865321 1111223456667777776654 3456799999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 184 (430)
++.+++++.. +++.|++.+++|+++.......+ .....++.+. .+..
T Consensus 114 l~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~---------- 162 (406)
T 1xi9_A 114 LQLIFGALLD--------PGDEILVPGPSYPPYTGLVKFYG-------------GKPVEYRTIEEEDWQP---------- 162 (406)
T ss_dssp HHHHHHHHCC--------TTCEEEEEESCCHHHHHHHHHTT-------------CEEEEEEEEGGGTSEE----------
T ss_pred HHHHHHHhCC--------CCCEEEEcCCCCccHHHHHHHcC-------------CEEEEeecCCCcCCcC----------
Confidence 9999998743 56889999999998754433221 1222333221 1111
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~ 264 (430)
|+++|+++++ .++++|++++ ++|++|. .++++.+++|.++|++||+++|+||+|+++.+.+....+..++...
T Consensus 163 --d~~~l~~~l~---~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 235 (406)
T 1xi9_A 163 --DIDDIRKKIT---DRTKAIAVIN-PNNPTGA-LYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDV 235 (406)
T ss_dssp --CHHHHHHHCC---TTEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSS
T ss_pred --CHHHHHHhhC---cCceEEEEEC-CCCCCCC-CcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCc
Confidence 7899998885 4688888888 8899995 4677889999999999999999999999876533322332222112
Q ss_pred -cee--eeecccC-CCccccEEEE--EcH----HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHH
Q psy14484 265 -DFL--CLSKGIT-GGYLPLSLVM--TTD----KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQ 332 (430)
Q Consensus 265 -d~~--~~sK~l~-gG~~~ig~~~--~~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~ 332 (430)
+++ ++||.++ .| +|+|+++ +++ ++++.+.. ..... ++.+++++.++.++|+... .+...+
T Consensus 236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~------~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~ 307 (406)
T 1xi9_A 236 PVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDR------LARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMK 307 (406)
T ss_dssp CEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHH------HHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHH
T ss_pred eEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHH------HHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHH
Confidence 343 6789997 46 7999999 888 88887764 11222 6677888888888885221 133456
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------CCEEEE
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------GNTVYL 403 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~~~lR~ 403 (430)
+++++.+++.+.|+++ +.+....+. |.++++.+. .... .. ..++.+.|+ ++||.+.++ .+++||
T Consensus 308 ~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRi 380 (406)
T 1xi9_A 308 KLKERRDYIYKRLNEI---PGISTTKPQGAFYIFPKIE-VGPW-KN--DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRA 380 (406)
T ss_dssp HHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEEC-SCSC-SS--HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEE
T ss_pred HHHHHHHHHHHHHHhC---CCCeeecCCeeEEEEEecC-ccCC-CC--HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEE
Confidence 6677777777777654 343333344 444444555 3100 11 357888887 889999875 468999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++ ++++++++++++|++++++++
T Consensus 381 s~~--~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 381 VFL--PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp ECC--SCHHHHHHHHHHHHHHHHHC-
T ss_pred Eec--CCHHHHHHHHHHHHHHHHHHh
Confidence 887 899999999999999998754
No 82
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.97 E-value=6.4e-29 Score=239.81 Aligned_cols=332 Identities=11% Similarity=0.070 Sum_probs=230.6
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEV 109 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~ 109 (430)
..++||.++. ..+| .+|++.+++.+++... ..+....+..++.+.+++.+.+.++ .+++ +|++++||++|++.
T Consensus 30 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~ 106 (386)
T 1u08_A 30 HQAINLSQGF--PDFD-GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYA 106 (386)
T ss_dssp TTCEECCCSS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHH
T ss_pred CCeEEecCCC--CCCC-CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHH
Confidence 3589998874 3566 6899999999988652 1111112234566677777766555 4577 99999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAI 188 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 188 (430)
+++++.. +++.|++.+++||++.......+ .....++.+. .+.. |+
T Consensus 107 ~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------------d~ 153 (386)
T 1u08_A 107 AITALVR--------NGDEVICFDPSYDSYAPAIALSG-------------GIVKRMALQPPHFRV------------DW 153 (386)
T ss_dssp HHHHHCC--------TTCEEEEEESCCTTHHHHHHHTT-------------CEEEEEECCTTTCCC------------CH
T ss_pred HHHHhCC--------CCCEEEEeCCCchhHHHHHHHcC-------------CEEEEeecCcccCcC------------CH
Confidence 9998743 56789999999998754332211 1223444332 1112 78
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----cccc-cCCCC
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF----FACE-HAEIW 263 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~----~~~~-~~~~~ 263 (430)
++|+++++ +++++++++. ++|++|.+ ++.+.+++|.++|++||+++|+||+|+++.+.|.. ..+. ..+..
T Consensus 154 ~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (386)
T 1u08_A 154 QEFAALLS---ERTRLVILNT-PHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA 228 (386)
T ss_dssp HHHHHHCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTE
T ss_pred HHHHHhhc---ccCEEEEEeC-CCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcE
Confidence 99998884 5688888888 88999954 67789999999999999999999999987665531 1121 23444
Q ss_pred CceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHHH
Q psy14484 264 PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMKK 340 (430)
Q Consensus 264 ~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~~ 340 (430)
..+.++||.++ .| +|+|++++++++++.+.. ..+..+++.+++++.++.++|+..+ .++..++++++.++
T Consensus 229 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 301 (386)
T 1u08_A 229 VAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRK------VHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDI 301 (386)
T ss_dssp EEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHH------HHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHH
T ss_pred EEEecchhhcCCcc-cceEEEEcCHHHHHHHHH------HHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 55668999998 56 799999999998887765 2334567788888888888887431 13455666667777
Q ss_pred HHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec---------CCEEEEeCCCCC
Q psy14484 341 ITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI---------GNTVYLMPPYIL 409 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~---------~~~lR~~~~~~~ 409 (430)
+.+.|+++ + +....+ .|.++++.+. ...... ..++++.|. ++||.+.++ .+++|++++ .
T Consensus 302 l~~~L~~~---g-~~~~~~~~g~~~~~~~~-~~~~~~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~ 371 (386)
T 1u08_A 302 LVNALNES---R-LEILPCEGTYFLLVDYS-AVSTLD---DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--K 371 (386)
T ss_dssp HHHHTTSS---S-CEECCCCBSSEEEEECT-TTCCSC---HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--S
T ss_pred HHHHHHHC---C-CeecCCCceEEEEEecC-CCCCCC---HHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--C
Confidence 77766654 2 222223 3567777665 321001 356888776 689999864 258999876 5
Q ss_pred CHHHHHHHHHHHHH
Q psy14484 410 NKNEIQHMTSAIFQ 423 (430)
Q Consensus 410 t~e~i~~~~~~l~~ 423 (430)
++++|++++++|++
T Consensus 372 ~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 372 KESTLLAAAERLRQ 385 (386)
T ss_dssp CHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhh
Confidence 89999999999864
No 83
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.97 E-value=1.5e-29 Score=242.34 Aligned_cols=321 Identities=16% Similarity=0.147 Sum_probs=229.8
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
+.++||.++ .++++ .+|++++++.+++.... .++.....++++.+++.++.++++|++++||++|++.+++.
T Consensus 30 ~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~ 101 (365)
T 3get_A 30 KEVIKLASN--ENPFG-TPPKAIECLRQNANKAH-----LYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHS 101 (365)
T ss_dssp SCCEECSSC--CCTTC-SCHHHHHHHHHHGGGTT-----SCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHH
T ss_pred CceEEecCC--CCCCC-CCHHHHHHHHHHHHhhc-----cCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH
Confidence 689999987 56677 78999999999876432 22222225788888888877788999999999999999998
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
+.. +++.|++.+++|+++.......+ .+...++. ++.+ .|+++|+
T Consensus 102 l~~--------~gd~vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~-------------~d~~~l~ 147 (365)
T 3get_A 102 KLN--------SKNAFLQAGVTFAMYEIYAKQCG-------------AKCYKTQSITHNL-------------DEFKKLY 147 (365)
T ss_dssp HCC--------TTCEEEECSSCCTHHHHHHHHHT-------------CEEEECSSSSCCH-------------HHHHHHH
T ss_pred HhC--------CCCEEEEeCCChHHHHHHHHHcC-------------CEEEEEecCCCCC-------------CCHHHHH
Confidence 754 56889999999987644333211 22334443 2211 2889999
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC--cc-ccc-cc---ccCCCCCc
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR--TG-KFF-AC---EHAEIWPD 265 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~--~g-~~~-~~---~~~~~~~d 265 (430)
++++ +++++|+++. ++|++|.+. +.+.+++|.++| ++|+++|+||+|+++.+ .+ ... .. ...+....
T Consensus 148 ~~l~---~~~~~v~~~~-p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 221 (365)
T 3get_A 148 ETHK---DEIKLIFLCL-PNNPLGECL-DASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLY 221 (365)
T ss_dssp HHTT---TTEEEEEEES-SCTTTCCCC-CHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEE
T ss_pred HHhC---CCCCEEEEcC-CCCCCCCCc-CHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEE
Confidence 9885 5788888887 888888554 556677777777 57999999999996642 22 111 11 12232234
Q ss_pred eeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHH
Q psy14484 266 FLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITK 343 (430)
Q Consensus 266 ~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~ 343 (430)
+.++||.++ .| +++|++++++++.+.+.. ...+++.+++++.++.++|+..+ -+...++++++.+++.+
T Consensus 222 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 292 (365)
T 3get_A 222 LGTFSKLYGLGG-LRIGYGIANANIISAFYK--------LRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKE 292 (365)
T ss_dssp EEESSSTTSCTT-TCCEEEEECHHHHHHHHH--------HSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecchHhcCcc-hheEEEEcCHHHHHHHHH--------hcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 458999997 46 799999999999888875 33456788888888888876321 13345566667777777
Q ss_pred HHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 344 ALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 344 ~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
.|+++ ++...++.|.++++.+. .. . +.++.+.|.++||.+.++ .+++|++++ ++++++++++
T Consensus 293 ~l~~~----g~~~~~~~~~~~~~~~~-~~---~---~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~ 358 (365)
T 3get_A 293 FAKKH----NIKIIDSYTNFITYFFD-EK---N---STDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFT 358 (365)
T ss_dssp HHHHT----TCEECCCSSSEEEEECS-SS---C---HHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHH
T ss_pred HHHhC----CCEECCCCCeEEEEECC-CC---C---HHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHH
Confidence 77654 22334567888777776 42 1 467999999999999986 389999876 8999999999
Q ss_pred HHHHHH
Q psy14484 420 AIFQTF 425 (430)
Q Consensus 420 ~l~~~l 425 (430)
+|++++
T Consensus 359 ~l~~~l 364 (365)
T 3get_A 359 EFDKIL 364 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998875
No 84
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.95 E-value=5.7e-33 Score=268.85 Aligned_cols=355 Identities=11% Similarity=0.085 Sum_probs=236.2
Q ss_pred eeEEeecCCceeEEEECCCC--EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC-
Q psy14484 15 LVIRSLKNSWKWSLIDVSGK--RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ- 91 (430)
Q Consensus 15 ~~~~~~~~~~~~~~~d~~g~--~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 91 (430)
.+.++++|+ ++||.+|+ .++||..+. ..++ .+|++++++.+++......+... ..++.+++++.+.+.++
T Consensus 13 ~~~~~~~g~---~~~d~~g~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~ 85 (392)
T 3b1d_A 13 APNRLSHHT---YKWKETETDPQLLPAWIAD--MDFE-VMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQY 85 (392)
Confidence 455666665 79999999 999998773 3555 58899999999886532211111 33455566666655544
Q ss_pred -CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 92 -YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 -~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
.++++|++++||++|++.+++++.. ++++|++..++||++.......+. ....++.+.
T Consensus 86 ~~~~~~v~~~~g~~~a~~~~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~ 144 (392)
T 3b1d_A 86 SFDKEDIVFVEGVVPAISIAIQAFTK--------EGEAVLINSPVYPPFARSVRLNNR-------------KLVSNSLKE 144 (392)
Confidence 4678999999999999999998864 567899999999998544332211 112222210
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
... .+ ..|+++|++.+++ .++++++++. ++|++|. .++.+++++|.++|++||+++|+||+|+++.+
T Consensus 145 ~~g--------~~-~~d~~~l~~~l~~--~~~~~v~~~~-~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 211 (392)
T 3b1d_A 145 ENG--------LF-QIDFEQLENDIVE--NDVKLYLLCN-PHNPGGR-VWEREVLEQIGHLCQKHHVILVSDEIHQDLTL 211 (392)
Confidence 000 00 0278888888863 3567777777 8888885 46677899999999999999999999998876
Q ss_pred ccc----cccccc--CCCCCceeeeecccC-CCccccEEEEEcH-HHHHhhhccCCcccccccCCC-CCCHHHHHHHHHH
Q psy14484 251 TGK----FFACEH--AEIWPDFLCLSKGIT-GGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSY-SGNPLACCAALAT 321 (430)
Q Consensus 251 ~g~----~~~~~~--~~~~~d~~~~sK~l~-gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~ 321 (430)
.|. .+.+.. .+..+++.++||.++ +| +|+|++++++ ++++.+.. .....++ +.++++++++.++
T Consensus 212 ~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~ 284 (392)
T 3b1d_A 212 FGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKH------QQLVNNHHEVSSLGYIATETA 284 (392)
Confidence 653 122221 344466779999998 57 7999999875 48777665 1222222 4577888888888
Q ss_pred HHHHhh--cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE-EEEeecCCccchhHHHHHHHHHH-HCCcEEeec
Q psy14484 322 LEIFNK--DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA-FDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI 397 (430)
Q Consensus 322 l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~ 397 (430)
|+..++ ++..++++++.+++.+.|++ ..+.+...++.|.++. +++. .... . +..+++.|+ ++||.+.++
T Consensus 285 l~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~i~~~-~~~~-~---~~~l~~~l~~~~gi~v~~g 357 (392)
T 3b1d_A 285 YRYGKPWLVALKAVLEENIQFAVEYFAQ--EAPRLKVMKPQGTYLIWLDFS-DYGL-T---DDALFTLLHDQAKVILNRG 357 (392)
Confidence 763211 23334445555555555543 1344444566677665 5655 3111 1 356888886 789999874
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 398 -------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 398 -------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+++|++++ .++++|++++++|+++++
T Consensus 358 ~~f~~~~~~~iRi~~~--~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 358 SDYGSEGELHARLNIA--APKSLVEEICKRIVCCLP 391 (392)
Confidence 257888654 578999999999998875
No 85
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.97 E-value=1.3e-29 Score=242.08 Aligned_cols=314 Identities=11% Similarity=0.110 Sum_probs=221.5
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
.++++||.+| .+++|+. |.+ + +.. ...|+.....++++.+++.++.++++|++++|++++++.+++
T Consensus 28 ~~~~i~l~~~--~~~~~~~-~~v--a----~~~-----~~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~ 93 (356)
T 1fg7_A 28 GNGDVWLNAN--EYPTAVE-FQL--T----QQT-----LNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIR 93 (356)
T ss_dssp TTCSEECSSC--CCSSCCC-CCC--C----CCC-----TTSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHH
T ss_pred CCceEEeeCC--CCCCCCC-HhH--h----hhh-----hccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHH
Confidence 3578999988 6789974 555 2 111 113333335688888888888778899999999999999999
Q ss_pred HHHHhhhhcCCCCC-cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNK-KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 113 ~~~~~~~~~g~~~~-~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+++. ++ ++|++.+++||++.......+. ....++.+.++.. |++++
T Consensus 94 ~~~~--------~g~d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~------------d~~~l 140 (356)
T 1fg7_A 94 AFCE--------PGKDAILYCPPTYGMYSVSAETIGV-------------ECRTVPTLDNWQL------------DLQGI 140 (356)
T ss_dssp HHCC--------TTTCEEEECSSSCTHHHHHHHHHTC-------------EEEECCCCTTSCC------------CHHHH
T ss_pred HHhC--------CCCCEEEEeCCChHHHHHHHHHcCC-------------EEEEeeCCCCCCC------------CHHHH
Confidence 8753 34 8899999999987654433221 2233333322222 78888
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccccc-ccCCCCCceeeee
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC-EHAEIWPDFLCLS 270 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~-~~~~~~~d~~~~s 270 (430)
+++++ ++++++++. ++|++|.+ .+.+.+++|.++|+ +|+++|+||+|++++...+...+ +..+....+.++|
T Consensus 141 ~~~i~----~~~~v~l~~-p~nptG~~-~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~s 213 (356)
T 1fg7_A 141 SDKLD----GVKVVYVCS-PNNPTGQL-INPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLS 213 (356)
T ss_dssp HTSCT----TEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESS
T ss_pred HHHhc----CCCEEEEeC-CCCCCCCC-CCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecch
Confidence 87763 577888877 88999954 67888999999999 99999999999987632222222 2222223455899
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHH
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALT 346 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~ 346 (430)
|.++ .| +|+|++++++++++.+.. ...+++.+++++.++.++|+... .+...++++++.+++.+.|+
T Consensus 214 K~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 284 (356)
T 1fg7_A 214 KAFALAG-LRCGFTLANEEVINLLMK--------VIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALK 284 (356)
T ss_dssp STTCCGG-GCCEEEEECHHHHHHHHH--------HSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCch-hhhEEEEeCHHHHHHHHH--------hcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997 56 799999999999888775 33456788998888888876422 23344566667777777776
Q ss_pred chhcCCCe-eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-c-----CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 347 SLITHPKI-INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-I-----GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 347 ~l~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-~-----~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
++ +.+ ...+..|.++++.+. + +.++.+.|.++||.+.+ + .+++|++++ ++++++++++
T Consensus 285 ~~---~~~~~~~~~~~~~~~~~~~-~--------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~ 349 (356)
T 1fg7_A 285 EI---PCVEQVFDSETNYILARFK-A--------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVID 349 (356)
T ss_dssp HS---TTEEEECCCSSSEEEEEET-T--------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHH
T ss_pred hC---CCceEECCCCCeEEEEECC-C--------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHH
Confidence 54 322 233556777776654 2 35788999999999998 3 258999876 7899999999
Q ss_pred HHHHH
Q psy14484 420 AIFQT 424 (430)
Q Consensus 420 ~l~~~ 424 (430)
+|+++
T Consensus 350 ~l~~~ 354 (356)
T 1fg7_A 350 ALRAE 354 (356)
T ss_dssp HHHTC
T ss_pred HHHhh
Confidence 98753
No 86
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.97 E-value=1.2e-28 Score=240.88 Aligned_cols=351 Identities=12% Similarity=0.104 Sum_probs=233.7
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcc---ccccCCCCCHHHHHHHHHHHhhcCC--CC-CeEEEcCCchHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE---HVMLSNLTHKPVIKLSEKLSSLTQY--KL-GHCFYGSDGASA 106 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~--~~-~~v~~~~sgteA 106 (430)
+..+|||..|. ..++ .+|++++++.+++.... .+.......++++.+++.+.+.++. .+ ++|++++||++|
T Consensus 27 ~~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a 103 (422)
T 3fvs_A 27 EHDVVNLGQGF--PDFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA 103 (422)
T ss_dssp TSCCEECCCSS--CSSC-CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHH
T ss_pred cCCceEeCCCC--CCCC-CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHH
Confidence 45788988874 3444 68999999999987632 1122223346677788887776653 34 589999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCC--CCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSR--NINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 184 (430)
++.+++.+.. +++.|++.+++||++.......+. ....++.+... .+. ......+
T Consensus 104 ~~~~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~G~-~~~~~~~- 160 (422)
T 3fvs_A 104 LFTAFQALVD--------EGDEVIIIEPFFDCYEPMTMMAGG-------------RPVFVSLKPGPIQNGE-LGSSSNW- 160 (422)
T ss_dssp HHHHHHHHCC--------TTCEEEEEESCCTTHHHHHHHTTC-------------EEEEEECBCCCCCSSS-CCBGGGS-
T ss_pred HHHHHHHHcC--------CCCEEEEcCCCchhhHHHHHHcCC-------------EEEEEecccccccccc-cccccCC-
Confidence 9999998754 667899999999997544333222 12233332100 000 0000000
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-cccccC---
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEHA--- 260 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~~--- 260 (430)
..|+++|+++++ +++++|+++. ++|++|.+ ++++.+++|.++|++||+++|+||+|+++.+.|.. ..+...
T Consensus 161 ~~d~~~l~~~~~---~~~~~v~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 235 (422)
T 3fvs_A 161 QLDPMELAGKFT---SRTKALVLNT-PNNPLGKV-FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM 235 (422)
T ss_dssp BCCHHHHHTTCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT
T ss_pred CCCHHHHHhhcC---CCceEEEECC-CCCCCCcC-CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccc
Confidence 017888888875 4688888888 89999955 57888999999999999999999999988776642 222222
Q ss_pred -CCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-----hhcC----
Q psy14484 261 -EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-----NKDN---- 329 (430)
Q Consensus 261 -~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-----~~~~---- 329 (430)
+....+.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+.. ..++
T Consensus 236 ~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 308 (422)
T 3fvs_A 236 WERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRT------VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQ 308 (422)
T ss_dssp GGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHH------HHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHH
T ss_pred cCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHH------HHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHH
Confidence 22244557899997 56 799999999999887765 345567888999998888888741 1123
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCc--------cchhHHHHHHHHHH-HCCcEEeec---
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE--------QIETFSKKFFVAAL-KNELLLRPI--- 397 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~a~~~~~~l~-~~Gv~~~~~--- 397 (430)
..++++++.+++.+.|+++ +.....+..|.++++.+. .... .......++++.++ ++||.+.++
T Consensus 309 ~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f 384 (422)
T 3fvs_A 309 FPQAMQRCRDHMIRSLQSV---GLKPIIPQGSYFLITDIS-DFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIF 384 (422)
T ss_dssp HHHHHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECH-HHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHc---CCeecCCCeeeEEEEech-hhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHh
Confidence 3455566666666666654 222123445666666654 2100 00000246777755 569998873
Q ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 ---------GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 ---------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++||+++ .++++|++++++|++++++
T Consensus 385 ~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 385 YSVPHQKHFDHYIRFCFV--KDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp SCHHHHTTSCSEEEEECC--CCHHHHHHHHHHHHHHHHC
T ss_pred cCCcCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHhh
Confidence 368999765 4999999999999998875
No 87
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.97 E-value=1e-28 Score=242.24 Aligned_cols=352 Identities=12% Similarity=0.024 Sum_probs=230.4
Q ss_pred EEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-------------cccCCCCCHHHHHHHHHHHhhcC---
Q psy14484 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-------------VMLSNLTHKPVIKLSEKLSSLTQ--- 91 (430)
Q Consensus 28 ~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~l~~~~~--- 91 (430)
.||.+++.+.++..|...+.++ +|.+.+++.++.....+ +....+..++.+.+++.+.+..+
T Consensus 30 ~y~~~~~p~~~i~lg~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~ 107 (435)
T 3piu_A 30 PYHEVHNTNGIIQMGLAENQLC--FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKV 107 (435)
T ss_dssp BCBTTTBTTSBEECSSCCCCSS--HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSS
T ss_pred CCCcccCCCCeEEecccccccc--HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCC
Confidence 3677777666655665566665 67777777765443211 11111223445555555554322
Q ss_pred -CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 92 -YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 92 -~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
..++++++++||++|++.++++++. +++.|++.+++|+++........+ .+...++.+.
T Consensus 108 ~~~~~~v~~~~gg~~a~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g------------~~~~~~~~~~ 167 (435)
T 3piu_A 108 TFDPNHLVLTAGATSANETFIFCLAD--------PGEAVLIPTPYYPGFDRDLKWRTG------------VEIVPIHCTS 167 (435)
T ss_dssp CCCGGGEEEEEHHHHHHHHHHHHHCC--------TTCEEEEEESCCTTHHHHTTTTTC------------CEEEEEECCG
T ss_pred CCCHHHEEEcCChHHHHHHHHHHhcC--------CCCeEEECCCccccHHHHHHHhcC------------CEEEEeeCCC
Confidence 4578999999999999999998864 568899999999887543321222 1223333321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
..... .|+++|+++++++ ..++++|++++ ++|++|. .++.+.+++|.++|++||+++|+||+|++
T Consensus 168 ~~~~~----------~d~~~l~~~l~~~~~~~~~~~~v~i~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 235 (435)
T 3piu_A 168 SNGFQ----------ITETALEEAYQEAEKRNLRVKGVLVTN-PSNPLGT-TMTRNELYLLLSFVEDKGIHLISDEIYSG 235 (435)
T ss_dssp GGTSC----------CCHHHHHHHHHHHHHTTCCEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred ccCCc----------CCHHHHHHHHHHHHhcCCCeEEEEEcC-CCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEeccccc
Confidence 11000 1788999988753 23688888888 8888885 56677899999999999999999999998
Q ss_pred CCCcccccc-cccC----CCC-----Cc----eeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCC
Q psy14484 248 CGRTGKFFA-CEHA----EIW-----PD----FLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGN 311 (430)
Q Consensus 248 ~g~~g~~~~-~~~~----~~~-----~d----~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~ 311 (430)
+.+.+..+. .... ++. +| +.+|||+++ +| +|+|++++ ++.+.+.+.. +..++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~--------~~~~~~~~ 306 (435)
T 3piu_A 236 TAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK--------MSSFGLVS 306 (435)
T ss_dssp GCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH--------HGGGSCCC
T ss_pred cccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH--------HhhcCCCC
Confidence 666554322 1111 111 33 558999998 57 79999999 5667666654 34455667
Q ss_pred HHHHHHHHHHHHHHh-----hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccc-hhHHHHHH
Q psy14484 312 PLACCAALATLEIFN-----KDNILQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQI-ETFSKKFF 384 (430)
Q Consensus 312 ~~~~~aa~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~-~~~a~~~~ 384 (430)
++++.++.++++..+ .++..++++++.+++.+.|+++ ++....+.+ .++++.+. ...... ...+.+++
T Consensus 307 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~g~~~~~~l~-~~~~~~~~~~~~~~~ 381 (435)
T 3piu_A 307 SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS----GISCLNGNAGLFCWVDMR-HLLRSNTFEAEMELW 381 (435)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----TCEECCCCSSSEEEEECG-GGSSSSSHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcccCCCeeEEEEEEcc-cccccCCchhHHHHH
Confidence 887777777765221 1234455666666777777654 222334444 77777776 421111 11135788
Q ss_pred HHHHHC-CcEEeec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 385 VAALKN-ELLLRPI-------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 385 ~~l~~~-Gv~~~~~-------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.|+++ ||.+.++ .+++||+++.. ++++|++++++|+++++++
T Consensus 382 ~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 382 KKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp HHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHH
Confidence 888877 9999874 37899998655 9999999999999998865
No 88
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.7e-29 Score=244.51 Aligned_cols=336 Identities=10% Similarity=0.018 Sum_probs=230.7
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhhcC--CCCC-eEEEcCCchHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVMLSNLTHKPVIKLSEKLSSLTQ--YKLG-HCFYGSDGASAVEVA 110 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~sgteA~~~a 110 (430)
.++||.++. ..++ .+|.+.+++.+++... ..+....+..++.+.+++.+.+.++ .+++ +|++++||++|++.+
T Consensus 26 ~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~ 102 (411)
T 2o0r_A 26 GAVNLGQGF--PDED-GPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAA 102 (411)
T ss_dssp TCEESSCSS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHH
T ss_pred CeeeccCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHH
Confidence 478998874 4566 6899999999998762 1111112234566777777776655 4567 999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC---CCCCCCCChhHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS---RNINKGNSANEIARCA 187 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d 187 (430)
++++.. +++.|++.+++||++....... + .....++.+.. +. .|
T Consensus 103 ~~~~~~--------~gd~Vl~~~~~y~~~~~~~~~~-g------------~~~~~v~~~~~~~~~~------------~d 149 (411)
T 2o0r_A 103 VLGLVE--------PGSEVLLIEPFYDSYSPVVAMA-G------------AHRVTVPLVPDGRGFA------------LD 149 (411)
T ss_dssp HHHHCC--------TTCEEEEEESCCTTHHHHHHHT-T------------CEEEEEECEEETTEEE------------CC
T ss_pred HHHhcC--------CCCEEEEeCCCcHhHHHHHHHc-C------------CEEEEeeccccccCCC------------CC
Confidence 998753 5688999999999875433221 1 12233333211 11 17
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc-ccccc----CCC
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF-FACEH----AEI 262 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~-~~~~~----~~~ 262 (430)
+++|+++++ +++++|++++ ++|++|. .++.+++++|.++|++||+++|+||+|+++.+.|.. ..+.. .+.
T Consensus 150 ~~~l~~~l~---~~~~~v~l~~-~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 224 (411)
T 2o0r_A 150 ADALRRAVT---PRTRALIINS-PHNPTGA-VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAER 224 (411)
T ss_dssp HHHHHHHCC---TTEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred HHHHHHhhc---cCceEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCC
Confidence 899998885 4688888888 8899995 467889999999999999999999999988765532 12211 222
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
...+.++||.++ .| +|+|++++++++++.+.. .....+++.++++++++.++|+..+ -+...++++++.+
T Consensus 225 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 225 TITISSAAKMFNCTG-WKIGWACGPAELIAGVRA------AKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp EEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHH------HHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHH------HHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 334557899998 56 799999999998887765 2233466677777777777776421 1345566777777
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec------------------CCE
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI------------------GNT 400 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~------------------~~~ 400 (430)
++.+.|+++ .... ..+..|.++++.+. ...... ..++.+.|+ ++||.+.++ .++
T Consensus 298 ~l~~~L~~~-g~~~--~~~~~g~~~~~~~~-~~~~~~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~ 370 (411)
T 2o0r_A 298 RLAAGLTEI-GFAV--HDSYGTYFLCADPR-PLGYDD---STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHL 370 (411)
T ss_dssp HHHHHHHHH-TCEE--CCCCBSSEEEEECG-GGTCCC---HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGC
T ss_pred HHHHHHHHc-CCEe--cCCCeeEEEEEecC-CCCCCC---HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCe
Confidence 787777765 2211 11233557777776 311001 356888876 679998763 246
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 401 VYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 401 lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+||+++ .+++++++++++|++++++
T Consensus 371 iRis~~--~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 371 VRFTFC--KRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp EEEECC--SCHHHHHHHHHHHGGGGC-
T ss_pred EEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 999875 4899999999999887653
No 89
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=3.4e-29 Score=239.48 Aligned_cols=324 Identities=13% Similarity=0.102 Sum_probs=227.5
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
.+|+.++||.++ .+.++ .+|+|++++.+++...... ...++.....++++.+++.++.++++|++++||++|++.+
T Consensus 23 ~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~~-~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~ 98 (360)
T 3hdo_A 23 PDIASWIKLNTN--ENPYP-PSPEVVKAILEELGPDGAA-LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNL 98 (360)
T ss_dssp SCCTTSEECSSC--CCSSC-CCHHHHHHHHHHHTTTCGG-GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred ccccceeeccCC--CCCCC-CCHHHHHHHHHHHhcccch-hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHH
Confidence 477889999988 45565 6899999999998763111 1123333346788888888877788999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++.. +++.|++.+++|+++.......+ .....++.+..+ ++++
T Consensus 99 ~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~--------------~~~~ 143 (360)
T 3hdo_A 99 IRAFAA--------EGEEIGYVHPSYSYYGTLAEVQG-------------ARVRTFGLTGDF--------------RIAG 143 (360)
T ss_dssp HHHHCC--------TTCEEEEESSSCTHHHHHHHHHT-------------CEEEEECBCTTS--------------SBTT
T ss_pred HHHHhC--------CCCEEEEcCCChHHHHHHHHHCC-------------CEEEEeeCCCCC--------------CHHH
Confidence 998754 56889999999998754433322 222344433211 1222
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 270 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s 270 (430)
++ +.. ++++++++. ++|++|.+.+ ++++.++|+++|+++|+||+|++|...+.....+..+....+.++|
T Consensus 144 l~---~~~--~~~~v~i~~-p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~s 213 (360)
T 3hdo_A 144 FP---ERY--EGKVFFLTT-PNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLS 213 (360)
T ss_dssp CC---SSB--CSSEEEEES-SCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEEST
T ss_pred HH---hhc--CCCEEEEeC-CCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecch
Confidence 21 111 233666777 7888998887 8899999999999999999999774332211122233334456899
Q ss_pred cccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHch
Q psy14484 271 KGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 271 K~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l 348 (430)
|.++ +| +++|++++++++++.+.. ...+++.++++++++.++|+..+ -++..++++++.+++.+.|+++
T Consensus 214 K~~g~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 214 KSYSLAG-MRIGLAIARPEVIAALDK--------IRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp TTTSCTT-SCCEEEECCHHHHHHHHH--------HSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhcCCc-cceeeEeeCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9987 46 799999999999888876 33457789999998888887422 1344566677777777777654
Q ss_pred hcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 349 ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-----NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-----~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.+...++.|.++++.+. .. . +.++.+.|.++||.+.+++ +++|++++ +++++++++++|++
T Consensus 285 ----~~~~~~~~~~~~~~~~~-~~---~---~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~ 350 (360)
T 3hdo_A 285 ----GYDVIPSQGNYLFATPP-DR---D---GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKE 350 (360)
T ss_dssp ----TCEECCCSSSEEEEECT-TC---C---HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHH
T ss_pred ----CCEEcCCCccEEEEECC-CC---C---HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 22334567788777654 21 1 3678899999999998753 68999876 99999999999988
Q ss_pred HHH
Q psy14484 424 TFN 426 (430)
Q Consensus 424 ~l~ 426 (430)
+.+
T Consensus 351 ~~~ 353 (360)
T 3hdo_A 351 IGE 353 (360)
T ss_dssp HHC
T ss_pred Hhc
Confidence 753
No 90
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=5.8e-29 Score=242.04 Aligned_cols=337 Identities=12% Similarity=0.106 Sum_probs=230.3
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAV 107 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~ 107 (430)
.+|++++||.++. ..++ .+|++.+++ +++..... +....+..++.+.+++.+.+..+ .+++++++++||++|+
T Consensus 40 ~~g~~~i~l~~~~--~~~~-~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~ 115 (409)
T 2gb3_A 40 KRGVRIHHLNIGQ--PDLK-TPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI 115 (409)
T ss_dssp HTTCEEEECSSCC--CCSC-CCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHH
T ss_pred hcCCCEEeccCCC--CCCC-CCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHH
Confidence 3688999998874 3566 578999999 87754321 11112234566667777665443 4567999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.+++++.. +++.|++.+++||++.......+ .....++.+..... +
T Consensus 116 ~~~~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------~ 162 (409)
T 2gb3_A 116 LFSFAVIAN--------PGDEILVLEPFYANYNAFAKIAG-------------VKLIPVTRRMEEGF------------A 162 (409)
T ss_dssp HHHHHHHCC--------TTCEEEEEESCCTHHHHHHHHHT-------------CEEEEEECCGGGTS------------C
T ss_pred HHHHHHhCC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEeccCCCCCC------------c
Confidence 999998743 56889999999998754332211 12233333210000 1
Q ss_pred -HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCc
Q psy14484 188 -IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPD 265 (430)
Q Consensus 188 -~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d 265 (430)
+++|+++++ +++++|++++ ++|++|.+ ++.+.+++|.++|+++|+++|+||+|+++.+.+..... ..+. ..|
T Consensus 163 ~~~~l~~~l~---~~~~~v~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~ 236 (409)
T 2gb3_A 163 IPQNLESFIN---ERTKGIVLSN-PCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKV 236 (409)
T ss_dssp CCTTGGGGCC---TTEEEEEEES-SCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTE
T ss_pred cHHHHHHhhC---cCCeEEEECC-CCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCE
Confidence 456666664 4688888888 88888854 56788999999999999999999999987665533222 1222 246
Q ss_pred ee--eeecccC-CCccccEEEEEcH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh--hcCHHHHHHHHHH
Q psy14484 266 FL--CLSKGIT-GGYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN--KDNILQRISQDMK 339 (430)
Q Consensus 266 ~~--~~sK~l~-gG~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~--~~~~~~~~~~~~~ 339 (430)
++ ++||.++ +| +|+|++++++ ++++.+.. .....+ +.+++++.++.++|+... .+...++++++.+
T Consensus 237 i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~------~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 308 (409)
T 2gb3_A 237 VVIDSVSKKFSACG-ARVGCLITRNEELISHAMK------LAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVE 308 (409)
T ss_dssp EEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHH------HHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred EEEecchhccCCcc-ceEEEEEECcHHHHHHHHH------HHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 55 7899997 46 7999999998 88887764 223334 678888888888774211 1344566777777
Q ss_pred HHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC------CcEEeec----------CCEEEE
Q psy14484 340 KITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN------ELLLRPI----------GNTVYL 403 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~------Gv~~~~~----------~~~lR~ 403 (430)
++.+.|+++ ....+ ..+..|.++++.+. .. . +.++.+.|.++ ||.+.++ .+++|+
T Consensus 309 ~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-~~---~---~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRi 379 (409)
T 2gb3_A 309 TVLKKLEEH-GLKRF-TKPSGAFYITAELP-VE---D---AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRI 379 (409)
T ss_dssp HHHHHHHHT-TCCCB-CCCSBSSEEEEECS-SS---C---HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEE
T ss_pred HHHHHHHHc-Cceee-eCCCeeEEEEEEeC-CC---C---HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEE
Confidence 888888765 32220 11223555555553 21 1 36788999887 9999874 368999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++ ++++++++++++|++++.++.
T Consensus 380 s~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 380 ACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp ECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred EeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 887 899999999999999987653
No 91
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.96 E-value=5.6e-29 Score=243.74 Aligned_cols=346 Identities=8% Similarity=0.039 Sum_probs=231.1
Q ss_pred CEEEecccccccccCCCCCHHH--HHHHHHHHhh-c-cccccCCCCCHHHHHHHHHHHhhc-CCCCCe---EEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYI--NKALKNQLNK-L-EHVMLSNLTHKPVIKLSEKLSSLT-QYKLGH---CFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v--~~a~~~~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~---v~~~~sgte 105 (430)
+.++||..|... .+|+ +|.+ .+++.+++.. . ..+....+..++.+.+++.+.+.. +.++++ |++|+||++
T Consensus 47 ~~~i~l~~g~~~-~~~~-~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~ 124 (430)
T 2x5f_A 47 STTYNATIGMAT-NKDG-KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTH 124 (430)
T ss_dssp TCSEECCCSSCE-ETTE-ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHH
T ss_pred CCcEEeeeeecc-CCCC-chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchH
Confidence 568999988542 6775 5666 7777666543 1 111111112233444444443322 556778 999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhc-cCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA-VTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 183 (430)
|++.+++++.. +++.|++.+++||++...... .+ .....++.+. ++..
T Consensus 125 al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~--------- 174 (430)
T 2x5f_A 125 GLSLVGDLFVN--------QDDTILLPEHNWGNYKLVFNTRNG-------------ANLQTYPIFDKDGHY--------- 174 (430)
T ss_dssp HHHHHHHHHCC--------TTCEEEEESSCCTHHHHHHTTTTC-------------CEEEEECCBCTTSCB---------
T ss_pred HHHHHHHHHhC--------CCCEEEEcCCcCccHHHHHHHhcC-------------CeEEEEeccCccCCc---------
Confidence 99999998754 568899999999987544332 21 1223343322 1111
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh-----cCCEEEEeccccCCCCccccc-cc
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN-----YNIHLIADEIAVGCGRTGKFF-AC 257 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~-----~gi~li~DEv~~g~g~~g~~~-~~ 257 (430)
|+++|++++++++.+++++++.. ++|++| ..++.+.+++|.++|++ ||+++|+||+|+++.+.|..+ .+
T Consensus 175 ---d~~~l~~~l~~~~~~~~~v~i~~-p~nptG-~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 249 (430)
T 2x5f_A 175 ---TTDSLVEALQSYNKDKVIMILNY-PNNPTG-YTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSL 249 (430)
T ss_dssp ---CSHHHHHHHHHCCSSEEEEEECS-SCTTTC-CCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCH
T ss_pred ---CHHHHHHHHHhcCCCCEEEEEcC-CCCCCC-CcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHH
Confidence 78899999986544677777776 788888 45788899999999999 999999999999886655421 11
Q ss_pred --ccCCCCCc------eeeeecccC-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH-H
Q psy14484 258 --EHAEIWPD------FLCLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE-I 324 (430)
Q Consensus 258 --~~~~~~~d------~~~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~-~ 324 (430)
...+..++ +.++||.++ .| +|+|++++ ++++++.+... .....+..+++.+++++.++.++|+ .
T Consensus 250 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~ 326 (430)
T 2x5f_A 250 FTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAK--VKGLIRSNISSGPLPTQSAVKHVLKNN 326 (430)
T ss_dssp HHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHH--HHHHHHTTTSSCCHHHHHHHHHHHHSC
T ss_pred HHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHH--HhhhhhcccCCCChHHHHHHHHHHccC
Confidence 22122344 447899997 56 79999999 99988877640 0011122677889999998888887 3
Q ss_pred ---Hhh-cCHHHHHHHHHHHHHHHHHchh-cCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec
Q psy14484 325 ---FNK-DNILQRISQDMKKITKALTSLI-THPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI 397 (430)
Q Consensus 325 ---~~~-~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~ 397 (430)
.+. +...++++++.+++.+.|++.. .. .+....+.+ .++++.+. .. . ..++++.|.+ +||.+.++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~~~~~~~~-~~----~--~~~~~~~l~~~~gi~v~~g 398 (430)
T 2x5f_A 327 KQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGYFMAIKVH-DV----D--PEALRKHLIDKYSIGVIAL 398 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSSEEEEEES-SS----C--HHHHHHHHHHHHCEECEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceEEEEeCCC-CC----C--HHHHHHHHHHhCCEEEecC
Confidence 221 2255566667777777776321 22 233334444 45666664 21 1 3578899988 89999986
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++. .+++++++++++|+++++++
T Consensus 399 ~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 399 NATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp SSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 5789999885 59999999999999998764
No 92
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=3.8e-28 Score=234.50 Aligned_cols=334 Identities=14% Similarity=0.136 Sum_probs=232.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccC---CCCC--HHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLS---NLTH--KPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~---~~~~--~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
++..|+|.. ..|+.+|++++++.+++....+.... .+.. +...++++.+++.++.+++++++++||++|
T Consensus 15 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a 88 (390)
T 1elu_A 15 ANKTYFNFG------GQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTG 88 (390)
T ss_dssp TTSEECCTT------TCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHH
T ss_pred CCeEEecCC------ccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHH
Confidence 345565532 36778899999999988764321111 1222 567889999999998777799999999999
Q ss_pred HHHHHHHH-HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHH
Q psy14484 107 VEVALKMS-FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEI 183 (430)
Q Consensus 107 ~~~al~~~-~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 183 (430)
++.+++++ .. ++++|++.+++||++......... ........++.+ +.+..
T Consensus 89 ~~~~~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~~~~~~~--------- 142 (390)
T 1elu_A 89 CDIVLWGLDWH--------QGDEILLTDCEHPGIIAIVQAIAA---------RFGITYRFFPVAATLNQGD--------- 142 (390)
T ss_dssp HHHHHHHSCCC--------TTCEEEEETTCCHHHHHHHHHHHH---------HHCCEEEEECCGGGSSSSC---------
T ss_pred HHHHHhCCCCC--------CCCEEEEecCcccHHHHHHHHHHH---------HhCcEEEEEcCCCCCCccc---------
Confidence 99999987 32 568899999999986432111000 001123344443 22222
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH----hcCCEEEEeccccCCCCccccccccc
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN----NYNIHLIADEIAVGCGRTGKFFACEH 259 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~----~~gi~li~DEv~~g~g~~g~~~~~~~ 259 (430)
|+++|++.++ +++++|++++ ++|++|.+.+ +++|.++|+ ++|+++|+||+|+ ++..+ .+.
T Consensus 143 ---d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~----~~~ 206 (390)
T 1elu_A 143 ---AAAVLANHLG---PKTRLVILSH-LLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLP----LDF 206 (390)
T ss_dssp ---HHHHHHTTCC---TTEEEEEEES-BCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBC----CCT
T ss_pred ---hHHHHHHhcC---CCceEEEEec-cccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcC----CCh
Confidence 8899888885 4789999999 9999998877 999999999 9999999999997 54332 122
Q ss_pred CCCCCceee--eecccCCCccccEEEEEcHHHHHhhhccCC-ccc---------------ccccCCCCCCHHHHHHHHHH
Q psy14484 260 AEIWPDFLC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INI---------------FLHSHSYSGNPLACCAALAT 321 (430)
Q Consensus 260 ~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~-~~~---------------~~~~~t~~~~~~~~~aa~~~ 321 (430)
....+|+++ ++|.+.+| .++|++++++++++.+..... .+. .....+.+.++.++.++.++
T Consensus 207 ~~~~~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 285 (390)
T 1elu_A 207 SRLEVDYYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAA 285 (390)
T ss_dssp TTSCCSEEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHH
T ss_pred hhcCCCEEEccccccccCC-CceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHH
Confidence 234568776 88977776 589999999988776653100 000 00112234567777777777
Q ss_pred HHHHhhcC----HHHHHHHHHHHHHHHHHchhcCCCeeeE---eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEE
Q psy14484 322 LEIFNKDN----ILQRISQDMKKITKALTSLITHPKIINF---RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLL 394 (430)
Q Consensus 322 l~~~~~~~----~~~~~~~~~~~l~~~l~~l~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~ 394 (430)
++.+.+.+ ..++++++.+++.+.|+++ +++... ++.|.++.+.+. .+.. ..++.+.|.++||.+
T Consensus 286 l~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~gi~v 356 (390)
T 1elu_A 286 LQLHQRQGTAEERYQAICQRSEFLWRGLNQL---PHVHCLATSAPQAGLVSFTVD-SPLG-----HRAIVQKLEEQRIYL 356 (390)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS---TTEEESCSSCCSSSEEEEEEC-SSSC-----HHHHHHHHHHTTEEC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc---CCcEEecCccccccEEEEEcC-CCCC-----HHHHHHHHHHCCEEE
Confidence 87665433 4566677777777777664 333222 457888888775 3211 357889999999999
Q ss_pred eecC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 395 RPIG--NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 395 ~~~~--~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.++. +++|++++..++++++++++++|++
T Consensus 357 ~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 357 RTIADPDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp EEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred EecCCCCeEEEecccCCCHHHHHHHHHHHHh
Confidence 9874 8999999999999999999999865
No 93
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=3.1e-28 Score=235.37 Aligned_cols=327 Identities=13% Similarity=-0.005 Sum_probs=222.9
Q ss_pred CCHHHHHHHHHHHhhccccccC-CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhc-----CCC
Q psy14484 51 SNSYINKALKNQLNKLEHVMLS-NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNK-----GFL 124 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~-----g~~ 124 (430)
.+|++.+++.+++......... ....+...++++++++.++.+.+++++++||++|++.++++++.....+ +.+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~ 121 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKN 121 (397)
T ss_dssp CCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCC
Confidence 4789999999887653211111 1224566789999999998888899999999999999999987641110 112
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEE
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 204 (430)
+++.|++.+++|+++....... ..+...++.+..+.. |+++|++++++. ++++
T Consensus 122 ~gd~vl~~~~~~~~~~~~~~~~-------------g~~~~~v~~~~~~~~------------d~~~l~~~i~~~--~~~~ 174 (397)
T 3f9t_A 122 EHPKIIVPITAHFSFEKGREMM-------------DLEYIYAPIKEDYTI------------DEKFVKDAVEDY--DVDG 174 (397)
T ss_dssp SSCEEEEETTCCTHHHHHHHHH-------------TCEEEEECBCTTSSB------------CHHHHHHHHHHS--CCCE
T ss_pred CCeEEEECCcchhHHHHHHHHc-------------CceeEEEeeCCCCcC------------CHHHHHHHHhhc--CCeE
Confidence 4788999999998754333221 123345555433332 889999999842 5677
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC--ccc---------ccccccCCCCCceeeeeccc
Q psy14484 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR--TGK---------FFACEHAEIWPDFLCLSKGI 273 (430)
Q Consensus 205 vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~--~g~---------~~~~~~~~~~~d~~~~sK~l 273 (430)
+++++ +++++|.+.+ +++|.++|++||+++|+||+|+++.. .+. .+.+.. ++.+.+.+++|.+
T Consensus 175 v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~ 248 (397)
T 3f9t_A 175 IIGIA-GTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMG 248 (397)
T ss_dssp EEEEB-SCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTT
T ss_pred EEEEC-CCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEcccccc
Confidence 88888 8899998877 99999999999999999999986422 221 222333 4444455677988
Q ss_pred CCCccccEEEEEcHH-HHHhhhccCCcccccc--------cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q psy14484 274 TGGYLPLSLVMTTDK-IYNSIYYKNNINIFLH--------SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 344 (430)
Q Consensus 274 ~gG~~~ig~~~~~~~-~~~~~~~~~~~~~~~~--------~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~ 344 (430)
++| .++|+++++++ +.+.+.. ..++.. +++...+++++.++.+.+....-++..++++++.+++.+.
T Consensus 249 ~~~-~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (397)
T 3f9t_A 249 HCP-IPSGGILFKDIGYKRYLDV---DAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKK 324 (397)
T ss_dssp CCC-SSCEEEEESSGGGGGGTCE---ECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCceEEEEeCHHHHHhhcc---CCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 777 69999988765 4443322 001111 1222234555555555554332345677788888899998
Q ss_pred HHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHHHHHH
Q psy14484 345 LTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMTSAIF 422 (430)
Q Consensus 345 l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~~~l~ 422 (430)
|+++ ....+. .+.+.++.+... . ...+.+.|.++||.+.++. +++|++++..++++++++++++|+
T Consensus 325 L~~~-g~~~~~--~~~~~~~~~~~~-~--------~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~~~l~ 392 (397)
T 3f9t_A 325 LKEN-NFKPVI--EPILNIVAIEDE-D--------YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFIEILN 392 (397)
T ss_dssp HHHT-TCCBSS--CCSSSEEEEECT-T--------HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHC-CCEEEc--CCCccEEEEEeC-C--------HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 8876 333222 245666666554 2 3679999999999998875 899999999999999999999999
Q ss_pred HHHH
Q psy14484 423 QTFN 426 (430)
Q Consensus 423 ~~l~ 426 (430)
+++.
T Consensus 393 ~~l~ 396 (397)
T 3f9t_A 393 SIKR 396 (397)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 8765
No 94
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.96 E-value=1.4e-27 Score=231.59 Aligned_cols=330 Identities=10% Similarity=0.023 Sum_probs=224.5
Q ss_pred CCCCHHHHHHHHHHHhhcccccc-CC-----CCCHHHHHHHHHHHhhcCC-CCCeEEEcCCchHHHHHHHHHHHHhhhhc
Q psy14484 49 GHSNSYINKALKNQLNKLEHVML-SN-----LTHKPVIKLSEKLSSLTQY-KLGHCFYGSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 49 G~~~p~v~~a~~~~~~~~~~~~~-~~-----~~~~~~~~l~~~l~~~~~~-~~~~v~~~~sgteA~~~al~~~~~~~~~~ 121 (430)
|+.+|++.+++.+++........ .. ...+...++++.+++.++. +++++++++||++|++.++++++.+..
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~-- 110 (406)
T 1kmj_A 33 AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNV-- 110 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHC--
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcC--
Confidence 46789999999999876421111 00 1345668899999999986 568999999999999999998842100
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNK 201 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 201 (430)
.++++|++.+++||+......... .........++.+..... |+++|+++++ ++
T Consensus 111 --~~gd~vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~------------d~~~l~~~l~---~~ 164 (406)
T 1kmj_A 111 --RAGDNIIISQMEHHANIVPWQMLC---------ARVGAELRVIPLNPDGTL------------QLETLPTLFD---EK 164 (406)
T ss_dssp --CTTCEEEEETTCCGGGTHHHHHHH---------HHHTCEEEEECBCTTSCB------------CGGGHHHHCC---TT
T ss_pred --CCCCEEEEecccchHHHHHHHHHH---------HhCCCEEEEEecCCCCCc------------CHHHHHHHhc---cC
Confidence 156889999999998643211100 001122344444332222 7788888885 47
Q ss_pred eEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccc
Q psy14484 202 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLP 279 (430)
Q Consensus 202 ~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ 279 (430)
+++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+... ...+|++ +++|.++. ..
T Consensus 165 ~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~-~g~~--~~~~~--~~~~d~~~~s~~K~~g~--~G 232 (406)
T 1kmj_A 165 TRLLAITH-VSNVLGTENP----LAEMITLAHQHGAKVLVDGAQA-VMHH--PVDVQ--ALDCDFYVFSGHKLYGP--TG 232 (406)
T ss_dssp EEEEEEES-BCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHH--HHTCSEEEEEGGGTTSC--TT
T ss_pred CeEEEEeC-CCccccCcCC----HHHHHHHHHHcCCEEEEEchhh-cCCC--CCccc--ccCCCEEEEEchhccCC--CC
Confidence 89999999 9999998877 9999999999999999999997 3332 11222 2246776 58898854 23
Q ss_pred cEEEEEcHHHHHhhhccCCccc------c---------cccCCCCCCHHHHHHHH-HHHHHHhh---cCHHHHHHHHHHH
Q psy14484 280 LSLVMTTDKIYNSIYYKNNINI------F---------LHSHSYSGNPLACCAAL-ATLEIFNK---DNILQRISQDMKK 340 (430)
Q Consensus 280 ig~~~~~~~~~~~~~~~~~~~~------~---------~~~~t~~~~~~~~~aa~-~~l~~~~~---~~~~~~~~~~~~~ 340 (430)
+|++++++++++.+........ . ....+.+.+++.+.++. ++++.+++ +...++++++.++
T Consensus 233 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 1kmj_A 233 IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_dssp CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 8999999998887654100000 0 00111233445555444 67776653 3456677778888
Q ss_pred HHHHHHchhcCCCeeeEee--cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------------CCEEEEeC
Q psy14484 341 ITKALTSLITHPKIINFRQ--KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------------GNTVYLMP 405 (430)
Q Consensus 341 l~~~l~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------------~~~lR~~~ 405 (430)
+.+.|+++ +.+....+ .|.++.+.+. . . . ..++.+.|.++||.+.++ .+++|+++
T Consensus 313 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~-~-~---~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~ 382 (406)
T 1kmj_A 313 ALSQLESV---PDLTLYGPQNRLGVIAFNLG-K-H---H--AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASL 382 (406)
T ss_dssp HHHHHTTS---TTEEEESCTTCCSEEEEEET-T-C---C--HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEEC
T ss_pred HHHHHhcC---CCeEEecCCCcCCEEEEEEC-C-C---C--HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEe
Confidence 88888765 33333334 6788888764 2 1 1 356888999999998864 27899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+..+|++++++++++|+++++.+
T Consensus 383 ~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 383 AMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999988754
No 95
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=1.7e-27 Score=231.01 Aligned_cols=332 Identities=15% Similarity=0.137 Sum_probs=228.7
Q ss_pred CCCEEEecccccccccCCC-CCHHHHHHHHHHHhhcccc---cc-CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEHV---ML-SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
||++|+||.++ .++|+ .+|++.+++.+++...... +. .....+...++++.+++.++. .+.+++ ++|+++
T Consensus 44 ~g~~~i~~~~~---~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~-~sG~~a 118 (401)
T 2bwn_A 44 GKQDITVWCGN---DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVF-SSAYNA 118 (401)
T ss_dssp CEEEEEECSCS---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEE-SCHHHH
T ss_pred CCCcEEEeeCC---CcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEE-CCcHHH
Confidence 78999999885 33454 3789999999998774321 11 123456788999999999973 455555 667779
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
+..++.++.... +++.|++.++.|++.... .... ......++.+
T Consensus 119 ~~~~~~~l~~~~------~gd~Vl~~~~~~~~~~~~-~~~~------------g~~~~~v~~~----------------- 162 (401)
T 2bwn_A 119 NDATLSTLRVLF------PGLIIYSDSLNHASMIEG-IKRN------------AGPKRIFRHN----------------- 162 (401)
T ss_dssp HHHHHHHHHHHS------TTCEEEEETTCCHHHHHH-HHHS------------CCCEEEECTT-----------------
T ss_pred HHHHHHHHhcCC------CCCEEEECchhhHHHHHH-HHHc------------CCeEEEEcCC-----------------
Confidence 988888754321 456788777766554322 2111 2233444432
Q ss_pred HHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-C-CCCcccccccccCCC-
Q psy14484 187 AIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-G-CGRTGKFFACEHAEI- 262 (430)
Q Consensus 187 d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g-~g~~g~~~~~~~~~~- 262 (430)
|+++|++++++.. +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+ | ++..|..+. ...++
T Consensus 163 d~~~le~~l~~~~~~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~~ 236 (401)
T 2bwn_A 163 DVAHLRELIAADDPAAPKLIAFES-VYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA-ERDGLM 236 (401)
T ss_dssp CHHHHHHHHHHSCTTSCEEEEEES-BCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-HHHTCG
T ss_pred CHHHHHHHHHhhccCCceEEEEec-CcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-eccCcc
Confidence 6788888887653 4788999999 9999998877 9999999999999999999998 3 444554332 33333
Q ss_pred -CCc--eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHH
Q psy14484 263 -WPD--FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQ 336 (430)
Q Consensus 263 -~~d--~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~ 336 (430)
.+| +.++||+++. +-|++++++++.+.+... ...+ ..+.+.++++++++.++++.++. ++..+++++
T Consensus 237 ~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~--~~~~--~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 309 (401)
T 2bwn_A 237 HRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSY--APGF--IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQM 309 (401)
T ss_dssp GGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHH--CHHH--HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred ccCcEEEeechhhccC---CCCEEecCHHHHHHHHHh--CcCc--eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 234 4489999984 227888898887776530 1111 11223456778888888887754 356788888
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-------C-CEEEEeCCC
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-------G-NTVYLMPPY 407 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-------~-~~lR~~~~~ 407 (430)
+.+++.+.|+++ ..... .+.+.++++.+. .. ..+.++++.|+ ++||.+.++ + +++|++++.
T Consensus 310 ~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~-~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~ 379 (401)
T 2bwn_A 310 HAKVLKMRLKAL-GMPII---DHGSHIVPVVIG-DP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSP 379 (401)
T ss_dssp HHHHHHHHHHHH-TCCBC---CCSSSCEEEECC-CH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCT
T ss_pred HHHHHHHHHHHC-CCccc---CCCCCeEEEEeC-Ch-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeC
Confidence 999999999876 33322 234557777665 31 11467888886 789999764 1 489999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~ 427 (430)
.++++++++++++|++++++
T Consensus 380 ~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 380 VHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp TSCHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999988765
No 96
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.96 E-value=8.2e-29 Score=241.20 Aligned_cols=345 Identities=10% Similarity=0.006 Sum_probs=224.1
Q ss_pred CCCEEEecccccccccCCCC--CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc-CC-----CCCeEEE--cC
Q psy14484 32 SGKRYLDAISSWWVNLFGHS--NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT-QY-----KLGHCFY--GS 101 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~-----~~~~v~~--~~ 101 (430)
+|+.++||..|....+.|+. +|.+.+++.+++...... ..+.+.....++++.+++.+ +. .+++|++ |+
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~ 106 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLN-HEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSL 106 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCC-CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEE
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhc-cCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECC
Confidence 46789999998654555553 589999998887321111 00112222345555555554 21 4689999 99
Q ss_pred CchHHHHHHHHHHHHhhhhcCCCCC-----cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC-eeEeCCC--CCCC
Q psy14484 102 DGASAVEVALKMSFHYWYNKGFLNK-----KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK-TYIITTP--DSRN 173 (430)
Q Consensus 102 sgteA~~~al~~~~~~~~~~g~~~~-----~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~ 173 (430)
||++|++.+++++.... ++ +.|++..++||++.......+. . ...++.. +.+.
T Consensus 107 gg~~a~~~~~~~~~~~~------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~ 167 (412)
T 1ajs_A 107 GGTGALRIGAEFLARWY------NGTNNKDTPVYVSSPTWENHNGVFTTAGF-------------KDIRSYRYWDTEKRG 167 (412)
T ss_dssp HHHHHHHHHHHHHHHHS------SSSSCCCSCEEEEESCCTHHHHHHHHTTC-------------SCEEEEECEETTTTE
T ss_pred CcHHHHHHHHHHHHHhC------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC-------------ceeEEEeeecCCCCc
Confidence 99999999987654332 44 7899999999987654443222 2 2333331 2222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc-
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG- 252 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g- 252 (430)
. |+++|++.+++++.++.++++.. ++|++| ..++.+++++|.++|++||+++|+||+|+++++.|
T Consensus 168 ~------------d~~~l~~~l~~~~~~~~~v~~~~-p~nptG-~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~ 233 (412)
T 1ajs_A 168 L------------DLQGFLSDLENAPEFSIFVLHAC-AHNPTG-TDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233 (412)
T ss_dssp E------------CHHHHHHHHHHSCTTCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCH
T ss_pred c------------CHHHHHHHHHhCCCCcEEEEECC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcc
Confidence 2 78999999986544667776666 778888 56788999999999999999999999999998765
Q ss_pred --cccccccCCCCCc----eeeeecccCC-CccccEEEEE---cHHHHHhhhccCCcccccccCCCC-CCHHHHHHHHHH
Q psy14484 253 --KFFACEHAEIWPD----FLCLSKGITG-GYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYS-GNPLACCAALAT 321 (430)
Q Consensus 253 --~~~~~~~~~~~~d----~~~~sK~l~g-G~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~-~~~~~~~aa~~~ 321 (430)
....+..+...+| +.++||.++. | +|+|++++ ++++++.+.. .... .+..++. .+++++.++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~a~~~~ 309 (412)
T 1ajs_A 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLS--QMQK-IVRVTWSNPPAQGARIVART 309 (412)
T ss_dssp HHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHH--HHHH-HHHTTTSSCCSHHHHHHHHH
T ss_pred cccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHH--HHHH-HHhcccCCCChHHHHHHHHH
Confidence 3223322211233 4589999988 7 79999999 7874443221 0000 1234454 588888888888
Q ss_pred HHHHh--------hcCHHHHHHHHHHHHHHHHHchhcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCc
Q psy14484 322 LEIFN--------KDNILQRISQDMKKITKALTSLITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNEL 392 (430)
Q Consensus 322 l~~~~--------~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv 392 (430)
|+..+ .++..++++++.+++.+.|+++. .+ .+....+.+.++.+.-. + ...+.+.+.++||
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gv 379 (412)
T 1ajs_A 310 LSDPELFHEWTGNVKTMADRILSMRSELRARLEALK-TPGTWNHITDQIGMFSFTGL-N--------PKQVEYLINQKHI 379 (412)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CSSCCHHHHHCCSSEEECCC-C--------HHHHHHHHHTTCE
T ss_pred HcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCeeEEcCCCceEEEeCC-C--------HHHHHHHHHhCCE
Confidence 86431 14456677778888888887652 11 12222333434333211 1 2345555668899
Q ss_pred EEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 393 LLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 393 ~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.++ +|++++. .+++++++++++|+++++++
T Consensus 380 ~v~~~---~Ris~~~-~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 380 YLLPS---GRINMCG-LTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp ECCTT---SEEEGGG-CCTTTHHHHHHHHHHHHHHC
T ss_pred EecCC---cEEEeee-CCHHHHHHHHHHHHHHHHhc
Confidence 99875 5998773 58999999999999998764
No 97
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.96 E-value=7.2e-29 Score=238.51 Aligned_cols=297 Identities=13% Similarity=0.098 Sum_probs=210.4
Q ss_pred HHHHHHHHHHhhc-CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 78 PVIKLSEKLSSLT-QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 78 ~~~~l~~~l~~~~-~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
...++++.+++.+ +.+++++++++||++|++.+++++.. +++.|++.+++|++........+.
T Consensus 64 g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~--------~gd~Vl~~~~~~~~~~~~~~~~g~-------- 127 (375)
T 3op7_A 64 GSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIE--------PGDHVISLYPTYQQLYDIPKSLGA-------- 127 (375)
T ss_dssp CCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCC--------TTCEEEEEESSCTHHHHHHHHTTC--------
T ss_pred ChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcC--------CCCEEEEeCCCchhHHHHHHHcCC--------
Confidence 3457788888876 45778999999999999999998754 668899999999986544332221
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
....++.+..... ..|+++|+++++ +++++|++++ ++|++| ..++.+++++|.++|++||
T Consensus 128 -----~~~~v~~~~~~~~----------~~d~~~l~~~l~---~~~~~v~~~~-~~nptG-~~~~~~~l~~i~~la~~~~ 187 (375)
T 3op7_A 128 -----EVDLWQIEEENGW----------LPDLEKLRQLIR---PTTKMICINN-ANNPTG-AVMDRTYLEELVEIASEVG 187 (375)
T ss_dssp -----EEEEEEEEGGGTT----------EECHHHHHHHCC---TTCCEEEEES-SCTTTC-CCCCHHHHHHHHHHHHTTT
T ss_pred -----EEEEEeccccCCC----------CCCHHHHHHhhc---cCCeEEEEcC-CCCCCC-CCCCHHHHHHHHHHHHHcC
Confidence 2233333211000 017899999885 4678888888 999999 5567888999999999999
Q ss_pred CEEEEeccccCCCCcccccccccCCCCCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHH
Q psy14484 237 IHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLAC 315 (430)
Q Consensus 237 i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 315 (430)
+++|+||+|+++++.+.....+..+..+++.+|||.++ +| +|+|++++++++++.+.. .....+++.+++++
T Consensus 188 ~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~------~~~~~~~~~~~~~~ 260 (375)
T 3op7_A 188 AYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPG-IRIGWVAANHQVTDILRD------YRDYTMICAGVFDD 260 (375)
T ss_dssp CEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGG-GCCEEEECCHHHHHHHTT------TGGGTTSCCCHHHH
T ss_pred CEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcc-cceEEEEeCHHHHHHHHH------HHhhhccCCCcHHH
Confidence 99999999998866533333344555577889999998 56 799999999999888875 33556777888888
Q ss_pred HHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecc-eEEEEEEeecCCccchhHHHHHHHHH-HHCC
Q psy14484 316 CAALATLEIFNK--DNILQRISQDMKKITKALTSLITHPKIINFRQKG-MIWAFDVIIEDPEQIETFSKKFFVAA-LKNE 391 (430)
Q Consensus 316 ~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~a~~~~~~l-~~~G 391 (430)
+++.++|+..+. +...++++++.+++.+.|++ .+.+....+.| .+.++.+. ... . ..++++.| .++|
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~-~~~--~---~~~~~~~ll~~~g 331 (375)
T 3op7_A 261 LVAQLALAHYQEILERNRHILEENLAILDQWIEE---EPLVSYIRPAVVSTSFVKIA-VDM--P---MEDFCLQLLQEHG 331 (375)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH---CTTEEECCCSSSSCEEEEEC-CSS--C---HHHHHHHHHHHHC
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCCeEEEeEEcC-CCC--C---HHHHHHHHHHhCC
Confidence 888887764321 22334445556666666654 35544444444 34444444 321 1 35677777 5789
Q ss_pred cEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 392 LLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 392 v~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|.+.|+ .+++|++++ .+++++++++++|+++++++
T Consensus 332 i~v~~g~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 332 VLLVPGNRFERDGYVRLGFA--CEQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp EECEEGGGGTCTTEEEECCC--SCHHHHHHHHHHHHHHHGGG
T ss_pred EEEeChhhhCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 999886 378999654 56699999999999998764
No 98
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.96 E-value=1.5e-27 Score=231.95 Aligned_cols=348 Identities=12% Similarity=0.054 Sum_probs=227.2
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCC-CeEEEcCCchHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKL-GHCFYGSDGASAV 107 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~sgteA~ 107 (430)
+..++||..+. ..++ .+|+|.+++.+++..... +....+..++.+.+++.+.+.++ ..+ ++|++++||++|+
T Consensus 22 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~ 98 (410)
T 3e2y_A 22 DPSVVNLGQGF--PDIS-PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL 98 (410)
T ss_dssp STTSEECSSCC--CCSC-CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 35678888773 3344 579999999999875321 11112234566677777766554 345 7999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 108 EVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 108 ~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
+.+++++.. +++.|++..++|+++.......+. ....++.+.............+ ..|
T Consensus 99 ~~~~~~~~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~g~~~~~~~~-~~d 156 (410)
T 3e2y_A 99 FNSIQGLVD--------PGDEVIIMVPFYDCYEPMVRMAGA-------------VPVFIPLRSKPTDGMKWTSSDW-TFD 156 (410)
T ss_dssp HHHHHHHCC--------TTCEEEEEESCCTTHHHHHHHTTC-------------EEEEEECEECCCCSSCCBGGGE-ECC
T ss_pred HHHHHHhcC--------CCCEEEEeCCCchhhHHHHHHcCC-------------EEEEEeccccccccccccccCC-cCC
Confidence 999998754 567899999999987544333222 1122222100000000000000 017
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-ccccCC----C
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-ACEHAE----I 262 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~~~----~ 262 (430)
+++++++++ .++++|++++ ++|++|. .++++.+++|.++|++||+++|+||+|+++.+.|... .+.... .
T Consensus 157 ~~~l~~~~~---~~~~~v~~~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 231 (410)
T 3e2y_A 157 PRELESKFS---SKTKAIILNT-PHNPLGK-VYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231 (410)
T ss_dssp HHHHHTTCC---TTEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred HHHHHhhcC---CCceEEEEeC-CCCCCCc-CcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence 888888774 4788888888 9999995 5577889999999999999999999999887766422 222222 2
Q ss_pred CCceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH-----hhcC----HHH
Q psy14484 263 WPDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-----NKDN----ILQ 332 (430)
Q Consensus 263 ~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-----~~~~----~~~ 332 (430)
..++.++||.++ .| +|+|++++++++++.+.. .....+++.+++++.++.++|+.. .... ..+
T Consensus 232 ~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 304 (410)
T 3e2y_A 232 TITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQT------VQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPK 304 (410)
T ss_dssp EEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHH------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred EEEEecchhhcCCCC-ceEEEEEECHHHHHHHHH------HHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence 234557899998 56 799999999999887765 345567888999998888888631 1123 334
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCcc-c-----hhHHHHHHHHH-HHCCcEEeec--------
Q psy14484 333 RISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ-I-----ETFSKKFFVAA-LKNELLLRPI-------- 397 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-~-----~~~a~~~~~~l-~~~Gv~~~~~-------- 397 (430)
+++++.+++.+.|+++ +.....+..|.++++.+. ..... . .....++++.+ .++||.+.|+
T Consensus 305 ~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~ 380 (410)
T 3e2y_A 305 ELEVKRDRMVRLLNSV---GLKPIVPDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKS 380 (410)
T ss_dssp HHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECG-GGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTT
T ss_pred HHHHHHHHHHHHHHHC---CCeecCCCccEEEEEEch-hhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCC
Confidence 5555666666666554 222223445666666665 31110 0 00123566665 4669999874
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 398 ----GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 398 ----~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.+++||+++ .++++|++++++|++
T Consensus 381 ~~~~~~~iRis~~--~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 381 KPHFEKLVRFCFI--KKDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHHTTEEEEECC--CCHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEEEc--CCHHHHHHHHHHHHh
Confidence 268999755 599999999999875
No 99
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.96 E-value=4.3e-29 Score=241.66 Aligned_cols=342 Identities=9% Similarity=-0.036 Sum_probs=220.7
Q ss_pred CCCEEEecccccccccCC--CCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcCCCCCeEEE--cCCchH
Q psy14484 32 SGKRYLDAISSWWVNLFG--HSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY--GSDGAS 105 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~--~~sgte 105 (430)
.+..++||..|.+.++.+ +.+|.+.+++.+++..... +.......++.+.+++.+... +.++++|++ ++||++
T Consensus 24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~v~~~~~~g~~~ 102 (394)
T 2ay1_A 24 PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSETTATLATVGGTG 102 (394)
T ss_dssp CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGGGEEEEEEEHHHH
T ss_pred CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcccEEEEecCCchh
Confidence 456789999986655555 5689999999988765211 111112223444444444222 115678999 999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 183 (430)
|++.++++++... ++++|++..++||++.......+. ....++.+ +.+..
T Consensus 103 a~~~~~~~~~~~~------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------- 154 (394)
T 2ay1_A 103 ALRQALELARMAN------PDLRVFVSDPTWPNHVSIMNFMGL-------------PVQTYRYFDAETRGV--------- 154 (394)
T ss_dssp HHHHHHHHHHHHC------TTCCEEEEESCCHHHHHHHHHHTC-------------CEEEEECEETTTTEE---------
T ss_pred HHHHHHHHHHhcC------CCCEEEEcCCCChhHHHHHHHcCC-------------ceEEEecccccCCcc---------
Confidence 9999999877542 457899999999987554433222 22333332 11221
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc--cccccccC-
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG--KFFACEHA- 260 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g--~~~~~~~~- 260 (430)
|++++++.+++.+.+++++++.. ++|++| ..++.+.+++|.++|++||+++|+||+|+++++.| ....+..+
T Consensus 155 ---d~~~l~~~l~~~~~~~~~~~~~~-~~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 229 (394)
T 2ay1_A 155 ---DFEGMKADLAAAKKGDMVLLHGC-CHNPTG-ANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIA 229 (394)
T ss_dssp ---CHHHHHHHHHTCCTTCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHh
Confidence 78999999986433467777777 888888 46778899999999999999999999999887653 11122211
Q ss_pred CCCCc---eeeeecccC-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--------
Q psy14484 261 EIWPD---FLCLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-------- 325 (430)
Q Consensus 261 ~~~~d---~~~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-------- 325 (430)
...++ +.++||.++ +| +|+|++++ ++++++.+... ........+..++++++.++.++|+..
T Consensus 230 ~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~ 306 (394)
T 2ay1_A 230 SRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGA--MAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMA 306 (394)
T ss_dssp HHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHH--HHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHH
T ss_pred hcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHH--HHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHH
Confidence 11234 337899998 57 79999998 66654433220 000111222334788888888877633
Q ss_pred hhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEe
Q psy14484 326 NKDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLM 404 (430)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~ 404 (430)
..+...++++++.+++.+.|+++.....+....+. |.++++.+. ...+.+.+.++||.+.++ +|++
T Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~l~~~gi~v~~~---~Ris 373 (394)
T 2ay1_A 307 ELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------PEQVKRIKEEFGIYMVGD---SRIN 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT---CEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC----------HHHHHHHHHhCCEEecCC---CeEE
Confidence 12345566777777887877765210011112233 555544333 135666777889999864 5999
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q psy14484 405 PPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~ 424 (430)
++ .++++++++++++|+++
T Consensus 374 ~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 374 IA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp GG-GCCTTTHHHHHHHHHHH
T ss_pred ee-cCCHhhHHHHHHHHHHc
Confidence 88 57999999999999875
No 100
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.96 E-value=2.6e-28 Score=240.43 Aligned_cols=341 Identities=10% Similarity=0.036 Sum_probs=225.7
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCC-CCHHHHHHHHHHHhhc----CCCCCeEEEcCCch
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNL-THKPVIKLSEKLSSLT----QYKLGHCFYGSDGA 104 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~-~~~~~~~l~~~l~~~~----~~~~~~v~~~~sgt 104 (430)
.+|+++|||.+| ...+. .+|+|++++.+++.+.... ....| ......++++.+++++ +..+++|++++|++
T Consensus 66 ~~~~~~i~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~ 142 (449)
T 3qgu_A 66 NPDAKIISLGIG--DTTEP-LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK 142 (449)
T ss_dssp CTTCCCEECSSC--CCCCC-CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHH
T ss_pred CCCCCEEEeeCC--CCCCC-CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHH
Confidence 368899999987 33444 6899999999998864321 11122 2233456666666665 56778999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++..+ ..+.. +++.|++.+++|+++............++. ....+...++.+......
T Consensus 143 ~al~~~-~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~---~~~~~~~~~~~~~~~~~~--------- 201 (449)
T 3qgu_A 143 CDIARI-QMMFG--------SKPTVAVQDPSYPVYVDTSVMMGMTGDHNG---TGFDGIEYMVCNPDNHFF--------- 201 (449)
T ss_dssp HHHHHH-HHHHC--------SSSCEEEEESCCTHHHHHHHHHTCSCCBCS---SSBTTEEEEECCGGGTTC---------
T ss_pred HHHHHH-HHHhC--------CCCEEEEcCCCChhHHHHHHHcCCcccccc---cccceeEEEecccccCCc---------
Confidence 999988 54443 678899999999998655444332210000 000113344433211110
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccC---
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHA--- 260 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~--- 260 (430)
.+++ +. .++++|+++. ++|++| ..++.+.+++|.++|++||+++|+||+|+++.+.|. ...+..+
T Consensus 202 -~~~~-------~~-~~~~~v~l~~-p~NPtG-~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 270 (449)
T 3qgu_A 202 -PDLS-------KA-KRTDIIFFCS-PNNPTG-AAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA 270 (449)
T ss_dssp -CCGG-------GC-CCCSEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG
T ss_pred -CChh-------Hc-CCCCEEEEeC-CCCCCC-CcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC
Confidence 0221 11 3566777777 888888 556788899999999999999999999998876653 1222222
Q ss_pred -CCCCceeeeecccC-CCccccEEEEEcHHHHH--------hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh---h
Q psy14484 261 -EIWPDFLCLSKGIT-GGYLPLSLVMTTDKIYN--------SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN---K 327 (430)
Q Consensus 261 -~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~---~ 327 (430)
+....+.+|||.++ .| +|+|++++++++++ .+.. .....+++.+++++.++.++|+... .
T Consensus 271 ~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 343 (449)
T 3qgu_A 271 DEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNR------VMTTCFNGASNIVQAGGLACLQPEGLKEM 343 (449)
T ss_dssp GGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHH------HHHHSCCCCCHHHHHHHHHHTSHHHHHHH
T ss_pred CCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHH------HhhcccCCCCHHHHHHHHHHHhhcCHHHH
Confidence 22344668999998 57 89999999988765 2322 2234455778899988888876411 2
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-------C
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-------G 398 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-------~ 398 (430)
++..++++++.+++.+.|+++ .. ....+ .|.++++.+. . . . +.++++.|+++ ||.+.|+ .
T Consensus 344 ~~~~~~~~~~~~~l~~~L~~~-g~---~~~~~~~~~~~~~~~~-~-~--~---~~~~~~~l~~~~gI~v~pg~~f~~~~~ 412 (449)
T 3qgu_A 344 NAMIKFYKENAQILKTTFTEM-GF---SVYGGDDAPYIWVGFP-G-K--P---SWDVFAEILERCNIVTTPGSGYGPAGE 412 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TC---CEEESSSSSEEEEECT-T-S--C---HHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CC---eeeCCCCeeEEEEECC-C-C--C---HHHHHHHHHHHCCEEEecchHhCCCCC
Confidence 455677788888888888765 22 22333 3666666553 2 1 1 35788888776 9999874 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+++||+ +..++++|++++++|+++++
T Consensus 413 ~~iRis--~~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 413 GFVRAS--AFGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp TEEEEE--CCSCHHHHHHHHHHHHHHHC
T ss_pred CeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence 789997 45699999999999999875
No 101
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.96 E-value=8.5e-29 Score=239.73 Aligned_cols=340 Identities=9% Similarity=-0.032 Sum_probs=214.7
Q ss_pred ECCCCEEEecccccccccCC--CCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc---C---CCCCeEEE--
Q psy14484 30 DVSGKRYLDAISSWWVNLFG--HSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT---Q---YKLGHCFY-- 99 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~---~~~~~v~~-- 99 (430)
+..+..++||.+|.+.++.| +.+|++.+++.+++...... .+.......++++.+++.+ . .++++|++
T Consensus 22 ~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~ 99 (396)
T 2q7w_A 22 ADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTK--NYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQ 99 (396)
T ss_dssp ------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCC--CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred ccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCccccc--CCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEe
Confidence 33567899999997655666 46799999999887653111 1112222334444444443 1 13678998
Q ss_pred cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCC
Q psy14484 100 GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKG 177 (430)
Q Consensus 100 ~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 177 (430)
++||++|++.++++++... +++.|++.+++||++.......+. ....++.. +.+..
T Consensus 100 ~~g~~~a~~~~~~~~~~~~------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--- 157 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKNT------SVKRVWVSNPSWPNHKSVFNSAGL-------------EVREYAYYDAENHTL--- 157 (396)
T ss_dssp ESHHHHHHHHHHHHHHHHS------CCCEEEEEESCCTHHHHHHHHTTC-------------EEEEEECEETTTTEE---
T ss_pred cccchhhHHHHHHHHHHhC------CCCEEEEcCCCchhHHHHHHHcCC-------------ceEEEecccCCCCCc---
Confidence 9999999999998776432 567899999999997654443222 22333331 11221
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc--ccc
Q psy14484 178 NSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG--KFF 255 (430)
Q Consensus 178 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g--~~~ 255 (430)
|+++|++.+++.+.+++++++.. ++|++| ..++.+++++|.++|++||+++|+||+|+++.+.+ ...
T Consensus 158 ---------d~~~l~~~l~~~~~~~~~v~~~~-p~nptG-~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 226 (396)
T 2q7w_A 158 ---------DFDALINSLNEAQAGDVVLFHGC-CHNPTG-IDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAE 226 (396)
T ss_dssp ---------CHHHHHHHHTTCCTTCEEEEECS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTH
T ss_pred ---------CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhH
Confidence 78999999975433467777677 888888 46778899999999999999999999999887653 222
Q ss_pred ccccCCCCCc----eeeeecccC-CCccccEEEEE---cHH----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH
Q psy14484 256 ACEHAEIWPD----FLCLSKGIT-GGYLPLSLVMT---TDK----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323 (430)
Q Consensus 256 ~~~~~~~~~d----~~~~sK~l~-gG~~~ig~~~~---~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 323 (430)
.+..+...+| +.++||.++ .| +|+|++++ +++ +.+.+.. .....+...+++++.++.++|+
T Consensus 227 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~ 299 (396)
T 2q7w_A 227 GLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKA------AIRANYSNPPAHGASVVATILS 299 (396)
T ss_dssp HHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHH------HHHTTTSSCCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHH------HHhhccCCCCcHHHHHHHHHhc
Confidence 2221111122 447899998 57 79999997 553 4433332 1122233448888888877775
Q ss_pred HH-------h-hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEE
Q psy14484 324 IF-------N-KDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLL 394 (430)
Q Consensus 324 ~~-------~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~ 394 (430)
.. + .+...++++++.+++.+.|+++..-..+....+. |.++++.+. ...+.+.+.++||.+
T Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v 369 (396)
T 2q7w_A 300 NDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----------KEQVLRLREEFGVYA 369 (396)
T ss_dssp SHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC----------HHHHHHHHHHHCEEC
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC----------HHHHHHHHHhcCeee
Confidence 32 0 1234456677777777777765200012222233 444333322 134666677889999
Q ss_pred eecCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 395 RPIGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 395 ~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.++ +|++++. .+++++++++++|++++
T Consensus 370 ~~~---~Ris~~~-~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 370 VAS---GRVNVAG-MTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CTT---CEEEGGG-CCTTTHHHHHHHHHHHC
T ss_pred cCC---ceEEEee-cCHHHHHHHHHHHHhcC
Confidence 864 6999884 49999999999998753
No 102
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.96 E-value=7.3e-28 Score=234.94 Aligned_cols=340 Identities=7% Similarity=0.021 Sum_probs=226.5
Q ss_pred CCEEEecccccccc---cCCCCCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhcCCCCC---eEEEcCCchH
Q psy14484 33 GKRYLDAISSWWVN---LFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLTQYKLG---HCFYGSDGAS 105 (430)
Q Consensus 33 g~~~lD~~~~~~~~---~lG~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~v~~~~sgte 105 (430)
|..++||..|.... .+. .+|.+.+++.+...... .+....+..++++.+++.+.+.. +++ +|++|+||++
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~--~~~~~~~i~~t~g~~~ 113 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLV-FLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNF--RPEGHIRSIATAGGTG 113 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBC-CCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGG--CCSSEEEEEEESHHHH
T ss_pred CCCeEECCCCcccCCCCCcc-ccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhccc--CccccccEEECCchHH
Confidence 45678887763311 222 46778888766443221 12222234456677777776655 355 9999999999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIA 184 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 184 (430)
|+..+++.+.. +++.|++.+++|+++.......+. ....++.. .++..
T Consensus 114 al~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~---------- 162 (418)
T 3rq1_A 114 GIHHLIHNYTE--------PGDEVLTADWYWGAYRVICSDTGR-------------TLVTYSLFDEHNNF---------- 162 (418)
T ss_dssp HHHHHHHHHSC--------TTCEEEEESSCCTHHHHHHHHTTC-------------EEEEECSBCTTSSB----------
T ss_pred HHHHHHHHhcC--------CCCEEEECCCCchhHHHHHHHcCC-------------EEEEEeeeCCCCCc----------
Confidence 99999998754 568899999999887544333222 22344432 22222
Q ss_pred HHHHHHHHHHHHhC--CCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHH------hcCCEEEEeccccCCCCccc--
Q psy14484 185 RCAIFDLEILLKKN--HNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICN------NYNIHLIADEIAVGCGRTGK-- 253 (430)
Q Consensus 185 ~~d~~~le~~l~~~--~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~------~~gi~li~DEv~~g~g~~g~-- 253 (430)
|+++|+++++++ ++..++++++. + +|++| ..++.+.+++|.++|+ +||+++|+||+|.+|++.+.
T Consensus 163 --d~~~l~~~l~~~~~~~~~~~vi~~~-p~~NPtG-~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~ 238 (418)
T 3rq1_A 163 --NHEAFQNRVNELAAKQTNVVVIFNT-PGNNPTG-YSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEV 238 (418)
T ss_dssp --CHHHHHHHHHHHHHHCSEEEEEEEC-SSCTTTC-CCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHH
T ss_pred --CHHHHHHHHHHhhccCCCEEEEEeC-CCCCCCC-CCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHH
Confidence 789999988753 13344666665 5 89999 5566777999999999 89999999999999987664
Q ss_pred -ccccccCCCCCc---ee--eeecccCC-CccccEEEEE---cHHHHHhhhccCCccccc-ccCCCCCCHHHHHHHHHHH
Q psy14484 254 -FFACEHAEIWPD---FL--CLSKGITG-GYLPLSLVMT---TDKIYNSIYYKNNINIFL-HSHSYSGNPLACCAALATL 322 (430)
Q Consensus 254 -~~~~~~~~~~~d---~~--~~sK~l~g-G~~~ig~~~~---~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~~~aa~~~l 322 (430)
.+.....++.++ ++ +|||.++. | +|+|++++ ++++++.+.. ..... .+.+...+.+++.++.++|
T Consensus 239 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~l 314 (418)
T 3rq1_A 239 RAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFE---VNKSTSRATWSNICRPAMRTMANIV 314 (418)
T ss_dssp HGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHH---HHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHH---HHHHHHhhccCCCchHHHHHHHHHh
Confidence 222233445555 22 79999974 6 89999999 8888887764 01111 1122356777777777766
Q ss_pred HHH------hh--cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCccchhHHHHHHHHHHHCCcE
Q psy14484 323 EIF------NK--DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQIETFSKKFFVAALKNELL 393 (430)
Q Consensus 323 ~~~------~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~a~~~~~~l~~~Gv~ 393 (430)
+.. .+ ....++++++.+++.+.|+++ ..+. ..+.+.++.+ .+. + +.++++.|.++||.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gi~ 381 (418)
T 3rq1_A 315 ADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPM---LPYRGGFFITIPTD-S--------ANAICEELKKEHIY 381 (418)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCC---CCCCSSSEEEEECT-T--------HHHHHHHHHHTTEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC---CCCCceEEEEcCCC-C--------HHHHHHHHHhCCEE
Confidence 421 11 234456677777777777765 3322 2344444433 332 1 35788889999999
Q ss_pred EeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 394 LRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 394 ~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.|+++++||+++ .++++++++++++|+++++++
T Consensus 382 v~~g~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 382 VIALANGIRIAAC-GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp CEECSSEEEEEGG-GSCHHHHTTHHHHHHHHHHHT
T ss_pred EecCCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999865 579999999999999999865
No 103
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=7.4e-28 Score=229.23 Aligned_cols=320 Identities=11% Similarity=0.050 Sum_probs=216.8
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
++++.+|++++||.++ .++++ .+|++.+++.+++.... .++.....++++++++.++.+++++++|+|+++|
T Consensus 8 ~~~~~~g~~~id~~~~--~~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 8 EGITPLSSEIVNFSTT--VWTDG-DKDHLEKHLVENLNCIR-----HYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAA 79 (350)
T ss_dssp --------CCEECSCC--SCCCS-CCHHHHHHHHHTGGGGG-----SCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHH
T ss_pred hHhhhccccEEEccCC--CCCCC-CCHHHHHHHHHhHhHHh-----cCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHH
Confidence 6899999999999988 45676 78999999998874322 2233323578888999888778899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIAR 185 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 185 (430)
+..+++++. ++.|++.+++|+++.......+ .....++. +.....
T Consensus 80 l~~~~~~l~----------gd~Vi~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~----------- 125 (350)
T 3fkd_A 80 FYQIAQAFR----------GSRSLIAIPSFAEYEDACRMYE-------------HEVCFYPSNEDIGEA----------- 125 (350)
T ss_dssp HHHHHHHTT----------TCEEEEEESCCHHHHHHHHHTT-------------CEEEEEETTSCGGGS-----------
T ss_pred HHHHHHHHC----------CCEEEEeCCCcHHHHHHHHHcC-------------CeEEEEecCCccccC-----------
Confidence 999988763 4689999999988754333322 22334444 211000
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc--cccCCCC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA--CEHAEIW 263 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~--~~~~~~~ 263 (430)
+ .+++++++++. ++|++|.+.+ .+.+++|.+.|+++ ++|+||+|+++...+.... .+..+..
T Consensus 126 -~-----------~~~~~~v~i~~-p~nptG~~~~-~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~ 189 (350)
T 3fkd_A 126 -D-----------FSNMDFCWLCN-PNNPDGRLLQ-RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNL 189 (350)
T ss_dssp -C-----------CTTCSEEEEES-SCTTTCCCCC-HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSE
T ss_pred -c-----------cCCCCEEEEeC-CCCCcCCCCC-HHHHHHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCE
Confidence 1 13566677777 8888996655 44455666655544 9999999998876654221 1222222
Q ss_pred CceeeeecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHH
Q psy14484 264 PDFLCLSKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKI 341 (430)
Q Consensus 264 ~d~~~~sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l 341 (430)
..+.+|||.++ .| +++|++++++++.+.+.. ...+++.+++++.++.++|+..+ -.+..++..++.+++
T Consensus 190 i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 260 (350)
T 3fkd_A 190 VMVYSFSHAYGIPG-LRIGYIVANKDFMKRVAA--------FSTPWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDF 260 (350)
T ss_dssp EEEEESHHHHSCGG-GCCEEEECCHHHHHHHHT--------TCCTTCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHH
T ss_pred EEEecCchhccCcc-hheEeEEeCHHHHHHHHH--------hCCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 33457899998 56 799999999999988876 33466788998888888887433 112223333666777
Q ss_pred HHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHH-CCcEEeec-------CCEEEEeCCCCCCHHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTVYLMPPYILNKNE 413 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~lR~~~~~~~t~e~ 413 (430)
.+.|+++ +.+...++.|.++++.+. .. . +.++.+.|.+ +||.+.++ .+++|++++ ++++
T Consensus 261 ~~~L~~~---~~~~~~~~~~~~~~~~~~-~~---~---~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~ 327 (350)
T 3fkd_A 261 ITALNRL---DGVEVHPSGTTFFLLRLK-KG---T---AAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQ 327 (350)
T ss_dssp HHHHHHS---TTEEECCCSSSEEEEEES-SS---C---HHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHH
T ss_pred HHHHhcC---CCcEECCCCCcEEEEECC-CC---C---HHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHH
Confidence 7777654 555555677888877776 42 1 3679999998 89999875 368999866 8899
Q ss_pred HHHHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQTFN 426 (430)
Q Consensus 414 i~~~~~~l~~~l~ 426 (430)
+++++++|++.+.
T Consensus 328 ~~~l~~al~~~~~ 340 (350)
T 3fkd_A 328 NQLFIKALETFLE 340 (350)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 104
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.96 E-value=1.6e-27 Score=229.95 Aligned_cols=337 Identities=12% Similarity=0.064 Sum_probs=226.3
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccc-cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH-VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVE 108 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~ 108 (430)
+|..++||..+ ...++ .+|.+.+++.+.+..... +....+..++++.+++.+.+..+ .++++|++|+||++|++
T Consensus 29 ~~~~~i~l~~~--~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~ 105 (385)
T 1b5p_A 29 QGVDLVALTAG--EPDFD-TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALF 105 (385)
T ss_dssp TTCCCEECCCS--SCSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHH
T ss_pred cCCCEEEecCC--CCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHH
Confidence 45678898877 33454 468999999988764221 11112334566777777766554 35679999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARC 186 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 186 (430)
.+++.+.. +++.|++.+++|+++.......+ .....++.+. .+..
T Consensus 106 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~------------ 152 (385)
T 1b5p_A 106 NLFQAILD--------PGDEVIVLSPYWVSYPEMVRFAG-------------GVVVEVETLPEEGFVP------------ 152 (385)
T ss_dssp HHHHHHCC--------TTCEEEEEESCCTHHHHHHHHTT-------------CEEEEEECCGGGTTCC------------
T ss_pred HHHHHhcC--------CCCEEEEcCCCchhHHHHHHHcC-------------CEEEEeecCcccCCCC------------
Confidence 99998754 56889999999987643322211 2223444321 1111
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc-
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD- 265 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d- 265 (430)
|+++|+++++ +++++|++.. ++|++| ...+.+.+++|.++|++||+++|+||+|+.+...|....+..+.-..+
T Consensus 153 d~~~l~~~l~---~~~~~v~~~~-p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i 227 (385)
T 1b5p_A 153 DPERVRRAIT---PRTKALVVNS-PNNPTG-AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTL 227 (385)
T ss_dssp CHHHHHTTCC---TTEEEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEE
T ss_pred CHHHHHHhcC---CCCEEEEEeC-CCCCCC-CCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEE
Confidence 7888888875 4577777766 778888 556778899999999999999999999997755442112221111112
Q ss_pred -eeeeecccCC-CccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH---Hhh--cCHHHHHHHHH
Q psy14484 266 -FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI---FNK--DNILQRISQDM 338 (430)
Q Consensus 266 -~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~---~~~--~~~~~~~~~~~ 338 (430)
+.+|||.++. | +|+|++++++++++.+.. .....+++.+.+++.++.++|+. ... +...++++++.
T Consensus 228 ~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T 1b5p_A 228 TVNGAAKAFAMTG-WRIGYACGPKEVIKAMAS------VSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRR 300 (385)
T ss_dssp EEEESTTTTTCGG-GCCEEEECCHHHHHHHHH------HHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEechhhcCCcc-cceEEEEeCHHHHHHHHH------HHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHH
Confidence 3378999874 6 899999999998887765 22345667788888888777753 211 34456667777
Q ss_pred HHHHHHHHchhcCCCeeeEeecce-EEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHH
Q psy14484 339 KKITKALTSLITHPKIINFRQKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKN 412 (430)
Q Consensus 339 ~~l~~~l~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e 412 (430)
+++.+.|+++ .... ..+.|. ++++.+. ... .. ..++.+.|.++||.+.++ .+++|+++. ++++
T Consensus 301 ~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~-~~~--~~--~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~ 369 (385)
T 1b5p_A 301 DLLLEGLTAL-GLKA---VRPSGAFYVLMDTS-PIA--PD--EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEE 369 (385)
T ss_dssp HHHHHHHHHH-TCCB---CCCSBTTEEEEECT-TTC--SS--HHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHH
T ss_pred HHHHHHHHHC-CCee---cCCCeeEEEEEecC-CCC--CC--HHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHH
Confidence 7787887765 3222 223344 4444443 211 11 367889999999999885 368999866 7999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQTFNE 427 (430)
Q Consensus 413 ~i~~~~~~l~~~l~~ 427 (430)
++++++++|++++++
T Consensus 370 ~i~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 370 NLRKALERFARVLGR 384 (385)
T ss_dssp HHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999877653
No 105
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.96 E-value=4.1e-27 Score=230.13 Aligned_cols=306 Identities=12% Similarity=0.053 Sum_probs=213.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCC---------CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhh
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKL---------GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA 143 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~---------~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~ 143 (430)
.+..++++++++.+.+.++... ++|++|+|+++|+..+++++.. +++.|++.+|+|+++....
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~ 149 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN--------PGDNVLLDEPAYSGTLQSL 149 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC--------TTCEEEEESSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC--------CCCEEEEeCCCcHHHHHHH
Confidence 3445677888888887766443 5899999999999999998864 5688999999999875443
Q ss_pred hccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---------CCeEEEEEccccccC
Q psy14484 144 LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH---------NKIAAIIIEPLVQCA 214 (430)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---------~~~~~vi~ep~v~~~ 214 (430)
...+ .....++.+. .. .|+++|++++++++ .++++++++|.++|+
T Consensus 150 ~~~g-------------~~~~~v~~~~--~~-----------~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NP 203 (425)
T 2r2n_A 150 HPLG-------------CNIINVASDE--SG-----------IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNP 203 (425)
T ss_dssp GGGT-------------CEEEEECEET--TE-----------ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTT
T ss_pred HHcC-------------CEEEEeCcCC--CC-----------CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCC
Confidence 3221 1222333221 11 17899999997432 357788776547888
Q ss_pred CCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccc----cccccCCCCCceeeeecccCCCccccEEEEEcHHHH
Q psy14484 215 GGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF----FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIY 290 (430)
Q Consensus 215 ~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~----~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~ 290 (430)
+|. ..+.+.+++|.++|++||+++|+||+|+++.+.|.. ..++..+....+.+|||.++.| +|+|+++++++++
T Consensus 204 tG~-~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~ 281 (425)
T 2r2n_A 204 TGN-SLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLI 281 (425)
T ss_dssp TCC-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHH
T ss_pred CCC-cCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHH
Confidence 884 567888999999999999999999999977555532 1222222234456899999877 8999999999998
Q ss_pred HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-------cCHHHHHHHHHHHHHHHHHchhcCCCe-e-eEeecc
Q psy14484 291 NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK-------DNILQRISQDMKKITKALTSLITHPKI-I-NFRQKG 361 (430)
Q Consensus 291 ~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-------~~~~~~~~~~~~~l~~~l~~l~~~~~~-~-~~~~~g 361 (430)
+.+.. .....+++.+++++.++.++|+.+.+ +...++++++.+++.+.|++. .+.+ . ..+..|
T Consensus 282 ~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~p~~g 353 (425)
T 2r2n_A 282 ERVIL------HIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW--LTGLAEWHVPAAG 353 (425)
T ss_dssp HHHHH------HHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CSSSEEECCCSBS
T ss_pred HHHHH------HHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCeEEeCCCce
Confidence 87765 33455678899999888888875322 123344455555555665542 2332 1 224456
Q ss_pred eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 362 MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.++++.+. .... . ...+.+.|.++||.+.|+ .+++|++++. .+++++++++++|++++.++
T Consensus 354 ~~~~~~~~-~~~~-~---~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 354 MFLWIKVK-GIND-V---KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp SEEEEEET-TCSC-C---HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeC-CCCC-H---HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence 77777776 4221 1 123577888999999874 2689998773 69999999999999998765
No 106
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=6.5e-27 Score=228.11 Aligned_cols=343 Identities=10% Similarity=0.070 Sum_probs=231.6
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc---ccCCCC---CHHHHHHHHHHHhhcCC-CCCeEEEcCCch
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV---MLSNLT---HKPVIKLSEKLSSLTQY-KLGHCFYGSDGA 104 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~---~~~~~~l~~~l~~~~~~-~~~~v~~~~sgt 104 (430)
+|+.+++|..+. .++.+|++.+++.+++...... ....+. .+...++++.+++.++. +++++++++||+
T Consensus 25 ~g~~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t 100 (420)
T 1t3i_A 25 NGHPLVYLDNAA----TSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNAT 100 (420)
T ss_dssp TTEECEECBTTT----CCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHH
T ss_pred CCCceEEecCCc----cCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChH
Confidence 566788877653 2467899999999988763211 011121 35567899999999976 568999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+|++.++++++... . .++++|++.+++||+......... .........++.+..+..
T Consensus 101 ~a~~~~~~~~~~~~-~---~~gd~Vl~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~---------- 157 (420)
T 1t3i_A 101 EAINLVAYSWGMNN-L---KAGDEIITTVMEHHSNLVPWQMVA---------AKTGAVLKFVQLDEQESF---------- 157 (420)
T ss_dssp HHHHHHHHHTHHHH-C---CTTCEEEEETTCCGGGTHHHHHHH---------HHHCCEEEEECBCTTSSB----------
T ss_pred HHHHHHHHHhhhcc-c---CCCCEEEECcchhHHHHHHHHHHH---------HhcCcEEEEeccCCCCCc----------
Confidence 99999999884210 0 156789999999998531110000 001122344544432222
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCC
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~ 264 (430)
|+++|+++++ +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+ ++... +....+ .+
T Consensus 158 --d~~~l~~~l~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~ 222 (420)
T 1t3i_A 158 --DLEHFKTLLS---EKTKLVTVVH-ISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS-APHYP--LDVQLI--DC 222 (420)
T ss_dssp --CHHHHHHHCC---TTEEEEEEES-BCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC--CCHHHH--TC
T ss_pred --CHHHHHHhhC---CCceEEEEeC-CcccccCcCC----HHHHHHHHHHcCCEEEEEhhhc-cCCcc--Cchhhc--CC
Confidence 7899999885 4789999999 9999998877 9999999999999999999997 43321 122222 36
Q ss_pred ceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcccc--------------cccCCCCCCHHHHHHHHH-HHHHHhh
Q psy14484 265 DFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIF--------------LHSHSYSGNPLACCAALA-TLEIFNK 327 (430)
Q Consensus 265 d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~--------------~~~~t~~~~~~~~~aa~~-~l~~~~~ 327 (430)
|++++| |.+++ .++|++++++++++.+......... ....+.+.+++.+.++.. +++.+++
T Consensus 223 di~~~s~sK~~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (420)
T 1t3i_A 223 DWLVASGHKMCAP--TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTD 300 (420)
T ss_dssp SEEEEEGGGTTSC--TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCC--CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHH
Confidence 877665 96544 3489999999988877541000000 000112344555554443 6776644
Q ss_pred ---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEe------ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-
Q psy14484 328 ---DNILQRISQDMKKITKALTSLITHPKIINFR------QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI- 397 (430)
Q Consensus 328 ---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~- 397 (430)
+...++++++.+++.+.|+++ +.+.... +.|.++.+.+. . . . ..++.+.|.++||.+.++
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~-~-~---~--~~~~~~~l~~~gi~v~~~~ 370 (420)
T 1t3i_A 301 LGMENIHNYEVELTHYLWQGLGQI---PQLRLYGPNPKHGDRAALASFNVA-G-L---H--ASDVATMVDQDGIAIRSGH 370 (420)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTC---TTEEEESCCGGGSCBCSEEEEEET-T-B---C--HHHHHHHHHTTTEECBCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCccccccCCEEEEEEC-C-C---C--HHHHHHHHHHCCeEEeecc
Confidence 456677788888888888765 3332222 24788888765 3 1 1 356888999999999876
Q ss_pred ------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ------------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++|++++..++++++++++++|+++++++
T Consensus 371 ~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 371 HCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp TTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4689999998899999999999999998764
No 107
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=8.4e-27 Score=224.73 Aligned_cols=333 Identities=14% Similarity=0.081 Sum_probs=233.1
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC-CCeEEEcCCchHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA~~~al~ 112 (430)
+.|+|..+ -++.+|++.+++.+++.. ++. ....+..+++++.+++.++.+ .+++++++||++|+..+++
T Consensus 20 ~~~l~~~~------~~~~~~~v~~a~~~~~~~--~~~--~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~ 89 (386)
T 2dr1_A 20 KYKLFTAG------PVACFPEVLEIMKVQMFS--HRS--KEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIR 89 (386)
T ss_dssp CSEECCSS------SCCCCHHHHHHTTSCCCC--TTS--HHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHH
T ss_pred cceeecCC------CcCCcHHHHHHHhccccc--ccC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHH
Confidence 46777643 245688999888776432 110 112467789999999998765 5679999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCc--chhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGE--TLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++.. +++.|++.+++||+. ...... . ....+.++.+..+.. |+++
T Consensus 90 ~l~~--------~gd~vl~~~~~~~~~~~~~~~~~-~------------g~~~~~v~~~~~~~~------------d~~~ 136 (386)
T 2dr1_A 90 NGVS--------KGGKVLVTIIGAFGKRYKEVVES-N------------GRKAVVLEYEPGKAV------------KPED 136 (386)
T ss_dssp HHSC--------TTCEEEEEESSHHHHHHHHHHHH-T------------TCEEEEEECCTTCCC------------CHHH
T ss_pred Hhhc--------CCCeEEEEcCCchhHHHHHHHHH-h------------CCceEEEecCCCCCC------------CHHH
Confidence 8753 568899999999873 221111 1 122344444332222 8899
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 270 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s 270 (430)
|++++++. +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+.+ ... .... ...+|++++|
T Consensus 137 l~~~l~~~-~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~~--~~~~--~~~~di~~~s 205 (386)
T 2dr1_A 137 LDDALRKN-PDVEAVTITY-NETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAMG-GAD--IKFD--KWGLDVVFSS 205 (386)
T ss_dssp HHHHHHHC-TTCCEEEEES-EETTTTEECC----HHHHHHHHHHTTCEEEEECTTTBT-TBC--CCTT--TTTCSEEEEE
T ss_pred HHHHHhcC-CCCcEEEEEe-ecCCcchhCC----HHHHHHHHHHcCCeEEEEcccccc-Ccc--cccc--ccCCcEEEEe
Confidence 99999652 4678888888 9999998876 999999999999999999999733 221 1222 2346887666
Q ss_pred --cccCCCccccEEEEEcHHHHHhhhccCCc----------ccc--cccCCCCCCHHHHHHHHHHHHHHhhc----CHHH
Q psy14484 271 --KGITGGYLPLSLVMTTDKIYNSIYYKNNI----------NIF--LHSHSYSGNPLACCAALATLEIFNKD----NILQ 332 (430)
Q Consensus 271 --K~l~gG~~~ig~~~~~~~~~~~~~~~~~~----------~~~--~~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~ 332 (430)
|.++++ .++|++++++++++.+...... ... ....+++.++++++++.++|+.+.+. +..+
T Consensus 206 ~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~ 284 (386)
T 2dr1_A 206 SQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLE 284 (386)
T ss_dssp TTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999876 3689999999987766320000 001 12345567888888888888876543 5667
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCC
Q psy14484 333 RISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPP 406 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~ 406 (430)
+++++.+++.+.|+++ ........ ...+.++++.+. .+.. ..++.+.|.++||.+.++ ++++|++++
T Consensus 285 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~ 357 (386)
T 2dr1_A 285 MYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTP-PGIK-----GDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM 357 (386)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECC-TTCC-----HHHHHHHHHHTTEECEECCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcC-CCCC-----HHHHHHHHHHCCeEEecCccccCCCEEEEECC
Confidence 7888888888888875 33322110 114677777765 3211 367999999999999875 379999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..++++++++++++|+++++++
T Consensus 358 ~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 358 GYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHc
Confidence 8899999999999999998764
No 108
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.96 E-value=2.6e-28 Score=238.51 Aligned_cols=304 Identities=13% Similarity=0.083 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHH--HHHHHHHHhhhhcCCCC--------CcEEEEEcCCCCCcchhhhcc
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVE--VALKMSFHYWYNKGFLN--------KKKFICLQNSYHGETLGALAV 146 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~--~al~~~~~~~~~~g~~~--------~~~vl~~~~~yhg~~~~~~~~ 146 (430)
....++++.+++.+++++++|++|+|+++|+. .+++++.... ++ ++.|++.+++|+++.......
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~-----~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 144 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGV-----RGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL 144 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCC-----TTCSSCGGGGCCEEEEEESCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccC-----CCccccccCCCCEEEEcCCCcHHHHHHHHHc
Confidence 34568888888888878889999999999997 8888766410 13 589999999999875443332
Q ss_pred CCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHH
Q psy14484 147 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLK 226 (430)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~ 226 (430)
+. ....++.... . .|+++|++++++ ..++++|+++|.++|++| ...+.+.++
T Consensus 145 g~-------------~~~~v~~~~~--g-----------~d~~~l~~~l~~-~~~~~~v~~~~~~~NPtG-~~~~~~~l~ 196 (423)
T 3ez1_A 145 GF-------------ELLTVDMQSD--G-----------PDVDAVERLAGT-DPSVKGILFVPTYSNPGG-ETISLEKAR 196 (423)
T ss_dssp TC-------------EEEEEEEETT--E-----------ECHHHHHHHHHS-CTTEEEEEECSSSCTTTC-CCCCHHHHH
T ss_pred CC-------------EEEeccCCCC--C-----------CCHHHHHHHHhh-CCCceEEEECCCCCCCCC-cCCCHHHHH
Confidence 22 2223332211 1 188999999963 257888888764788888 556667799
Q ss_pred HHHHHH-HhcCCEEEEeccccCCCCcc---c----cccc----ccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhh
Q psy14484 227 LVREIC-NNYNIHLIADEIAVGCGRTG---K----FFAC----EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIY 294 (430)
Q Consensus 227 ~l~~l~-~~~gi~li~DEv~~g~g~~g---~----~~~~----~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~ 294 (430)
+|.++| ++||+++|+||+|+.+...+ . .+.+ +..+....+.+|||.+.+| +|+|++++++++++.+.
T Consensus 197 ~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~ 275 (423)
T 3ez1_A 197 RLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLS 275 (423)
T ss_dssp HHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHH
Confidence 999999 99999999999998432222 1 1111 1223334466899986667 79999999999988876
Q ss_pred ccCCcccccccCCCCCCHHHHHHHHHHHHH-Hh---h--cCHHHHHHHHHHHHHHHHHc-hhcCC-Ceee-EeecceEEE
Q psy14484 295 YKNNINIFLHSHSYSGNPLACCAALATLEI-FN---K--DNILQRISQDMKKITKALTS-LITHP-KIIN-FRQKGMIWA 365 (430)
Q Consensus 295 ~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-~~---~--~~~~~~~~~~~~~l~~~l~~-l~~~~-~~~~-~~~~g~~~~ 365 (430)
. .....+++.+++++.++.++++. .. . ....+.++++.+.+.+.|.+ +...+ .+.. .+..|++++
T Consensus 276 ~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~ 349 (423)
T 3ez1_A 276 K------YLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFIS 349 (423)
T ss_dssp H------HHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEE
T ss_pred H------HHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEE
Confidence 5 34556778888888888777764 11 0 12223334444555555543 23333 2222 234577788
Q ss_pred EEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 366 FDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 366 ~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+. .. . ...+.+.|.++||.+.++ .+++||+++.. +++++++++++|++++.++
T Consensus 350 ~~~~-~~---~---~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 350 LDTA-EP---V---ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp EEES-SS---C---HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EECC-CC---c---HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHH
Confidence 8776 42 1 357888899999999882 26899998755 9999999999999998764
No 109
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.96 E-value=3.8e-27 Score=229.69 Aligned_cols=348 Identities=11% Similarity=0.019 Sum_probs=224.9
Q ss_pred CCEEEecccccccc-cCCCCCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhh------c--CCCCCeEEEcC
Q psy14484 33 GKRYLDAISSWWVN-LFGHSNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSL------T--QYKLGHCFYGS 101 (430)
Q Consensus 33 g~~~lD~~~~~~~~-~lG~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~------~--~~~~~~v~~~~ 101 (430)
++.++||..+.... +-...+|++.+++.+++..... +.......++.+.+++.+.+. . +.++++|++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~ 111 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS 111 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence 35789998885432 1224789999999998865321 111112334555566655521 1 14678999999
Q ss_pred CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC--CCCCCCCC
Q psy14484 102 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNS 179 (430)
Q Consensus 102 sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 179 (430)
||++|++.+++++.. +++.|++.+++||++.......+. ....++.+.. +.
T Consensus 112 g~~~al~~~~~~l~~--------~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~------ 164 (416)
T 1bw0_A 112 GGSHGILMAITAICD--------AGDYALVPQPGFPHYETVCKAYGI-------------GMHFYNCRPENDWE------ 164 (416)
T ss_dssp HHHHHHHHHHHHHCC--------TTCEEEEEESCCTHHHHHHHHTTC-------------EEEEEEEEGGGTTE------
T ss_pred ChHHHHHHHHHHhCC--------CCCEEEEcCCCcHhHHHHHHHcCc-------------EEEEeecCcccCCC------
Confidence 999999999998753 568899999999987543332221 1223332111 11
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc----cc
Q psy14484 180 ANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK----FF 255 (430)
Q Consensus 180 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~----~~ 255 (430)
.|+++|+++++ ++++++++.. ++|++|. .++++++++|.++|++||+++|+||+|+++.+.|. .+
T Consensus 165 ------~d~~~l~~~l~---~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 233 (416)
T 1bw0_A 165 ------ADLDEIRRLKD---DKTKLLIVTN-PSNPCGS-NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF 233 (416)
T ss_dssp ------ECHHHHHHHCC---TTEEEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCC
T ss_pred ------CCHHHHHHHhc---cCCeEEEEeC-CCCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCc
Confidence 17899998885 3566666666 6778885 56789999999999999999999999998765553 21
Q ss_pred -ccccCCCCCc---eeeeecccCC-CccccEEEEEcHH--HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh-
Q psy14484 256 -ACEHAEIWPD---FLCLSKGITG-GYLPLSLVMTTDK--IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK- 327 (430)
Q Consensus 256 -~~~~~~~~~d---~~~~sK~l~g-G~~~ig~~~~~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~- 327 (430)
.+..++..++ +.++||.++. | +|+|+++++++ +++.+... .+. ....+++.++++++++.++|+....
T Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~ 309 (416)
T 1bw0_A 234 TSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEG--LKR-VGMLVCGPCTVVQAALGEALLNTPQE 309 (416)
T ss_dssp CCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHH--HHH-HHHHHTCSCHHHHHHHHHHHHSSCHH
T ss_pred cCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHH--HHH-HhccccCCCcHHHHHHHHHHhcccHH
Confidence 2222222222 3478999764 6 79999998763 44433310 000 1224567788988888888873211
Q ss_pred --cCHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec-----C
Q psy14484 328 --DNILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI-----G 398 (430)
Q Consensus 328 --~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~-----~ 398 (430)
++..++++++.+++.+.|+++ +++....+ .|.++++.+. .........+..+++.|+ ++||.+.++ .
T Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~ 385 (416)
T 1bw0_A 310 HLDQIVAKIEESAMYLYNHIGEC---IGLAPTMPRGAMYLMSRID-LEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAP 385 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS---TTEEECCCCBTTEEEEEEC-GGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCeeEEEEEeCC-HHHcCCCCCHHHHHHHHHHHCCEEEecccccCCC
Confidence 334556677777777777654 44433333 4667776665 311000001356888875 789999885 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++|+++. .+++++++++++|.+++++.
T Consensus 386 ~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 386 GFTRLTTT--RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp TEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 68999874 78999999999999998764
No 110
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.96 E-value=2.6e-27 Score=230.64 Aligned_cols=340 Identities=10% Similarity=0.000 Sum_probs=221.2
Q ss_pred CCEEEecccccccccCCC--CCHHHHHHHHHHHhhcc-ccccCCCCCHHHHHHHHHHHhhc-CCCCCeEEEcCCchHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGH--SNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEKLSSLT-QYKLGHCFYGSDGASAVE 108 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~sgteA~~ 108 (430)
|+.++||..|.....-|+ .+|.+.+++.+...... .+....+..++++++++++.+.. +...+++++|+||++|+.
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~ 115 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIR 115 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHH
Confidence 567899888754332233 46678888766332211 12222344566777877776665 212239999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHHHHH
Q psy14484 109 VALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIARCA 187 (430)
Q Consensus 109 ~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 187 (430)
.+++.+.. +++.|++.+++|+++.......+ .....++. +.++.. |
T Consensus 116 ~~~~~~~~--------~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------d 162 (413)
T 3t18_A 116 SAIFSYLD--------EGDPLICHDYYWAPYRKICEEFG-------------RNFKTFEFFTDDFAF------------N 162 (413)
T ss_dssp HHHHHHCC--------SSCEEEEESSCCTHHHHHHHHHT-------------CEEEEECCBCTTSSB------------C
T ss_pred HHHHHhcC--------CCCEEEECCCCcccHHHHHHHhC-------------CeEEEeeccCCCCCc------------C
Confidence 99997754 56889999999987754433322 22344444 222222 7
Q ss_pred HHHHHHHHHhC--CCCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHH------hcCCEEEEeccccCCCCcccc---c
Q psy14484 188 IFDLEILLKKN--HNKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICN------NYNIHLIADEIAVGCGRTGKF---F 255 (430)
Q Consensus 188 ~~~le~~l~~~--~~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~------~~gi~li~DEv~~g~g~~g~~---~ 255 (430)
+++|+++++++ ++..++++++. + +|++| ...+.+.+++|.++|+ +||+++|+||+|.+|++.|.. +
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~-p~~NPtG-~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINS-PGNNPTG-YSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEEC-SSCTTTC-CCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeC-CCCCCCC-CCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 89999988742 12344666665 5 89999 5566777999999999 899999999999999877642 2
Q ss_pred ccccCCCCCce--e---eeecccC-CCccccEEEEE---cHHHHHhhhccCCccccc-ccCCCCCCHHHHHHHHHHHHHH
Q psy14484 256 ACEHAEIWPDF--L---CLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFL-HSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 256 ~~~~~~~~~d~--~---~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
.....++.++. + +|||.++ .| +|+|++++ ++++++.+.. ..... .+.+...+.+++.++.++++..
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEA---SLAHSARCNWSNGTHAAQNILIELERAE 316 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHH---HHHHHHHHHTSSCCHHHHHHHHHTTSHH
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHH---HHHHhhhccccCCChHHHHHHHHHhcCh
Confidence 22233444552 2 7899998 57 89999998 8998887764 00111 1122346778777777766432
Q ss_pred h-------hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE-EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec
Q psy14484 326 N-------KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMI-WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 397 (430)
Q Consensus 326 ~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~ 397 (430)
+ .+...++++++.+++.+.|+++ ... ...+.|.+ +++... + +.++++.|.++||.+.|+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~---~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gv~v~~g 383 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLT---MIPYFGGFFTFIPTD-K--------AFDIVKDLEKENIFTIPS 383 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC---CBCCCSSSCEEEECS-C--------HHHHHHHHHHTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC---ccCCCceEEEEeCCC-C--------HHHHHHHHHhCCEEEecC
Confidence 1 1234556677777777777665 222 23344544 333332 1 357888899999999999
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++|++++.. +++++ +++|.++++++
T Consensus 384 ~~~iRis~~~~-~~~~~---l~~l~~~l~~~ 410 (413)
T 3t18_A 384 AKGIRVAICGV-GEEKI---PKLVQRLAFYT 410 (413)
T ss_dssp SSEEEECTTTS-CGGGH---HHHHHHHHHHH
T ss_pred CCceEEEEeeC-CHHHH---HHHHHHHHHHH
Confidence 99999988844 44555 77777777664
No 111
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=5e-27 Score=222.17 Aligned_cols=315 Identities=10% Similarity=0.060 Sum_probs=223.9
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
+.+++|||.++ .+++| .+|.+.+++.+.+.... .++.+...++++.+++.++..++++++++|+++++..++
T Consensus 14 ~~~~~i~l~~n--~~~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~ 85 (337)
T 3p1t_A 14 AAAQAVCLAFN--ENPEA-VEPRVQAAIAAAAARIN-----RYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 85 (337)
T ss_dssp CCCCCEECSSC--CCCSC-CCHHHHHHHHHHGGGTT-----SCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHH
T ss_pred CCCCceEeeCC--CCCCC-CCHHHHHHHHHhhhhhc-----cCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHH
Confidence 45678999988 56787 68999999998876532 345667789999999999877889999999999999998
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+++ +++.|++.+++|+++....... ......++.+.++.. |++++
T Consensus 86 ~~~----------~gd~vl~~~p~~~~~~~~~~~~-------------g~~~~~v~~~~~~~~------------d~~~l 130 (337)
T 3p1t_A 86 AEF----------SSMRFVTAWPGFDGYRARIAVS-------------GLRHFEIGLTDDLLL------------DPNDL 130 (337)
T ss_dssp HHS----------TTSEEEEESSSCSHHHHHHTTS-------------CCEEEEECBCTTSSB------------CHHHH
T ss_pred Hhc----------CCCeEEEeCCCcHHHHHHHHHc-------------CCEEEEecCCCCCCC------------CHHHH
Confidence 875 2468999999998764432221 122334444332222 77777
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeec
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSK 271 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK 271 (430)
+++ .+++++++.. ++|++|.+.+ ++++.++|+++++ +|+||+|.+|+..+.. .....+....+.++||
T Consensus 131 ~~~-----~~~~~v~i~~-p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK 198 (337)
T 3p1t_A 131 AQV-----SRDDCVVLAN-PSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSK 198 (337)
T ss_dssp TTC-----CTTEEEEEES-SCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSS
T ss_pred Hhh-----cCCCEEEEeC-CCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCch
Confidence 654 2456777777 8889998887 8889999999997 5669999977544321 1111122223447899
Q ss_pred ccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHchh
Q psy14484 272 GIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTSLI 349 (430)
Q Consensus 272 ~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~l~ 349 (430)
.++ .| +++|++++++++.+.+.. ...+++.+++++.++.++|+..+ .++..+++.++.+++.+.|+++
T Consensus 199 ~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 268 (337)
T 3p1t_A 199 SYGLAG-LRLGALFGPSELIAAMKR--------KQWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL- 268 (337)
T ss_dssp TTCCTT-TCCEEEECCHHHHHHHHT--------TSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hccCcc-hheEEEEeCHHHHHHHHh--------hcCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 997 56 799999999999888875 23456678888887777775322 1334455666667777777665
Q ss_pred cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 350 THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 350 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
. +...++.|.++++... + ...+.+.|.++||.+.++ ++++|++++ +++++++++++|+++
T Consensus 269 g---~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 269 G---YRVASSEANFVLVENA-A--------GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEY 333 (337)
T ss_dssp T---CCBCCCSSSEEEEECT-T--------THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHH
T ss_pred c---CEECCCCCeEEEEEcC-C--------HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHH
Confidence 2 2233556777776654 3 145778888999999986 378999876 899999999999876
Q ss_pred HH
Q psy14484 425 FN 426 (430)
Q Consensus 425 l~ 426 (430)
++
T Consensus 334 ~~ 335 (337)
T 3p1t_A 334 SD 335 (337)
T ss_dssp TC
T ss_pred hh
Confidence 53
No 112
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=3.2e-28 Score=233.43 Aligned_cols=329 Identities=9% Similarity=0.078 Sum_probs=227.2
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhcc---c---cccCCCCCHHHHHHHHH-HHhhcCCCCCeEEEcCCchHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE---H---VMLSNLTHKPVIKLSEK-LSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~---~~~~~~~~~~~~~l~~~-l~~~~~~~~~~v~~~~sgteA 106 (430)
-.|+|+.+ +.++.+|++.+++.+++.... + .....+..+...++++. +++.++.+ ++++++||++|
T Consensus 9 ~i~ld~~~-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a 81 (371)
T 2e7j_A 9 FINIDPLQ-----TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREA 81 (371)
T ss_dssp CEECCHHH-----HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHH
T ss_pred cEEecccc-----cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHH
Confidence 45666532 345678999999999876532 0 01112345667889999 99999754 99999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeC--CCCCCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIIT--TPDSRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 184 (430)
++.+++++.. +++.|++.+++|++....... .+ .....++ .+.....
T Consensus 82 ~~~~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~-~g------------~~~~~v~~~~~~~~~~---------- 130 (371)
T 2e7j_A 82 KFAVMHSLAK--------KDAWVVMDENCHYSSYVAAER-AG------------LNIALVPKTDYPDYAI---------- 130 (371)
T ss_dssp HHHHHHHHCC--------TTCEEEEETTCCHHHHHHHHH-TT------------CEEEEECCCCTTTCCC----------
T ss_pred HHHHHHHHhC--------CCCEEEEccCcchHHHHHHHH-cC------------CeEEEeecccCCCCCc----------
Confidence 9999998853 668999999999987544222 11 2234454 3222222
Q ss_pred HHHHHHHHHHHHhCC--CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC
Q psy14484 185 RCAIFDLEILLKKNH--NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262 (430)
Q Consensus 185 ~~d~~~le~~l~~~~--~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~ 262 (430)
|+++|+++++++. +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+.+ ..+ .....+
T Consensus 131 --d~~~l~~~l~~~~~~~~~~~v~~~~-~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~~-~~~--~~~~~~-- 198 (371)
T 2e7j_A 131 --TPENFAQTIEETKKRGEVVLALITY-PDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAIG-RMP--VSLKEI-- 198 (371)
T ss_dssp --CHHHHHHHHHHHTTTSCEEEEEEES-SCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTBT-TBC--CCHHHH--
T ss_pred --CHHHHHHHHHhhcccCCeEEEEEEC-CCCCCcccCC----HHHHHHHHHHcCCeEEEECccccC-CCC--CChhhc--
Confidence 7899999997531 4688999999 9999998877 899999999999999999999853 222 122222
Q ss_pred CCcee--eeecccCCCccccEEEEEcHHHHHh-hhccCCcccccccC-----CCCCCHHHHHHHHHHHHHHhhcCHHHHH
Q psy14484 263 WPDFL--CLSKGITGGYLPLSLVMTTDKIYNS-IYYKNNINIFLHSH-----SYSGNPLACCAALATLEIFNKDNILQRI 334 (430)
Q Consensus 263 ~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~-~~~~~~~~~~~~~~-----t~~~~~~~~~aa~~~l~~~~~~~~~~~~ 334 (430)
.+|++ +++|.++++ .++|++++++++++. +... ... ... +++.++..++++.++++.+.. .+.+++
T Consensus 199 ~~di~~~s~sK~~~~~-~~~G~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~ 272 (371)
T 2e7j_A 199 GADFIVGSGHKSMAAS-GPIGVMGMKEEWAEIVLRRS--EKY--KNKEVELLGCTARGATIITLMASFPHVRE-RIKRWD 272 (371)
T ss_dssp TCSEEEEEHHHHSSCC-SSCEEEEECTTTTTTTTCBC--SSC--TTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHH
T ss_pred CCCEEEecCCcCCCCC-CCcEEEEEechhhhhhcccc--ccC--cccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHH
Confidence 35666 568999987 499999999988776 6541 000 111 445677777777778877655 566778
Q ss_pred --HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee--------c--CCEEE
Q psy14484 335 --SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP--------I--GNTVY 402 (430)
Q Consensus 335 --~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~--------~--~~~lR 402 (430)
+++.+++.+.|+++ ...........+.++++.+. + +.++.+.|.++||.+.+ + .+.+|
T Consensus 273 ~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iR 342 (371)
T 2e7j_A 273 EEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE-V--------LYEISKKAKGGRFFLYRELKSRKIHGIKPGLTR 342 (371)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-H--------HHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCS
T ss_pred HHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-C--------HHHHHHHHHHCCEEEEeccccccccCCCCCceE
Confidence 88888998888775 32221111114667666553 1 35788888888998765 1 46789
Q ss_pred -EeCCCC-CCHHHHHHHHHHHHHHHHHh
Q psy14484 403 -LMPPYI-LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 -~~~~~~-~t~e~i~~~~~~l~~~l~~~ 428 (430)
++++.. ++++++++++++|+++++++
T Consensus 343 ii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 343 YFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 999887 99999999999999998763
No 113
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=9.1e-27 Score=225.22 Aligned_cols=330 Identities=12% Similarity=0.089 Sum_probs=229.7
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC-eEEEcCCchHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEVA 110 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgteA~~~a 110 (430)
+++.|+|..+. ++.+|++.+++.+++.. ++. ....+..+++++.+++.++.+++ ++++++||++|++.+
T Consensus 32 ~~~~~l~~~~~------~~~~~~v~~a~~~~~~~--~~~--~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~ 101 (393)
T 1vjo_A 32 VPSRLLLGPGP------SNAHPSVLQAMNVSPVG--HLD--PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEAT 101 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHHSSCCCC--TTS--HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHH
T ss_pred CccceeccCCC------CCCCHHHHHHHhccccc--ccC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHH
Confidence 44567775432 35789999998876542 111 11235678899999999987777 899999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCC--cchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHG--ETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (430)
++++.. ++++|++.+++||+ +...... .......++.+..... |+
T Consensus 102 ~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~~-------------~g~~~~~v~~~~~~~~------------d~ 148 (393)
T 1vjo_A 102 IANAVE--------PGDVVLIGVAGYFGNRLVDMAGR-------------YGADVRTISKPWGEVF------------SL 148 (393)
T ss_dssp HHHHCC--------TTCEEEEEESSHHHHHHHHHHHH-------------TTCEEEEEECCTTCCC------------CH
T ss_pred HHhccC--------CCCEEEEEcCChhHHHHHHHHHH-------------cCCceEEEecCCCCCC------------CH
Confidence 998853 56789999999998 3222111 1122344544432222 88
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 268 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~ 268 (430)
++|++++++. ++++|++++ ++|++|.+.+ +++|.++|+++|+++|+||+|+ ++... .......+|+++
T Consensus 149 ~~l~~~l~~~--~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~----~~~~~~~~di~~ 216 (393)
T 1vjo_A 149 EELRTALETH--RPAILALVH-AETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVP----IFLDAWGVDLAY 216 (393)
T ss_dssp HHHHHHHHHH--CCSEEEEES-EETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSC----CCTTTTTCSEEE
T ss_pred HHHHHHHhhC--CceEEEEec-cCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcC----CcccccCccEEE
Confidence 9999999742 567888888 9999998876 8999999999999999999998 65432 222234578886
Q ss_pred ee--cccCCCccccEEEEEcHHHHHhhhcc-CCcccccc------------cCCC-CCCHHHHHHHHHHHHHHhh---cC
Q psy14484 269 LS--KGITGGYLPLSLVMTTDKIYNSIYYK-NNINIFLH------------SHSY-SGNPLACCAALATLEIFNK---DN 329 (430)
Q Consensus 269 ~s--K~l~gG~~~ig~~~~~~~~~~~~~~~-~~~~~~~~------------~~t~-~~~~~~~~aa~~~l~~~~~---~~ 329 (430)
+| |.++++. ++|++++++++++.+... ....++.+ ..++ +.++++++++.++|+.+.+ ++
T Consensus 217 ~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~ 295 (393)
T 1vjo_A 217 SCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLAN 295 (393)
T ss_dssp CCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred EcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHH
Confidence 55 9998874 899999999988776430 00011111 2233 5688888888888887643 35
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEee--cceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEE
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQ--KGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTV 401 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~l 401 (430)
..++++++.+++.+.|+++ ....... .+ .+.++.+.+. .+. . +.++++.|.++ ||.+.++ .+++
T Consensus 296 ~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~-~~~--~---~~~~~~~l~~~~gi~v~~g~~~~~~~~i 367 (393)
T 1vjo_A 296 CWQRHQKNVEYLWERLEDI-GLSLHVE-KEYRLPTLTTVCIP-DGV--D---GKAVARRLLNEHNIEVGGGLGELAGKVW 367 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSC-GGGBCSSEEEEECC-TTC--C---HHHHHHHHHHHHCEECEECCGGGTTTEE
T ss_pred HHHHHHHHHHHHHHHHHHc-CCcccCC-ccccCCcEEEEEcC-CCC--C---HHHHHHHHHhhCCEEEecCccccCCCEE
Confidence 6678888888999988876 3332211 11 2345566554 321 1 36789999988 9999875 3789
Q ss_pred EEeC-CCCCCHHHHHHHHHHHHHHH
Q psy14484 402 YLMP-PYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 402 R~~~-~~~~t~e~i~~~~~~l~~~l 425 (430)
|+++ ++..+++++++++++|++++
T Consensus 368 Ris~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 368 RVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEeCCccCChHHHHHHHHHHHHHHh
Confidence 9995 56678888999999998875
No 114
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.95 E-value=1.3e-27 Score=233.53 Aligned_cols=346 Identities=10% Similarity=0.005 Sum_probs=224.0
Q ss_pred EEeccccccccc-CCCCCHHHHHHHHHHHh--hccccccCCCCCH-HHHHHHHHHHhhcCCCCCeEEEcCCchHHH--HH
Q psy14484 36 YLDAISSWWVNL-FGHSNSYINKALKNQLN--KLEHVMLSNLTHK-PVIKLSEKLSSLTQYKLGHCFYGSDGASAV--EV 109 (430)
Q Consensus 36 ~lD~~~~~~~~~-lG~~~p~v~~a~~~~~~--~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~v~~~~sgteA~--~~ 109 (430)
++||..|..... ++ .+|.+++++.+++. ... ....|+.. ...++++.+++.++.++++|++|+|+++++ ..
T Consensus 34 ~i~l~~g~~~~~~~~-~~~~~~~a~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~ 110 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLD-LSNDLLSLPGGDFRTKDGV--DCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDL 110 (422)
T ss_dssp CEECCCCSCCHHHHH-TTGGGGGCSTTCCBCTTCC--BTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHH
T ss_pred eEeCCCCCCChhhCC-CcHHHHHHHHHHHhhccch--hhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHH
Confidence 678877633111 22 34467776655421 110 11123332 256777788887777888999999999997 56
Q ss_pred HHHHHHHhhhhcCCC-----CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHH
Q psy14484 110 ALKMSFHYWYNKGFL-----NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184 (430)
Q Consensus 110 al~~~~~~~~~~g~~-----~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+++++.... ..|.. .+++|++.+|+|+++.......+. ....++.... .
T Consensus 111 ~~~~l~~~~-~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--g---------- 164 (422)
T 3d6k_A 111 ISWSYTWGN-NDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGF-------------EMINVPMTDE--G---------- 164 (422)
T ss_dssp HHHHHHHCC-TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTC-------------EEEEEEEETT--E----------
T ss_pred HHHHhcCcc-cccccccccCCCCEEEEeCCccHHHHHHHHHcCC-------------EEEecCCCCC--C----------
Confidence 666665310 00000 034799999999988544333221 2223332211 1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH-hcCCEEEEeccccC--CCCccccc-cc---
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN-NYNIHLIADEIAVG--CGRTGKFF-AC--- 257 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~-~~gi~li~DEv~~g--~g~~g~~~-~~--- 257 (430)
.|+++|++++++ .++++|++.|.++|++| ..++.+.+++|.++|+ +||+++|+||+|.. |...+..+ .+
T Consensus 165 -~d~~~l~~~l~~--~~~~~v~~~~~~~NPtG-~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 240 (422)
T 3d6k_A 165 -PDMGVVRELVKD--PQVKGMWTVPVFGNPTG-VTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEF 240 (422)
T ss_dssp -ECHHHHHHHHTS--TTEEEEEECCSSCTTTC-CCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHH
T ss_pred -CCHHHHHHHHhc--CCCeEEEEcCCCCCCCC-CCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhH
Confidence 178999999863 36788886554788888 5678888999999999 99999999999973 65443211 11
Q ss_pred ----ccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----hc
Q psy14484 258 ----EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-----KD 328 (430)
Q Consensus 258 ----~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-----~~ 328 (430)
+..+....+.+|||..+.| +|+|++++++++++.+.. .....+++.+++++.++.++|+... -.
T Consensus 241 ~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 313 (422)
T 3d6k_A 241 AQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYAS------HANVRGIGPNKLNQLAHAQFFGDVAGLKAHML 313 (422)
T ss_dssp HHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH------HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHH
T ss_pred hhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHH------HHHhhcCCCCHHHHHHHHHHHhCcchHHHHHH
Confidence 1233345566899985557 899999999999887765 3344567788898888887775310 11
Q ss_pred CHHHHHHHHHHHHHHHHHch-hcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------
Q psy14484 329 NILQRISQDMKKITKALTSL-ITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------- 397 (430)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------- 397 (430)
...+.++++.+++.+.|++. ...+.+... +..|.++++.+. .. . ...+.+.|.++||.+.++
T Consensus 314 ~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~-~~---~---~~~~~~~l~~~gV~v~~~g~~f~~~~~ 386 (422)
T 3d6k_A 314 KHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVV-PG---T---ASRVVELAKEAGIALTGAGSSFPLHND 386 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEES-TT---C---HHHHHHHHHHTTEECCCTTTTSGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECC-CC---C---HHHHHHHHHHCCeEEEcCccccCCCCC
Confidence 22344455566666666543 333333322 335677777776 42 1 356788899999999882
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
.+++||+++. .+++++++++++|++++.++.
T Consensus 387 ~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 387 PNNENIRLAPSL-PPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp TTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 2589998887 899999999999999988764
No 115
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.95 E-value=9.3e-27 Score=222.08 Aligned_cols=331 Identities=10% Similarity=0.024 Sum_probs=215.8
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~ 114 (430)
.+++|.++ ..|+.+|++.+++.+++..+. ...+..+..+++++++++.++.+++++++++||++|++.+++++
T Consensus 14 ~~i~l~~~----~~~~~~~~v~~a~~~~~~~~~---~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~ 86 (359)
T 1svv_A 14 KPYSFVND----YSVGMHPKILDLMARDNMTQH---AGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLA 86 (359)
T ss_dssp -CEECSCS----CSSCCCHHHHHHHHHHTTCCC---CSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHH
T ss_pred eeEEecCC----CcCCCCHHHHHHHHHHHhhcc---ccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHH
Confidence 46777653 356789999999999876422 23456788899999999999877889999999999999999988
Q ss_pred HHhhhhcCCCCCcEEEEEcCCCCCcchh-hhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHH
Q psy14484 115 FHYWYNKGFLNKKKFICLQNSYHGETLG-ALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 115 ~~~~~~~g~~~~~~vl~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
+. +++.|++.+++|+++... ... ........++.+ ++.. |+++|++
T Consensus 87 ~~--------~gd~vl~~~~~~~~~~~~~~~~------------~~g~~~~~v~~~-~~~~------------d~~~l~~ 133 (359)
T 1svv_A 87 LR--------PWEAVIATQLGHISTHETGAIE------------ATGHKVVTAPCP-DGKL------------RVADIES 133 (359)
T ss_dssp CC--------TTEEEEEETTSHHHHSSTTHHH------------HTTCCEEEECCT-TSCC------------CHHHHHH
T ss_pred hC--------CCCEEEEcccchHHHHHHHHHh------------cCCCeeEEEeCC-CCee------------cHHHHHH
Confidence 64 567899999999876432 111 112233455443 2222 7899999
Q ss_pred HHHhC----CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCC--CCcccccccccCC--CCCc
Q psy14484 194 LLKKN----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC--GRTGKFFACEHAE--IWPD 265 (430)
Q Consensus 194 ~l~~~----~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~--g~~g~~~~~~~~~--~~~d 265 (430)
.+++. +.++++|++++ + +++|.+ .+.+++++|.++|++||+++|+||+|.+| +..+.. ....+ ..+|
T Consensus 134 ~l~~~~~~~~~~~~~v~~~~-~-~ptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d 208 (359)
T 1svv_A 134 ALHENRSEHMVIPKLVYISN-T-TEVGTQ-YTKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLTD 208 (359)
T ss_dssp HHHHSCSTTSCEEEEEEEES-S-CTTSCC-CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCS
T ss_pred HHHHHHhccCCCceEEEEEc-C-CCCcee-cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCC
Confidence 99753 12488998988 7 567854 55799999999999999999999999544 333221 11111 2367
Q ss_pred eeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q psy14484 266 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 345 (430)
Q Consensus 266 ~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l 345 (430)
+++++..-.|+..++|++++++++++.+... ....+.++........+..+.++....++..++++++.+++.+.|
T Consensus 209 ~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L 284 (359)
T 1svv_A 209 MFYIGATKAGGMFGEALIILNDALKPNARHL----IKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL 284 (359)
T ss_dssp EEEEECTTTTCSSCEEEEECSGGGCTTHHHH----HHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccCCCCCceEEEEEcccHHHHHHHH----HhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 7765432224335678899998887665430 001222333232222222222321001345667788888888888
Q ss_pred HchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEee----cCCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 346 TSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRP----IGNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 346 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~----~~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+........ +..+.++++.+. .++.+.|.++ ||.+.+ ..+++|+++++.++++++++++++
T Consensus 285 -~~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 350 (359)
T 1svv_A 285 -EACGIRLAW--PSASNQLFPILE-----------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEV 350 (359)
T ss_dssp -HHTTCCBSS--CCSSSEECBEEE-----------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHH
T ss_pred -ccCCeEEcc--CCccceEEEEcC-----------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHH
Confidence 442332221 223444444433 3688899999 999854 236899999999999999999999
Q ss_pred HHHHHHHh
Q psy14484 421 IFQTFNEV 428 (430)
Q Consensus 421 l~~~l~~~ 428 (430)
|+++++++
T Consensus 351 l~~~~~~~ 358 (359)
T 1svv_A 351 LKRLVAST 358 (359)
T ss_dssp HHHC----
T ss_pred HHHHHhcc
Confidence 99988764
No 116
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.95 E-value=1.9e-26 Score=225.18 Aligned_cols=340 Identities=10% Similarity=0.052 Sum_probs=227.7
Q ss_pred ECCCCEEEecccccccccCCCCCHHHHHHHHHHHh--hccccccC------CCCCHHHHHHHHHHHhhcCCCCCeEEEcC
Q psy14484 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLN--KLEHVMLS------NLTHKPVIKLSEKLSSLTQYKLGHCFYGS 101 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~--~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~v~~~~ 101 (430)
+.++.-|+|+.++ |+.+|++.+++.+++. ........ ....+...++++++++.++.+++++++++
T Consensus 19 ~~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ 92 (423)
T 3lvm_A 19 AMKLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTS 92 (423)
T ss_dssp -CCSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEES
T ss_pred ccCCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 4456788887654 4679999999998876 31100000 11235567899999999987778999999
Q ss_pred CchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChh
Q psy14484 102 DGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSAN 181 (430)
Q Consensus 102 sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (430)
||++|++.++++++.+.. ++++.|++.+++|++.......+. ........++.+.....
T Consensus 93 ggt~a~~~a~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~~~~~~------- 151 (423)
T 3lvm_A 93 GATESDNLAIKGAANFYQ----KKGKHIITSKTEHKAVLDTCRQLE----------REGFEVTYLAPQRNGII------- 151 (423)
T ss_dssp SHHHHHHHHHHHHHHHHT----TTCCEEEEETTSCHHHHHHHHHHH----------HTTCEEEEECCCTTSCC-------
T ss_pred ChHHHHHHHHHHHHHhhc----cCCCEEEECCccchHHHHHHHHHH----------HcCCEEEEeccCCCCcc-------
Confidence 999999999998775320 146789999999987643332210 01122344554432222
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCC
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 261 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~ 261 (430)
|+++|+++++ +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+. +.. ......
T Consensus 152 -----d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~----~~~~~~ 213 (423)
T 3lvm_A 152 -----DLKELEAAMR---DDTILVSIMH-VNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV-GKL----PIDLSQ 213 (423)
T ss_dssp -----CHHHHHHHCC---TTEEEEECCS-BCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT-TTS----CCCTTT
T ss_pred -----CHHHHHHhcC---CCcEEEEEeC-CCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc-CCC----CcChhh
Confidence 7899999885 5789999999 9999998877 99999999999999999999873 221 122233
Q ss_pred CCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcc-cccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHH
Q psy14484 262 IWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNIN-IFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQ 336 (430)
Q Consensus 262 ~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~ 336 (430)
..+|++++| |.+++ .++|+++++++..+.+...-... ......+.+.++.+++++.++++.++. ++..+++++
T Consensus 214 ~~~di~~~s~sK~~g~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 291 (423)
T 3lvm_A 214 LKVDLMSFSGHKIYGP--KGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRG 291 (423)
T ss_dssp SCCSEEEEESTTTTSC--SSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEechHHhcCC--CCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888766 96543 35999999987765554300000 000112334567777777777776544 556677778
Q ss_pred HHHHHHHHHHchhcCCCeeeEee----cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------------
Q psy14484 337 DMKKITKALTSLITHPKIINFRQ----KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------------- 397 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------------- 397 (430)
+.+++.+.|+++ +.+..... .+.++.+.+. .. . ...+.+.|.+ +.+.++
T Consensus 292 ~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~-~~---~---~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~ 359 (423)
T 3lvm_A 292 LRNRLWNGIKDI---EEVYLNGDLEHGAPNILNVSFN-YV---E---GESLIMALKD--LAVSSGSACTSASLEPSYVLR 359 (423)
T ss_dssp HHHHHHHHHTTS---TTEEEESCSTTBCTTEEEEEET-TS---C---HHHHHHHTTT--EECBCCCC-----CCCCHHHH
T ss_pred HHHHHHHHHhcC---CCEEEeCCccccCCCeEEEEeC-CC---C---HHHHHHHHhh--heeccCccccCCCccccHHHH
Confidence 888888888655 33322222 1345555554 21 1 2567777766 655543
Q ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ---------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ---------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|++++..++++++++++++|+++++++
T Consensus 360 ~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~ 399 (423)
T 3lvm_A 360 ALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRL 399 (423)
T ss_dssp HHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3789999999999999999999999998765
No 117
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.95 E-value=6.9e-27 Score=228.15 Aligned_cols=343 Identities=10% Similarity=0.008 Sum_probs=222.2
Q ss_pred CCEEEecccccccccCCCCC--HHHHHHHHHHHhhcc-c-cccCCCCCHHHHHHHHHHHhhcC--CCCC--eEEEcCCch
Q psy14484 33 GKRYLDAISSWWVNLFGHSN--SYINKALKNQLNKLE-H-VMLSNLTHKPVIKLSEKLSSLTQ--YKLG--HCFYGSDGA 104 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~--~~~~--~v~~~~sgt 104 (430)
...++||..|.+..+.|+.+ |.|++++.+++.... . +....+..++++.+++.+..... .+++ +|++|+||+
T Consensus 48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t 127 (420)
T 4f4e_A 48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT 127 (420)
T ss_dssp CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence 45789999987667777765 899999999887622 1 11222334556666666654321 1456 899999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--CCCCCCCCCCChhH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDSRNINKGNSANE 182 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 182 (430)
+|+..++++..... +++.|++.+|+|+++.......+. ....++. +..+..
T Consensus 128 ~al~~~~~~~~~~~------~gd~Vlv~~p~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~-------- 180 (420)
T 4f4e_A 128 GALKIGADFLRTLN------PKAKVAISDPSWENHRALFDMAGF-------------EVVAYPYYDAKTNGV-------- 180 (420)
T ss_dssp HHHHHHHHHHHHHC------TTCCEEEEESCCHHHHHHHHHTTC-------------CEEEEECEETTTTEE--------
T ss_pred HHHHHHHHHHHHhC------CCCEEEEeCCCcHhHHHHHHHcCC-------------eEEEeeeeccccCcc--------
Confidence 99999977544332 667899999999987544433222 2334444 112222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--cccc-cc
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFAC-EH 259 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~~-~~ 259 (430)
|+++|++.++++++++++++++. ++|++| ..++.+.+++|.++|++||+++|+||+|.++.+.+. .... ..
T Consensus 181 ----d~~~l~~~l~~~~~~~~~v~i~~-p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 254 (420)
T 4f4e_A 181 ----NFDGMLAALNGYEPGTIVVLHAC-CHNPTG-VDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLF 254 (420)
T ss_dssp ----CHHHHHHHHTTCCTTCEEEEECS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHH
T ss_pred ----CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHH
Confidence 78999999986656788888888 999999 566788899999999999999999999998876531 1111 11
Q ss_pred CCCCC---ceeeeecccC-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH------h
Q psy14484 260 AEIWP---DFLCLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF------N 326 (430)
Q Consensus 260 ~~~~~---d~~~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~------~ 326 (430)
.+..+ .+.+|||.++ .| +|+|++++ ++++++.+.. .........+.+.+.+++.++.+.++.. +
T Consensus 255 ~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 331 (420)
T 4f4e_A 255 AAANLNVFVSSSFSKSFSLYG-ERVGALSIITDSKDEAARVLS--QLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWV 331 (420)
T ss_dssp HHTTCCEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHH--HHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHH
T ss_pred HhcCCCEEEEEeCCccCcCcC-CCcEEEEEEcCCHHHHHHHHH--HHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHH
Confidence 11222 2347899998 47 89999864 4555443221 0001112344445666666666555421 1
Q ss_pred --hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEE
Q psy14484 327 --KDNILQRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYL 403 (430)
Q Consensus 327 --~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~ 403 (430)
-++..++++++.+++.+.|+++...+.+....+ .|.+.++.+. ...+.+.+.++||.+.+++ |+
T Consensus 332 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~l~~~gI~v~~~~---Ri 398 (420)
T 4f4e_A 332 QELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT----------SAQVDRLREEFGIYAVSTG---RI 398 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTTS---EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC----------HHHHHHHHHhCCEEecCCC---eE
Confidence 134556677778888888876521112222223 3444433332 1456667778899998865 88
Q ss_pred eCCCCCCHHHHHHHHHHHHHHH
Q psy14484 404 MPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 404 ~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+++ ..+++++++++++|++++
T Consensus 399 s~~-~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 399 CVA-ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp EGG-GCCTTTHHHHHHHHHHHH
T ss_pred EEe-cCCHHHHHHHHHHHHHHh
Confidence 876 447778999999998875
No 118
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.95 E-value=7.9e-28 Score=235.38 Aligned_cols=305 Identities=12% Similarity=0.079 Sum_probs=207.9
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEcCCchHHH--HHHHHHHHHhhhhcC------CCCCcEEEEEcCCCCCcchhhhccCCC
Q psy14484 78 PVIKLSEKLSSLTQYKLGHCFYGSDGASAV--EVALKMSFHYWYNKG------FLNKKKFICLQNSYHGETLGALAVTNI 149 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~~~~v~~~~sgteA~--~~al~~~~~~~~~~g------~~~~~~vl~~~~~yhg~~~~~~~~~~~ 149 (430)
...++++.+++.+++++++|++|+|+++++ +.+++++.... .| +.+++.|++.+|+|+++.......+
T Consensus 79 g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~--~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g-- 154 (427)
T 3ppl_A 79 GIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGN--NDSVQPWSKEETVKWICPVPGYDRHFSITERFG-- 154 (427)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCC--TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTT--
T ss_pred CcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccC--CcccccccCCCCCEEEEcCCCcHHHHHHHHHcC--
Confidence 445777888888787889999999999999 57888766411 00 0016889999999998754433322
Q ss_pred ccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHH
Q psy14484 150 QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 229 (430)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~ 229 (430)
...+.++.+.. .. |+++|+++++ ..++++|+++|.++|++| ...+.+.+++|.
T Consensus 155 -----------~~~~~v~~~~~--g~-----------d~~~l~~~l~--~~~~~~v~~~p~~~NPtG-~~~~~~~~~~l~ 207 (427)
T 3ppl_A 155 -----------FEMISVPMNED--GP-----------DMDAVEELVK--NPQVKGMWVVPVFSNPTG-FTVTEDVAKRLS 207 (427)
T ss_dssp -----------CEEEEEEEETT--EE-----------CHHHHHHHTT--STTEEEEEECCSSCTTTC-CCCCHHHHHHHH
T ss_pred -----------CEEEEeCCCCC--CC-----------CHHHHHHHHh--cCCCeEEEECCCCCCCCC-ccCCHHHHHHHH
Confidence 12233333221 11 7899999884 357889988864788888 455666799999
Q ss_pred HHH-HhcCCEEEEeccccCCCCcccc---cc-cc------cCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCC
Q psy14484 230 EIC-NNYNIHLIADEIAVGCGRTGKF---FA-CE------HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN 298 (430)
Q Consensus 230 ~l~-~~~gi~li~DEv~~g~g~~g~~---~~-~~------~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~ 298 (430)
++| ++||+++|+||+|+++.+.+.. .. .. ..+....+.+|||.+++| +|+|++++++++++.+..
T Consensus 208 ~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~~~~~--- 283 (427)
T 3ppl_A 208 AMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRKWYTG--- 283 (427)
T ss_dssp HCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH---
T ss_pred HHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHHHHHH---
Confidence 999 9999999999999984333321 11 11 223345566899996667 799999999999888765
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHH---h--hcCHHHHHHHHHHHHHHHHHc-hhcCCCeee-EeecceEEEEEEeec
Q psy14484 299 INIFLHSHSYSGNPLACCAALATLEIF---N--KDNILQRISQDMKKITKALTS-LITHPKIIN-FRQKGMIWAFDVIIE 371 (430)
Q Consensus 299 ~~~~~~~~t~~~~~~~~~aa~~~l~~~---~--~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~-~~~~g~~~~~~~~~~ 371 (430)
.....+++.+++++.++.++++.. . .....+.++++.+.+.+.|++ +...+.+.. .+..|.++++.+. .
T Consensus 284 ---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~-~ 359 (427)
T 3ppl_A 284 ---HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVV-P 359 (427)
T ss_dssp ---HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECS-T
T ss_pred ---HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECC-c
Confidence 334456777888888777766521 1 122334455555566666544 232222222 2334777777776 4
Q ss_pred CCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 372 DPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
. . +..+.+.|.++||.+.++ .+++||+++.. ++++|++++++|.+++.++
T Consensus 360 ~---~---~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 360 G---T---ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp T---C---HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred c---h---HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHH
Confidence 2 1 357888999999999882 36899988654 9999999999999998764
No 119
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=6.1e-27 Score=225.40 Aligned_cols=338 Identities=13% Similarity=0.054 Sum_probs=223.2
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
.+.|.+++.+.++...++...++|..++..+. .+++++.++++++.. +.++|++||++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~--------------------~~~~~~~l~~~~~~~-~~v~~~~sgt~a 63 (379)
T 3ke3_A 5 LRQDIDPNGLLEYSVVYTDRALNHMSKAFQEV--------------------MNDLLSNLKTVYNAE-AAVIIPGSGTYG 63 (379)
T ss_dssp ---CCSTTSCCCCCSSCCTTSCCTTSHHHHHH--------------------HHHHHHHHHHHHTCS-EEEEEESCHHHH
T ss_pred hhccCCHHHHHHHHHhccCCCCCCCCHHHHHH--------------------HHHHHHHHHHHhCCC-CEEEEcCChhHH
Confidence 47889999999888766666677766655433 335566777777655 689999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC----CCCCCCCChhH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS----RNINKGNSANE 182 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 182 (430)
++++++.+ . ++++||+++++||+.......... ....+...++.+.. +...
T Consensus 64 ~~~~~~~~-~--------~gd~vi~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~g~~~~~~~------- 118 (379)
T 3ke3_A 64 MEAVARQL-T--------IDEDCLIIRNGWFSYRWTQILEKG---------KFAKSSTVLTAERTEDTEAPKP------- 118 (379)
T ss_dssp HHHHHHHH-C--------TTCEEEEEECSHHHHHHHHHHHHH---------CCSSEEEEEECEESSCCSSCCC-------
T ss_pred HHHHHHhC-C--------CCCeEEEEeCCchhHHHHHHHHHh---------CCCCceEEEeccccccccccCC-------
Confidence 99988653 2 567899999999986432222100 00012223333210 0000
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~ 262 (430)
+...|++++++++++ .++++|++.. +++++| ...+.+++++|.++|++||+++|+||+++ | +..+..+.+++
T Consensus 119 ~~~~d~~~l~~~i~~--~~~~~v~~~~-~~~~~G-~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~ 190 (379)
T 3ke3_A 119 FAPVDIETAVAKIKE--DKSAIVYAPH-VETSSG-IILSEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMKELGI 190 (379)
T ss_dssp EECCCHHHHHHHHHH--HTCSEEEEES-EETTTT-EECCHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHHHHTC
T ss_pred CCCCCHHHHHHHHhh--cCCcEEEEEe-ecCCCc-eeCCHHHHHHHHHHHHHcCCEEEEEeccc--C--CccccccccCC
Confidence 000288999999963 2466777877 888888 55567899999999999999999999986 3 23344454555
Q ss_pred CCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccc-----------------cCCCCCCHHHHHHHHHHHHHH
Q psy14484 263 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLH-----------------SHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 263 ~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~-----------------~~t~~~~~~~~~aa~~~l~~~ 325 (430)
...+.+++|+++++ .++|++++++++++.+.. ...+++.. ..+++.++.+++++.++|+.+
T Consensus 191 d~~~~s~~K~l~~~-~g~g~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 191 DVLISAPQKGWSST-PCAGLVMLSAAAIKKVES-TESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp SEEEECTTTTTCSC-CCEEEEEECHHHHHHHHT-CCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CEEEecchhhcCCC-CceEEEEECHHHHHhhhc-CCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 44444556999876 478999999998877654 11112111 112366777777787888877
Q ss_pred hhc---CHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----
Q psy14484 326 NKD---NILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---- 397 (430)
Q Consensus 326 ~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---- 397 (430)
+++ +..++.+++.+++++.|+++ ........ ...+.+..+... . .. ..+.+.|.++||.+.++
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~-~----~~---~~~~~~L~~~Gi~v~~g~~~~ 339 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTE-R----DD---MHKGSAFAEAGLQIAAGVPLK 339 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECS-C----HH---HHSSHHHHHTTCCCEECCCCS
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccC-C----cc---hHHHHHHHHCCeEEeCCcccc
Confidence 653 56677888889999998876 22222111 112233333222 1 11 22367788999988775
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 ------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 ------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
++.+||+++..+|++||++++++|+++++++.
T Consensus 340 ~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 340 VGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999998764
No 120
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=2.6e-26 Score=221.06 Aligned_cols=321 Identities=12% Similarity=0.088 Sum_probs=223.3
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC--CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL--GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
.+|++++++.+++... ......+...++++++++.++... +++++++||++|++ +++.+.. +++.
T Consensus 13 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~--------~gd~ 79 (384)
T 3zrp_A 13 IKEDVLVAGLENNVGF----TSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLK--------PNDK 79 (384)
T ss_dssp CCHHHHHHTTCCSCCT----TSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCC--------TTCE
T ss_pred CCHHHHHHhhcccccc----ccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcC--------CCCE
Confidence 4788888887654321 111224567889999999998777 78999999999999 8876643 6788
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
|++.+++||+........ ........++.+..... |+++|++++++ .++++|+++
T Consensus 80 vi~~~~~~~~~~~~~~~~-----------~~g~~~~~v~~~~~~~~------------d~~~l~~~i~~--~~~~~v~~~ 134 (384)
T 3zrp_A 80 ILVVSNGVFGDRWEQIFK-----------RYPVNVKVLRPSPGDYV------------KPGEVEEEVRK--SEYKLVALT 134 (384)
T ss_dssp EEEECSSHHHHHHHHHHT-----------TSSCEEEEECCSTTCCC------------CHHHHHHHHHH--SCEEEEEEE
T ss_pred EEEecCCcchHHHHHHHH-----------HcCCcEEEecCCCCCCC------------CHHHHHHHHHh--CCCcEEEEe
Confidence 999999998753222110 11123345555433222 88999999984 358999999
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
+ ++|++|...+ +++|.++|++||+++|+||+|+ ++.. ..... ...+|++++| |+++|+ .++|+++++
T Consensus 135 ~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~~~~~-~g~g~~~~~ 203 (384)
T 3zrp_A 135 H-VETSTGVREP----VKDVINKIRKYVELIVVDGVSS-VGAE--EVKAE--EWNVDVYLTASQKALGSA-AGLGLLLLS 203 (384)
T ss_dssp S-EETTTTEECC----HHHHHHHHGGGEEEEEEECTTT-TTTS--CCCTT--TTTCSEEEEETTSTTCCC-SSEEEEEEC
T ss_pred C-CCCCCceECc----HHHHHHHHHhcCCEEEEECccc-ccCc--ccccc--ccCCCEEEecCcccccCC-CceEEEEEC
Confidence 9 9999998877 9999999999999999999987 3221 11122 2346777655 999876 579999999
Q ss_pred HHHHHhh-hccCCc------cccc---------ccCCC-CCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHH
Q psy14484 287 DKIYNSI-YYKNNI------NIFL---------HSHSY-SGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALT 346 (430)
Q Consensus 287 ~~~~~~~-~~~~~~------~~~~---------~~~t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 346 (430)
+++++.+ ...... ..+. ....+ +.+...+.+..++++.+.. ++..++++++.+++.+.|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 283 (384)
T 3zrp_A 204 PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLE 283 (384)
T ss_dssp HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9987766 210000 0000 12222 4466666666677776543 3566778888889988888
Q ss_pred chhcCCCeee--EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC----CEEEEeCCCCCCHHHHHHHHHH
Q psy14484 347 SLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----NTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 347 ~l~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~----~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
++ ....... ....+.++.+.+. . . . ..++.+.|.++||.+.++. +++|++++..++++++++++++
T Consensus 284 ~~-g~~~~~~~~~~~~~~~~~~~~~-~-~--~---~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~ 355 (384)
T 3zrp_A 284 AL-GLEIVARRPESYSNTVTGVILK-V-A--D---PQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISV 355 (384)
T ss_dssp HT-TCCBSCSSGGGBCSSEEEEECS-S-S--C---HHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHH
T ss_pred HC-CCeEccCcccccCccEEEEECC-C-C--C---HHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHH
Confidence 76 3332211 1123566666665 3 1 1 3679999999999999876 7899999999999999999999
Q ss_pred HHHHHHHh
Q psy14484 421 IFQTFNEV 428 (430)
Q Consensus 421 l~~~l~~~ 428 (430)
|++++.++
T Consensus 356 l~~~l~~~ 363 (384)
T 3zrp_A 356 IERTLRKL 363 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99998764
No 121
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=6.1e-26 Score=218.47 Aligned_cols=336 Identities=12% Similarity=0.044 Sum_probs=225.6
Q ss_pred EEEecccccccccCCCCCHHHHHHHHHHHhhcc-cccc-C---CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHH
Q psy14484 35 RYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVML-S---NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEV 109 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~-~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~ 109 (430)
.|+|+.++ |+.+|+|++++.+++.... .... . ........++++.+++.++.+++++++++||++|++.
T Consensus 3 ~yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~ 76 (384)
T 1eg5_A 3 VYFDNNAT------TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINW 76 (384)
T ss_dssp EECBTTTC------CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHH
T ss_pred EEEecCcc------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHH
Confidence 57786553 4689999999999887521 1000 0 1113455789999999998777899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++++++.... .+++.|++.+++||+.......+. ........++.+..... |++
T Consensus 77 ~~~~~~~~~~----~~gd~vl~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~~~~~~------------d~~ 130 (384)
T 1eg5_A 77 ILKTVAETFE----KRKRTIITTPIEHKAVLETMKYLS----------MKGFKVKYVPVDSRGVV------------KLE 130 (384)
T ss_dssp HHHHHHHHTT----TTCCEEEECTTSCHHHHHHHHHHH----------HTTCEEEECCBCTTSCB------------CHH
T ss_pred HHHhhhhhcc----CCCCEEEECCCCchHHHHHHHHHH----------hcCCEEEEEccCCCCcc------------CHH
Confidence 9998873100 056789999999987643321100 01112234443322222 789
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC--CEEEEeccccCCCCcccccccccCCCCCcee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN--IHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g--i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~ 267 (430)
+|+++++ +++++|++++ +++++|...+ +++|.++|+++| +++|+||+|+ ++... ..+. ...+|++
T Consensus 131 ~l~~~i~---~~~~~v~~~~-~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~~--~~~~--~~~~di~ 197 (384)
T 1eg5_A 131 ELEKLVD---EDTFLVSIMA-ANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKIP--FSLE--KLEVDYA 197 (384)
T ss_dssp HHHHHCC---TTEEEEEEES-BCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTSC--CCCT--TTCCSEE
T ss_pred HHHHHhC---CCCeEEEEEC-CCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCcc--cCch--hcCCCEE
Confidence 9998885 4788999998 9999998877 899999999999 9999999997 65321 2222 2347888
Q ss_pred eee--cccCCCccccEEEEEcHHH--HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHH
Q psy14484 268 CLS--KGITGGYLPLSLVMTTDKI--YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKI 341 (430)
Q Consensus 268 ~~s--K~l~gG~~~ig~~~~~~~~--~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l 341 (430)
++| |.++.. .+|++++++++ ...+.. . .......+++.+++++.++.++|+.+.+ ++..++++++.+++
T Consensus 198 ~~s~sK~~g~~--G~G~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 198 SFSAHKFHGPK--GVGITYIRKGVPIRPLIHG--G-GQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp EEEGGGGTSCT--TCEEEEECTTSCCCCSBCS--S-CTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EecHHHhcCCC--ceEEEEEcCCCcccccccc--C-cccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 766 975532 27999999875 222211 0 0001124556788888888888876532 45667777888888
Q ss_pred HHHHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------------------
Q psy14484 342 TKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----------------------- 397 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----------------------- 397 (430)
.+.|++. ......... ..+.++.+.+. .. . ..++.+.|.++||.+.++
T Consensus 273 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~---~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~ 344 (384)
T 1eg5_A 273 VSGLMNL-GAHIITPLEISLPNTLSVSFP-NI---R---GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRI 344 (384)
T ss_dssp HHHHHTT-TCEECSCTTSBCTTEEEEECT-TC---C---HHHHHHHHHHTTEECBC------------CHHHHTTCCHHH
T ss_pred HHHhCCC-CeEEeCCcccCCCCEEEEEeC-CC---C---HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhh
Confidence 8888762 211111101 12445555554 21 1 357888999999998873
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+++||+++..++++++++++++|+++++++
T Consensus 345 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 345 AQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp HHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2589999998899999999999999998764
No 122
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.95 E-value=1.1e-26 Score=225.25 Aligned_cols=332 Identities=11% Similarity=0.030 Sum_probs=218.2
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCC-CCHHHHHHHHHHHhh--cC-CCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNL-THKPVIKLSEKLSSL--TQ-YKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~-~~~~~~~l~~~l~~~--~~-~~~~~v~~~~sgteA 106 (430)
.|++++||.++. ..++ .+|.+++++.+++...... ....+ +.....++++.+++. .+ .++++|++++|++++
T Consensus 31 ~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~a 107 (400)
T 3asa_A 31 PQHTVINLSIGD--TTQP-LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVD 107 (400)
T ss_dssp TTSCCEECSSCC--CCCC-CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred CCCceEeccCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHH
Confidence 467899998874 3344 6899999999988764221 11122 233345777777777 45 567899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCC-eeEeCCCCCCCCCCCCChhHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNK-TYIITTPDSRNINKGNSANEIAR 185 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
++.+++++ . +++.|++.+++|+++....... + .. ...++.+......
T Consensus 108 l~~~~~~~-~--------~gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~~~~~~~~~~~~---------- 155 (400)
T 3asa_A 108 LFRLLSFF-G--------PNQTVAIQDPSYPAYLDIARLT-G------------AKEIIALPCLQENAFF---------- 155 (400)
T ss_dssp HHHHHHHH-C--------SSCEEEEEESCCHHHHHHHHHT-T------------CSEEEEEECCGGGTTC----------
T ss_pred HHHHHHHc-C--------CCCEEEECCCCcHHHHHHHHHc-C------------CcceEecccchhcCcc----------
Confidence 99876543 2 5678999999999875433221 1 11 2333332110000
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc-ccccccCCCCC
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-FFACEHAEIWP 264 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-~~~~~~~~~~~ 264 (430)
.++ ++ + +++++|++++ ++|++|. .++.+.+++|.++|+++|+++|+||+|+++++.+. ......++..+
T Consensus 156 ~~l---~~-~----~~~~~v~l~~-p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 225 (400)
T 3asa_A 156 PEF---PE-D----THIDILCLCS-PNNPTGT-VLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDAR 225 (400)
T ss_dssp CCC---CT-T----CCCSEEEEES-SCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGG
T ss_pred cCh---hh-c----cCccEEEEeC-CCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCC
Confidence 021 11 1 3566777777 8888885 46788999999999999999999999998865553 12222222112
Q ss_pred c----eeeeecccC-CCccccEEEEEcHHH-------HHhhhccCCcccccccCCC-CCCHHHHHHHHHHHHHHhhcCHH
Q psy14484 265 D----FLCLSKGIT-GGYLPLSLVMTTDKI-------YNSIYYKNNINIFLHSHSY-SGNPLACCAALATLEIFNKDNIL 331 (430)
Q Consensus 265 d----~~~~sK~l~-gG~~~ig~~~~~~~~-------~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~~~~~ 331 (430)
| +.++||.++ +| +|+|++++++++ ++.+.. ..+..++ +.+++++.++.++|+....++..
T Consensus 226 ~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 298 (400)
T 3asa_A 226 FCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWE------RFLSTTFNGASIPAQEAGVAGLSILPQLEAI 298 (400)
T ss_dssp GTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHH------HHHHHHCCCCCHHHHHHHHHHHHHTTTCHHH
T ss_pred CceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHH------HHhccCccCCChHHHHHHHHHhCcHHHHHHH
Confidence 3 568999997 57 799999999887 444432 1122334 57888888888888753335567
Q ss_pred HHHHHHHHHHHHHHHchhcCCCeeeEee-cceEEEEE-EeecCCccchhHHHHHHHHHHH-CCcEEeec-------CCEE
Q psy14484 332 QRISQDMKKITKALTSLITHPKIINFRQ-KGMIWAFD-VIIEDPEQIETFSKKFFVAALK-NELLLRPI-------GNTV 401 (430)
Q Consensus 332 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~a~~~~~~l~~-~Gv~~~~~-------~~~l 401 (430)
++++++.+++.+.|+++ . +....+ .|.++++. +. .... +.++.+.|++ +||.+.++ .+++
T Consensus 299 ~~~~~~~~~l~~~L~~~-g---~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~~gv~v~~g~~f~~~~~~~i 368 (400)
T 3asa_A 299 HYYRENSDLLRKALLAT-G---FEVFGGEHAPYLWVKPTQ-ANIS-----DRDLFDFFLREYHIAITPGIGFGRSGSGFV 368 (400)
T ss_dssp HHHHHHHHHHHHHHHHT-T---CEEEECSSSSEEEEECCC-TTCC-----TTTHHHHHHHHHSEECEEGGGGCGGGTTCE
T ss_pred HHHHHHHHHHHHHHHHC-C---CeeeCCCCceEEEEeccC-CCCC-----HHHHHHHHHHhCCEEEeChhHhCCCCCCEE
Confidence 78888888888888765 2 222333 46777777 54 3211 1357777765 49999875 3679
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
|++ +..+++++++++++|++++++
T Consensus 369 Ris--~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 369 RFS--SLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp EEE--CCSCHHHHHHHHHHHHC----
T ss_pred EEE--eeCCHHHHHHHHHHHHHHHHh
Confidence 997 468999999999999988764
No 123
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.95 E-value=8e-27 Score=225.92 Aligned_cols=343 Identities=11% Similarity=0.013 Sum_probs=219.1
Q ss_pred CCEEEecccccccccCCCCC--HHHHHHHHH-HHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCC--eEEEcCCc
Q psy14484 33 GKRYLDAISSWWVNLFGHSN--SYINKALKN-QLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLG--HCFYGSDG 103 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~--p~v~~a~~~-~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~--~v~~~~sg 103 (430)
...++||..|++..+.|+.+ |+|++++.+ ++..... +....+..++++++++.+.+... .+++ +|++|+||
T Consensus 25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~ 104 (397)
T 3fsl_A 25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGG 104 (397)
T ss_dssp CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCc
Confidence 34689999986656677665 899999999 8765321 11112233455556555544321 1467 89999999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--CCCCCCCCCCChh
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDSRNINKGNSAN 181 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 181 (430)
++|++.++++..... +++.|++.+++|+++.......+ .....++. ++.+..
T Consensus 105 ~~a~~~~~~~~~~~~------~gd~vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~------- 158 (397)
T 3fsl_A 105 SGALKVGADFLKRYF------PESGVWVSDPTWENHVAIFAGAG-------------FEVSTYPWYDEATNGV------- 158 (397)
T ss_dssp HHHHHHHHHHHHHHC------TTCCEEEESSCCHHHHHHHHHTT-------------CCEEEECCEETTTTEE-------
T ss_pred HHHHHHHHHHHHhcC------CCCeEEEeCCCchhHHHHHHHcC-------------CceEEEeeeeccCCcC-------
Confidence 999999987554332 66789999999998754433322 23344444 122222
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc--ccccc--
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG--KFFAC-- 257 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g--~~~~~-- 257 (430)
|+++|++.++++++++++++++. ++|++| ...+.+.+++|.++|++||+++|+||+|+++...+ .....
T Consensus 159 -----d~~~l~~~l~~~~~~~~~v~~~~-p~nptG-~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (397)
T 3fsl_A 159 -----RFNDLLATLKTLQAGSIVLLHPC-CHNPTG-ADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA 231 (397)
T ss_dssp -----CHHHHHHHHTTCCTTCEEEECSS-SCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred -----cHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-cCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHH
Confidence 88999999986545678888888 889999 56677789999999999999999999999886542 11111
Q ss_pred --ccCCCCCceeeeecccC-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH------
Q psy14484 258 --EHAEIWPDFLCLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF------ 325 (430)
Q Consensus 258 --~~~~~~~d~~~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~------ 325 (430)
...+....+.+|||.++ .| +|+|++++ ++++++.+.. ..+......+...+.+++.++.++++..
T Consensus 232 ~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 308 (397)
T 3fsl_A 232 IASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLG--QLKATVRRNYSSPPNFGAQVVAAVLNDEALKASW 308 (397)
T ss_dssp HHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHH--HHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHH
T ss_pred HHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHH--HHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHH
Confidence 11222233447899998 47 79999975 4455543322 0001112234444666666665555411
Q ss_pred h--hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEE
Q psy14484 326 N--KDNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVY 402 (430)
Q Consensus 326 ~--~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR 402 (430)
. .++..++++++.+++.+.|+++.....+....+. |.+.++.+. ...+.+.|.++||.+.+++ |
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~---R 375 (397)
T 3fsl_A 309 LKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----------AAQVDRLREEFGVYLIASG---R 375 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTTC---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC----------HHHHHHHHHhCCEEECCCC---e
Confidence 1 1345667777888888888776211022222233 444443332 1456677788899998876 8
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
|+++ .+++++|++++++|++++
T Consensus 376 is~~-~~~~~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 376 MCVA-GLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp EEGG-GCCTTTHHHHHHHHHHHC
T ss_pred EEEE-ecCHhhHHHHHHHHHhhC
Confidence 8875 446778999999998763
No 124
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=2.4e-26 Score=225.93 Aligned_cols=309 Identities=12% Similarity=0.052 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc--------------EEEEE-cCCCCCc
Q psy14484 77 KPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK--------------KFICL-QNSYHGE 139 (430)
Q Consensus 77 ~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~--------------~vl~~-~~~yhg~ 139 (430)
++++.+++.+.+.+ ++++++|++|+||++|++.++++++. +++ .|++. +++|+++
T Consensus 87 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~--------~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~ 158 (444)
T 3if2_A 87 AFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG--------AFVNEHSQDKESKSVDKSILLPLTPEYIGY 158 (444)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE--------EEECC-------CEEEEEEEESSSSCCGGG
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC--------CCccccccccccccccceEEEeCCCCccch
Confidence 45555555555443 45678999999999999999998754 222 46554 8899887
Q ss_pred chhhhccCCCccchhhhhccCCCeeEeCCCC-----CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccC
Q psy14484 140 TLGALAVTNIQSFKEIYTSLLNKTYIITTPD-----SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCA 214 (430)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~ 214 (430)
......... +......+..++.+. .+.. |+++|++++++..+++++|+++. ++|+
T Consensus 159 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~------------d~~~l~~~l~~~~~~~~~v~i~~-p~np 218 (444)
T 3if2_A 159 SDVHVEGQH-------FAAVLPHIDEVTHDGEEGFFKYRV------------DFEALENLPALKEGRIGAICCSR-PTNP 218 (444)
T ss_dssp TTCCSSSCC-------EEECCCEEEEEEETTEEEEEEEEC------------CHHHHHTCHHHHTTCEEEEEEES-SCTT
T ss_pred hhcccccch-------hhccCceEEecccccccCccccCC------------CHHHHHHHHHhcCCCceEEEeCC-CCCC
Confidence 543211100 011111222232221 0111 78899888543235788888877 7888
Q ss_pred CCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccccc-cc--ccCCCCCceeeeecccCCCccccEEEEEcHHHHH
Q psy14484 215 GGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF-AC--EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYN 291 (430)
Q Consensus 215 ~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~--~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~ 291 (430)
+|. ..+.+.+++|.++|++||+++|+||+|+.+ ..+..+ .. ...+...++.+|||.+.+| +++|++++++++++
T Consensus 219 tG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l~~ 295 (444)
T 3if2_A 219 TGN-VLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKVIE 295 (444)
T ss_dssp TCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHHHH
T ss_pred CCC-cCCHHHHHHHHHHHHHCCCEEEEECCCCCc-ccccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHHHH
Confidence 885 566777999999999999999999999743 111111 11 1123334566899985557 79999999999988
Q ss_pred hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEE
Q psy14484 292 SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-----KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWA 365 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~ 365 (430)
.+.. ..+..++..+++++.++.+.++..+ .....+.++++.+.+.+.|++. .........+..|.+++
T Consensus 296 ~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~ 369 (444)
T 3if2_A 296 AVSA------MNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLW 369 (444)
T ss_dssp HHHH------HHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEE
T ss_pred HHHH------HHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEE
Confidence 7765 3344566777888877777665211 1124455666666777777653 33222112234577777
Q ss_pred EEEeecCCccchhHHHHHHHHHHHCCcEEeecC---------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 366 FDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---------------NTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 366 ~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---------------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+.+. .... . ...+++.|.++||.+.++. +++||+++. ++++|++++++|++++.++.
T Consensus 370 ~~~~-~~~~-~---~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 370 LWFK-DLPI-S---TLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp EEET-TCSS-C---HHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHH
T ss_pred EEcC-CCCC-C---HHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHH
Confidence 7776 4111 1 3578889999999998741 479999886 99999999999999998764
No 125
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=5.5e-26 Score=220.70 Aligned_cols=334 Identities=11% Similarity=0.070 Sum_probs=221.2
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC-----CCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
++..|+|+.++. ..+|+|.+++.+++..........+ ..+...++++.+++.++.+++++++++|++++
T Consensus 25 ~~~~~ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a 98 (406)
T 3cai_A 25 DGWVHFDAPAGM------LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVL 98 (406)
T ss_dssp SSCEECBGGGCC------CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHH
T ss_pred CCeEEEeCCCcC------CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHH
Confidence 357888876542 4689999999998876321111112 23567889999999998777899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIAR 185 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 185 (430)
+..+++++.... .+++.|++.+++|++.......+.. .....+..++.+ .+...
T Consensus 99 l~~~~~~l~~~~-----~~gd~vi~~~~~~~~~~~~~~~~~~---------~~g~~v~~v~~~~~~~~~----------- 153 (406)
T 3cai_A 99 LSLLAEASSSRA-----GLGYEVIVSRLDDEANIAPWLRAAH---------RYGAKVKWAEVDIETGEL----------- 153 (406)
T ss_dssp HHHHHHHTGGGG-----BTTCEEEEETTSCGGGTHHHHHHHH---------HHBCEEEEECCCTTTCCC-----------
T ss_pred HHHHHHHHhhcc-----CCCCEEEEcCCccHHHHHHHHHHHH---------hcCCeEEEEecCcccCCc-----------
Confidence 999888652100 1567899999998875332221100 001223445443 22221
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 186 CAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 186 ~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
|+++|++.++ +++++|++++ ++|++|.+.+ +++|.++|+++|+++|+||+|+ ++... +....++ +|
T Consensus 154 -d~~~l~~~l~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~~--~d 219 (406)
T 3cai_A 154 -PTWQWESLIS---KSTRLVAVNS-ASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL--LDIRETD--AD 219 (406)
T ss_dssp -CGGGHHHHCC---TTEEEEEEES-BCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC--CCHHHHC--CS
T ss_pred -CHHHHHHHhC---CCceEEEEeC-CcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC--CCchhcC--CC
Confidence 7788888885 5789999999 9999998877 8999999999999999999997 33221 2222233 57
Q ss_pred eee--eecccCCCccccE-EEEEcHHHHHhhhccCCc-c--cccccCCCCCCHHHHHHHHHHHHHHhh------------
Q psy14484 266 FLC--LSKGITGGYLPLS-LVMTTDKIYNSIYYKNNI-N--IFLHSHSYSGNPLACCAALATLEIFNK------------ 327 (430)
Q Consensus 266 ~~~--~sK~l~gG~~~ig-~~~~~~~~~~~~~~~~~~-~--~~~~~~t~~~~~~~~~aa~~~l~~~~~------------ 327 (430)
+++ ++|.++ + ++| ++++++++.+.+...... . ........+.++.+++++.++++.+..
T Consensus 220 ~~~~s~~K~~g-~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 296 (406)
T 3cai_A 220 VVTVNAHAWGG-P--PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRER 296 (406)
T ss_dssp EEEEEGGGGTS-C--SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHH
T ss_pred EEEeehhhhcC-C--CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhh
Confidence 664 569664 3 389 999999888776541000 0 000011234567777677777776653
Q ss_pred -----cCHHHHHHHHHHHHHHHHHchhcCCCeeeEe---ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-
Q psy14484 328 -----DNILQRISQDMKKITKALTSLITHPKIINFR---QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG- 398 (430)
Q Consensus 328 -----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~- 398 (430)
++..++++++.+++.+.|+++ +.+.... ..+.++.+.+. . . . ..++.+.|.++||.+.++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~-~-~---~--~~~~~~~L~~~gi~v~~g~~ 366 (406)
T 3cai_A 297 LAVSMQSADAYLNRVFDYLMVSLRSL---PLVMLIGRPEAQIPVVSFAVH-K-V---P--ADRVVQRLADNGILAIANTG 366 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC---TTEEECCCCSSBCSEEEEEET-T-B---C--HHHHHHHHHHTTEECEECCS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcC---CCeEEcCCccccCCEEEEEEC-C-c---C--HHHHHHHHHHCCcEEecCCh
Confidence 234455667777777777654 3322111 13446666654 2 1 1 3578889999999988743
Q ss_pred -------------CEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 399 -------------NTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 399 -------------~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
+++|++++..++++++++++++|++
T Consensus 367 ~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 367 SRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp CHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999875
No 126
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.95 E-value=3.1e-26 Score=224.41 Aligned_cols=343 Identities=10% Similarity=0.055 Sum_probs=217.4
Q ss_pred ECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc-ccCCCC-----CHHHHHHHHHHHhhcCCCCCeEEEcCCc
Q psy14484 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLT-----HKPVIKLSEKLSSLTQYKLGHCFYGSDG 103 (430)
Q Consensus 30 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~-----~~~~~~l~~~l~~~~~~~~~~v~~~~sg 103 (430)
+.+|+++|||.++. +.-..+|.|.+++.+++...... ....+. .++.+.+++++.+.++..+++|++++|+
T Consensus 52 ~~~~~~~i~l~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~ 128 (432)
T 3ei9_A 52 KYPDAQVISLGIGD---TTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGA 128 (432)
T ss_dssp HCTTCCCEECSSCC---CCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCH
T ss_pred cCCCCCeEEccCCC---CCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCCh
Confidence 34678999998873 23347899999999998864321 111222 2344444444443346677899999999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHH
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 183 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (430)
++++..+ ..+.. +++.|++.+++|+++............+... .....+...++.+.....
T Consensus 129 ~~al~~l-~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~--------- 189 (432)
T 3ei9_A 129 KCDISRL-QVMFG--------SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD-VQKYGNIEYMRCTPENGF--------- 189 (432)
T ss_dssp HHHHHHH-HHHHC--------TTCCEEEEESCCTHHHHHHHHHTCSCCEETT-TTEETTCEEEECCGGGTT---------
T ss_pred HHHHHHH-HHHcC--------CCCEEEEeCCCCHHHHHHHHHcCCccccccc-ccccCceEEeccCcccCC---------
Confidence 9999874 44333 6788999999999886554433321111100 000012234433311000
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC---
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA--- 260 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~--- 260 (430)
..++++ ..++++++++. ++|++| ..++.+.+++|.++|++||+++|+||+|+++...+....+...
T Consensus 190 ----~~~l~~-----~~~~~~v~l~~-p~NPtG-~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 258 (432)
T 3ei9_A 190 ----FPDLST-----VGRTDIIFFCS-PNNPTG-AAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGA 258 (432)
T ss_dssp ----SCCGGG-----CCCCSEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTG
T ss_pred ----cCChhh-----CCCCCEEEEeC-CCCCCC-CCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCC
Confidence 011221 13556666667 788888 5567788999999999999999999999977554432222211
Q ss_pred -CCCCceeeeecccC-CCccccEEEEEcHHH--------HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH-H-h-h
Q psy14484 261 -EIWPDFLCLSKGIT-GGYLPLSLVMTTDKI--------YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI-F-N-K 327 (430)
Q Consensus 261 -~~~~d~~~~sK~l~-gG~~~ig~~~~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~-~-~-~ 327 (430)
+....+.+|||.++ .| +|+|++++++++ .+.+.. .....+++.+++++.++.+++.. . + .
T Consensus 259 ~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 259 EEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNR------IICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHH------HHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred CCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHH------HhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 12233558999998 57 899999999887 555543 22334456788888888887742 1 1 2
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-------C
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-------G 398 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-------~ 398 (430)
++..++++++.+++.+.|+++ .. .... ..|.++++.+. .. . ..++++.|+++ ||.+.|+ .
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~-g~---~~~~~~~~~~~~~~~~-~~----~--~~~~~~~ll~~~gv~v~~g~~f~~~~~ 400 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL-GY---DVYGGKNAPYVWVHFP-NQ----S--SWDVFAEILEKTHVVTTPGSGFGPGGE 400 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TC---CEEECSSSSEEEEECT-TS----C--HHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHC-Cc---eecCCCcceEEEEECC-CC----C--HHHHHHHHHHHCCEEEeCchHhCCCCC
Confidence 445667777888888888765 22 2223 35666666654 21 1 25677777665 9999874 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+++|+++ ..++++|++++++|++--
T Consensus 401 ~~iRis~--~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 401 GFVRVSA--FGHRENILEACRRFKQLY 425 (432)
T ss_dssp TEEEEEC--CSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEe--cCCHHHHHHHHHHHHHHh
Confidence 7899974 669999999999998754
No 127
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.95 E-value=1.7e-26 Score=224.73 Aligned_cols=344 Identities=10% Similarity=0.010 Sum_probs=218.5
Q ss_pred CCCEEEecccccccccCCC--CCHHHHHHHHH-HHhhccc--cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEE--cCC
Q psy14484 32 SGKRYLDAISSWWVNLFGH--SNSYINKALKN-QLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFY--GSD 102 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~-~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~--~~s 102 (430)
+|..++||..|......|+ .+|.+.+++.+ .+..... +....+..++++.+++.+.+..+ ..+++|++ |+|
T Consensus 27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g 106 (412)
T 1yaa_A 27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS 106 (412)
T ss_dssp CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence 4677899998865344443 46899999998 7653211 11112223444555555533221 24689999 999
Q ss_pred chHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-C-CCCCCCCCCCh
Q psy14484 103 GASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-P-DSRNINKGNSA 180 (430)
Q Consensus 103 gteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 180 (430)
|++|++.+++++.... +++.|++.+++|+++.......+ .....++. + ..+..
T Consensus 107 ~~~a~~~~~~~~~~~~------~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~------ 161 (412)
T 1yaa_A 107 GTGALHISAKFFSKFF------PDKLVYLSKPTWANHMAIFENQG-------------LKTATYPYWANETKSL------ 161 (412)
T ss_dssp HHHHHHHHHHHHHHHC------TTCCEEEEESCCTTHHHHHHTTT-------------CCEEEEECEETTTTEE------
T ss_pred hHhHHHHHHHHHHHhC------CCCEEEEeCCCCccHHHHHHHcC-------------ceEEEEeeecCCCCcc------
Confidence 9999999976655432 56789999999998754433322 22233433 1 11221
Q ss_pred hHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcc---ccccc
Q psy14484 181 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG---KFFAC 257 (430)
Q Consensus 181 ~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g---~~~~~ 257 (430)
|+++|++.+++.+....++++.. ++|++| ..++.+.+++|.++|++||+++|+||+|.++.+.+ ....+
T Consensus 162 ------d~~~l~~~l~~~~~~~~~~~~~~-p~nPtG-~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 233 (412)
T 1yaa_A 162 ------DLNGFLNAIQKAPEGSIFVLHSC-AHNPTG-LDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAV 233 (412)
T ss_dssp ------CHHHHHHHHHHSCTTCEEEEECS-SCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred ------CHHHHHHHHHhCCCCCEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHH
Confidence 78999999986433355666566 788888 56678889999999999999999999999886543 21122
Q ss_pred -ccCCCCC----c--eeeeecccCC-CccccEEEE--E-----cHH----HHHhhhccCCcccccccCCCCCCHHHHHHH
Q psy14484 258 -EHAEIWP----D--FLCLSKGITG-GYLPLSLVM--T-----TDK----IYNSIYYKNNINIFLHSHSYSGNPLACCAA 318 (430)
Q Consensus 258 -~~~~~~~----d--~~~~sK~l~g-G~~~ig~~~--~-----~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa 318 (430)
......+ + +.++||.++. | +|+|+++ + +++ +++.+.. .....+.+++++++.++
T Consensus 234 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~~~~a~ 306 (412)
T 1yaa_A 234 RLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAK------IIRSEVSNPPAYGAKIV 306 (412)
T ss_dssp HHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHH------HHHTTTSSCCHHHHHHH
T ss_pred HHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHH------HHhhccCCCChHHHHHH
Confidence 1111123 2 4478999987 7 8999998 7 565 6665543 12233445578888888
Q ss_pred HHHHHHHh--------hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC
Q psy14484 319 LATLEIFN--------KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN 390 (430)
Q Consensus 319 ~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~ 390 (430)
.++|+... .++..++++++.+++.+.|+++.....+....+.+.++.+.-. + ...+.+.+.++
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~ 377 (412)
T 1yaa_A 307 AKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL-T--------PQMVKRLEETH 377 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC-C--------HHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC-C--------HHHHHHHHHhC
Confidence 88876431 2345566777778888888765210012122333444433211 1 13454455578
Q ss_pred CcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 391 ELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 391 Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
||.+.+ .+||+++. .+++++++++++|+++++.+
T Consensus 378 gi~v~~---~~Ris~~~-~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 378 AVYLVA---SGRASIAG-LNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp CEECCT---TSEEEGGG-CCTTTHHHHHHHHHHHHHHC
T ss_pred CEEecc---CcEEEEcc-CCHhHHHHHHHHHHHHHHhh
Confidence 999876 47998874 59999999999999988753
No 128
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-25 Score=217.91 Aligned_cols=340 Identities=10% Similarity=0.059 Sum_probs=227.7
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhc-ccccc----CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL-EHVML----SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+|..|+|+.+ .|+.+|+|.+++.+++... ..... .....+...++++.+++.++.+++++++++||+++
T Consensus 27 ~~~~yld~~~------~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a 100 (416)
T 1qz9_A 27 EGVIYLDGNS------LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSIN 100 (416)
T ss_dssp TTCEECCTTT------SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHH
T ss_pred CCeEeecCCC------cCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHH
Confidence 5778999754 3567899999999998753 11110 01123667899999999998777899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
++.+++.++.... ++. +++++|++++.+|+.......... + .. ........++.
T Consensus 101 l~~al~~~~~~~~-~~~-~gd~vii~~~~~~~~~~~~~~~~~----~-~~-~~g~~~~~v~~------------------ 154 (416)
T 1qz9_A 101 LFKVLSAALRVQA-TRS-PERRVIVTETSNFPTDLYIAEGLA----D-ML-QQGYTLRLVDS------------------ 154 (416)
T ss_dssp HHHHHHHHHHHHH-HHS-TTCCEEEEETTSCHHHHHHHHHHH----H-HH-CSSCEEEEESS------------------
T ss_pred HHHHHHhhccccc-ccC-CCCcEEEEcCCCCCchHHHHHHHH----H-Hh-cCCceEEEeCc------------------
Confidence 9999988763200 001 345566777778875433221000 0 00 00112233332
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 266 (430)
+++|+++++ +++++|++++ +++++|.+.+ +++|.++|++||+++|+||+|+ ++... .....+ .+|+
T Consensus 155 -~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~ 220 (416)
T 1qz9_A 155 -PEELPQAID---QDTAVVMLTH-VNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--GADY 220 (416)
T ss_dssp -GGGHHHHCS---TTEEEEEEES-BCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSE
T ss_pred -HHHHHHHhC---CCceEEEEec-cccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--CCCE
Confidence 356677774 4789999999 9999998877 9999999999999999999997 54332 122222 3687
Q ss_pred eee--ecccCCCcccc-EEEEEcHHHHHhhhccCCccc------------------ccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 267 LCL--SKGITGGYLPL-SLVMTTDKIYNSIYYKNNINI------------------FLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 267 ~~~--sK~l~gG~~~i-g~~~~~~~~~~~~~~~~~~~~------------------~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
+++ +|.+++| .++ |++++++++.+.+... ..+. .......+.++.+++++.++++.+
T Consensus 221 ~~~s~~K~l~~g-~~~~g~l~~~~~~~~~l~~~-~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 298 (416)
T 1qz9_A 221 AIGCTYKYLNGG-PGSQAFVWVSPQLCDLVPQP-LSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVF 298 (416)
T ss_dssp EEECSSSTTCCC-TTCCCEEEECTTTTTTSCCS-CCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred EEecCcccCCCC-CCCeEEEEECHHHHhccCCC-ccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHH
Confidence 766 4998777 577 9999999887665431 0000 000112245777777777888877
Q ss_pred hh---cCHHHHHHHHHHHHHHHHHch-h--cCCCeeeE--eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec
Q psy14484 326 NK---DNILQRISQDMKKITKALTSL-I--THPKIINF--RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI 397 (430)
Q Consensus 326 ~~---~~~~~~~~~~~~~l~~~l~~l-~--~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~ 397 (430)
.+ ++..++++++.+++.+.|+++ . ........ ...+.++++.+. + ...+.+.|.++||.+...
T Consensus 299 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~--------~~~l~~~l~~~gi~~~~~ 369 (416)
T 1qz9_A 299 AQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP-E--------GYAVIQALIDRGVIGDYR 369 (416)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT-T--------HHHHHHHHHTTTEECEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC-C--------HHHHHHHHHhCCcEeccC
Confidence 54 345677888888888888765 3 22211111 013566666554 2 357899999999988754
Q ss_pred -CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -GNTVYLMPP-YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -~~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|++++ +.++++++++++++|++++.+.
T Consensus 370 ~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 370 EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 589999987 6899999999999999998753
No 129
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.95 E-value=4.6e-26 Score=222.06 Aligned_cols=308 Identities=12% Similarity=0.040 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHhhc--CCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC-CCCcEEEEE-cCCCCCcchhhhccCCCccc
Q psy14484 77 KPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF-LNKKKFICL-QNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 77 ~~~~~l~~~l~~~~--~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~-~~~~~vl~~-~~~yhg~~~~~~~~~~~~~~ 152 (430)
++++.+++.+.+.+ +.++++|++|+|+++|++.++++++.. |+ .++..|++. +++||++.........
T Consensus 79 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~----gd~~~~~~vi~~~~p~~~~~~~~~~~~~~---- 150 (417)
T 3g7q_A 79 ALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGR----RADGSTKKVLFPLAPEYIGYADSGLEDDL---- 150 (417)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC--------CCBEEEESSCCCHHHHHC-----CC----
T ss_pred HHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCC----CccCCcceEEEeCCCccccchhhccchhh----
Confidence 44445555554433 456789999999999999999988641 10 011277776 8999987543322111
Q ss_pred hhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
+......+..++... .+.. |+++|+ + .+++++++++. ++|++| ..++.+.+++|.++
T Consensus 151 ---~~~~~~~~~~~~~~~~~~~~------------d~~~l~--~---~~~~~~v~~~~-p~NptG-~~~~~~~~~~l~~~ 208 (417)
T 3g7q_A 151 ---FVSARPNIELLPEGQFKYHV------------DFEHLH--I---GEETGMICVSR-PTNPTG-NVITDEELMKLDRL 208 (417)
T ss_dssp ---EEECCCEEEEEGGGEEEEEC------------CGGGCC--C---CTTEEEEEEES-SCTTTC-CCCCHHHHHHHHHH
T ss_pred ---hccccCcccccCCccccccc------------CHHHhc--c---ccCceEEEECC-CCCCCC-CccCHHHHHHHHHH
Confidence 000111111121110 0011 556666 3 35688888887 888898 55667779999999
Q ss_pred HHhcCCEEEEeccccCCCCccccc-cc--ccCCCCCceeeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFF-AC--EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~-~~--~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
|++||+++|+||+|..+ ..+..+ .. ...+....+.+|||...+| +|+|++++++++++.+.. ..+..++
T Consensus 209 a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~------~~~~~~~ 280 (417)
T 3g7q_A 209 ANQHNIPLVIDNAYGVP-FPGIIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIAN------MNGIISL 280 (417)
T ss_dssp HHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHH------HHHHHCC
T ss_pred HHHcCCEEEEeCCCccc-cccccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHH------hhcceee
Confidence 99999999999999743 221111 11 1112223366899964456 899999999999888765 3455667
Q ss_pred CCCHHHHHHHHHHHHHHh-----hcCHHHHHHHHHHHHHHHHHch-hcCCCeeeEeecceEEEEEEeecCCccchhHHHH
Q psy14484 309 SGNPLACCAALATLEIFN-----KDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKK 382 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~ 382 (430)
+++++++.++.+.++... .....++++++.+.+.+.|++. ...+.....+..|.++++.+. .... . ..+
T Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~-~~~~-~---~~~ 355 (417)
T 3g7q_A 281 APGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFK-DLPI-T---TEL 355 (417)
T ss_dssp CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECT-TCSS-C---HHH
T ss_pred CCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcC-CCCC-C---HHH
Confidence 778888887777775211 0124445566667777777653 332222222445677777765 3111 1 357
Q ss_pred HHHHHHHCCcEEeec--------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 383 FFVAALKNELLLRPI--------------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 383 ~~~~l~~~Gv~~~~~--------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+++.|.++||.+.++ .+++||+++. ++++|++++++|++++.++.
T Consensus 356 l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 356 LYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp HHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHH
Confidence 888999999999874 2489999874 99999999999999998753
No 130
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=6.8e-26 Score=217.70 Aligned_cols=319 Identities=9% Similarity=0.093 Sum_probs=209.6
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC-e-EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG-H-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~-v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
.+|+|++++.+++.. +. .....+...++++++++.++...+ + +++++||++|++.+++.++. +++.
T Consensus 30 ~~~~v~~a~~~~~~~--~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~--------~gd~ 97 (376)
T 3f0h_A 30 SSEEVRAIGAEQVPY--FR--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFT--------KKDK 97 (376)
T ss_dssp CCHHHHHHHTSCCCC--CS--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCC--------TTCC
T ss_pred CcHHHHHHhcCCCCC--CC--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccC--------CCCe
Confidence 367888888765421 11 111225667888999999875542 4 55589999999999998764 6678
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
|++.+++|+++...... .........++.+..+.. |+++|+++++ +++++++++
T Consensus 98 vi~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~~l~~~~~---~~~~~v~~~ 151 (376)
T 3f0h_A 98 VLVIDGGSFGHRFVQLC-----------EIHEIPYVALKLEHGKKL------------TKEKLYEYDN---QNFTGLLVN 151 (376)
T ss_dssp EEEEESSHHHHHHHHHH-----------HHTTCCEEEEECCTTCCC------------CHHHHHTTTT---SCCCEEEEE
T ss_pred EEEEeCChhhHHHHHHH-----------HHcCCceEEEeCCCCCCC------------CHHHHHHhhc---cCceEEEEe
Confidence 89888888875422111 011223345555433333 7888888663 578889999
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEEcHH
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDK 288 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~~~~ 288 (430)
+ ++|++|.+.+ +++|.++|++||+++|+||+|+..++. +..+.+++...+.+++|+++++ .++|+++++++
T Consensus 152 ~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~~~~ 222 (376)
T 3f0h_A 152 V-DETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACP-PGISVIVLAPR 222 (376)
T ss_dssp S-EETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCC-SSCEEEEECHH
T ss_pred c-ccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCcc---ccccccCccEEEecCcccccCC-CceEEEEECHH
Confidence 8 9999998777 999999999999999999999854332 2333344433344566999865 57899999999
Q ss_pred HHHhhhccCCcccc------------cccCCCCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHchhcCC
Q psy14484 289 IYNSIYYKNNINIF------------LHSHSYSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 289 ~~~~~~~~~~~~~~------------~~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
+.+.+... ....+ .....++.+..+++++.++++.+.+. ...++.+++.+++.+.|+++ +
T Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 298 (376)
T 3f0h_A 223 GVERVEKS-KVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL---P 298 (376)
T ss_dssp HHHHHHTC-CCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS---S
T ss_pred HHHHhhcC-CCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence 88777641 11110 01123444555556666777766544 34455556666666666544 2
Q ss_pred Ce-eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 353 KI-INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 353 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.. ........++.+. . .+. . +.++.+.|.++ ||.+.++ ++++|++++..+|++++++++++|++++
T Consensus 299 ~~~~~~~~~~~~~~~~-~-~~~---~--~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 299 FELVSESPANGVTSVH-P-TTA---N--AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp EEECCSSBBTTEEEEE-E-SSS---C--HHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CccCccccCceEEEEe-C-CCC---C--HHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 11 1111223333333 2 211 1 36789999988 9999875 3689999999999999999999999988
Q ss_pred HH
Q psy14484 426 NE 427 (430)
Q Consensus 426 ~~ 427 (430)
++
T Consensus 372 ~~ 373 (376)
T 3f0h_A 372 KR 373 (376)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 131
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=3.8e-26 Score=220.60 Aligned_cols=322 Identities=13% Similarity=0.123 Sum_probs=219.7
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC-eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~v 129 (430)
.+|++++++.+++.. +. .....+...++++++++.++...+ ++++++||++|++.+++.+.. ++++|
T Consensus 34 ~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~--------~gd~v 101 (393)
T 3kgw_A 34 LAPRVLAAGSLRMIG--HM--QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLE--------PGDSF 101 (393)
T ss_dssp CCHHHHHHTTCCCCC--TT--SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCC--------TTCEE
T ss_pred CCHHHHHHhcccccC--cc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCC--------CCCEE
Confidence 478888888764321 11 011235667889999999875554 599999999999999998753 67788
Q ss_pred EEEcCCCCCcch-hhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 130 ICLQNSYHGETL-GALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 130 l~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
++..++|++... ...... ......++.+..... |+++|++++++ .++++|+++
T Consensus 102 l~~~~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~------------d~~~l~~~i~~--~~~~~v~~~ 155 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRI------------GARVHQMIKKPGEHY------------TLQEVEEGLAQ--HKPVLLFLV 155 (393)
T ss_dssp EEEESSHHHHHHHHHHHHT------------TCEEEEEECCTTCCC------------CHHHHHHHHHH--HCCSEEEEE
T ss_pred EEEeCCchhHHHHHHHHHc------------CCceEEEeCCCCCCC------------CHHHHHHHHhh--CCCcEEEEe
Confidence 888888765421 111111 123344444432222 88999999974 267888999
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
+ ++|++|...+ +++|.++|++||+++|+||+|+ ++. ..+..+.+ .+|++++| |+++|+ .++|+++++
T Consensus 156 ~-~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g~--~~~~~~~~--~~d~~~~s~sK~~~~~-~g~g~~~~~ 224 (393)
T 3kgw_A 156 H-GESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LGG--VPIYMDQQ--GIDIMYSSSQKVLNAP-PGISLISFN 224 (393)
T ss_dssp S-EETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TTT--SCCCTTTT--TCCEEEEESSSTTCCC-SSCEEEEEC
T ss_pred c-cCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-ccC--cccchhhc--CCCEEEecCcccccCC-CceeEEEEC
Confidence 9 9999998777 8899999999999999999987 321 12222222 35776655 999776 579999999
Q ss_pred HHHHHhhhccCC-cccc----------------cccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHH
Q psy14484 287 DKIYNSIYYKNN-INIF----------------LHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALT 346 (430)
Q Consensus 287 ~~~~~~~~~~~~-~~~~----------------~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 346 (430)
+++++.+..... ...+ ....+++.+..+++++.++++.+.+ ++..++++++.+++.+.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 304 (393)
T 3kgw_A 225 DKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQ 304 (393)
T ss_dssp HHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999887754100 0000 0112344577777777788876654 4567788888889999888
Q ss_pred chhcCCCee-e-EeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeC-CCCCCHHHHHHH
Q psy14484 347 SLITHPKII-N-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMP-PYILNKNEIQHM 417 (430)
Q Consensus 347 ~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~-~~~~t~e~i~~~ 417 (430)
++ ...... . ....+.++++.+. .+.. +.++.+.|+++ ||.+.++ ++++|+++ ++..++++++++
T Consensus 305 ~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~ 377 (393)
T 3kgw_A 305 EM-GLKFFVKDPEIRLPTITTVTVP-AGYN-----WRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRV 377 (393)
T ss_dssp HT-TCCBSSSSGGGBCSSEEEEECC-TTBC-----HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHH
T ss_pred Hc-CCeeccCChhhcCCeEEEEeCC-CCCC-----HHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHH
Confidence 76 332211 1 1223455566654 3211 36789999888 9999874 47999998 666799999999
Q ss_pred HHHHHHHHHHh
Q psy14484 418 TSAIFQTFNEV 428 (430)
Q Consensus 418 ~~~l~~~l~~~ 428 (430)
+++|+++++++
T Consensus 378 ~~~l~~~l~~~ 388 (393)
T 3kgw_A 378 AEALREALQHC 388 (393)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 132
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=7.9e-26 Score=216.13 Aligned_cols=332 Identities=15% Similarity=0.181 Sum_probs=223.7
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCC---CeEEEcCCchHHHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKL---GHCFYGSDGASAVEVALK 112 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---~~v~~~~sgteA~~~al~ 112 (430)
++||..| +++ .+|+|++++.+++ .+.. ..+.++...++++.+++.++ .+ +++++++||++|++.+++
T Consensus 5 ~~~~~~g----p~~-~~~~v~~a~~~~~---~~~~-~~~~~~~~~~l~~~la~~~g-~~~~~~~v~~~~g~t~a~~~~~~ 74 (366)
T 1m32_A 5 YLLLTPG----PLT-TSRTVKEAMLFDS---CTWD-DDYNIGVVEQIRQQLTALAT-ASEGYTSVLLQGSGSYAVEAVLG 74 (366)
T ss_dssp CEECSSS----SCC-CCHHHHHTTCCCC---CTTS-HHHHTTTHHHHHHHHHHHHC-SSSSEEEEEEESCHHHHHHHHHH
T ss_pred cccccCC----CcC-CCHHHHHHHhhhh---cCCC-HHHHHHHHHHHHHHHHHHhC-CCCcCcEEEEecChHHHHHHHHH
Confidence 5677665 343 7899999988742 1110 00111456788888888886 33 479999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
+++. +++.|+++++.||+....... .........++.+..... |+++|+
T Consensus 75 ~~~~--------~gd~vi~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~~l~ 123 (366)
T 1m32_A 75 SALG--------PQDKVLIVSNGAYGARMVEMA-----------GLMGIAHHAYDCGEVARP------------DVQAID 123 (366)
T ss_dssp HSCC--------TTCCEEEEESSHHHHHHHHHH-----------HHHTCCEEEEECCTTSCC------------CHHHHH
T ss_pred HhcC--------CCCeEEEEeCCCccHHHHHHH-----------HHhCCceEEEeCCCCCCC------------CHHHHH
Confidence 8753 456788888777764221111 011123344544332222 889999
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--ee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LS 270 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~s 270 (430)
+++++. .+++++++.. +++++|.+.+ +++|.++|++||+++|+||+|+ ++..+ +.+. ...+|+++ ++
T Consensus 124 ~~l~~~-~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~--~~~~--~~~~di~~~s~~ 192 (366)
T 1m32_A 124 AILNAD-PTISHIAMVH-SETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIP--MDIA--ALHIDYLISSAN 192 (366)
T ss_dssp HHHHHC-TTCCEEEEES-EETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCTT--TTTCSEEEEESS
T ss_pred HHHhcC-CCeEEEEEec-ccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcC--cccc--ccCccEEEecCc
Confidence 999863 2456666666 7788897777 9999999999999999999997 43332 1222 23467774 67
Q ss_pred cccCCCccccEEEEEcHHHHHhhhccCCccccc--------------ccCCCCCCHHHHHHHHHHHHHHhhc----CHHH
Q psy14484 271 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL--------------HSHSYSGNPLACCAALATLEIFNKD----NILQ 332 (430)
Q Consensus 271 K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~--------------~~~t~~~~~~~~~aa~~~l~~~~~~----~~~~ 332 (430)
|+++++ .++|++++++++++.+... ..++. ....++.++.+++++.++++.+... ...+
T Consensus 193 K~~~~~-~g~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 269 (366)
T 1m32_A 193 KCIQGV-PGFAFVIAREQKLAACKGH--SRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQ 269 (366)
T ss_dssp STTCCC-SSEEEEEEEHHHHTTCTTC--CSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccCC-CceEEEEECHHHHHhhcCC--CCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHH
Confidence 998776 4789999999988766541 11110 0113567888888888888866443 3667
Q ss_pred HHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----CCEEEEeCCC
Q psy14484 333 RISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----GNTVYLMPPY 407 (430)
Q Consensus 333 ~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----~~~lR~~~~~ 407 (430)
+++++.+++.+.|+++ ........ ...+.++++.+. +... .. +.++.+.|.++||.+.++ .+++|++++.
T Consensus 270 ~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~ 344 (366)
T 1m32_A 270 RYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSP-EDPQ-YR--FSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIG 344 (366)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECC-CCTT-CC--HHHHHHHHHHTTEECEECCCSSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcC-ccCC-CC--HHHHHHHHHHCCEEEECCcCCCCCEEEEecCC
Confidence 7888888888888776 33322111 123557777765 3100 11 367999999999999875 3789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l~~ 427 (430)
.++++++++++++|++++.+
T Consensus 345 ~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 345 EVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp SCCHHHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999988754
No 133
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=5.5e-26 Score=220.95 Aligned_cols=322 Identities=11% Similarity=0.072 Sum_probs=219.9
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCe-EEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGH-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~v 129 (430)
.+|++.+++.+++. .+. .....+...++++++++.++...++ +++++||++|++.+++.+.. ++++|
T Consensus 24 ~~~~v~~a~~~~~~--~~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~--------~gd~V 91 (411)
T 3nnk_A 24 ADPRVLRAMSSQLI--GQY--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIR--------PGDKV 91 (411)
T ss_dssp CCHHHHHHHTSCCC--CTT--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCC--------TTCEE
T ss_pred CCHHHHHHhhcccc--ccc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcC--------CCCEE
Confidence 46888888776431 111 0111255678899999999766665 78889999999999998853 67899
Q ss_pred EEEcCCCCCcch-hhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 130 ICLQNSYHGETL-GALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 130 l~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
++.+++||+... ..... .......++.+..... |+++|++++++ .++++|+++
T Consensus 92 l~~~~~~~~~~~~~~~~~------------~g~~~~~v~~~~~~~~------------d~~~l~~~i~~--~~~~~v~~~ 145 (411)
T 3nnk_A 92 LVPVFGRFGHLLCEIARR------------CRAEVHTIEVPWGEVF------------TPDQVEDAVKR--IRPRLLLTV 145 (411)
T ss_dssp EEEECSHHHHHHHHHHHH------------TTCEEEEEECCTTCCC------------CHHHHHHHHHH--HCCSEEEEE
T ss_pred EEecCCchHHHHHHHHHH------------cCCeEEEEecCCCCCC------------CHHHHHHHHhh--CCCeEEEEe
Confidence 999999987421 11111 1123345555433332 88999999974 267889999
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~ 286 (430)
+ ++|++|.+.+ +++|.++|++||+++|+||+++ ++.. .+..... .+|+++ ++|+++++ .++|+++++
T Consensus 146 ~-~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~--~~~~~~~--~~d~~~~s~~K~l~~~-~g~g~~~~~ 214 (411)
T 3nnk_A 146 Q-GDTSTTMLQP----LAELGEICRRYDALFYTDATAS-LGGN--PLETDVW--GLDAVSAGMQKCLGGP-SGTSPITLS 214 (411)
T ss_dssp S-EETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-BTTB--CCCTTTT--TCSEEECCSTTTTCCC-SSEEEEEEC
T ss_pred C-CCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-cCCc--ccchhcc--CCcEEEecCccccCCC-CceEEEEEC
Confidence 9 9999998877 8899999999999999999986 3221 1222223 356665 55887776 589999999
Q ss_pred HHHHHhhhccCCcccc------------------------------cccCCCCCCHHHHHHHHHHHHHHhhc---CHHHH
Q psy14484 287 DKIYNSIYYKNNINIF------------------------------LHSHSYSGNPLACCAALATLEIFNKD---NILQR 333 (430)
Q Consensus 287 ~~~~~~~~~~~~~~~~------------------------------~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~ 333 (430)
+++.+.+.......+. ......+.+..+++++.++++.+.+. +..++
T Consensus 215 ~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 294 (411)
T 3nnk_A 215 ARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIAR 294 (411)
T ss_dssp HHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 9988776541000000 00122344677777777778765443 56677
Q ss_pred HHHHHHHHHHHHHchhcCCCee-eEeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeC-
Q psy14484 334 ISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMP- 405 (430)
Q Consensus 334 ~~~~~~~l~~~l~~l~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~- 405 (430)
++++.+++.+.|+++ ...... .....+.++.+.+. .+.. +.++.+.|+++ ||.+.++ ++++|+++
T Consensus 295 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~ 367 (411)
T 3nnk_A 295 HKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIP-QGIN-----GDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTM 367 (411)
T ss_dssp HHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECC-TTCC-----HHHHHHHHHHHHSEEEEECCGGGTTTEEEEECC
T ss_pred HHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECC-CCCC-----HHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCc
Confidence 888888998888876 222221 11224566777664 3211 36788888877 9999874 47999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++.++++++++++++|+++++++
T Consensus 368 ~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 368 GYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCcCCHHHHHHHHHHHHHHHHHc
Confidence 77789999999999999998764
No 134
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=1.8e-25 Score=216.03 Aligned_cols=336 Identities=11% Similarity=0.048 Sum_probs=227.1
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALK 112 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~ 112 (430)
...|+|..+ .++.+|++++++.+++.. + ......+...++++.+++.++.+++++++++||++|+..+++
T Consensus 8 ~~~yl~~~~------~~~~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~ 77 (392)
T 2z9v_A 8 DPVITLTAG------PVNAYPEVLRGLGRTVLY--D--YDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAA 77 (392)
T ss_dssp CCSEECSSS------CCCCCHHHHHHTTSCCCC--T--TSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHH
T ss_pred CcceeecCC------CcCCCHHHHHHHhccccc--c--ccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHH
Confidence 346777543 235789999998876543 1 101123456789999999998777899999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHH
Q psy14484 113 MSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192 (430)
Q Consensus 113 ~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 192 (430)
++.. +++.|++.+++||+....... .........++.+..... |+++|+
T Consensus 78 ~~~~--------~gd~Vl~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~~l~ 126 (392)
T 2z9v_A 78 SLIS--------PDDVVLNLASGVYGKGFGYWA-----------KRYSPHLLEIEVPYNEAI------------DPQAVA 126 (392)
T ss_dssp HHCC--------TTCCEEEEESSHHHHHHHHHH-----------HHHCSCEEEEECCTTSCC------------CHHHHH
T ss_pred HhcC--------CCCEEEEecCCcccHHHHHHH-----------HHcCCceEEeeCCCCCCC------------CHHHHH
Confidence 8743 567899999999876311110 001123345554432222 889999
Q ss_pred HHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--ee
Q psy14484 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LS 270 (430)
Q Consensus 193 ~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~s 270 (430)
+++++. +++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+.... ..+|+++ ++
T Consensus 127 ~~l~~~-~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~--~~~~~~--~~~d~~~~s~s 195 (392)
T 2z9v_A 127 DMLKAH-PEITVVSVCH-HDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGM--KTHPED--CKADIYVTGPN 195 (392)
T ss_dssp HHHHHC-TTCCEEEEES-EEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTB--SCCGGG--GTCSEEEECSS
T ss_pred HHHhcC-CCCcEEEEec-cCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCc--cccccc--ccceEEEecCc
Confidence 999652 3577888888 9999998877 8999999999999999999997 4322 122222 2467765 56
Q ss_pred cccCCCccccEEEEEcHHHHHhhhccCC-c-----------cc--ccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHH
Q psy14484 271 KGITGGYLPLSLVMTTDKIYNSIYYKNN-I-----------NI--FLHSHSYSGNPLACCAALATLEIFNK---DNILQR 333 (430)
Q Consensus 271 K~l~gG~~~ig~~~~~~~~~~~~~~~~~-~-----------~~--~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~ 333 (430)
|.++++ .++|++++++++++.+..... . .. .......+.+..+++++.++++.+.+ +...++
T Consensus 196 K~~~~~-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 274 (392)
T 2z9v_A 196 KCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWAR 274 (392)
T ss_dssp STTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccccCC-CceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 988775 467999999998776643000 0 00 00112234466666667777776543 345677
Q ss_pred HHHHHHHHHHHHHchhcCCCee-e-EeecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeC
Q psy14484 334 ISQDMKKITKALTSLITHPKII-N-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMP 405 (430)
Q Consensus 334 ~~~~~~~l~~~l~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~ 405 (430)
++++.+++.+.|+++ ...... . ....+.++.+.+. .+.. +.++.+.|.++ ||.+.++ .+.+|+++
T Consensus 275 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~ 347 (392)
T 2z9v_A 275 HALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTP-DGVD-----EKALRQAARARYGVVFSSGRGETLGKLTRIGH 347 (392)
T ss_dssp HHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECC-TTCC-----HHHHHHHHHHHHCEECEECCGGGTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECC-CCCC-----HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeC
Confidence 888888888888775 333221 1 0124566666664 3211 35789999988 9999875 47899996
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHHh
Q psy14484 406 PY-ILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~-~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.. .++++++++++++|+++++++
T Consensus 348 ~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 348 MGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cccccCHHHHHHHHHHHHHHHHHc
Confidence 44 889999999999999998764
No 135
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.94 E-value=2.8e-26 Score=217.04 Aligned_cols=310 Identities=12% Similarity=0.077 Sum_probs=205.9
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgteA~~~a 110 (430)
.+++||.++. +.++ .+|++.+++.+++..... ..++.....++++.+++.++ .++++|++++|+++|++.+
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~---~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~ 92 (335)
T 1uu1_A 19 RDKTYLALNE--NPFP-FPEDLVDEVFRRLNSDAL---RIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVM 92 (335)
T ss_dssp CCSEEESSCC--CSSC-CCHHHHHHHHHTCCGGGG---GSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHH
T ss_pred CcceECCCCC--CCCC-CCHHHHHHHHHHhhhhhh---hcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHH
Confidence 4688988874 4565 689999999988733211 12222235677777777776 6778999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++ ++.|++. ++||++.......+ .....++.+..+.. |+++
T Consensus 93 ~~~~-----------gd~Vl~~-p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~ 135 (335)
T 1uu1_A 93 MLMF-----------DRSVFFP-PTYSCYRIFAKAVG-------------AKFLEVPLTKDLRI------------PEVN 135 (335)
T ss_dssp HHHS-----------SEEEECS-SSCHHHHHHHHHHT-------------CEEEECCCCTTSCC------------CCCC
T ss_pred HHHh-----------CCcEEEC-CCcHHHHHHHHHcC-------------CeEEEeccCCCCCC------------CHHH
Confidence 8876 2578888 99998754332211 12223333221111 3343
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccc-cccCCCCCceeee
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA-CEHAEIWPDFLCL 269 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~-~~~~~~~~d~~~~ 269 (430)
| +++++|++.. ++|++|.+. +.+.+++|.+.| | ++|+||+|+++... .... .+..+....+.++
T Consensus 136 l--------~~~~~v~l~~-p~nptG~~~-~~~~l~~l~~~~---~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~ 200 (335)
T 1uu1_A 136 V--------GEGDVVFIPN-PNNPTGHVF-EREEIERILKTG---A-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTF 200 (335)
T ss_dssp C--------CTTEEEEEES-SCTTTCCCC-CHHHHHHHHHTT---C-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEES
T ss_pred c--------CCCCEEEEeC-CCCCCCCCC-CHHHHHHHHHhC---C-EEEEECcchhhcch-hHHHHhhhCCCEEEEecc
Confidence 3 2456666555 567888555 545555555544 8 89999999976432 2111 1222223445689
Q ss_pred ecccC-CCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHc
Q psy14484 270 SKGIT-GGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-KDNILQRISQDMKKITKALTS 347 (430)
Q Consensus 270 sK~l~-gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~ 347 (430)
||.++ .| +|+|++++++++++.+.. ...+++.+++++.++.++|+..+ .++..++++++.+++.+.|++
T Consensus 201 sK~~g~~G-~r~G~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 271 (335)
T 1uu1_A 201 SKAFSLAA-QRVGYVVASEKFIDAYNR--------VRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE 271 (335)
T ss_dssp TTTTTCGG-GCCEEEEECHHHHHHHHH--------HSCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcc-cCeEEEEeCHHHHHHHHH--------hcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 56 799999999999888765 22456788998888888887432 234566777788888888876
Q ss_pred hhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 348 LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 348 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
+ ... ..+..|.++++.+. . .. ..++.+.|.++||.+.+..+++|++++ +++++++++++|+++
T Consensus 272 ~-g~~---~~~~~~~~~~~~~~-~----~~--~~~~~~~l~~~gi~v~~~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 272 M-GYR---ITDSRGNFVFVFME-K----EE--KERLLEHLRTKNVAVRSFREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp H-TCC---BCCCCSSEEEEECC-T----HH--HHHHHHHHHHHTEEEEEETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred C-CcE---EcCCCCeEEEEECC-C----CC--HHHHHHHHHHCCEEEEECCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 5 222 12445677766655 2 11 357889999999999998889999875 578899999998754
No 136
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=3.5e-26 Score=226.12 Aligned_cols=349 Identities=12% Similarity=0.118 Sum_probs=232.5
Q ss_pred CCEEEecccccccccCCCCCHHHHHHHHHHHhhcccc----ccC--CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHH
Q psy14484 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV----MLS--NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASA 106 (430)
Q Consensus 33 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA 106 (430)
+..|+|. +.+|..++.+.+++.+++...... ... ....+..+++++++++.+++++++|++++|++++
T Consensus 67 ~~iyld~------~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a 140 (465)
T 3e9k_A 67 NAIYFLG------NSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVN 140 (465)
T ss_dssp BCEECBT------TTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHH
T ss_pred CeEEecC------CccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHH
Confidence 4567763 457877888888888877554321 111 1223455678899999998888899999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARC 186 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (430)
++.+++.+... | ..+++||+.++.||+..............+... ..+...+.+..+..
T Consensus 141 l~~~~~~~~~~----~-~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~----~~v~~~~~~~~~~~------------ 199 (465)
T 3e9k_A 141 LHLLMLSFFKP----T-PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE----SMRMIKPREGEETL------------ 199 (465)
T ss_dssp HHHHHHHHCCC----C-SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH----HEEEECCCTTCSSC------------
T ss_pred HHHHHHHhccc----c-CCCCEEEEcCCcCCchHHHHHHHHHHcCCccee----eeEEEecCCCCCcc------------
Confidence 99999887542 1 145679999999987543221110000000000 00112233322222
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCce
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~ 266 (430)
|+++|+++++++.+++++|++++ ++|++|.+.+ +++|.++|++||+++|+|++|+ .+... .....+ ..|+
T Consensus 200 d~~~l~~~i~~~~~~~~lv~~~~-~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~-~g~~~--~~~~~~--~~D~ 269 (465)
T 3e9k_A 200 RIEDILEVIEKEGDSIAVILFSG-VHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA-VGNVE--LYLHDW--GVDF 269 (465)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEES-BCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC--CCHHHH--TCCE
T ss_pred CHHHHHHHHHhcCCCeEEEEEeC-cccCcceeec----HHHHHHHHHHcCCEEEEEhhhh-cCCcC--Cchhhc--CCCE
Confidence 78999999986545799999999 9999998887 9999999999999999999987 43221 222222 3566
Q ss_pred ee--eecccCCCccccEEEEEcHHHHHhhhccCCcc--------ccccc------------CCCCCCHHHHHHHHHHHHH
Q psy14484 267 LC--LSKGITGGYLPLSLVMTTDKIYNSIYYKNNIN--------IFLHS------------HSYSGNPLACCAALATLEI 324 (430)
Q Consensus 267 ~~--~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~--------~~~~~------------~t~~~~~~~~~aa~~~l~~ 324 (430)
++ ++|.+.+|..++|++++++++.+.+.+. ..+ .+... ...+.+.+++++..++++.
T Consensus 270 ~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~ 348 (465)
T 3e9k_A 270 ACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPA-LVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI 348 (465)
T ss_dssp EEECSSSTTCCCTTCCCEEEECGGGTTTSCCS-SCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred EEECcccccccCCCceEEEEEcHHHHhhcCCc-ccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence 64 5599965435689999999887655431 000 00000 0114567777777778876
Q ss_pred Hhh---cCHHHHHHHHHHHHHHHHHchh-c------CCCeee-----EeecceEEEEEEeecCCccchhHHHHHHHHHHH
Q psy14484 325 FNK---DNILQRISQDMKKITKALTSLI-T------HPKIIN-----FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK 389 (430)
Q Consensus 325 ~~~---~~~~~~~~~~~~~l~~~l~~l~-~------~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 389 (430)
+++ +++.++.+++.+++.+.|+++. . .+++.- ....|.++.+.+. .+ ...+.+.|.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~-~~-------~~~l~~~L~~ 420 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS-VP-------NKDVFQELEK 420 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC-CT-------TCCHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec-CC-------HHHHHHHHHH
Confidence 654 4567778888888888887641 0 022221 1224788888765 32 1358889999
Q ss_pred CCcEEeec-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q psy14484 390 NELLLRPI-GNTVYLMP-PYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 390 ~Gv~~~~~-~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+||.+... ++++||++ ++.++++++++++++|++++++
T Consensus 421 ~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 421 RGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp TTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 99998765 48999999 8999999999999999998864
No 137
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.94 E-value=5.8e-25 Score=211.31 Aligned_cols=333 Identities=11% Similarity=-0.013 Sum_probs=220.6
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCC-----CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-----LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
|+|+.++ +..+|++.+++.+++.+........ ...+...++++++++.++.+++++++++||++|++.+
T Consensus 3 yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~ 76 (382)
T 4hvk_A 3 YFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLA 76 (382)
T ss_dssp BCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHH
T ss_pred eecCCCc------CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHH
Confidence 6776554 3468999999999887632111111 1235567899999999987778999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++...... +++.|++.++.|++......... ........++.+..... |+++
T Consensus 77 ~~~~~~~~~~----~gd~vi~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~~~~~~------------d~~~ 130 (382)
T 4hvk_A 77 IIGYAMRNAR----KGKHILVSAVEHMSVINPAKFLQ----------KQGFEVEYIPVGKYGEV------------DVSF 130 (382)
T ss_dssp HHHHHHHHGG----GCCEEEEETTCCHHHHHHHHHHH----------HTTCEEEEECBCTTSCB------------CHHH
T ss_pred HHHhhhhhcC----CCCEEEECCCCcHHHHHHHHHHH----------hcCCEEEEeccCCCCCc------------CHHH
Confidence 9987631100 56789998888887643322210 01123345554433322 8899
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC-- 268 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~-- 268 (430)
|+++++ +++++|++++ ++|++|...+ +++|.++|++||+ +|+||+|+ ++.. .+..... .+|+++
T Consensus 131 l~~~i~---~~~~~v~~~~-~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~-~~~~--~~~~~~~--~~d~~~~s 196 (382)
T 4hvk_A 131 IDQKLR---DDTILVSVQH-ANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS-VGQI--EVDVEKI--GADMLTIS 196 (382)
T ss_dssp HHHHCC---TTEEEEECCS-BCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT-BTTB--CCCHHHH--TCSEEEEE
T ss_pred HHHHhc---cCceEEEEEC-CCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh-cCCC--CCCchhc--CCCEEEEe
Confidence 999885 5789999999 9999998877 9999999999999 99999986 3221 1122222 356665
Q ss_pred eecccCCCccccEEEEEcHHHHHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGITGGYLPLSLVMTTDKIYNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKAL 345 (430)
Q Consensus 269 ~sK~l~gG~~~ig~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l 345 (430)
++|.++. .++|+++++++. .+...- .........+.+.+..++.++.++++.+.+ ++..++++++.+++.+.|
T Consensus 197 ~~K~~g~--~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 272 (382)
T 4hvk_A 197 SNDIYGP--KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNV 272 (382)
T ss_dssp SGGGTSC--TTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC--CceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 5596443 358999888764 121100 000000112334466777777777765443 456677777888888887
Q ss_pred HchhcCCCeeeEe----ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------
Q psy14484 346 TSLITHPKIINFR----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 397 (430)
Q Consensus 346 ~~l~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------ 397 (430)
+++ +.+.... ..+.++.+.+. .. . ...+.+.|.++||.+.++
T Consensus 273 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~---~---~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~ 342 (382)
T 4hvk_A 273 LKI---EESYLNGHPEKRLPNNVNVRFS-YI---E---GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEA 342 (382)
T ss_dssp TTS---TTEEECSCSSSBCTTEEEEEET-TC---C---HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHH
T ss_pred hcC---CCeEEeCCccccCCCEEEEEEC-CC---C---HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhc
Confidence 754 3322111 11345555554 21 1 357889999999998864
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|++++..++++++++++++|++++.++
T Consensus 343 ~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 343 HGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp HTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999998765
No 138
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=1.3e-24 Score=209.06 Aligned_cols=333 Identities=11% Similarity=0.004 Sum_probs=219.5
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCC-----CHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT-----HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVA 110 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~a 110 (430)
|+|+.++ |+.+|+|++++.+++..........+. .+...++++.+++.++.+++++++++||++|++.+
T Consensus 3 yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~ 76 (382)
T 4eb5_A 3 YFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLA 76 (382)
T ss_dssp BCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHH
T ss_pred eeccCCC------CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHH
Confidence 6786654 467999999999988753111111121 24668899999999987777999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHH
Q psy14484 111 LKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190 (430)
Q Consensus 111 l~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (430)
++++..+... +++.|++.+++|++.......... .....+.++.+..... |+++
T Consensus 77 ~~~l~~~~~~----~gd~Vl~~~~~~~~~~~~~~~~~~----------~g~~~~~v~~~~~~~~------------d~~~ 130 (382)
T 4eb5_A 77 IIGYAMRNAR----KGKHILVSAVEHMSVINPAKFLQK----------QGFEVEYIPVGKYGEV------------DVSF 130 (382)
T ss_dssp HHHHHHHHGG----GCCEEEEETTCCHHHHHHHHHHTT----------TTCEEEEECBCTTSCB------------CHHH
T ss_pred HHHHHhhccC----CCCEEEECCCcchHHHHHHHHHHh----------CCcEEEEeccCCCCcc------------CHHH
Confidence 9988721100 567899999998876333221110 1122344544332222 7899
Q ss_pred HHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--
Q psy14484 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC-- 268 (430)
Q Consensus 191 le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~-- 268 (430)
|+++++ +++++|++++ ++|++|...+ +++|.++|++||++ |+||+|+ ++... .....+ .+|+++
T Consensus 131 l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~di~~~s 196 (382)
T 4eb5_A 131 IDQKLR---DDTILVSVQH-ANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE--VDVEKI--GADMLTIS 196 (382)
T ss_dssp HHHHCC---TTEEEEECCS-BCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC--CCHHHH--TCSEEEEE
T ss_pred HHHHhc---CCCeEEEEec-cCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc--cCcccc--CCCEEEee
Confidence 998885 4688899998 9999998877 89999999999999 9999997 54321 122222 357665
Q ss_pred eecccCCCccccEEEEEcHHH-HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHH
Q psy14484 269 LSKGITGGYLPLSLVMTTDKI-YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKAL 345 (430)
Q Consensus 269 ~sK~l~gG~~~ig~~~~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l 345 (430)
++|.++. .++|+++++++. +..+.. +... .......+.+...+.++.++++.+.+ +...++++++.+++.+.|
T Consensus 197 ~sK~~g~--~g~G~~~~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 272 (382)
T 4eb5_A 197 SNDIYGP--KGVGALWIRKEAKLQPVIL-GGGQ-ENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNV 272 (382)
T ss_dssp TGGGTCC--SSCEEEEEETTCCCCCSSC-SSCT-GGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhcCC--CceEEEEEccccccCceec-CCCc-cccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 5696442 248999988763 211111 0000 00112234466666666677776543 345566777777787777
Q ss_pred HchhcCCCeeeEee----cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------
Q psy14484 346 TSLITHPKIINFRQ----KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 397 (430)
Q Consensus 346 ~~l~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------ 397 (430)
+++ +.+..... .+.++.+.+. .. . ..++.+.|.++||.+.++
T Consensus 273 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~----~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~ 342 (382)
T 4eb5_A 273 LKI---EESYLNGHPEKRLPNNVNVRFS-YI----E--GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEA 342 (382)
T ss_dssp TTS---TTEEECSCSSSBCTTEEEEEET-TS----C--HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHH
T ss_pred hhC---CCeEEeCCcccCCCCEEEEEeC-Cc----C--HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhcc
Confidence 654 33222211 2556666654 21 1 357888898999998764
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+|++++..++++++++++++|++++.++
T Consensus 343 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (382)
T 4eb5_A 343 HGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3689999998899999999999999988754
No 139
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.94 E-value=2.5e-25 Score=215.10 Aligned_cols=337 Identities=12% Similarity=0.104 Sum_probs=223.7
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC-eEEEcCCchHHHHH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEV 109 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgteA~~~ 109 (430)
.+|+.|+|..+. ++ .+|++++++.+++.. +. .....+...++++.+++.++.+.+ ++++++||++|++.
T Consensus 16 ~~~~~~~~~~g~-----~~-~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 85 (393)
T 2huf_A 16 VTPNKLLMGPGP-----SN-APQRVLDAMSRPILG--HL--HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEA 85 (393)
T ss_dssp CCCCCEECSSSC-----CC-CCHHHHHHTTSCCCC--TT--SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHH
T ss_pred CCCCeEEecCCC-----CC-CCHHHHHHHHhhhcc--CC--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHH
Confidence 456777664432 22 579999988776532 11 112345678999999999987665 89999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++++.. +++.|++.+++||+....... .......+.++.+..... |++
T Consensus 86 ~~~~~~~--------~gd~vl~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~ 134 (393)
T 2huf_A 86 TLCNLLE--------DGDVILIGHTGHWGDRSADMA-----------TRYGADVRVVKSKVGQSL------------SLD 134 (393)
T ss_dssp HHHHHCC--------TTCEEEEEESSHHHHHHHHHH-----------HHTTCEEEEEECCTTCCC------------CHH
T ss_pred HHHHHhC--------CCCEEEEECCCcchHHHHHHH-----------HHcCCeeEEEeCCCCCCC------------CHH
Confidence 9998743 567899999999874211110 001122344444332222 789
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 269 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~ 269 (430)
+|++++++. ++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+++ ++.. ..... ...+|++++
T Consensus 135 ~l~~~i~~~--~~~~v~~~~-~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~ 202 (393)
T 2huf_A 135 EIRDALLIH--KPSVLFLTQ-GDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMD--RWEIDAMYT 202 (393)
T ss_dssp HHHHHHHHH--CCSEEEEES-EETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCSEEEC
T ss_pred HHHHHHhcc--CCcEEEEEc-cCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchh--hcCccEEEE
Confidence 999999741 567788888 8999998777 8999999999999999999986 4432 12222 234677754
Q ss_pred --ecccCCCccccEEEEEcHHHHHhhhccCC-ccccc---------------ccCCC-CCCHHHHHHHHHHHHHHhh---
Q psy14484 270 --SKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFL---------------HSHSY-SGNPLACCAALATLEIFNK--- 327 (430)
Q Consensus 270 --sK~l~gG~~~ig~~~~~~~~~~~~~~~~~-~~~~~---------------~~~t~-~~~~~~~~aa~~~l~~~~~--- 327 (430)
+|+++|+ .++|++++++++++.+..... ..++. ...++ +.+..+++++.++++.+.+
T Consensus 203 s~sK~l~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 203 GSQKVLGAP-PGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp CSSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCCcccccC-CCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 5988764 356999999998887754100 01111 01122 3455666666667776543
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeEe-ecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCE
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINFR-QKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNT 400 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~ 400 (430)
++..++++++.+++.+.|+++ ......... ..+.++.+.+. .+.. +.++.+.|.++ ||.+.++ .++
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~L~~~~gi~v~~g~~~~~~~~ 354 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVP-QGVD-----WLKAAQYAMKTYLVEISGGLGPTAGQV 354 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECC-TTCC-----HHHHHHHHHHHHCEECBCCCGGGTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcC-CCCC-----HHHHHHHHHHhCCEEEecCcccccCCE
Confidence 345677888888888888776 333221111 12346666654 3211 35788888865 9999874 378
Q ss_pred EEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 401 VYLMP-PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~-~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+|+++ ++..+++++++++++|+++++++
T Consensus 355 ~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 355 FRIGLMGQNATTERVDRVLQVFQEAVAAV 383 (393)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccCcCCHHHHHHHHHHHHHHHHHc
Confidence 99999 55568999999999999998764
No 140
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=1.5e-25 Score=213.11 Aligned_cols=319 Identities=13% Similarity=0.016 Sum_probs=215.1
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 130 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl 130 (430)
.+|++++++.+++.. + ......+...++++.+++.++.+++++++++||++|++.+++.+.. ++++|+
T Consensus 12 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~--------~gd~vl 79 (352)
T 1iug_A 12 LHPKALEALARPQLH--H--RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFA--------PGERVL 79 (352)
T ss_dssp CCHHHHHHHHSCCCC--T--TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCC--------TTCEEE
T ss_pred CCHHHHHHhccCCCC--c--cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccC--------CCCeEE
Confidence 579999998876542 1 1111224567899999999987777999999999999999998753 567899
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPL 210 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (430)
+.+++|++....... .........++.+..... |+++|++ +++++|++++
T Consensus 80 ~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~~l~~------~~~~~v~~~~- 129 (352)
T 1iug_A 80 VPVYGKFSERFYEIA-----------LEAGLVVERLDYPYGDTP------------RPEDVAK------EGYAGLLLVH- 129 (352)
T ss_dssp EEECSHHHHHHHHHH-----------HHTTCEEEEEECCTTCCC------------CTTTSCC------SSCSEEEEES-
T ss_pred EEeCCchhHHHHHHH-----------HHcCCceEEEeCCCCCCC------------CHHHHhc------cCCcEEEEEE-
Confidence 999999886411110 001122344444332211 4555544 3467788888
Q ss_pred cccCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEEEEc
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNY--NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTT 286 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~--gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~ 286 (430)
++|++|.+.+ +++|.++|++| |+++|+||+|+ ++.. .+....+ .+|+++ ++|++.++ .++|+++++
T Consensus 130 ~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~~~~~~--~~d~~~~s~~K~~~~~-~g~G~~~~~ 199 (352)
T 1iug_A 130 SETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVG--EVALEAM--GVDAAASGSQKGLMCP-PGLGFVALS 199 (352)
T ss_dssp EETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTB--CCCSGGG--TCSEEEEESSSTTCCC-SCEEEEEEC
T ss_pred ecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCc--ceecccc--CeeEEEecCcccccCC-CceeEEEEC
Confidence 9999998877 99999999999 99999999996 4332 1222222 367665 55977765 468999999
Q ss_pred HHHHHhhhcc------C-Ccccc-cccCCCCCCHHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHchhcCCCeee
Q psy14484 287 DKIYNSIYYK------N-NINIF-LHSHSYSGNPLACCAALATLEIFNKD--NILQRISQDMKKITKALTSLITHPKIIN 356 (430)
Q Consensus 287 ~~~~~~~~~~------~-~~~~~-~~~~t~~~~~~~~~aa~~~l~~~~~~--~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 356 (430)
+++++.+... . ..... ....+++.+..++.++.++++.+++. +..++++++.+++.+.|+++ .......
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 278 (352)
T 1iug_A 200 PRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPK 278 (352)
T ss_dssp HHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCS
T ss_pred HHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccccc
Confidence 9876542100 0 00000 01223455777777777888876543 45667777888888888765 2221111
Q ss_pred EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 357 FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 357 ~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
...+.++++.+. .+.. +.++.+.|.++||.+.++ .+++|++++..++++++++++++|++++.+++
T Consensus 279 -~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 279 -RFSPAVAAFYLP-EGVP-----YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp -SBCTTCEEEECC-TTCC-----HHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred -ccCCeEEEEEcC-CCCC-----HHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 024667777665 3211 367899999999999875 37899999988999999999999999998764
No 141
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=1.8e-25 Score=217.68 Aligned_cols=330 Identities=10% Similarity=0.034 Sum_probs=218.8
Q ss_pred cCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEE-EcCCchHHHHHHHHHHHHhhhhcCCCC
Q psy14484 47 LFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCF-YGSDGASAVEVALKMSFHYWYNKGFLN 125 (430)
Q Consensus 47 ~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~-~~~sgteA~~~al~~~~~~~~~~g~~~ 125 (430)
.++.+++.+.+++.+++.+...........+...++++++++.++...+.++ +++||++|++.+++.+.. +
T Consensus 14 ~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~--------~ 85 (416)
T 3isl_A 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIE--------P 85 (416)
T ss_dssp ECSSSSCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCC--------T
T ss_pred eecCCCcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcC--------C
Confidence 3555554555555555544221111112235678899999999987777665 889999999999997743 6
Q ss_pred CcEEEEEcCCCCCcchh-hhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEE
Q psy14484 126 KKKFICLQNSYHGETLG-ALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 204 (430)
++.|++.+++||+.... ..... ......++.+..... |+++|++++++ +++++
T Consensus 86 gd~Vl~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~~~~~------------d~~~l~~~i~~--~~~~~ 139 (416)
T 3isl_A 86 EDDVLIPIYGRFGYLLTEIAERY------------GANVHMLECEWGTVF------------DPEDIIREIKK--VKPKI 139 (416)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHT------------TCEEEEEECCTTCCC------------CHHHHHHHHHH--HCCSE
T ss_pred CCEEEEecCCcccHHHHHHHHhc------------CCeeEEEecCCCCCC------------CHHHHHHHHhh--CCCcE
Confidence 78999999999873211 11111 123345555433322 88999999974 25688
Q ss_pred EEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCccccEE
Q psy14484 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSL 282 (430)
Q Consensus 205 vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~ 282 (430)
|++++ ++|++|...+ +++|.++|++||+++|+||+|+ ++.. ..... ...+|++++ +|++.++ .++|+
T Consensus 140 v~~~~-~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~l~g~-~g~g~ 208 (416)
T 3isl_A 140 VAMVH-GETSTGRIHP----LKAIGEACRTEDALFIVDAVAT-IGGC--EVKVD--EWKIDAAIGGTQKCLSVP-SGMAP 208 (416)
T ss_dssp EEEES-EETTTTEECC----CHHHHHHHHHTTCEEEEECTTT-TTTS--CCCTT--TTTCSEEECCSSSTTCCC-SSEEE
T ss_pred EEEEc-cCCCCceecC----HHHHHHHHHHcCCEEEEECCcc-ccCC--Ccchh--hcCCCEEEecCccccCCC-CCeEE
Confidence 88888 9999998877 9999999999999999999987 3322 11222 234677754 5887776 57999
Q ss_pred EEEcHHHHHhhhccC-------------------Ccc-------------cccccCCCCCCHHHHHHHHHHHHHHhh---
Q psy14484 283 VMTTDKIYNSIYYKN-------------------NIN-------------IFLHSHSYSGNPLACCAALATLEIFNK--- 327 (430)
Q Consensus 283 ~~~~~~~~~~~~~~~-------------------~~~-------------~~~~~~t~~~~~~~~~aa~~~l~~~~~--- 327 (430)
+++++++++.+.... ... ........+.+..++.++.++++.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~ 288 (416)
T 3isl_A 209 ITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGL 288 (416)
T ss_dssp EEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred EEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhH
Confidence 999999887765300 000 000111224466777777777776544
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCE
Q psy14484 328 DNILQRISQDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNT 400 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~ 400 (430)
++..++++++.+++.+.|+++ ........ ...+.++.+.+. .+.. +.++.+.|.++ ||.+.++ +++
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~l~~~L~~~~gi~v~~g~~~~~~~~ 361 (416)
T 3isl_A 289 ETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIP-GGID-----GESVRDMLLAQFGIEIASSFGPLAGKI 361 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECC-TTCC-----HHHHHHHHHHHHCEECBCCCSTTTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCC-CCCC-----HHHHHHHHHHhCCEEEecCCCCCCCCE
Confidence 356777888888888888875 33222111 122566667664 3211 36789999887 9999864 479
Q ss_pred EEEeCCCCCCHHH-HHHHHHHHHHHHHHh
Q psy14484 401 VYLMPPYILNKNE-IQHMTSAIFQTFNEV 428 (430)
Q Consensus 401 lR~~~~~~~t~e~-i~~~~~~l~~~l~~~ 428 (430)
+|++++...++++ +++++++|++++.++
T Consensus 362 iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 362 WRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred EEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 9999977777766 999999999998764
No 142
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.94 E-value=6e-25 Score=215.21 Aligned_cols=358 Identities=9% Similarity=0.060 Sum_probs=212.7
Q ss_pred CCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC-----CCHHHHHHHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 31 VSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-----THKPVIKLSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 31 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
.++..|||+.++. +.+|++++++.+++..........+ ..+...++++++++.++.+++++++++||++
T Consensus 16 ~~~~~~Ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~ 89 (432)
T 3a9z_A 16 PNRKVYMDYNATT------PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTE 89 (432)
T ss_dssp --CCEECBTTTCC------CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHH
T ss_pred CCCcEEeeCCccC------CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHH
Confidence 4677889876542 5789999999998876321111112 1234578999999999877789999999999
Q ss_pred HHHHHHHHHHHhhhh-cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhc----cCCCeeEeCCCC-CCCCCCCCC
Q psy14484 106 AVEVALKMSFHYWYN-KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTS----LLNKTYIITTPD-SRNINKGNS 179 (430)
Q Consensus 106 A~~~al~~~~~~~~~-~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~ 179 (430)
|++.+++.++..... ..+ +++.|+++.|+||++.........+......+.. ...++..++.+. +...
T Consensus 90 a~~~~~~~~~~~~~~~~~~-~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~----- 163 (432)
T 3a9z_A 90 SNNLVIHSTVRCFHEQQTL-QGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQV----- 163 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHH-C------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSC-----
T ss_pred HHHHHHHHHHhhhhhcccc-CCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCc-----
Confidence 999999987521000 000 4578999999999863221111111111111111 123445555442 2222
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC----------CEEEEeccccCCC
Q psy14484 180 ANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN----------IHLIADEIAVGCG 249 (430)
Q Consensus 180 ~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g----------i~li~DEv~~g~g 249 (430)
|+++|+++++ +++++|++++ ++|++|.+.+ +++|.++|+++| +++|+||+|. ++
T Consensus 164 -------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~-~~ 227 (432)
T 3a9z_A 164 -------EVEDILAAVR---PTTCLVTIML-ANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQA-LG 227 (432)
T ss_dssp -------CHHHHHHTCC---TTEEEEECCS-BCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-TT
T ss_pred -------CHHHHHHhcc---CCceEEEEEC-cccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhh-hC
Confidence 7889988885 4689999999 9999998887 899999999999 9999999995 54
Q ss_pred CcccccccccCCCCCceee--eecccCCCccccEEEEEcHHH-HHhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHH
Q psy14484 250 RTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLVMTTDKI-YNSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIF 325 (430)
Q Consensus 250 ~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~-~~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 325 (430)
... .... ...+|+++ ++|.+ | .++|+++++++. ...+...- .........+++.++.+++++.++++.+
T Consensus 228 ~~~--~~~~--~~~~d~~~~s~~K~~--g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~ 300 (432)
T 3a9z_A 228 KRR--VDVE--DLGVDFLTIVGHKFY--G-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV 300 (432)
T ss_dssp TSC--CCHH--HHCCSEEEEEGGGTT--C-CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH
T ss_pred Ccc--cChh--hcCCCEEEEehhHhc--C-CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH
Confidence 321 1111 22467765 58975 3 469999999765 22222100 0000011223456777777777788765
Q ss_pred hh--cCHHHHHHHHHHHHHHHHHchhcCCCe--e---eEeecceEEEEEEeecCCccchhHHHHHHHHHH----HCCcEE
Q psy14484 326 NK--DNILQRISQDMKKITKALTSLITHPKI--I---NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL----KNELLL 394 (430)
Q Consensus 326 ~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~--~---~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~----~~Gv~~ 394 (430)
++ ++..++++++.+++.+.|+++...... . .....+.+..+.+. .... . ...+.+.+. +.|+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~i~~~~G~~~ 375 (432)
T 3a9z_A 301 SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQ-GSQL-R---GYMVLAQCQTLLASVGASC 375 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEEC-STTC-C---HHHHHHHCSSEECBSSCGG
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeC-CCCC-c---HHHHHHHhcCeEEeccccc
Confidence 43 456677888888888888775221111 0 01233556667666 4111 1 133444331 112211
Q ss_pred ee-------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 395 RP-------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 395 ~~-------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+ ..+++||+++..+|++++++++++|++++.++
T Consensus 376 ~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~ 428 (432)
T 3a9z_A 376 HSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL 428 (432)
T ss_dssp GGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 11 23789999999999999999999999998764
No 143
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=1.1e-25 Score=214.06 Aligned_cols=320 Identities=11% Similarity=0.067 Sum_probs=216.4
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC--CCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~ 128 (430)
.+|+|++++.+++.. + ......+...++++++++.++.+ .+++++++||++|+..+++.++ + ++
T Consensus 11 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~---------~-d~ 76 (353)
T 2yrr_A 11 IPERVQKALLRPMRG--H--LDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD---------R-GP 76 (353)
T ss_dssp CCHHHHGGGGSCCCC--T--TCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS---------C-CC
T ss_pred CCHHHHHHHhccccc--c--cCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc---------C-Cc
Confidence 578999988876543 1 10112245788999999999754 5789999999999999988663 4 67
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
|++.+++||++...... .........++.+..... |+++|++.++++ ++++|+++
T Consensus 77 vl~~~~~~~~~~~~~~~-----------~~~g~~~~~v~~~~~~~~------------d~~~l~~~l~~~--~~~~v~~~ 131 (353)
T 2yrr_A 77 VLVLVNGAFSQRVAEMA-----------ALHGLDPEVLDFPPGEPV------------DPEAVARALKRR--RYRMVALV 131 (353)
T ss_dssp EEEEECSHHHHHHHHHH-----------HHTTCCEEEEECCTTSCC------------CHHHHHHHHHHS--CCSEEEEE
T ss_pred EEEEcCCCchHHHHHHH-----------HHcCCceEEEeCCCCCCC------------CHHHHHHHHHhC--CCCEEEEE
Confidence 89989888875111000 011223345555432222 889999999742 56788888
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~~~~~ 286 (430)
+ ++|++|...+ +++|.++|++||+++|+||+|+ ++... .....+ .+|++++ +|.++++ .++|+++++
T Consensus 132 ~-~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~G~~~~~ 200 (353)
T 2yrr_A 132 H-GETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDYAFTGSQKCLSAP-PGLAPIAAS 200 (353)
T ss_dssp S-EETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEECCTTSTTCCC-SSCEEEEEC
T ss_pred c-cCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceEEEecCcccccCC-CceEEEEEC
Confidence 8 9999998877 8999999999999999999995 65432 222222 3577764 5988765 368999999
Q ss_pred HHHHHhhhc-cCCc-------ccc-cccCCCCCCHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 287 DKIYNSIYY-KNNI-------NIF-LHSHSYSGNPLACCAALATLEIFNKD---NILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 287 ~~~~~~~~~-~~~~-------~~~-~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
+++++.+.. .+.. ... .....++.+..++.++.++++.+.+. +..++++++.+++.+.|+++ .....
T Consensus 201 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 279 (353)
T 2yrr_A 201 LEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY 279 (353)
T ss_dssp HHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES
T ss_pred HHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 998876641 0000 000 01123345677777777778766433 45677788888888888765 32221
Q ss_pred eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHH-HHHHHHHHHHHH
Q psy14484 355 INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQ-HMTSAIFQTFNE 427 (430)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~-~~~~~l~~~l~~ 427 (430)
......+.++++.+. .+.. +.++.+.|.++||.+.++ ++.+|++++...++++++ +++++|++++++
T Consensus 280 ~~~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 280 PKASPLPTVLVVRPP-EGVD-----ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp CSSSBCTTEEEEECC-TTCC-----HHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred cCccCCCeEEEEECC-CCCC-----HHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 111113555566654 3211 367999999999999875 378999998888999999 999999998764
No 144
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.94 E-value=1.8e-25 Score=212.98 Aligned_cols=325 Identities=13% Similarity=0.114 Sum_probs=205.7
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
..++||.++ ..++.+|++++++.+++.. + .......+...++++++++.++ ...++++++||++|++.++++
T Consensus 7 ~~~id~~~~----~~~~~~~~v~~a~~~~~~~--~-~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 7 PPALGFSSD----NIAGASPEVAQALVKHSSG--Q-AGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSA 78 (356)
T ss_dssp CCCCBCSCG----GGCCCCHHHHHHHHHTTSS--C-CCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHT
T ss_pred CceEeeccC----CccCCCHHHHHHHHhhccC--c-ccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHH
Confidence 468899876 3457899999999987532 1 1223346778899999999997 444599999999999999998
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcchhh--hccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETLGA--LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
++. +++.|++.+++| +..... ..... .......++.+ +.. .|+++|
T Consensus 79 ~~~--------~gd~vi~~~~~~-~~~~~~~~~~~~~----------~g~~~~~v~~~-~~~------------~d~~~l 126 (356)
T 1v72_A 79 MTP--------PWGNIYCHPASH-INNDECGAPEFFS----------NGAKLMTVDGP-AAK------------LDIVRL 126 (356)
T ss_dssp SCC--------TTEEEEECTTSH-HHHSSTTHHHHHT----------TSCEEEECCCG-GGC------------CCHHHH
T ss_pred hcC--------CCCEEEEcCccc-hhhhhchHHHHHh----------CCcEEEEecCC-CCe------------EcHHHH
Confidence 653 456777766544 332211 11110 01122333322 111 178999
Q ss_pred HH-HHHhC----CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC--cccccccccCC--C
Q psy14484 192 EI-LLKKN----HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR--TGKFFACEHAE--I 262 (430)
Q Consensus 192 e~-~l~~~----~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~--~g~~~~~~~~~--~ 262 (430)
++ ++++. ..++++|++++ +++ +| ..++.+.+++|.++|++||+++|+||+|..+.. .|. .....+ .
T Consensus 127 ~~~~i~~~~~~~~~~~~~v~~~~-~~~-tG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~ 201 (356)
T 1v72_A 127 RERTREKVGDVHTTQPACVSITQ-ATE-VG-SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC--SPAEMTWKA 201 (356)
T ss_dssp HHHTTSSTTCTTSCEEEEEEEES-SCT-TS-CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC--CTTTTTGGG
T ss_pred HHHhhhcchhhccCCceEEEEEc-CCC-CC-ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC--CHHHhhhhh
Confidence 98 88631 12689999998 765 77 567889999999999999999999999863211 111 111111 1
Q ss_pred CCceee--eecccCCCccccE--EEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhc---CHHHHHH
Q psy14484 263 WPDFLC--LSKGITGGYLPLS--LVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD---NILQRIS 335 (430)
Q Consensus 263 ~~d~~~--~sK~l~gG~~~ig--~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~ 335 (430)
..|+++ ++|. | .|+| ++++++++++.+.. .+ .+.++.... +..++.++++.++++ +..++.+
T Consensus 202 ~~d~~~~s~sK~---g-~~~G~g~~~~~~~~~~~~~~---~~--~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~ 270 (356)
T 1v72_A 202 GVDALSFGATKN---G-VLAAEAIVLFNTSLATEMSY---RR--KRAGHLSSK--MRFLSAQIDAYLTDDLWLRNARKAN 270 (356)
T ss_dssp TCCEEEECCGGG---T-CSSCEEEEESSGGGHHHHHH---HH--HHTTCCCSS--THHHHHHHHHHTSTTHHHHHHHHHH
T ss_pred cCCEEEEecccC---C-CcCccEEEEECHHHHhhHHH---Hh--hccCchhhh--HHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 345554 6687 3 3666 77778888776543 00 011222211 122233344444332 2345667
Q ss_pred HHHHHHHHHHHchhcCCCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCH
Q psy14484 336 QDMKKITKALTSLITHPKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNK 411 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~ 411 (430)
++.+++.+.|+++ +++... +..+.++++.+. .++++.|.++||.+.++ ++++|+++++.+++
T Consensus 271 ~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~ 336 (356)
T 1v72_A 271 AAAQRLAQGLEGL---GGVEVLGGTEANILFCRLD-----------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTA 336 (356)
T ss_dssp HHHHHHHHHHTTC---TTEEEESCCCSSEEEEEEC-----------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCH
T ss_pred HHHHHHHHHHhhC---CCcEEccCCCccEEEEEcC-----------HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCH
Confidence 7777777777654 333222 334555555544 35888899999999864 47899999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy14484 412 NEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 412 e~i~~~~~~l~~~l~~~ 428 (430)
+++++++++|++++++.
T Consensus 337 ~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 337 EDVDHLLNQVRLAADRT 353 (356)
T ss_dssp HHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999887653
No 145
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.93 E-value=4e-25 Score=217.33 Aligned_cols=344 Identities=10% Similarity=0.022 Sum_probs=208.3
Q ss_pred CCCE-EEecccccccccCCCCCHHHHHHHHHHHhhcc----ccccCCCCCHHHHHHHHHHHhhc-CCC-----CCeEEE-
Q psy14484 32 SGKR-YLDAISSWWVNLFGHSNSYINKALKNQLNKLE----HVMLSNLTHKPVIKLSEKLSSLT-QYK-----LGHCFY- 99 (430)
Q Consensus 32 ~g~~-~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~-~~~-----~~~v~~- 99 (430)
|++. .+||..|... -..++|.+.+++.++..... .....+.......++++.+++.+ +.. +++|++
T Consensus 46 ~~~~~~i~l~~g~~~--d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~ 123 (448)
T 3meb_A 46 DTNPKKVNLGVGAYR--DESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRIASC 123 (448)
T ss_dssp CCCTTCEEESSCCCC--CTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred CCCCCeEEeeccccc--CCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCccccCcCcEEEE
Confidence 4443 6888776321 22345555555555532221 11111112222344555555544 434 579999
Q ss_pred -cCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCC--CCCC
Q psy14484 100 -GSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDS--RNIN 175 (430)
Q Consensus 100 -~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 175 (430)
|+||++|++.+..+..... +++.|++.+++|+++....... ..........+++ +.. +..
T Consensus 124 ~t~ggt~al~l~~~~~~~~~------~gd~Vlv~~p~~~~~~~~~~~~---------~~~~G~~v~~~~~~~~~~~~~~- 187 (448)
T 3meb_A 124 QSLSGTGSLHIGFEFLHLWM------PKAEFYMPSTTWPNHYGIYDKV---------FNKLKVPYKEYTYLRKDGELEI- 187 (448)
T ss_dssp EESHHHHHHHHHHHHHHHHC------TTCCEEEESSCCTHHHHHHHHH---------HCTTTSCCEEECCBCTTSCSSB-
T ss_pred ECCcHHHHHHHHHHHHHHhC------CCCEEEECCCCCHhHHHHHHhh---------HHhCCCeEEEEeccccccCCCc-
Confidence 9999999998655443332 5678999999998774433300 0011123344544 221 222
Q ss_pred CCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--
Q psy14484 176 KGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK-- 253 (430)
Q Consensus 176 ~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~-- 253 (430)
|+++|++.+++.+.++.++++.. ++|++| ..++.+.+++|.++|++||+++|+||+|.++++.+.
T Consensus 188 -----------d~e~l~~~l~~~~~~~~~v~~~~-p~NPtG-~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~ 254 (448)
T 3meb_A 188 -----------DFSNTKKDIQSAPEKSIFLFHAC-AHNPSG-IDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEA 254 (448)
T ss_dssp -----------CHHHHHHHHHHSCTTCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHH
T ss_pred -----------CHHHHHHHHHhCCCCcEEEEeCC-CCCCCC-cCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCccc
Confidence 88999999987545577777777 888888 557788899999999999999999999998876541
Q ss_pred -ccccccC-CCCCc---eeeeecccCC-CccccEEE--EE--------c-H----HHHHhhhccCCcccccccCCCCCCH
Q psy14484 254 -FFACEHA-EIWPD---FLCLSKGITG-GYLPLSLV--MT--------T-D----KIYNSIYYKNNINIFLHSHSYSGNP 312 (430)
Q Consensus 254 -~~~~~~~-~~~~d---~~~~sK~l~g-G~~~ig~~--~~--------~-~----~~~~~~~~~~~~~~~~~~~t~~~~~ 312 (430)
......+ +..++ +.+|||.++. | +|+|++ ++ + + ++.+.+.. .....+.+.+.
T Consensus 255 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~ 327 (448)
T 3meb_A 255 DAFAVRMFVDAGVEVLVAQSFSKNFGLYG-ERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL------QIRKTWSMSAI 327 (448)
T ss_dssp HTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH------HHHTTTSSCCH
T ss_pred CchhHHHHhhcCCcEEEEecccccCCCcc-ccceeeeeeeccccccccCCHHHHHHHHHHHHH------HHhcccCCccH
Confidence 1122111 22344 4579999984 6 899998 66 4 4 45544443 22344555667
Q ss_pred HHHHHHHHHHHHHh--------hcCHHHHHHHHHHHHHHHHHchhcCCC------eeeEeecceEEEEEEeecCCccchh
Q psy14484 313 LACCAALATLEIFN--------KDNILQRISQDMKKITKALTSLITHPK------IINFRQKGMIWAFDVIIEDPEQIET 378 (430)
Q Consensus 313 ~~~~aa~~~l~~~~--------~~~~~~~~~~~~~~l~~~l~~l~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~ 378 (430)
+++.++.++|+..+ .+...++++++.+++.+.|+++ ..+. +....+.+.++.+.-. +
T Consensus 328 ~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~-~------- 398 (448)
T 3meb_A 328 HGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR-KTPGPGSKGTWDHILTAIGMFTFTGL-T------- 398 (448)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCSTTTCCCTHHHHCCSSEEECCC-C-------
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCcccccceeCCCceEEEecCC-C-------
Confidence 77777766664211 1344566777777787877765 2222 2223344444443211 1
Q ss_pred HHHHHHHHH-HHCCcEEeecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 379 FSKKFFVAA-LKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 379 ~a~~~~~~l-~~~Gv~~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++..+ .++||.+.|+.+ ||+++ ..++++|++++++|++++.+
T Consensus 399 --~~~~~~ll~~~gV~v~~G~g--Ris~a-~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 399 --PEHVDYLKEKWSIYLVKAGG--RMSMC-GLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp --HHHHHHHHHHHCEEECSGGG--EEEGG-GCCTTTHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCEEEeCCCc--EEEEe-cCCHHHHHHHHHHHHHHHHh
Confidence 2355555 567999998543 88775 44777799999999999875
No 146
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.93 E-value=3.2e-24 Score=214.67 Aligned_cols=331 Identities=10% Similarity=-0.005 Sum_probs=211.9
Q ss_pred CCHHHHHHHHHHHhhcccccc-CCCC----CHHHHHHHHHHHhhcCCCC--CeE--EEcCCchHHHHHHHHHHHHhhhh-
Q psy14484 51 SNSYINKALKNQLNKLEHVML-SNLT----HKPVIKLSEKLSSLTQYKL--GHC--FYGSDGASAVEVALKMSFHYWYN- 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~-~~~~----~~~~~~l~~~l~~~~~~~~--~~v--~~~~sgteA~~~al~~~~~~~~~- 120 (430)
+++.+.+++.+++........ .... .....++++++++.++... +++ ++++||++|++.++++++.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~ 187 (514)
T 3mad_A 108 GDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARAT 187 (514)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhh
Confidence 568888888777754322111 1111 2444667788898886543 577 99999999999999999875322
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
+| .+++.|++..++|+++...... ...+++.++.+..++. |+++|+++++ +
T Consensus 188 ~g-~~~d~Vi~~~~~~~~~~~~~~~-------------~G~~v~~v~~~~~~~~------------d~~~Le~~i~---~ 238 (514)
T 3mad_A 188 KG-ITAPEAVVPVSAHAAFDKAAQY-------------FGIKLVRTPLDADYRA------------DVAAMREAIT---P 238 (514)
T ss_dssp HC-CSSCEEEEETTSCTHHHHHHHH-------------HTCEEEEECBCTTSCB------------CHHHHHHHCC---T
T ss_pred cC-CCCCeEEEeCccchHHHHHHHH-------------cCCeeEEeeeCCCCCC------------CHHHHHHHhc---c
Confidence 22 2347899999888875333222 1223455555443333 8999999985 4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC-----ccc---ccccccCCCCCceee--ee
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR-----TGK---FFACEHAEIWPDFLC--LS 270 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~-----~g~---~~~~~~~~~~~d~~~--~s 270 (430)
++++|++++ +++++|.+.+ +++|.++|++||++||+||+|+++.. .|. .+.....++ |+++ ++
T Consensus 239 ~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~--d~~~~s~~ 311 (514)
T 3mad_A 239 NTVVVAGSA-PGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGV--TSVSADTH 311 (514)
T ss_dssp TEEEEEEET-TCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTC--CEEEECTT
T ss_pred CCEEEEEeC-CCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCC--cEEEECch
Confidence 789999999 9999998877 99999999999999999999987632 222 223333344 5554 55
Q ss_pred cccCCCccccEEEEEcHHHHHhhhcc---CCcccccccCCC--CCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHH
Q psy14484 271 KGITGGYLPLSLVMTTDKIYNSIYYK---NNINIFLHSHSY--SGNPLACCAALATLEIFNK---DNILQRISQDMKKIT 342 (430)
Q Consensus 271 K~l~gG~~~ig~~~~~~~~~~~~~~~---~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~ 342 (430)
|.+.++ .++|+++++++........ ..........++ +.+.....+..++++.+.. ++..+++.++++++.
T Consensus 312 K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~ 390 (514)
T 3mad_A 312 KYGYGA-KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLK 390 (514)
T ss_dssp TTTCCC-SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCC-CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 987776 6899999987665432210 000000001111 1122223334444444332 456777888888888
Q ss_pred HHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--CCEEEEeCC-CCCCHHHHHHHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--GNTVYLMPP-YILNKNEIQHMTS 419 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--~~~lR~~~~-~~~t~e~i~~~~~ 419 (430)
+.|+++. .+........++.+... . . . +.++.+.|.++||.+... ++.+|++++ ...++++++++++
T Consensus 391 ~~L~~~~---g~~~~~~~~~~~~~~~~-~-~--~---~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~~l~ 460 (514)
T 3mad_A 391 AGVRAIP---SLKILGDPLWVIAVASD-E-L--N---IYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVDRFLA 460 (514)
T ss_dssp HHHHTST---TCEESSCCSSEEEEECS-S-S--C---HHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHHHHHH
T ss_pred HHHhhCC---CeEEeCCCeEEEEEeCC-C-C--C---HHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHHHHHH
Confidence 8888753 22222122334444333 1 1 1 367999999999987433 478999987 4456799999999
Q ss_pred HHHHHHHHh
Q psy14484 420 AIFQTFNEV 428 (430)
Q Consensus 420 ~l~~~l~~~ 428 (430)
+|++++.++
T Consensus 461 ~L~~~l~~~ 469 (514)
T 3mad_A 461 DLQDAVAQV 469 (514)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
No 147
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.93 E-value=3e-25 Score=219.62 Aligned_cols=355 Identities=12% Similarity=0.106 Sum_probs=208.1
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
.|+.||||.++.+. |+|++++.+++.... ..+...+...++++++++.+ +.++++|++||++|++.|+
T Consensus 39 ~~~~ylD~~~~~~~-------~~v~~a~~~~l~~~~---~~y~~~~~~~~l~~~la~~~--~~~~v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 39 SEDVFIDLLTDSGT-------GAVTQSMQAAMMRGD---EAYSGSRSYYALAESVKNIF--GYQYTIPTHQGRGAEQIYI 106 (467)
T ss_dssp GGGCSEECSCCSSC-------SCCCHHHHHHTTSCC---CCSSSCHHHHHHHHHHHHHH--CCSEEEEEC--CCSHHHHH
T ss_pred CCCeeEecccCCCc-------HHHHHHHHHHhccCc---ceeccCchhHHHHHHHHHHh--CcCcEEEcCCcHHHHHHHH
Confidence 36789999877543 888899888765422 11234566788999999998 4579999999999999999
Q ss_pred HHHHHhh-hhcCCCCCcEEEEEcCCCCCcchhhhcc-CCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 112 KMSFHYW-YNKGFLNKKKFICLQNSYHGETLGALAV-TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 112 ~~~~~~~-~~~g~~~~~~vl~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
++++..+ ..+|.++++.|++. .||+.+...... .+..... ......... ....|.... .|++
T Consensus 107 ~~~~~~~~~~~G~~~~d~Ii~~--~~h~~t~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~------------~d~~ 170 (467)
T 2oqx_A 107 PVLIKKREQEKGLDRSKMVAFS--NYFFDTTQGHSQINGCTVRN-VYIKEAFDT-GVRYDFKGN------------FDLE 170 (467)
T ss_dssp HHHHHHHHHHHCCCTTTCEEEE--SSCCHHHHHHHHHTTCEEEE-CBCTTTTCT-TSCCTTTTC------------BCHH
T ss_pred HHHhccccccCCCCccceEEec--ccccccchhhhhccCcceee-ccccccccC-CCCCCccCC------------cCHH
Confidence 9987631 11121111556654 578654322211 1111000 000000000 000011111 1889
Q ss_pred HHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----------CCCccccc-cc
Q psy14484 190 DLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG----------CGRTGKFF-AC 257 (430)
Q Consensus 190 ~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g----------~g~~g~~~-~~ 257 (430)
+|+++++++. +++++|++++ ++|++|..+++.+++++|.++|++||++||+|++|.. .+..|... .+
T Consensus 171 ~Le~~i~~~~~~~~~~vi~~~-~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~ 249 (467)
T 2oqx_A 171 GLERGIEEVGPNNVPYIVATI-TSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQI 249 (467)
T ss_dssp HHHHHHHHHCGGGCCCEEEES-SBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHH
T ss_pred HHHHHHHhcCCCceeEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHH
Confidence 9999997532 3689999999 9988755888999999999999999999999965532 12222211 11
Q ss_pred c--cCCCCCce--eeeecccCCCccccE-EEEEcHH-HHHhhhccCCccccc----ccCCCCCCHHHHHHHH-HHHHHHh
Q psy14484 258 E--HAEIWPDF--LCLSKGITGGYLPLS-LVMTTDK-IYNSIYYKNNINIFL----HSHSYSGNPLACCAAL-ATLEIFN 326 (430)
Q Consensus 258 ~--~~~~~~d~--~~~sK~l~gG~~~ig-~~~~~~~-~~~~~~~~~~~~~~~----~~~t~~~~~~~~~aa~-~~l~~~~ 326 (430)
. .. ..+|+ .+++|+++ .|+| +++++++ +++.+.. .+... ...+++.......+++ ..++...
T Consensus 250 ~~~~~-~~~d~~~~s~sK~~g---~~~Gg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~ 322 (467)
T 2oqx_A 250 TRETY-KYADMLAMSAKKDAM---VPMGGLLCMKDDSFFDVYTE---CRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM 322 (467)
T ss_dssp HHHHG-GGCSEEEEESSSTTC---CSSCEEEEECSGGGHHHHHH---HHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTT
T ss_pred hhhhh-ccCCeEEEecccccC---CCCceEEEecChhHHHHHHH---HHHhhhccCCcccccchhhhHHHHHHHhhHhhh
Confidence 0 00 11344 46778775 3544 5566655 4333221 00010 1112232222222222 2222211
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeec--CCccchhH-HHHHHHHH-HHCCcEEeecC----
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE--DPEQIETF-SKKFFVAA-LKNELLLRPIG---- 398 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~-a~~~~~~l-~~~Gv~~~~~~---- 398 (430)
+++..++..++.+++.+.|+++ ..+.. +..+.++++.+. . .......+ +..+++.| .++||.+.+++
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~-~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~ 397 (467)
T 2oqx_A 323 NLDWLAYRIAQVQYLVDGLEEI-GVVCQ---QAGGHAAFVDAG-KLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLL 397 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCCEE---EECSSCEEEEHH-HHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHC-CCeee---cCCceEEEEech-hhcccCCcccccHHHHHHHHHHhcCceecccccccc
Confidence 1235566677888888888876 44433 334556666653 2 11112222 46678888 88899988732
Q ss_pred --------------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q psy14484 399 --------------NTVYLMPPYI-LNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 --------------~~lR~~~~~~-~t~e~i~~~~~~l~~~l~~ 427 (430)
+.+||+++.. +++++|++++++|++++.+
T Consensus 398 ~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 398 GRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp CBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 6899999998 9999999999999999875
No 148
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.93 E-value=2.2e-25 Score=215.95 Aligned_cols=341 Identities=10% Similarity=-0.002 Sum_probs=199.7
Q ss_pred EEEECCCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccc-----cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcC
Q psy14484 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM-----LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGS 101 (430)
Q Consensus 27 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~ 101 (430)
+..+.++.-|+|+.++ +..+|++++++.+++....... ......+...++++++++.++.+++++++++
T Consensus 14 ~~~~~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ 87 (400)
T 3vax_A 14 LVPRGSHMTYLDAAAT------TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTS 87 (400)
T ss_dssp --------CCCCCCCC------SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEES
T ss_pred CCcccCCcEEecCCCC------CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 3466677889998764 2468999999999887531110 0012235567899999999987778999999
Q ss_pred CchHHHHHHHHHHHHhhhhcCCCCCc-EEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCCh
Q psy14484 102 DGASAVEVALKMSFHYWYNKGFLNKK-KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA 180 (430)
Q Consensus 102 sgteA~~~al~~~~~~~~~~g~~~~~-~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
||++|++.++++++.+... +++ .|++.++.|++.......+. ....+...++.+.+...
T Consensus 88 g~t~al~~~~~~l~~~~~~----~gd~~Vl~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~~~~~~------ 147 (400)
T 3vax_A 88 GATESNNIALLGLAPYGER----TGRRHIITSAIEHKAVLEPLEHLA----------GRGFEVDFLTPGPSGRI------ 147 (400)
T ss_dssp CHHHHHHHHHHTTHHHHHH----HTCCEEEEETTSCHHHHHHHHHHH----------TTTCEEEEECCCTTCCC------
T ss_pred CHHHHHHHHHHHHHHhhcc----CCCCEEEECccccHhHHHHHHHHH----------hcCCeEEEEccCCCCCc------
Confidence 9999999999987622101 456 88888877776533222210 01123345555433322
Q ss_pred hHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC
Q psy14484 181 NEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 260 (430)
Q Consensus 181 ~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~ 260 (430)
|+++|+++++ +++++|++++ ++|++|...+ +++|.++|++||+++|+||+|+ ++... .+..
T Consensus 148 ------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~----~~~~ 208 (400)
T 3vax_A 148 ------SVEGVMERLR---PDTLLVSLMH-VNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKVP----GDLT 208 (400)
T ss_dssp ------CHHHHHTTCC---TTEEEEECCS-BCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTSG----GGGG
T ss_pred ------CHHHHHHhcC---CCceEEEEEC-CCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCCC----cChh
Confidence 7899988885 5789999999 9999998877 8999999999999999999997 43221 1222
Q ss_pred CCCCceeeee--cccCCCccccEEEE-EcHH-HH---HhhhccC-CcccccccCCCCCCHHHHHHHHHHHHHHhh--cCH
Q psy14484 261 EIWPDFLCLS--KGITGGYLPLSLVM-TTDK-IY---NSIYYKN-NINIFLHSHSYSGNPLACCAALATLEIFNK--DNI 330 (430)
Q Consensus 261 ~~~~d~~~~s--K~l~gG~~~ig~~~-~~~~-~~---~~~~~~~-~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~ 330 (430)
.. +|++++| |. .|+ .++|+++ ++++ +. ..+...- ...........+.++.++.+..++++.+.+ ++.
T Consensus 209 ~~-~d~~~~s~~K~-~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 285 (400)
T 3vax_A 209 TP-IDMISISGHKI-GAP-KGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQW 285 (400)
T ss_dssp SC-CSEEEEETGGG-TSC-SSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHH
T ss_pred hc-CcEEEEeHHHh-CCC-CceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHH
Confidence 33 7887655 84 333 4689888 8762 11 1111100 000000112334566777777777776543 456
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEee----cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQ----KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------- 397 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------- 397 (430)
.++++++.+++.+.|+ + +.+..... .+.++.+.+. .. . +..+.+.|. +||.+.++
T Consensus 286 ~~~~~~~~~~l~~~L~-~---~~~~~~~~~~~~~~~~~~~~~~-~~---~---~~~l~~~L~-~gi~v~~g~~~~~~~~~ 353 (400)
T 3vax_A 286 QVAAQDLRSRLLAGLA-S---TSFQVNGDQDHVVPHILNLSFE-DV---D---AEAFLVTLK-DLVAVATGSASTSASFT 353 (400)
T ss_dssp HHHHHHHHHHHHHHHT-T---TTCEECSCTTSBCTTEEEEECT-TC---C---HHHHHHHHH-HHHHHTTTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhC-C---CCEEEeCCcccCCCCEEEEEeC-CC---C---HHHHHHHHh-cCcEEEecccccCCCCC
Confidence 6777778888888776 3 22221111 2346666554 21 1 356788888 88866552
Q ss_pred ---------------CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 ---------------GNTVYLMP-PYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 ---------------~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+++||++ +..++++++++++++|++++++
T Consensus 354 ~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 354 PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp CHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 38999999 8899999999999999988754
No 149
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.93 E-value=4.3e-24 Score=210.62 Aligned_cols=340 Identities=14% Similarity=0.115 Sum_probs=212.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
.|+.|+||.++.+...+ .+++.+++. ... ......+...++++.+++.+ +.+++++++||++|++.++
T Consensus 40 ~~~~ylD~~~~~~~~~~---~~~~~~a~~----~~~---~~y~~~~~~~~l~~~la~~~--~~~~~~~~~~gt~a~~~al 107 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAM---SDKQWAGMM----MGD---EAYAGSENFYHLERTVQELF--GFKHIVPTHQGRGAENLLS 107 (456)
T ss_dssp GGGCSEECSCSSSCCCC---CHHHHHHHT----TCC---CCSSSCHHHHHHHHHHHHHH--CCSEEEEESSHHHHHHHHH
T ss_pred cccceeeeccccCCccC---CHHHHHHhh----cch---hhcccChhHHHHHHHHHHHh--CCCcEEEeCCcHHHHHHHH
Confidence 56779999887544322 466666654 211 11234567789999999998 4568999999999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC----------CCCCCCCCChh
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD----------SRNINKGNSAN 181 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 181 (430)
+++.. +++ ++.+++||+.+.......+.. ...++... .+.
T Consensus 108 ~~l~~--------~gd--i~~~~~~~~~~~~~~~~~G~~------------~~~v~~~~~~~~~~~~~~~~~-------- 157 (456)
T 2ez2_A 108 QLAIK--------PGQ--YVAGNMYFTTTRYHQEKNGAV------------FVDIVRDEAHDAGLNIAFKGD-------- 157 (456)
T ss_dssp HHHCC--------TTC--EEEESSCCHHHHHHHHHTTCE------------EEECBCGGGGCTTCCCSCTTC--------
T ss_pred HHhCC--------CCC--EeccccccchhHHHHHHcCCE------------EEEecccccccccccccccCC--------
Confidence 88743 334 777889987754444333311 12222211 011
Q ss_pred HHHHHHHHHHHHHHHhCC-CCeEEEEEcccccc-CCCcccCChHHHHHHHHHHHhcCCEEEEeccccC----------CC
Q psy14484 182 EIARCAIFDLEILLKKNH-NKIAAIIIEPLVQC-AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG----------CG 249 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~-~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g----------~g 249 (430)
.|+++|++++++.+ ..+++|++++ ++| ++| ..++.+++++|.++|++||+++|+||+|+. +.
T Consensus 158 ----~d~~~l~~~i~~~t~~~~~~v~l~~-p~n~ptG-~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~ 231 (456)
T 2ez2_A 158 ----IDLKKLQKLIDEKGAENIAYICLAV-TVNLAGG-QPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQG 231 (456)
T ss_dssp ----BCHHHHHHHHHHHCGGGEEEEEEES-SBTTTTS-BCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTT
T ss_pred ----CCHHHHHHHHHhccccceeEEEEec-cCCCCCC-ccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccc
Confidence 17899999997542 3468888875 554 788 677889999999999999999999999984 33
Q ss_pred Ccccccc-c-ccCCCCCceeeee-cccCCCccccEEEEE-cHHHHHhhhccCCccccccc-CCCC-CCHHHHHH-HHHHH
Q psy14484 250 RTGKFFA-C-EHAEIWPDFLCLS-KGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFLHS-HSYS-GNPLACCA-ALATL 322 (430)
Q Consensus 250 ~~g~~~~-~-~~~~~~~d~~~~s-K~l~gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~-~t~~-~~~~~~~a-a~~~l 322 (430)
+.|..+. + +..+..+|++++| |.+++.. +.|++++ ++++++.+.. .....++ .++. .+...+.+ +.+.+
T Consensus 232 ~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~a~~~~ 307 (456)
T 2ez2_A 232 FENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKE---LVVVYEGMPSYGGLAGRDMEAMAIGLR 307 (456)
T ss_dssp CTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHH---HHHHHTCCTTTTTCCHHHHHHHHHHHH
T ss_pred cCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHH---HHhhccCcccccCcchhHHHHHHHHHH
Confidence 4443211 0 0123347888775 5555431 4788888 5787766543 0000011 1222 23333333 44444
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeec--CCccchhH-HHHHHHHH-HHCCcEEeec-
Q psy14484 323 EIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE--DPEQIETF-SKKFFVAA-LKNELLLRPI- 397 (430)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~-a~~~~~~l-~~~Gv~~~~~- 397 (430)
+.++ +++.++.+++.+++.+.|+++ ..+.+. +..|.++++.+. . ......++ ...+++.| .++||.+.+.
T Consensus 308 ~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~--p~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g 382 (456)
T 2ez2_A 308 EAMQ-YEYIEHRVKQVRYLGDKLKAA-GVPIVE--PVGGHAVFLDAR-RFCEHLTQDEFPAQSLAASIYVETGVRSMERG 382 (456)
T ss_dssp HHTC-HHHHHHHHHHHHHHHHHHHHT-TCCBCS--SCCSSEEEEEHH-HHTTTSCGGGCHHHHHHHHHHHHHSEECEEES
T ss_pred HHhH-HHHHHHHHHHHHHHHHHHhcC-CCcccc--CCCceEEEEEhH-HhcCCCChhhccHHHHHHHHHHhcCeeeeccc
Confidence 4332 356677777788888888764 333221 233566666553 2 11112333 45567777 5779875431
Q ss_pred -----------------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHHHh
Q psy14484 398 -----------------GNTVYLMPPYI-LNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -----------------~~~lR~~~~~~-~t~e~i~~~~~~l~~~l~~~ 428 (430)
.+.+||+++.. ++++++++++++|++++++.
T Consensus 383 ~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 383 IISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp HHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred ccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 26899999987 89999999999999998753
No 150
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.93 E-value=1.5e-24 Score=209.71 Aligned_cols=322 Identities=12% Similarity=0.093 Sum_probs=217.6
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCC-eEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLG-HCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~v 129 (430)
-+|++.+++.+.+.. + ...+......++++.+++.++.+.+ ++++++||++|++.+++++.. ++++|
T Consensus 29 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~--------~gd~v 96 (396)
T 2ch1_A 29 CSKRVLTAMTNTVLS--N--FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLE--------EGDRV 96 (396)
T ss_dssp CCHHHHHHTTSCCCC--T--TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCC--------TTCEE
T ss_pred CCHHHHHHhcccccc--C--CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcC--------CCCeE
Confidence 467888887664321 1 1111224578899999999987777 899999999999999998753 56789
Q ss_pred EEEcCCCCCcch-hhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Q psy14484 130 ICLQNSYHGETL-GALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208 (430)
Q Consensus 130 l~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~e 208 (430)
++.+++|+++.. ...... ....+.++.+..... |+++|++++++. ++++|+++
T Consensus 97 l~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~~~~~------------d~~~l~~~l~~~--~~~~v~~~ 150 (396)
T 2ch1_A 97 LIAVNGIWAERAVEMSERY------------GADVRTIEGPPDRPF------------SLETLARAIELH--QPKCLFLT 150 (396)
T ss_dssp EEEESSHHHHHHHHHHHHT------------TCEEEEEECCTTSCC------------CHHHHHHHHHHH--CCSEEEEE
T ss_pred EEEcCCcccHHHHHHHHHc------------CCceEEecCCCCCCC------------CHHHHHHHHHhC--CCCEEEEE
Confidence 999999998631 111111 122344544432222 889999999742 56778888
Q ss_pred cccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 209 p~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
+ ++|++|.+.+ +++|.++|+++|+++|+||+|+ ++.. ..... ...+|++++| |.++++ .++|+++++
T Consensus 151 ~-~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~~~~s~~K~~~~~-~g~g~~~~~ 219 (396)
T 2ch1_A 151 H-GDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDAVYTGAQKVLGAP-PGITPISIS 219 (396)
T ss_dssp S-EETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCEEECCCC-CCCCC-SSCEEEEEC
T ss_pred C-CCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCEEEEcCCccccCC-CCeEEEEEC
Confidence 8 8899998777 8899999999999999999997 5432 12222 2346877655 988876 578999999
Q ss_pred HHHHHhhhccC-Cccccc----------------ccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHH
Q psy14484 287 DKIYNSIYYKN-NINIFL----------------HSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALT 346 (430)
Q Consensus 287 ~~~~~~~~~~~-~~~~~~----------------~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~ 346 (430)
+++++.+.... +.+.+. ....++.+..++.++.++|+.+.+ ++..++++++.+++.+.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 299 (396)
T 2ch1_A 220 PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLG 299 (396)
T ss_dssp HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 98877664310 000000 112234566777777788876533 3456777888888888888
Q ss_pred chhcCCCeeeE--eecceEEEEEEeecCCccchhHHHHHHHHHHHC-CcEEeec-----CCEEEEeC-CCCCCHHHHHHH
Q psy14484 347 SLITHPKIINF--RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN-ELLLRPI-----GNTVYLMP-PYILNKNEIQHM 417 (430)
Q Consensus 347 ~l~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~-Gv~~~~~-----~~~lR~~~-~~~~t~e~i~~~ 417 (430)
++ ........ ...+.++.+.+. .+.. +.++.+.|.++ ||.+.++ ++++|+++ ++.+++++++++
T Consensus 300 ~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~ 372 (396)
T 2ch1_A 300 KM-GLDIFVKDPRHRLPTVTGIMIP-KGVD-----WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFY 372 (396)
T ss_dssp HH-TCCBSSCSGGGBCTTEEEEECC-TTCC-----HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHH
T ss_pred HC-CCeeccCCccccCCceEEEEcC-CCCC-----HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHH
Confidence 76 33322111 012346666654 3211 36788888876 9999874 47899998 567799999999
Q ss_pred HHHHHHHHHHh
Q psy14484 418 TSAIFQTFNEV 428 (430)
Q Consensus 418 ~~~l~~~l~~~ 428 (430)
+++|+++++++
T Consensus 373 ~~~l~~~l~~~ 383 (396)
T 2ch1_A 373 LYGFKESLKAT 383 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 151
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.93 E-value=7.2e-25 Score=212.84 Aligned_cols=331 Identities=11% Similarity=0.083 Sum_probs=213.0
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhh-ccc-cccCCC--CCH---HHHH-HHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEH-VMLSNL--THK---PVIK-LSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~-~~~~~~--~~~---~~~~-l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
++++|+.++. +++ +|+|.+++.+++.+ ... +....+ ..+ ..++ .++++++.++.+. ..+++++|++
T Consensus 23 ~~~i~~~~~~--~~~---~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~-~~i~~~sGt~ 96 (407)
T 2dkj_A 23 REGLELIASE--NFV---SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW-ANVQPHSGSQ 96 (407)
T ss_dssp HTSEECCTTC--CCC---CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHH
T ss_pred hcceeeccCC--CCC---CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc-ceEEecchHH
Confidence 4688988874 344 89999999998864 211 111111 222 2333 2358888886543 3355667889
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcch--hhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETL--GALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANE 182 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 182 (430)
|++.+++++.. +++.|++.+++|+++.. ......+. .. .....+.+ +.+..
T Consensus 97 a~~~~~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~~~~g~-----~~-----~~~~~~~~~~~~~~-------- 150 (407)
T 2dkj_A 97 ANMAVYMALME--------PGDTLMGMDLAAGGHLTHGSRVNFSGK-----LY-----KVVSYGVRPDTELI-------- 150 (407)
T ss_dssp HHHHHHHHHCC--------TTCEEEEECGGGTCCGGGTCTTSHHHH-----HS-----EEEEECCCTTTSSC--------
T ss_pred HHHHHHHHhcC--------CCCEEEEecccccCccchHHHHHhcCc-----eE-----EEEecCCCcccCcc--------
Confidence 99999998843 56789999999987731 11111110 00 01122211 12222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC-CCCcccccccccC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG-CGRTGKFFACEHA 260 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g-~g~~g~~~~~~~~ 260 (430)
|+++|++++++. ++++|++ +| .++ ...+ +++|.++|++||+++|+||+|++ +...|.... ..
T Consensus 151 ----d~~~l~~~l~~~--~~~~v~~~~p-~~~---~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~ 214 (407)
T 2dkj_A 151 ----DLEEVRRLALEH--RPKVIVAGAS-AYP---RFWD----FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--PL 214 (407)
T ss_dssp ----CHHHHHHHHHHH--CCSEEEECCS-SCC---SCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--CT
T ss_pred ----CHHHHHHHHhhc--CCeEEEEecc-ccC---CCCC----HHHHHHHHHHcCCEEEEEccccccccccCccCC--cc
Confidence 889999999742 4566666 66 442 3444 89999999999999999999984 432332111 11
Q ss_pred CCCCcee--eeecccCCCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHH
Q psy14484 261 EIWPDFL--CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRI 334 (430)
Q Consensus 261 ~~~~d~~--~~sK~l~gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~ 334 (430)
. .+|++ +++|+++| .++|+++++ +++++.+... .....+.+.++..++++.++++.+.. ++..+++
T Consensus 215 ~-~~di~~~s~sK~l~g--~~~G~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 286 (407)
T 2dkj_A 215 P-YAHVVTSTTHKTLRG--PRGGLILSNDPELGKRIDKL-----IFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLV 286 (407)
T ss_dssp T-TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHHH-----HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred c-cccEEEEeccccCCC--CCceEEEECCHHHHHHHHhh-----hcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 2 26777 78899986 478999999 7888776540 11223344566666666677776432 4567778
Q ss_pred HHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEE
Q psy14484 335 SQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYL 403 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~ 403 (430)
+++.+++.+.|+++ ..+.... +..|.++++.+. .... . ...+.+.|.++||.+.++ ++++|+
T Consensus 287 ~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~-~~~~--~--~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi 359 (407)
T 2dkj_A 287 VENAKRLAEELARR-GYRIVTG-GTDNHLFLVDLR-PKGL--T--GKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRI 359 (407)
T ss_dssp HHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECG-GGTC--C--HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEE
T ss_pred HHHHHHHHHHHHhC-CceeecC-CCCceEEEEECc-ccCC--C--HHHHHHHHHHcCceecCCcCccccccccCCCceee
Confidence 88888888888765 3222111 346788887776 3111 1 357888899999998873 357999
Q ss_pred eCCCC----CCHHHHHHHHHHHHHHHHH
Q psy14484 404 MPPYI----LNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 404 ~~~~~----~t~e~i~~~~~~l~~~l~~ 427 (430)
+++.. ++++++++++++|++++.+
T Consensus 360 s~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 360 GTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp ECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 88753 7999999999999998875
No 152
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.93 E-value=1.7e-24 Score=209.68 Aligned_cols=291 Identities=12% Similarity=0.093 Sum_probs=196.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++++++.++. +++++++||++|+..+++.+.. +++.|++.++.||+........
T Consensus 60 ~~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~l~~~~~--------~gd~vi~~~~~~~~~~~~~~~~------ 123 (398)
T 2rfv_A 60 RLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLCQ--------QGDHIVSASAIYGCTHAFLSHS------ 123 (398)
T ss_dssp TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC--------TTCEEEEESSSCHHHHHHHHTH------
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhC--------CCCEEEEcCCCcccHHHHHHHH------
Confidence 45678889999999999953 4778888899999999998753 5688999999998764332110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
..........++.+ |++++++.++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 124 ---~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~ 175 (398)
T 2rfv_A 124 ---MPKFGINVRFVDAA-----------------KPEEIRAAMR---PETKVVYIET-PANPTLSLVD----IETVAGIA 175 (398)
T ss_dssp ---HHHTTCEEEEECTT-----------------SHHHHHHHCC---TTEEEEEEES-SBTTTTBCCC----HHHHHHHH
T ss_pred ---HHHcCCEEEEeCCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCcccC----HHHHHHHH
Confidence 01111233444433 7889988885 4789999999 9999998876 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCcccc-EEEEEcHHHHH-hhhccCCcccccccC-CCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPL-SLVMTTDKIYN-SIYYKNNINIFLHSH-SYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~i-g~~~~~~~~~~-~~~~~~~~~~~~~~~-t~~ 309 (430)
++||+++|+||+|+.+ ..+... .++....+.+++|.+++++.|+ |++++++++++ .+.. ..... +.+
T Consensus 176 ~~~~~~li~De~~~~~-~~~~~~---~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~------~~~~~~~~~ 245 (398)
T 2rfv_A 176 HQQGALLVVDNTFMSP-YCQQPL---QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV------GLKDITGGC 245 (398)
T ss_dssp HHTTCEEEEECTTTCT-TTCCGG---GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT------HHHHTTCCC
T ss_pred HHcCCEEEEECCCccc-ccCCch---hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH------HHHhCCCCC
Confidence 9999999999999833 222221 1233233357889997733688 99999998876 4443 22333 456
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-----------hcCCCeee----EeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-----------ITHPKIIN----FRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-----------~~~~~~~~----~~~~g~~~~~~~~~~~~~ 374 (430)
.+++++.++.++|+.+ +...++..++.+.+.+.|++. ...|.+.. .++.|.++.+++. +.
T Consensus 246 ~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~-~~-- 320 (398)
T 2rfv_A 246 MSPFNAWLTLRGVKTL--GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIA-GG-- 320 (398)
T ss_dssp CCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET-TH--
T ss_pred CCHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEc-CC--
Confidence 6888888888877643 223445556666666666542 11222111 1246888888776 31
Q ss_pred cchhHHHHHHHHHHHCCcEEeec----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLRPI----------------------------GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~~----------------------------~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
...+..+.+.+...|+.+.++ .+.+|++++..+++++++.++++|+++
T Consensus 321 --~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 321 --LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp --HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 111344555554445543322 378999999999999999998888754
No 153
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.93 E-value=6.5e-24 Score=209.98 Aligned_cols=353 Identities=14% Similarity=0.100 Sum_probs=209.5
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
.|+.||||.++++. |.|.+++.+++..... .+...+...++++++++.++ .++++||+||++|++.|+
T Consensus 41 ~g~~ylD~~~~~~~-------~~v~~a~~~~~~~~~~---~y~~~~~~~~l~~~la~~~~--~~~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 41 SSAVYIDLLTDSGT-------NAMSDHQWAAMITGDE---AYAGSRNYYDLKDKAKELFN--YDYIIPAHQGRGAENILF 108 (467)
T ss_dssp GGGCSEECSCSSSC-------CCEEHHHHHHHHTCCC---CSSSCHHHHHHHHHHHHHHC--CCEEEEESSHHHHHHHHH
T ss_pred CCceeeecccCcCC-------HHHHHHHHHHHhhccc---ccccCccHHHHHHHHHHHcC--CCcEEEcCCcHHHHHHHH
Confidence 46789999887543 7788888777654321 12345677899999999994 479999999999999999
Q ss_pred HHHHHhhhhcCCCCCc--EEEEEcCCCC-CcchhhhccCCCccchhhhhc-cCCCeeEeCCCCCCCCCCCCChhHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKK--KFICLQNSYH-GETLGALAVTNIQSFKEIYTS-LLNKTYIITTPDSRNINKGNSANEIARCA 187 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~--~vl~~~~~yh-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (430)
++++.+.... ++. .||+. .+| +.+.......+.......... .... ...+.... .|
T Consensus 109 ~~~~~~~~~~---Gd~~~~viv~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~------------~d 168 (467)
T 1ax4_A 109 PVLLKYKQKE---GKAKNPVFIS--NFHFDTTAAHVELNGCKAINIVTEKAFDSE---TYDDWKGD------------FD 168 (467)
T ss_dssp HHHHHHHHHT---TCCSSCEEEE--SSCCHHHHHHHHHTTCEEEECBCGGGGCTT---SCCTTTTC------------BC
T ss_pred HHHHHhhccC---CCccceEEEe--ccccchhhHHHhccCCceeccccccccccc---ccCCcccc------------cC
Confidence 9987632111 333 15554 444 333333332321111000000 0000 00000111 27
Q ss_pred HHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccC--C--------CCcccccc
Q psy14484 188 IFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVG--C--------GRTGKFFA 256 (430)
Q Consensus 188 ~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g--~--------g~~g~~~~ 256 (430)
+++|++++++.. +++++|++++ ++|++|..+++.+++++|.++|++||++||+||++.. . +..+..
T Consensus 169 ~~~le~~i~~~~~~~~~~vi~~~-~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~-- 245 (467)
T 1ax4_A 169 IKKLKENIAQHGADNIVAIVSTV-TCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNAT-- 245 (467)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEES-SBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCC--
T ss_pred HHHHHHHHHhcCCCCeeEEEEec-cccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCc--
Confidence 899999997542 3799999999 9999856888999999999999999999999998652 0 122211
Q ss_pred cccCC----CCCceee--eecccCCCccccEE-EEEc-H-HHHHhhhccCCcccccccCCCCCCHHHHHH-HHHHHHHHh
Q psy14484 257 CEHAE----IWPDFLC--LSKGITGGYLPLSL-VMTT-D-KIYNSIYYKNNINIFLHSHSYSGNPLACCA-ALATLEIFN 326 (430)
Q Consensus 257 ~~~~~----~~~d~~~--~sK~l~gG~~~ig~-~~~~-~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a-a~~~l~~~~ 326 (430)
..... ..+|+++ ++|.+ | .|+|+ ++.+ + ++++.+... ........++++.+....+ ...+++.+.
T Consensus 246 ~~~~~~~~~~~~d~~~~s~sK~~--g-~~~Gg~~~~~d~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 320 (467)
T 1ax4_A 246 IKEVIFDMYKYADALTMSAKKDP--L-LNIGGLVAIRDNEEIFTLARQR--CVPMEGFVTYGGLAGRDMAAMVQGLEEGT 320 (467)
T ss_dssp HHHHHHHHGGGCSEEEEETTSTT--C-CSSCEEEEESSCHHHHHHHHHH--HHHHTCSTTTTTCCHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhccccceEEEeccccC--C-CCcceEEEeCCHHHHHHHHHhh--ccccccccccCCccchHHHHHHHHHHHhh
Confidence 00000 1256664 45655 3 46655 4556 5 777665430 0000112244444433332 223455432
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeec---CCccchhHHHHHHHHH-HHCCcEEeec-----
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE---DPEQIETFSKKFFVAA-LKNELLLRPI----- 397 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~a~~~~~~l-~~~Gv~~~~~----- 397 (430)
+++..++..++.+++.+.|++. ..+... +..|.++++... . ......-....+++.| .++||.+.+.
T Consensus 321 ~~~~~~~~~~~~~~l~~~L~~~-~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~ 396 (467)
T 1ax4_A 321 EEEYLHYRIGQVKYLGDRLREA-GIPIQY--PTGGHAVFVDCK-KLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLL 396 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCCBCS--SCCSSEEEEEST-TTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhC-CCCccc--CCCceEEEEehh-hhccccccCCCCHHHHHHHHHHhcCceeeecCcccc
Confidence 2234555556778888888763 333221 233555555511 0 0000000136788888 8889998772
Q ss_pred ------C-------CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 398 ------G-------NTVYLMPP-YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 ------~-------~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+ +.+||+++ ..+|++++++++++|+++++++
T Consensus 397 ~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 397 GRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp CBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 2 68999999 4589999999999999888753
No 154
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=9e-24 Score=204.68 Aligned_cols=323 Identities=12% Similarity=0.077 Sum_probs=216.1
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
+.|+||.++... ++ |++++++.+++.... ....+...++++.++++++ .+++++++||++|++.+++.
T Consensus 30 ~~~id~~~~~~~--~~---~~v~~a~~~~~~~~~-----y~~~~~~~~l~~~la~~~~--~~~~v~~~~Gt~a~~~~l~~ 97 (399)
T 2oga_A 30 VPFLDLKAAYEE--LR---AETDAAIARVLDSGR-----YLLGPELEGFEAEFAAYCE--TDHAVGVNSGMDALQLALRG 97 (399)
T ss_dssp BCSCCHHHHHHH--TH---HHHHHHHHHHHHHTC-----CSSSHHHHHHHHHHHHHTT--SSEEEEESCHHHHHHHHHHH
T ss_pred CcccccCcCCCC--CC---HHHHHHHHHHHhcCC-----CCCchhHHHHHHHHHHHHC--CCeEEEecCHHHHHHHHHHH
Confidence 579999887543 33 899999999886532 2234677899999999995 34788999999999999988
Q ss_pred H-HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHH
Q psy14484 114 S-FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 114 ~-~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~l 191 (430)
+ .. +++.|++.+++|++....... .+ .....++.+. .+.. |+++|
T Consensus 98 ~~~~--------~gd~vl~~~~~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~~------------d~~~l 144 (399)
T 2oga_A 98 LGIG--------PGDEVIVPSHTYIASWLAVSA-TG------------ATPVPVEPHEDHPTL------------DPLLV 144 (399)
T ss_dssp TTCC--------TTCEEEEESSSCTHHHHHHHH-TT------------CEEEEECBCSSSSSB------------CHHHH
T ss_pred hCCC--------CcCEEEECCCccHHHHHHHHH-CC------------CEEEEEecCCCCCCc------------CHHHH
Confidence 7 32 567899999999885433222 11 1223444332 1222 78999
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee-
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS- 270 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s- 270 (430)
+++++ +++++|+++ +++|...+ +++|.++|+++|+++|+||+|+ ++.... ....+..+|++++|
T Consensus 145 ~~~i~---~~~~~v~~~----n~tG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~---~~~~~~~~di~~~S~ 209 (399)
T 2oga_A 145 EKAIT---PRTRALLPV----HLYGHPAD----MDALRELADRHGLHIVEDAAQA-HGARYR---GRRIGAGSSVAAFSF 209 (399)
T ss_dssp HHHCC---TTEEEECCB----CGGGCCCC----HHHHHHHHHHHTCEECEECTTC-TTCEET---TEETTCTTCEEEEEC
T ss_pred HHhcC---CCCeEEEEe----CCcCCccC----HHHHHHHHHHcCCEEEEECccc-ccCccC---CeecccccCEEEEeC
Confidence 98885 467777643 35676666 9999999999999999999997 322111 11123336888775
Q ss_pred ---cccCC-CccccEEEEEc-HHHHHhhhc---cCCccccc---ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q psy14484 271 ---KGITG-GYLPLSLVMTT-DKIYNSIYY---KNNINIFL---HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMK 339 (430)
Q Consensus 271 ---K~l~g-G~~~ig~~~~~-~~~~~~~~~---~~~~~~~~---~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~ 339 (430)
|.+++ | ++|+++.+ +++.+.+.. .+....+. .+.++..+++.++++.++++.++ .+.++.+++.+
T Consensus 210 ~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~ 285 (399)
T 2oga_A 210 YPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALAA 285 (399)
T ss_dssp CTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHH
T ss_pred CCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 99987 4 78998886 787665543 01000000 12234567888888777777553 35666777777
Q ss_pred HHHHHHHchhcCCCeeeEeecce--EEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-------------------
Q psy14484 340 KITKALTSLITHPKIINFRQKGM--IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------------------- 398 (430)
Q Consensus 340 ~l~~~l~~l~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~------------------- 398 (430)
++.+.|+++...... ..+..+. ++.+.+. .. . ..++.+.|.++||.+.+..
T Consensus 286 ~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~-~~---~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 357 (399)
T 2oga_A 286 EYLSGLAGLPGIGLP-VTAPDTDPVWHLFTVR-TE---R---RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGS 357 (399)
T ss_dssp HHHHHTTTCTTCBCC-CCCTTEECCCSSEEEE-CS---S---HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTS
T ss_pred HHHHHhccCCCcccc-CCCCCCcceeEEEEEE-CC---C---HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCC
Confidence 888877765222111 1111122 2223333 21 1 3678999999999887532
Q ss_pred ---------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 399 ---------NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 399 ---------~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+|++++..+|++|+++++++|+++++++
T Consensus 358 ~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 358 LPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp CHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred ChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999998765
No 155
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=1.4e-23 Score=199.34 Aligned_cols=332 Identities=12% Similarity=0.095 Sum_probs=211.2
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKM 113 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~ 113 (430)
.+++||.++. +.+ .+|++++++.+.... ...++..+...++++.+++.++ .+++++++||++|+..++++
T Consensus 3 ~~~i~~~~~~--~~~--p~~~~~~a~~~~~~~----~~~y~~~~~~~~l~~~la~~~g--~~~~~~~~~gt~a~~~~~~~ 72 (347)
T 1jg8_A 3 HMMIDLRSDT--VTK--PTEEMRKAMAQAEVG----DDVYGEDPTINELERLAAETFG--KEAALFVPSGTMGNQVSIMA 72 (347)
T ss_dssp --CEECSCGG--GCC--CCHHHHHHHHTCCCC----CGGGTCCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHH
T ss_pred ceEEEecccc--CCC--CCHHHHHHHhcCCCC----CcccCCChHHHHHHHHHHHHhC--CceEEEecCcHHHHHHHHHH
Confidence 4678998873 333 678888888654211 1123456677899999999984 46889999999999999887
Q ss_pred HHHhhhhcCCCCCcEEEEEcCCCCCcch-h-hhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 114 SFHYWYNKGFLNKKKFICLQNSYHGETL-G-ALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 114 ~~~~~~~~g~~~~~~vl~~~~~yhg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
+.. +++.|++.+++|..... . .....+ .....+ .+.+... |+++|
T Consensus 73 ~~~--------~gd~Vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v-~~~~~~~------------d~~~l 119 (347)
T 1jg8_A 73 HTQ--------RGDEVILEADSHIFWYEVGAMAVLSG------------VMPHPV-PGKNGAM------------DPDDV 119 (347)
T ss_dssp HCC--------TTCEEEEETTCHHHHSSTTHHHHHTC------------CEEEEE-CEETTEE------------CHHHH
T ss_pred hcC--------CCCEEEEcCcchhhhccccchhhccC------------eEEEEe-cCCCCcc------------CHHHH
Confidence 643 56788888887643211 0 111111 112223 2111111 78999
Q ss_pred HHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC---CcccccccccCCCCCc
Q psy14484 192 EILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG---RTGKFFACEHAEIWPD 265 (430)
Q Consensus 192 e~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g---~~g~~~~~~~~~~~~d 265 (430)
++++++. ..++++|++++ ++|++|....+.+.+++|.++|++||+++|+||+|. ++ ..+. .........|
T Consensus 120 ~~~i~~~~~~~~~~~~v~~~~-~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~-~~~~~~~~~--~~~~~~~~~d 195 (347)
T 1jg8_A 120 RKAIRPRNIHFPRTSLIAIEN-THNRSGGRVVPLENIKEICTIAKEHGINVHIDGARI-FNASIASGV--PVKEYAGYAD 195 (347)
T ss_dssp HHHSCCSCTTSCCEEEEEEES-SBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTH-HHHHHHHCC--CHHHHHHTCS
T ss_pred HHHhccccccccCceEEEEec-cccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhh-hcchhhcCC--ChHHhccccc
Confidence 9988631 12689999998 999883366777889999999999999999999874 21 1111 1111111223
Q ss_pred --eeeeecccCCCccccE-EEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy14484 266 --FLCLSKGITGGYLPLS-LVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKIT 342 (430)
Q Consensus 266 --~~~~sK~l~gG~~~ig-~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~ 342 (430)
++++||++++ ++| +++.++++++.+.. .+. ..+++...+.+.++++..+|+.. .+..++..++.+++.
T Consensus 196 ~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~ 266 (347)
T 1jg8_A 196 SVMFCLSKGLCA---PVGSVVVGDRDFIERARK---ARK-MLGGGMRQAGVLAAAGIIALTKM--VDRLKEDHENARFLA 266 (347)
T ss_dssp EEEEESSSTTCC---SSCEEEEECHHHHHHHHH---HHH-HHTCCCSSTHHHHHHHHHHHHHS--STTHHHHHHHHHHHH
T ss_pred EEEEecccccCC---CceEEEEcCHHHHHHHHH---HHH-HcCCchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 3468999874 467 45678877765532 000 12333333455555555666532 222344445677888
Q ss_pred HHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 343 KALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+.|+++ ..... ..+..+.++++.+. .... . +.++++.|.++||.+.+.+ +.+|++++..++++++++++++|
T Consensus 267 ~~L~~~-~~~~~-~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l 339 (347)
T 1jg8_A 267 LKLKEI-GYSVN-PEDVKTNMVILRTD-NLKV-N---AHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIF 339 (347)
T ss_dssp HHHHHH-TCBCC-GGGCCSSEEEEECT-TSSS-C---HHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHhc-Cceec-cCCCcceEEEEEcc-cccC-C---HHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 888766 32211 12345667766664 3111 1 3678999999999998864 78999998899999999999999
Q ss_pred HHHHHHh
Q psy14484 422 FQTFNEV 428 (430)
Q Consensus 422 ~~~l~~~ 428 (430)
++++.++
T Consensus 340 ~~~l~~~ 346 (347)
T 1jg8_A 340 EKLFRKF 346 (347)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988753
No 156
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=4.1e-23 Score=199.17 Aligned_cols=287 Identities=11% Similarity=0.091 Sum_probs=196.1
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..++++...++++.++++++.. +.+++++|++|++.+++.+.. +++.|++.++.||+........
T Consensus 47 ~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~~~~~~~~--------~g~~vl~~~~~~~~~~~~~~~~----- 111 (386)
T 1cs1_A 47 SRRGNPTRDVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFLK--------PGDLLVAPHDCYGGSYRLFDSL----- 111 (386)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCC--------TTCEEEEETTCCHHHHHHHHHH-----
T ss_pred eCCCCccHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhC--------CCCEEEEecCCcHhHHHHHHHH-----
Confidence 3566788899999999999644 444557779999999998743 5678999999998743211000
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
......+...++.+ |+++++++++ +++++|++++ ++|++|.+.+ +++|.++
T Consensus 112 ----~~~~g~~~~~~~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l 162 (386)
T 1cs1_A 112 ----AKRGCYRVLFVDQG-----------------DEQALRAALA---EKPKLVLVES-PSNPLLRVVD----IAKICHL 162 (386)
T ss_dssp ----HTTTSCEEEEECTT-----------------CHHHHHHHHH---TCCSEEEEEC-SCTTTCCCCC----HHHHHHH
T ss_pred ----HHhcCCEEEEeCCC-----------------CHHHHHHhhc---cCCcEEEEeC-CCCCCCcccC----HHHHHHH
Confidence 01111223344432 7899999997 4678899999 9999998876 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcH-HHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTD-KIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~-~~~~~~~~~~~~~~~~~~~t 307 (430)
|+++|+++|+||+|+++... .. . .+ .+|++ +++|.++++..++ |++++++ ++++.+.. ..+..+
T Consensus 163 ~~~~~~~li~De~~~~~~~~-~~--~-~~--~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~------~~~~~~ 230 (386)
T 1cs1_A 163 AREVGAVSVVDNTFLSPALQ-NP--L-AL--GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW------WANNIG 230 (386)
T ss_dssp HHHTTCEEEEECTTTCTTTC-CG--G-GG--TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH------HHHHHT
T ss_pred HHHcCCEEEEECCCcccccC-Cc--c-cc--CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH------HHHhcC
Confidence 99999999999999866432 11 1 12 35555 7889998754566 8999986 78777654 223334
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~ 372 (430)
...+++++.++.++++.+ +...++..++.+.+.+.|+++.. .+.+. ..++.|.++.+.+. +.
T Consensus 231 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 307 (386)
T 1cs1_A 231 VTGGAFDSYLLLRGLRTL--VPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD-GD 307 (386)
T ss_dssp CBCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES-SC
T ss_pred CCCCHHHHHHHHhcccHH--HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC-CC
Confidence 556888777766666533 22345566666677676655311 11111 12345888888876 42
Q ss_pred CccchhHHHHHHHHHHHCCcEEee---c----------------------------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAALKNELLLRP---I----------------------------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~Gv~~~~---~----------------------------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
...+.+.|.++||.+.. + .+.+|++++...++++++.+.++|
T Consensus 308 -------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al 380 (386)
T 1cs1_A 308 -------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGF 380 (386)
T ss_dssp -------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHH
Confidence 24577788888998863 1 378999999988888888777777
Q ss_pred HHH
Q psy14484 422 FQT 424 (430)
Q Consensus 422 ~~~ 424 (430)
+++
T Consensus 381 ~~~ 383 (386)
T 1cs1_A 381 RAA 383 (386)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 157
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.92 E-value=9.5e-25 Score=218.77 Aligned_cols=346 Identities=12% Similarity=0.013 Sum_probs=208.2
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcC----CC-CCeEEEcCCchHHHHHHHHHHHHh
Q psy14484 43 WWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ----YK-LGHCFYGSDGASAVEVALKMSFHY 117 (430)
Q Consensus 43 ~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~-~~~v~~~~sgteA~~~al~~~~~~ 117 (430)
.+....++.+|++++++.+++....+.....+..+.++.+++.+.+..+ .. +++|++|+||++|+..+++.+...
T Consensus 108 l~~g~~~~~~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 108 YCHTELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCcCCcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhh
Confidence 3344556678889888888776533332334455677788888865522 12 368999999999999999874221
Q ss_pred hhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC----CCCCCCCCChhHHHHHHHHHHHH
Q psy14484 118 WYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD----SRNINKGNSANEIARCAIFDLEI 193 (430)
Q Consensus 118 ~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~le~ 193 (430)
... .+++.|++.+++|+++........ .....++++. .+.. |+++|++
T Consensus 188 ~l~---~~gd~Viv~~p~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~~~------------d~~~l~~ 239 (533)
T 3f6t_A 188 HLL---KKGDKIAINEPIFTPYLRIPELKD-------------YELVEVDLHSYEKNDWEI------------EPNEIEK 239 (533)
T ss_dssp TSS---CTTCEEEEESSCCHHHHTSGGGGG-------------SEEEEECCCEETTTTSEE------------CHHHHHH
T ss_pred hcc---CCcCEEEEcCCCcHHHHHHHHHcC-------------CeEEEEEecCCcccCCCC------------CHHHHHH
Confidence 000 156789999999987643322211 1223444321 1222 7889998
Q ss_pred HHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH-hcCCEEEEeccccCCCCcccccccccCCCCCceeeeecc
Q psy14484 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN-NYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKG 272 (430)
Q Consensus 194 ~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~-~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~ 272 (430)
+++ +++++|+++. ++|++| ...+.+.+++|.++|+ +||+++|+||+|.++...+........+....+.+|||.
T Consensus 240 ~l~---~~~k~v~l~~-p~NPtG-~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~ 314 (533)
T 3f6t_A 240 LKD---PSIKALIVVN-PTNPTS-KEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKL 314 (533)
T ss_dssp HSC---TTEEEEEEES-SCTTTC-BCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHH
T ss_pred HhC---CCCeEEEEeC-CCCCCc-cccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCccc
Confidence 874 5788888877 888888 4567778999999999 689999999999987653322111112233456689999
Q ss_pred cC-CCccccEEEEEcHH-----HHHhhhcc-------------C-------------CcccccccCCCCCCHHHHHHHH-
Q psy14484 273 IT-GGYLPLSLVMTTDK-----IYNSIYYK-------------N-------------NINIFLHSHSYSGNPLACCAAL- 319 (430)
Q Consensus 273 l~-gG~~~ig~~~~~~~-----~~~~~~~~-------------~-------------~~~~~~~~~t~~~~~~~~~aa~- 319 (430)
++ .| +|+|+++++++ +++.+.+. . ..+......+.+.+++++.++.
T Consensus 315 ~g~~G-~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~ 393 (533)
T 3f6t_A 315 FGCTG-WRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEAL 393 (533)
T ss_dssp HTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHH
T ss_pred CCCcc-cceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHH
Confidence 97 46 89999999876 43332100 0 0011223344555666665521
Q ss_pred HHHHHHh-------h----cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCC--ccchh--------
Q psy14484 320 ATLEIFN-------K----DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDP--EQIET-------- 378 (430)
Q Consensus 320 ~~l~~~~-------~----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~-------- 378 (430)
.++..+. . +...++++++.+.+.+.|. + +.....+..|.+.++.+. .-. ....+
T Consensus 394 ~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~---~~~~~~~~~g~~~~~~l~-~~~~~~~g~~~~~~~~~~ 468 (533)
T 3f6t_A 394 FSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A---PKDETDTNTHYYSLIDIY-RLAEKIYGKEFRDYLTNN 468 (533)
T ss_dssp HHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C---CCCCSTTBCCSEEEEEHH-HHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C---CccccCCCceEEEEEehH-hhhhhccchHHHHHhhcc
Confidence 1223221 1 2234455556666666664 2 221111233444444443 100 00000
Q ss_pred -HHHHHHHHH-HHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 379 -FSKKFFVAA-LKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 379 -~a~~~~~~l-~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
...+++..+ .++||.+.|+ .+++|++++ .++++++++++++|.+++.+.
T Consensus 469 ~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 469 FEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp CCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHHHH
Confidence 023455554 4779998874 368999874 368999999999999998764
No 158
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.92 E-value=1.4e-23 Score=209.00 Aligned_cols=331 Identities=13% Similarity=0.086 Sum_probs=215.4
Q ss_pred CCHHHHHHHHHHHhhccc-----cccCCCCCHHHHHHHHHHHhhcC--CCCCeEEEcCCchHHHHHHHHHHH-HhhhhcC
Q psy14484 51 SNSYINKALKNQLNKLEH-----VMLSNLTHKPVIKLSEKLSSLTQ--YKLGHCFYGSDGASAVEVALKMSF-HYWYNKG 122 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgteA~~~al~~~~-~~~~~~g 122 (430)
-++++++++.+.+..... +....+..++++++++.+.+..+ .++++|++|+|+++|+..++++++ .
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------ 180 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN------ 180 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCS------
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCC------
Confidence 466788777777766321 11112233566677777765543 567899999999999999999875 3
Q ss_pred CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---C
Q psy14484 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---H 199 (430)
Q Consensus 123 ~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~ 199 (430)
+++.|++.+++|+++.......+. ....++.+...... .|+++|++++++. .
T Consensus 181 --~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~----------~d~~~l~~~l~~~~~~~ 235 (500)
T 3tcm_A 181 --EKDGILVPIPQYPLYSASIALHGG-------------ALVPYYLNESTGWG----------LETSDVKKQLEDARSRG 235 (500)
T ss_dssp --TTEEEEEEESCCTHHHHHHHHTTC-------------EEEEEECBTTTTSB----------CCHHHHHHHHHHHHHTT
T ss_pred --CCCEEEEeCCCcHhHHHHHHHcCC-------------EEEEEecccccCCC----------CCHHHHHHHHHHHHhcC
Confidence 568899999999877554433222 22333333211100 1889999999753 1
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--cccc----ccCCC---CCc-ee--
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFAC----EHAEI---WPD-FL-- 267 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~~----~~~~~---~~d-~~-- 267 (430)
.++++|++.. ++|++| ...+.+.+++|.++|++||+++|+||+|.++.+.+. ...+ ..++. ..+ ++
T Consensus 236 ~~~k~ivl~~-p~NPtG-~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~ 313 (500)
T 3tcm_A 236 INVRALVVIN-PGNPTG-QVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQ 313 (500)
T ss_dssp CEEEEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEE
T ss_pred CCceEEEEEC-CCCCCc-ccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEe
Confidence 2577777777 788888 566778899999999999999999999997654321 1111 11211 122 33
Q ss_pred eeeccc-C-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH-----------HHh-hcCH
Q psy14484 268 CLSKGI-T-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE-----------IFN-KDNI 330 (430)
Q Consensus 268 ~~sK~l-~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~-----------~~~-~~~~ 330 (430)
+|||++ + .| +|+|++++ ++++++.+.. ....+++.+.+++.++..+++ ..+ .+..
T Consensus 314 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 385 (500)
T 3tcm_A 314 SVSKGYYGECG-KRGGYFEITGFSAPVREQIYK-------IASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGI 385 (500)
T ss_dssp ESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHH-------HHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHH
T ss_pred cCCccCCCCCc-cceEEEEEeCCCHHHHHHHHH-------HHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHH
Confidence 789998 4 36 79999998 8888887765 123455667777777766664 111 2345
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCcc--------chhHHHHHH-HHHHHCCcEEeec---
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQ--------IETFSKKFF-VAALKNELLLRPI--- 397 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~--------~~~~a~~~~-~~l~~~Gv~~~~~--- 397 (430)
.++++++.+++.+.|+++ +++....++|.++.+ .+. ..... ..+ ...++ +.|.+.||.+.|+
T Consensus 386 ~~~l~~~~~~l~~~L~~~---~g~~~~~~~g~~~~~~~~~-lp~~~~~~~~~~g~~~-~~~~~~~ll~~~gI~v~pg~~f 460 (500)
T 3tcm_A 386 LASLARRAKALEHAFNKL---EGITCNEAEGAMYVFPQIC-LPQKAIEAAKAANKAP-DAFYALRLLESTGIVVVPGSGF 460 (500)
T ss_dssp HHHHHHHHHHHHHHHHTS---TTEECCCCCBTTEECCEEC-CCHHHHHHHHHHTSCH-HHHHHHHHHHHHCEECEESTTT
T ss_pred HHHHHHHHHHHHHHHhcC---CCcEEecCCeEEEEeeeec-CchhhHHHHHhcCCCc-HHHHHHHHHHHCCEEEEeCccc
Confidence 566777777888887765 455545556665554 232 11000 000 12233 4556779999874
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 -----GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 -----~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
...+|++++ ++++++++++++|+++++++.
T Consensus 461 ~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 461 GQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp CCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
Confidence 146899877 899999999999999988654
No 159
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.92 E-value=6.5e-23 Score=204.25 Aligned_cols=352 Identities=10% Similarity=0.093 Sum_probs=212.9
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCC----CCHHHHHHHHHHHhhcCCCC-CeEEEcCCchHH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL----THKPVIKLSEKLSSLTQYKL-GHCFYGSDGASA 106 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~----~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgteA 106 (430)
.+..|+|+..+ +..+|.+.+++.....+.. ..... ......+++++++++++.+. +.++|++||++|
T Consensus 99 ~~~~yl~~~~~------~~~~~~v~~~~~~~~~n~~--~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a 170 (497)
T 2qma_A 99 QHPDCIAHLHT------PPLMPAVAAEAMIAALNQS--MDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQS 170 (497)
T ss_dssp TSTTBCSSSCC------CCBHHHHHHHHHHHHHCCC--TTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHH
T ss_pred CCCCeeEeCCC------CCcHHHHHHHHHHHhhccc--ccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHH
Confidence 44566665543 2346777777765443211 11111 12344566778999987544 789999999999
Q ss_pred HHHHHHHHHHhhh---------hcCCCC--Cc-EEEEEcCCCCCcchhhhccCCCccchhhhhccCC-CeeEeCCCCCCC
Q psy14484 107 VEVALKMSFHYWY---------NKGFLN--KK-KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLN-KTYIITTPDSRN 173 (430)
Q Consensus 107 ~~~al~~~~~~~~---------~~g~~~--~~-~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 173 (430)
+..++++++.+.. ..|.+. ++ .|++ +...|.+...+....+. .. .++.++.+..++
T Consensus 171 ~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~-s~~~h~s~~~~~~~~g~----------g~~~v~~v~~~~~~~ 239 (497)
T 2qma_A 171 NQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC-SKKSHFTVQKSASWMGL----------GEKAVMTVDANADGT 239 (497)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE-ETTSCTHHHHHHHHTTS----------CGGGEEEECBCTTSS
T ss_pred HHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE-CCCchHHHHHHHHHcCC----------CcccEEEEecCCCCc
Confidence 9999999865322 123221 24 4554 44455443332222211 01 234555543333
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
. |+++|++++++. ...+.+|+++. +++++|.+.| +++|.++|++||+++|+|++|+++..
T Consensus 240 ~------------d~~~L~~~i~~~~~~~~~~~~vv~~~-~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~ 302 (497)
T 2qma_A 240 M------------DITKLDEVIAQAKAEGLIPFAIVGTA-GTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALI 302 (497)
T ss_dssp B------------CGGGHHHHHHHHHHTTCEEEEEEEEB-SCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred C------------CHHHHHHHHHHHHHCCCcceEEEEcC-CCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHH
Confidence 3 778888888753 11245777777 7888898777 99999999999999999999997654
Q ss_pred cccccccccCCC-CCceeee--ecccCCCccccEEEEEcHHH-HHhhhccCCccccc-ccCCCCCCHHH----------H
Q psy14484 251 TGKFFACEHAEI-WPDFLCL--SKGITGGYLPLSLVMTTDKI-YNSIYYKNNINIFL-HSHSYSGNPLA----------C 315 (430)
Q Consensus 251 ~g~~~~~~~~~~-~~d~~~~--sK~l~gG~~~ig~~~~~~~~-~~~~~~~~~~~~~~-~~~t~~~~~~~----------~ 315 (430)
... +.....++ .+|++++ +|.++++ .++|+++++++. ++.+.. ...+. ...+..+++.. .
T Consensus 303 ~~~-~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~r~~~a 377 (497)
T 2qma_A 303 LSS-HKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLH---HADYLNREHDELPNLVDKSIATTKRFDA 377 (497)
T ss_dssp GST-TGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC-----------------------CCSCCCTH
T ss_pred hCc-chHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcC---CchhcCCccccCCCccccCCCCCCchhH
Confidence 333 22223355 6788876 7988877 589999987543 443322 00111 01110111111 1
Q ss_pred HHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeee-EeecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 316 CAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 316 ~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
.+..++++.+.. ++..++..++++++.+.|+++ +.+.- .++.+.++.|.+. +.......+..++.+.|.++|
T Consensus 378 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~-~~~~~~~~l~~~l~~~l~~~G 453 (497)
T 2qma_A 378 LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTN---DQFELLAEPSLSTVLFRAT-HETADLDELNKALRLEALTRG 453 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTC---TTEEECSCCSSSEEEEEEC-CSSSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhC---CCeEEEcCCCceEEEEEEc-CCccCHHHHHHHHHHHHHhCC
Confidence 123344554432 245566777888888888765 33221 1345667777776 422111223456788899999
Q ss_pred cEEeec----C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 392 LLLRPI----G-NTVYLMP-PYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 392 v~~~~~----~-~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+.+.+. + .++||++ +..+|++++++++++|++++.++
T Consensus 454 ~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 454 IAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp SCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 887642 2 5799997 88999999999999999998764
No 160
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-23 Score=209.49 Aligned_cols=333 Identities=10% Similarity=0.020 Sum_probs=213.5
Q ss_pred CCCHHHHHHHHHHHhhccccccCC-C----CCHHHHHHHHHHHhhcCCC--CCeEEEcCCchHHHHHHHHHHHHhhhhc-
Q psy14484 50 HSNSYINKALKNQLNKLEHVMLSN-L----THKPVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYWYNK- 121 (430)
Q Consensus 50 ~~~p~v~~a~~~~~~~~~~~~~~~-~----~~~~~~~l~~~l~~~~~~~--~~~v~~~~sgteA~~~al~~~~~~~~~~- 121 (430)
++++.+.+++.+++.......... . ......+++++++++++.+ .+.+++++||++|+..++++++.+...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 356899999999887643221111 1 1245567888899998765 6789999999999999999998754322
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
|. .++.|++..++|..+... .... ..+.+.++.+. .++. |+++|+++++ +
T Consensus 155 g~-~~~~Vi~~~~~h~~~~~~-~~~~------------G~~~~~v~~~~~~~~~------------d~~~l~~~i~---~ 205 (497)
T 3mc6_A 155 GI-TEPEIIAPVTAHAGFDKA-AYYF------------GMKLRHVELDPTTYQV------------DLGKVKKFIN---K 205 (497)
T ss_dssp CC-SSCEEEEETTSCHHHHHH-HHHS------------CCEEEEECBCTTTCSB------------CTTTTGGGCC---S
T ss_pred CC-CCceEEEeCCccHHHHHH-HHHc------------CCeEEEEecCcccCcC------------CHHHHHHHHh---h
Confidence 22 245777777666543222 2212 22334555443 2222 7788888885 4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCc-------cc--ccccccCCCCCceeeee-
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT-------GK--FFACEHAEIWPDFLCLS- 270 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~-------g~--~~~~~~~~~~~d~~~~s- 270 (430)
++++|+++. +++++|.+.+ +++|.++|++||+++|+||+|+++.+. |. .+.....+ .|+++++
T Consensus 206 ~~~~v~~~~-p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g--~d~~~~s~ 278 (497)
T 3mc6_A 206 NTVLLVGSA-PNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPG--VTSISCDT 278 (497)
T ss_dssp SEEEEEEET-TCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTT--CCEEEEET
T ss_pred CCEEEEEEC-CCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCC--CcEEEECc
Confidence 689999998 9999998877 889999999999999999999854321 11 12222333 4666555
Q ss_pred -cccCCCccccEEEEEcHHHHHhhhcc---CCcccccccCCCCC--CHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHH
Q psy14484 271 -KGITGGYLPLSLVMTTDKIYNSIYYK---NNINIFLHSHSYSG--NPLACCAALATLEIFNK---DNILQRISQDMKKI 341 (430)
Q Consensus 271 -K~l~gG~~~ig~~~~~~~~~~~~~~~---~~~~~~~~~~t~~~--~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l 341 (430)
|.+.++ .++|+++++++.+...... ..........++.+ .....++..++++.+.. .+..++..++.+++
T Consensus 279 ~K~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l 357 (497)
T 3mc6_A 279 HKYGFAP-KGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKF 357 (497)
T ss_dssp TTTTCCC-SSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCC-CCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 877666 6899999987665433210 00000000111111 12223344445554443 34556677788888
Q ss_pred HHHHHc-hhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--CEEEEeCCCCCCHHHHHHHH
Q psy14484 342 TKALTS-LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG--NTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 342 ~~~l~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~--~~lR~~~~~~~t~e~i~~~~ 418 (430)
++.|++ +.....+ ..+.+.++.+... . . . +.++.+.|.++||.+.... ..+|++++ .++++++++++
T Consensus 358 ~~~L~~~~~g~~~~--~~~~~~~v~~~~~-~-~---~--~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~ 427 (497)
T 3mc6_A 358 KKYIQENIPDLDIM--GNPRYSVISFSSK-T-L---N--IHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEIC 427 (497)
T ss_dssp HHHHHHSCTTCEEC--SCCCSSEEEEECT-T-T---T--HHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHH
T ss_pred HHHHHhcCCCEEEe--cCCCeeEEEEeCC-C-C---C--HHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCCHHHHHHHH
Confidence 888876 3332221 1345566666443 2 1 1 3679999999999887653 57899988 78999999999
Q ss_pred HHHHHHHHHhh
Q psy14484 419 SAIFQTFNEVI 429 (430)
Q Consensus 419 ~~l~~~l~~~~ 429 (430)
++|++++.++.
T Consensus 428 ~~L~~~l~~~~ 438 (497)
T 3mc6_A 428 DILRTTVQELK 438 (497)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 161
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.92 E-value=1.6e-23 Score=202.92 Aligned_cols=339 Identities=10% Similarity=0.015 Sum_probs=204.9
Q ss_pred EEEecccccccccCCCC--CHHHHHHHHHHHhh-cccccc-CCCCCHHHHHHHHHHHhhcC--CCCCeEEE--cCCchHH
Q psy14484 35 RYLDAISSWWVNLFGHS--NSYINKALKNQLNK-LEHVML-SNLTHKPVIKLSEKLSSLTQ--YKLGHCFY--GSDGASA 106 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~~--~p~v~~a~~~~~~~-~~~~~~-~~~~~~~~~~l~~~l~~~~~--~~~~~v~~--~~sgteA 106 (430)
.++||..|......++. .|.+.+++.+.... ....+. ..+..++++.+++.+.+..+ .++++|++ |+||++|
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~a 108 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGS 108 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHH
Confidence 37888877432333432 24677777776543 111111 12223455556565554332 23789977 9999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhHHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEIA 184 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 184 (430)
+..++++++... .+++.|++.+|+|+++.......+ .....++.. ..+..
T Consensus 109 l~~~~~~l~~~~-----~~gd~Vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~---------- 160 (401)
T 7aat_A 109 LRVGANFLQRFF-----KFSRDVYLPKPSWGNHTPIFRDAG-------------LQLQAYRYYDPKTCSL---------- 160 (401)
T ss_dssp HHHHHHHHHHHC-----TTCCEEEEEESCCTTHHHHHHHTT-------------CEEEEEECEETTTTEE----------
T ss_pred HHHHHHHHHHhc-----cCCCEEEEcCCCchhHHHHHHHcC-------------CeeEeeeeeccccCcc----------
Confidence 999998776321 156889999999998754433322 122333332 11222
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---cccccc-C
Q psy14484 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFACEH-A 260 (430)
Q Consensus 185 ~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~~~-~ 260 (430)
|++.+++.+++.+++++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|.+++..+. ...... .
T Consensus 161 --d~~~l~~~l~~~~~~~~~v~i~~-p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 236 (401)
T 7aat_A 161 --DFTGAMEDISKIPEKSIILLHAC-AHNPTG-VDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFI 236 (401)
T ss_dssp --CHHHHHHHHTTSCTTCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred --CHHHHHHHHHhCCCCcEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHH
Confidence 77888888876556778888888 899999 567788899999999999999999999998866442 111111 1
Q ss_pred CCCCc---eeeeecccCC-CccccEEEEE---cHHH----HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH--H--
Q psy14484 261 EIWPD---FLCLSKGITG-GYLPLSLVMT---TDKI----YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI--F-- 325 (430)
Q Consensus 261 ~~~~d---~~~~sK~l~g-G~~~ig~~~~---~~~~----~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~--~-- 325 (430)
+..++ +.+|||.++. | +|+|++++ +++. ...+.. .....+.+.+..++.++...++. +
T Consensus 237 ~~~~~~i~~~S~sK~~~~~G-~RiG~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 309 (401)
T 7aat_A 237 EQGIDVVLSQSYAKNMGLYG-ERAGAFTVICRDAEEAKRVESQLKI------LIRPMYSNPPMNGARIASLILNTPELRK 309 (401)
T ss_dssp HTTCCCEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHHCHHHHH
T ss_pred hcCCcEEEEecCCccccccc-CceEEEEEEeCCHHHHHHHHHHHHH------HHHhccCCCChHHHHHHHHHhCCHHHHH
Confidence 22233 3579999984 6 89999886 5553 233322 12223334445555555444421 0
Q ss_pred ---h-hcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEE
Q psy14484 326 ---N-KDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTV 401 (430)
Q Consensus 326 ---~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~l 401 (430)
+ .+...++++++.+++.+.|+++...+.+....+.+.++.+.-. + ...+...+.++||.+.++ +
T Consensus 310 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~ll~~~gi~v~~~---~ 377 (401)
T 7aat_A 310 EWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGL-K--------PEQVERLTKEFSIYMTKD---G 377 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCC-C--------HHHHHHHHHHHCEECCTT---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCC-C--------HHHHHHHHHhCCEeccCC---C
Confidence 1 1334566777777888888765211122223344555444211 1 133433446779998754 5
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
|++++.. ++++|++++++|++++
T Consensus 378 Ris~~~~-~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 378 RISVAGV-ASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred eEEeccC-ChhhHHHHHHHHHHHh
Confidence 8988754 4455999999998875
No 162
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.91 E-value=7.9e-24 Score=205.74 Aligned_cols=332 Identities=10% Similarity=0.061 Sum_probs=206.9
Q ss_pred CEEEecccccccccCC-CCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhc-CCC-----CCeEE--EcCCch
Q psy14484 34 KRYLDAISSWWVNLFG-HSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLT-QYK-----LGHCF--YGSDGA 104 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~-----~~~v~--~~~sgt 104 (430)
..++||..|. +++ .++|.+.+++.++....... +.......++++.+++.+ +.. .++|. .+++|+
T Consensus 41 ~~~i~l~~g~---~~d~~~~~~v~~a~~~a~~~~~~~---y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ 114 (409)
T 4eu1_A 41 KRKVNLSIGV---YRDDADQPFVLECVKQATLGTNMD---YAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGT 114 (409)
T ss_dssp SSCEECCCSS---CCCTTSCCCCCHHHHTCCCCSCCC---CCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHH
T ss_pred cCceeeeeeE---EECCCCCEeecHHHHhcCcccccc---CCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccch
Confidence 4688988763 323 35778888888772221111 112222234444444433 222 56774 499999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChhH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANE 182 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 182 (430)
+|++.+..++.... .+++.|++.+|+|+++.......+ .....++.. +.+..
T Consensus 115 ga~~~~~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~-------- 168 (409)
T 4eu1_A 115 GALRIGGDLLNRFV-----ANCNRIYGPDVGYPNHESIFAKAG-------------MELTPYSYYDPATKGL-------- 168 (409)
T ss_dssp HHHHHHHHHGGGTS-----SSCCEEEEESSCCTHHHHHHHHTT-------------CEEEEECCEETTTTEE--------
T ss_pred HHHHHHHHHHHHhc-----CCCCEEEEeCCCcHhHHHHHHHcC-------------CeEEEEEeecCcCCcC--------
Confidence 99998876554332 145899999999987744433322 122334431 11222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---cccc-c
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFAC-E 258 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~-~ 258 (430)
|+++|++.+++++++.+++++.. ++|++| ..++.+.+++|.++|++||+++|+||+|.++.+.+. .... .
T Consensus 169 ----d~~~l~~~l~~~~~~~~~i~~~~-p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 242 (409)
T 4eu1_A 169 ----NLAGMLECLDKAPEGSVILVHAC-AHNPTG-VDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRH 242 (409)
T ss_dssp ----CHHHHHHHHHHSCTTCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred ----cHHHHHHHHHhCCCCcEEEEECC-CCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHH
Confidence 88999999986545566777666 778888 566778899999999999999999999998876541 1121 1
Q ss_pred cCCCCCcee---eeecccC-CCccccEEE---EEcHH----HHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH--
Q psy14484 259 HAEIWPDFL---CLSKGIT-GGYLPLSLV---MTTDK----IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF-- 325 (430)
Q Consensus 259 ~~~~~~d~~---~~sK~l~-gG~~~ig~~---~~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~-- 325 (430)
..+..++++ +|||.++ .| +|+|++ +.+++ +.+.+.. .....+++.+++++.++.++|+..
T Consensus 243 ~~~~~~~~i~~~S~SK~~g~~G-~riG~~~~v~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~ 315 (409)
T 4eu1_A 243 LVDMVPNLIVAQSFSKNFGLYG-HRCGALHISTASAEEAKRLVSQLAL------LIRPMYNNPPLYGAWVVSSILKDPQL 315 (409)
T ss_dssp HHTTSSCCEEEEECTTTSSCGG-GCCEEEEEECSSHHHHHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHHCHHH
T ss_pred HHhhCCcEEEEecCcccccCcc-CCceEEEEEeCCHHHHHHHHHHHHH------HHhhhcCCCChHHHHHHHHHhCCHHH
Confidence 123344543 7999998 46 899996 45666 5444433 223445566778887777777621
Q ss_pred -----h-hcCHHHHHHHHHHHHHHHHHchhcCCC-eeeEeecceEEEEEEeecCCccchhHHHHHHHHHH-HCCcEEeec
Q psy14484 326 -----N-KDNILQRISQDMKKITKALTSLITHPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAAL-KNELLLRPI 397 (430)
Q Consensus 326 -----~-~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~Gv~~~~~ 397 (430)
+ .+...++++++.+++.+.|+++ ..+. +....+.|.++.+.-. . .+++..++ ++||.+.|+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------~----~~~~~~ll~~~gv~v~p~ 384 (409)
T 4eu1_A 316 TALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGL------T----REQVELLRSEYHIYMTLN 384 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCC------C----HHHHHHHHHHHCEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCC------C----HHHHHHHHHcCCEEEcCC
Confidence 1 2345567777788888888765 2121 2223344555444211 1 23455555 569999876
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 398 GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 398 ~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
+ ||+++ ..+++++++++++|++++
T Consensus 385 ~---Ri~~~-~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 385 G---RAAVS-GLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp C---EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred C---EEEEE-ecCHhhHHHHHHHHHHHh
Confidence 3 78776 456677999999998875
No 163
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.91 E-value=1e-23 Score=203.05 Aligned_cols=319 Identities=10% Similarity=0.055 Sum_probs=205.4
Q ss_pred CCHHHHHHHHHHHhhccccccCCCC--CHHHHHHHHHHHhhcCC----CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLT--HKPVIKLSEKLSSLTQY----KLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~----~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
-+|++.+++.+.... + +.+ .....++++.+++.+.. +++++++++||++|++.+++.+... . .
T Consensus 16 ~~~~v~~a~~~~~~~--~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~----~-~ 84 (385)
T 2bkw_A 16 LSGAVQKALDVPSLG--H----TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS----K-A 84 (385)
T ss_dssp CCHHHHHTTSCCCCC--T----TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT----T-C
T ss_pred chHHHHHHHhccccc--c----CCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhcc----C-C
Confidence 357777776654321 1 111 12345566667766642 3579999999999999999987510 0 0
Q ss_pred CCcEEEEE-cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 125 NKKKFICL-QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 125 ~~~~vl~~-~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
+++.|+++ .+.||.+....... .......++. +..... |+++|++++++ .++
T Consensus 85 ~gd~vlv~~~~~~~~~~~~~~~~------------~g~~~~~v~~~~~~~~~------------d~~~l~~~l~~--~~~ 138 (385)
T 2bkw_A 85 PNKNVLVVSTGTFSDRFADCLRS------------YGAQVDVVRPLKIGESV------------PLELITEKLSQ--NSY 138 (385)
T ss_dssp SCCEEEEECSSHHHHHHHHHHHH------------TTCEEEEECCSSTTSCC------------CHHHHHHHHHH--SCC
T ss_pred CCCeEEEEcCCcchHHHHHHHHH------------cCCceEEEecCCCCCCC------------CHHHHHHHHhc--CCC
Confidence 45677777 45666542111111 1123345555 332222 88999999974 357
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhc--CCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCcc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY--NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYL 278 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~--gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~ 278 (430)
++|++++ ++|++|.+.+ +++|.++|++| |+++|+||+|+ ++.. .+.+. ...+|+++ ++|.++|+ .
T Consensus 139 ~~v~~~~-~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~~~~~-~ 207 (385)
T 2bkw_A 139 GAVTVTH-VDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCE--EFEFD--EWGVDFALTASQKAIGAP-A 207 (385)
T ss_dssp SEEEEES-EETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTS--CCCTT--TTTCSEEEEESSSTTCCC-S
T ss_pred CEEEEEc-cCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCc--ccccc--ccCceEEEecCccccccC-C
Confidence 7888899 9999998877 99999999999 99999999997 4322 12222 23467765 46988765 4
Q ss_pred ccEEEEEcHHHHH-hhhc-----c---C--------Cccccccc--C-CCCCCHHHHHHHHHHHHHHhh---cCHHHHHH
Q psy14484 279 PLSLVMTTDKIYN-SIYY-----K---N--------NINIFLHS--H-SYSGNPLACCAALATLEIFNK---DNILQRIS 335 (430)
Q Consensus 279 ~ig~~~~~~~~~~-~~~~-----~---~--------~~~~~~~~--~-t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~ 335 (430)
++|++++++++++ .+.. . + ....+..+ . ..+.++.++.++.++++.+.+ +...++++
T Consensus 208 G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 287 (385)
T 2bkw_A 208 GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHR 287 (385)
T ss_dssp CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 6799999988776 4420 0 0 00001111 1 134677777777778876543 34567778
Q ss_pred HHHHHHHHHH-HchhcCCCeeeEe---ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------CCEEEEe-
Q psy14484 336 QDMKKITKAL-TSLITHPKIINFR---QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------GNTVYLM- 404 (430)
Q Consensus 336 ~~~~~l~~~l-~~l~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------~~~lR~~- 404 (430)
++.+++.+.| +++ ......... ..+.++++.+. + ..++.+.|.++||.+.++ .+++|++
T Consensus 288 ~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~ 357 (385)
T 2bkw_A 288 EMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVA-D--------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGH 357 (385)
T ss_dssp HHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECS-C--------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECC
T ss_pred HHHHHHHHHHHHhc-CceecccCcccccCCceEEEecC-C--------HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEc
Confidence 8888898888 765 222111000 24667777665 3 357889999999999874 3689998
Q ss_pred CC---CCCCHHHHHHHHHHHHHHHHH
Q psy14484 405 PP---YILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 405 ~~---~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++ +.++++++++++++|++++++
T Consensus 358 ~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 358 MGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp CGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred cccccccCCHHHHHHHHHHHHHHHHh
Confidence 54 357999999999999988754
No 164
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.91 E-value=1.3e-22 Score=197.34 Aligned_cols=307 Identities=12% Similarity=0.044 Sum_probs=200.4
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCC
Q psy14484 46 NLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLN 125 (430)
Q Consensus 46 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~ 125 (430)
..++|.+|+..+++.+ ....+. ......+...++++.+++.++ .+++++++||++|++.+++.+.. +
T Consensus 28 ~~~~~~~~~~~~~~~~--~~~~~~-y~~~~~~~~~~l~~~la~~~g--~~~~~~~~~gt~a~~~al~~l~~--------~ 94 (412)
T 2cb1_A 28 AAYGFKTLEEGQERFA--TGEGYV-YARQKDPTAKALEERLKALEG--ALEAVVLASGQAATFAALLALLR--------P 94 (412)
T ss_dssp SBCCCSSHHHHHHHHH--HCCSCS-BTTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHTTCC--------T
T ss_pred ceeecCChHHHHHHhc--cccCcC-cCCCCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------C
Confidence 3577887766655443 222221 223455788999999999995 45899999999999999997743 5
Q ss_pred CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 126 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
++.|++.++.|++.......... ....+..+++. |+++|+++++ +++++|
T Consensus 95 gd~vi~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~------------------~~~~l~~~i~---~~~~~v 144 (412)
T 2cb1_A 95 GDEVVAAKGLFGQTIGLFGQVLS---------LMGVTVRYVDP------------------EPEAVREALS---AKTRAV 144 (412)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTT---------TTTCEEEEECS------------------SHHHHHHHCC---TTEEEE
T ss_pred CCEEEEeCCCchhHHHHHHHHHH---------HcCCEEEEECC------------------CHHHHHHHhc---cCCeEE
Confidence 67899999988764322111000 01122233322 4688888885 578999
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEE
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLV 283 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~ 283 (430)
++++ ++|++|.+.+ +++|.++|++||+++|+||+|++++.... .....+|+++ ++|.++++..++|++
T Consensus 145 ~~~~-~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~-----~~~~~~di~~~S~~K~~~~~~~~~G~~ 214 (412)
T 2cb1_A 145 FVET-VANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCR-----PLAWGAHVVVESLTKWASGHGSVLGGA 214 (412)
T ss_dssp EEES-SCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCC-----GGGGTCSEEEEETTTTTTCSSCCCCEE
T ss_pred EEeC-CCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCC-----ccccCCeEEEECCcccccCCCCcEEEE
Confidence 9999 9999998877 99999999999999999999985522211 1223578775 779998743689988
Q ss_pred EEcH-H---------------------------HHHhhhccCCccccc-ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHH
Q psy14484 284 MTTD-K---------------------------IYNSIYYKNNINIFL-HSHSYSGNPLACCAALATLEIFNKDNILQRI 334 (430)
Q Consensus 284 ~~~~-~---------------------------~~~~~~~~~~~~~~~-~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~ 334 (430)
++.+ + +.+.++. .. .......++..++.+...++.+ +...++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~------~~~~~~g~~~~~~~a~~~~~~l~~l--~~~~~~~ 286 (412)
T 2cb1_A 215 VLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRT------LGLSLCGMALSPFNAYLLFQGLETV--ALRVARM 286 (412)
T ss_dssp EEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHH------HHTTTTCCCCCHHHHHHHHHHGGGH--HHHHHHH
T ss_pred EEeccccccccccccccccccccchhhccchHHHHHHHHH------HHHHhcCCCCChHHhHHHHcCCchH--HHHHHHH
Confidence 7654 2 2222222 11 1112234566665555555433 2334555
Q ss_pred HHHHHHHHHHHHchhcCCCee--e-------------EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--
Q psy14484 335 SQDMKKITKALTSLITHPKII--N-------------FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-- 397 (430)
Q Consensus 335 ~~~~~~l~~~l~~l~~~~~~~--~-------------~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-- 397 (430)
.++.+++.+.|.+......+. . .++.|.++.|.+. + ...+.+.|.+.|+.+ ..
T Consensus 287 ~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~~-~--------~~~~~~~l~~~~i~~-~~s~ 356 (412)
T 2cb1_A 287 SETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDLG-D--------LERASRFLGAIRLLK-AANL 356 (412)
T ss_dssp HHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECS-S--------HHHHHHHHHHCSSEE-CSCC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-C--------HHHHHHHHHhCCeee-eccc
Confidence 677888888887642222110 0 0245777777663 2 245666677778876 22
Q ss_pred -----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 398 -----------------------------GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 398 -----------------------------~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.+.+|++++..+++++|+.++++|++
T Consensus 357 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 357 GDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp SCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 36899999999999999999988864
No 165
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.91 E-value=6.1e-23 Score=198.13 Aligned_cols=283 Identities=13% Similarity=0.103 Sum_probs=196.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++++ .+++++++||++|++.+++.+.. ++++|++..+.|++........
T Consensus 62 r~~~~~~~~l~~~la~~~g--~~~~~~~~sGt~A~~~al~~~~~--------~gd~Vi~~~~~y~~~~~~~~~~------ 125 (392)
T 3qhx_A 62 RTGNPTRTALEAALAAVED--AAFGRAFSSGMAAADCALRAMLR--------PGDHVVIPDDAYGGTFRLIDKV------ 125 (392)
T ss_dssp TTCCHHHHHHHHHHHHHTT--CSEEEEESSHHHHHHHHHHHHCC--------TTCEEEEETTCCHHHHHHHHHT------
T ss_pred CCCChHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEeCCCcchHHHHHHHH------
Confidence 4567888999999999985 45899999999999999997743 5688999999998753322111
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
+.....++.+++.+ |+++++++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 126 ---~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la 177 (392)
T 3qhx_A 126 ---FTGWNVEYTPVALA-----------------DLDAVRAAIR---PTTRLIWVET-PTNPLLSIAD----IAGIAQLG 177 (392)
T ss_dssp ---GGGGTCEEEEECTT-----------------CHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHH
T ss_pred ---HHhcCcEEEEeCCC-----------------CHHHHHHhhC---CCCeEEEEEC-CCCCCcEEec----HHHHHHHH
Confidence 11122334455443 7899999885 5799999999 9999998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCc-cccEEEEEc-HHHHHhhhccCCcccccccCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGY-LPLSLVMTT-DKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~-~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
++||+++|+||+|+.. .. ....+..+|+++ ++|.+++++ .++|+++.+ +++.+.+.. ..+..+.
T Consensus 178 ~~~g~~li~D~~~~~~-~~-----~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~------~~~~~g~ 245 (392)
T 3qhx_A 178 ADSSAKVLVDNTFASP-AL-----QQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF------LQNGAGA 245 (392)
T ss_dssp HHHTCEEEEECTTTCT-TT-----CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH------HHHHHCC
T ss_pred HHcCCEEEEECCCccc-cc-----CChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH------HHHhcCC
Confidence 9999999999999732 21 122244578776 889998743 578999997 577776654 2333456
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeE------------------eecceEEEEEEee
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF------------------RQKGMIWAFDVII 370 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~------------------~~~g~~~~~~~~~ 370 (430)
..+++.+.++...++.+. ...++..++.+++.+.|++. +.+..+ ++.|.++++++.
T Consensus 246 ~~~~~~~~~~~~~l~~l~--~~~~~~~~~~~~l~~~L~~~---~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~- 319 (392)
T 3qhx_A 246 VPGPFDAYLTMRGLKTLV--LRMQRHSENAAAVAEFLAEH---PAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR- 319 (392)
T ss_dssp CCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET-
T ss_pred CCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHhcC---CCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC-
Confidence 677887777766665432 23455566666777777643 222211 556889999997
Q ss_pred cCCccchhHHHHHHHHHHHCCcEEe----------e---------------cCCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 371 EDPEQIETFSKKFFVAALKNELLLR----------P---------------IGNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 371 ~~~~~~~~~a~~~~~~l~~~Gv~~~----------~---------------~~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+. ..+..+.+.|...|+.+. | ..+.+||+++...+++.++.+.++|
T Consensus 320 ~~~----~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 320 AGR----TAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp TCH----HHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CcH----HHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 421 124567777665554332 2 1357999988877777776666554
No 166
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=7.2e-23 Score=202.60 Aligned_cols=331 Identities=13% Similarity=0.095 Sum_probs=211.5
Q ss_pred CCCCCHHHHHHHHHHHhhccccc---cCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC-
Q psy14484 48 FGHSNSYINKALKNQLNKLEHVM---LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF- 123 (430)
Q Consensus 48 lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~- 123 (430)
.+|.+|++.+++.+....++.+. ...+..+...++++++++.++.+. .+++++||++|+..|+++++.+...+|.
T Consensus 75 ~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~ 153 (474)
T 1wyu_B 75 TMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILIIRAYHEDRGEG 153 (474)
T ss_dssp CCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHHHHHHHhcCCc
Confidence 34677999888876522111000 001112567889999999986442 4668899999999999888765444554
Q ss_pred CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 124 ~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++++|++.+ .+|+....+....+ .+++.++.+.++.. |+++|+++++ ++++
T Consensus 154 ~~r~~Vlv~~-~~h~~~~~~~~~~G------------~~vv~v~~~~~~~~------------d~~~L~~~i~---~~t~ 205 (474)
T 1wyu_B 154 RTRRVVLVPD-SAHGSNPATASMAG------------YQVREIPSGPEGEV------------DLEALKRELG---PHVA 205 (474)
T ss_dssp TTCCEEEEET-TSCTHHHHHHHHTT------------CEEEEECBCTTSSB------------CHHHHHHHCS---TTEE
T ss_pred cCCCEEEEeC-CcChhhHHHHHHCC------------CEEEEecCCCCCCc------------CHHHHHHhhC---CCce
Confidence 3556788776 55565444433222 23345554433322 8899999985 5688
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCC----Cc
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITG----GY 277 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~g----G~ 277 (430)
+|++++ ++ ++|.+. +.+++|.++|++||+++|+||+|... ..|.. ....+ .+|++++ +|.+++ |+
T Consensus 206 ~v~~~~-pn-~~G~~~---~~l~~i~~l~~~~g~~li~Dea~~~~-~~g~~-~~~~~--g~di~~~s~~K~~~~p~g~gG 276 (474)
T 1wyu_B 206 ALMLTN-PN-TLGLFE---RRILEISRLCKEAGVQLYYDGANLNA-IMGWA-RPGDM--GFDVVHLNLHKTFTVPHGGGG 276 (474)
T ss_dssp EEEECS-SC-TTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGG-TTTTC-CHHHH--TCSEEECCTTTTTCCCCTTSC
T ss_pred EEEEEC-CC-CCcccC---CCHHHHHHHHHHcCCEEEEeCchhhh-hccCC-CcccC--CCcEEEEeCccccccCCCCCC
Confidence 888887 75 578662 22999999999999999999999632 22211 11112 3788876 798753 23
Q ss_pred cccEEEEEcHHHHHhhhcc-----CC--------cccccccCCCCCCHHHHHHHHHHHHHHhhcCH---HHHHHHHHHHH
Q psy14484 278 LPLSLVMTTDKIYNSIYYK-----NN--------INIFLHSHSYSGNPLACCAALATLEIFNKDNI---LQRISQDMKKI 341 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~-----~~--------~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~---~~~~~~~~~~l 341 (430)
.++|++++++++++.+... +. ........+++++++++.++.+.++.+..+.+ .+++.++++++
T Consensus 277 ~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 277 PGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp CCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999887766410 00 00000112344678888888888875443333 66777888888
Q ss_pred HHHHHchhcCCCeeeEeecceE--EEEEEeecCCccchhHHHHHHHHHHHCCcEEee------cCCEEEEeCCCCCCHHH
Q psy14484 342 TKALTSLITHPKIINFRQKGMI--WAFDVIIEDPEQIETFSKKFFVAALKNELLLRP------IGNTVYLMPPYILNKNE 413 (430)
Q Consensus 342 ~~~l~~l~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~------~~~~lR~~~~~~~t~e~ 413 (430)
.+.|+++ ...... +.+.+ +.+.+. .+. . +..++++|.++||.+.. ..+.+||+++..+++++
T Consensus 357 ~~~L~~~-g~~~~~---~~~~~~~~~~~~~-~~~--~---~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~ 426 (474)
T 1wyu_B 357 KELLKEK-GYRVPY---DGPSMHEFVAQPP-EGF--R---ALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKET 426 (474)
T ss_dssp HHHHHHT-TCBCSS---CSSCCSCEEEBCS-TTC--C---HHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHH
T ss_pred HHHHhhc-CcEecC---CCCcceEEEEEcC-CCC--C---HHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHH
Confidence 8888775 322211 11122 233332 111 1 36799999999997532 14689999998899999
Q ss_pred HHHHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQTFN 426 (430)
Q Consensus 414 i~~~~~~l~~~l~ 426 (430)
+++++++|++++.
T Consensus 427 id~~~~~L~~~~~ 439 (474)
T 1wyu_B 427 LEAFAEAMGALLK 439 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 167
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.91 E-value=1.7e-22 Score=195.51 Aligned_cols=288 Identities=11% Similarity=0.021 Sum_probs=193.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++++. +++++++||++|+..+++.+.. ++++|++.++.||+..........
T Consensus 61 r~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~l~~~~~--------~gd~vl~~~~~~~~~~~~~~~~~~---- 126 (398)
T 1gc0_A 61 RISNPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLLR--------PGDEVLLGNTLYGCTFAFLHHGIG---- 126 (398)
T ss_dssp --CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC--------TTCEEEEESSCCSHHHHHHHHTGG----
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhc--------CCCEEEEeCCCchhHHHHHHHHHH----
Confidence 45778899999999999953 4778888899999999998753 567899999999886433211110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
.......+++.. |+++++++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 127 -----~~g~~~~~~~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----l~~i~~l~ 176 (398)
T 1gc0_A 127 -----EFGVKLRHVDMA-----------------DLQALEAAMT---PATRVIYFES-PANPNMHMAD----IAGVAKIA 176 (398)
T ss_dssp -----GGTCEEEEECTT-----------------CHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHH
T ss_pred -----HcCCEEEEECCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCccccc----HHHHHHHH
Confidence 111223344332 7889998885 5789999999 9999998876 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCcccc-EEEEEcHHHHH-hhhccCCccccccc-CCCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPL-SLVMTTDKIYN-SIYYKNNINIFLHS-HSYS 309 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~i-g~~~~~~~~~~-~~~~~~~~~~~~~~-~t~~ 309 (430)
+++|+++|+||+|+.+ ..+... ..+....+.+++|.++++..|+ |+++++++.++ .+.. .... .+..
T Consensus 177 ~~~~~~li~D~~~~~~-~~~~~~---~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~------~~~~~~~~~ 246 (398)
T 1gc0_A 177 RKHGATVVVDNTYCTP-YLQRPL---ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ------GLKDMTGAV 246 (398)
T ss_dssp GGGTCEEEEECTTTHH-HHCCGG---GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT------HHHHHTCCC
T ss_pred HHcCCEEEEECCCccc-ccCCch---hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH------HhhccCCCC
Confidence 9999999999999733 222211 2233334447889999744687 88999887655 3443 1222 3345
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCe------e----eEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKI------I----NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~------~----~~~~~g~~~~~~~~~~~~~ 374 (430)
.+++.++++.++++.+ +...++..++.+.+.+.|++... ++.+ . ..++.|.++.+++. .+
T Consensus 247 ~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-~~-- 321 (398)
T 1gc0_A 247 LSPHDAALLMRGIKTL--NLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK-GG-- 321 (398)
T ss_dssp CCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEET-TH--
T ss_pred CCHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEEC-CC--
Confidence 6788777777777643 23445566667777777765311 1111 0 01356888888876 31
Q ss_pred cchhHHHHHHHHHHHCCcEEee---c----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLRP---I----------------------------GNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~---~----------------------------~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
.....+.+.+.|+.... + .+.+|++++...++++|+.+.++|++
T Consensus 322 -----~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 322 -----IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp -----HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 12344555566665432 1 27899999999999999999888876
Q ss_pred H
Q psy14484 424 T 424 (430)
Q Consensus 424 ~ 424 (430)
+
T Consensus 397 ~ 397 (398)
T 1gc0_A 397 S 397 (398)
T ss_dssp H
T ss_pred c
Confidence 4
No 168
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=3.5e-23 Score=198.61 Aligned_cols=307 Identities=14% Similarity=0.182 Sum_probs=198.6
Q ss_pred HHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEEEEc
Q psy14484 55 INKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFICLQ 133 (430)
Q Consensus 55 v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl~~~ 133 (430)
+.+++.+.+.... .+..+...++++.++++++ .+++++++||++|++.+++.+ .. ++++|++..
T Consensus 21 ~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~~~~~~~~~--------~gd~v~~~~ 85 (374)
T 3uwc_A 21 YLNDLREFIKTAD-----FTLGAELEKFEKRFAALHN--APHAIGVGTGTDALAMSFKMLNIG--------AGDEVITCA 85 (374)
T ss_dssp HHHHHHHHHHHTC-----CSSCHHHHHHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHTTCC--------TTCEEEEES
T ss_pred HHHHHHHHHHcCC-----cccChhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHcCCC--------CCCEEEECC
Confidence 6666666655432 3456788899999999995 458999999999999999877 33 568899999
Q ss_pred CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccccc
Q psy14484 134 NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQC 213 (430)
Q Consensus 134 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~ 213 (430)
++|++........+ .+...++.+..... |+++++++++ +++++|+ | . +
T Consensus 86 ~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~------------d~~~l~~~~~---~~~~~v~--~-~-n 133 (374)
T 3uwc_A 86 NTFIASVGAIVQAG-------------ATPVLVDSENGYVI------------DPEKIEAAIT---DKTKAIM--P-V-H 133 (374)
T ss_dssp SSCHHHHHHHHHTT-------------CEEEEECBCTTSSB------------CGGGTGGGCC---TTEEEEC--C-B-C
T ss_pred CccHHHHHHHHHcC-------------CEEEEEecCCCCCc------------CHHHHHHhCC---CCceEEE--E-e-C
Confidence 99988654332211 22334444322222 6788887775 4677776 4 4 4
Q ss_pred CCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCC-CccccEEEEEcH-
Q psy14484 214 AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITG-GYLPLSLVMTTD- 287 (430)
Q Consensus 214 ~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~g-G~~~ig~~~~~~- 287 (430)
++|...+ +++|.++|++||+++|+||+|+.+.. +.....+..+|++++| |.+++ | ..|+++.++
T Consensus 134 ~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~~~s~~~~K~l~~~g--~~g~~~~~~~ 203 (374)
T 3uwc_A 134 YTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDKFVGSWGQFACFSLHPLKNLNVWS--DAGVIITHSD 203 (374)
T ss_dssp GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTEETTSSSSEEEEECSSSSSSCCSS--CCEEEEESCH
T ss_pred CcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCeeccccccEEEEeCCCCCcCCccc--eeEEEEeCCH
Confidence 5676666 99999999999999999999983211 2223344457988877 99987 6 277777764
Q ss_pred HHHHhhhcc---CCccccc---ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-CCCeeeEe-e
Q psy14484 288 KIYNSIYYK---NNINIFL---HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFR-Q 359 (430)
Q Consensus 288 ~~~~~~~~~---~~~~~~~---~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~~~~~~-~ 359 (430)
++.+.+..- +....+. .+.++..+++.++.+...++.+ +++.++.+++.+++.+.|+++.. ........ .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 281 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL--ETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGV 281 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH--HHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTE
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCC
Confidence 555444320 0000011 1223333555444444333322 34667778888888888877632 11111111 1
Q ss_pred cceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC----------------------------CEEEEeCCCCCCH
Q psy14484 360 KGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----------------------------NTVYLMPPYILNK 411 (430)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~----------------------------~~lR~~~~~~~t~ 411 (430)
...++.+.+. .. . ...+.+.|.++||.+.+.. +.+|++++..+|+
T Consensus 282 ~~~~~~~~~~-~~----~--~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~ 354 (374)
T 3uwc_A 282 YHVFHIYVLR-VK----Y--RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTE 354 (374)
T ss_dssp ECCCSSEEEE-ET----T--HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCH
T ss_pred ceeeEEEEEE-cC----C--HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCH
Confidence 1222222222 11 1 3679999999999887653 6899999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy14484 412 NEIQHMTSAIFQTFNE 427 (430)
Q Consensus 412 e~i~~~~~~l~~~l~~ 427 (430)
+||++++++|++++++
T Consensus 355 edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 355 EEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998865
No 169
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.91 E-value=3.6e-23 Score=200.70 Aligned_cols=331 Identities=11% Similarity=0.055 Sum_probs=208.7
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHh-hccccc--cC-CCCCHHHHH----HHHHHHhhcCCCCCeEEEcCCchH
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLN-KLEHVM--LS-NLTHKPVIK----LSEKLSSLTQYKLGHCFYGSDGAS 105 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-~~~~~~--~~-~~~~~~~~~----l~~~l~~~~~~~~~~v~~~~sgte 105 (430)
+.++|+.++ +++ +|++++++.+++. .....+ .. ....+...+ +++++++.++.+ ...+++++|++
T Consensus 24 ~~~~~~~~~---~~~---~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~-~~~i~~~sGt~ 96 (405)
T 2vi8_A 24 AKIELIASE---NFV---SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAE-HANVQPHSGAQ 96 (405)
T ss_dssp HSEECCTTC---CCC---CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS-EEECCCSSHHH
T ss_pred cceeeccCc---ccC---CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC-ceEEEecCcHH
Confidence 457787554 333 8999999999875 322111 10 111222333 456899998644 23444567799
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhh--ccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL--AVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANE 182 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 182 (430)
|++.+++++.. +++.|++.+++|+.+..... ...+ .. .....++.. ..+..
T Consensus 97 a~~~a~~~~~~--------~gd~Vl~~~~~~~~~~~~~~~~~~~g-----~~-----~~~~~~~~~~~~~~~-------- 150 (405)
T 2vi8_A 97 ANMAVYFTVLE--------HGDTVLGMNLSHGGHLTHGSPVNFSG-----VQ-----YNFVAYGVDPETHVI-------- 150 (405)
T ss_dssp HHHHHHHHHCC--------TTCEEEEECGGGTCCTTTTCTTSHHH-----HH-----SEEEEECBCTTTCSB--------
T ss_pred HHHHHHHHhcC--------CCCEEEEecccccchhcccchhhhcc-----ce-----eEEEecccccccCCc--------
Confidence 99999998843 56788888887765422111 1111 00 011222221 22222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~ 262 (430)
|+++|++++++. ++++|+++| .+ .|...+ +++|.++|++||+++|+||+|+ ++..+... ....+
T Consensus 151 ----d~~~l~~~i~~~--~~~~v~~~~-~~--~~~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~--~~~~~ 214 (405)
T 2vi8_A 151 ----DYDDVREKARLH--RPKLIVAAA-AA--YPRIID----FAKFREIADEVGAYLMVDMAHI-AGLVAAGL--HPNPV 214 (405)
T ss_dssp ----CHHHHHHHHHHH--CCSEEEECC-SS--CCSCCC----HHHHHHHHHHHTCEEEEECTTT-HHHHHTTS--SCCST
T ss_pred ----CHHHHHHHHHhc--CCeEEEEeC-CC--CCccCC----HHHHHHHHHHcCCEEEEEcccc-ccccccCc--CCCcc
Confidence 889999999742 456777765 32 232333 8999999999999999999998 44332211 11111
Q ss_pred -CCcee--eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHHHhh---cCHHHHHH
Q psy14484 263 -WPDFL--CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEIFNK---DNILQRIS 335 (430)
Q Consensus 263 -~~d~~--~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~~~~---~~~~~~~~ 335 (430)
.+|++ +++|+++|+ .. |++++++++++.+.. .....++++ ++..++++.++++.+.. ++..++++
T Consensus 215 ~~~di~~~s~sK~~~g~-~g-G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~ 286 (405)
T 2vi8_A 215 PYAHFVTTTTHKTLRGP-RG-GMILCQEQFAKQIDK------AIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVV 286 (405)
T ss_dssp TTCSEEEEESSSTTCCC-SC-EEEEECHHHHHHHHH------HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred ccCCEEEEeccccCCCC-CC-eEEEEcHHHHHHHHh------hhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 46776 788999864 23 999999888877654 111223333 56666666677776543 45677788
Q ss_pred HHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEe
Q psy14484 336 QDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLM 404 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~ 404 (430)
++.+++.+.|+++ ..+... ..+.+.++++.+. .... . ...+.+.|.++||.+.++ ++++|++
T Consensus 287 ~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~-~~~~--~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis 359 (405)
T 2vi8_A 287 DNAKRLASALQNE-GFTLVS-GGTDNHLLLVDLR-PQQL--T--GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIG 359 (405)
T ss_dssp HHHHHHHHHHHHT-TCEEGG-GSCSSSEEEEECG-GGTC--C--HHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEE
T ss_pred HHHHHHHHHHHhC-CCeEec-CCCCceEEEEEcc-CCCC--C--HHHHHHHHHHcCceeccCcCccccCCCCCCCceEEe
Confidence 8888888888775 322211 1235677777765 3111 1 356888898999998873 3589999
Q ss_pred CCC----CCCHHHHHHHHHHHHHHHHHh
Q psy14484 405 PPY----ILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 405 ~~~----~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++. .++++++++++++|++++.++
T Consensus 360 ~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 360 TAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred eeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 886 578999999999999988654
No 170
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.91 E-value=2.5e-23 Score=198.41 Aligned_cols=332 Identities=13% Similarity=0.080 Sum_probs=203.0
Q ss_pred EEEecccccccccCCC-CCHHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHH
Q psy14484 35 RYLDAISSWWVNLFGH-SNSYINKALKNQLNKLEH--VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVAL 111 (430)
Q Consensus 35 ~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al 111 (430)
+++|..++ +.+||. .+|.+.+++++++..... ....+...+...++++++++.++ .+..++++||++|+..++
T Consensus 4 ~~~~~~~~--~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~--~~~~i~~~~G~~a~~~al 79 (357)
T 3lws_A 4 RLRTSFQQ--TTGQISGHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLG--MDDAVFFPSGTMAQQVAL 79 (357)
T ss_dssp HHHHHHHT--CSEESSBSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHH
T ss_pred hhhhHHHh--hcccccCCCCCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhC--CCcEEEecCcHHHHHHHH
Confidence 45552333 456666 478888888887775321 11112234667889999999985 356677799999999999
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHH
Q psy14484 112 KMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191 (430)
Q Consensus 112 ~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (430)
++++.. ++..+|+.++.+|.+....... ... .+...+++|...... |+++|
T Consensus 80 ~~~~~~-------gd~~~vi~~~~~~~~~~~~~~~---------~~~--~g~~~~~v~~~~~~~-----------d~~~l 130 (357)
T 3lws_A 80 RIWSDE-------TDNRTVAYHPLCHLEIHEQDGL---------KEL--HPIETILVGAADRLM-----------TLDEI 130 (357)
T ss_dssp HHHHHH-------HTCCEEEECTTCHHHHSSTTHH---------HHH--SSCEEEECSCTTSCC-----------CHHHH
T ss_pred HHHhhc-------CCCcEEEecccceeeeeccchh---------hhc--cCcEEEEecCCCCCc-----------CHHHH
Confidence 988763 3332555666666432210000 000 011222333211111 77887
Q ss_pred HHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-----CCCCcccccccccCCCCCce
Q psy14484 192 EILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-----GCGRTGKFFACEHAEIWPDF 266 (430)
Q Consensus 192 e~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-----g~g~~g~~~~~~~~~~~~d~ 266 (430)
+++ .+ ++++++++ ++|++|...++.+.+++|.++|++||+++|+||+|. .+++....+. ...|+
T Consensus 131 ~~~----~~-~~~v~~~~-p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-----~~~d~ 199 (357)
T 3lws_A 131 KAL----PD-IACLLLEL-PQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-----GLFDS 199 (357)
T ss_dssp HTC----CS-CSEEEEES-SBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-----TTSSE
T ss_pred hcC----cC-cceEEEEc-ccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-----hcCCE
Confidence 765 22 67788888 777764477889999999999999999999999875 1122111111 12344
Q ss_pred --eeeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q psy14484 267 --LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKA 344 (430)
Q Consensus 267 --~~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~ 344 (430)
.++||++++. ..|++++++++++.+.. .+....+..+..++. ++++.++|+.. .+...+..++.+++.+.
T Consensus 200 ~~~s~sK~~~~~--~gg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~l~~~--~~~~~~~~~~~~~l~~~ 271 (357)
T 3lws_A 200 IYISFYKGLGGI--AGAILAGPAAFCQTARI---WKRRYGGDLISLYPY-IVSADYYYELR--KDRMGQYYEQAKQLAEQ 271 (357)
T ss_dssp EEEESSSTTCCS--SCEEEEECHHHHHHHHH---HHHHTTCCCSCCHHH-HHHHHHHHHHH--TTCHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCC--ceEEEEcCHHHHHHHHH---HHHHhcCCcccchHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 4899999653 23888999998877653 011111222333333 34444556542 22234456677788888
Q ss_pred HHchhcCCCeee--EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec----CC--EEEEeCCC---CCCHHH
Q psy14484 345 LTSLITHPKIIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI----GN--TVYLMPPY---ILNKNE 413 (430)
Q Consensus 345 l~~l~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~----~~--~lR~~~~~---~~t~e~ 413 (430)
|+++ +.+.. .+..+.++++.+. ... ......+.+.|.++||.+.++ ++ .+|+++.. ..++++
T Consensus 272 L~~~---~g~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~ 344 (357)
T 3lws_A 272 FNAL---PGVHTTPEVPVSNMFHLHFD-GQA---ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQT 344 (357)
T ss_dssp HHTS---TTEEEESSSCSSSEEEEEEE-SCH---HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHH
T ss_pred HHhC---CCCeeccCCCcceEEEEEec-CCh---HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHH
Confidence 8765 43332 2456777777776 421 111357888999999998875 23 78887663 358999
Q ss_pred HHHHHHHHHHHH
Q psy14484 414 IQHMTSAIFQTF 425 (430)
Q Consensus 414 i~~~~~~l~~~l 425 (430)
+++++++|.+++
T Consensus 345 l~~al~~l~~al 356 (357)
T 3lws_A 345 RDAGFARLRQAF 356 (357)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999998765
No 171
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=3.4e-22 Score=198.63 Aligned_cols=331 Identities=10% Similarity=0.066 Sum_probs=210.1
Q ss_pred CHHHHHHHHHHHhhcc-----ccccCCCCCHHHHHHHHHHHhhcC---CCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC
Q psy14484 52 NSYINKALKNQLNKLE-----HVMLSNLTHKPVIKLSEKLSSLTQ---YKLGHCFYGSDGASAVEVALKMSFHYWYNKGF 123 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~ 123 (430)
+..+.+++.+.+.... .+....+..++++++++.+.+..+ +++++|++|+|+++|+..+++++... |.
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~----gd 178 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSG----GG 178 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCC----CG
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCC----CC
Confidence 4455566666666532 112223344677888888877653 46789999999999999999977541 11
Q ss_pred CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC--CCCCCCCChhHHHHHHHHHHHHHHHhCCC-
Q psy14484 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEIARCAIFDLEILLKKNHN- 200 (430)
Q Consensus 124 ~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~~- 200 (430)
++++.|++..|+|+.+.......+. ....++.... +.. |+++|++++++...
T Consensus 179 ~~~d~Vlv~~p~y~~~~~~~~~~g~-------------~~v~~~~~~~~~~~~------------d~~~le~~l~~~~~~ 233 (498)
T 3ihj_A 179 KSRTGVMIPIPQYPLYSAVISELDA-------------IQVNYYLDEENCWAL------------NVNELRRAVQEAKDH 233 (498)
T ss_dssp GGSEEEEEEESCCTHHHHHHHHTTC-------------EEEEEECBGGGTTBC------------CHHHHHHHHHHHTTT
T ss_pred CCCCEEEEeCCCchhHHHHHHHcCC-------------EEEEeeccccccCCC------------CHHHHHHHHHhhhcc
Confidence 1135899999999877544333221 1222322211 111 88999999986421
Q ss_pred -CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc--cccccc----CC----CCCc---e
Q psy14484 201 -KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK--FFACEH----AE----IWPD---F 266 (430)
Q Consensus 201 -~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~--~~~~~~----~~----~~~d---~ 266 (430)
+++++++.. ++|++| ...+.+.+++|.++|++||+++|+||+|..+.+.+. ...+.. .+ -... +
T Consensus 234 ~~~k~i~l~n-p~NPTG-~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 311 (498)
T 3ihj_A 234 CDPKVLCIIN-PGNPTG-QVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASF 311 (498)
T ss_dssp SEEEEEEEES-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEE
T ss_pred CCCeEEEEEC-CCCCCC-CcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEE
Confidence 477777777 888888 566778899999999999999999999997654332 111111 00 0111 3
Q ss_pred eeeecccC--CCccccEEEE---EcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHH-----------HHh-hcC
Q psy14484 267 LCLSKGIT--GGYLPLSLVM---TTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE-----------IFN-KDN 329 (430)
Q Consensus 267 ~~~sK~l~--gG~~~ig~~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~-----------~~~-~~~ 329 (430)
.+|||.+. .| +|+|+++ .++++++.+.. ......+.+.+++.++.++++ .++ ...
T Consensus 312 ~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~-------~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~ 383 (498)
T 3ihj_A 312 HSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVK-------LLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKES 383 (498)
T ss_dssp EESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHH-------HHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHH
T ss_pred eccccccccCcc-cceEEEEEecCCHHHHHHHHH-------HHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHH
Confidence 37899994 46 7999998 58888887765 122344566777766555542 111 133
Q ss_pred HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEE-EEeecCCcc--------chhHHHH--HHHHHHHCCcEEeec-
Q psy14484 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAF-DVIIEDPEQ--------IETFSKK--FFVAALKNELLLRPI- 397 (430)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~--------~~~~a~~--~~~~l~~~Gv~~~~~- 397 (430)
..++++++.+++.+.|+++ +++....++|.++.| .+. ..... .. .+. +.+.|.+.||.+.|+
T Consensus 384 ~~~~l~~~~~~l~~~L~~~---~g~~~~~p~gg~~~~~~l~-~p~~~~~~~~~~g~~--~~~~~~~~ll~~~gI~v~pG~ 457 (498)
T 3ihj_A 384 VLGNLAKKAKLTEDLFNQV---PGIHCNPLQGAMYAFPRIF-IPAKAVEAAQAHQMA--PDMFYCMKLLEETGICVVPGS 457 (498)
T ss_dssp HHHHHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEEC-CCHHHHHHHHHTTSC--HHHHHHHHHHHHHCBCCEEGG
T ss_pred HHHHHHHHHHHHHHHHhcC---CCcEecCCCeEEEEEEecc-CchhhhHHHHhcCCC--cHHHHHHHHHHHCCEEEEeCc
Confidence 4566677777777777654 555555566666554 342 11000 00 122 344556789999874
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 398 -------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 398 -------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
...+|+++ ..+++++++++++|++++.+..
T Consensus 458 ~f~~~~~~~~~Ris~--~~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 458 GFGQREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp GTCCCTTCCBEEEEC--CSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEe--CCCHHHHHHHHHHHHHHHHHHH
Confidence 14789976 4899999999999999987653
No 172
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.90 E-value=3.4e-22 Score=191.75 Aligned_cols=313 Identities=14% Similarity=0.139 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHH-hhhhcCCCCCcEE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFH-YWYNKGFLNKKKF 129 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~-~~~~~g~~~~~~v 129 (430)
-+|++++++.+++.... ..+.+...++++.+++.++. +++++++||++|++.+++++.. . .++++|
T Consensus 11 ~~~~v~~a~~~~~~~~~-----~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~~~~~~------~~gd~V 77 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSKQ-----LTQGKRSLLFEEALCEFLGV--KHALVFNSATSALLTLYRNFSEFS------ADRNEI 77 (375)
T ss_dssp CCHHHHHHHHHHHTSSC-----CSSSHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHSSCCC------TTSCEE
T ss_pred CCHHHHHHHHHHHHcCc-----ccCChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhcccC------CCCCEE
Confidence 58999999999886532 22356778999999999953 4999999999999999998731 1 156789
Q ss_pred EEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Q psy14484 130 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209 (430)
Q Consensus 130 l~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 209 (430)
++.+++|++........+ .....++.+.... .|+++|++.++ +++++|++..
T Consensus 78 l~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~------------~d~~~l~~~i~---~~~~~v~~~~ 129 (375)
T 2fnu_A 78 ITTPISFVATANMLLESG-------------YTPVFAGIKNDGN------------IDELALEKLIN---ERTKAIVSVD 129 (375)
T ss_dssp EECSSSCTHHHHHHHHTT-------------CEEEECCBCTTSS------------BCGGGSGGGCC---TTEEEEEEEC
T ss_pred EECCCccHhHHHHHHHCC-------------CEEEEeccCCCCC------------CCHHHHHhhcC---cCceEEEEeC
Confidence 999999988754333211 1223333322111 16788887774 4677776655
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCc--eeeee--cccCCCccccEEEEE
Q psy14484 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD--FLCLS--KGITGGYLPLSLVMT 285 (430)
Q Consensus 210 ~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d--~~~~s--K~l~gG~~~ig~~~~ 285 (430)
+ +|...+ +++|.++|++||+++|+||+|+ ++..... ...+..+| +.++| |.++.| +|++++
T Consensus 130 -~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~~~---~~~~~~~~i~~~s~s~~K~~~~g---~g~~~~ 194 (375)
T 2fnu_A 130 -Y---AGKSVE----VESVQKLCKKHSLSFLSDSSHA-LGSEYQN---KKVGGFALASVFSFHAIKPITTA---EGGAVV 194 (375)
T ss_dssp -G---GGCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCEETT---EETTSSSSEEEEECCTTSSSCCS---SCEEEE
T ss_pred -C---cCCccC----HHHHHHHHHHcCCEEEEECccc-cCCeECC---eeccccCCeEEEeCCCCCCcccc---CceEEE
Confidence 4 676766 8999999999999999999997 3322111 11222234 45788 988653 677777
Q ss_pred c--HHHHHhhhccCCcc-------cc---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCC
Q psy14484 286 T--DKIYNSIYYKNNIN-------IF---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPK 353 (430)
Q Consensus 286 ~--~~~~~~~~~~~~~~-------~~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 353 (430)
+ +++.+.+....... .+ ..+.++..+++.++++...++.+ ++..++.+++.+++.+.|+++ +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~---~~ 269 (375)
T 2fnu_A 195 TNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQKREEAALTYDRIFKDN---PY 269 (375)
T ss_dssp ESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTTC---SS
T ss_pred eCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcC---CC
Confidence 3 66766554310000 00 01122344566555444443322 345677778888888888765 32
Q ss_pred eeeEe------ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----c----------------------CCEE
Q psy14484 354 IINFR------QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I----------------------GNTV 401 (430)
Q Consensus 354 ~~~~~------~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~----------------------~~~l 401 (430)
+.... ..+.++.+.+. ..... . +..+.+.|.++||.+.. . .+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~--~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 345 (375)
T 2fnu_A 270 FTPLHPLLKDKSSNHLYPILMH-QKFFT-C--KKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEI 345 (375)
T ss_dssp EEESGGGCSSCCCCSCEEEEEC-GGGGG-G--HHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEE
T ss_pred ccccCCCCCCCcceEEEEEEeC-ccccc-h--HHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEE
Confidence 22111 12334455555 31100 1 46789999999998872 1 1579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 402 YLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 402 R~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
|++++..++++++++++++|+++++++
T Consensus 346 Ri~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 346 SLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988754
No 173
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=5.8e-22 Score=191.41 Aligned_cols=311 Identities=14% Similarity=0.084 Sum_probs=205.9
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFI 130 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl 130 (430)
+|++++++.+++.... ....+...++++.+++.++ .+++++++||++|++.+++++ .. +++.|+
T Consensus 19 ~~~~~~a~~~~~~~~~-----~~~~~~~~~l~~~la~~~~--~~~~~~~~~gt~al~~~~~~~~~~--------~gd~Vl 83 (393)
T 1mdo_A 19 GAEELAAVKTVLDSGW-----ITTGPKNQELEAAFCRLTG--NQYAVAVSSATAGMHIALMALGIG--------EGDEVI 83 (393)
T ss_dssp CHHHHHHHHHHHHHTC-----CSSSHHHHHHHHHHHHHHC--CSEEEEESCHHHHHHHHHHHTTCC--------TTCEEE
T ss_pred CHHHHHHHHHHHhcCC-----cCCChHHHHHHHHHHHHhC--CCcEEEecChHHHHHHHHHHcCCC--------CCCEEE
Confidence 5889999998887632 2345777899999999994 458999999999999999987 32 567899
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 209 (430)
+.+++|++....... .+ .+...++.+.. +.. |+++|+++++ +++++|++++
T Consensus 84 ~~~~~~~~~~~~~~~-~g------------~~~~~v~~~~~~~~~------------d~~~l~~~l~---~~~~~v~~~~ 135 (393)
T 1mdo_A 84 TPSMTWVSTLNMIVL-LG------------ANPVMVDVDRDTLMV------------TPEHIEAAIT---PQTKAIIPVH 135 (393)
T ss_dssp EESSSCHHHHHHHHH-TT------------CEEEEECBCTTTCCB------------CHHHHHHHCC---TTEEEECCBC
T ss_pred eCCCccHhHHHHHHH-CC------------CEEEEEeccCCcCCC------------CHHHHHHhcC---CCceEEEEeC
Confidence 999999876433222 11 22334443321 112 7899998885 4678887655
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee----cccCCCccccEEEE
Q psy14484 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVM 284 (430)
Q Consensus 210 ~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~ 284 (430)
++|...+ +++|.++|+++|+++|+||+|+ |+...+.. ++. +|++++| |.+++| ++|+++
T Consensus 136 ----~~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d~~~~S~~k~K~l~~~--~~g~~~ 199 (393)
T 1mdo_A 136 ----YAGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RGTAIFSFHAIKNITCA--EGGIVV 199 (393)
T ss_dssp ----GGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SSEEEEECCTTSSSCSS--SCEEEE
T ss_pred ----CCCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CCeEEEeCCCCCccccc--cceEEE
Confidence 3565555 9999999999999999999998 33233321 222 7888766 888775 689999
Q ss_pred Ec-HHHHHhhhccCCcc-------------ccc-----ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q psy14484 285 TT-DKIYNSIYYKNNIN-------------IFL-----HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 345 (430)
Q Consensus 285 ~~-~~~~~~~~~~~~~~-------------~~~-----~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l 345 (430)
.+ +++.+.+....... +.. .+..+..+++.++++...++.+ ++..++.+++.+++.+.|
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~l~~~L 277 (393)
T 1mdo_A 200 TDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKL--DALNARRAAIAAQYHQAM 277 (393)
T ss_dssp ESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 86 77776654310000 000 0111234666666665555533 345666777888888888
Q ss_pred HchhcCCCe--e--eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec------------------------
Q psy14484 346 TSLITHPKI--I--NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI------------------------ 397 (430)
Q Consensus 346 ~~l~~~~~~--~--~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~------------------------ 397 (430)
+++. .... . ..+..+.++++.+. ....... ..++.+.|.++||.+.++
T Consensus 278 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~--~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (393)
T 1mdo_A 278 ADLP-FQPLSLPSWEHIHAWHLFIIRVD-EARCGIT--RDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEW 353 (393)
T ss_dssp HTSS-CEECCCCSSCEECCCSCEEEECC-HHHHSSC--HHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHH
T ss_pred hcCC-cccccCCCCCCCceeEEEEEEec-ccccccC--HHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHH
Confidence 7652 1111 1 12233456666665 3000001 367999999999988763
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
...+|++++..+|++|+++++++|++++..
T Consensus 354 ~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 354 NSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp HHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred HHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 127999999889999999999999988753
No 174
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.90 E-value=9e-23 Score=197.73 Aligned_cols=286 Identities=14% Similarity=0.079 Sum_probs=192.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
...+..+++++.++++++. +++++++||++|+..+++.+.. +++.|++.++.|+++......
T Consensus 59 ~~~~~~~~l~~~ia~~~g~--~~~i~~~~g~~ai~~~~~~l~~--------~gd~Vl~~~~~y~~~~~~~~~-------- 120 (404)
T 1e5e_A 59 LGNPTVSNLEGKIAFLEKT--EACVATSSGMGAIAATVLTILK--------AGDHLISDECLYGCTHALFEH-------- 120 (404)
T ss_dssp TCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC--------TTCEEEEESCCCHHHHHHHHT--------
T ss_pred CcChHHHHHHHHHHHHhCC--CcEEEeCChHHHHHHHHHHHhC--------CCCEEEEeCCCchhHHHHHHH--------
Confidence 4467788999999999953 5888899999999999987753 567899999999875331000
Q ss_pred hhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICN 233 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~ 233 (430)
.......+...++.. |+++|+++++ +++++|++++ ++|++|.+.+ +++|.++|+
T Consensus 121 -~~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~t~~v~l~~-p~NptG~v~~----l~~i~~la~ 174 (404)
T 1e5e_A 121 -ALTKFGIQVDFINTA-----------------IPGEVKKHMK---PNTKIVYFET-PANPTLKIID----MERVCKDAH 174 (404)
T ss_dssp -HHHHTTCEEEEECTT-----------------STTHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHHH
T ss_pred -HHHHcCCEEEEECCC-----------------CHHHHHHhcC---CCCcEEEEEC-CCCCCCcccC----HHHHHHHHH
Confidence 011112233444432 5678888885 5789999999 9999998776 999999999
Q ss_pred h-cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEcHHHHH-hhhccCCcccccccC-C
Q psy14484 234 N-YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTTDKIYN-SIYYKNNINIFLHSH-S 307 (430)
Q Consensus 234 ~-~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~~~~~~-~~~~~~~~~~~~~~~-t 307 (430)
+ +|+++|+||+|+.+... ... + ++ .|++ ++||.+++...++ |++++++++++ .+.. ..... +
T Consensus 175 ~~~~~~li~De~~~~~~~~-~~~--~-~~--~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~------~~~~~~g 242 (404)
T 1e5e_A 175 SQEGVLVIADNTFCSPMIT-NPV--D-FG--VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMV------GIKDITG 242 (404)
T ss_dssp TSTTCEEEEECTTTCTTTC-CGG--G-GT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT------CCCCCCC
T ss_pred hhcCCEEEEECCCchhhhC-Ccc--c-cC--CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHH------HHHhCCC
Confidence 9 99999999999866432 121 1 23 4555 6889998744787 99999998877 6664 11222 3
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-----------cCCCeee----EeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-----------THPKIIN----FRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-----------~~~~~~~----~~~~g~~~~~~~~~~~ 372 (430)
...+++.+.++.++++.+ +...++..++.+.+.+.+++.. ..|.+.. .++.|.++.|++. +.
T Consensus 243 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~-~~ 319 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTL--NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILK-SG 319 (404)
T ss_dssp CCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEET-TH
T ss_pred CCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeC-CC
Confidence 456788777777777533 1233344555555555554321 1122111 2345889988776 31
Q ss_pred CccchhHHHHHHHHHHHCCcEEeec-------------------------------CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAALKNELLLRPI-------------------------------GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~Gv~~~~~-------------------------------~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.....+.+.+.||++... .+.+|++++. |++++++++|
T Consensus 320 -------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l 388 (404)
T 1e5e_A 320 -------FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADF 388 (404)
T ss_dssp -------HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHH
Confidence 123445566668743320 3689999886 8899999999
Q ss_pred HHHHHHhh
Q psy14484 422 FQTFNEVI 429 (430)
Q Consensus 422 ~~~l~~~~ 429 (430)
++++..++
T Consensus 389 ~~al~~~~ 396 (404)
T 1e5e_A 389 KQGLDALL 396 (404)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
No 175
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=1.4e-22 Score=195.67 Aligned_cols=310 Identities=15% Similarity=0.138 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFIC 131 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl~ 131 (430)
|++.+++.+.+....+ ....+...++++.+++.++ .+++++++||++|++.+++++ .. +++.|++
T Consensus 36 ~~~~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~~--~~~~i~~~~gt~al~~~l~~~~~~--------~gd~vl~ 101 (391)
T 3dr4_A 36 GNERDYVLECMDTTWI----SSVGRFIVEFEKAFADYCG--VKHAIACNNGTTALHLALVAMGIG--------PGDEVIV 101 (391)
T ss_dssp SSHHHHHHHHHHHTCC----SSCSHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHTCC--------TTCEEEE
T ss_pred HHHHHHHHHHHHcCCc----cCCChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHcCCC--------CcCEEEE
Confidence 5677887777655221 1256788899999999995 458999999999999999987 32 5678999
Q ss_pred EcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccc
Q psy14484 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPL 210 (430)
Q Consensus 132 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (430)
.+++|++........+ .....++.+ +.+.. |+++|+++++ +++++|++
T Consensus 102 ~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------d~~~l~~~~~---~~~~~v~~--- 150 (391)
T 3dr4_A 102 PSLTYIASANSVTYCG-------------ATPVLVDNDPRTFNL------------DAAKLEALIT---PRTKAIMP--- 150 (391)
T ss_dssp ESSSCTHHHHHHHHTT-------------CEEEEECBCTTTCSB------------CGGGSGGGCC---TTEEEECC---
T ss_pred CCCchHHHHHHHHHCC-------------CEEEEEecCccccCc------------CHHHHHHhcC---CCceEEEE---
Confidence 9999998754433322 222344433 22222 6778887774 46777763
Q ss_pred cccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCCCccccEEEEEc
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVMTT 286 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~~~ 286 (430)
. +++|...+ +++|.++|+++|+++|+||+|+ +|... .-...+..+|+.++| |++++| +.|+++.+
T Consensus 151 ~-n~tG~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~~~~di~~~S~s~~K~l~~g--~gg~~~~~ 219 (391)
T 3dr4_A 151 V-HLYGQICD----MDPILEVARRHNLLVIEDAAEA-VGATY---RGKKSGSLGDCATFSFFGNAIITTG--EGGMITTN 219 (391)
T ss_dssp B-CGGGCCCC----HHHHHHHHHHTTCEEEEECTTC-TTCEE---TTEETTSSSSEEEEECBTTSSSCCB--SCEEEEES
T ss_pred E-CCCCChhh----HHHHHHHHHHcCCEEEEECccc-ccceE---CCeeecccCCEEEEECCCCCcCCcC--CeEEEEEC
Confidence 2 35676666 9999999999999999999997 22211 111223335777777 999775 57888776
Q ss_pred H-HHHHhhhc---cCCc--cc---ccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeee-
Q psy14484 287 D-KIYNSIYY---KNNI--NI---FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN- 356 (430)
Q Consensus 287 ~-~~~~~~~~---~~~~--~~---~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~- 356 (430)
+ .+.+.+.. .+.. .. ...+..+..+++.++++...++.+ ++..++.+++.+++++.|+++ .......
T Consensus 220 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 296 (391)
T 3dr4_A 220 DDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERV--DEHLAARERVVGWYEQKLARL-GNRVTKPH 296 (391)
T ss_dssp CHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHGGG-TTSEECCC
T ss_pred CHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcC-CccccCcC
Confidence 4 45544432 0000 00 001122444555555544444432 346778888888999999876 3322211
Q ss_pred ----EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-------------------------CEEEEeCCC
Q psy14484 357 ----FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-------------------------NTVYLMPPY 407 (430)
Q Consensus 357 ----~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-------------------------~~lR~~~~~ 407 (430)
....+.++.+.+. .... .. ..++.+.|.++||.+.++. ..+|+.++.
T Consensus 297 ~~~~~~~~~~~~~i~~~-~~~~-~~--~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~ 372 (391)
T 3dr4_A 297 VALTGRHVFWMYTVRLG-EGLS-TT--RDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHA 372 (391)
T ss_dssp CCTTSCCCCSSEEEEEC-SSCS-SC--HHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCT
T ss_pred CCCCCcceeEEEEEEEC-Cccc-hh--HHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCC
Confidence 1122334455555 3111 11 3679999999999887642 478999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy14484 408 ILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 408 ~~t~e~i~~~~~~l~~~l 425 (430)
.+|++||++++++|++++
T Consensus 373 ~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 373 GLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 999999999999998653
No 176
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.90 E-value=1.9e-22 Score=194.75 Aligned_cols=341 Identities=12% Similarity=0.029 Sum_probs=207.5
Q ss_pred CEEEecccccccccCCC--CCHHHHHHHHHHH-hhc-c-ccccCCCCCHHHHHHHHHHHhhcC--CCCC--eEEEcCCch
Q psy14484 34 KRYLDAISSWWVNLFGH--SNSYINKALKNQL-NKL-E-HVMLSNLTHKPVIKLSEKLSSLTQ--YKLG--HCFYGSDGA 104 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~-~~~-~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~~--~v~~~~sgt 104 (430)
..+|||..|.....-|. ..+.|++|.. .+ +.. . .+....+..++++.+++++.+... ...+ ++++|+||+
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~ 107 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGT 107 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchH
Confidence 35688876642222232 3577778766 43 222 1 122234445666777777755432 1234 369999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-CC-CCCCCCCCChhH
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-PD-SRNINKGNSANE 182 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 182 (430)
+|+..+++++.... + +.|++.+|+|.++.......+. ..+.++. +. .+..
T Consensus 108 ~al~~~~~~l~~~~------~-d~Vlv~~P~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~-------- 159 (405)
T 3k7y_A 108 GAIFVLLEFLKMLN------V-ETLYVTNPPYINHVNMIESRGF-------------NLKYINFFDYNLIDI-------- 159 (405)
T ss_dssp HHHHHHHHHHHTTT------C-CEEEEESSCCHHHHHHHHTTTC-------------EEEEECCEETTTTEE--------
T ss_pred HHHHHHHHHHHhcC------C-CEEEEeCCCCHhHHHHHHHcCC-------------eEEEEeccccccCCc--------
Confidence 99999998877532 5 8999999999987544433222 2233333 11 1222
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---ccccc-
Q psy14484 183 IARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFACE- 258 (430)
Q Consensus 183 ~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~~- 258 (430)
|+++|++.+++.+ +.+++++.+-.+|++| ..++.+.+++|.++|++|++++|+||+|.+|...+. .....
T Consensus 160 ----d~~~l~~~l~~~~-~~~~i~l~~~~~NPTG-~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~ 233 (405)
T 3k7y_A 160 ----NYDLFLNDLRNIP-NGSSVILQISCYNPCS-VNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK 233 (405)
T ss_dssp ----CHHHHHHHHHHSC-SSCEEEECCSSCTTTC-CCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH
T ss_pred ----CHHHHHHHHHhCC-CCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH
Confidence 8899999997642 3455666540589999 678889999999999999999999999998864321 11111
Q ss_pred cCCCCCc---eeeeecccC-CCccccEEEEE---cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHH------
Q psy14484 259 HAEIWPD---FLCLSKGIT-GGYLPLSLVMT---TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF------ 325 (430)
Q Consensus 259 ~~~~~~d---~~~~sK~l~-gG~~~ig~~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~------ 325 (430)
.....+. +-+|||.++ .| +|+|++++ ++++++.+.. .-.........+.+.+++.++.++|+.-
T Consensus 234 ~~~~~~~~i~~~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~ 310 (405)
T 3k7y_A 234 FEEKNIAFSVCQSFSKNMSLYG-ERAGALHIVCKNQEEKKIVFN--NLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNW 310 (405)
T ss_dssp HHTTTCCEEEEEECTTTSCCTT-TTEEEEEEECSSHHHHHHHHH--HHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHH
T ss_pred HHhcCCcEEEEeeCCccCCCcc-ccceEEEEEeCCHHHHHHHHH--HHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHH
Confidence 1112223 337999988 57 89999864 5665544421 0000111122234566666666655421
Q ss_pred h--hcCHHHHHHHHHHHHHHHHH----chhcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC
Q psy14484 326 N--KDNILQRISQDMKKITKALT----SLITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG 398 (430)
Q Consensus 326 ~--~~~~~~~~~~~~~~l~~~l~----~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~ 398 (430)
. -....++++++.+.+.+.|+ ++ ..+ .+....++|.|+.+.-. + . +++++|.++||.+.|++
T Consensus 311 ~~~l~~~~~~~~~~R~~l~~~L~~~~~~~-g~~~~~~~~~p~gg~f~~~~l-~-----~----~~~~~L~~~gV~v~p~~ 379 (405)
T 3k7y_A 311 IKELSQLSQRITNNRILFFNKLETYQKKY-NLNYDWNVYKKQRGLFSFVPL-L-----A----KIAEHLKTHHIYIINNG 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGG-TCCCCGGGGSSCCSSEEECGG-G-----G----GGTTTTTTTTEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCCCCCccccCCceEEEecCC-C-----H----HHHHHHHHCCEeecCCC
Confidence 0 02234456777777777777 55 222 12334456665544211 1 1 23455677899999875
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
||+++ ..++++|++++++|++++++
T Consensus 380 ---Ris~a-~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 ---RINVS-GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp ---EEEGG-GCCTTHHHHHHHHHHHHHHC
T ss_pred ---eEEEe-ccCHHHHHHHHHHHHHHHhh
Confidence 88654 45788999999999998864
No 177
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.90 E-value=6.3e-23 Score=195.72 Aligned_cols=317 Identities=11% Similarity=0.030 Sum_probs=194.2
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFIC 131 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~ 131 (430)
+|++.+++.+.+.. ...+..+...++++++++.++ .+..++++||++|+..++++++.. ++..+|+
T Consensus 28 ~p~v~~ai~~~~~~-----~~~~~~~~~~~l~~~la~~~~--~~~~i~~~~g~~a~~~a~~~~~~~-------g~~~vvi 93 (359)
T 3pj0_A 28 LTEALQNIDDNLES-----DIYGNGAVIEDFETKIAKILG--KQSAVFFPSGTMAQQIALRIWADR-------KENRRVA 93 (359)
T ss_dssp HHHHTTTSCTTCBC-----CBTTBSHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHHHHH-------HTCCEEE
T ss_pred CHHHHHHHHhhccc-----CcccCCHHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHHhc-------CCCcEEE
Confidence 57777777763221 123456788899999999984 455577799999999999988763 4444666
Q ss_pred EcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc
Q psy14484 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211 (430)
Q Consensus 132 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v 211 (430)
.++.+|.+........ .........++.+ +... |+++|+++ . +++++|++++ +
T Consensus 94 ~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~-~~~~------------d~~~l~~~-~---~~~~~v~~~~-p 146 (359)
T 3pj0_A 94 YHPLSHLEIHEQDGLK---------ELQQITPLLLGTA-NQLL------------TIDDIKSL-R---EPVSSVLIEL-P 146 (359)
T ss_dssp ECTTCHHHHSSTTHHH---------HHHCCEEEECSCT-TSCC------------CHHHHHTC-S---SCCSEEEEES-S
T ss_pred EeccceeeehhcchHH---------HhcCceEEecCCc-CCCc------------CHHHHHhc-c---CCceEEEEEe-c
Confidence 6666654322110000 0001122233321 1111 78888876 2 4678888888 7
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcHHH
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTDKI 289 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~~~ 289 (430)
+|++|...++.+.+++|.++|++||+++|+||+|..+................|++ ++||+++++ .. |++++++++
T Consensus 147 ~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~-~g-g~~~~~~~l 224 (359)
T 3pj0_A 147 QREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGI-AG-AILAGNDDF 224 (359)
T ss_dssp BGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCS-SC-EEEEECHHH
T ss_pred ccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCc-ce-EEEECCHHH
Confidence 77764477888999999999999999999999875221000000010111234555 788988765 23 778889998
Q ss_pred HHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeee--EeecceEEEEE
Q psy14484 290 YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN--FRQKGMIWAFD 367 (430)
Q Consensus 290 ~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~--~~~~g~~~~~~ 367 (430)
++.+.. .+....+.++..++.+ +++..+++.. .+..++..++.+++.+.|+++ +.+.. .+..+.++++.
T Consensus 225 ~~~~~~---~~~~~~~~~~~~~~~~-~a~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~ 295 (359)
T 3pj0_A 225 VQEAKI---WKRRYGGDLISLYPYI-LSADYYFEKR--IGKMAEYFEAAKGLAERFNSC---SGVKTVPEVPVSNMFHVY 295 (359)
T ss_dssp HHHHHH---HHHHTTCCCSCCHHHH-HHHHHHHHHH--GGGHHHHHHHHHHHHHHHHTS---TTEEEESSSCSSSEEEEE
T ss_pred HHHHHH---HHHHhCCCcchhHHHH-HHHHHHHHHH--HHHhHHHHHHHHHHHHHHhhC---CCceeeccCCcceEEEEE
Confidence 887653 0111112333333433 3344555533 244555677788888888765 33332 23456666666
Q ss_pred EeecCCccchhHHHHHHHHHHHCCcEEeecC-------CEEEEeCCC---CCCHHHHHHHHHHHHHH
Q psy14484 368 VIIEDPEQIETFSKKFFVAALKNELLLRPIG-------NTVYLMPPY---ILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 368 ~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-------~~lR~~~~~---~~t~e~i~~~~~~l~~~ 424 (430)
+. ... ......+.+.|.++||.+.++. .++|+++.. ..+.+++++++++|.++
T Consensus 296 ~~-~~~---~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 296 FE-NSA---DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp ES-SCH---HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ec-Ccc---chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 65 321 1114678899999999998752 467886643 35899999999998875
No 178
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=4.7e-22 Score=189.63 Aligned_cols=312 Identities=8% Similarity=0.019 Sum_probs=203.7
Q ss_pred CCHHHHHHHHHHHhhccccccCCCC--CHHHHHHHHHHHhhcCC-CCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLT--HKPVIKLSEKLSSLTQY-KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK 127 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~-~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~ 127 (430)
-+|++.+++.+.+..........+. .+...++++.+++.++. +.+++++++||++|+..+++.+.. +
T Consensus 15 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~--------~-- 84 (362)
T 3ffr_A 15 LYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVE--------K-- 84 (362)
T ss_dssp CCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCS--------S--
T ss_pred CCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccC--------C--
Confidence 4789998888877653211111111 24567888899998865 356899999999999999997753 3
Q ss_pred EEEEEcCCCCCcchh-hhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEE
Q psy14484 128 KFICLQNSYHGETLG-ALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 206 (430)
Q Consensus 128 ~vl~~~~~yhg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 206 (430)
.+++....+++.... ... ....+...++.+..+.. |+++|+ + .+++++|+
T Consensus 85 ~~i~~~~~~~~~~~~~~~~------------~~g~~~~~v~~~~~~~~------------d~~~l~--~---~~~~~~v~ 135 (362)
T 3ffr_A 85 KSFHCVNGSFSKRFYEFAG------------ELGREAYKEEAAFGKGF------------YPADIT--V---PADAEIIC 135 (362)
T ss_dssp EEEEEECSHHHHHHHHHHH------------HTTCEEEEEECCTTCCC------------CGGGCC--C---CTTCCEEE
T ss_pred cEEEEcCcHHHHHHHHHHH------------HhCCCeEEEecCCCCCC------------CHHHHh--c---cCCccEEE
Confidence 555555544442211 111 11123344544433322 667776 2 45788888
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhc-CCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCccccEEE
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNY-NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLPLSLV 283 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~-gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ig~~ 283 (430)
+++ ++|++|.+.+ +++|.++|++| |+++|+|++|+ ++... ... .. .|+++ ++|.++++ ..+|++
T Consensus 136 ~~~-~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~-~~~~~--~~~--~~--~d~~~~s~~K~~~~~-~G~g~~ 202 (362)
T 3ffr_A 136 LTH-NETSSGVSMP----VEDINTFRDKNKDALIFVDAVSS-LPYPK--FDW--TK--IDSVFFSVQKCFGLP-AGLGVW 202 (362)
T ss_dssp EES-EETTTTEECC----HHHHTTSGGGSTTSEEEEECTTT-TTSSC--CCT--TS--CSEEEEETTSTTCCC-SCCEEE
T ss_pred EEc-CCCCcceeCC----HHHHHHHHHhCCCCEEEEecccc-cCCcc--cCh--hH--CcEEEEecccccCCC-CceEEE
Confidence 888 9999998877 99999999999 99999999987 32211 111 11 57765 45999854 357889
Q ss_pred EEcHHHHHhhhcc---CCccccc------------ccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHH
Q psy14484 284 MTTDKIYNSIYYK---NNINIFL------------HSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKAL 345 (430)
Q Consensus 284 ~~~~~~~~~~~~~---~~~~~~~------------~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l 345 (430)
++++++.+.+... +...+.. ....++.+..++.++.++++.+.. ++..++.+++.+++.+.|
T Consensus 203 ~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 282 (362)
T 3ffr_A 203 ILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYI 282 (362)
T ss_dssp EEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 9999887765530 0000000 011345566777777777775543 345566777777888887
Q ss_pred HchhcCCCeeeEe-----ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHH
Q psy14484 346 TSLITHPKIINFR-----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQ 415 (430)
Q Consensus 346 ~~l~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~ 415 (430)
+++ +++.... ..+.++++.+. . . +.++.+.|.++||.+.++ ++++|++++..+++++++
T Consensus 283 ~~~---~g~~~~~~~~~~~~~~~~~~~~~-~----~---~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~ 351 (362)
T 3ffr_A 283 ESS---KVFSFGVEDAKLRSMTTIVANTT-M----L---PGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVH 351 (362)
T ss_dssp HHC---SSEEESSSCGGGBCSSEEEEEES-S----C---HHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHH
T ss_pred HHc---cCceeccCChhhcCCceEEEecC-C----C---HHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHH
Confidence 755 3322111 23455666665 3 1 467999999999999874 478999999999999999
Q ss_pred HHHHHHHHHH
Q psy14484 416 HMTSAIFQTF 425 (430)
Q Consensus 416 ~~~~~l~~~l 425 (430)
+++++|++++
T Consensus 352 ~l~~~l~~~~ 361 (362)
T 3ffr_A 352 KLVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 179
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=1.6e-22 Score=194.01 Aligned_cols=313 Identities=15% Similarity=0.118 Sum_probs=197.4
Q ss_pred cCCCCCHHH----HHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhc
Q psy14484 47 LFGHSNSYI----NKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNK 121 (430)
Q Consensus 47 ~lG~~~p~v----~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~ 121 (430)
.+++++|.+ .+++.+.+.... .+..+...++++.+++.++ .+++++++||++|++.+++.+ ..
T Consensus 7 ~l~~~~~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~l~~~la~~~~--~~~~i~~~sgt~al~~~l~~l~~~----- 74 (373)
T 3frk_A 7 SFKPMHDEIEYEIKFKFEEIYKRNW-----FILGDEDKKFEQEFADYCN--VNYCIGCGNGLDALHLILKGYDIG----- 74 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTC-----CSSSHHHHHHHHHHHHHHT--SSEEEEESCHHHHHHHHHHHTTCC-----
T ss_pred CCCcccCCCCHHHHHHHHHHHHCCC-----ccCCchHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCC-----
Confidence 345555544 445544444321 3456788899999999994 459999999999999999977 32
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
+++.|++..++|++........+ .+..+++.+ +.+.. |+++|+++++ +
T Consensus 75 ---~gd~Vi~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------d~~~l~~~l~---~ 123 (373)
T 3frk_A 75 ---FGDEVIVPSNTFIATALAVSYTG-------------AKPIFVEPDIRTYNI------------DPSLIESAIT---E 123 (373)
T ss_dssp ---TTCEEEEETTSCTHHHHHHHHHS-------------CEEEEECEETTTTEE------------CGGGTGGGCC---T
T ss_pred ---CcCEEEECCCCcHHHHHHHHHcC-------------CEEEEEeccccccCc------------CHHHHHHhcC---C
Confidence 56789999999987643322211 122334332 21221 6788887775 4
Q ss_pred CeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee----cccCC-
Q psy14484 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS----KGITG- 275 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s----K~l~g- 275 (430)
++++|+ + . +++|...+ +++|.++|+++|+++|+||+|+ +|.. +.....+..+|++++| |.+++
T Consensus 124 ~~~~v~--~-~-n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~~d~~~~S~~~~K~l~~~ 191 (373)
T 3frk_A 124 KTKAII--A-V-HLYGQPAD----MDEIKRIAKKYNLKLIEDAAQA-HGSL---YKGMKVGSLGDAAGFSFYPAKNLGSL 191 (373)
T ss_dssp TEEEEE--E-E-CCTTCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECCTTSSSCCS
T ss_pred CCeEEE--E-E-CCCcCccc----HHHHHHHHHHcCCEEEEECCcc-cCCE---ECCEeccccccEEEEeCcCCCccCcc
Confidence 677777 3 3 45776666 9999999999999999999997 3221 2223344457888877 99987
Q ss_pred CccccEEEEEcH-HHHHhhhc---cCCccc---ccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch
Q psy14484 276 GYLPLSLVMTTD-KIYNSIYY---KNNINI---FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL 348 (430)
Q Consensus 276 G~~~ig~~~~~~-~~~~~~~~---~~~~~~---~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 348 (430)
| ..|+++.+. ++.+.+.. .+.... ...+.++..+++.++.+...++.+ ++..++.+++.+++.+.|+++
T Consensus 192 g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~ 267 (373)
T 3frk_A 192 G--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYL--DKWNEERRKIAQKYIAGINNP 267 (373)
T ss_dssp S--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHCCCT
T ss_pred c--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccC
Confidence 5 367777764 45544432 111000 111234444666555555444432 346677778888888887765
Q ss_pred h-cCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC----------------------------C
Q psy14484 349 I-THPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG----------------------------N 399 (430)
Q Consensus 349 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~----------------------------~ 399 (430)
. ..+.... .....++.+.+. .. . ...+.+.|.++||.+.+.. .
T Consensus 268 ~~~~~~~~~-~~~~~~~~~~~~-~~---~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (373)
T 3frk_A 268 NVIIPVEAD-YAKHVWYTFVIR-SE---K---RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANE 339 (373)
T ss_dssp TEECCCCCT-TEECCCSSEEEE-ES---S---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHH
T ss_pred ceEeccCCC-CCceeeEEEEEE-eC---C---HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhC
Confidence 2 1111100 011222222222 11 1 3679999999999887421 5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 400 TVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 400 ~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+|++++..+|++||++++++|+++..
T Consensus 340 ~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 340 ILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred EEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 799999999999999999999987643
No 180
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.89 E-value=2.5e-21 Score=186.66 Aligned_cols=316 Identities=13% Similarity=0.151 Sum_probs=201.9
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFI 130 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl 130 (430)
.|++++++.+++.... ...+..+...++++.+++.++. ++.++++||++|++.+++.+ .. +++.|+
T Consensus 16 ~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~la~~~~~--~~~i~~~sGt~al~~~l~~l~~~--------~gd~Vi 82 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ---WWRMGGDEVNSFEREFAAHHGA--AHALAVTNGTHALELALQVMGVG--------PGTEVI 82 (388)
T ss_dssp CHHHHHHHHHHHHTSC---CBTTTCSHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHTTCC--------TTCEEE
T ss_pred CHHHHHHHHHHHHcCC---eeecCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCC--------CcCEEE
Confidence 3899999999887632 1234456778999999999963 35555666799999999987 32 567899
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 209 (430)
+.+++||+........+ .....++.+.. +.. |+++|+++++ +++++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------------d~~~l~~~i~---~~~~~v~--~ 132 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRLG-------------AVTVPVDVDAATYNL------------DPEAVAAAVT---PRTKVIM--P 132 (388)
T ss_dssp EESSSCTHHHHHHHHTT-------------CEEEEECBCTTTCCB------------CHHHHHHHCC---TTEEEEC--C
T ss_pred ECCCccHHHHHHHHHcC-------------CEEEEEecCCCcCCC------------CHHHHHHhcC---cCceEEE--E
Confidence 99999998754332211 22334443321 222 7899999885 4677776 5
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc
Q psy14484 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT 286 (430)
Q Consensus 210 ~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~ 286 (430)
.+ ++|.+.+ +++|.++|++||+++|+||+|+ |....|.. +..++ ..++.+|| |.++|| ++|+++++
T Consensus 133 -~n-~tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~~S~s~~K~l~g~--~~G~~~~~ 201 (388)
T 1b9h_A 133 -VH-MAGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIATFSFQNGKLMTAG--EGGAVVFP 201 (388)
T ss_dssp -BC-GGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEEEECCTTSSSCSS--SCEEEEEC
T ss_pred -eC-CccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEEEEccCCCcccCC--CeEEEEEC
Confidence 44 4676766 9999999999999999999998 33222221 22222 23455666 677664 68999988
Q ss_pred HH-H--HHhhhc---cCCc---ccc---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 287 DK-I--YNSIYY---KNNI---NIF---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 287 ~~-~--~~~~~~---~~~~---~~~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
++ + .+.+.. .+.. ..+ ..+.++..+++.++++.+.++.++ +..++.+++.+++.+.|+++......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~~~~~~~~ 279 (388)
T 1b9h_A 202 DGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIAVRDERWTLLSRLLGAIDGVVPQ 279 (388)
T ss_dssp TTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTSTTCEEC
T ss_pred CHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCcccc
Confidence 75 5 454421 0000 001 012223346665555545554332 35666777788888888765222111
Q ss_pred ee----EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC--------------------------------
Q psy14484 355 IN----FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-------------------------------- 398 (430)
Q Consensus 355 ~~----~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~-------------------------------- 398 (430)
.. .+..+.++++.+. ... ......+.+.|.++||.+.++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (388)
T 1b9h_A 280 GGDVRADRNSHYMAMFRIP-GLT---EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAI 355 (388)
T ss_dssp CCCTTCCBCCCSEEEEECT-TCC---HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHH
T ss_pred CCCcCCCccceEEEEEEeC-CcC---cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHH
Confidence 10 0123567777665 311 0014679999999999987531
Q ss_pred --CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q psy14484 399 --NTVYLMPPYIL-NKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 --~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~ 427 (430)
..+|++++..+ |++||+.+++.|++++++
T Consensus 356 ~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 356 SSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 25899999999 999999999999998765
No 181
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.89 E-value=1.3e-21 Score=188.77 Aligned_cols=307 Identities=12% Similarity=0.051 Sum_probs=195.1
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCC
Q psy14484 46 NLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLN 125 (430)
Q Consensus 46 ~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~ 125 (430)
..+.+.+++..+++.+. .... .....+.++...++++.++++++. +++++++||++|+..+++.+.. +
T Consensus 30 ~~~~~~~~~~~~~~~~~-~~~~-~~y~~~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~ai~~~~~~~~~--------~ 97 (389)
T 3acz_A 30 STFCFDSTQQGADLFMG-KGEG-HIYSRLGNPTVEQFEEMVCSIEGA--AGSAAFGSGMGAISSSTLAFLQ--------K 97 (389)
T ss_dssp SBBCCSSHHHHHHHHTT-CSSC-CCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHTTTCC--------T
T ss_pred CceecCChHHHHHhhcC-CCCC-cccCCCCChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHhC--------C
Confidence 44566666544433221 1111 122356678889999999999953 4788888999999999987643 5
Q ss_pred CcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 126 KKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 126 ~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
+++|++.++.||+....... .......+..+++.. |+++++++++ +++++|
T Consensus 98 gd~vl~~~~~y~~~~~~~~~---------~~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~~~~v 148 (389)
T 3acz_A 98 GDHLIAGDTLYGCTVSLFTH---------WLPRFGIEVDLIDTS-----------------DVEKVKAAWK---PNTKMV 148 (389)
T ss_dssp TCEEEEESSCCHHHHHHHHH---------HHHHTTCEEEEECTT-----------------CHHHHHHTCC---TTEEEE
T ss_pred CCEEEEeCCCchHHHHHHHH---------HHHHcCCEEEEECCC-----------------CHHHHHHhcC---CCCeEE
Confidence 67899999999875332110 001112233444432 7888888885 578999
Q ss_pred EEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EE
Q psy14484 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SL 282 (430)
Q Consensus 206 i~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~ 282 (430)
++++ ++|++|.+.+ +++|.++|+++|+++|+||+|+++. .+.. .+..+|++ +++|.++++..++ |+
T Consensus 149 ~~~~-~~nptG~~~~----l~~i~~~~~~~~~~livD~~~~~~~-~~~~-----~~~~~di~~~S~sK~~~~~~~~~~G~ 217 (389)
T 3acz_A 149 YLES-PANPTCKVSD----IKGIAVVCHERGARLVVDATFTSPC-FLKP-----LELGADIALHSVSKYINGHGDVIGGV 217 (389)
T ss_dssp EEES-SCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCTT-TCCG-----GGTTCSEEEEETTTTTTCSSCCCCEE
T ss_pred EEEC-CCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcccc-ccCc-----cccCCeEEEECChhhccCCCCceeEE
Confidence 9999 9999998887 9999999999999999999998542 1222 12457877 6889998854687 99
Q ss_pred EEEcH-HHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-----------hc
Q psy14484 283 VMTTD-KIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-----------IT 350 (430)
Q Consensus 283 ~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-----------~~ 350 (430)
+++++ ++++.+.. .....+...++..+.++...|+.+. ...++..+..+.+.+.|++. ..
T Consensus 218 v~~~~~~~~~~l~~------~~~~~g~~~~~~~~~~~~~~l~~l~--~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~ 289 (389)
T 3acz_A 218 SSAKTAEDIATIKF------YRKDAGSLMAPMDAFLCARGMKTLP--IRMQIHMENGLKVAKFLEQHEKIVKVNHPGLES 289 (389)
T ss_dssp EEESSHHHHHHHHH------HHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTT
T ss_pred EEECcHHHHHHHHH------HHHhcCCCCCHHHHHHHHcCccHHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCC
Confidence 99998 88877654 1111222346776666666665331 22344445555565655442 11
Q ss_pred CCCee----eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee---c--------------------------
Q psy14484 351 HPKII----NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP---I-------------------------- 397 (430)
Q Consensus 351 ~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~---~-------------------------- 397 (430)
+|.+. ..++.|.++.+++. . .....+.+.+.|+.+.. +
T Consensus 290 ~~~~~~~~~~~~g~g~~~~~~l~-~--------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g 360 (389)
T 3acz_A 290 FPGHDIAKKQMTGYGSTFLFEMK-S--------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQG 360 (389)
T ss_dssp STTHHHHHHHCSSCCSEEEEEES-S--------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHT
T ss_pred CccHHHHHhhCCCCCeEEEEEEC-C--------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcC
Confidence 11111 11345788888876 3 13455556666776544 1
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 398 --GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 398 --~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+.+|++++...+++.++.+.++|
T Consensus 361 ~~~~~iRlsvg~~~~~~li~~l~~al 386 (389)
T 3acz_A 361 ITPELVRISVGIENVDDIIADLKQAL 386 (389)
T ss_dssp CCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCcCeEEEEeccCCHHHHHHHHHHHH
Confidence 368999988765444444444333
No 182
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.89 E-value=3e-22 Score=188.90 Aligned_cols=279 Identities=14% Similarity=0.047 Sum_probs=182.9
Q ss_pred HHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccC
Q psy14484 81 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLL 160 (430)
Q Consensus 81 ~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 160 (430)
++++.+++.++. ++.++++||++|+..+++.+.. +++.|++.+++||+......... ....
T Consensus 2 ~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~~~~~--------~g~~v~~~~~~~~~~~~~~~~~~---------~~~g 62 (331)
T 1pff_A 2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLK--------AGDHLISDDCLYGCTHALFEHQL---------RKFG 62 (331)
T ss_dssp HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC--------TTCEEEEESCCCHHHHHHHHTHH---------HHTT
T ss_pred hHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCCcchHHHHHHHHH---------HhcC
Confidence 577888888864 3666777789999999997643 56789999999987643321100 0011
Q ss_pred CCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHh-cCCEE
Q psy14484 161 NKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN-YNIHL 239 (430)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~-~gi~l 239 (430)
.+...++.. |++++++.++ +++++|++++ ++|++|.+.+ +++|.++|++ +|+++
T Consensus 63 ~~~~~~~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~nptG~~~~----~~~i~~~~~~~~~~~l 117 (331)
T 1pff_A 63 VEVDFIDMA-----------------VPGNIEKHLK---PNTRIVYFET-PANPTLKVID----IEDAVKQARKQKDILV 117 (331)
T ss_dssp CEEEEECTT-----------------STTHHHHTCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHHTTSSSCEE
T ss_pred CEEEEeCCC-----------------CHHHHHHhhc---CCCeEEEEEC-CCCCcCcccC----HHHHHHHHhhhcCCEE
Confidence 222344332 6678888775 5789999999 9999998887 9999999999 99999
Q ss_pred EEeccccCCCCcccccccccCCCCCceeeeecccCCCccc-cEEEEEcH-HHHHhhhccCCccccccc-CCCCCCHHHHH
Q psy14484 240 IADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLP-LSLVMTTD-KIYNSIYYKNNINIFLHS-HSYSGNPLACC 316 (430)
Q Consensus 240 i~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~-ig~~~~~~-~~~~~~~~~~~~~~~~~~-~t~~~~~~~~~ 316 (430)
|+||+|+.+ .... .. .++....+.+++|.++++..| +|++++++ ++.+.+.. .... .+...+++++.
T Consensus 118 i~D~a~~~~-~~~~--~~-~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~ 187 (331)
T 1pff_A 118 IVDNTFASP-ILTN--PL-DLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ------GIKDITGAIISPHDAW 187 (331)
T ss_dssp EEECTTTHH-HHCC--GG-GGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT------CCCCCCCCCCCHHHHH
T ss_pred EEECCCccc-ccCC--hh-hcCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHH------HHHhhcCCCCCHHHHH
Confidence 999999722 1111 11 223323334688999874367 78999998 88887765 2233 34566777777
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHch-----------hcCCCee----eEeecceEEEEEEeecCCccchhHHH
Q psy14484 317 AALATLEIFNKDNILQRISQDMKKITKALTSL-----------ITHPKII----NFRQKGMIWAFDVIIEDPEQIETFSK 381 (430)
Q Consensus 317 aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l-----------~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~a~ 381 (430)
++.++++.+. ...+...+..+.+.+.+++. ...+.+. ..++.+.++.+.+. + ..
T Consensus 188 ~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~ 256 (331)
T 1pff_A 188 LITRGTLTLD--MRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD-G--------LE 256 (331)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS-S--------HH
T ss_pred HHHcCcchHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C--------HH
Confidence 6666666432 12233333444444444321 1112111 11346778777665 2 24
Q ss_pred HHHHHHHHCCcEEeec-------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q psy14484 382 KFFVAALKNELLLRPI-------------------------------GNTVYLMPPYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 382 ~~~~~l~~~Gv~~~~~-------------------------------~~~lR~~~~~~~t~e~i~~~~~~l~~~ 424 (430)
.+.+.|.++||.+... .+.+|++++..+++++++.++++|+++
T Consensus 257 ~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 257 KAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 5777888889965321 378999999999999999999988754
No 183
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.89 E-value=8.9e-22 Score=190.88 Aligned_cols=293 Identities=12% Similarity=0.087 Sum_probs=189.1
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+..+...+++++++++.+ .+++++++||++|+..+++.++. +++.||+.++.|++.......
T Consensus 76 ~r~~~p~~~~l~~~la~~~g--~~~~~~~~sG~~Ai~~al~~l~~--------~Gd~Vi~~~~~y~~~~~~~~~------ 139 (414)
T 3ndn_A 76 SRYGNPTVSVFEERLRLIEG--APAAFATASGMAAVFTSLGALLG--------AGDRLVAARSLFGSCFVVCSE------ 139 (414)
T ss_dssp TTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHTTCC--------TTCEEEEESCCCHHHHHHHHT------
T ss_pred CCCCChHHHHHHHHHHHHHC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEcCCccchHHHHHHH------
Confidence 35678899999999999984 57899999999999999987754 568899999999985332211
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.+.....+..+++.. |+++|+++++ +++++|++++ ++|++|.+.+ +++|.++
T Consensus 140 ---~~~~~g~~~~~v~~~-----------------d~~~l~~ai~---~~t~~v~le~-p~NptG~~~~----l~~i~~l 191 (414)
T 3ndn_A 140 ---ILPRWGVQTVFVDGD-----------------DLSQWERALS---VPTQAVFFET-PSNPMQSLVD----IAAVTEL 191 (414)
T ss_dssp ---HHHHTTCEEEEECTT-----------------CHHHHHHHTS---SCCSEEEEES-SCTTTCCCCC----HHHHHHH
T ss_pred ---HHHHcCcEEEEeCCC-----------------CHHHHHHhcC---CCCeEEEEEC-CCCCCCcccc----HHHHHHH
Confidence 011122344455543 7899999885 4688999999 9999998876 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCC-CccccEEEEEcHHHHH-hhhccCCcccccccCCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITG-GYLPLSLVMTTDKIYN-SIYYKNNINIFLHSHSYS 309 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~g-G~~~ig~~~~~~~~~~-~~~~~~~~~~~~~~~t~~ 309 (430)
|+++|+++|+||+|+ ++..+.....+....+.+++|.+++ |.+++|+++++++.+. .+.. . ...++. .
T Consensus 192 a~~~g~~livDe~~~----~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~---~-~~~~g~--~ 261 (414)
T 3ndn_A 192 AHAAGAKVVLDNVFA----TPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---L-MRHTGP--A 261 (414)
T ss_dssp HHHTTCEEEEECTTT----HHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHH---H-HHHHCC--C
T ss_pred HHHcCCEEEEECCCc----ccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHH---H-HHHcCC--C
Confidence 999999999999986 2211111233444445568899988 4368999999987765 4432 0 001222 2
Q ss_pred CCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCe----------eeEeecceEEEEEEeecCCc
Q psy14484 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKI----------INFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 310 ~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~----------~~~~~~g~~~~~~~~~~~~~ 374 (430)
.++..+..+...++.+. ...++..++.+++.+.|++... +|.+ ...++.|.++++++. .+..
T Consensus 262 ~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~-~~~~ 338 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLA--IRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALD-CPED 338 (414)
T ss_dssp CCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEEC-SCGG
T ss_pred CCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEc-CCcc
Confidence 35665555544444332 2345556666777777764311 1111 112457899999997 4200
Q ss_pred cchhHHHHHHHHHHHCCcEEee----------------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLRP----------------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~----------------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
.....+.+|.+.|...++.+.. .++.+|+++.. |+++.+++.|+++|
T Consensus 339 ~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al 413 (414)
T 3ndn_A 339 VAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL 413 (414)
T ss_dssp GHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 0011246777777655433321 13689998775 44566666666654
No 184
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.89 E-value=2e-20 Score=182.56 Aligned_cols=315 Identities=11% Similarity=0.097 Sum_probs=201.4
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccccCCCC-CHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCC
Q psy14484 45 VNLFGHSNSYINKALKNQLNKLEHVMLSNLT-HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGF 123 (430)
Q Consensus 45 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~ 123 (430)
...++ .+|++.+++.+.+.... +.. .+...++++.+++.++ .+++++++||++|++.+++++.
T Consensus 25 ~p~~~-~p~~~~~a~~~~~~~~~-----y~~~~~~~~~l~~~la~~~~--~~~v~~~~ggt~al~~~l~~l~-------- 88 (424)
T 2po3_A 25 RPNRI-DRARLYERLDRALDSQW-----LSNGGPLVREFEERVAGLAG--VRHAVATCNATAGLQLLAHAAG-------- 88 (424)
T ss_dssp CCCCC-CHHHHHHHHHHHHHHTC-----CSSSCHHHHHHHHHHHHHHT--SSEEEEESCHHHHHHHHHHHHT--------
T ss_pred CCCCC-ChHHHHHHHHHHHhcCC-----cccCCHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcC--------
Confidence 34455 35789999988876521 122 4777899999999994 4799999999999999999873
Q ss_pred CCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 124 ~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
.++.|++.+++|+++....... + .....++.+. .+.. |+++|++.++ +++
T Consensus 89 -~gd~Vlv~~~~~~~~~~~~~~~-G------------~~~~~v~~~~~~~~~------------d~~~l~~~i~---~~~ 139 (424)
T 2po3_A 89 -LTGEVIMPSMTFAATPHALRWI-G------------LTPVFADIDPDTGNL------------DPDQVAAAVT---PRT 139 (424)
T ss_dssp -CCSEEEEESSSCTHHHHHHHHT-T------------CEEEEECBCTTTSSB------------CHHHHGGGCC---TTE
T ss_pred -CCCEEEECCCccHHHHHHHHHc-C------------CEEEEEecCCCcCCc------------CHHHHHHhhC---cCC
Confidence 2478999999999875432221 1 1223444332 1222 7888888775 467
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee----cccCCCc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS----KGITGGY 277 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~ 277 (430)
++|++.+ ++|...+ +++|.++|+++|+++|+||+|+ |+.+.+.. .+..+|++++| |.+++
T Consensus 140 ~~v~~~~----~tG~~~~----l~~i~~la~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~-- 204 (424)
T 2po3_A 140 SAVVGVH----LWGRPCA----ADQLRKVADEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNA-- 204 (424)
T ss_dssp EEEEEEC----GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCC--
T ss_pred cEEEEEC----CCCCcCC----HHHHHHHHHHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccC--
Confidence 7777643 3565544 9999999999999999999998 66544422 12225666554 77876
Q ss_pred cccEEEEEc-HHHHHhhhcc---CCcccc---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc
Q psy14484 278 LPLSLVMTT-DKIYNSIYYK---NNINIF---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT 350 (430)
Q Consensus 278 ~~ig~~~~~-~~~~~~~~~~---~~~~~~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 350 (430)
.++|+++++ +++++.+... +..... ..+.++..+++.++++...++.+ +.+.++.+++.+++.+.|+++
T Consensus 205 ~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~--~~~~~~~~~~~~~l~~~L~~~-- 280 (424)
T 2po3_A 205 FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAF--PEVIDRNRRNHAAYREHLADL-- 280 (424)
T ss_dssp SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTCSC--
T ss_pred CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccC--
Confidence 489999998 7877665430 000000 01112233455555555444433 235666677777777777654
Q ss_pred CCCeeeEe-ecc-----eEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-C-------------------------
Q psy14484 351 HPKIINFR-QKG-----MIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-G------------------------- 398 (430)
Q Consensus 351 ~~~~~~~~-~~g-----~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-~------------------------- 398 (430)
+.+.... ..| .++.+.+. +...... ..++.+.|.++||.+.+. .
T Consensus 281 -~g~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~ 356 (424)
T 2po3_A 281 -PGVLVADHDRHGLNNHQYVIVEID-EATTGIH--RDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAA 356 (424)
T ss_dssp -TTEEECCGGGGSCCCCCCEEEEEC-HHHHSSC--HHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHT
T ss_pred -CCccccCCCCCCccccEEEEEEEC-Cccchhh--HHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhc
Confidence 3332221 222 33445444 2000001 357888999999998762 1
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 399 NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 399 ~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
..+|+.++..++++++++++++|++++.+
T Consensus 357 ~~l~l~~~~~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 357 RVLSLPTGTAIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp TEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 12777777999999999999999998764
No 185
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.88 E-value=4.4e-21 Score=183.63 Aligned_cols=305 Identities=15% Similarity=0.136 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q psy14484 53 SYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132 (430)
Q Consensus 53 p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~ 132 (430)
|++.+++.+.+... .....+...++++.+++.++ .+++++++||++|++.|++.+.. .+++.|++.
T Consensus 16 ~~v~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~~--~~~~~~~~sGt~al~~al~~~~~-------~~gd~Vi~~ 81 (367)
T 3nyt_A 16 DKIDAGIQRVLRHG-----QYILGPEVTELEDRLADFVG--AKYCISCANGTDALQIVQMALGV-------GPGDEVITP 81 (367)
T ss_dssp HHHHHHHHHHHHHC-----CCSSCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHTTC-------CTTCEEEEE
T ss_pred HHHHHHHHHHHhcC-----CccCChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhCC-------CCcCEEEEC
Confidence 34555555554432 13456778899999999995 45899999999999999998732 156789999
Q ss_pred cCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcccc
Q psy14484 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211 (430)
Q Consensus 133 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v 211 (430)
.++|++........+ ....+++.+.. +.. |+++|+++++ +++++|+.+
T Consensus 82 ~~~~~~~~~~~~~~G-------------~~~~~~~~~~~~~~~------------d~~~l~~~i~---~~~~~v~~~--- 130 (367)
T 3nyt_A 82 GFTYVATAETVALLG-------------AKPVYVDIDPRTYNL------------DPQLLEAAIT---PRTKAIIPV--- 130 (367)
T ss_dssp SSSCTHHHHHHHHTT-------------CEEEEECBCTTTCSB------------CGGGTGGGCC---TTEEEECCB---
T ss_pred CCccHHHHHHHHHcC-------------CEEEEEecCCccCCc------------CHHHHHHhcC---cCCcEEEee---
Confidence 999987654433322 22234444322 222 6788888774 578888733
Q ss_pred ccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee----cccCC-CccccEEEEE
Q psy14484 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS----KGITG-GYLPLSLVMT 285 (430)
Q Consensus 212 ~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s----K~l~g-G~~~ig~~~~ 285 (430)
+++|...+ +++|.++|+++|+++|+||+|+ |....+. ..+...|++++| |.+++ | . .|+++.
T Consensus 131 -~~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~l~~~g-~-gg~~~~ 198 (367)
T 3nyt_A 131 -SLYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAPLGCYG-D-GGAIFT 198 (367)
T ss_dssp -CGGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSSSCCSS-C-CEEEEE
T ss_pred -CCccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCcCCCcC-c-eeEEEe
Confidence 34565555 9999999999999999999997 3322222 122223888877 99988 6 3 777877
Q ss_pred c-HHHHHhhhc---cCCcccc---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchh-cCCCeeeE
Q psy14484 286 T-DKIYNSIYY---KNNINIF---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-THPKIINF 357 (430)
Q Consensus 286 ~-~~~~~~~~~---~~~~~~~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~~ 357 (430)
+ +++.+.+.. .+....+ ..+.++..+++.++++.+.++.+ +++.++.+++.+++++.|+++. ..+....
T Consensus 199 ~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~- 275 (367)
T 3nyt_A 199 NDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIF--EEEIALRQKVAAEYDLSLKQVGIGTPFIEV- 275 (367)
T ss_dssp SCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHTTCCCCCCCT-
T ss_pred CCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCeeccCCCC-
Confidence 4 667655543 0100000 11346677888888777777644 3466777888889999888762 1121111
Q ss_pred eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------------------------CCEEEEeCCCCCCHH
Q psy14484 358 RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------------------------GNTVYLMPPYILNKN 412 (430)
Q Consensus 358 ~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------------------------~~~lR~~~~~~~t~e 412 (430)
.....+..+.+. .. . ...+.+.|.++||.+.+. ...+|+.++...|++
T Consensus 276 ~~~~~~~~~~~~-~~---~---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~ 348 (367)
T 3nyt_A 276 NNISVYAQYTVR-MD---N---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTA 348 (367)
T ss_dssp TEECCCSSEEEE-CS---S---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHH
T ss_pred CCceeeEEEEEE-eC---C---HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHH
Confidence 011112112222 11 1 367899999999977631 137899999999999
Q ss_pred HHHHHHHHHHHH
Q psy14484 413 EIQHMTSAIFQT 424 (430)
Q Consensus 413 ~i~~~~~~l~~~ 424 (430)
|++.+++.|++.
T Consensus 349 ~i~~v~~~~~~~ 360 (367)
T 3nyt_A 349 SIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 186
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.88 E-value=5e-22 Score=193.50 Aligned_cols=322 Identities=11% Similarity=0.110 Sum_probs=186.5
Q ss_pred CCHHHHHHHHHHHhh-cc--cccc----CCCCCHHHHH-HHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcC
Q psy14484 51 SNSYINKALKNQLNK-LE--HVML----SNLTHKPVIK-LSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 122 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~--~~~~----~~~~~~~~~~-l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g 122 (430)
.+|+|++++.+++.+ .. +... .....+..++ .++++++.++.+.+.++ +++|++|++.+++.+..
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~-~~sGs~a~~~a~~~~~~------ 114 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQ-PHSGSQANFAVYTALLQ------ 114 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECC-CSSHHHHHHHHHHHHCC------
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeE-ecCcHHHHHHHHHHhcC------
Confidence 699999999988743 21 1110 0111233333 44788888875544444 56779999999988754
Q ss_pred CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 123 ~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
+++.|++.++.|+++......... .... ......+.+..... |+++|++++++. ++
T Consensus 115 --~gd~v~~~~~~~~~~~~~~~~~~~---~g~~-----~~~~~~~~~~~~~~------------d~~~l~~~i~~~--~~ 170 (420)
T 3gbx_A 115 --PGDTVLGMNLAQGGHLTHGSPVNF---SGKL-----YNIVPYGIDESGKI------------DYDEMAKLAKEH--KP 170 (420)
T ss_dssp --TTCEEEEEEEC------------C---HHHH-----SEEEEEEECTTCSC------------CHHHHHHHHHHH--CC
T ss_pred --CCCEEEecchhhcceeccchhhhh---cccc-----eeEEeccCCccCCc------------CHHHHHHHHHhc--CC
Confidence 667888888877653211111000 0000 01111222221212 889999999752 46
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceee--eecccCCCccc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLC--LSKGITGGYLP 279 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~~~ 279 (430)
++|++++ .++ |...+ +++|.++|++||+++|+||+|. |+.+.+.... ... .+|+++ +||+++| .+
T Consensus 171 ~~v~~~~-~~~--~~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~--~~~-~~di~~~s~sK~~~g--~~ 238 (420)
T 3gbx_A 171 KMIIGGF-SAY--SGVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPN--PVP-HAHVVTTTTHKTLAG--PR 238 (420)
T ss_dssp SEEEECC-TTC--CSCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCC--STT-TSSEEEEESSGGGCS--CS
T ss_pred eEEEEec-Ccc--CCccC----HHHHHHHHHHcCCEEEEECCcchhceecccCCc--ccc-cCCEEEeecccCCCC--CC
Confidence 6777744 333 33444 9999999999999999999975 4433332111 111 378886 6699974 35
Q ss_pred cEEEEEcH---HHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCC
Q psy14484 280 LSLVMTTD---KIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHP 352 (430)
Q Consensus 280 ig~~~~~~---~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~ 352 (430)
.|++++++ ++.+.+.. ..+.++++. +...++++..++..... ++..++++++.+++.+.|++. ...
T Consensus 239 gg~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 311 (420)
T 3gbx_A 239 GGLILAKGGDEELYKKLNS------AVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYK 311 (420)
T ss_dssp CEEEEESSCCHHHHHHHHH------HHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred ceEEEEcCCcHHHHHHhhh------hcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCe
Confidence 68889887 77666654 122222322 33333333334432211 345677788888888888763 211
Q ss_pred CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee-------c----CCEEEEeCCCC----CCHHHHHHH
Q psy14484 353 KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP-------I----GNTVYLMPPYI----LNKNEIQHM 417 (430)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~-------~----~~~lR~~~~~~----~t~e~i~~~ 417 (430)
.+ .....+.++++.+. .... . ...+.+.|.++||.+.+ + ...+||+++.. .++++++++
T Consensus 312 ~~-~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~ 385 (420)
T 3gbx_A 312 VV-SGGTENHLFLLDLV-DKNL-T---GKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKEL 385 (420)
T ss_dssp EG-GGSCSSSEEEEECG-GGTC-C---HHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred ec-cCCCCCeEEEEEcC-CCCC-C---HHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHH
Confidence 11 11134666676665 3111 1 35678888889999887 2 24699998765 458999999
Q ss_pred HHHHHHHHHHh
Q psy14484 418 TSAIFQTFNEV 428 (430)
Q Consensus 418 ~~~l~~~l~~~ 428 (430)
+++|++++.+.
T Consensus 386 ~~~l~~~l~~~ 396 (420)
T 3gbx_A 386 AGWMCDVLDNI 396 (420)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhCc
Confidence 99999988653
No 187
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=3.6e-21 Score=187.73 Aligned_cols=330 Identities=14% Similarity=0.112 Sum_probs=190.1
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhh-cccccc--CCC----CCHHHHHHH-HHHHhhcCCCCCeE-EEcCCchHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNK-LEHVML--SNL----THKPVIKLS-EKLSSLTQYKLGHC-FYGSDGASA 106 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~~~~--~~~----~~~~~~~l~-~~l~~~~~~~~~~v-~~~~sgteA 106 (430)
.+++.++ .+ +.+|+|++++.+++.. +..... ..+ ..+..++++ +.+++.++ .+.+ ++++||++|
T Consensus 34 ~i~l~~~--~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~v~~~~Gs~a 106 (425)
T 3ecd_A 34 QVELIAS--EN---IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGHANVQPHSGAQA 106 (425)
T ss_dssp SEECCTT--CC---CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSEEECCCSSHHHH
T ss_pred ceeeecc--cC---CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCCceeecCchHHH
Confidence 4666554 22 2389999999988742 211100 001 112445555 67778874 4444 459999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcc-hhhhc-cCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHH
Q psy14484 107 VEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET-LGALA-VTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEI 183 (430)
Q Consensus 107 ~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 183 (430)
++.+++++.. +++.|++.+++|++.. ..... ..+. ......++.+ +.+..
T Consensus 107 ~~~al~~~~~--------~gd~Vi~~~~~~~~~~~~~~~~~~~g~----------~~~~~~~~~~~~~~~~--------- 159 (425)
T 3ecd_A 107 NGAVMLALAK--------PGDTVLGMSLDAGGHLTHGAKPALSGK----------WFNALQYGVSRDTMLI--------- 159 (425)
T ss_dssp HHHHHHHHCC--------TTCEEEEECC----------------------------CEEEEECCCTTTSSC---------
T ss_pred HHHHHHHccC--------CCCEEEEcccccccceecchhhhhccc----------ceeeeecCCCcccCcc---------
Confidence 9999998743 6788999999998732 22111 1110 0011223322 11222
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCC
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEI 262 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~ 262 (430)
|+++|++++++. ++++|++++ .++ |...+ +++|.++|++||+++|+||+|. |+.+.+..... ..
T Consensus 160 ---d~~~l~~~i~~~--~~~~v~~~~-~~~--~~~~~----l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~--~~- 224 (425)
T 3ecd_A 160 ---DYDQVEALAQQH--KPSLIIAGF-SAY--PRKLD----FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP--VE- 224 (425)
T ss_dssp ---CHHHHHHHHHHH--CCSEEEEEC-SCC--CSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG--GG-
T ss_pred ---CHHHHHHHHhhc--CCcEEEEcc-ccC--CCcCC----HHHHHHHHHHcCCEEEEECcChHhhhhcccccCc--hh-
Confidence 889999999742 456677764 322 32333 8999999999999999999964 44333322111 11
Q ss_pred CCcee--eeecccCCCccccEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-h--cCHHHHHHH
Q psy14484 263 WPDFL--CLSKGITGGYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN-K--DNILQRISQ 336 (430)
Q Consensus 263 ~~d~~--~~sK~l~gG~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~-~--~~~~~~~~~ 336 (430)
.+|++ ++||+++| .++|+++++ +.+.+.+.. ....+.+.+.++...+++..++.... . +++.+++++
T Consensus 225 ~~di~~~s~sK~l~g--~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~ 297 (425)
T 3ecd_A 225 HAHVVTSTTHKTLRG--PRGGFVLTNDEEIAKKINS-----AVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLA 297 (425)
T ss_dssp TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHH-----HHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred cCcEEEecCCcccCC--CCcEEEEeCCHHHHHHHHh-----hhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 15666 56699955 478999998 566665543 01111122334444444444443322 2 356677888
Q ss_pred HHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe----ec-------CCEEEEeC
Q psy14484 337 DMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI-------GNTVYLMP 405 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~-------~~~lR~~~ 405 (430)
+.+++.+.|++. ..... ...+.+.++++.+. .... . ...+.+.|.++||.+. |+ .+.+|+++
T Consensus 298 ~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~ 370 (425)
T 3ecd_A 298 NAQALGDVLKAG-GVDLV-TGGTDNHLLLVDLR-PKGL-K---GAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGT 370 (425)
T ss_dssp HHHHHHHHHHHT-TCEEG-GGSCSSSEEEEECG-GGTC-C---HHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEES
T ss_pred HHHHHHHHHHhC-CCeec-cCCCCceEEEEEeC-CCCC-C---HHHHHHHHHHcCCEecccccCCCCCCCCCccceeccc
Confidence 888888888764 21111 11135667777665 3111 1 3568888889999998 32 14799986
Q ss_pred CCCC----CHHHHHHHHHHHHHHHHHh
Q psy14484 406 PYIL----NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 406 ~~~~----t~e~i~~~~~~l~~~l~~~ 428 (430)
+... +++++++++++|++++++.
T Consensus 371 ~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 371 PAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 5544 4999999999999998764
No 188
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=2.7e-20 Score=179.88 Aligned_cols=318 Identities=12% Similarity=0.137 Sum_probs=201.3
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKKFI 130 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~vl 130 (430)
+|++.+++.+.+... + . ....+...++++.+++.++ .+++++++||++|++.+++++ .. +++.|+
T Consensus 11 ~~~v~~a~~~~~~~~-~-~--~~~g~~~~~l~~~la~~~~--~~~v~~~~ggt~al~~~~~~l~~~--------~gd~Vl 76 (394)
T 1o69_A 11 GGNELKYIEEVFKSN-Y-I--APLGEFVNRFEQSVKDYSK--SENALALNSATAALHLALRVAGVK--------QDDIVL 76 (394)
T ss_dssp -CCHHHHHHHHHHHT-T-T--SCTTHHHHHHHHHHHHHHC--CSEEEEESCHHHHHHHHHHHTTCC--------TTCEEE
T ss_pred CHHHHHHHHHHHHcC-C-c--cCCChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHcCCC--------CCCEEE
Confidence 467888888887652 1 1 1112567899999999984 489999999999999999987 32 567899
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPL 210 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (430)
+.+++|+++.......+ .....++.+..+.. |+++|++++++.++++++|++++
T Consensus 77 ~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~------------d~~~l~~~i~~~~~~~~~v~~~~- 130 (394)
T 1o69_A 77 ASSFTFIASVAPICYLK-------------AKPVFIDCDETYNI------------DVDLLKLAIKECEKKPKALILTH- 130 (394)
T ss_dssp EESSSCGGGTHHHHHTT-------------CEEEEECBCTTSSB------------CHHHHHHHHHHCSSCCCEEEEEC-
T ss_pred ECCCccHHHHHHHHHcC-------------CEEEEEEeCCCCCc------------CHHHHHHHHhcccCCceEEEEEC-
Confidence 99999998754433311 22234444322222 78999999975322577777765
Q ss_pred cccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEc-
Q psy14484 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTT- 286 (430)
Q Consensus 211 v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~- 286 (430)
+ +|...+ +++|.++|+++|+++|+||+|+ |+...+.... .++ .+|+.+|| |.+++ .++|+++++
T Consensus 131 ~---~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~~~~s~s~~K~l~~--~~~G~~~~~~ 198 (394)
T 1o69_A 131 L---YGNAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKALG--TFG-EFGVYSYNGNKIITT--SGGGMLIGKN 198 (394)
T ss_dssp G---GGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSS-SEEEEECCTTSSSCC--SSCEEEEESC
T ss_pred C---CCChhh----HHHHHHHHHHcCCEEEEECcCcccceeCCcccc--ccc-CcEEEEEeCCccCCC--CCceEEEECC
Confidence 3 454544 9999999999999999999998 6544332111 111 36788885 66765 479999995
Q ss_pred HHHHHhhhccCCcc-----cc---cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEe
Q psy14484 287 DKIYNSIYYKNNIN-----IF---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFR 358 (430)
Q Consensus 287 ~~~~~~~~~~~~~~-----~~---~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 358 (430)
+++++.+....... .+ ..+.++..+++.++.+...++.++ +..++.+++.+++.+.|+++ ........
T Consensus 199 ~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~~--~~~~~~~~ 274 (394)
T 1o69_A 199 KEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKKREIYEWYKEFLGEY--FSFLDELE 274 (394)
T ss_dssp HHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTT--EECCCCCT
T ss_pred HHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccc--ccccCCCC
Confidence 78777665310000 00 001111235555555555455443 35677888888888888764 11111110
Q ss_pred -ecce--EEEEEEeecCC--------------c--cchhHHHHHHHHHHHCCcEEeecC---------------------
Q psy14484 359 -QKGM--IWAFDVIIEDP--------------E--QIETFSKKFFVAALKNELLLRPIG--------------------- 398 (430)
Q Consensus 359 -~~g~--~~~~~~~~~~~--------------~--~~~~~a~~~~~~l~~~Gv~~~~~~--------------------- 398 (430)
..+. ++.+.+. .+. . ........+.+.|.++||.++++.
T Consensus 275 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~ 353 (394)
T 1o69_A 275 NSRSNRWLSTALIN-FDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSE 353 (394)
T ss_dssp TEECCCSSEEEEES-CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHH
T ss_pred CCcceeEEEEEEec-chhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHH
Confidence 0122 3445544 210 0 000014679999999999887641
Q ss_pred ----CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 399 ----NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 399 ----~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
..+++..+..+|++|+++++++|++++.
T Consensus 354 ~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 354 LFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2455556777999999999999998764
No 189
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=4.7e-21 Score=186.50 Aligned_cols=322 Identities=11% Similarity=0.080 Sum_probs=189.7
Q ss_pred CCHHHHHHHHHHHhh-ccccc---cCCCCC----HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcC
Q psy14484 51 SNSYINKALKNQLNK-LEHVM---LSNLTH----KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 122 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~~~~---~~~~~~----~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g 122 (430)
.+|+|++++.+++.. +...+ ...... +....+++.+++.++.+.+++++ ++|++|++.+++++..
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~-~sGt~a~~~~~~~~~~------ 109 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQP-NSGSQANQGVYAALIN------ 109 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCC-SSHHHHHHHHHHHHSC------
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEe-ccHHHHHHHHHHHhcC------
Confidence 489999999988743 21111 111112 23334556888888765555655 5569999999998854
Q ss_pred CCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe
Q psy14484 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI 202 (430)
Q Consensus 123 ~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 202 (430)
+++.|++.+++|+++......... .........++.+..+.. |+++|++++++ .++
T Consensus 110 --~gd~vl~~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~------------d~~~l~~~i~~--~~~ 165 (417)
T 3n0l_A 110 --PGDKILGMDLSHGGHLTHGAKVSS--------SGKMYESCFYGVELDGRI------------DYEKVREIAKK--EKP 165 (417)
T ss_dssp --TTCEEEEECC------------------------CCSEEEEECCCTTSSC------------CHHHHHHHHHH--HCC
T ss_pred --CCCEEEecccccccccchhhhhhh--------hcceeeeEeccCCCCCCc------------CHHHHHHHHHh--cCC
Confidence 678899999999875321111000 000011122333322222 88999999974 245
Q ss_pred EEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCCccc
Q psy14484 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLP 279 (430)
Q Consensus 203 ~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ 279 (430)
++|++.+ .+ .|...+ +++|.++|++||+++|+||+|. |+...+... .. .. ..|++++| |+++| .+
T Consensus 166 ~~v~~~~-~~--~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~-~~-~~di~~~s~sK~l~g--~~ 233 (417)
T 3n0l_A 166 KLIVCGA-SA--YARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHP-SP-FP-YAHVVSSTTHKTLRG--PR 233 (417)
T ss_dssp SEEEECC-SS--CCSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CC-TT-TCSEEEEESSTTTCS--CS
T ss_pred eEEEECC-cc--cCccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCC-Cc-cc-cceEEEeeCccccCC--CC
Confidence 6666654 33 376666 9999999999999999999974 322112110 00 01 35777655 99955 47
Q ss_pred cEEEEEc-HHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCee
Q psy14484 280 LSLVMTT-DKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKII 355 (430)
Q Consensus 280 ig~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 355 (430)
+|+++++ +++.+.+... ..++.+.+.++..+++..+++..... +++.++++++.+++.+.|++. ......
T Consensus 234 ~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 307 (417)
T 3n0l_A 234 GGIIMTNDEELAKKINSA-----IFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVS 307 (417)
T ss_dssp CEEEEESCHHHHHHHHHH-----HTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG
T ss_pred eeEEEECCHHHHHHHhhh-----hCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-Cceecc
Confidence 8999998 7887776540 11222333455555555555554321 355667777778888888763 221111
Q ss_pred eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----------CCEEEEeCCCC----CCHHHHHHHHHH
Q psy14484 356 NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----------GNTVYLMPPYI----LNKNEIQHMTSA 420 (430)
Q Consensus 356 ~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----------~~~lR~~~~~~----~t~e~i~~~~~~ 420 (430)
....+.++++.+. .... . ...+.+.|.++||.+.+. ...+|+.++.. ++++++++++++
T Consensus 308 -~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 308 -DGTDNHLVLMSFL-DREF-S---GKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp -GSCSSSEEEEECT-TSSS-C---HHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred -CCCCceEEEEEcc-cCCC-C---HHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 1123445566654 3211 1 356788888999998742 25689876543 579999999999
Q ss_pred HHHHHHH
Q psy14484 421 IFQTFNE 427 (430)
Q Consensus 421 l~~~l~~ 427 (430)
|++++.+
T Consensus 382 l~~~l~~ 388 (417)
T 3n0l_A 382 IADILDD 388 (417)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999864
No 190
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.88 E-value=6.2e-21 Score=187.41 Aligned_cols=321 Identities=12% Similarity=0.084 Sum_probs=192.1
Q ss_pred CCHHHHHHHHHHHhh-cccccc---CCCCCH---HHHHHH-HHHHhhcCCCCCeEEE-cCCchHHHHHHHHHHHHhhhhc
Q psy14484 51 SNSYINKALKNQLNK-LEHVML---SNLTHK---PVIKLS-EKLSSLTQYKLGHCFY-GSDGASAVEVALKMSFHYWYNK 121 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~~~~~---~~~~~~---~~~~l~-~~l~~~~~~~~~~v~~-~~sgteA~~~al~~~~~~~~~~ 121 (430)
.+|+|++++.+++.+ +...+. ...... ..++++ +++++.++ .+.+.+ ++||++|++.++++++.
T Consensus 57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~~~~v~~~sGs~a~~~a~~~~~~----- 129 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AEFANVQPHSGAQANAAVLHALMS----- 129 (447)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSHHHHHHHHHHHHCC-----
T ss_pred CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CCceEEEeCCHHHHHHHHHHHhcC-----
Confidence 489999999987753 221111 011122 335566 88988885 445555 89999999999998764
Q ss_pred CCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCC
Q psy14484 122 GFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHN 200 (430)
Q Consensus 122 g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 200 (430)
+++.|++.+++|+++........ .. .........+.+ ..+.. |+++|++++++.
T Consensus 130 ---~Gd~Vl~~~~~~~~~~~~~~~~~----~~----g~~~~~~~~~~~~~~~~~------------d~~~l~~~i~~~-- 184 (447)
T 3h7f_A 130 ---PGERLLGLDLANGGHLTHGMRLN----FS----GKLYENGFYGVDPATHLI------------DMDAVRATALEF-- 184 (447)
T ss_dssp ---TTCEEEEECGGGTCCGGGTCTTS----HH----HHSSEEEEECCCTTTCSC------------CHHHHHHHHHHH--
T ss_pred ---CCCEEEecCcccccccchhhhhh----hc----CCeeEEEEcCcCcccCCc------------CHHHHHHHHHhc--
Confidence 56789999999887422111100 00 000111222222 11122 889999998643
Q ss_pred CeEEEEE-ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCcee--eeecccCCC
Q psy14484 201 KIAAIII-EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFL--CLSKGITGG 276 (430)
Q Consensus 201 ~~~~vi~-ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG 276 (430)
+++++++ .| .+++++ ++++|.++|++||+++|+||+|. |+...|..... .. ..|++ ++||+++|
T Consensus 185 ~~~~i~~~~~-~~~~~~-------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~--~~-~~di~~~s~sK~l~G- 252 (447)
T 3h7f_A 185 RPKVIIAGWS-AYPRVL-------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP--VP-HADVVSTTVHKTLGG- 252 (447)
T ss_dssp CCSEEEEECS-SCCSCC-------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS--TT-TCSEEEEESSGGGCC-
T ss_pred CCeEEEEcCC-CCCCcc-------CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC--CC-CCcEEEecCCcCCCC-
Confidence 3445655 45 443322 39999999999999999999974 44333321111 11 24665 57899964
Q ss_pred ccccEEEEEcHHHHHhhhccCCcccccccCCCCC-CHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHch-hcC
Q psy14484 277 YLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSG-NPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSL-ITH 351 (430)
Q Consensus 277 ~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l-~~~ 351 (430)
++.|++++++++.+.+.. .....++++ +...++++.+++..+.. ++..+++.++.+++.+.|++. ...
T Consensus 253 -~~gG~i~~~~~~~~~l~~------~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (447)
T 3h7f_A 253 -GRSGLIVGKQQYAKAINS------AVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAK 325 (447)
T ss_dssp -CSCEEEEECGGGHHHHHH------HHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred -CCeEEEEECHHHHHHHhh------hcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 688999999988777654 112223332 23334444445543322 345677888888888888764 111
Q ss_pred CCeeeEe--ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe----ec-------CCEEEEeCCCC----CCHHHH
Q psy14484 352 PKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----PI-------GNTVYLMPPYI----LNKNEI 414 (430)
Q Consensus 352 ~~~~~~~--~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----~~-------~~~lR~~~~~~----~t~e~i 414 (430)
+++..+. ..+.++.+++. .... . ...+.+.|.++||.+. +. ++.+|+.++.. ++++++
T Consensus 326 ~g~~~~~~~~~~~~~~~~~~-~~~~-~---~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei 400 (447)
T 3h7f_A 326 AGVSVVSGGTDVHLVLVDLR-DSPL-D---GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEF 400 (447)
T ss_dssp TTCEEGGGSCSSSEEEEECT-TSSC-C---HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHH
T ss_pred CCeEEecCCCCCCEEEEEcC-CCCC-C---HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHH
Confidence 1222211 23455566654 3211 1 2456666777799887 32 36799987665 679999
Q ss_pred HHHHHHHHHHHHH
Q psy14484 415 QHMTSAIFQTFNE 427 (430)
Q Consensus 415 ~~~~~~l~~~l~~ 427 (430)
++++++|++++.+
T Consensus 401 ~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 401 TEVADIIATALAT 413 (447)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998864
No 191
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.87 E-value=2.2e-21 Score=186.05 Aligned_cols=326 Identities=12% Similarity=0.027 Sum_probs=196.0
Q ss_pred CCC-EEEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCC-CCeEEEcCCchHHHHH
Q psy14484 32 SGK-RYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDGASAVEV 109 (430)
Q Consensus 32 ~g~-~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgteA~~~ 109 (430)
.|. .++|+..+-+. . .-+|++++++. .+ ..+.....++++.+++.++.. ++++++++||++|+..
T Consensus 25 ~g~~~v~~~~~~~~~--~-~~~~~v~~a~~----~~------~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~ 91 (374)
T 2aeu_A 25 KGRDALYDLSGLSGG--F-LIDEKDKALLN----TY------IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILA 91 (374)
T ss_dssp TCGGGCEECSSCCCC--C-CCCHHHHHHHT----ST------THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred cCccceeeecccCCC--C-CCCHHHHHHHH----Hh------cCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHH
Confidence 455 56676554211 1 13677777775 11 111334467777777788642 3789999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++.+ +++.|++.+++||++...... ..........+ . |++
T Consensus 92 ~~~~~----------~gd~Vl~~~~~y~~~~~~~~~----------~~~~g~~~~~v--~-----------------d~~ 132 (374)
T 2aeu_A 92 TILAL----------KPKKVIHYLPELPGHPSIERS----------CKIVNAKYFES--D-----------------KVG 132 (374)
T ss_dssp HHHHH----------CCSEEEEECSSSSCCTHHHHH----------HHHTTCEEEEE--S-----------------CHH
T ss_pred HHHhC----------CCCEEEEecCCCCccHHHHHH----------HHHcCcEEEEe--C-----------------CHH
Confidence 99866 246899999999986431100 00011122233 1 678
Q ss_pred HHHHHHHhCCCCeEE-EEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee-
Q psy14484 190 DLEILLKKNHNKIAA-IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL- 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~-vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~- 267 (430)
+++++ + +++++ |++++ ++|++|. +...+++|.++|++||+++|+||+|..+ ..+...........+|++
T Consensus 133 ~l~~~-~---~~~~~~v~~~~-p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~di~~ 203 (374)
T 2aeu_A 133 EILNK-I---DKDTLVIITGS-TMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGAR-VRLLFNQPPALKLGADLVV 203 (374)
T ss_dssp HHHTT-C---CTTEEEEEECB-CTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHH-HHHHTTCCCHHHHTCSEEE
T ss_pred HHHhc-C---CCccEEEEEcc-CCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcccc-cccccccCCccccCCcEEE
Confidence 88776 3 46788 88888 8999883 4455999999999999999999988633 111110000111245766
Q ss_pred -eeecccCCCccccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH----H
Q psy14484 268 -CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKI----T 342 (430)
Q Consensus 268 -~~sK~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l----~ 342 (430)
++||.++| +++|++++++++++.+.. .....+.+.+++.+.++.++|+.+.. +..++..+..+.+ +
T Consensus 204 ~S~sK~l~g--~~~G~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~~~ 274 (374)
T 2aeu_A 204 TSTDKLMEG--PRGGLLAGKKELVDKIYI------EGTKFGLEAQPPLLAGIYRALKNFNL-ERIRKAFERAKNFDLSKI 274 (374)
T ss_dssp EETTSSSSS--CSCEEEEEEHHHHHHHHH------HHHTTTCBCCHHHHHHHHHHHHHCCH-HHHHHHHHHHHHCCCHHH
T ss_pred ecCcccccC--cceEEEEECHHHHHHHHH------hhccccCCCCHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHH
Confidence 58899875 699999999999887765 11112234578888888888875422 1223333333333 3
Q ss_pred HHHHc-hhcC---CCee-eEeecceEEEEEEeecCCccchhHHHHHHHHH-HHCCcEEeec------CCEEEEeCCC-CC
Q psy14484 343 KALTS-LITH---PKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA-LKNELLLRPI------GNTVYLMPPY-IL 409 (430)
Q Consensus 343 ~~l~~-l~~~---~~~~-~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l-~~~Gv~~~~~------~~~lR~~~~~-~~ 409 (430)
+.|.+ +... +++. ...+.|.++.+... .... ......+++..+ .++||.+.|+ .+++||+++. ..
T Consensus 275 ~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~ 352 (374)
T 2aeu_A 275 EKLNKELKAIDDNINIVYERTPTGFVIKRVYK-DDTI-NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDA 352 (374)
T ss_dssp HHHHHHHTTTCTTEEEEEEECSSEEEEEEEES-SHHH-HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGG
T ss_pred HHHHHhhhhhhhccCcceeeCCceEEEEeecc-cccc-cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchH
Confidence 44432 2221 1222 23556666554322 1000 000012355444 5679999875 2479998864 23
Q ss_pred CHHHHHHHHHHHHHHHHHhh
Q psy14484 410 NKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 410 t~e~i~~~~~~l~~~l~~~~ 429 (430)
++++++++++.|++++.++.
T Consensus 353 ~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 353 ERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 44458999999998888763
No 192
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.87 E-value=4.1e-21 Score=185.35 Aligned_cols=286 Identities=11% Similarity=0.037 Sum_probs=184.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+.++...++++.|+++.+ .+.+++++||++|++.++.++ . +++.|++.++.||+.........
T Consensus 62 ~r~~~p~~~~l~~~la~l~g--~~~~~~~~sG~~Ai~~~~~l~-~--------~gd~Vi~~~~~y~~~~~~~~~~~---- 126 (400)
T 3nmy_A 62 SRTHNPTRFAYERCVAALEG--GTRAFAFASGMAATSTVMELL-D--------AGSHVVAMDDLYGGTFRLFERVR---- 126 (400)
T ss_dssp TTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHTTS-C--------TTCEEEEESSCCHHHHHHHHHTH----
T ss_pred ccCCCHHHHHHHHHHHHHhC--CCCEEEecCHHHHHHHHHHHc-C--------CCCEEEEeCCCchHHHHHHHHhh----
Confidence 35677889999999999985 458888999999999854332 1 56789999999986543322210
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
+.....+..+++.. |+++++++++ +++++|++|+ ++|++|.+.+ +++|.++
T Consensus 127 ----~~~~g~~~~~v~~~-----------------d~~~l~~~i~---~~~~~v~~e~-~~np~G~~~~----l~~i~~l 177 (400)
T 3nmy_A 127 ----RRTAGLDFSFVDLT-----------------DPAAFKAAIR---ADTKMVWIET-PTNPMLKLVD----IAAIAVI 177 (400)
T ss_dssp ----HHHHCCEEEEECTT-----------------SHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHH
T ss_pred ----HhhcCeEEEEECCC-----------------CHHHHHHHhc---cCCCEEEEEC-CCCCCCeeec----HHHHHHH
Confidence 11112333455443 7899999885 5789999999 9999998877 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEE--EEE-cHHHHHhhhccCCcccccccCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSL--VMT-TDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~--~~~-~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
|++||+++|+||+|+.. .......++..+.+.+++|.++|++.++|+ ++. ++++.+.+.. .....+.
T Consensus 178 a~~~g~~livDe~~~~~----~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~------~~~~~g~ 247 (400)
T 3nmy_A 178 ARKHGLLTVVDNTFASP----MLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF------LQNSIGG 247 (400)
T ss_dssp HHHTTCEEEEECTTTHH----HHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH------HHHHHCC
T ss_pred HHHcCCEEEEECCCccc----ccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH------HHHhcCC
Confidence 99999999999998621 111111224434445688999985456655 443 5677766654 2233445
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeE------------------eecceEEEEEEee
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF------------------RQKGMIWAFDVII 370 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~------------------~~~g~~~~~~~~~ 370 (430)
..+++.+..+...++.+. ...++..++++++.+.|++. |.+..+ ++.|.+++|++.
T Consensus 248 ~~~~~~a~~~l~~l~~l~--~r~~~~~~~a~~l~~~L~~~---p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~- 321 (400)
T 3nmy_A 248 VQGPFDSFLALRGLKTLP--LRMRAHCENALALAQWLETH---PAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLK- 321 (400)
T ss_dssp BCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET-
T ss_pred CCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHcC---CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeC-
Confidence 567777666666555432 23455566666776766543 433333 677999999997
Q ss_pred cCCccchhHHHHHHHHHHHCC----------cEEee------------------cCCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 371 EDPEQIETFSKKFFVAALKNE----------LLLRP------------------IGNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 371 ~~~~~~~~~a~~~~~~l~~~G----------v~~~~------------------~~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
.+ .+.+..+.+.+.-.+ ++..| ..+.+|+++.....++.++.+.++|
T Consensus 322 ~~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al 396 (400)
T 3nmy_A 322 GG----FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERAL 396 (400)
T ss_dssp TH----HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred Cc----HHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHH
Confidence 42 112356666654322 12211 1368999988766655555544444
No 193
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.87 E-value=5.3e-20 Score=183.94 Aligned_cols=320 Identities=10% Similarity=0.061 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhh----hcCCC--CCcEEEEEcCCCCCcchhhhccCCCc
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWY----NKGFL--NKKKFICLQNSYHGETLGALAVTNIQ 150 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~----~~g~~--~~~~vl~~~~~yhg~~~~~~~~~~~~ 150 (430)
....+++++++++++.+.+.++|++|||+|+..|+++++.+.. ..|.. ++..|++.+ ..|.+...+....+..
T Consensus 148 ~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~-~~h~s~~~~~~~~g~g 226 (515)
T 2jis_A 148 LMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSK-ECHYSIQKGAAFLGLG 226 (515)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET-TSCTHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC-CccHHHHHHHHHcCCC
Confidence 4456788899999986677999999999999999999875321 12210 122455544 4455443333222210
Q ss_pred cchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHHHH
Q psy14484 151 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYLKL 227 (430)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l~~ 227 (430)
..+++.++.+..++. |+++|++++++. +.++++|+++. +++++|.+.| +++
T Consensus 227 ---------~~~v~~v~~~~~~~~------------d~~~L~~~i~~~~~~g~~~~~Vv~~~-~~n~tG~i~~----l~~ 280 (515)
T 2jis_A 227 ---------TDSVRVVKADERGKM------------VPEDLERQIGMAEAEGAVPFLVSATS-GTTVLGAFDP----LEA 280 (515)
T ss_dssp ---------GGGEEEECBCTTSCB------------CHHHHHHHHHHHHHTTCEEEEEEEEB-SCTTTCCBCC----HHH
T ss_pred ---------CCcEEEEecCCCCcC------------CHHHHHHHHHHHHhCCCCcEEEEEeC-CCCCCCCccC----HHH
Confidence 013345555433333 889999999752 22588899988 8899998887 999
Q ss_pred HHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeee--ecccCCCccccEEEEEcHH--HHHhhhc---c---
Q psy14484 228 VREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCL--SKGITGGYLPLSLVMTTDK--IYNSIYY---K--- 296 (430)
Q Consensus 228 l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~--sK~l~gG~~~ig~~~~~~~--~~~~~~~---~--- 296 (430)
|.++|+++|+++|+|++|+++......+.....++ .+|++++ +|.++++ .++|+++++++ +++.... +
T Consensus 281 I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~ 359 (515)
T 2jis_A 281 IADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLF 359 (515)
T ss_dssp HHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC------
T ss_pred HHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhcc
Confidence 99999999999999999987654333222223344 6798887 6988766 57999999876 6543211 0
Q ss_pred CCcc--c-ccccCCC------CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEE
Q psy14484 297 NNIN--I-FLHSHSY------SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFD 367 (430)
Q Consensus 297 ~~~~--~-~~~~~t~------~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~ 367 (430)
+... . .....++ ....+.+.+++.++....-++..++..++++++.+.|+++.++..+. ++....+.|.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~--~~~~~~v~f~ 437 (515)
T 2jis_A 360 QQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVM--EPEFVNVCFW 437 (515)
T ss_dssp ---CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS--CCSSSEEEEE
T ss_pred CCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC--CCCeeEEEEE
Confidence 0000 0 0000111 11234444444444321123456677788888888887652221111 1223344554
Q ss_pred EeecCC-c---cchhH-------HHHHHHHHHHCCcEEee----c--CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q psy14484 368 VIIEDP-E---QIETF-------SKKFFVAALKNELLLRP----I--GNTVYLMP-PYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 368 ~~~~~~-~---~~~~~-------a~~~~~~l~~~Gv~~~~----~--~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.. +.. . ...++ +..+.+.|.+.|+.+.. . .+++|+++ +..+|+++|++++++|++++.+
T Consensus 438 ~~-p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 438 FV-PPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EC-CGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred Ee-CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 43 210 0 01111 22467788888976532 1 25899999 8999999999999999988764
No 194
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=8.2e-21 Score=185.14 Aligned_cols=289 Identities=16% Similarity=0.149 Sum_probs=187.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...+++++++++++. ++.++++||++|+..+++.+.. +++.||+.++.|++.......
T Consensus 110 r~~~~~~~~l~~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~--------~Gd~Vi~~~~~y~~~~~~~~~------- 172 (445)
T 1qgn_A 110 RYGNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIET------- 172 (445)
T ss_dssp GGCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSC--------SSCEEEEETTSCHHHHHHHHH-------
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhC--------CCCEEEEcCCCchhHHHHHHH-------
Confidence 45678889999999999963 4667778888999999997653 567899999888764321110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCe-EEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI-AAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~-~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.......++.+++.. |+++|++++++ ++ ++|++++ ++|++|.+.+ +++|.++
T Consensus 173 --~~~~~G~~v~~v~~~-----------------d~~~l~~ai~~---~tv~lV~le~-p~NptG~v~d----l~~I~~l 225 (445)
T 1qgn_A 173 --ILPKMGITATVIDPA-----------------DVGALELALNQ---KKVNLFFTES-PTNPFLRCVD----IELVSKL 225 (445)
T ss_dssp --TGGGGTCEEEEECSS-----------------CHHHHHHHHHH---SCEEEEEEES-SCTTTCCCCC----HHHHHHH
T ss_pred --HHHHcCCEEEEeCCC-----------------CHHHHHHHhcc---CCCCEEEEeC-CCCCCCcccC----HHHHHHH
Confidence 011112333455432 78999999973 45 8999999 9999998877 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCCc-cccEEEEEcHHHHHhhhccCCcccccccCCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGGY-LPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG~-~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~ 308 (430)
|+++|+++|+||+|+.. ... ......+|+++ ++|.++|+. .++|++++++++++.+.. .......
T Consensus 226 a~~~g~~livD~a~~~~-~~~-----~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~------~~~~~g~ 293 (445)
T 1qgn_A 226 CHEKGALVCIDGTFATP-LNQ-----KALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRN------LHHILGG 293 (445)
T ss_dssp HHHTTCEEEEECTTTCT-TTC-----CTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHH------HHHHHCC
T ss_pred HHHcCCEEEEECCCccc-ccC-----CccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHH------HHHHhCC
Confidence 99999999999999732 111 12344578875 779998742 369999999998877654 1111111
Q ss_pred CCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCee----------eEeecceEEEEEEeecCC
Q psy14484 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKII----------NFRQKGMIWAFDVIIEDP 373 (430)
Q Consensus 309 ~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~~~ 373 (430)
..+++.+..+...++.+. ...++..++.+++.+.|++... .|.+. ..++.|.++.|++. .+
T Consensus 294 ~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~-~~- 369 (445)
T 1qgn_A 294 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD-GD- 369 (445)
T ss_dssp CCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES-SC-
T ss_pred CCCHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC-CC-
Confidence 235655554444454332 1234445556677777765411 11110 11346889999887 42
Q ss_pred ccchhHHHHHHHHHHHCCcEEe----------e------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 374 EQIETFSKKFFVAALKNELLLR----------P------------------IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 374 ~~~~~~a~~~~~~l~~~Gv~~~----------~------------------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...+..+.+.|...++.++ | ..+.+|+++. .||++.+++.|++++
T Consensus 370 ---~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al 442 (445)
T 1qgn_A 370 ---LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQAL 442 (445)
T ss_dssp ---HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHH
Confidence 1113456666542222111 0 0268999877 468999999999998
Q ss_pred HHh
Q psy14484 426 NEV 428 (430)
Q Consensus 426 ~~~ 428 (430)
.++
T Consensus 443 ~~~ 445 (445)
T 1qgn_A 443 DSI 445 (445)
T ss_dssp HHC
T ss_pred hhC
Confidence 753
No 195
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.87 E-value=4.6e-20 Score=183.99 Aligned_cols=321 Identities=11% Similarity=0.054 Sum_probs=193.6
Q ss_pred HHHHHHHHHHhhcCCC--CCeEEEcCCchHHHHHHHHHHHHhhh----hcCCCC-Cc-EEEEEcCCCCCcchhhhccCCC
Q psy14484 78 PVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYWY----NKGFLN-KK-KFICLQNSYHGETLGALAVTNI 149 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~--~~~v~~~~sgteA~~~al~~~~~~~~----~~g~~~-~~-~vl~~~~~yhg~~~~~~~~~~~ 149 (430)
...++.++++++++.+ .+.++|++|||+|+..|+++++.... ..|... ++ .|++.+ ..|.....+....+.
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~-~~h~s~~~~~~~~g~ 211 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE-QSHYSIKKAGAALGF 211 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET-TSCTHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC-cchHHHHHHHHHcCC
Confidence 3456668889998766 67899999999999999999875321 112100 13 455544 444443222221110
Q ss_pred ccchhhhhccCC-CeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHH
Q psy14484 150 QSFKEIYTSLLN-KTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYL 225 (430)
Q Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l 225 (430)
.. .++.++.+..++. |+++|++++++. +.++++|+++. +++++|.+.+ +
T Consensus 212 ----------g~~~v~~v~~~~~~~~------------d~~~L~~~i~~~~~~g~~~~~V~~~~-~~~~tG~i~~----l 264 (504)
T 2okj_A 212 ----------GTDNVILIKCNERGKI------------IPADFEAKILEAKQKGYVPFYVNATA-GTTVYGAFDP----I 264 (504)
T ss_dssp ----------CGGGEEEECBCTTSCB------------CHHHHHHHHHHHHHTTCEEEEEEECB-SCSSSCCBCC----H
T ss_pred ----------CcccEEEEecCCCCCC------------CHHHHHHHHHHHHHCCCCceEEEEeC-CCCCCCCcCC----H
Confidence 11 3345555433333 889999999752 22588888888 8889998877 9
Q ss_pred HHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcH-HHHHhhhccCCccc
Q psy14484 226 KLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTD-KIYNSIYYKNNINI 301 (430)
Q Consensus 226 ~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~-~~~~~~~~~~~~~~ 301 (430)
++|.++|++||+++|+|++|+++......+.....++ .+|+++++ |.++++ .++|++++++ ++++..... ....
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~-~~~~ 342 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQM-CAGY 342 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCC-CCSS
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcC-CCcc
Confidence 9999999999999999999986643222111222333 57888876 888766 5899999986 455432110 0000
Q ss_pred cccc----------------CCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEE
Q psy14484 302 FLHS----------------HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA 365 (430)
Q Consensus 302 ~~~~----------------~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~ 365 (430)
+... .+...+.+.+.++++++..-.-++..++..++++++.+.|+++..+..+....+...++.
T Consensus 343 l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~ 422 (504)
T 2okj_A 343 LFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVC 422 (504)
T ss_dssp SCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEE
T ss_pred ccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEE
Confidence 0000 011123555555555443211134556677788888888876422211111024455556
Q ss_pred EEEeecCCc----cc-------hhHHHHHHHHHHHCCcE-Eee--c-C--CEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q psy14484 366 FDVIIEDPE----QI-------ETFSKKFFVAALKNELL-LRP--I-G--NTVYLMPP-YILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 366 ~~~~~~~~~----~~-------~~~a~~~~~~l~~~Gv~-~~~--~-~--~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~ 427 (430)
|... +... .. ......+.+.|.++|++ +.+ . + +++|+++. ..+|+++|++++++|++++++
T Consensus 423 f~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 423 FWYI-PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp EEEC-CGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEEe-CccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 6553 2110 00 01135788889999964 332 1 2 47999985 889999999999999998877
Q ss_pred hh
Q psy14484 428 VI 429 (430)
Q Consensus 428 ~~ 429 (430)
++
T Consensus 502 ~~ 503 (504)
T 2okj_A 502 LH 503 (504)
T ss_dssp --
T ss_pred Hh
Confidence 64
No 196
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.87 E-value=2.6e-20 Score=183.26 Aligned_cols=335 Identities=8% Similarity=-0.044 Sum_probs=202.3
Q ss_pred CCCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcCCCCCe-----EEEcCCchHHHHHHHHHHHHhhhh---
Q psy14484 50 HSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQYKLGH-----CFYGSDGASAVEVALKMSFHYWYN--- 120 (430)
Q Consensus 50 ~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~-----v~~~~sgteA~~~al~~~~~~~~~--- 120 (430)
+.+|.+.+++.+++...... ...........+++++++++++.+.+. +++++||+||+..++.+++...+.
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~ 132 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME 132 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35688988888876542111 111122245678888899999766554 999999999999999887652211
Q ss_pred -cCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHh
Q psy14484 121 -KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKK 197 (430)
Q Consensus 121 -~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~ 197 (430)
.|.+ .++.||+.+ +|.......... ..+.+.++.+. .+.. |+++|+++++
T Consensus 133 ~~G~~~~~~~vi~~~--~h~~~~~~~~~~------------G~~v~~v~~~~~~~~~------------d~~~l~~~i~- 185 (452)
T 2dgk_A 133 AAGKPTDKPNLVCGP--VQICWHKFARYW------------DVELREIPMRPGQLFM------------DPKRMIEACD- 185 (452)
T ss_dssp HTTCCCSCCEEEESS--CCHHHHHHHHHT------------TCEEEECCCBTTBCSC------------CHHHHHHHCC-
T ss_pred hcCCCCCCcEEEECC--CcHHHHHHHHHc------------CceEEEEecCCCCCeE------------CHHHHHHHHh-
Confidence 2211 134666654 664433222211 22334444432 2232 8899999985
Q ss_pred CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc------CCEEEEeccccCCCC---ccc-ccccccCCCCCcee
Q psy14484 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY------NIHLIADEIAVGCGR---TGK-FFACEHAEIWPDFL 267 (430)
Q Consensus 198 ~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~------gi~li~DEv~~g~g~---~g~-~~~~~~~~~~~d~~ 267 (430)
+++++|++.. +++++|.+.+ +++|.++|+++ |+++|+|++|.++.. .+. .+.+.. ...|.+
T Consensus 186 --~~t~~v~~~~-~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~d~~ 256 (452)
T 2dgk_A 186 --ENTIGVVPTF-GVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRL--PRVKSI 256 (452)
T ss_dssp --TTEEEEECBB-SCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTS--TTEEEE
T ss_pred --hCCEEEEEEc-CCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCC--CCCcEE
Confidence 4678888887 8888998877 99999999996 999999999986532 111 111111 135766
Q ss_pred eee--cccCCCccccEEEEEcHH-HH-Hhhhcc-CCcc----cccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHH
Q psy14484 268 CLS--KGITGGYLPLSLVMTTDK-IY-NSIYYK-NNIN----IFLHSHSYSGNPLACCAALATLEIFNK---DNILQRIS 335 (430)
Q Consensus 268 ~~s--K~l~gG~~~ig~~~~~~~-~~-~~~~~~-~~~~----~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~ 335 (430)
+++ |.+.+| +++|+++++++ +. +.+... .... .+....+..+ ....+..++++.+.. ++..++..
T Consensus 257 ~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~aal~~lg~~g~~~~~~~~~ 333 (452)
T 2dgk_A 257 SASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPA--GQVIAQYYEFLRLGREGYTKVQNASY 333 (452)
T ss_dssp EEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChh--HHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 665 865555 68999999754 33 333210 0000 0000111111 122233334443322 34456667
Q ss_pred HHHHHHHHHHHchhcCCCeeeE-e----ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----c----CCEEE
Q psy14484 336 QDMKKITKALTSLITHPKIINF-R----QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----I----GNTVY 402 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~-~----~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~----~~~lR 402 (430)
++++++.+.|+++ +.+.-+ + ....++.|.+. ........ ..++.+.|.++|+.+.. . ..++|
T Consensus 334 ~~a~~l~~~L~~~---~~~~~~~~~~~~~~~~~v~f~~~-~~~~~~~~-~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lR 408 (452)
T 2dgk_A 334 QVAAYLADEIAKL---GPYEFICTGRPDEGIPAVCFKLK-DGEDPGYT-LYDLSERLRLRGWQVPAFTLGGEATDIVVMR 408 (452)
T ss_dssp HHHHHHHHHHHTT---SSEEEEEECCTTTBSSEEEEEEC-TTCCCSCC-HHHHHHHHHHTTCBCCEEECSTTCTTCEEEE
T ss_pred HHHHHHHHHHHhC---CCeEEecCCCCCCCeEEEEEEec-CcccccCC-HHHHHHHHHhcCCeeeeeeCCcccCCeEEEE
Confidence 7788888888765 332222 2 35567777766 42100000 25789999999996432 2 24899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
+++...+|+++++++++.|++++.++
T Consensus 409 is~~~~~t~e~id~li~~l~~~~~~~ 434 (452)
T 2dgk_A 409 IMCRRGFEMDFAELLLEDYKASLKYL 434 (452)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988754
No 197
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.87 E-value=1.9e-21 Score=190.97 Aligned_cols=288 Identities=13% Similarity=0.167 Sum_probs=184.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
....+...++++++++.++ .+++++++||++|+..++++ .. +++.||+.++.|+++.......
T Consensus 129 ~~g~~~~~~l~~~la~~~g--~~~~i~~~sGt~al~~~l~~-~~--------~Gd~Vi~~~~~y~~~~~~~~~~------ 191 (464)
T 1ibj_A 129 RSGNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTHL-IK--------NGEEIVAGDDVYGGSDRLLSQV------ 191 (464)
T ss_dssp TTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHTT-SC--------TTCEEEEESSCCHHHHHHHHHT------
T ss_pred CCCCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHH-hC--------CCCEEEEECCCchhHHHHHHHH------
Confidence 3456788999999999985 45888899999999887752 21 5678999999998763211000
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......+...++.. |+++|+++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 192 ---~~~~G~~v~~v~~~-----------------d~~~l~~~i~---~~tk~v~l~~-p~NptG~v~~----l~~i~~la 243 (464)
T 1ibj_A 192 ---VPRSGVVVKRVNTT-----------------KLDEVAAAIG---PQTKLVWLES-PTNPRQQISD----IRKISEMA 243 (464)
T ss_dssp ---SGGGTCEEEEECTT-----------------SHHHHHHHCC---SSEEEEEECS-SCTTTCCCCC----HHHHHHHH
T ss_pred ---HHHcCCEEEEeCCC-----------------CHHHHHHHhc---cCceEEEEeC-CCCCCCEeec----HHHHHHHH
Confidence 00112233444432 7889998885 5789999999 9999998876 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC--CccccEEEEEcH-HHHHhhhccCCcccccccCC
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG--GYLPLSLVMTTD-KIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g--G~~~ig~~~~~~-~~~~~~~~~~~~~~~~~~~t 307 (430)
++||+++|+||+|.. +.... ..+ ..+|++ +++|.+++ | +++|++++++ ++.+.+.. ......
T Consensus 244 ~~~gi~livDea~~~-g~~~~--~~~---~~~div~~S~sK~~~g~~G-l~~G~l~~~~~~l~~~l~~------~~~~~g 310 (464)
T 1ibj_A 244 HAQGALVLVDNSIMS-PVLSR--PLE---LGADIVMHSATKFIAGHSD-VMAGVLAVKGEKLAKEVYF------LQNSEG 310 (464)
T ss_dssp HTTTCEEEEECTTTC-TTTCC--GGG---TTCSEEEEETTTTTTCSSC-CCCEEEEECSHHHHHHHHH------HHHHTT
T ss_pred HHcCCEEEEECCCcc-cccCC--hhh---cCCEEEEECCcccccCCCC-CcEEEEEEChHHHHHHHHH------HHHhcC
Confidence 999999999999973 21111 112 345766 58899986 5 6889999984 77776654 111123
Q ss_pred CCCCHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHH-------HchhcCCCee----eEeecceEEEEEEeecCCc
Q psy14484 308 YSGNPLACCAALATLEIFNK--DNILQRISQDMKKITKAL-------TSLITHPKII----NFRQKGMIWAFDVIIEDPE 374 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~l~~~l-------~~l~~~~~~~----~~~~~g~~~~~~~~~~~~~ 374 (430)
...+++++.++.++|+.+.. +...+.+....+++.+.- +.|..+|.+. ..++.|.++++++. +
T Consensus 311 ~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~--- 386 (464)
T 1ibj_A 311 SGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-S--- 386 (464)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-C---
T ss_pred CCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-C---
Confidence 34467777776666653211 111222233333332210 1122223221 12245778888765 3
Q ss_pred cchhHHHHHHHHHHHCCcEEeec----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 375 QIETFSKKFFVAALKNELLLRPI----------------------------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 375 ~~~~~a~~~~~~l~~~Gv~~~~~----------------------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
.+.+..+.+.|...|+.+..+ .+.+|++++. |++++++++|++++.
T Consensus 387 --~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~ 460 (464)
T 1ibj_A 387 --VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFK 460 (464)
T ss_dssp --HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 111345777776566554322 2579999886 899999999999987
Q ss_pred Hh
Q psy14484 427 EV 428 (430)
Q Consensus 427 ~~ 428 (430)
++
T Consensus 461 ~~ 462 (464)
T 1ibj_A 461 TF 462 (464)
T ss_dssp SC
T ss_pred hc
Confidence 53
No 198
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.87 E-value=9.4e-21 Score=183.34 Aligned_cols=286 Identities=14% Similarity=0.135 Sum_probs=184.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+.++...++++.++++++.. +.++++||++|+..+++ +.. +++.|++.++.|++........
T Consensus 63 r~~~p~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~-l~~--------~gd~Vl~~~~~y~~~~~~~~~~------ 125 (403)
T 3cog_A 63 RSGNPTRNCLEKAVAALDGAK--YCLAFASGLAATVTITH-LLK--------AGDQIICMDDVYGGTNRYFRQV------ 125 (403)
T ss_dssp ---CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHT-TSC--------TTCEEEEESSCCHHHHHHHHHT------
T ss_pred CCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-HhC--------CCCEEEEeCCCcchHHHHHHHH------
Confidence 466788889999999999633 56666778899999988 532 5678999999998753221110
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.+++.. |+++++++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 126 ---~~~~G~~v~~v~~~-----------------d~~~l~~~i~---~~t~~v~~~~-p~nptG~~~~----l~~i~~la 177 (403)
T 3cog_A 126 ---ASEFGLKISFVDCS-----------------KIKLLEAAIT---PETKLVWIET-PTNPTQKVID----IEGCAHIV 177 (403)
T ss_dssp ---GGGGTCEEEEECTT-----------------SHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHH
T ss_pred ---HHHcCCEEEEECCC-----------------CHHHHHHhcC---cCCeEEEEEC-CCCCCCeeeC----HHHHHHHH
Confidence 01112233444432 6788888885 5789999999 9999998887 99999999
Q ss_pred HhcC-CEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC-CccccEEEEEc-HHHHHhhhccCCcccccccCC
Q psy14484 233 NNYN-IHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG-GYLPLSLVMTT-DKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 233 ~~~g-i~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g-G~~~ig~~~~~-~~~~~~~~~~~~~~~~~~~~t 307 (430)
+++| +++|+||+|+.+.. ... .+..+|++ +++|.++| |..++|+++++ +++.+.+.. .....+
T Consensus 178 ~~~g~~~livD~~~~~~~~-~~~-----~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~------~~~~~g 245 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYF-QRP-----LALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRF------LQNSLG 245 (403)
T ss_dssp TSSSCCEEEEECTTTCTTT-CCT-----TTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHH------HHHHHC
T ss_pred HHcCCCEEEEECCCccccc-CCc-----cccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHH------HHHhcC
Confidence 9999 99999999985432 111 12356777 67899986 43468999995 787776654 222233
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHc-----------hhcCCCee----eEeecceEEEEEEeecC
Q psy14484 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTS-----------LITHPKII----NFRQKGMIWAFDVIIED 372 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~-----------l~~~~~~~----~~~~~g~~~~~~~~~~~ 372 (430)
...+++.+.++...++.+. ...++..++...+.+.+++ |..+|.+. ..++.|.++.|.+. ..
T Consensus 246 ~~~~~~~~~~~~~~l~~l~--~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~-~~ 322 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLH--VRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIK-GT 322 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES-SC
T ss_pred CCCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEec-CC
Confidence 4557777776666665332 1233334444444444432 12223221 12345888888876 42
Q ss_pred CccchhHHHHHHHHHHHCCcEEee-----------------------------c--CCEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 373 PEQIETFSKKFFVAALKNELLLRP-----------------------------I--GNTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 373 ~~~~~~~a~~~~~~l~~~Gv~~~~-----------------------------~--~~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
. ....+.+.+.|+.... + .+.+|++++...++++|+.+.++|
T Consensus 323 ----~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al 395 (403)
T 3cog_A 323 ----L---QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQAL 395 (403)
T ss_dssp ----H---HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred ----H---HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHH
Confidence 1 2344455566764321 1 368999999988877777777777
Q ss_pred HHHH
Q psy14484 422 FQTF 425 (430)
Q Consensus 422 ~~~l 425 (430)
++++
T Consensus 396 ~~~~ 399 (403)
T 3cog_A 396 KAAH 399 (403)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 6543
No 199
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=1.3e-20 Score=181.86 Aligned_cols=287 Identities=14% Similarity=0.141 Sum_probs=185.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++++. +++++++||++|++.+++ +.. +++.|++..+.||+........
T Consensus 51 ~~~~~~~~~lr~~la~~~g~--~~~i~~~sGt~a~~~al~-~~~--------~gd~Vi~~~~~y~~~~~~~~~~------ 113 (393)
T 1n8p_A 51 RSQNPNRENLERAVAALENA--QYGLAFSSGSATTATILQ-SLP--------QGSHAVSIGDVYGGTHRYFTKV------ 113 (393)
T ss_dssp TTCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHH-TSC--------SSCEEEEESSCCHHHHHHHHHT------
T ss_pred cCCChhHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHH-HcC--------CCCEEEEeCCCchHHHHHHHHH------
Confidence 45667888999999999953 367778888999999999 543 5678999999988643211000
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
......++.+++.+ | ++|+++++ +++++|++++ ++|++|.+.+ +++|.++|
T Consensus 114 ---~~~~G~~v~~v~~~-----------------d-~~l~~~i~---~~t~lv~~~~-~~nptG~~~~----l~~i~~la 164 (393)
T 1n8p_A 114 ---ANAHGVETSFTNDL-----------------L-NDLPQLIK---ENTKLVWIET-PTNPTLKVTD----IQKVADLI 164 (393)
T ss_dssp ---STTTCSCCEEESSH-----------------H-HHHHHHSC---SSEEEEEECS-SCTTTCCCCC----HHHHHHHH
T ss_pred ---HHHcCcEEEEeCCC-----------------h-HHHHHhcc---cCceEEEEEC-CCCCcceecC----HHHHHHHH
Confidence 01112233444432 7 88888885 5789999999 9999998887 99999999
Q ss_pred Hhc----CCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCcccc-EEEEEc-HHHHHhhhccCCcccccc
Q psy14484 233 NNY----NIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPL-SLVMTT-DKIYNSIYYKNNINIFLH 304 (430)
Q Consensus 233 ~~~----gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~i-g~~~~~-~~~~~~~~~~~~~~~~~~ 304 (430)
+++ |+++|+||+|+.+.. .... ...+|++ +++|.++++++++ |+++++ +++++.+.. ...
T Consensus 165 ~~~~~~~~~~livD~a~~~~~~-~~~~-----~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~------~~~ 232 (393)
T 1n8p_A 165 KKHAAGQDVILVVDNTFLSPYI-SNPL-----NFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQF------LQN 232 (393)
T ss_dssp HHHTTTTTCEEEEECTTTHHHH-CCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH------HHH
T ss_pred HHhCCCCCCEEEEeCCcccccc-CCHH-----HcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHH------HHH
Confidence 999 999999999985432 2221 1236766 6789998743788 888885 777777654 111
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc------CCCee----------eEee-c-ceEEEE
Q psy14484 305 SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT------HPKII----------NFRQ-K-GMIWAF 366 (430)
Q Consensus 305 ~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~------~~~~~----------~~~~-~-g~~~~~ 366 (430)
......++..+.++..+++.+. ...++..++.+.+.+.|++... .|.+. ..++ . |.++.+
T Consensus 233 ~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~ 310 (393)
T 1n8p_A 233 AIGAIPSPFDAWLTHRGLKTLH--LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISF 310 (393)
T ss_dssp HHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEE
T ss_pred hcCCCCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEE
Confidence 1112335665555555554331 2234445556666666654311 12111 0123 4 778888
Q ss_pred EEeecCCccchhHHHHHHHHHHHCCcEEe----------e---c---------------CCEEEEeCCCCCCHHHHHHHH
Q psy14484 367 DVIIEDPEQIETFSKKFFVAALKNELLLR----------P---I---------------GNTVYLMPPYILNKNEIQHMT 418 (430)
Q Consensus 367 ~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----------~---~---------------~~~lR~~~~~~~t~e~i~~~~ 418 (430)
.+. .+ ...+..+...+...++.++ | . .+.+|++++...++++++.+.
T Consensus 311 ~l~-~~----~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~ 385 (393)
T 1n8p_A 311 RIK-GG----AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIK 385 (393)
T ss_dssp EES-SC----HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHH
T ss_pred EeC-Cc----HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHH
Confidence 887 42 1113556666543332211 1 0 268999999999999999999
Q ss_pred HHHHHH
Q psy14484 419 SAIFQT 424 (430)
Q Consensus 419 ~~l~~~ 424 (430)
++|+++
T Consensus 386 ~al~~~ 391 (393)
T 1n8p_A 386 QALKQA 391 (393)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888764
No 200
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.86 E-value=8.1e-20 Score=177.95 Aligned_cols=318 Identities=12% Similarity=0.131 Sum_probs=198.2
Q ss_pred CHHHHHHHHHHHhhcccc--ccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcE
Q psy14484 52 NSYINKALKNQLNKLEHV--MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKK 128 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~ 128 (430)
+|++++++.+++...... ....+..+...++++.+++.++. +++++++||++|+..+++++ .. +++.
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--~~~i~~~~gt~al~~~~~~~~~~--------~gd~ 84 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--PYCVPTTSGSTALMLALEALGIG--------EGDE 84 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCC--------TTCE
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCC--------CcCE
Confidence 689999999998764321 11223345678999999999853 47888999999999999987 32 5678
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEE
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 207 (430)
|++..++|++........+ .....++.+. ++.. |+++|+++++ +++++|++
T Consensus 85 Vl~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------d~~~l~~~i~---~~~~~v~~ 136 (418)
T 2c81_A 85 VIVPSLTWIATATAVLNVN-------------ALPVFVDVEADTYCI------------DPQLIKSAIT---DKTKAIIP 136 (418)
T ss_dssp EEEESSSCTHHHHHHHHTT-------------CEEEEECBCTTTCSB------------CHHHHGGGCC---TTEEEECC
T ss_pred EEECCCccHhHHHHHHHcC-------------CEEEEEecCCCCCCc------------CHHHHHHhhC---CCCeEEEE
Confidence 9999999988754333211 1223444332 2222 7888888885 46777775
Q ss_pred ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCC-CcccccccccCCCCCceeee--ecccCCCccccEEEE
Q psy14484 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG-RTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVM 284 (430)
Q Consensus 208 ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g-~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~~~ 284 (430)
++ ++|...+ +++|.++|+++|+++|+||+|+.+. ..+... ...+ ..++.+| +|.+++| ++|+++
T Consensus 137 ~~----~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~-~~~~~s~s~~K~~~~g--~~g~~~ 203 (418)
T 2c81_A 137 VH----LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA--GTIG-DIGAFSCQQGKVLTAG--EGGIIV 203 (418)
T ss_dssp BC----CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEEEECCTTSSSCSS--SCEEEE
T ss_pred eC----CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEec--cccc-ceEEEeccCCcccCCC--CeEEEE
Confidence 43 4676555 9999999999999999999998654 222211 1111 1344566 8999874 789999
Q ss_pred Ec-HHHHHhhhc---cCCcc---------cccc-c---C----CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy14484 285 TT-DKIYNSIYY---KNNIN---------IFLH-S---H----SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITK 343 (430)
Q Consensus 285 ~~-~~~~~~~~~---~~~~~---------~~~~-~---~----t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~ 343 (430)
++ +++.+.+.. .+... .+.. . . ....+++..+.+...++.+ ++..++.+++.+++.+
T Consensus 204 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~l~~ 281 (418)
T 2c81_A 204 TKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQEL--DDKNAIREKNAMFLND 281 (418)
T ss_dssp ESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 85 677665542 01000 0110 0 0 0012233222222223222 3455666777777777
Q ss_pred HHHchhcCCCeeeE-eecc----e--EEEEEEeecCC-ccchhHHHHHHHHHHHC-CcE---Eeec--------------
Q psy14484 344 ALTSLITHPKIINF-RQKG----M--IWAFDVIIEDP-EQIETFSKKFFVAALKN-ELL---LRPI-------------- 397 (430)
Q Consensus 344 ~l~~l~~~~~~~~~-~~~g----~--~~~~~~~~~~~-~~~~~~a~~~~~~l~~~-Gv~---~~~~-------------- 397 (430)
.|+++ +.+... ...+ . ++.+.+. +.. .... ..++.+.|.++ ||. +.++
T Consensus 282 ~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~ 355 (418)
T 2c81_A 282 ALSKI---DGIKVMKRPPQVSRQTYYGYVFRFD-PVKFGGLN--ADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWT 355 (418)
T ss_dssp HHTTS---TTEEECCCCTTEEECCCSEEEEEEC-GGGTTTCC--HHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGG
T ss_pred HhccC---CCcccCCCCCCCcccccEEEEEEEc-cccccccC--HHHHHHHHHHcCCCCcccccccccccccCchhcccc
Confidence 77654 332221 2222 2 2334444 200 0011 36799999999 999 7642
Q ss_pred -----------------C----------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHHh
Q psy14484 398 -----------------G----------NTVYLMPPYIL-NKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 398 -----------------~----------~~lR~~~~~~~-t~e~i~~~~~~l~~~l~~~ 428 (430)
+ +.+|++++..+ |++|++.++++|++++.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 356 KNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp CTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 1 48999999999 9999999999999988753
No 201
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.2e-20 Score=183.81 Aligned_cols=290 Identities=14% Similarity=0.120 Sum_probs=183.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...++++.++++++. +..++++||++|++.+++.+.. +++.|++..+.||+.......+.
T Consensus 54 ~~~~~~~~~l~~~la~~~g~--~~~v~~~sGt~A~~~~l~~~~~--------~gd~vi~~~~~~~~~~~~~~~~~----- 118 (421)
T 2ctz_A 54 RIMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTLAQ--------AGDNIVSTPNLYGGTFNQFKVTL----- 118 (421)
T ss_dssp TTBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC--------TTCEEEECSCCCHHHHHHHHTHH-----
T ss_pred CCCChHHHHHHHHHHHHhCC--CceEEecCHHHHHHHHHHHHhC--------CCCEEEEeCCCchHHHHHHHHHH-----
Confidence 45667889999999999953 3567778889999999997743 66889999999998644321100
Q ss_pred hhhhhccCCCeeEe-CCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYII-TTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.....+..++ +.. |+++++++++ +++++|++++ ++|++|.+.+ +++|.++
T Consensus 119 ----~~~g~~~~~~~~~~-----------------d~~~l~~~i~---~~~~~v~~~~-~~n~~G~~~~----l~~i~~~ 169 (421)
T 2ctz_A 119 ----KRLGIEVRFTSREE-----------------RPEEFLALTD---EKTRAWWVES-IGNPALNIPD----LEALAQA 169 (421)
T ss_dssp ----HHTTCEEEECCTTC-----------------CHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHH
T ss_pred ----HHcCCEEEEECCCC-----------------CHHHHHHhhc---cCCeEEEEEC-CCCCCCcccC----HHHHHHH
Confidence 0111223344 322 7889998885 5789999999 9999998877 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCccccEEEEEcH---HH----HHhhhcc--CC--
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGYLPLSLVMTTD---KI----YNSIYYK--NN-- 298 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~~~ig~~~~~~---~~----~~~~~~~--~~-- 298 (430)
|++||+++|+||+|++++..+..+ +..+|++ +++|.+++...++|++++.+ ++ .+.+... +.
T Consensus 170 a~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g 244 (421)
T 2ctz_A 170 AREKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHG 244 (421)
T ss_dssp HHHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTT
T ss_pred HHHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhh
Confidence 999999999999995465443322 3357888 67899997336888877741 22 1222210 00
Q ss_pred c--------------ccc--cccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeE-----
Q psy14484 299 I--------------NIF--LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINF----- 357 (430)
Q Consensus 299 ~--------------~~~--~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~----- 357 (430)
. ..+ ........+++.++++...++.+. ...++..++.+++.+.|++. |.+..+
T Consensus 245 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~--~r~~~~~~~a~~l~~~L~~~---p~v~~v~~p~~ 319 (421)
T 2ctz_A 245 LRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLS--LRAERHVENTLHLAHWLLEQ---PQVAWVNYPGL 319 (421)
T ss_dssp BCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTC---TTEEEEECTTS
T ss_pred hhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHH--HHHHHHHHhHHHHHHHHHhC---CCeeEEECCCC
Confidence 0 000 011122456666666655555332 22444456777777777654 332222
Q ss_pred --------------eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe----------e-----------------
Q psy14484 358 --------------RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR----------P----------------- 396 (430)
Q Consensus 358 --------------~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~----------~----------------- 396 (430)
++.|.++.|++. .+ ...+..+.+.+...++.+. |
T Consensus 320 ~~~~~~~~~~~~~~~~~g~ivsf~l~-~~----~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g 394 (421)
T 2ctz_A 320 PHHPHHDRAQKYFKGKPGAVLTFGLK-GG----YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAG 394 (421)
T ss_dssp TTCTTHHHHHHHHTTCCCSEEEEEET-TH----HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHT
T ss_pred CCCCCHHHHHHhccCCCceEEEEEeC-CC----HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcC
Confidence 467889999987 41 1113455555543332211 1
Q ss_pred -cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 397 -IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 397 -~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
..+.+|++++. ++++++++.|++++
T Consensus 395 ~~~~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 395 VSPEMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp CCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred CCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence 02689998775 46777777777664
No 202
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.86 E-value=1.9e-20 Score=187.70 Aligned_cols=352 Identities=12% Similarity=0.035 Sum_probs=201.4
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH-HhhcCC-----CCCeEEEcCCchHHHHH
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL-SSLTQY-----KLGHCFYGSDGASAVEV 109 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~-----~~~~v~~~~sgteA~~~ 109 (430)
++||..| ..++.+|.+.+++.+.+.. ..+..+.+..++.+++++.+ .+.... ++++|++|+|+++|+..
T Consensus 106 ~i~l~~g----~~~~~~~~~~~al~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~ 180 (546)
T 2zy4_A 106 SLSYVRD----QLGLDPAAFLHEMVDGILG-CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAY 180 (546)
T ss_dssp HHHHHHH----TSCCCHHHHHHHHHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHH
T ss_pred hhecccC----CCCCCChHHHHHHHHhhhc-CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHH
Confidence 4555444 4467778888888877643 22222234456666766654 333211 34799999999999999
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC--CCCCCCCChhHHHHHH
Q psy14484 110 ALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS--RNINKGNSANEIARCA 187 (430)
Q Consensus 110 al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d 187 (430)
+++++..... . .+++.|++.+|+|+++......... ....+.++.+.. +.. |
T Consensus 181 ~~~~l~~~~l-~--~~Gd~Vlv~~P~y~~~~~~~~~~~~-----------g~~~~~v~~~~~~~~~~------------d 234 (546)
T 2zy4_A 181 IFESLKLNGL-L--KAGDKVAIGMPVFTPYIEIPELAQY-----------ALEEVAINADPSLNWQY------------P 234 (546)
T ss_dssp HHHHHHHTTS-S--CTTCEEEEEESCCHHHHHHHHSTTS-----------CCEEEEEECBGGGTTBC------------C
T ss_pred HHHHhhhhhc-C--CCCCEEEEeCCCCccHHHHHHHcCC-----------CcEEEEEecCcccCCCC------------C
Confidence 9987521000 0 1567899999999987554322110 011223332211 111 7
Q ss_pred HHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH--HhcCCEEEEeccccCCCCcccccccccCCCCCc
Q psy14484 188 IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC--NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265 (430)
Q Consensus 188 ~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~--~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d 265 (430)
+++|++++. .+++++++.. ++|++| ...+.+.+++|.++| +++|+++|+||+|+++............+....
T Consensus 235 ~~~l~~~~~---~~~k~v~l~~-p~NPtG-~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~ 309 (546)
T 2zy4_A 235 DSELDKLKD---PAIKIFFCVN-PSNPPS-VKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLL 309 (546)
T ss_dssp HHHHGGGGS---TTEEEEEEES-SCSSSC-BCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEE
T ss_pred HHHHHHhhC---CCCeEEEEEC-CCCCCC-ccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEE
Confidence 788887663 5678777777 889998 556778899999999 889999999999998754221111111112223
Q ss_pred eeeeecccC-CCccccEEEEEcHH-HHHhhhccC-------------C----c-------------ccccccCCCCCCHH
Q psy14484 266 FLCLSKGIT-GGYLPLSLVMTTDK-IYNSIYYKN-------------N----I-------------NIFLHSHSYSGNPL 313 (430)
Q Consensus 266 ~~~~sK~l~-gG~~~ig~~~~~~~-~~~~~~~~~-------------~----~-------------~~~~~~~t~~~~~~ 313 (430)
+.+|||.++ .| +|+|+++++++ +++.+...- . + +......+.+.+.+
T Consensus 310 ~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~ 388 (546)
T 2zy4_A 310 VYSFSKYFGATG-WRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTP 388 (546)
T ss_dssp EEESTTTTTCGG-GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHH
T ss_pred EEeCccccCCCC-cceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcH
Confidence 558999997 46 89999999875 666552100 0 0 00001122344555
Q ss_pred HHHHHH--HHHHHHhh-cCHHHHHHHHHHHHHHHH-HchhcCCCeeeEeecc-eEEEEEEeecCC--ccch---------
Q psy14484 314 ACCAAL--ATLEIFNK-DNILQRISQDMKKITKAL-TSLITHPKIINFRQKG-MIWAFDVIIEDP--EQIE--------- 377 (430)
Q Consensus 314 ~~~aa~--~~l~~~~~-~~~~~~~~~~~~~l~~~l-~~l~~~~~~~~~~~~g-~~~~~~~~~~~~--~~~~--------- 377 (430)
.+.++. +....+++ +.+.+.+++.-+.-++.+ +.+. .+. ....+.+ .++++.+. .-. ....
T Consensus 389 ~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~-~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~wl~~~ 465 (546)
T 2zy4_A 389 QQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-MPP-LRDENAVDYYTLIDLQ-DVTAKLYGEAFSEWAVKQ 465 (546)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSC-CCCTTBCCSEEEEEHH-HHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCc-ccCCCCeeEEEEEEHH-HhhcccccHHHHHHhhcc
Confidence 544321 11122322 333333333322222322 2222 221 1123344 44456543 100 0000
Q ss_pred -hHHHHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 378 -TFSKKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 378 -~~a~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
.....+.+.+.++||.+.|+ .+++|+++. ..+++++++++++|++++.+.
T Consensus 466 ~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 466 SSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp CCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHH
Confidence 01234667778889999985 258999876 568999999999999988754
No 203
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.86 E-value=2.9e-19 Score=172.40 Aligned_cols=318 Identities=13% Similarity=0.098 Sum_probs=201.1
Q ss_pred cCCC--CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 47 LFGH--SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 47 ~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
+++. -+|++.+++.+++.... .+..+...++++.+++.++. +++++++||++|++.+++.++.. ..++..
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~l~~~la~~~~~--~~~i~~~sGt~a~~~al~~~~~~-~~~~~~ 78 (390)
T 3b8x_A 7 PLASSTWDDLEYKAIQSVLDSKM-----FTMGEYVKQYETQFAKTFGS--KYAVMVSSGSTANLLMIAALFFT-KKPRLK 78 (390)
T ss_dssp CSCCCCCCHHHHHHHHHHHHHTC-----CSSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTSS-SSCSCC
T ss_pred cCCCCCCCHHHHHHHHHHHHcCC-----CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHHhh-hhcCCC
Confidence 4443 36899999999887632 34467788999999999953 48899999999999999887310 001112
Q ss_pred CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 125 NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 125 ~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++.|++..++||+........+ .+..+++.+.. +.. |+++|+++++ ++++
T Consensus 79 ~g~~Vi~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~------------d~~~l~~~i~---~~~~ 130 (390)
T 3b8x_A 79 KGDEIIVPAVSWSTTYYPLQQYG-------------LRVKFVDIDINTLNI------------DIESLKEAVT---DSTK 130 (390)
T ss_dssp TTCEEEEESSSCHHHHHHHHHTT-------------CEEEEECBCTTTCSB------------CHHHHHHHCC---TTEE
T ss_pred CcCEEEECCCCcHHHHHHHHHcC-------------CEEEEEecCccccCc------------CHHHHHHHhC---cCCe
Confidence 56789999999988754433211 12234443321 222 7899999885 4677
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCc--cccE
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGY--LPLS 281 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~--~~ig 281 (430)
+|++.+ +.|...+ +++|.++|+++|+++|+||+|+ ++... ....++..+|+.++||..+.++ ...|
T Consensus 131 ~v~~~~----~~g~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~g~~~~~~~~s~~~~k~~~~g~gG 198 (390)
T 3b8x_A 131 AILTVN----LLGNPNN----FDEINKIIGGRDIILLEDNCES-MGATF---NNKCAGTFGLMGTFSSFYSNHIATMEGG 198 (390)
T ss_dssp EEEEEC----GGGCCCC----HHHHHHHHTTSCCEEEEECTTC-TTCEE---TTEETTSSSSEEEEECCTTSSSCSSSCE
T ss_pred EEEEEC----CccChhh----HHHHHHHHHHcCCEEEEECcCc-ccCEE---CCcccccccceEEEEccCCCCCccCCce
Confidence 777633 2243444 9999999999999999999998 22211 1234566789999886433210 1347
Q ss_pred EEEEcH-HHHHhhhc---cCCccc-------------------cc---ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHH
Q psy14484 282 LVMTTD-KIYNSIYY---KNNINI-------------------FL---HSHSYSGNPLACCAALATLEIFNKDNILQRIS 335 (430)
Q Consensus 282 ~~~~~~-~~~~~~~~---~~~~~~-------------------~~---~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~ 335 (430)
++++++ ++.+.+.. .+..+. +. .+.++..+++.++++.+.|+.++ +..++.+
T Consensus 199 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~~ 276 (390)
T 3b8x_A 199 CIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP--RFISVRR 276 (390)
T ss_dssp EEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH--HHHHHHH
Confidence 788775 55543322 110000 00 12233366777777777776553 5677788
Q ss_pred HHHHHHHHHHHchhcCCCeeeEe--ecceE--EEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-------C------
Q psy14484 336 QDMKKITKALTSLITHPKIINFR--QKGMI--WAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-------G------ 398 (430)
Q Consensus 336 ~~~~~l~~~l~~l~~~~~~~~~~--~~g~~--~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-------~------ 398 (430)
++.+++.+.|+++ +.+.-.. ....+ +.+.+. .... .. ...+.+.|.++||.+.+. .
T Consensus 277 ~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~i~~~-~~~~-~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~ 349 (390)
T 3b8x_A 277 KNAEYFLDKFKDH---PYLDVQQETGESSWFGFSFIIK-KDSG-VI--RKQLVENLNSAGIECRPIVTGNFLKNTDVLKY 349 (390)
T ss_dssp HHHHHHHHHHTTC---SSEEECCCCSBCCCCEEEEEEC-TTSC-CC--HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTT
T ss_pred HHHHHHHHHhcCC---CCcccCCCCCCcccEEEEEEec-CcCc-cc--HHHHHHHHHHCCCCeeeecCCchhhcchhhhc
Confidence 8888888888764 2221111 12333 333443 2100 11 367889999999987641 1
Q ss_pred -----------------CEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 399 -----------------NTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 399 -----------------~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
+.+|++++..+|++|++.+++.|
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 350 FDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 25899999999999999999876
No 204
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.86 E-value=9.1e-20 Score=178.63 Aligned_cols=318 Identities=16% Similarity=0.092 Sum_probs=195.9
Q ss_pred CHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhc-CCCCCcEEE
Q psy14484 52 NSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNK-GFLNKKKFI 130 (430)
Q Consensus 52 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~-g~~~~~~vl 130 (430)
+|++.+++.+++.... .++.+...++++.+++.++. +++++++||++|++.+++++..+...+ ...+++.|+
T Consensus 42 ~~~~~~a~~~~~~~~~-----~~~~~~~~~l~~~la~~~g~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi 114 (437)
T 3bb8_A 42 GTKELQLMVEASLDGW-----LTTGRFNDAFEKKLGEYLGV--PYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVI 114 (437)
T ss_dssp CHHHHHHHHHHHHHCC-----CBSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEE
T ss_pred CHHHHHHHHHHHHcCC-----cCCChHHHHHHHHHHHHHCC--CcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEE
Confidence 5899999998886532 34456788999999999953 489999999999999998873110000 001457899
Q ss_pred EEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Q psy14484 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209 (430)
Q Consensus 131 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 209 (430)
+..++|++........+ .....++.+. ++.. |+++|+++++ +++++|++..
T Consensus 115 ~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~~------------d~~~l~~~i~---~~~~~v~~~~ 166 (437)
T 3bb8_A 115 TVAAGFPTTVNPTIQNG-------------LIPVFVDVDIPTYNV------------NASLIEAAVS---DKTKAIMIAH 166 (437)
T ss_dssp ECSSSCHHHHHHHHHTT-------------CEEEECCEETTTTEE------------CGGGHHHHCC---TTEEEEEEEC
T ss_pred ECCCCcHHHHHHHHHcC-------------CEEEEEeccCccCCc------------CHHHHHHhcC---CCCeEEEEeC
Confidence 99999987754433211 1223333221 1221 6788888885 4677777642
Q ss_pred ccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee----cccCCCccccEEEE
Q psy14484 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS----KGITGGYLPLSLVM 284 (430)
Q Consensus 210 ~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s----K~l~gG~~~ig~~~ 284 (430)
+.|...+ +++|.++|+++|+++|+||+|+ |....+ ...+..+|++++| |.+++| +.|+++
T Consensus 167 ----~~g~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~~d~~~~s~~~~k~l~~g--~gg~~~ 231 (437)
T 3bb8_A 167 ----TLGNLFD----LAEVRRVADKYNLWLIEDCCDALGSTYDG-----KMAGTFGDIGTVSFYPAKHITMG--EGGAVF 231 (437)
T ss_dssp ----GGGCCCC----HHHHHHHHHHHTCEEEEECTTCTTCEETT-----EETTSSSSEEEEECSTTSSSCCS--SCEEEE
T ss_pred ----CCCChhc----HHHHHHHHHHcCCEEEEECccccCceECC-----eecccccCEEEEECcCCcCCCCC--CeEEEE
Confidence 1233344 9999999999999999999998 332211 2234346876543 667554 678888
Q ss_pred EcHHHHHhh----hccCCc---------------------c--cc-------cccCCCCCCHHHHHHHHHHHHHHhhcCH
Q psy14484 285 TTDKIYNSI----YYKNNI---------------------N--IF-------LHSHSYSGNPLACCAALATLEIFNKDNI 330 (430)
Q Consensus 285 ~~~~~~~~~----~~~~~~---------------------~--~~-------~~~~t~~~~~~~~~aa~~~l~~~~~~~~ 330 (430)
++++.+..+ ...+.. . .+ ..+..+..+++.++++.+.|+.+ +++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~--~~~ 309 (437)
T 3bb8_A 232 TQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERI--EEF 309 (437)
T ss_dssp ESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHH--HHH
T ss_pred eCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHH--HHH
Confidence 885543322 110100 0 00 01112233577777777777654 345
Q ss_pred HHHHHHHHHHHHHHHHchhcCCCeee-----EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC-------
Q psy14484 331 LQRISQDMKKITKALTSLITHPKIIN-----FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG------- 398 (430)
Q Consensus 331 ~~~~~~~~~~l~~~l~~l~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~------- 398 (430)
.++.+++.+++.+.|+++.....+.. .++...+ .+.+. .... .. ...+.+.|.++||.++++.
T Consensus 310 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~--~~~l~~~L~~~GI~v~~~~~~~~~~~ 384 (437)
T 3bb8_A 310 VEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGF-PITLK-EDSG-VS--RIDLVKFLDEAKVGTRLLFAGNLTRQ 384 (437)
T ss_dssp HHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSE-EEEEC-GGGS-SC--HHHHHHHHHHTTBCCBCCTTSSGGGS
T ss_pred HHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEE-EEEEC-CcCc-Cc--HHHHHHHHHHCCCceeccCCcccccC
Confidence 66667888888888877622111110 0111122 22232 1100 01 3679999999999876431
Q ss_pred ----------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 399 ----------------------NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 399 ----------------------~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
+.+|++++..+|++|++.++++|++++.
T Consensus 385 p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 385 PYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp GGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred chhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 1489999999999999999999988764
No 205
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.85 E-value=1.9e-19 Score=173.98 Aligned_cols=349 Identities=10% Similarity=-0.003 Sum_probs=205.0
Q ss_pred CCCEEEecccccccccCCCCC--HHHHHHHHHHHhhc-cc-cccCCCCCHHHHHHHHHHHhhcCCCCC--eEEEcCCchH
Q psy14484 32 SGKRYLDAISSWWVNLFGHSN--SYINKALKNQLNKL-EH-VMLSNLTHKPVIKLSEKLSSLTQYKLG--HCFYGSDGAS 105 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~--p~v~~a~~~~~~~~-~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgte 105 (430)
|++..+|+.-|..-..-|..+ |.|++|.+..++.. .+ +....+..++.+.+++.+.... ...+ ...-|.|||.
T Consensus 42 d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~-~~~~~~~~~qt~ggtg 120 (420)
T 4h51_A 42 AKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNT-VELENLVAVQTLSGTG 120 (420)
T ss_dssp CCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC----CGGGEEEEEEEHHHH
T ss_pred CCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCC-ccccccceeeecCchH
Confidence 333457766654444555433 77888877666543 22 2222333344455555443221 1222 3455889999
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC-C-CCCCCCCCCChhHH
Q psy14484 106 AVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT-P-DSRNINKGNSANEI 183 (430)
Q Consensus 106 A~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 183 (430)
|...++.++..... .+++.|++.+|+|..+.......+..+. ...++ + ....
T Consensus 121 a~~~a~~~l~~~~~----~pgd~V~ip~P~w~~y~~i~~~aG~~~V------------~~~~~~~~~~~~---------- 174 (420)
T 4h51_A 121 AVSLGAKLLTRVFD----AETTPIYLSDPTWPNHYGVVKAAGWKNI------------CTYAYYDPKTVS---------- 174 (420)
T ss_dssp HHHHHHHHHTTTSC----TTTSCEEEEESCCTHHHHHHHHTTCCCE------------EEEECEEGGGTE----------
T ss_pred HHHHHHHHHHHhcC----CCCCEEEEecCCchhHHHHHHHcCCeEE------------EeeccccccccC----------
Confidence 99998887765321 1567899999999877554444333211 11111 1 1011
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc---cccc-cc
Q psy14484 184 ARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK---FFAC-EH 259 (430)
Q Consensus 184 ~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~---~~~~-~~ 259 (430)
.|.+.+.+.+...++++.+++..+ .+|++| ..++.+.+++|.++|+++++++|.||+|.+|...+. .+.. ..
T Consensus 175 --~d~~~~~~~l~~~~~~~~vll~~~-p~NPtG-~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~ 250 (420)
T 4h51_A 175 --LNFEGMKKDILAAPDGSVFILHQC-AHNPTG-VDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLF 250 (420)
T ss_dssp --ECHHHHHHHHHHSCSSCEEEEESS-SCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred --CCHHHHHHHHhccCCCcEEEEeCC-CCCCCC-CCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhH
Confidence 166777777777667778888888 899999 778999999999999999999999999999865332 1111 11
Q ss_pred CCCCCc---eeeeecccCC-CccccEEEEEcHHHHHhhhcc-CCcccccccCCCCCCHHHHHHHHHHHHH--H----h--
Q psy14484 260 AEIWPD---FLCLSKGITG-GYLPLSLVMTTDKIYNSIYYK-NNINIFLHSHSYSGNPLACCAALATLEI--F----N-- 326 (430)
Q Consensus 260 ~~~~~d---~~~~sK~l~g-G~~~ig~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~~~aa~~~l~~--~----~-- 326 (430)
.+..+. +-+|||.++- | +|+|++.+..+..+....- ............+++..++.++...|.. + +
T Consensus 251 ~~~~~~~i~~~s~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~ 329 (420)
T 4h51_A 251 ARRGIEVLLAQSFSKNMGLYS-ERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAE 329 (420)
T ss_dssp HHTTCCCEEEEECTTTSCCGG-GCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HhhCceEEEEecccccccccc-CceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHH
Confidence 111222 3379998765 5 8999998865433321110 0000011223333444555555444431 1 1
Q ss_pred hcCHHHHHHHHHHHHHHHHHchhcCCC-eee-EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecCCEEEEe
Q psy14484 327 KDNILQRISQDMKKITKALTSLITHPK-IIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLM 404 (430)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~~~lR~~ 404 (430)
.+...++++++++.+.+.|+++ ..+. +.. .+..|+|.+..+. .+.++.|.++||++.+++ ||+
T Consensus 330 ~~~m~~r~~~~R~~l~~~L~~~-g~~~~~~~i~~q~GmF~~~gls-----------~e~v~~L~e~~Vy~~~~g---Ris 394 (420)
T 4h51_A 330 LSAMAERIRTMRRTVYDELLRL-QTPGSWEHVINQIGMFSFLGLS-----------KAQCEYCQNHNIFITVSG---RAN 394 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCSSCCTHHHHCCSSEEECCCC-----------HHHHHHHHHTTEECCTTC---EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCCCCCeecCCCceEEecCcC-----------HHHHHHHHhCCEEEcCCC---EEE
Confidence 1234455666677777777665 2222 222 2345665443332 234567889999888765 887
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 405 PPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 405 ~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
++ ..++++|+.+.++|.++++++
T Consensus 395 ~A-gl~~~ni~~~a~aI~~vvr~i 417 (420)
T 4h51_A 395 MA-GLTHETALMLAQTINDAVRNV 417 (420)
T ss_dssp GG-GCCHHHHHHHHHHHHHHHC--
T ss_pred ec-cCCHHHHHHHHHHHHHHHHHh
Confidence 65 578999999999999998765
No 206
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.85 E-value=4.1e-19 Score=176.68 Aligned_cols=333 Identities=9% Similarity=0.004 Sum_probs=202.0
Q ss_pred CCHHHHHHHHHHHhhcccc-ccCCCCCHHHHHHHHHHHhhcCCC--CCe---EEEcCCchHHHHHHHHHHHHhhhh----
Q psy14484 51 SNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKLSSLTQYK--LGH---CFYGSDGASAVEVALKMSFHYWYN---- 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~--~~~---v~~~~sgteA~~~al~~~~~~~~~---- 120 (430)
.+|.+.+++.+.+...... .......+...+++++++++++.. +++ ..+++||++|+..++.+++.....
T Consensus 68 ~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~ 147 (502)
T 3hbx_A 68 MEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (502)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHh
Confidence 5789999988876542211 111112345567888899998765 333 346999999999998877653221
Q ss_pred cCCC-CCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhC
Q psy14484 121 KGFL-NKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKN 198 (430)
Q Consensus 121 ~g~~-~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~ 198 (430)
.|.+ .++.|++.++++. ......... ..+...++.+.. +.. |+++|+++++
T Consensus 148 ~G~~~~~~~vi~~~~~h~-s~~~~~~~~------------G~~~~~v~~~~~~~~~------------d~~~l~~~i~-- 200 (502)
T 3hbx_A 148 EGKPVDKPNIVTGANVQV-CWEKFARYF------------EVELKEVKLSEGYYVM------------DPQQAVDMVD-- 200 (502)
T ss_dssp TTCCCSCCEEEEETTCCH-HHHHHHHHT------------TCEEEEECCBTTBCSC------------CHHHHHHHCC--
T ss_pred cCCCCCCcEEEEcCCchH-HHHHHHHHc------------CceeEEEecCCCcCcC------------CHHHHHHHHh--
Confidence 1322 2236666555543 322222211 223455554432 222 8899999886
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhc------CCEEEEeccccCCCC---ccc-ccccccCCCCCceee
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY------NIHLIADEIAVGCGR---TGK-FFACEHAEIWPDFLC 268 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~------gi~li~DEv~~g~g~---~g~-~~~~~~~~~~~d~~~ 268 (430)
+++.+|++.. +++++|.+.+ +++|.++|+++ |+++|+|++|.++.. .+. .+.+. ....|.++
T Consensus 201 -~~t~~v~~~~-~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~--~~~~D~v~ 272 (502)
T 3hbx_A 201 -ENTICVAAIL-GSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR--LPLVKSIN 272 (502)
T ss_dssp -TTEEEEEEEB-SCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT--STTEEEEE
T ss_pred -hCCEEEEEec-CCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC--CCCceEEE
Confidence 4678888877 8888898887 99999999999 999999999986531 111 11111 11356665
Q ss_pred ee--cccCCCccccEEEEEcH-HHH-Hhhhcc-----CCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHH
Q psy14484 269 LS--KGITGGYLPLSLVMTTD-KIY-NSIYYK-----NNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQ 336 (430)
Q Consensus 269 ~s--K~l~gG~~~ig~~~~~~-~~~-~~~~~~-----~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~ 336 (430)
++ |.+.++ .++|+++.+. +.. +.+... +....+ ...++.......+..++++.+.. .+..++..+
T Consensus 273 ~s~hK~l~~p-~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~--~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~ 349 (502)
T 3hbx_A 273 VSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTF--TLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRE 349 (502)
T ss_dssp EETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECSSSSCEEEC--CSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccCCC-CCeEEEEEeCHHHhhHHhccCcccccCCCCCc--cccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 766555 5789888764 333 222110 000000 00111122233344445554433 344566677
Q ss_pred HHHHHHHHHHchhcCCCeeeEe--ecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------CCEEEEeCC
Q psy14484 337 DMKKITKALTSLITHPKIINFR--QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------GNTVYLMPP 406 (430)
Q Consensus 337 ~~~~l~~~l~~l~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------~~~lR~~~~ 406 (430)
+++++.+.|+++ +.+..+. ....++.|.+. .+.... ...+.+.|.++|+++... ...+||++.
T Consensus 350 ~a~~l~~~L~~~---~~~~~~~~~~~~~~v~f~~~-~~~~~~---~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~ 422 (502)
T 3hbx_A 350 NMIVLREGLEKT---ERFNIVSKDEGVPLVAFSLK-DSSCHT---EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR 422 (502)
T ss_dssp HHHHHHHHHHTT---TCEEECSCSSSSSEEEEEES-SCSSCC---HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred HHHHHHHHHHhC---CCEEEEeCCCCceEEEEEec-CCCcCC---HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence 788888888765 3222221 34567777776 422111 247999999999986432 147999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHh
Q psy14484 407 YILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 407 ~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
..+|+++++.+++.|++++.++
T Consensus 423 ~~~t~edid~li~~L~~~l~~l 444 (502)
T 3hbx_A 423 EDFSRTLAERLVIDIEKVMREL 444 (502)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998765
No 207
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.84 E-value=2.4e-19 Score=176.46 Aligned_cols=290 Identities=11% Similarity=0.044 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCch-HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGA-SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgt-eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
+..++++++++++++.+.+ ++|++||| .++..++..++... +++.||+.++ .|..........
T Consensus 133 ~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~------~~~~vi~~~~-~h~s~~~~~~~~-------- 196 (456)
T 2z67_A 133 ALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKY------GSNVVIYPYA-SHKSPIKAVSFV-------- 196 (456)
T ss_dssp HHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHH------CCCEEEEECC-CCHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhc------CCCEEEEECC-CcHHHHHHHHHc--------
Confidence 4556788999999976655 99999999 46666777665421 3455666666 444432222211
Q ss_pred hhccCCCeeEeCC---CCCCCCCCCCChhHHHHHHHHHHHHHH-HhC-CCCeEEEEEccccccCCCcccCChHHHHHHHH
Q psy14484 156 YTSLLNKTYIITT---PDSRNINKGNSANEIARCAIFDLEILL-KKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVRE 230 (430)
Q Consensus 156 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~le~~l-~~~-~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~ 230 (430)
..+...++. +..+.. |+++|++++ +.. ..++.+|++.. .++++|.+.+ +++|.+
T Consensus 197 ----G~~~~~v~~~~~~~~~~~------------d~~~l~~~i~~~~~~~~~~~vv~~~-~nn~tG~i~~----l~~I~~ 255 (456)
T 2z67_A 197 ----GMNMRLVETVLDGDRVYV------------PVEDIENAIKKEIELGNRPCVLSTL-TFFPPRNSDD----IVEIAK 255 (456)
T ss_dssp ----TCEEEEECCEEETTEEEC------------CHHHHHHHHHHHHHTTCCEEEEEES-SCCTTBCCCC----HHHHHH
T ss_pred ----CCCceEEEEeccCCCCCc------------CHHHHHHHHHHHhhCCCeEEEEEeC-CCCCCCCcCC----HHHHHH
Confidence 122233333 222222 889999999 421 13567776666 7778898887 999999
Q ss_pred HHHhcCCEEEEeccccCCCCccc-cccccc-CCCCCceeee--ecccCCCccccEEEEE-cHHHHHhhhccCCccccccc
Q psy14484 231 ICNNYNIHLIADEIAVGCGRTGK-FFACEH-AEIWPDFLCL--SKGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFLHS 305 (430)
Q Consensus 231 l~~~~gi~li~DEv~~g~g~~g~-~~~~~~-~~~~~d~~~~--sK~l~gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (430)
+|+++|+++|+||+|.++.. |. ...... .+ .+|++++ +|.++++ .++|++++ ++++.+.+.+ ...+
T Consensus 256 la~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~------~~~g 326 (456)
T 2z67_A 256 ICENYDIPHIINGAYAIQNN-YYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISL------SYPG 326 (456)
T ss_dssp HHHHHTCCEEEECTTTTTCH-HHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHT------TSCS
T ss_pred HHHHcCCcEEEECcchHHHH-HhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCc------CCCC
Confidence 99999999999999875532 21 111111 12 5787766 5876666 68999999 4677766643 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchh---cCCCeeeEeecceEEEEEEeecCCccchhH
Q psy14484 306 HSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLI---THPKIINFRQKGMIWAFDVIIEDPEQIETF 379 (430)
Q Consensus 306 ~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 379 (430)
...+++ ..+..+++..+.. ++..++..++.+++.+.|+++. ..... .+. .++.+.+. .+. .
T Consensus 327 -~~~~~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~---~~~-~~v~~~~~-~~~--~--- 393 (456)
T 2z67_A 327 -RASATP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFL---DVE-SPIASCIS-VNS--D--- 393 (456)
T ss_dssp -CBCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBC---CCC-CSSEEEEE-CSS--C---
T ss_pred -CCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEec---CCC-CeEEEEEe-ccc--H---
Confidence 112222 2233333433322 3456778888899999998763 32221 122 45555553 211 1
Q ss_pred HHHHHHHHHHCCc---EEe------------e-cCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNEL---LLR------------P-IGNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 380 a~~~~~~l~~~Gv---~~~------------~-~~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
...+.+.|.++|+ .+. . ..+++|++++..+|++++++++++|++++
T Consensus 394 ~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 394 PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 2468888988875 333 1 13689999999999999999999998754
No 208
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.83 E-value=3.7e-20 Score=181.47 Aligned_cols=288 Identities=10% Similarity=0.041 Sum_probs=180.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccch
Q psy14484 74 LTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFK 153 (430)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~ 153 (430)
.+.....++++.+++ ++.+ +.+++++|+++|+..++++++. +++.|++..++|++........+.
T Consensus 54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~--------~gd~Vlv~~~~h~s~~~~~~~~G~----- 118 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQ--------KKGDILMARNVHKSVLHALDISQQ----- 118 (446)
T ss_dssp SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTT--------SSSCEEECTTCCHHHHHHHHHHTC-----
T ss_pred CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcC--------CCCEEEEecCccHHHHHHHHHcCC-----
Confidence 345567889999999 8754 6789999999999999998754 678899988888766443332221
Q ss_pred hhhhccCCCeeEeCC--CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 154 EIYTSLLNKTYIITT--PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 154 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
..++++. +..+.... ..|+++| +. ++++++++++ .++ +|.+.+ +++|.++
T Consensus 119 --------~~~~v~~~~~~~~~~~~--------~~d~~~l---~~---~~~~~v~~~~-~n~-~G~~~~----l~~I~~l 170 (446)
T 2x3l_A 119 --------EGHFIETHQSPLTNHYN--------KVNLSRL---NN---DGHKLVVLTY-PNY-YGETFN----VEEVIKS 170 (446)
T ss_dssp --------CEEECEEEECTTTSSEE--------EEEC-------------CCEEEEES-SCT-TSCCCC----HHHHHHH
T ss_pred --------eEEEEeCeeccccCcCC--------CCCHHHH---cC---CCceEEEEEC-CCC-CeEecC----HHHHHHH
Confidence 1122222 11100000 0144555 22 3566677666 544 787776 9999999
Q ss_pred HHhcCCEEEEeccccC-CCCcccccccccCCCCCceeeee--cccCCCccccEEEEEcHHHHH--hhhccCCcccccccC
Q psy14484 232 CNNYNIHLIADEIAVG-CGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDKIYN--SIYYKNNINIFLHSH 306 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g-~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~--~~~~~~~~~~~~~~~ 306 (430)
|++||+++|+||+|++ +...+.. .......+|+++.| |.++++ .++|++++++++++ .+.. ......
T Consensus 171 ~~~~~~~livDea~~~~~~f~~~~--~~~~~~g~Di~~~S~~K~l~~~-~g~g~l~~~~~~i~~~~~~~-----~~~~~~ 242 (446)
T 2x3l_A 171 LHQLNIPVLIDEAHGAHFGLQGFP--DSTLNYQADYVVQSFHKTLPAL-TMGSVLYIHKNAPYRENIIE-----YLSYFQ 242 (446)
T ss_dssp HHHTTCCEEEECTTCTTTTSTTSC--CCGGGGTCSEEEECHHHHSSSC-TTCEEEEEETTCTTHHHHHH-----HHHHHS
T ss_pred HHhcCCeEEEcchhhhhhccCCCC--CChHHcCCCEEEECCccccccc-cccEEEEEcCCcCCHHHHHH-----HHHHHc
Confidence 9999999999999985 2222221 12222346888766 988776 57899999887644 2221 011122
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHH
Q psy14484 307 SYSGNPLACCAALATLEIFNKDN---ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKF 383 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~ 383 (430)
+.+.+...+++..++++.++... +.++.+++.+++++. .+ ..+. ...+..+++.+. . . . +.++
T Consensus 243 ~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~--g~---~~~~--~~~~~~l~i~~~-~-~--~---~~~l 308 (446)
T 2x3l_A 243 TSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK--GF---EMLQ--VDDPLKLLIKYE-G-F--T---GHDI 308 (446)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--TC---EEEE--CSSTTEEEEECT-T-S--C---HHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc--CC---EECc--CCCCeEEEEEeC-C-c--C---HHHH
Confidence 33446665555555666665422 566677777776665 11 1111 112334445443 1 1 1 3578
Q ss_pred HHHHHHCCcEEe-ecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 384 FVAALKNELLLR-PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 384 ~~~l~~~Gv~~~-~~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.+.|.++||.+. ++.+.+|++++..+|++++ +++++|++++++
T Consensus 309 ~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 309 QNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp HHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred HHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHh
Confidence 899999999998 5558899999999999999 999999988753
No 209
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.83 E-value=1.9e-18 Score=172.18 Aligned_cols=318 Identities=11% Similarity=0.057 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhcCCC--CCeEEEcCCchHHHHHHHHHHHHhh----hhcCCC--CCcEEEEEcCCCCCcchhhhccCC
Q psy14484 77 KPVIKLSEKLSSLTQYK--LGHCFYGSDGASAVEVALKMSFHYW----YNKGFL--NKKKFICLQNSYHGETLGALAVTN 148 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~--~~~v~~~~sgteA~~~al~~~~~~~----~~~g~~--~~~~vl~~~~~yhg~~~~~~~~~~ 148 (430)
....+++++++++++.. .+.++|++|||+|+..|+.+++... ...|.+ ++..|++ +...|.+...+....+
T Consensus 135 ~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~-s~~~H~s~~~~~~~~g 213 (511)
T 3vp6_A 135 LMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFT-SEQSHYSIKKAGAALG 213 (511)
T ss_dssp HHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEE-ETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEE-CCCchHHHHHHHHHcC
Confidence 45566777888888755 4589999999999999999887632 122311 2334444 4445544333332222
Q ss_pred CccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccCCCcccCChHHH
Q psy14484 149 IQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCAGGMIMYDSIYL 225 (430)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~~G~~~~~~~~l 225 (430)
.. ......++.+..++. |+++|+++|++. +..+++|+++. +++++|.+.+ +
T Consensus 214 ~g---------~~~~~~v~~d~~~~~------------d~~~Le~~i~~~~~~g~~~~~vv~~~-~~~~~G~vd~----l 267 (511)
T 3vp6_A 214 FG---------TDNVILIKCNERGKI------------IPADFEAKILEAKQKGYVPFYVNATA-GTTVYGAFDP----I 267 (511)
T ss_dssp SC---------GGGEEEECBCTTSCB------------CHHHHHHHHHHHHHTTCEEEEEEEEB-SCSSSCCBCC----H
T ss_pred CC---------CCcEEEeecCCCCcc------------CHHHHHHHHHHHHhcCCCcEEEEEec-CCCCCccccc----H
Confidence 10 002345554443333 899999999753 12378888888 8999998877 9
Q ss_pred HHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH-HHHhhhccCCccc
Q psy14484 226 KLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK-IYNSIYYKNNINI 301 (430)
Q Consensus 226 ~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~-~~~~~~~~~~~~~ 301 (430)
++|.++|++||+++|+|++|.+.......+.....++ ..|.++++ |.+++. ..+|+++++.+ +....... ....
T Consensus 268 ~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~-~~~y 345 (511)
T 3vp6_A 268 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQM-HASY 345 (511)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCC-CCTT
T ss_pred HHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhcc-CCcc
Confidence 9999999999999999999985422111111112233 35777654 887765 46788888653 44332210 0000
Q ss_pred ccc----------------cCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecce
Q psy14484 302 FLH----------------SHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGM 362 (430)
Q Consensus 302 ~~~----------------~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~ 362 (430)
+.. ..+.....+. ..++++.+.. ++..++..++++++.+.|+++.++..+....+...
T Consensus 346 l~~~~~~~~~~~~~~~~~~~~~r~~~al~---~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~ 422 (511)
T 3vp6_A 346 LFQQDKHYDVSYDTGDKAIQCGRHVDIFK---FWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHT 422 (511)
T ss_dssp TCCSSCSSCGGGCCGGGSSCSSCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSS
T ss_pred ccCcccccccccCccCCCCCCCCchHHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeE
Confidence 000 0011122333 3344443332 45567778888888888876522211111023445
Q ss_pred EEEEEEeecCCc----cc-------hhHHHHHHHHHHHCCcEEee----cC--CEEEEeC-CCCCCHHHHHHHHHHHHHH
Q psy14484 363 IWAFDVIIEDPE----QI-------ETFSKKFFVAALKNELLLRP----IG--NTVYLMP-PYILNKNEIQHMTSAIFQT 424 (430)
Q Consensus 363 ~~~~~~~~~~~~----~~-------~~~a~~~~~~l~~~Gv~~~~----~~--~~lR~~~-~~~~t~e~i~~~~~~l~~~ 424 (430)
++.|.+. +... .. .....++.+.|.++|+++.. .+ +.+|+++ +..+++++|+.+++.|++.
T Consensus 423 ~v~f~~~-p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 423 NVCFWYI-PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL 501 (511)
T ss_dssp CEEEEEC-CGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEe-CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 5566553 2110 00 01134688899999965432 12 3699998 7889999999999999887
Q ss_pred HHH
Q psy14484 425 FNE 427 (430)
Q Consensus 425 l~~ 427 (430)
-++
T Consensus 502 ~~~ 504 (511)
T 3vp6_A 502 GQD 504 (511)
T ss_dssp HC-
T ss_pred HHh
Confidence 544
No 210
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.82 E-value=5.1e-18 Score=167.97 Aligned_cols=313 Identities=10% Similarity=0.008 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHhhcCCCC----------CeEEEcCCchHHHHHHHHHHHHhhhhc----CC-------CCCcEEEEEcCC
Q psy14484 77 KPVIKLSEKLSSLTQYKL----------GHCFYGSDGASAVEVALKMSFHYWYNK----GF-------LNKKKFICLQNS 135 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~----------~~v~~~~sgteA~~~al~~~~~~~~~~----g~-------~~~~~vl~~~~~ 135 (430)
+...++.++++++++.+. ...+|++|||+||..|+.+++.....+ |. .++. +|+.+..
T Consensus 118 ~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~-~v~~s~~ 196 (481)
T 4e1o_A 118 ELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARL-VAYASDQ 196 (481)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTE-EEEEETT
T ss_pred HHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCe-EEEEcCc
Confidence 455667778888876432 267999999999999999988643211 10 0233 4444555
Q ss_pred CCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccc
Q psy14484 136 YHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQ 212 (430)
Q Consensus 136 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~ 212 (430)
.|.+...+....+ ...+.++.+..++. |+++|+++|++. ...+.+|++.. ++
T Consensus 197 ~H~s~~~~~~~~g------------~~~~~v~~~~~~~~------------d~~~Le~~i~~~~~~g~~~~~vv~~~-~~ 251 (481)
T 4e1o_A 197 AHSSVEKAGLISL------------VKMKFLPVDDNFSL------------RGEALQKAIEEDKQRGLVPVFVCATL-GT 251 (481)
T ss_dssp SCHHHHHHHHHHT------------CEEEEECCCTTSCC------------CHHHHHHHHHHHHHTTCEEEEEEEEB-SC
T ss_pred chHHHHHHHHhCC------------CceEEEEcCCCCcC------------CHHHHHHHHHHHHhCCCCcEEEEEec-CC
Confidence 5554333222222 23355555443333 899999999753 11266677777 77
Q ss_pred cCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH-
Q psy14484 213 CAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK- 288 (430)
Q Consensus 213 ~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~- 288 (430)
+++|.+.| +++|.++|++||+++|+|++|.+.......+.....++ ..|.++++ |.++.. ..+|+++++++
T Consensus 252 t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~ 326 (481)
T 4e1o_A 252 TGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKY 326 (481)
T ss_dssp TTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHH
T ss_pred CCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHH
Confidence 88898877 99999999999999999999985422222111111233 35777764 888765 46788888754
Q ss_pred HHH-hhhccCCccccc--------------ccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCC
Q psy14484 289 IYN-SIYYKNNINIFL--------------HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPK 353 (430)
Q Consensus 289 ~~~-~~~~~~~~~~~~--------------~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 353 (430)
+.. .+.. ....+. ...+.....+.+.+++..+..-.-++..++..++++++.+.|+++..+..
T Consensus 327 ~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 404 (481)
T 4e1o_A 327 KLQQTFSV--NPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEI 404 (481)
T ss_dssp HHHTTTCC--CCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEC
T ss_pred HHHHHhcC--CchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 322 2211 000000 00111112333333333332111134566777888888888876532222
Q ss_pred eeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCc-EEeec---C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q psy14484 354 IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNEL-LLRPI---G-NTVYLMPP-YILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv-~~~~~---~-~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+ .+....++.+.+. .. .....++.++|.++|+ ++.+. + ..+|+++. ..+|+++|++++++|++++++
T Consensus 405 ~--~~~~~~~v~f~~~-~~----~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 405 P--AKRHLGLVVFRLK-GP----NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp C--SCCCSSEEEEEES-SC----HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred e--cCCceeEEEEEeC-Cc----hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1234456666665 31 2234678999998884 44442 2 57899866 445899999999999999988
Q ss_pred hh
Q psy14484 428 VI 429 (430)
Q Consensus 428 ~~ 429 (430)
++
T Consensus 478 l~ 479 (481)
T 4e1o_A 478 IL 479 (481)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.82 E-value=4e-19 Score=172.10 Aligned_cols=291 Identities=11% Similarity=0.063 Sum_probs=184.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCcc
Q psy14484 72 SNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS 151 (430)
Q Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~ 151 (430)
..+..+..+++++.++++.+ .+.+++++||++|+..+++.+.. +++.||+.++.|++........
T Consensus 77 ~r~~~p~~~~le~~lA~l~g--~~~~i~~ssGt~Ai~~al~~l~~--------~Gd~Vi~~~~~y~~~~~~~~~~----- 141 (415)
T 2fq6_A 77 GRRGTLTHFSLQQAMCELEG--GAGCVLFPCGAAAVANSILAFIE--------QGDHVLMTNTAYEPSQDFCSKI----- 141 (415)
T ss_dssp TTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHTTCC--------TTCEEEEETTSCHHHHHHHHHT-----
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHHhC--------CCCEEEEeCCCchHHHHHHHHH-----
Confidence 35677888999999999985 35677889999999999886543 5678999999888653221110
Q ss_pred chhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
......++.+++.. |+++|+++++ +++++|+++. ++|++|.+.+ +++|.++
T Consensus 142 ----l~~~G~~v~~v~~~-----------------d~~~le~ai~---~~tklV~~e~-~~NptG~v~d----l~~I~~l 192 (415)
T 2fq6_A 142 ----LSKLGVTTSWFDPL-----------------IGADIVKHLQ---PNTKIVFLES-PGSITMEVHD----VPAIVAA 192 (415)
T ss_dssp ----GGGGTCEEEEECTT-----------------CGGGGGGGCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHH
T ss_pred ----HHHcCcEEEEECCC-----------------CHHHHHHhhc---cCCcEEEEEC-CCCCCCEeec----HHHHHHH
Confidence 11112233444332 6788888885 4689999999 9999998887 9999999
Q ss_pred HHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCc-cccEEEEEcHHHHHhhhccCCcccccccC
Q psy14484 232 CNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGY-LPLSLVMTTDKIYNSIYYKNNINIFLHSH 306 (430)
Q Consensus 232 ~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~-~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (430)
|++ +|+++|+|++|+.. ...... ....|++ +++|.++++. ..+|++++++++++.+... ....+
T Consensus 193 a~~~~~g~~livD~a~a~~-~~~~p~-----~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~-----~~~~G 261 (415)
T 2fq6_A 193 VRSVVPDAIIMIDNTWAAG-VLFKAL-----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLREN-----AYLMG 261 (415)
T ss_dssp HHHHCTTCEEEEECTTTTT-TSSCGG-----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHH-----HHHTT
T ss_pred HHhhcCCCEEEEECCCccc-ccCCcc-----ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHH-----HHhcC
Confidence 999 99999999998732 111111 2346777 5679998742 2368999988877766540 01111
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc-----CCCeee----------EeecceEEEEEEeec
Q psy14484 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-----HPKIIN----------FRQKGMIWAFDVIIE 371 (430)
Q Consensus 307 t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~~----------~~~~g~~~~~~~~~~ 371 (430)
+ ..++..+..+...++.+. ...++..++...+.+.|++... +|.+.. ..+.|.++.|.+. .
T Consensus 262 ~-~~~~~~a~~~~~~l~~l~--~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~-g 337 (415)
T 2fq6_A 262 Q-MVDADTAYITSRGLRTLG--VRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLK-K 337 (415)
T ss_dssp C-CCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES-S
T ss_pred C-CCCHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C
Confidence 1 234554444444555332 2344455566667676655311 222110 1246788888887 4
Q ss_pred CCccchhHHHHHHHHHHHCCc----------EEe--e--------------cCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 372 DPEQIETFSKKFFVAALKNEL----------LLR--P--------------IGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 372 ~~~~~~~~a~~~~~~l~~~Gv----------~~~--~--------------~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
... ...+..+.+.+.-.++ ... | .++.+|++++...++++|+.+.++|++
T Consensus 338 ~~~--~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 338 KLN--NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CCC--HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCC--HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 200 1113445554432221 111 1 136899999999999999998888864
No 212
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=2.2e-19 Score=171.19 Aligned_cols=313 Identities=12% Similarity=0.054 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHhhcc---cc---ccC--CCCCHHHHHHHHHHHhhcCCC-CCeEEEcCCc-hHHHHHHHHHHHHhhhh
Q psy14484 51 SNSYINKALKNQLNKLE---HV---MLS--NLTHKPVIKLSEKLSSLTQYK-LGHCFYGSDG-ASAVEVALKMSFHYWYN 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~---~~---~~~--~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sg-teA~~~al~~~~~~~~~ 120 (430)
.+|.|++++.+.+.... .. ... ....+..+++++++++.++.. ++++++++|+ ++|+..++..+...
T Consensus 14 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~--- 90 (360)
T 1w23_A 14 LPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTK--- 90 (360)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCT---
T ss_pred CCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCC---
Confidence 57999999998875421 00 000 111235678999999999764 4589999998 99999998876531
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHH-HHHhC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEI-LLKKN 198 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~-~l~~~ 198 (430)
|+ +.+.|+....+|+ . ..... ... ..+.++.+. +.. .|+++|++ +++
T Consensus 91 -~~-~g~~vi~~~~~~~-~-~~~~~------------~~g-~~~~v~~~~~~~~------------~d~~~l~~~~i~-- 139 (360)
T 1w23_A 91 -GT-IGNYVLTGSWSEK-A-LKEAK------------LLG-ETHIAASTKANSY------------QSIPDFSEFQLN-- 139 (360)
T ss_dssp -TC-EEEEEECSHHHHH-H-HHHHH------------TTS-EEEEEEECGGGTS------------CSCCCGGGCCCC--
T ss_pred -CC-cccEEEecchhHH-H-HHHHH------------HhC-CeEEeecccccCc------------CCccchHhhccC--
Confidence 10 1223333222221 1 11111 112 223343321 111 15566666 553
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceee--eecccCCC
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC--LSKGITGG 276 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~--~sK~l~gG 276 (430)
+++++|++++ ++|++|.+.+ +++++||+++|+||+|+.+... ..... . |+++ ++|.++..
T Consensus 140 -~~~k~v~~~~-~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~--~--di~~~s~sK~~~~~ 201 (360)
T 1w23_A 140 -ENDAYLHITS-NNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQ--F--GMIYAGAQKNLGPS 201 (360)
T ss_dssp -TTEEEEEEES-EETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGG--C--SEEEEETTTTTSCT
T ss_pred -CCCCEEEEeC-CCCCcceecc---------cccccCCceEEEechhhcCCCC---cCccc--C--CEEEEEcccccCCC
Confidence 5788999888 9999997654 2334899999999999844321 11221 2 6665 55988742
Q ss_pred ccccEEEEEcHHHHHhhhccCCccccc-------ccCCC-CCCHHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHHHH
Q psy14484 277 YLPLSLVMTTDKIYNSIYYKNNINIFL-------HSHSY-SGNPLACCAALATLEIFNK----DNILQRISQDMKKITKA 344 (430)
Q Consensus 277 ~~~ig~~~~~~~~~~~~~~~~~~~~~~-------~~~t~-~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~~~ 344 (430)
++|++++++++++.+... . .... ...++ +.+..++.++.++++.+.+ +...++++++.+++.+.
T Consensus 202 --G~G~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (360)
T 1w23_A 202 --GVTVVIVKKDLLNTKVEQ-V-PTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDT 277 (360)
T ss_dssp --TCEEEEEEHHHHCSCCTT-C-CGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred --CcEEEEEcHHHHhhcccC-C-cchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 489999999887665431 0 0000 11222 3355666666677776543 23566777788888888
Q ss_pred HHchhcCCCeeeE--e-ec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEEEeCCCCCCHHHHHHH
Q psy14484 345 LTSLITHPKIINF--R-QK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHM 417 (430)
Q Consensus 345 l~~l~~~~~~~~~--~-~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~~~~~~~t~e~i~~~ 417 (430)
|+++.. ..... + .. +.++++.+. +. ..+.++.+.|.++||.+.++. +++|++++..+++++++++
T Consensus 278 L~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~ 349 (360)
T 1w23_A 278 IDESNG--FYVGHAEKGSRSLMNVTFNLR-NE-----ELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIAL 349 (360)
T ss_dssp HHTTTT--SSEESSCGGGBCSSEEEEECS-SH-----HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHH
T ss_pred HHHccC--cccccCCchhccCcEEEEEcC-CC-----ccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHH
Confidence 876521 11211 1 12 446777665 31 113578888999999987763 6899999999999999999
Q ss_pred HHHHHHHHHH
Q psy14484 418 TSAIFQTFNE 427 (430)
Q Consensus 418 ~~~l~~~l~~ 427 (430)
+++|++++.+
T Consensus 350 ~~~l~~~~~~ 359 (360)
T 1w23_A 350 RELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 213
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.81 E-value=2.5e-19 Score=171.00 Aligned_cols=315 Identities=8% Similarity=0.031 Sum_probs=194.1
Q ss_pred CCHHHHHHHHHHHhhcccc------ccCCC--CCHHHHHHHHHHHhhcCCCCC-e-EEEcCCchHHHHHHHHHHHHhhhh
Q psy14484 51 SNSYINKALKNQLNKLEHV------MLSNL--THKPVIKLSEKLSSLTQYKLG-H-CFYGSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~------~~~~~--~~~~~~~l~~~l~~~~~~~~~-~-v~~~~sgteA~~~al~~~~~~~~~ 120 (430)
.+|+|++++.+.+.+.... ....+ ..+..+++++.+++.++...+ + +++|+||++|+..+++.+..
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~---- 90 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLK---- 90 (362)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCC----
T ss_pred CCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCC----
Confidence 6899999999887542110 01111 123567899999999986553 6 47789999999999987753
Q ss_pred cCCCCCcEEEEEcCCCCCcch-hhhccCCCccchhhhhccCCCeeEeCCCC--CCCCCCCCChhHHHHHHHHHHHHHHHh
Q psy14484 121 KGFLNKKKFICLQNSYHGETL-GALAVTNIQSFKEIYTSLLNKTYIITTPD--SRNINKGNSANEIARCAIFDLEILLKK 197 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~ 197 (430)
+++.|++.++.++++.. .... ... +...++.+. ..... .|+++++ +
T Consensus 91 ----~gd~vl~~~~~~~~~~~~~~~~------------~~g-~~~~v~~~~~~~~~~~----------~~~~~~~--i-- 139 (362)
T 2c0r_A 91 ----EGQTANYVMTGSWASKALKEAK------------LIG-DTHVAASSEASNYMTL----------PKLQEIQ--L-- 139 (362)
T ss_dssp ----TTCEEEEEECSHHHHHHHHHHH------------HHS-CEEEEEECGGGTTCSC----------CCGGGCC--C--
T ss_pred ----CCCeEEEEecCcHhHHHHHHHH------------HhC-CeEEEecccccccccC----------CCHHHcc--c--
Confidence 45677777665544311 1111 112 233443321 01100 0233332 3
Q ss_pred CCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCC
Q psy14484 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITG 275 (430)
Q Consensus 198 ~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~g 275 (430)
.+++++|++.+ ++|++|....+ +++| +|+++|+||+|+ ++.. ...+. .. |++ +++|.++.
T Consensus 140 -~~~t~~v~~~~-~~n~tG~~~~~---l~~i------~~~~vivD~a~~-~~~~--~~~~~--~~--d~~~~s~~K~~g~ 201 (362)
T 2c0r_A 140 -QDNAAYLHLTS-NETIEGAQFKA---FPDT------GSVPLIGDMSSD-ILSR--PFDLN--QF--GLVYAGAQKNLGP 201 (362)
T ss_dssp -CTTEEEEEEES-EETTTTEECSS---CCCC------TTSCEEEECTTT-TTSS--CCCGG--GC--SEEEEETTTTTCC
T ss_pred -CCCcCEEEEeC-CcCccceeccc---cccc------CCCEEEEEChhh-ccCC--ccchh--HC--cEEEEeccccccC
Confidence 35788888888 88999975332 4444 899999999997 4322 11121 12 655 56798864
Q ss_pred CccccEEEEEcHHHHHhhhccCCcccc-------cccCCCCCCHHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHHHH
Q psy14484 276 GYLPLSLVMTTDKIYNSIYYKNNINIF-------LHSHSYSGNPLACCAALATLEIFNK----DNILQRISQDMKKITKA 344 (430)
Q Consensus 276 G~~~ig~~~~~~~~~~~~~~~~~~~~~-------~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~l~~~ 344 (430)
..+|++++++++.+.+.. .....+ .....++.+..++.++.++|+.+.+ +...++.+++.+++.+.
T Consensus 202 --~G~G~l~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (362)
T 2c0r_A 202 --SGVTVVIVREDLVAESPK-HLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDA 278 (362)
T ss_dssp --SSCEEEEEEGGGSSSCCT-TSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred --cCcEEEEEcHHHHhhccc-cCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 238999999988766543 000000 0022345677777888888886544 34566777788888888
Q ss_pred HHchhcC-CCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---CCEEEEeCCCCCCHHHHHHHHH
Q psy14484 345 LTSLITH-PKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTS 419 (430)
Q Consensus 345 l~~l~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~---~~~lR~~~~~~~t~e~i~~~~~ 419 (430)
|+++... +..... ...+.++.+.+. .. ..+.++++.|.++||.+.++ .+.+|++++..+++++++++++
T Consensus 279 L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~ 352 (362)
T 2c0r_A 279 IDQSGGFYRGCVDVDSRSDMNITFRLA-SE-----ELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQ 352 (362)
T ss_dssp HHTSTTSSEESSCGGGBCSSEEEEECS-CH-----HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHH
T ss_pred HHHcCCccccCCChHHcCCcEEEEEcC-Cc-----chHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHH
Confidence 8765211 111110 112344555544 21 11467888999999987764 2579999998899999999999
Q ss_pred HHHHHHHH
Q psy14484 420 AIFQTFNE 427 (430)
Q Consensus 420 ~l~~~l~~ 427 (430)
+|++++.+
T Consensus 353 ~l~~~~~~ 360 (362)
T 2c0r_A 353 FMEHFKRS 360 (362)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 214
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.81 E-value=1.5e-17 Score=165.03 Aligned_cols=314 Identities=11% Similarity=-0.000 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHhhcCCCC---------CeEEEcCCchHHHHHHHHHHHHhhhh-cCCC-C--------Cc-EEEEEcCCC
Q psy14484 77 KPVIKLSEKLSSLTQYKL---------GHCFYGSDGASAVEVALKMSFHYWYN-KGFL-N--------KK-KFICLQNSY 136 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~---------~~v~~~~sgteA~~~al~~~~~~~~~-~g~~-~--------~~-~vl~~~~~y 136 (430)
....+++++++++++.+. ..+++|+|||+|+..|+.+++..... .+.. + ++ .|++.++.+
T Consensus 113 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h 192 (486)
T 1js3_A 113 ELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAH 192 (486)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCc
Confidence 445567778888886543 36899999999999999887653111 0000 1 12 244555444
Q ss_pred CCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCC---CCeEEEEEcccccc
Q psy14484 137 HGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQC 213 (430)
Q Consensus 137 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~v~~ 213 (430)
+.. ..+... ...+.+.++.+..++. |+++|++++++.. ..+.+|++.. +++
T Consensus 193 ~s~-~~~~~~------------~G~~v~~v~~d~~~~~------------d~~~L~~~i~~~~~~g~~p~~vv~~~-~~n 246 (486)
T 1js3_A 193 SSV-ERAGLI------------GGVKLKAIPSDGKFAM------------RASALQEALERDKAAGLIPFFVVATL-GTT 246 (486)
T ss_dssp HHH-HHHHHH------------HTCEEEEECCCTTSCC------------CHHHHHHHHHHHHHTTCEEEEEEEEB-SCT
T ss_pred HHH-HHHHHh------------CCCceEEeecCCCCCC------------CHHHHHHHHHHHHhCCCCceEEEEeC-CCC
Confidence 332 222211 1223455655433333 8999999997531 1234666666 778
Q ss_pred CCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeee--ecccCCCccccEEEEEcHH-H
Q psy14484 214 AGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCL--SKGITGGYLPLSLVMTTDK-I 289 (430)
Q Consensus 214 ~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~--sK~l~gG~~~ig~~~~~~~-~ 289 (430)
++|.+.+ +++|.++|++||+++|+|++|.++......+.....++ ..|.+++ +|.++.. +++|+++++++ .
T Consensus 247 ~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~ 321 (486)
T 1js3_A 247 SCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTD 321 (486)
T ss_dssp TTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHH
T ss_pred CCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeCHHH
Confidence 8888877 99999999999999999999986432111111101122 3577765 4887765 58999999754 2
Q ss_pred -HHhhhcc-----CCc------ccccc---cCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCe
Q psy14484 290 -YNSIYYK-----NNI------NIFLH---SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKI 354 (430)
Q Consensus 290 -~~~~~~~-----~~~------~~~~~---~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 354 (430)
.+.+... +.. ..... ..+.....+++.+++..+..-.-++..++..++++++.+.|+++ +.+
T Consensus 322 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~ 398 (486)
T 1js3_A 322 LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD---PRF 398 (486)
T ss_dssp HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---TTE
T ss_pred HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---CCe
Confidence 3433210 000 00000 00111223333333333321111344566677788888888764 332
Q ss_pred eeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEE-eec----CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q psy14484 355 INF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLL-RPI----GNTVYLMP-PYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 355 ~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~-~~~----~~~lR~~~-~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
.-. ++...++.|.+. .. .....++.+.|.++|+++ .+. ...+|+++ +..+|+++|++++++|++++.+
T Consensus 399 ~~~~~~~~~~v~f~~~-~~----~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 399 EVCAEVTLGLVCFRLK-GS----DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp EECSCCCSSEEEEEES-SC----HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCceeEEEEEec-Ch----HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 221 244566666665 31 122367888898888653 322 25899986 5567999999999999999876
Q ss_pred hh
Q psy14484 428 VI 429 (430)
Q Consensus 428 ~~ 429 (430)
+.
T Consensus 474 ~~ 475 (486)
T 1js3_A 474 LL 475 (486)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 215
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.81 E-value=4.1e-19 Score=175.86 Aligned_cols=333 Identities=12% Similarity=0.029 Sum_probs=196.9
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHhhcc-cccc---CCCC----CHHHHHHHHHHHhhcCCCCCe---EEEcCCch
Q psy14484 36 YLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVML---SNLT----HKPVIKLSEKLSSLTQYKLGH---CFYGSDGA 104 (430)
Q Consensus 36 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~---~~~~----~~~~~~l~~~l~~~~~~~~~~---v~~~~sgt 104 (430)
.|++.++- ...+|+|++++.+.+.+.. ..+. .+.. ....+.++++++++++.+.++ .++.+||+
T Consensus 46 ~i~L~a~e-----~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs 120 (483)
T 1rv3_A 46 GLELIASE-----NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS 120 (483)
T ss_dssp SEECCTTC-----CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred CeEEEcCC-----CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH
Confidence 45665442 2358999999998776421 0111 0111 234456668899999876643 24445566
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC--C-CCCCCCCCCChh
Q psy14484 105 SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--P-DSRNINKGNSAN 181 (430)
Q Consensus 105 eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 181 (430)
+|+.+++.++.. +++.|++.++.|.++..-...... ...+ + .......+++ + ..+..
T Consensus 121 ~an~~~~~all~--------pGD~Vl~~~~~~~~~~~~~~~~~~-~~v~--~--~G~~~~~v~~~~~~~~~~i------- 180 (483)
T 1rv3_A 121 PANFAVYTALVE--------PHGRIMGLDLPDGGHLTHGFMTDK-KKIS--A--TSIFFESMAYKVNPDTGYI------- 180 (483)
T ss_dssp HHHHHHHHHHTC--------TTCEEEEECGGGTCCGGGCCBCSS-CBCS--H--HHHHSEEEEECBCTTTCSB-------
T ss_pred HHHHHHHHHhcC--------CCCEEEEecCccCcCcchhhhhcc-cCcc--c--ccceEEEEECccccCCCcC-------
Confidence 999988887754 678899999887766321111000 0000 0 0000123333 2 22222
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCccc-cccccc
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGK-FFACEH 259 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~-~~~~~~ 259 (430)
|+++|++++++ .++++|++ . .++++ .+.+ +++|.++|+++|++||+|++|. |+...|. ...+.
T Consensus 181 -----D~d~le~~i~~--~~tklIi~-~-~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~- 245 (483)
T 1rv3_A 181 -----DYDRLEENARL--FHPKLIIA-G-TSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE- 245 (483)
T ss_dssp -----CHHHHHHHHHH--HCCSEEEE-C-CSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-
T ss_pred -----CHHHHHHHHhh--cCCcEEEE-e-CCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-
Confidence 88999999974 25677777 5 55555 4555 9999999999999999999986 3211111 01111
Q ss_pred CCCCCceee--eecccCCCccccEEEEEcHHH---------------HHhhhccCCcccccccC-CCCCCHHHHHHHHHH
Q psy14484 260 AEIWPDFLC--LSKGITGGYLPLSLVMTTDKI---------------YNSIYYKNNINIFLHSH-SYSGNPLACCAALAT 321 (430)
Q Consensus 260 ~~~~~d~~~--~sK~l~gG~~~ig~~~~~~~~---------------~~~~~~~~~~~~~~~~~-t~~~~~~~~~aa~~~ 321 (430)
..|+++ ++|+++| ++.|++++++++ .+.+.. ..... .-+.+...+++..++
T Consensus 246 ---~~div~~s~~K~l~G--prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~------~~~~~~~g~~~~~~iaal~~A 314 (483)
T 1rv3_A 246 ---HCHVVTTTTHKTLRG--CRAGMIFYRRGVRSVDPKTGKEILYNLESLINS------AVFPGLQGGPHNHAIAGVAVA 314 (483)
T ss_dssp ---TCSEEEEESSGGGCC--CSCEEEEEECSBCC-------CCBCCHHHHHHH------HHTTTTCCSCCHHHHHHHHHH
T ss_pred ---CCcEEEecCcccCCC--CCceEEEEcchhhhhccccCcchhhHHHHHhhh------hcCCcccCCccHHHHHHHHHH
Confidence 357775 4599965 578999998752 222221 00111 112234444444556
Q ss_pred HHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeec-ceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEe--
Q psy14484 322 LEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQK-GMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR-- 395 (430)
Q Consensus 322 l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~-- 395 (430)
++.+.. ++..+++.++.+++.+.|+++ ....+. .+. ..+..+.+. .... . ...+.+.|.+.||.+.
T Consensus 315 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~v~~~-~~g~-~---~~~~~~~L~~~gI~v~~~ 386 (483)
T 1rv3_A 315 LKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVT--GGSDNHLILVDLR-SKGT-D---GGRAEKVLEACSIACNKN 386 (483)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG--GSCSSSEEEEEGG-GGTC-C---HHHHHHHHHHTTEECEEE
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEecc--CCCCCceEEEecc-CCCC-C---HHHHHHHHHhCCcEEecC
Confidence 665532 345667778888888888765 222111 111 234445554 2111 1 2567788888999988
Q ss_pred --ec------CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Q psy14484 396 --PI------GNTVYLMPPYILN----KNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 396 --~~------~~~lR~~~~~~~t----~e~i~~~~~~l~~~l~~ 427 (430)
|+ .+.+||+++..++ ++++++++++|++++..
T Consensus 387 ~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 387 TCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 54 2589999887666 99999999999998865
No 216
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.80 E-value=1.6e-18 Score=168.42 Aligned_cols=298 Identities=8% Similarity=-0.031 Sum_probs=181.0
Q ss_pred CCHHHHHHHHHHHhhcc---ccccCCCCCHHHHHHHHHHHhhcCCCCCeEEE---cCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 51 SNSYINKALKNQLNKLE---HVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY---GSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
++++|.+++.+...... ......+.....+++++.+++.++. +...+ ++||++|+..+++.++.
T Consensus 36 n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~--~~~~~~i~~~sGt~Ai~~al~al~~-------- 105 (431)
T 3ht4_A 36 NQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA--EAGLVRPQIISGTHAISTALFGILR-------- 105 (431)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTC--SEECCBTTSCSHHHHHHHHHHTTCC--------
T ss_pred HHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCC--CcccccceeeCHHHHHHHHHHHhCC--------
Confidence 45677777776422111 1122345567788999999999953 33332 56999999999987654
Q ss_pred CCcEEEEEc-CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 125 NKKKFICLQ-NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 125 ~~~~vl~~~-~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++.|++.+ +.|. .+.....+++. ++..+.....+...++.+.+... |+++|+++++ ++++
T Consensus 106 ~Gd~Vl~~~~~~y~-~~~~~~~l~g~--~~~~~~~~G~~~~~v~~~~~~~~------------d~e~l~~~l~---~~tk 167 (431)
T 3ht4_A 106 PGDELLYITGKPYD-TLEEIVGVRGK--GVGSFKEYNIGYNAVPLTEGGLV------------DFEAVAAAIH---SNTK 167 (431)
T ss_dssp TTCEEEECSSSCCT-THHHHTTSSSC--SSSCSGGGTCEEEECCBCTTSSB------------CHHHHHHHCC---TTEE
T ss_pred CCCEEEEeCCCCch-hHHHHHhhccc--ccchHHHcCCEEEEeCCCCCCCc------------CHHHHHhhcC---CCCe
Confidence 567888887 5554 44444433321 22223333444455554333222 8899999985 5788
Q ss_pred EEEEccccccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCc-ccc
Q psy14484 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGY-LPL 280 (430)
Q Consensus 204 ~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~-~~i 280 (430)
+|++++..+|++| ...+.+.+++|.++|++ +|+++|+||+|+.+........ .+....+.+++|.++||+ .+.
T Consensus 168 ~V~i~~sp~np~~-~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~---~g~Di~~~S~sK~lgg~~~~~G 243 (431)
T 3ht4_A 168 MIGIQRSKGYATR-PSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCH---VGADLMAGSLIKNPGGGIVKTG 243 (431)
T ss_dssp EEEEECSCTTSSS-CCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGG---TTCSEEEEETTSGGGTTTCSSC
T ss_pred EEEEECCCCCCCC-CcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccc---cCCeEEEcCccccCCCCCCCce
Confidence 9988842666666 56677889999999999 9999999999987654333221 233333446889998743 456
Q ss_pred EEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc--CCCeeeEe
Q psy14484 281 SLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT--HPKIINFR 358 (430)
Q Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~~~~~ 358 (430)
|++++++++++.+... ......+.+.+..+..+.++...++.+ +...++..+++.++.+.|+++.. .|. ...+
T Consensus 244 G~v~~~~~li~~l~~~--~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p~-~~~~ 318 (431)
T 3ht4_A 244 GYIVGKEQYVEACAYR--LTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSPA-WNAP 318 (431)
T ss_dssp EEEEECHHHHHHHHHH--HSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEESC-TTSC
T ss_pred EEEEecHHHHHHHHHH--hccCCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecCC-CCCC
Confidence 8899999988776540 000111222222111122334444433 34566777888888888887621 111 1234
Q ss_pred ecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 359 QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
+.+.++.+.+. + ...+.++++.|.+..
T Consensus 319 ~~~li~~i~l~-~-----~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 319 RTDLIQSVQFD-D-----KDRMIAFCQAIQYAS 345 (431)
T ss_dssp CSSSCCEEECC-C-----HHHHHHHHHHHHHTS
T ss_pred CccEEEEEEeC-C-----HHHHHHHHHHHHhcC
Confidence 45567777776 3 112467888888763
No 217
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.80 E-value=2.2e-17 Score=163.07 Aligned_cols=315 Identities=10% Similarity=0.011 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhhcCCCC---------CeEEEcCCchHHHHHHHHHHHHhhhhc----CCC------CCcEEEEEcCCCC
Q psy14484 77 KPVIKLSEKLSSLTQYKL---------GHCFYGSDGASAVEVALKMSFHYWYNK----GFL------NKKKFICLQNSYH 137 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~---------~~v~~~~sgteA~~~al~~~~~~~~~~----g~~------~~~~vl~~~~~yh 137 (430)
+...++.++++++++.+. ...+|++|||+||..|+.+++.....+ |.. ..+.+|+.+...|
T Consensus 113 ~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H 192 (475)
T 3k40_A 113 ELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH 192 (475)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC
T ss_pred HHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch
Confidence 455566777888886442 268999999999999999987653211 100 0123444555555
Q ss_pred CcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC---CCCeEEEEEccccccC
Q psy14484 138 GETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN---HNKIAAIIIEPLVQCA 214 (430)
Q Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~ep~v~~~ 214 (430)
-+...+....+ ...+.++.+... . |+++|+++|++. ...+.+|++.. ..++
T Consensus 193 ~s~~~~~~~~g------------~~~~~v~~d~~~-~------------d~~~L~~~i~~~~~~~~~~~~v~~~~-~~t~ 246 (475)
T 3k40_A 193 SSVERAGLLGG------------VKLRSVQSENHR-M------------RGAALEKAIEQDVAEGLIPFYAVVTL-GTTN 246 (475)
T ss_dssp HHHHHHHHHHT------------CEEEEECCBTTB-C------------CHHHHHHHHHHHHHTTCEEEEEEEEB-SCTT
T ss_pred HHHHHHHHHcC------------CceEEEECCCCC-c------------CHHHHHHHHHHHHHCCCccEEEEEEe-cCCC
Confidence 54333322222 233455554333 2 899999999754 12256677776 7788
Q ss_pred CCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEEcHH-HH
Q psy14484 215 GGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMTTDK-IY 290 (430)
Q Consensus 215 ~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~~~~-~~ 290 (430)
+|.+.| +++|.++|++||+++|+|++|.+.......+.....++ ..|.++++ |.+++. ..+|+++++++ ..
T Consensus 247 ~G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l 321 (475)
T 3k40_A 247 SCAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWV 321 (475)
T ss_dssp TCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC
T ss_pred CcCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCC-CceEEEEEeCHHHH
Confidence 898877 99999999999999999999975322211111111232 35877765 887765 46888888754 32
Q ss_pred -Hhhhcc-----CCc-c---cccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeE
Q psy14484 291 -NSIYYK-----NNI-N---IFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINF 357 (430)
Q Consensus 291 -~~~~~~-----~~~-~---~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 357 (430)
+.+... ... . .....+...+.+.......++|+.+.. ++..++..++++++.+.|+++..+..+ .
T Consensus 322 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~--~ 399 (475)
T 3k40_A 322 VNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA--A 399 (475)
T ss_dssp ---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES--S
T ss_pred HHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe--c
Confidence 222110 000 0 000000001111222334444544433 345667778888888888765222211 1
Q ss_pred eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEE-eec---C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHhh
Q psy14484 358 RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLL-RPI---G-NTVYLMPP-YILNKNEIQHMTSAIFQTFNEVI 429 (430)
Q Consensus 358 ~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~-~~~---~-~~lR~~~~-~~~t~e~i~~~~~~l~~~l~~~~ 429 (430)
+....++.|.+. .. .....++.++|.++|.+. .+. + ..+|+++. ..+|+++|++++++|+++.++++
T Consensus 400 ~~~~~iv~f~~~-~~----~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 400 EINMGLVCFRLK-GS----NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp CCBTTEEEEEES-SC----HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEeC-Cc----hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 234556666665 32 122467889999887643 332 2 57999865 44699999999999999998875
No 218
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.80 E-value=1.4e-18 Score=168.03 Aligned_cols=312 Identities=10% Similarity=0.057 Sum_probs=190.1
Q ss_pred CCHHHHHHHHHHHhhccccccCCCC--CHHHHHHHHHHHhhcCCC-CCeEEE-cCCchHHHHHHHHHHHHhhhhcCCCCC
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLT--HKPVIKLSEKLSSLTQYK-LGHCFY-GSDGASAVEVALKMSFHYWYNKGFLNK 126 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~-~~~v~~-~~sgteA~~~al~~~~~~~~~~g~~~~ 126 (430)
.+|+|++++.+....... ....++ .+..+++++++++.++.+ .++|++ ++||++|++.+++.+.. ++
T Consensus 51 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~--------~g 121 (398)
T 2fyf_A 51 VRLEQLQTLTTTAAALFG-TSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID--------KR 121 (398)
T ss_dssp CCHHHHHGGGTTTTTTTT-SCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS--------SC
T ss_pred CCHHHHHHHhhcCCCccC-cCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC--------CC
Confidence 578898888763111000 001121 235678999999999865 358998 99999999999998742 32
Q ss_pred cEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEE
Q psy14484 127 KKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 206 (430)
Q Consensus 127 ~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 206 (430)
++.+...+|+.......... ++......++.++.... +. + + .+++++|+
T Consensus 122 --v~~v~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~g~~~------------~~-~----i---~~~~~~v~ 170 (398)
T 2fyf_A 122 --SLHLTYGEFSAKFASAVSKN---------PFVGEPIIITSDPGSAP------------EP-Q----T---DPSVDVIA 170 (398)
T ss_dssp --EEEEECSHHHHHHHHHHHHC---------TTSCCCEEEECCTTCCC------------CC-C----C---CTTCSEEE
T ss_pred --eEEEeCCHHHHHHHHHHHHh---------CCCCceEEEecCCCCCC------------Cc-c----c---cCCCCEEE
Confidence 23335566653211111000 01123344444421110 11 0 2 24677888
Q ss_pred EccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeee--ecccCCCccccEEEE
Q psy14484 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL--SKGITGGYLPLSLVM 284 (430)
Q Consensus 207 ~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~--sK~l~gG~~~ig~~~ 284 (430)
+.. ++|++|.+.+ +++|.++ +|+++|+||+|+.+... .... .+|++++ +|.++++ .++|+++
T Consensus 171 ~~~-~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~~---~~~~----~~di~~~s~sK~~~~~-gg~g~l~ 234 (398)
T 2fyf_A 171 WAH-NETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGLP---VDIA----ETDAYYFAPQKNFASD-GGLWLAI 234 (398)
T ss_dssp EES-EETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTSC---CCGG----GCSEEEECTTSTTCSC-SSEEEEE
T ss_pred EeC-cCCCcceecc----hHHhhhh---cCCeEEEEeccccCCcc---cCcc----cCcEEEEecCcccCCC-CceEEEE
Confidence 888 8999997776 4444444 89999999999844321 1111 2677755 5998875 2589999
Q ss_pred EcHHHHHhhhcc---CCc-cccc----------ccCC-CCCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHH
Q psy14484 285 TTDKIYNSIYYK---NNI-NIFL----------HSHS-YSGNPLACCAALATLEIFNKD----NILQRISQDMKKITKAL 345 (430)
Q Consensus 285 ~~~~~~~~~~~~---~~~-~~~~----------~~~t-~~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l 345 (430)
+++++++.+... +.. .++. .+.+ .+.+..++.++.++|+.+.+. +..++.+++.+++.+.|
T Consensus 235 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L 314 (398)
T 2fyf_A 235 MSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWA 314 (398)
T ss_dssp ECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 999887765310 000 0000 0122 344566666777778765432 34566777788888888
Q ss_pred HchhcCCCeeeE---e-ecce-EEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec-----CCEEEEeCCCCCCHHHHH
Q psy14484 346 TSLITHPKIINF---R-QKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI-----GNTVYLMPPYILNKNEIQ 415 (430)
Q Consensus 346 ~~l~~~~~~~~~---~-~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~-----~~~lR~~~~~~~t~e~i~ 415 (430)
+++ +++... + ..+. ++++.+. .+. . +.++.+.|.++||.+.++ ++++|++++..+++++++
T Consensus 315 ~~~---~g~~~~~~~~~~~~~~~~~~~~~-~~~---~--~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~ 385 (398)
T 2fyf_A 315 QER---PYTTPFVTDPGLRSQVVGTIDFV-DDV---D--AGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVS 385 (398)
T ss_dssp HHS---TTEEESCCSGGGBCSSEEEEEEC-TTS---C--HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHH
T ss_pred HHc---CCceeccCChhhcCCcEEEEECC-CCC---C--HHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHH
Confidence 765 222211 1 1334 7777775 321 1 367999999999999763 368999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy14484 416 HMTSAIFQTFNE 427 (430)
Q Consensus 416 ~~~~~l~~~l~~ 427 (430)
+++++|++++.+
T Consensus 386 ~~~~~l~~~l~~ 397 (398)
T 2fyf_A 386 ALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 219
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.79 E-value=7.2e-18 Score=163.82 Aligned_cols=285 Identities=14% Similarity=0.111 Sum_probs=174.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccc
Q psy14484 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSF 152 (430)
Q Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~ 152 (430)
.+..+...+++++++++.+ .+..++++||++|+..+++.+.. +++.|++.++.|++......
T Consensus 78 r~~~p~~~~le~~lA~l~g--~~~~v~~~sG~~Ai~~al~al~~--------~Gd~Vi~~~~~y~~~~~~~~-------- 139 (430)
T 3ri6_A 78 RSSNPTVEDLEQRLKNLTG--ALGVLALGSGMAAISTAILTLAR--------AGDSVVTTDRLFGHTLSLFQ-------- 139 (430)
T ss_dssp --CCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHHCC--------TTCEEEEETTCCHHHHHHHH--------
T ss_pred CCCCHHHHHHHHHHHHHHC--CCcEEEECCHHHHHHHHHHHHhC--------CCCEEEEcCCCchhHHHHHH--------
Confidence 5667888999999999994 45688888999999999987754 67889999999987533211
Q ss_pred hhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHH
Q psy14484 153 KEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREIC 232 (430)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~ 232 (430)
........+..+++.. |+++++++++ +++++|++|. ++|++|.+.+ +++|.++|
T Consensus 140 -~~~~~~G~~~~~v~~~-----------------d~~~l~~ai~---~~t~~v~~e~-p~NptG~~~d----l~~i~~la 193 (430)
T 3ri6_A 140 -KTLPSFGIEVRFVDVM-----------------DSLAVEHACD---ETTKLLFLET-ISNPQLQVAD----LEALSKVV 193 (430)
T ss_dssp -THHHHTTCEEEEECTT-----------------CHHHHHHHCC---TTEEEEEEES-SCTTTCCCCC----HHHHHHHH
T ss_pred -HHHHHcCCEEEEeCCC-----------------CHHHHHHhhC---CCCeEEEEEC-CCCCCCeecC----HHHHHHHH
Confidence 0011122334455443 7889998885 5789999999 9999998877 99999999
Q ss_pred HhcCCEEEEeccccCCCCcccccccccCCCCCceeeeecccCCCccccEEEEE--cH-HH------------------HH
Q psy14484 233 NNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMT--TD-KI------------------YN 291 (430)
Q Consensus 233 ~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~sK~l~gG~~~ig~~~~--~~-~~------------------~~ 291 (430)
+++|+++|+||+++ .+. .......+....+.+++|.++|+...+|.+++ .+ .+ ++
T Consensus 194 ~~~g~~livD~a~~-~~~---~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~ 269 (430)
T 3ri6_A 194 HAKGIPLVVDTTMT-PPY---LLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLY 269 (430)
T ss_dssp HTTTCCEEEECTTS-CTT---TCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHH
T ss_pred HHcCCEEEEECCCc-ccc---cCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHH
Confidence 99999999999987 221 11122234433444678999873234555544 22 22 11
Q ss_pred hhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCeeeEe-------------
Q psy14484 292 SIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFR------------- 358 (430)
Q Consensus 292 ~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------------- 358 (430)
.+.. ..........++..+..+...++.+. ...++..++++++.+.|++. |.+..+.
T Consensus 270 ~~~~-----~~~~~~g~~~~~~~a~l~l~~l~~l~--~r~~~~~~na~~la~~L~~~---p~v~~V~~P~l~~~p~~~~~ 339 (430)
T 3ri6_A 270 KARK-----EVFQNLGPSLSPHNAYLQSLGLETMA--LRIERSCQNAQELAHWLLSI---PQVKCVNHPSLPDSPFYAIA 339 (430)
T ss_dssp HHHH-----THHHHHCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTC---TTCEEEECTTSTTSTTHHHH
T ss_pred HHHH-----HHHHhcCCCCCHHHHHHHHhhhhhHH--HHHHHHHHHHHHHHHHHhCC---CCccEEECCCCCCCccHHHH
Confidence 1111 00011111235555554444554432 23455566777777777643 3333221
Q ss_pred ----ecce-EEEEEEeecCCccchhHHHHHHHHHHHCCcEEee----------------------------cCCEEEEeC
Q psy14484 359 ----QKGM-IWAFDVIIEDPEQIETFSKKFFVAALKNELLLRP----------------------------IGNTVYLMP 405 (430)
Q Consensus 359 ----~~g~-~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~----------------------------~~~~lR~~~ 405 (430)
+.|. +++|++. + ...+.+|.+.+...++.+.. .++.+|+++
T Consensus 340 ~~~~g~Gg~~lsf~l~-~-----~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsv 413 (430)
T 3ri6_A 340 KRQFRYAGSILTFELE-S-----KEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSV 413 (430)
T ss_dssp HHHCSSCCSEEEEECS-S-----HHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEEC
T ss_pred HHhCCCCceEEEEEEC-C-----HHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEe
Confidence 3366 8899886 3 11245677766543322211 136789987
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q psy14484 406 PYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l 425 (430)
.. |+++.+++.|+++|
T Consensus 414 G~----E~~~dl~~dl~~al 429 (430)
T 3ri6_A 414 GI----EEIEDLKEDILQAL 429 (430)
T ss_dssp CS----SCHHHHHHHHHHHH
T ss_pred cc----CCHHHHHHHHHHhh
Confidence 64 44556666666654
No 220
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.78 E-value=3.1e-17 Score=157.21 Aligned_cols=316 Identities=13% Similarity=0.045 Sum_probs=194.9
Q ss_pred CCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHHH-HhhcCCCCCeEEEcCCchHHHHHHHHHH-HHhhhhcCCCCCcE
Q psy14484 51 SNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL-SSLTQYKLGHCFYGSDGASAVEVALKMS-FHYWYNKGFLNKKK 128 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~v~~~~sgteA~~~al~~~-~~~~~~~g~~~~~~ 128 (430)
.+|++.+++.+.+..... ....+...++++.+ ++.++ ..+++++++||++|+..+++.+ .. +++.
T Consensus 14 ~~~~i~~a~~~~~~~~~~----~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~--------~Gd~ 80 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHIY----TNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRK--------KGKY 80 (377)
T ss_dssp CGGGGHHHHHHHHHHTCC----SSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCT--------TCCE
T ss_pred CcHHHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCC--------CcCE
Confidence 357889999998876431 11246678999999 99985 3678999999999999999876 33 6688
Q ss_pred EEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEE
Q psy14484 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207 (430)
Q Consensus 129 vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ 207 (430)
||+.+++|+......... ....++++.+ +++.. |++++++++.....++++|+
T Consensus 81 Vi~~~~~~~~~~~~~~~~-------------G~~~~~v~~~~~~~~~------------d~~~l~~~i~~~~~~tk~v~- 134 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWC-------------GLEPYFIDISIDDWYM------------DKTVLWDKIEELKEEVAIVV- 134 (377)
T ss_dssp EEEESSSCTHHHHHHHHT-------------TCEEEEECBCTTTCSB------------CHHHHHHHHHHHGGGEEEEC-
T ss_pred EEECCCCcHHHHHHHHHc-------------CCEEEEEecCCccCCc------------CHHHHHHHHhcCCCCceEEE-
Confidence 999999987654332221 1223444443 22222 88999998832111377776
Q ss_pred ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC-CCCCceeeee----cccCCCccccEE
Q psy14484 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA-EIWPDFLCLS----KGITGGYLPLSL 282 (430)
Q Consensus 208 ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~-~~~~d~~~~s----K~l~gG~~~ig~ 282 (430)
| + +.+|...+ +++|.++|+ ||+++|+|++|+ +|.. +.-... +...|+.++| |.+++| ..|+
T Consensus 135 -~-~-~~~G~~~~----~~~i~~la~-~~~~vi~D~a~a-~g~~---~~~~~~g~~~~d~~~~S~~~~K~l~~g--~gG~ 200 (377)
T 3ju7_A 135 -P-Y-ATFGSWMN----LEEYEELEK-KGVPVVVDAAPG-FGLM---NGGMHYGQDFSGMIIYSFHATKPFGIG--EGGL 200 (377)
T ss_dssp -C-B-CGGGBCCC----CHHHHHHHH-TTCCBEEECTTC-TTCE---ETTEETTTTCSSEEEEECBTTSSSCCB--SCEE
T ss_pred -E-E-CCCCCccC----HHHHHHHHh-cCCEEEEECCCc-cCCe---ECCEeccCCCCcEEEEECCCCCcCCCC--CcEE
Confidence 3 3 34565655 899999999 999999999997 4321 111112 2224666554 888874 4667
Q ss_pred EEEc-HHHHHhhhc---cCCcc---cccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcC--CC
Q psy14484 283 VMTT-DKIYNSIYY---KNNIN---IFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITH--PK 353 (430)
Q Consensus 283 ~~~~-~~~~~~~~~---~~~~~---~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~ 353 (430)
++.+ +++.+.+.. .+... ....+..+..+++.++.+...++.+ +...++.+++.+++.+.|+++... +.
T Consensus 201 ~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l--~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 278 (377)
T 3ju7_A 201 IYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKW--DDKLKERTRISEWYKQLLQSNGLMKKGW 278 (377)
T ss_dssp EEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHTTTTTTTC
T ss_pred EEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 7664 566554432 11000 0011223445566655565555533 345677778888888888776321 11
Q ss_pred eee--EeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec--------------------------CCEEEEeC
Q psy14484 354 IIN--FRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------------------------GNTVYLMP 405 (430)
Q Consensus 354 ~~~--~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------------------------~~~lR~~~ 405 (430)
... ......++.+.+. +. . . .+.+.+.|.++||.+... ...+|+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~-~~-~-~---~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~ 352 (377)
T 3ju7_A 279 QLQKTEAVIQQFMPILCP-EE-V-R---NKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL 352 (377)
T ss_dssp BCCCCSCBCCSSEEEECC-TT-S-C---HHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC
T ss_pred cCCCCCcceEEEEEEEeC-Ch-h-h---HHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC
Confidence 111 0111122333333 21 1 1 367999999999977531 14789998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy14484 406 PYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 406 ~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+...|++|++.+++.|++++..
T Consensus 353 ~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 353 WEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp CTTCCHHHHHHHHHHHTC----
T ss_pred CCCCCHHHHHHHHHHHHHHHhc
Confidence 9899999999999999887653
No 221
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.78 E-value=4.5e-18 Score=161.51 Aligned_cols=325 Identities=9% Similarity=0.007 Sum_probs=197.0
Q ss_pred CCCCHHHHHHHHHHHhhccccccC----CC----CCHHHHHHHHHHHhhcCCCC-CeEEE-cCCchHHHHHHHHHHHHhh
Q psy14484 49 GHSNSYINKALKNQLNKLEHVMLS----NL----THKPVIKLSEKLSSLTQYKL-GHCFY-GSDGASAVEVALKMSFHYW 118 (430)
Q Consensus 49 G~~~p~v~~a~~~~~~~~~~~~~~----~~----~~~~~~~l~~~l~~~~~~~~-~~v~~-~~sgteA~~~al~~~~~~~ 118 (430)
+.-+|+|.+++.+.+.+....+.+ .. .....++.++.++++++++. .+|+| ++|||+|++.+++.+....
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~ 101 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLK 101 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGS
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCC
Confidence 346899999999987643222111 11 12456788889999998654 47888 5899999999999776421
Q ss_pred hhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhC
Q psy14484 119 YNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN 198 (430)
Q Consensus 119 ~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 198 (430)
+++++++...+.++....... .........++.+..... ++++++..+
T Consensus 102 ------~Gd~v~~~~~g~~~~~~~~~a-----------~~~G~~~~~~~~~~~~~~------------~~~~~~~~i--- 149 (377)
T 3e77_A 102 ------AGRCADYVVTGAWSAKAAEEA-----------KKFGTINIVHPKLGSYTK------------IPDPSTWNL--- 149 (377)
T ss_dssp ------TTCEEEECCCSHHHHHHHHHH-----------TTTSEEEECSCCCSSSCS------------CCCGGGCCC---
T ss_pred ------CCCeEEEEECCHHHHHHHHHH-----------HHhCCceEEeccCCCcCC------------CCChHHhcc---
Confidence 246676655555443111000 001111122233221111 233344334
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCC
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGG 276 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG 276 (430)
.+++++|.+.. +.+.+|.+.| + +|+++|+++++|.+|+ +|.. .+.++.++ ++++| |.+| .
T Consensus 150 ~~~t~lV~~~h-~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~g~~--~id~~~~~----~~~~s~~K~~g-p 211 (377)
T 3e77_A 150 NPDASYVYYCA-NETVHGVEFD----F-----IPDVKGAVLVCDMSSN-FLSK--PVDVSKFG----VIFAGAQKNVG-S 211 (377)
T ss_dssp CTTCSCEEEES-EETTTTEECS----S-----CCCCTTCCEEEECTTT-TTSS--CCCGGGCS----EEEEEGGGTTS-C
T ss_pred CCCccEEEEeC-ccCchheEch----h-----hhccCCCEEEEEcccc-cCCC--CCchhhcC----EEEEecccccC-C
Confidence 35667777766 6666798888 4 4889999999999997 5432 23344333 45555 8884 3
Q ss_pred ccccEEEEEcHHHHHhhhccCCcccc------cccCCC-CCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHH
Q psy14484 277 YLPLSLVMTTDKIYNSIYYKNNINIF------LHSHSY-SGNPLACCAALATLEIFNKD----NILQRISQDMKKITKAL 345 (430)
Q Consensus 277 ~~~ig~~~~~~~~~~~~~~~~~~~~~------~~~~t~-~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l 345 (430)
..+|++++++++.+.+.+. .+..+ ....++ +++..+..+..++|+.+.+. +..++.+++.+++++.|
T Consensus 212 -~G~g~l~~~~~~l~~~~~~-~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L 289 (377)
T 3e77_A 212 -AGVTVVIVRDDLLGFALRE-CPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEII 289 (377)
T ss_dssp -TTCEEEEEETTSCSCCCTT-SCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -CccEEEEEcHHHHhhccCC-CCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 4689999998876544320 00000 011222 34556666677788876543 45677788888888888
Q ss_pred HchhcCC-CeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEEEeCCCCCCHHHHHHHHHH
Q psy14484 346 TSLITHP-KIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 346 ~~l~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+++.... ..... ...+.++.|.++ .- ....++...+.+.+.++||.+.++. +.+|+++...+|++||+.+++.
T Consensus 290 ~~~~g~~~~~~~~~~rs~~ivsf~~~-~~-~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~a 367 (377)
T 3e77_A 290 DNSQGFYVCPVEPQNRSKMNIPFRIG-NA-KGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAF 367 (377)
T ss_dssp HTSTTSEECCSCGGGBCSSEEEEEES-ST-TCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHH
T ss_pred HhcCCceecCCCHHHcCCcEEEEEcC-CC-CCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHH
Confidence 8763221 11011 122445777776 31 1112222457788889999987652 5699999999999999999999
Q ss_pred HHHHHHH
Q psy14484 421 IFQTFNE 427 (430)
Q Consensus 421 l~~~l~~ 427 (430)
|++++++
T Consensus 368 l~~~~~~ 374 (377)
T 3e77_A 368 MKKFLEM 374 (377)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 222
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.78 E-value=1.6e-18 Score=167.14 Aligned_cols=254 Identities=8% Similarity=0.028 Sum_probs=159.4
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCc----EEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK----KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPD 170 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~----~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (430)
++|++|+|+++|+..+++++.. +++ .|++.+|+|.++.......+. ....++.
T Consensus 92 ~~i~~t~G~~~al~~~~~~l~~--------~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~-------------~~~~~~~-- 148 (391)
T 3bwn_A 92 RYIVVGTGSTQLCQAAVHALSS--------LARSQPVSVVAAAPFYSTYVEETTYVRS-------------GMYKWEG-- 148 (391)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHH--------TSSSSSEEEEECSSCCTHHHHHHHTTCB-------------TTEEEEE--
T ss_pred CeEEEeCChHHHHHHHHHHhcC--------CCCCCcceEEEcCCCchhHHHHHHHcCC-------------eEEEecC--
Confidence 5899999999999999998875 455 899999999876443332211 1122222
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC--CEEEEeccccCC
Q psy14484 171 SRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN--IHLIADEIAVGC 248 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g--i~li~DEv~~g~ 248 (430)
|.+.++ ..+++++++.. ++|++|.+.. +|.+ ++++ +++|+||+|..
T Consensus 149 ----------------d~~~l~------~~~~k~v~l~~-p~NPtG~~~~------~l~~--~~~~~~~~ii~De~y~~- 196 (391)
T 3bwn_A 149 ----------------DAWGFD------KKGPYIELVTS-PNNPDGTIRE------TVVN--RPDDDEAKVIHDFAYYW- 196 (391)
T ss_dssp ----------------ESTTCC------CCSCEEEEEES-SCTTTCCCCC------CCC-------CCCEEEEECTTCS-
T ss_pred ----------------CHHHcC------CCCCEEEEECC-CCCCCchhHH------HHHH--HhhcCCCEEEEeCCCCC-
Confidence 112222 13567776666 7888887763 2333 2255 99999999962
Q ss_pred CCcccccccccCCCCCceeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh
Q psy14484 249 GRTGKFFACEHAEIWPDFLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326 (430)
Q Consensus 249 g~~g~~~~~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 326 (430)
.. ...... ..+....+.+|||.++ .| +|+|++++ ++++++.+.. .....+++.+.+++.++.++|+...
T Consensus 197 ~~-~~~l~~-~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~l~~~l~~------~~~~~~~~~~~~~q~a~~~~l~~~~ 267 (391)
T 3bwn_A 197 PH-YTPITR-RQDHDIMLFTFSKITGHAG-SRIGWALVKDKEVAKKMVE------YIIVNSIGVSKESQVRTAKILNVLK 267 (391)
T ss_dssp TT-TSCCCC-CBCCSEEEEEHHHHHSCGG-GCEEEEEECCHHHHHHHHH------HHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CC-CCcccc-CCCCeEEEEechhhcCCCc-cceEEEEecCHHHHHHHHH------HhcccccCCCHHHHHHHHHHHhCcc
Confidence 21 111111 1222223447899987 46 89999997 8888887765 2222345678888888888886432
Q ss_pred h--------cC----HHHHHHHHHHHHHHHHHchhcCCCeee--------------EeecceEEEEEEeecCCccchhHH
Q psy14484 327 K--------DN----ILQRISQDMKKITKALTSLITHPKIIN--------------FRQKGMIWAFDVIIEDPEQIETFS 380 (430)
Q Consensus 327 ~--------~~----~~~~~~~~~~~l~~~l~~l~~~~~~~~--------------~~~~g~~~~~~~~~~~~~~~~~~a 380 (430)
. +. ..+.++++.+++.+.|+++ +.+.. .+..|.++++.+. +.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~-~~-------- 335 (391)
T 3bwn_A 268 ETCKSESESENFFKYGREMMKNRWEKLREVVKES---DAFTLPKYPEAFCNYFGKSLESYPAFAWLGTK-EE-------- 335 (391)
T ss_dssp HHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC---SSEECCCCCCEEETTTTEEECCCCSEEEEEES-SS--------
T ss_pred hhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccCCCcceEEEecCC-cH--------
Confidence 1 23 3455566666666666654 22211 1233456666665 31
Q ss_pred HHHHHHHHHCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 381 KKFFVAALKNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 381 ~~~~~~l~~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
..+.+.|.++||.+.|+ .+++||+++ .+++++++++++|+++++
T Consensus 336 ~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 336 TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLANMKL 385 (391)
T ss_dssp CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 23566777899999985 368999776 489999999999987764
No 223
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.76 E-value=8.3e-19 Score=171.00 Aligned_cols=318 Identities=9% Similarity=-0.005 Sum_probs=188.7
Q ss_pred CCCEEEecccccccccCCCCCHHHHHHHHHHHhh-ccc---cccCC-C---CCHHHHHHHHHHHhhcC--CCCCeEEEcC
Q psy14484 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNK-LEH---VMLSN-L---THKPVIKLSEKLSSLTQ--YKLGHCFYGS 101 (430)
Q Consensus 32 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~---~~~~~-~---~~~~~~~l~~~l~~~~~--~~~~~v~~~~ 101 (430)
+.+.++||..+ ...++ .++.+++++.+.+.. ... +.... + ..++++.+++.+.+... .++++|++|+
T Consensus 54 ~~~~~i~l~~g--~~~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 54 IQGCSADVASG--DGLFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp CTTCCEECCSC--CCGGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCCceEEecCc--CCCCC-CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 44566777665 23332 235666777765521 111 11111 2 23444555555544321 4678999999
Q ss_pred CchHHHHHHHHHH--------HHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCC
Q psy14484 102 DGASAVEVALKMS--------FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN 173 (430)
Q Consensus 102 sgteA~~~al~~~--------~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (430)
|+++|+..+++++ .. +++.|++.+|+|.++.......+.. . +. +.
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~--------~Gd~Vlv~~P~y~~~~~~~~~~g~~-~------------~~--~~---- 183 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDA--------PESKVVAHAPFYPVFREQTKYFDKK-G------------YV--WA---- 183 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTS--------CCEEEEECSSCCHHHHHHHHHSCBT-T------------EE--EE----
T ss_pred CHHHHHHHHHHHHhhccccccCC--------CCCEEEEeCCCcccHHHHHHHcCCe-e------------ee--ec----
Confidence 9999999999887 43 5688999999998765443332211 0 11 11
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCccc
Q psy14484 174 INKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253 (430)
Q Consensus 174 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~ 253 (430)
.|+++|+++++ .+++++++.. ++|++|.+.+ +. ++ ++..+.|+.+-+ ...+
T Consensus 184 ------------~d~~~l~~~~~---~~~k~v~l~~-p~NPtG~~~~--~~-------l~--~~~~i~d~~~~~--~~~s 234 (427)
T 2hox_A 184 ------------GNAANYVNVSN---PEQYIEMVTS-PNNPEGLLRH--AV-------IK--GCKSIYDMVYYW--PHYT 234 (427)
T ss_dssp ------------EEGGGGTTCSC---GGGEEEEEES-SCTTTCCCCC--CS-------ST--TCEEEEECTTCS--TTTS
T ss_pred ------------CCHHHHHHhhc---CCceEEEEcC-CCCCcccccH--HH-------Hc--CCCEEEeecccC--CCCC
Confidence 05567776664 3566777766 7888886665 32 22 456778876531 1101
Q ss_pred ccccccCCCCCceeeeecccC-CCccccEEEEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHh-----
Q psy14484 254 FFACEHAEIWPDFLCLSKGIT-GGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN----- 326 (430)
Q Consensus 254 ~~~~~~~~~~~d~~~~sK~l~-gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~----- 326 (430)
...+. .+...-+.+|||.++ .| +|+|++++ ++++++.+.. .....+++.+.+++.++.++|+...
T Consensus 235 ~~~~~-~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~l~~~l~~------~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~ 306 (427)
T 2hox_A 235 PIKYK-ADEDILLFTMSKFTGHSG-SRFGWALIKDESVYNNLLN------YMTKNTEGTPRETQLRSLKVLKEVVAMVKT 306 (427)
T ss_dssp CCCSC-BCCSEEEEEHHHHTSCGG-GCCEEEEECCHHHHHHHHH------HHHHHTSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccC-CCceEEEEeChhcCCCCC-ceEEEEEECCHHHHHHHHH------HHHhcCCCCCHHHHHHHHHHhhcchhhhcc
Confidence 11111 122222347899987 46 79999999 4888887765 2233445677888877777776431
Q ss_pred ----hcCH----HHHHHHHHHHHHHHHHchhcCCC-----------eee-EeecceEEEEEEeecCCccchhHHHHHHHH
Q psy14484 327 ----KDNI----LQRISQDMKKITKALTSLITHPK-----------IIN-FRQKGMIWAFDVIIEDPEQIETFSKKFFVA 386 (430)
Q Consensus 327 ----~~~~----~~~~~~~~~~l~~~l~~l~~~~~-----------~~~-~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~ 386 (430)
.+++ .++++++.+++.+.|+++..... +.. .+..|+++++.+. .+ ..++++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~-~~-------~~~~~~~ 378 (427)
T 2hox_A 307 QKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCE-WE-------EDKDCYQ 378 (427)
T ss_dssp HTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEEC-SG-------GGCSHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECC-Cc-------HHHHHHH
Confidence 1233 35556666667676665411110 001 1222566666766 31 1346676
Q ss_pred HH-HCCcEEeec------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 387 AL-KNELLLRPI------GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 387 l~-~~Gv~~~~~------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
|+ ++||.+.|+ .+++|+++. .+++++++++++|++++.
T Consensus 379 ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 379 TFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp HHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHHHHHHHHHHHT
T ss_pred HHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 65 789999985 368999776 489999999999998874
No 224
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.76 E-value=3e-17 Score=161.28 Aligned_cols=316 Identities=11% Similarity=0.053 Sum_probs=178.7
Q ss_pred CCHHHHHHHHHHHhh-ccccccC---CCC----CHHHHHHHHHHHhhcCCCCC---eEEEcCCchHHHHHHHHHHHHhhh
Q psy14484 51 SNSYINKALKNQLNK-LEHVMLS---NLT----HKPVIKLSEKLSSLTQYKLG---HCFYGSDGASAVEVALKMSFHYWY 119 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~-~~~~~~~---~~~----~~~~~~l~~~l~~~~~~~~~---~v~~~~sgteA~~~al~~~~~~~~ 119 (430)
.+|+|++|+...+.+ +...+.. ... ..+....+++++++++...+ ..++++||++||..++..++.
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~--- 142 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQ--- 142 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC---
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcC---
Confidence 479999998887643 2211110 111 23333455889999976654 245667999999999998764
Q ss_pred hcCCCCCcEEEEEcCCCCCcchh-------hhccCCCccchhhhhccCCCeeEeCCC---CCCCCCCCCChhHHHHHHHH
Q psy14484 120 NKGFLNKKKFICLQNSYHGETLG-------ALAVTNIQSFKEIYTSLLNKTYIITTP---DSRNINKGNSANEIARCAIF 189 (430)
Q Consensus 120 ~~g~~~~~~vl~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~ 189 (430)
+++.|++.++.|.++..- ....++ .....++++ ..+. .|++
T Consensus 143 -----pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g------------~~~~~~~~~vd~~~~~------------iD~d 193 (490)
T 2a7v_A 143 -----PHDRIMGLDLPDGGHLTHGYMSDVKRISATS------------IFFESMPYKLNPKTGL------------IDYN 193 (490)
T ss_dssp -----SCEECCC-------------------------------------------CCBCTTTCS------------BCHH
T ss_pred -----CCCEecccCccccccccchhhhcchhHHHcC------------CeEEEEecccccccCC------------cCHH
Confidence 678888888777554211 011111 001112222 1122 2899
Q ss_pred HHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecccc-CCCCccc-ccccccCCCCCcee
Q psy14484 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV-GCGRTGK-FFACEHAEIWPDFL 267 (430)
Q Consensus 190 ~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~-g~g~~g~-~~~~~~~~~~~d~~ 267 (430)
+|++.+.++ ++++|++.. ..+ |...+ +++|.++|++||++||+|++|. |+...|. ...+. ..|++
T Consensus 194 ~le~~l~~~--~~klIi~~~-s~~--~~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~----~aDiv 260 (490)
T 2a7v_A 194 QLALTARLF--RPRLIIAGT-SAY--ARLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADIV 260 (490)
T ss_dssp HHHHHHHHH--CCSEEEECC-SSC--CSCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG----TCSEE
T ss_pred HHHHHHhhc--CCcEEEEcC-CCC--CCccc----HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC----CCCEE
Confidence 999998753 345666544 222 32334 9999999999999999999975 3211221 11111 24666
Q ss_pred --eeecccCCCccccEEEEEcHH---------------HHHhhhccCCcccccccCCCC-CCHHHHHHHHHHHHHHhh--
Q psy14484 268 --CLSKGITGGYLPLSLVMTTDK---------------IYNSIYYKNNINIFLHSHSYS-GNPLACCAALATLEIFNK-- 327 (430)
Q Consensus 268 --~~sK~l~gG~~~ig~~~~~~~---------------~~~~~~~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~~~~-- 327 (430)
+++|+++| .+.|+++++++ +.+.+.. ....++.+ .++..+++..+++.....
T Consensus 261 ~~S~hK~l~G--p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~------~~~~g~qggp~~~~iaAla~Al~~~~~~~ 332 (490)
T 2a7v_A 261 TTTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINF------AVFPSLQGGPHNHAIAAVAVALKQACTPM 332 (490)
T ss_dssp EEESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHH------HHTTTTCCSCCHHHHHHHHHHHHHHHSHH
T ss_pred EECCcccCcc--ccchheeeccchhcccccccchhhHHHHHHHHH------HhcccCCCCchHHHHHHHHHHHHHHhhhh
Confidence 46699965 46788888764 3333332 11122222 234444444445554432
Q ss_pred -cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeec---------
Q psy14484 328 -DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPI--------- 397 (430)
Q Consensus 328 -~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~--------- 397 (430)
+++.+++.++++++.+.|++. .+..+.. .....++.+.+. .... . ..++.+.|.+.||.+...
T Consensus 333 ~~~~~~~~~~na~~L~~~L~~~-G~~v~~~-~t~t~lv~vdl~-~~g~-~---~~~~~~~L~~~GI~v~~~~~p~d~~p~ 405 (490)
T 2a7v_A 333 FREYSLQVLKNARAMADALLER-GYSLVSG-GTDNHLVLVDLR-PKGL-D---GARAERVLELVSITANKNTCPGDRSAI 405 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECT-TTTC-C---HHHHHHHHHHTTEECEEECCTTCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CcEEecC-CCCCeEEEEEeC-CCCC-C---HHHHHHHHHhCCeEEecCccCCCCCCC
Confidence 446677888999999999875 2221110 012245555554 3211 1 356788888999998741
Q ss_pred -CCEEEEeCC----CCCCHHHHHHHHHHHHHHHH
Q psy14484 398 -GNTVYLMPP----YILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 398 -~~~lR~~~~----~~~t~e~i~~~~~~l~~~l~ 426 (430)
+..+|+..+ ..++++|++++++.|.+++.
T Consensus 406 ~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 367999654 34689999999999998875
No 225
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.75 E-value=1.3e-16 Score=156.15 Aligned_cols=291 Identities=9% Similarity=0.040 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
+...+++++++++++.+.+++.+++|++.++++++.+++. . ++++|++.++.|+.+....... .
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~-~------~gd~Viv~~~~h~s~~~~~~~~---------a 171 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRE-T------GRMGVLVSQGVHPEYRAVLRAY---------L 171 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHH-H------TCCEEEEETTSCHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhc-C------CCCEEEEcCccCHhHHHHHHHH---------H
Confidence 5678999999999976666778999999555554433322 1 5678888777665432111110 0
Q ss_pred hccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcC
Q psy14484 157 TSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYN 236 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~g 236 (430)
.....+++.++. ++... |+++ + .+++++|+++. + |++|.+.+ +++|.++|+++|
T Consensus 172 ~~~G~~v~~v~~-~~~~~------------d~~~----i---~~~t~~v~i~~-p-n~tG~~~~----l~~i~~la~~~g 225 (438)
T 1wyu_A 172 EAVGAKLLTLPL-EGGRT------------PLPE----V---GEEVGAVVVQN-P-NFLGALED----LGPFAEAAHGAG 225 (438)
T ss_dssp HHTTCEEEEECC-BTTBC------------CCCC----C---CTTEEEEEEES-S-CTTSBCCC----HHHHHHHHHHTT
T ss_pred HHCCCEEEEEcC-cCCcc------------CHHH----h---CCCeEEEEEEC-C-CCCeEEec----HHHHHHHHHHcC
Confidence 001122344443 11111 3333 3 35788999888 8 88898876 999999999999
Q ss_pred CEEEEecc-ccCCCCcccccccccCCCCCceeeee-cccC-----CCccccEEEEEcHHHHHhhhcc--C------Cccc
Q psy14484 237 IHLIADEI-AVGCGRTGKFFACEHAEIWPDFLCLS-KGIT-----GGYLPLSLVMTTDKIYNSIYYK--N------NINI 301 (430)
Q Consensus 237 i~li~DEv-~~g~g~~g~~~~~~~~~~~~d~~~~s-K~l~-----gG~~~ig~~~~~~~~~~~~~~~--~------~~~~ 301 (430)
+++|+|.. ++ ++..... .. ..+|++++| |.++ +| .++|++++++++.+.+... + ..+.
T Consensus 226 ~~vivd~d~~a-~g~~~~~---~~--~g~D~~~~s~kk~~~~~~~~G-p~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 226 ALFVAVADPLS-LGVLKPP---GA--YGADIAVGDGQSLGLPMGFGG-PHFGFLATKKAFVRQLPGRLVSETVDVEGRRG 298 (438)
T ss_dssp CEEEEECCTTG-GGTBCCH---HH--HTCSEEEEECTTTTCCCGGGC-SCCEEEEECGGGGGGCCSCCEEEEEBTTSCEE
T ss_pred CEEEEEechhh-ccCcCCC---cc--CCCCEEEECCcccCCCccCCC-CCeeEEEEcHHHHHhCCCceeccccccCCCcc
Confidence 99996622 22 2211111 11 246888875 6532 24 4799999999887665320 0 0000
Q ss_pred c------------cccCCCCC---CHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceE
Q psy14484 302 F------------LHSHSYSG---NPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMI 363 (430)
Q Consensus 302 ~------------~~~~t~~~---~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~ 363 (430)
+ ....|++. +.++..++...+..+.. ++..++.+++.+++.+.|+++. ++........+
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~~~ 375 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVP---GVRPFTPKPFF 375 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST---TCEECSCSSBC
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEECCCCCeE
Confidence 0 01233332 22322222222443332 3455667778888888887652 22211111233
Q ss_pred EEEEEeecCCccchhHHHHHHHHHHHCCcEE--eec----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q psy14484 364 WAFDVIIEDPEQIETFSKKFFVAALKNELLL--RPI----GNTVYLMPPYILNKNEIQHMTSAIFQTF 425 (430)
Q Consensus 364 ~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~--~~~----~~~lR~~~~~~~t~e~i~~~~~~l~~~l 425 (430)
..+.+. .+. . +.++++.|.++||.+ .++ .+.+|++++..+|++++++++++|++++
T Consensus 376 ~~~~~~-~~~--~---~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 376 NEFALA-LPK--D---PEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp SEEEEE-CSS--C---HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEEe-CCC--C---HHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 323333 211 1 367999999999998 443 4799999999999999999999998764
No 226
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.72 E-value=5.5e-16 Score=146.67 Aligned_cols=315 Identities=9% Similarity=-0.032 Sum_probs=190.4
Q ss_pred CCHHHHHHHHHHHhhccccccC----CC----CCHHHHHHHHHHHhhcCCC-CCeEEE-cCCchHHHHHHHHHHHHhhhh
Q psy14484 51 SNSYINKALKNQLNKLEHVMLS----NL----THKPVIKLSEKLSSLTQYK-LGHCFY-GSDGASAVEVALKMSFHYWYN 120 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~~~~~----~~----~~~~~~~l~~~l~~~~~~~-~~~v~~-~~sgteA~~~al~~~~~~~~~ 120 (430)
-+|+|.+++.+.+.+....+.+ .. .....++.++.+++++++. ..+|+| |+|||+|++.+++.+. .
T Consensus 16 ~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~--- 91 (361)
T 3m5u_A 16 LPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-L--- 91 (361)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-C---
T ss_pred CcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-C---
Confidence 4799999999877543211111 11 1256678888999999764 347888 9999999999998664 1
Q ss_pred cCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCC-CCCCChhHHHHHHHHHHHHHHHhCC
Q psy14484 121 KGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNI-NKGNSANEIARCAIFDLEILLKKNH 199 (430)
Q Consensus 121 ~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~le~~l~~~~ 199 (430)
++...++.. +.+++..... ......++..++.+..... . +++. + ++
T Consensus 92 ----~~~~~~i~~-~~~~~~~~~~-----------a~~~G~~v~~~~~~~~g~~~~-----------~~~~-~--l~--- 138 (361)
T 3m5u_A 92 ----NGVCEYANT-GVWTKKAIKE-----------AQILGVNVKTVASSEESNFDH-----------IPRV-E--FS--- 138 (361)
T ss_dssp ----SSCEEEEEC-SHHHHHHHHH-----------HHHTTCCEEEEEECTTTTSCS-----------CCCC-C--CC---
T ss_pred ----CCeEEEEeC-CHHHHHHHHH-----------HHHcCCceEEEecccCcCCCc-----------CChh-h--cC---
Confidence 332222222 2333311100 0111234455554432210 0 2223 2 43
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccCCCCCceeeee--cccCCCc
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS--KGITGGY 277 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~ 277 (430)
+++++|.+.. +.+.+|.+.+. +++ +|+++++|.+|+ +|.. .+.++ ..|++++| |.+| .
T Consensus 139 ~~t~lv~~~~-~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g~~--~id~~----~~d~~~~s~~K~~g-p- 198 (361)
T 3m5u_A 139 DNADYAYICS-NNTIYGTQYQN---------YPK-TKTPLIVDASSD-FFSR--KVDFS----NIALFYGGVQKNAG-I- 198 (361)
T ss_dssp TTSSEEEEES-EETTTTEECSS---------CCC-CSSCEEEECGGG-TTSS--CCCCT----TEEEEEEETTTTSS-C-
T ss_pred CCCCEEEEeC-CCCCcceeCCc---------ccc-cCCEEEEEcccc-cCCC--CCCcc----cCCEEEEechhccC-C-
Confidence 4567777766 66667977662 344 499999999998 5432 12222 25788887 8884 2
Q ss_pred cccEEEEEcHHHHHhhhccCCcccc------cccCCC-CCCHHHHHHHHHHHHHHhhc----CHHHHHHHHHHHHHHHHH
Q psy14484 278 LPLSLVMTTDKIYNSIYYKNNINIF------LHSHSY-SGNPLACCAALATLEIFNKD----NILQRISQDMKKITKALT 346 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~~~~~~~------~~~~t~-~~~~~~~~aa~~~l~~~~~~----~~~~~~~~~~~~l~~~l~ 346 (430)
..+|++++++++.+.+.+...+..+ ....++ +++..+..+..++++++.+. +..++.+++.++++++|+
T Consensus 199 ~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~ 278 (361)
T 3m5u_A 199 SGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID 278 (361)
T ss_dssp TTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999987665430000000 012222 34566666777888877654 345677888888888887
Q ss_pred chhcC-CCeeeE-eecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEEEeCCCCCCHHHHHHHHHHH
Q psy14484 347 SLITH-PKIINF-RQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPPYILNKNEIQHMTSAI 421 (430)
Q Consensus 347 ~l~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR~~~~~~~t~e~i~~~~~~l 421 (430)
++... ...... .....++.|.++ +... . ...+...|.++||.+.++. +.+|+++...+|++||+.+++.|
T Consensus 279 ~~~g~~~~~~~~~~rs~~ivsf~~~-~~~~--~--~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al 353 (361)
T 3m5u_A 279 LSNGFYKGHADKKDRSLMNVSFNIA-KNKD--L--EPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFM 353 (361)
T ss_dssp TSTTSEEESSCGGGBCSSEEEEEES-SCTT--H--HHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHH
T ss_pred HCCCeeeccCCHHHcCCeEEEEECC-Cchh--h--hHHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHH
Confidence 76321 111111 112346667666 3111 1 1357788889999987652 56999999999999999999999
Q ss_pred HHHHHH
Q psy14484 422 FQTFNE 427 (430)
Q Consensus 422 ~~~l~~ 427 (430)
+++.++
T Consensus 354 ~~~~~~ 359 (361)
T 3m5u_A 354 KEFQGK 359 (361)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 227
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.71 E-value=9.3e-16 Score=147.80 Aligned_cols=293 Identities=8% Similarity=0.013 Sum_probs=171.7
Q ss_pred CCHHHHHHHHHHHh-h--ccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEE---cCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 51 SNSYINKALKNQLN-K--LEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY---GSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 51 ~~p~v~~a~~~~~~-~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
++++|.+++.+... . +.......+......++++.++++++ .+..++ ++||++|+..++..+..
T Consensus 30 n~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g--~e~alv~p~~~sGt~Ai~~al~all~-------- 99 (409)
T 3jzl_A 30 NQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFK--TEAALVRPQIISGTHAISTVLFGILR-------- 99 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHT--CSEEEEETTSCSHHHHHHHHHHHHCC--------
T ss_pred hHHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhC--CCcEEEECCCccHHHHHHHHHHHhcC--------
Confidence 34677777776531 1 11112224556678899999999994 455555 89999999999987754
Q ss_pred CCcEEEEEc-CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 125 NKKKFICLQ-NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 125 ~~~~vl~~~-~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++.|++.+ +.|.+..... ...+. ....+........+++...+... |+++++++++ ++++
T Consensus 100 ~GD~Vl~~~~~~y~~~~~~~-~~~g~--~~~~l~~~G~~~~~v~~~~~g~~------------d~e~l~~ai~---~~tk 161 (409)
T 3jzl_A 100 PDDELLYITGQPYDTLEEIV-GIRKQ--GQGSLKDFHIGYSSVPLLENGDV------------DFPRIAKKMT---PKTK 161 (409)
T ss_dssp TTCEEEECSSSCCTTHHHHH-TSSSS--SSSCTGGGTCEEEECCCCTTSCC------------CHHHHHHHCC---TTEE
T ss_pred CCCEEEEeCCCCcHhHHHHH-hcccc--hhhHHHHcCCEEEEeCCCCCCCc------------CHHHHHHhcc---CCCe
Confidence 567888887 7776653211 00000 00001111223344444322222 8899999885 4688
Q ss_pred EEEEccc---cccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC
Q psy14484 204 AIIIEPL---VQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG 276 (430)
Q Consensus 204 ~vi~ep~---v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG 276 (430)
+|++++. ++|++|.+.+ +++|.++|++ +|+++|+||+|..+...... .....|++ +++|.++|+
T Consensus 162 lV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~~~~~~p-----~~~g~Div~~S~sK~lgg~ 232 (409)
T 3jzl_A 162 MIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP-----PEVGADIIAGSLIKNPGGG 232 (409)
T ss_dssp EEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS-----GGGTCSEEEEETTSGGGTT
T ss_pred EEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccccccCCc-----cccCCeEEEECccccCCcc
Confidence 8888752 4566676655 9999999999 99999999998743211111 12235666 678999875
Q ss_pred ccc-cEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCee
Q psy14484 277 YLP-LSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII 355 (430)
Q Consensus 277 ~~~-ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 355 (430)
..+ .|++++++++++.+... ......+.+.+..+..+.++...++.+ +...++..+++.++.+.|+++. .....
T Consensus 233 ~~~~GG~v~~~~~li~~l~~~--~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g-~~v~p 307 (409)
T 3jzl_A 233 LAKTGGYIAGKEALVDLCGYR--LTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEFG-VEADP 307 (409)
T ss_dssp TCSSCEEEEECHHHHHHHHHH--HSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-CEEES
T ss_pred CCceEEEEEeCHHHHHHHHHH--hccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhCC-CcccC
Confidence 333 58899999998877640 000001111222221122333344332 3456667778888888888762 11100
Q ss_pred --eEeecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 356 --NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 356 --~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
..+....++.+.+. + .+.+.++++.|.+..
T Consensus 308 ~~~~~~~~~i~~i~l~-~-----~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 308 VWDAPRTDLIQSVSFH-N-----KEKMVAFAQAIQAAS 339 (409)
T ss_dssp CTTSCCSSSCCEEECS-C-----HHHHHHHHHHHHHTS
T ss_pred CCCCCCccEEEEEEeC-C-----HHHHHHHHHHHHhcC
Confidence 11122336666665 3 222568899988774
No 228
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.70 E-value=3.7e-17 Score=156.09 Aligned_cols=327 Identities=9% Similarity=0.010 Sum_probs=189.4
Q ss_pred CEEEecccccccccCCCCCHHHHHHHHHHHhhcccccc--------CCCCCHHHHHHHHHHHhhcCCCC-CeEEE-cCCc
Q psy14484 34 KRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVML--------SNLTHKPVIKLSEKLSSLTQYKL-GHCFY-GSDG 103 (430)
Q Consensus 34 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~~~-~~v~~-~~sg 103 (430)
+.|+|..+.. .-+|+|++++.+.+.+....+. ........++.++.+++++++.. .+|+| ++||
T Consensus 27 ~~yl~~agpt------~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~ 100 (386)
T 3qm2_A 27 QVFNFSSGPA------MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGG 100 (386)
T ss_dssp CCEECCSSSC------CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCT
T ss_pred cCccccCCCC------CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCc
Confidence 4677754431 2489999999877644221111 11123455788889999998643 47888 6999
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCCC--CCCCCCCCCChh
Q psy14484 104 ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSAN 181 (430)
Q Consensus 104 teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 181 (430)
|+|++.+++.+.. +++++++...+.+++...... .... ++..++.+ ......
T Consensus 101 T~a~n~ai~~l~~--------~gd~v~~~~~~~~~~~~~~~a-----------~~~G-~v~~v~~~~~~~G~~~------ 154 (386)
T 3qm2_A 101 RGQFAGVPLNLLG--------DKTTADYVDAGYWAASAIKEA-----------KKYC-APQIIDAKITVDGKRA------ 154 (386)
T ss_dssp THHHHHHHHHHCT--------TCCEEEEEESSHHHHHHHHHH-----------TTTS-EEEEEECEEEETTEEE------
T ss_pred hHHHHHHHHhccC--------CCCeEEEEeCCHHHHHHHHHH-----------HHhC-CeEEEecCcccCCCCC------
Confidence 9999999987653 445665555444443211111 0112 23444443 111100
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcc-cCChHHHHHHHHHHHhcCCEEEEeccccCCCCcccccccccC
Q psy14484 182 EIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMI-MYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 260 (430)
Q Consensus 182 ~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~-~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~~g~~~~~~~~ 260 (430)
+++++++.++ +++++|.+.. +.+.+|.+ .| +++|. +|+++++|.+|+ +|.. .+.++.+
T Consensus 155 -----~~~~~~~~l~---~~t~lV~~~h-~et~tG~~i~p----i~~i~-----~g~~~~vDa~qs-~g~~--pidv~~~ 213 (386)
T 3qm2_A 155 -----VKPMREWQLS---DNAAYLHYCP-NETIDGIAIDE----TPDFG-----PEVVVTADFSST-ILSA--PLDVSRY 213 (386)
T ss_dssp -----ECCGGGCCCC---TTCSCEEECS-EETTTTEECCC----CCCCC-----TTCCEEEECTTT-TTSS--CCCGGGC
T ss_pred -----CchHHHhhcC---CCCcEEEEEC-CcCCcCEecCc----hhhhc-----CCCEEEEEcccc-cCCC--CCCcccc
Confidence 3445555553 5677787777 66777985 65 55553 799999999997 5432 2334433
Q ss_pred CCCCceeeee--cccCCCccccEEEEEcHHHHHhhhccCCcccc------cccCCC-CCCHHHHHHHHHHHHHHhh----
Q psy14484 261 EIWPDFLCLS--KGITGGYLPLSLVMTTDKIYNSIYYKNNINIF------LHSHSY-SGNPLACCAALATLEIFNK---- 327 (430)
Q Consensus 261 ~~~~d~~~~s--K~l~gG~~~ig~~~~~~~~~~~~~~~~~~~~~------~~~~t~-~~~~~~~~aa~~~l~~~~~---- 327 (430)
+ ++++| |.+| . ..+|++++++++.+.+.+. .+..+ .....+ +.+..+..+..++++.+.+
T Consensus 214 ~----~~~~s~hK~lG-P-~G~g~l~v~~~~~~~~~~~-~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~ 286 (386)
T 3qm2_A 214 G----VIYAGAQKNIG-P-AGLTLVIVREDLLGKAHES-CPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGV 286 (386)
T ss_dssp S----EEEEETTTTTC-C-TTEEEEEEEGGGCSCCCTT-SCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHH
T ss_pred C----EEEEecccccC-C-CccEEEEECHHHHhhhccc-CCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCH
Confidence 3 44455 8884 2 4699999999875443320 00000 001111 2344455555566665543
Q ss_pred cCHHHHHHHHHHHHHHHHHchhcC--CCeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCcEEeecC---CEEE
Q psy14484 328 DNILQRISQDMKKITKALTSLITH--PKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG---NTVY 402 (430)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~l~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv~~~~~~---~~lR 402 (430)
++..++.+++.+++++.|+++ .. +..........++.|.++ +.. . ...+...|.++||.+..+. +.+|
T Consensus 287 ~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~-~~~---~--~~~~~~~L~~~gI~~~~g~~~~~~iR 359 (386)
T 3qm2_A 287 AAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLA-DNT---L--DKVFLEESFAAGLHALKGHRVVGGMR 359 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEES-SGG---G--HHHHHHHHHHTTEECCBCCTTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECC-Ccc---c--cHHHHHHHHHCCCEEeCCCCCcCeEE
Confidence 345677788888888888876 21 101111112346667665 311 1 1356777889999987652 4699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 403 LMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 403 ~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
+++...+|++||+.+++.|+++.++
T Consensus 360 iS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 360 ASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988764
No 229
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.69 E-value=1.8e-15 Score=155.24 Aligned_cols=306 Identities=11% Similarity=0.015 Sum_probs=174.7
Q ss_pred CHHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 76 HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 76 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
.....++++.++++++.+ ..+++++|+++|+.+++.+++. +++.||+..++|+......+..++.
T Consensus 172 ~~~i~e~e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~--------pGD~VLv~~~~H~S~~~~~~~l~Ga------ 236 (730)
T 1c4k_A 172 EGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVS--------NGDLVLFDRNNHKSVYNSALAMAGG------ 236 (730)
T ss_dssp BTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCC--------TTCEEEEETTCCHHHHHHHTTTTCC------
T ss_pred hHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcC--------CCCEEEEcCCchHHHHHHHHHHCCC------
Confidence 356789999999999643 3466667777999999988764 5678888877765443221222221
Q ss_pred hhccCCCeeEeCCC-CCCCCCCCCChhHHHHHHHHHH-----HHHHHhC-CC---C----eEEEEEccccccCCCcccCC
Q psy14484 156 YTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDL-----EILLKKN-HN---K----IAAIIIEPLVQCAGGMIMYD 221 (430)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l-----e~~l~~~-~~---~----~~~vi~ep~v~~~~G~~~~~ 221 (430)
..++++.. +.+..... .|+++| ++++++. ++ . ..+++++| +.+|.+.+
T Consensus 237 ------~~v~v~~~~~~~~i~g~--------id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p---n~~G~v~d- 298 (730)
T 1c4k_A 237 ------RPVYLQTNRNPYGFIGG--------IYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG---TYDGTIYN- 298 (730)
T ss_dssp ------EEEEECEEECTTCCEEE--------ECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB---CTTSEEEC-
T ss_pred ------EEEEEeCCccccCccCC--------CCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC---CCCCeecC-
Confidence 11122111 00000000 034444 8888643 10 1 23444455 35787777
Q ss_pred hHHHHHHHHHHHhcCCEEEEeccccC-CCCccc---cccc--ccCCCC-Cc-ee--eeecccCCCcccc-EEEEEcHHHH
Q psy14484 222 SIYLKLVREICNNYNIHLIADEIAVG-CGRTGK---FFAC--EHAEIW-PD-FL--CLSKGITGGYLPL-SLVMTTDKIY 290 (430)
Q Consensus 222 ~~~l~~l~~l~~~~gi~li~DEv~~g-~g~~g~---~~~~--~~~~~~-~d-~~--~~sK~l~gG~~~i-g~~~~~~~~~ 290 (430)
+++|.++|+++|+++|+||+|.+ +...+. ..+. +.++.. ++ ++ +++|+++| .+. |+++.+++.+
T Consensus 299 ---l~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g--~~~gg~I~v~~~~l 373 (730)
T 1c4k_A 299 ---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG--FSQTSQIHKKDSHI 373 (730)
T ss_dssp ---HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC--CTTCEEEEEECGGG
T ss_pred ---HHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCC--CCCEEEEEecchhh
Confidence 99999999999999999999863 111111 0111 122332 11 44 56798875 343 5565554322
Q ss_pred ---------HhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHc-hhcCCCeee-
Q psy14484 291 ---------NSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTS-LITHPKIIN- 356 (430)
Q Consensus 291 ---------~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~- 356 (430)
..+.. ......+.+++...+++..++++++.. .++.+++.++.+++++.|++ +..+..+..
T Consensus 374 ~g~~~~i~~~~~~~-----~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~ 448 (730)
T 1c4k_A 374 KGQLRYCDHKHFNN-----SFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPP 448 (730)
T ss_dssp TTSTTCCCHHHHHH-----HHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCS
T ss_pred cCcccccCHHHHHH-----HHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccc
Confidence 11111 001112234455555555556665433 45677888889999999976 322211100
Q ss_pred E--------------------------------e--ecce-E-----EEEEEeec--------CCccchhHHHHHHHHHH
Q psy14484 357 F--------------------------------R--QKGM-I-----WAFDVIIE--------DPEQIETFSKKFFVAAL 388 (430)
Q Consensus 357 ~--------------------------------~--~~g~-~-----~~~~~~~~--------~~~~~~~~a~~~~~~l~ 388 (430)
. . ..+. + +.+..+ . ...... +..+.+.|.
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~p-g~~~~~g~~~~~g~~--~~~l~~~L~ 525 (730)
T 1c4k_A 449 VVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTP-GINPETGDYEDFGVP--ATIVANYLR 525 (730)
T ss_dssp EETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECS-SEETTTTEECSSCCC--HHHHHHHHH
T ss_pred ccccccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeC-CcccccccccccCCC--HHHHHHHHH
Confidence 0 0 0111 1 233331 1 000011 467899999
Q ss_pred HCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 389 KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 389 ~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++||.+...+ ..+|++++..+|+++++.++++|+++.++
T Consensus 526 e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~ 565 (730)
T 1c4k_A 526 DHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQRL 565 (730)
T ss_dssp HTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999987754 78999999999999999999999988654
No 230
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.69 E-value=4.5e-15 Score=143.53 Aligned_cols=293 Identities=11% Similarity=0.054 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHh---hccccccCCCCCHHHHHHHHHHHhhcCCCCCeEEE---cCCchHHHHHHHHHHHHhhhhcCCCCC
Q psy14484 53 SYINKALKNQLN---KLEHVMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY---GSDGASAVEVALKMSFHYWYNKGFLNK 126 (430)
Q Consensus 53 p~v~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~sgteA~~~al~~~~~~~~~~g~~~~ 126 (430)
++|++++.+... .+.......+......++++.++++++ .+..++ ++||++|+..++..++. ++
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g--~e~alv~p~~~sGt~Ai~~al~all~--------pG 115 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFN--TESALVRPHFVNGTHALGAALFGNLR--------PG 115 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHT--CSEEEEETTCCSHHHHHHHHHHHHCC--------TT
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhC--CcceEEeCCCccHHHHHHHHHHHHhC--------CC
Confidence 567777665421 111111123455678899999999995 444455 89999999999887754 66
Q ss_pred cEEEEEc-CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14484 127 KKFICLQ-NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205 (430)
Q Consensus 127 ~~vl~~~-~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~v 205 (430)
+.|++.+ +.|++..... ...... ....+.........++...+... |+++++++++++ +++++|
T Consensus 116 D~Vl~~~~~~y~~~~~~~-g~~~~~-~~~~l~~~G~~~~~v~~~~~g~~------------D~e~l~~~l~~~-~~tklV 180 (427)
T 3i16_A 116 NTMLSVCGEPYDTLHDVI-GITENS-NMGSLKEFGINYKQVDLKEDGKP------------NLEEIEKVLKED-ESITLV 180 (427)
T ss_dssp CEEEESSSSCCGGGHHHH-TCSCCC-SSCCTGGGTCEEEECCCCTTSSC------------CHHHHHHHHHTC-TTEEEE
T ss_pred CEEEEeCCCccHHHHHHH-hccccc-hHHHHHHcCCEEEEecCccCCCc------------CHHHHHHHhhCC-CCCEEE
Confidence 8888887 7777653221 000000 00001111223344444322222 889999999742 467888
Q ss_pred EEccc---cccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCCc-
Q psy14484 206 IIEPL---VQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGGY- 277 (430)
Q Consensus 206 i~ep~---v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG~- 277 (430)
++++. ++|++|.+.+ +++|.++|++ +|+++|+||+|..+....... ....|++ +++|.++|+.
T Consensus 181 ~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~-----~~gaDiv~~S~sK~lgg~g~ 251 (427)
T 3i16_A 181 HIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT-----DVGADLIAGSLIKNIGGGIA 251 (427)
T ss_dssp EEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG-----GGTCSEEEEETTSGGGTTTC
T ss_pred EEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCcc-----ccCCeEEEecCcccCCCCCC
Confidence 88762 3456666655 9999999999 999999999987442121111 1234655 6789998753
Q ss_pred cccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhc--CCCe
Q psy14484 278 LPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLA-CCAALATLEIFNKDNILQRISQDMKKITKALTSLIT--HPKI 354 (430)
Q Consensus 278 ~~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~-~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~ 354 (430)
...|++++++++++.+... ......+...+. .+. +..+...++.+ +...++..+++.++.+.|+++.. .|.
T Consensus 252 ~~gG~i~~~~~li~~l~~~--~~~~~~g~~~~~-~~~~a~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g~~V~p~- 325 (427)
T 3i16_A 252 PTGGYLAGTKDCIEKTSYR--LTVPGIGGECGS-TFGVVRSMYQGLFLA--PHISMEALKGAILCSRIMELAGFEVMPK- 325 (427)
T ss_dssp CSCEEEEECHHHHHHHHHH--HSCTTTGGGCCC-CTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCEEESC-
T ss_pred ceEEEEEECHHHHHHHHHh--cccCccCccCCc-cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCeecCC-
Confidence 3468899999998877640 000001111111 011 22222333322 34566777788888888877621 111
Q ss_pred eeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCC
Q psy14484 355 INFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391 (430)
Q Consensus 355 ~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~G 391 (430)
...+....++.+.+. + .+.+.+|++.|....
T Consensus 326 ~~~~~~~~i~~i~l~-~-----~~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 326 YDEKRSDIIQSIKFN-D-----KDKLIEFCKGIQTGS 356 (427)
T ss_dssp TTSCCSSSCEEEECS-S-----HHHHHHHHHHHHHTC
T ss_pred CCCCCccEEEEEEEC-C-----HHHHHHHHHHHhhcC
Confidence 001122236677665 3 222568899988763
No 231
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.68 E-value=2.1e-15 Score=155.98 Aligned_cols=310 Identities=8% Similarity=0.012 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIY 156 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~ 156 (430)
....++++.++++++.+ +.+++++|+++|+..++.+++. +++.|++..++|+..... +...+
T Consensus 205 g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~--------~GD~Vlv~~~~h~s~~~~-~~~~G-------- 266 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMT--------DNDVVVVDRNCHKSIEQG-LMLTG-------- 266 (755)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCC--------TTCEEEEESSCCHHHHHH-HHHHC--------
T ss_pred cHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcC--------CCCEEEECCCchHHHHHH-HHHcC--------
Confidence 45567788888888633 3566777778999999998764 667888888776543322 22122
Q ss_pred hccCCCeeEeCCCCC-CCCCCCCChhHHHHHHHHHHHHHHHhCCCC-------e-EEEEEccccccCCCcccCChHHHHH
Q psy14484 157 TSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNK-------I-AAIIIEPLVQCAGGMIMYDSIYLKL 227 (430)
Q Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~~~-------~-~~vi~ep~v~~~~G~~~~~~~~l~~ 227 (430)
...++++...+ +......+.+. .|+++|++++++++.. + .+++++| +.+|.+.+ +++
T Consensus 267 ----~~~v~v~~~~~~~g~~g~i~~~~---~d~e~le~~i~~~~~~k~~~~~~~klvil~~p---n~~G~v~d----l~~ 332 (755)
T 2vyc_A 267 ----AKPVYMVPSRNRYGIIGPIYPQE---MQPETLQKKISESPLTKDKAGQKPSYCVVTNC---TYDGVCYN----AKE 332 (755)
T ss_dssp ----CEEEEECCCBCTTSCBCCCCGGG---GSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS---CTTSEEEC----HHH
T ss_pred ----CEEEEEeCCCCccccccccCcCC---CCHHHHHHHHHhCccccccccCCCeEEEEECC---CCCceecC----HHH
Confidence 11223332211 00000000011 1678999999764221 1 3455555 45787777 999
Q ss_pred HHHHHHhcCCEEEEeccccCCCCccccc-cccc-CC--CC---Cc---eeeeecccCCCccc-cEEEEEcHH--HH--Hh
Q psy14484 228 VREICNNYNIHLIADEIAVGCGRTGKFF-ACEH-AE--IW---PD---FLCLSKGITGGYLP-LSLVMTTDK--IY--NS 292 (430)
Q Consensus 228 l~~l~~~~gi~li~DEv~~g~g~~g~~~-~~~~-~~--~~---~d---~~~~sK~l~gG~~~-ig~~~~~~~--~~--~~ 292 (430)
|.++|++||+++|+||+|.+....+..+ .... .+ .. +. +.+++|+++| .+ .|+++++++ .. ..
T Consensus 333 I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g--~~~g~~i~~~~~~~~i~~~~ 410 (755)
T 2vyc_A 333 AQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIHVREGRGAINFSR 410 (755)
T ss_dssp HHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC--CTTCEEEEEECCBTCCCHHH
T ss_pred HHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccC--cCCeeeeeecCcccccCHHH
Confidence 9999999999999999997431111111 0111 22 11 11 2356798876 33 566767554 11 12
Q ss_pred hhccCCcccccccCCCCCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhc---------CCCee--eEe
Q psy14484 293 IYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLIT---------HPKII--NFR 358 (430)
Q Consensus 293 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~---------~~~~~--~~~ 358 (430)
+.. ......+.+++.+.+++..++++.+.. +++.++..++.++++++|+++.. +..+. .+.
T Consensus 411 ~~~-----~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~ 485 (755)
T 2vyc_A 411 FNQ-----AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVT 485 (755)
T ss_dssp HHH-----HHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEE
T ss_pred HHH-----HHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcc
Confidence 221 011122334566666666667776643 35788888999999999987633 11100 010
Q ss_pred e---------------------------------------cc------eEEEEEEeecCCccc-----hhHHHHHHHHHH
Q psy14484 359 Q---------------------------------------KG------MIWAFDVIIEDPEQI-----ETFSKKFFVAAL 388 (430)
Q Consensus 359 ~---------------------------------------~g------~~~~~~~~~~~~~~~-----~~~a~~~~~~l~ 388 (430)
+ .| ..+.+... ....+. .--+..+.+.|.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~-~~~~~G~~~~~g~~~~~l~~~L~ 564 (755)
T 2vyc_A 486 DPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAP-GMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_dssp CTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECS-CBCTTSSBCSSCCCHHHHHHHHH
T ss_pred ccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcC-CCCCCCCccccCCcHHHHHHHHH
Confidence 0 11 22333332 100000 000357888898
Q ss_pred HCCcEEeecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q psy14484 389 KNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 389 ~~Gv~~~~~~-~~lR~~~~~~~t~e~i~~~~~~l~~~l~ 426 (430)
++||.+...+ +.+|+.+++..|+++++.++++|.+..+
T Consensus 565 ~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 565 RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp TTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHH
T ss_pred HCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 8999887554 7899999999999999999999988764
No 232
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.67 E-value=1.1e-14 Score=140.77 Aligned_cols=294 Identities=11% Similarity=0.033 Sum_probs=168.9
Q ss_pred CCHHHHHHHHHHHhhccc---cccCCCCCHHHHHHHHHHHhhcCCCCCeEEE---cCCchHHHHHHHHHHHHhhhhcCCC
Q psy14484 51 SNSYINKALKNQLNKLEH---VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFY---GSDGASAVEVALKMSFHYWYNKGFL 124 (430)
Q Consensus 51 ~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~sgteA~~~al~~~~~~~~~~g~~ 124 (430)
+.++|.+++.+....-.+ .....+.....+++++.++++++ .+..++ ++||++|+..++..+..
T Consensus 45 n~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g--~e~alv~p~~~sGt~A~~~al~all~-------- 114 (427)
T 3hvy_A 45 NQLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFN--TESAFVRPHFVNGTHAIGAALFGNLR-------- 114 (427)
T ss_dssp HHHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHT--CSEEEEETTCCSHHHHHHHHHHHTCC--------
T ss_pred hHHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhC--CCceEEeCCCCcHHHHHHHHHHHhcC--------
Confidence 346777777764321111 11123445667889999999994 455566 89999999999887754
Q ss_pred CCcEEEEEc-CCCCCcchhhhccCCCccchhhhhccCCCeeEeCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeE
Q psy14484 125 NKKKFICLQ-NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203 (430)
Q Consensus 125 ~~~~vl~~~-~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 203 (430)
+++.|++.+ +.|++..... ..... .+...+.........++. ++... |+++++++++++ ++++
T Consensus 115 pGD~Vl~~~~~~y~~~~~~~-g~~~~-~~~~~l~~~G~~~~~v~~-~~~~~------------d~e~l~~~i~~~-~~tk 178 (427)
T 3hvy_A 115 PNDTMMSICGMPYDTLHDII-GMDDS-KKVGSLREYGVKYKMVDL-KDGKV------------DINTVKEELKKD-DSIK 178 (427)
T ss_dssp TTCEEEECSSSCCGGGHHHH-TCCTT-CCSCCTGGGTCEEEECCC-BTTBC------------CHHHHHHHHHHC-TTEE
T ss_pred CCCEEEEeCCCCchhHHHHh-ccccc-hhhhHHHHcCCEEEEecC-CCCCc------------CHHHHHHHhhCC-CCCE
Confidence 678899888 7887653111 00000 000001111223334443 22222 889999999742 4688
Q ss_pred EEEEccc---cccCCCcccCChHHHHHHHHHHHh--cCCEEEEeccccCCCCcccccccccCCCCCcee--eeecccCCC
Q psy14484 204 AIIIEPL---VQCAGGMIMYDSIYLKLVREICNN--YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL--CLSKGITGG 276 (430)
Q Consensus 204 ~vi~ep~---v~~~~G~~~~~~~~l~~l~~l~~~--~gi~li~DEv~~g~g~~g~~~~~~~~~~~~d~~--~~sK~l~gG 276 (430)
+|++++. ++|++|.+.+ +++|.++|++ +|+++|+||+|..+....... ....|++ +++|.++|+
T Consensus 179 lV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~-----~~gaDiv~~S~sK~lgg~ 249 (427)
T 3hvy_A 179 LIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT-----DVGADIIAGSLIKNIGGG 249 (427)
T ss_dssp EEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG-----GGTCSEEEEETTSGGGTT
T ss_pred EEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCCc-----ccCCeEEEECCccccccc
Confidence 8888762 3455565544 9999999999 899999999987442121111 1234655 678999875
Q ss_pred cc-ccEEEEEcHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHchhcCCCee
Q psy14484 277 YL-PLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII 355 (430)
Q Consensus 277 ~~-~ig~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 355 (430)
.. ..|++++++++++.+... ......+.+.+..+..+..+...++.+ +...++..+++.++.+.|+++. .....
T Consensus 250 g~~~GG~i~~~~~li~~l~~~--~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la~~L~~~g-~~V~p 324 (427)
T 3hvy_A 250 IATTGGYIAGKEEYVTQATFR--VTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCARIMELAG-FDVLP 324 (427)
T ss_dssp TCCSCEEEEECHHHHHHHHHH--HSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-CEEES
T ss_pred ccceEEEEEECHHHHHHHHHH--hhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhCC-CeecC
Confidence 32 357889999998877640 000001111111111122233333322 3456677778888888887762 11100
Q ss_pred --eEeecceEEEEEEeecCCccchhHHHHHHHHHHHC
Q psy14484 356 --NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN 390 (430)
Q Consensus 356 --~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~ 390 (430)
..+...+++.+.+. + .+.+.++++.|...
T Consensus 325 ~~~~~~~~li~~~~l~-~-----~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 325 KYNDKRTDIIQAIKFN-D-----EKKLIDFIKGIQTA 355 (427)
T ss_dssp CTTSCCSSSEEEEECS-S-----HHHHHHHHHHHHHT
T ss_pred CCCCCCceEEEEEeCC-C-----HHHHHHHHHHhccc
Confidence 11122236666665 3 22256788888775
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.55 E-value=1.6e-12 Score=123.30 Aligned_cols=287 Identities=12% Similarity=0.123 Sum_probs=170.5
Q ss_pred CeEEEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhhhhccCCCeeEeCC---CCC
Q psy14484 95 GHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT---PDS 171 (430)
Q Consensus 95 ~~v~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 171 (430)
...+++|++|.++.+++.+++... .|+.++||+ +..-|-+..-++.+.+... ++++. ++.
T Consensus 135 ~~~flVnGsTgg~lamilaa~r~~----rpg~d~VIv-pRn~HKSv~kAliL~Gl~P------------v~V~p~~d~~~ 197 (501)
T 3hl2_A 135 ANCFVVPMATGMSLTLCFLTLRHK----RPKAKYIIW-PRIDQKSCFKSMITAGFEP------------VVIENVLEGDE 197 (501)
T ss_dssp CEEEEESSCHHHHHHHHHHHHHHH----CTTCCEEEE-ECCCCHHHHHHHHHTTCEE------------EEECEEEETTE
T ss_pred CcEEEECcHHHHHHHHHHHHcCcc----cCCCCEEEE-ecchHHHHHHHHHHcCCeE------------EEEeeeecccc
Confidence 358888899888888777766531 123356665 7888887766666555211 12211 111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 172 RNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
.. .|++++|++|++++ +.+.+|+.++ ...-++...+ +++|.++|++||+++||||+|...-.
T Consensus 198 ~~------------id~e~le~aI~e~ga~~i~~V~~Tt-t~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~ 260 (501)
T 3hl2_A 198 LR------------TDLKAVEAKVQELGPDCILCIHSTT-SCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSS 260 (501)
T ss_dssp EE------------ECHHHHHHHHHHHCGGGEEEEEEEC-SCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCH
T ss_pred cC------------CCHHHHHHHHHhcCCCcEEEEEecC-CCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhh
Confidence 11 18899999999874 5677777766 4443444455 99999999999999999999864421
Q ss_pred cccccccccCCC-CCceeeee--cccCCCccccEE--EEE-cHHHHHhhhccCCcccccccCCCCCCHHHHHHHHHHHHH
Q psy14484 251 TGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSL--VMT-TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324 (430)
Q Consensus 251 ~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~--~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~ 324 (430)
....+..+.+.. ..|+++.| |.+- .|+|. ++. .+++++.+.. .+.++.++.|. +..+.++..
T Consensus 261 ~~~~lp~sA~~~GrAD~vVqS~HK~ll---vpIGG~ii~~~d~e~l~~~~~-------~yPGr~S~Sps--ldl~~tLL~ 328 (501)
T 3hl2_A 261 KCMHLIQQGARVGRIDAFVQSLDKNFM---VPVGGAIIAGFNDSFIQEISK-------MYPGRASASPS--LDVLITLLS 328 (501)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEHHHHHC---CCSSCEEEEESCHHHHHHHHH-------TSCSCBCSHHH--HHHHHHHHH
T ss_pred hhhhhHHHHHhcCCCcEEEecccccce---eecCceEEEeCCHHHHHHHHH-------hCCCCCCCcHH--HHHHHHHHH
Confidence 111111122223 37999888 5432 34432 333 4566666544 12233333333 323344433
Q ss_pred Hhh---cCHHHHHHHHHHHHHHHHHch-hcCC-CeeeEeecceEEEEEEeecCCccchhHHHHHHHHHHHCCc---EEee
Q psy14484 325 FNK---DNILQRISQDMKKITKALTSL-ITHP-KIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNEL---LLRP 396 (430)
Q Consensus 325 ~~~---~~~~~~~~~~~~~l~~~l~~l-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~l~~~Gv---~~~~ 396 (430)
+.. .++.++..++.++|++.|+++ ..++ .+...+....-+++.+. ............|...|..++| -+.+
T Consensus 329 lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~-~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~ 407 (501)
T 3hl2_A 329 LGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLK-TLDEHRDKAVTQLGSMLFTRQVSGARVVP 407 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECT-TSCTTTSCHHHHHHHHHHHTTCCSCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecc-cccccccccHHHHHHHHHhcCCCcceeec
Confidence 333 345566778899999999888 3232 12233334444555554 3211111112456666766644 2322
Q ss_pred c----------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Q psy14484 397 I----------------------GNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428 (430)
Q Consensus 397 ~----------------------~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~~ 428 (430)
. ..++-+.....++++||+.++++|++++.++
T Consensus 408 ~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~ 461 (501)
T 3hl2_A 408 LGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAV 461 (501)
T ss_dssp TTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0 1467788888899999999999999998754
No 234
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.54 E-value=4.3e-13 Score=136.54 Aligned_cols=308 Identities=8% Similarity=0.038 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEcCCc-hHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 77 KPVIKLSEKLSSLTQYKLGHCFYGSDG-ASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 77 ~~~~~l~~~l~~~~~~~~~~v~~~~sg-teA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
....++++.+++++ +.++.+|+++| +.||.+++.+++. +++.|++..++|... ..++..++..
T Consensus 195 g~i~eaE~~lA~~f--Ga~~a~~v~nGts~An~~ai~al~~--------pGD~VLv~r~~H~S~-~~~l~lsGa~----- 258 (715)
T 3n75_A 195 GPHKEAEQYIARVF--NADRSYMVTNGTSTANKIVGMYSAP--------AGSTILIDRNCHKSL-THLMMMSDVT----- 258 (715)
T ss_dssp THHHHHHHHHHHHH--TCSEEEEESSHHHHHHHHHHHHHCC--------TTCEEEEESSCCHHH-HHHHHHSCCE-----
T ss_pred HHHHHHHHHHHHHh--CCCCceEECcHHHHHHHHHHHHhCC--------CCCEEEECCCccHHH-HHHHHHcCCE-----
Confidence 45667888999999 44666655555 6999988887764 667788776665433 3333333311
Q ss_pred hhccCCCeeEeCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHhCCCC--e-EEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 156 YTSLLNKTYIITTPD-SRNINKGNSANEIARCAIFDLEILLKKNHNK--I-AAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 156 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~--~-~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.++++... .+....+.+..++ |+++|+++++++++. + .+++++| +..|.+.+ +++|.++
T Consensus 259 -------pv~v~~~~~~~gi~~~i~~~~~---d~e~Le~~l~~~~~~k~p~~vivt~p---n~~G~v~d----l~~I~el 321 (715)
T 3n75_A 259 -------PIYFRPTRNAYGILGGIPQSEF---QHATIAKRVKETPNATWPVHAVITNS---TYDGLLYN----TDFIKKT 321 (715)
T ss_dssp -------EEEECCCBCTTCCBCCCCGGGG---SHHHHHHHHHHSTTCCSCSEEEEESS---CTTSEEEC----HHHHHHH
T ss_pred -------EEEEeccccccccccCcccccC---CHHHHHHHHhhCcCccCceEEEEECC---CCCCccCC----HHHHHHH
Confidence 12222111 1110000111111 689999999876422 1 3444444 67887777 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccc-cccC--CCCCcee-----eeecccCCCccccEEEEEcHHHH-HhhhccCCcccc
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFA-CEHA--EIWPDFL-----CLSKGITGGYLPLSLVMTTDKIY-NSIYYKNNINIF 302 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~-~~~~--~~~~d~~-----~~sK~l~gG~~~ig~~~~~~~~~-~~~~~~~~~~~~ 302 (430)
|++++ +|+||+|.+...-+..+. .... +..+|++ +++|++++- ...|++.++.++. +.+.. ..
T Consensus 322 a~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~-----~~ 393 (715)
T 3n75_A 322 LDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNE-----AY 393 (715)
T ss_dssp CCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCCHHHHHH-----HH
T ss_pred hCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchhhHHHHHH-----HH
Confidence 98774 799999973311122111 1111 2225643 577998761 1346777765431 12221 11
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHHHHchhc-CCC-----ee--eEe-------------
Q psy14484 303 LHSHSYSGNPLACCAALATLEIFN---KDNILQRISQDMKKITKALTSLIT-HPK-----II--NFR------------- 358 (430)
Q Consensus 303 ~~~~t~~~~~~~~~aa~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~l~~-~~~-----~~--~~~------------- 358 (430)
....|.+++++.+++..+++++++ .+++.+++.++.+++++.|+++.. .+. +. .+.
T Consensus 394 ~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 473 (715)
T 3n75_A 394 MMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTW 473 (715)
T ss_dssp HHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCT
T ss_pred HhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCccccc
Confidence 123344567777777777887764 256789999999999999987732 100 00 000
Q ss_pred ------ecc------eEEEEEEeecCCccc----hh-HHHHHHHHHHHCCcEEeec-CCEEEEeCCCCCCHHHHHHHHHH
Q psy14484 359 ------QKG------MIWAFDVIIEDPEQI----ET-FSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSA 420 (430)
Q Consensus 359 ------~~g------~~~~~~~~~~~~~~~----~~-~a~~~~~~l~~~Gv~~~~~-~~~lR~~~~~~~t~e~i~~~~~~ 420 (430)
+.+ +=+.+... .-..+. .. .+..+.+.|.++||.+.-+ ...+-+.++...|+++++.++++
T Consensus 474 ~gf~~~~~~~~~~Dp~Kl~i~~~-~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~a 552 (715)
T 3n75_A 474 HGFKNIDNEHMYLDPIKVTLLTP-GMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRA 552 (715)
T ss_dssp TCCTTCCSSSEEECTTEEEEECS-CBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHH
T ss_pred ccccccccCcccCCCeEEEEEcC-CCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 000 11122221 100000 00 0356788888899988765 46777888889999999999999
Q ss_pred HHHHHH
Q psy14484 421 IFQTFN 426 (430)
Q Consensus 421 l~~~l~ 426 (430)
|.+.-+
T Consensus 553 L~~~~~ 558 (715)
T 3n75_A 553 LTDFKR 558 (715)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987643
No 235
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.44 E-value=6.4e-11 Score=113.78 Aligned_cols=303 Identities=11% Similarity=0.061 Sum_probs=164.7
Q ss_pred HHHHHHHHHHhhcCCCC-CeEEEcCCch-HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchhh
Q psy14484 78 PVIKLSEKLSSLTQYKL-GHCFYGSDGA-SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEI 155 (430)
Q Consensus 78 ~~~~l~~~l~~~~~~~~-~~v~~~~sgt-eA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~~ 155 (430)
....+..++.+.++.+. ...++++|+| .++..++.+++... ++.+.||+. ..-|-+..-++.+.+..
T Consensus 99 ~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~-----~~~~~viv~-r~aHkSv~kAl~l~Gl~----- 167 (450)
T 3bc8_A 99 ITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKR-----PKAKYIIWP-RIDQKSCFKSMVTAGFE----- 167 (450)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHC-----TTCCEEEEE-CCCCHHHHHHHHHTTCE-----
T ss_pred HHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhh-----cCCCEEEEE-CCcHHHHHHHHHHcCCe-----
Confidence 34456666666665332 3458899998 44454555555421 123455554 56887766555555421
Q ss_pred hhccCCCeeEeCC---CCCCCCCCCCChhHHHHHHHHHHHHHHHhCC-CCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 156 YTSLLNKTYIITT---PDSRNINKGNSANEIARCAIFDLEILLKKNH-NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 156 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.++++. ++..+. |+++|+++|++++ +.+++|++.| ....+|...+ +++|.++
T Consensus 168 -------p~~v~~~~~~~~~~i------------d~~~le~aI~~~~~~~~~~Vv~t~-t~~g~g~~dd----l~~Ia~i 223 (450)
T 3bc8_A 168 -------PVVIENVLEGDELRT------------DLKAVEAKIQELGPEHILCLHSTT-ACFAPRVPDR----LEELAVI 223 (450)
T ss_dssp -------EEEECCEEETTEEEC------------CHHHHHHHHHHHCGGGEEEEEEES-SCCTTBCCCC----HHHHHHH
T ss_pred -------eEEEEeeecCccCCc------------CHHHHHHHHHhcCCCCEEEEEEEC-CcCCCceecC----HHHHHHH
Confidence 122211 111121 8999999998875 5788888887 5555555666 9999999
Q ss_pred HHhcCCEEEEeccccCCCCcccccccccCCC-CCceeeee--cccCCCccccEEEEE-cHHHHHhhhccCCcccccccCC
Q psy14484 232 CNNYNIHLIADEIAVGCGRTGKFFACEHAEI-WPDFLCLS--KGITGGYLPLSLVMT-TDKIYNSIYYKNNINIFLHSHS 307 (430)
Q Consensus 232 ~~~~gi~li~DEv~~g~g~~g~~~~~~~~~~-~~d~~~~s--K~l~gG~~~ig~~~~-~~~~~~~~~~~~~~~~~~~~~t 307 (430)
|++||+++||||+|.+..+....+..+.... ..|.+++| |.+..- ...+.+.. .++..+.+.. . +..+
T Consensus 224 a~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~-~~~~~l~~rd~~~~~~~~~------~-~~g~ 295 (450)
T 3bc8_A 224 CANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP-VGGAIIAGFNEPFIQDISK------M-YPGR 295 (450)
T ss_dssp HHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCC-SSCEEEEESCHHHHHHHHH------H-SCSC
T ss_pred HHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCch-hccEEEEecCHHHHHHHHH------H-hhcC
Confidence 9999999999999875422111111111111 46888887 655432 34456665 4555555443 1 1111
Q ss_pred CCCCHHHHHHHHHHHHHHhhcCH---HHHHHHHHHHHHHHHHchh---cCCCeeeEeecceEEEEEEeecCCccchhHHH
Q psy14484 308 YSGNPLACCAALATLEIFNKDNI---LQRISQDMKKITKALTSLI---THPKIINFRQKGMIWAFDVIIEDPEQIETFSK 381 (430)
Q Consensus 308 ~~~~~~~~~aa~~~l~~~~~~~~---~~~~~~~~~~l~~~l~~l~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~ 381 (430)
-+.+| ++. .+.++..+..+.+ .++..++.+++++.++++. ....+. .+..+.-..+.+. .-.........
T Consensus 296 ~s~Sp-sL~-l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~-~~~~~~~~~~~l~-~~~~~~~~D~t 371 (450)
T 3bc8_A 296 ASASP-SLD-VLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ-TPHNPISLAMTLK-TIDGHHDKAVT 371 (450)
T ss_dssp BCSHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC-CTTCSSEEEEECT-TTSSSSSCHHH
T ss_pred CcccH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC-CccCCCcceeecc-cccccccCCCc
Confidence 12233 222 2233322222333 3333667788888888774 322221 1111111222222 10000000013
Q ss_pred HHHHHHHHCC---cEEe-------------e---------cCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q psy14484 382 KFFVAALKNE---LLLR-------------P---------IGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427 (430)
Q Consensus 382 ~~~~~l~~~G---v~~~-------------~---------~~~~lR~~~~~~~t~e~i~~~~~~l~~~l~~ 427 (430)
++.-.+...| .-+. . ....+-+..+...+++++++++++|+++..+
T Consensus 372 kl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~ 442 (450)
T 3bc8_A 372 QLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 442 (450)
T ss_dssp HHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 4444454443 3322 1 1257788889899999999999999988653
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.85 E-value=1.9e-07 Score=88.43 Aligned_cols=296 Identities=12% Similarity=0.078 Sum_probs=157.0
Q ss_pred HHHHH-HHHHhhcCCCCCeE---EEcCCchHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCcchhhhccCCCccchh
Q psy14484 79 VIKLS-EKLSSLTQYKLGHC---FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKE 154 (430)
Q Consensus 79 ~~~l~-~~l~~~~~~~~~~v---~~~~sgteA~~~al~~~~~~~~~~g~~~~~~vl~~~~~yhg~~~~~~~~~~~~~~~~ 154 (430)
.+.|+ ++..++++++..+. +--.||+.||.++..++.. ++++|+.++-.--||..-.......+ .
T Consensus 101 iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~--------PGD~ilg~~l~~GGHltHg~~~~~~~---v 169 (490)
T 3ou5_A 101 IELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQ--------PHDRIMGLDLPDGGHLTHGYMSDVKR---I 169 (490)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC---------CCCEECBC---------------------
T ss_pred HHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcC--------CCCEEEecccCCCCcccccccCCCcc---c
Confidence 33444 45567887666532 2235999999999988876 77889887765444421110000000 0
Q ss_pred hhhccCCCeeEeCCC---CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHH
Q psy14484 155 IYTSLLNKTYIITTP---DSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREI 231 (430)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l 231 (430)
.+.. .....++++ ++... |.|++++...++ ++++||+-. +..--..+ +++++++
T Consensus 170 ~~sg--~~~~~~~Y~vd~~t~~I------------Dyd~~~~~A~~~--kPklIi~G~---SaY~r~id----~~~~reI 226 (490)
T 3ou5_A 170 SATS--IFFESMPYKLNPKTGLI------------DYNQLALTARLF--RPRLIIAGT---SAYARLID----YARMREV 226 (490)
T ss_dssp ------------CBCEETTTTEE------------CHHHHHHHHHHH--CCSEEEECC---SSCCSCCC----HHHHHHH
T ss_pred cccc--ccccccccccCCCCCcc------------cHHHHHHHHhhc--CCCeEEECC---ccCccccC----HHHHHHH
Confidence 0000 001122221 11111 888998888865 566777744 22222233 8999999
Q ss_pred HHhcCCEEEEecccc-CCCCcccccccccCCCCCceeeee--cccCCCccccEEEEEcHH---------------HHHhh
Q psy14484 232 CNNYNIHLIADEIAV-GCGRTGKFFACEHAEIWPDFLCLS--KGITGGYLPLSLVMTTDK---------------IYNSI 293 (430)
Q Consensus 232 ~~~~gi~li~DEv~~-g~g~~g~~~~~~~~~~~~d~~~~s--K~l~gG~~~ig~~~~~~~---------------~~~~~ 293 (430)
|++.|++|++|-+|. |+--.| .+... .. ..|++|.+ |.|.| -+-|.++++++ +.+.+
T Consensus 227 Ad~vGA~Lm~DmAHiaGLVA~g-~~psP-~~-~ADvVTtTTHKTLrG--PrGG~Il~~~~~~~~~~k~~~~~~~~~~kki 301 (490)
T 3ou5_A 227 CDEVKAHLLADMAHISGLVAAK-VIPSP-FK-HADIVTTTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRI 301 (490)
T ss_dssp HHHHTCEEEEECGGGHHHHHTT-SSCCG-GG-TCSEEEEESSSTTCS--CSCEEEEEECSEEEECC--CCEEECCCHHHH
T ss_pred HhhcccEEEechhhhhhhhccc-ccCCc-cc-cceEEeccccccccC--CCceEEEeccccccccccccchhHHHHHHHH
Confidence 999999999998876 441111 11111 11 26888877 88877 47788888763 33333
Q ss_pred hccCCcccccccCCCCCC-HHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHchhcCCCeeeEeecceEEEEEEe
Q psy14484 294 YYKNNINIFLHSHSYSGN-PLACCAALATLEIFNK---DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVI 369 (430)
Q Consensus 294 ~~~~~~~~~~~~~t~~~~-~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~g~~~~~~~~ 369 (430)
.. ....+..++. .-.+++-..++..... .++.+++.++++.|.+.|.+. +++.+..-. ...++.+++.
T Consensus 302 n~------aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgT-dnHlvLvDl~ 373 (490)
T 3ou5_A 302 NF------AVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGT-DNHLVLVDLR 373 (490)
T ss_dssp HH------HHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSC-SSSEEEEECG
T ss_pred Hh------hcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCC-CceEEEEecc
Confidence 32 1111222222 2222222222332222 345566777888888888664 333332211 2234555665
Q ss_pred ecCCccchhHHHHHHHHHHHCCcEEee----c------CCEEEEeCCCC----CCHHHHHHHHHHHHHHHH
Q psy14484 370 IEDPEQIETFSKKFFVAALKNELLLRP----I------GNTVYLMPPYI----LNKNEIQHMTSAIFQTFN 426 (430)
Q Consensus 370 ~~~~~~~~~~a~~~~~~l~~~Gv~~~~----~------~~~lR~~~~~~----~t~e~i~~~~~~l~~~l~ 426 (430)
+... . .....+.|.+.||.+.. . ...||+..+.. ..++|++++.+.|.+++.
T Consensus 374 -~~g~-t---G~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 374 -PKGL-D---GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp -GGTC-C---HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred -ccCC-C---HHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 3111 1 24566677788998763 1 25789875543 478888888888877764
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=51.67 E-value=12 Score=31.08 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=30.5
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+-..++|+||- +.+..|.... +.++.+++++||+.+|.
T Consensus 157 Gl~Pa~vicEi-~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICEL-VRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEB-BCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEE-eECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 34679999997 7566676766 88999999999998764
No 238
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=48.48 E-value=28 Score=27.46 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHH-HHHHhcCC-EEEEecccc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR-EICNNYNI-HLIADEIAV 246 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~-~l~~~~gi-~li~DEv~~ 246 (430)
+.+.|++.++++ ++..+++.- +.+..|+..+.....+... .++++.++ +..+||-++
T Consensus 43 ~~~~l~~li~~~--~~~~ivVGl-P~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 43 GLSRLSELIKDY--TIDKIVLGF-PKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp CHHHHHHHHTTS--EEEEEEEEC-CCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHHc--CCCEEEEee-eecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 678999999864 667777764 4444454443332223333 44445676 567799776
No 239
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=44.73 E-value=45 Score=23.03 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=31.3
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEecc
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~DEv 244 (430)
....++++ .++..+|++-. -. +++....+..+|++++++++.-..
T Consensus 17 ~~v~kai~--~gkaklViiA~--------D~-~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 17 KQTVKALK--RGSVKEVVVAK--------DA-DPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp HHHHHHHT--TTCEEEEEEET--------TS-CHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHH--cCCeeEEEEeC--------CC-CHHHHHHHHHHHHHcCCCEEEECC
Confidence 45556676 35677777654 22 337789999999999998886543
No 240
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=44.55 E-value=21 Score=30.26 Aligned_cols=37 Identities=14% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+-..++|+||- ++ ..|.... +.++.+++++||+.+|.
T Consensus 176 Gl~Pa~VicEi-~~-ddG~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 176 NLVPITTICEM-MG-DDGNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp TSCSEEEEEEE-BC-TTSSBCC----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEE-eC-CCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 34689999997 64 4466666 88999999999998774
No 241
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=44.35 E-value=22 Score=29.61 Aligned_cols=37 Identities=24% Similarity=0.212 Sum_probs=29.6
Q ss_pred CCeEEEEEcccc-ccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 200 NKIAAIIIEPLV-QCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 200 ~~~~~vi~ep~v-~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
-..++++||- + .+..|...- +.++.+++++||+.+|.
T Consensus 157 l~Pa~vicEi-v~~~~dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 157 LQPAGAICEI-VSQKDEGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp SCSBEEEEEB-BCSSSTTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEE-eeeCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 4578899986 4 666776666 88999999999998774
No 242
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=38.87 E-value=44 Score=25.17 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
....++++. ++..+|++-. -.++.+....+..+|++++++++.-
T Consensus 26 ~~v~kai~~--gkakLViiA~--------D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 26 KEVVKALRK--GEKGLVVIAG--------DIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHH--SCCCEEEECT--------TCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHc--CCceEEEEeC--------CCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 445556664 4666777655 3344456888999999999987643
No 243
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=37.80 E-value=1.3e+02 Score=25.92 Aligned_cols=20 Identities=20% Similarity=0.067 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhc--CCEEEEe
Q psy14484 223 IYLKLVREICNNY--NIHLIAD 242 (430)
Q Consensus 223 ~~l~~l~~l~~~~--gi~li~D 242 (430)
+.++++++++.++ ++.+-+|
T Consensus 180 ~KI~~lr~~~~~~~~~~~I~VD 201 (246)
T 3inp_A 180 DKAKEISKWISSTDRDILLEID 201 (246)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEE
T ss_pred HHHHHHHHHHHhcCCCeeEEEE
Confidence 4456666666554 4777788
No 244
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=37.57 E-value=93 Score=23.86 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+...++++. ++..+|++-. -..+.+..+.+..+|++++++++.
T Consensus 47 ~~v~kal~~--gkaklViiA~--------D~~~~~~~~~l~~lc~~~~IP~~~ 89 (135)
T 2aif_A 47 NEATKALNR--GIAEIVLLAA--------DAEPLEILLHLPLVCEDKNTPYVF 89 (135)
T ss_dssp HHHHHHHHT--TCEEEEEEET--------TCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc--CCCeEEEEec--------CCChHHHHhHHHHHHHhcCCcEEE
Confidence 455666763 5677777654 334445568999999999998763
No 245
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=34.59 E-value=68 Score=23.58 Aligned_cols=41 Identities=10% Similarity=-0.019 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLI 240 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li 240 (430)
+...++++. ++..+|++-. -. +++....|..+|++++++++
T Consensus 27 ~~v~kai~~--gka~lViiA~--------D~-~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 27 KRTIKFVKH--GEGKLVVLAG--------NI-PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHT--TCCSEEEECT--------TC-BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHc--CCceEEEEeC--------CC-CHHHHHHHHHHHHHcCCCEE
Confidence 455666763 4566666654 22 56778999999999999855
No 246
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=34.00 E-value=39 Score=28.43 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=28.3
Q ss_pred CCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 200 ~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
-..++|+||- + +..|.... +.++.+++++||+.+|.
T Consensus 166 l~Pa~vicEi-~-~~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCEL-T-NDDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEB-B-CTTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEE-e-CCCCCccC----HHHHHHHHHHcCCCEEE
Confidence 3678899996 6 45566666 88999999999998764
No 247
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=31.82 E-value=61 Score=24.92 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
....+++++ ++..+|++-. -.++.+....+..+|++++++++.-
T Consensus 38 ~~v~kai~~--gkakLViiA~--------D~~p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 38 NEATKTLNR--GISEFIIMAA--------DCEPIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHH--TCEEEEEEET--------TCSSGGGGTHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHh--CCCeEEEEeC--------CCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 344455553 5667777654 3344456788899999999986643
No 248
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=31.64 E-value=67 Score=21.89 Aligned_cols=44 Identities=2% Similarity=-0.118 Sum_probs=34.1
Q ss_pred HHHHHHHHHHCCcE--EeecCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELL--LRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 380 a~~~~~~l~~~Gv~--~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
|+.+...|...|+- +.+.+..-|+.+....+.++.+.+.+.|++
T Consensus 23 A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 23 AETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 67888889888853 334456668888888888999999998876
No 249
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=29.84 E-value=1e+02 Score=20.69 Aligned_cols=44 Identities=5% Similarity=-0.078 Sum_probs=34.4
Q ss_pred HHHHHHHHHHCCcE--EeecCCEEEEeCCCCCCHHHHHHHHHHHHH
Q psy14484 380 SKKFFVAALKNELL--LRPIGNTVYLMPPYILNKNEIQHMTSAIFQ 423 (430)
Q Consensus 380 a~~~~~~l~~~Gv~--~~~~~~~lR~~~~~~~t~e~i~~~~~~l~~ 423 (430)
|..+...|...|+- +.+.+..-|+.+....+.++.+.+++.|++
T Consensus 23 A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 23 ADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 67888888887753 334566778887888899999999999876
No 250
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.86 E-value=1.6e+02 Score=21.05 Aligned_cols=56 Identities=7% Similarity=-0.068 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHH-HHHHhcCC-EEEEecccc
Q psy14484 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVR-EICNNYNI-HLIADEIAV 246 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~-~l~~~~gi-~li~DEv~~ 246 (430)
+++.|++.++++. -...|+--| .+.+ |...+.....++.. ++.++ ++ +..+||-+|
T Consensus 39 ~~~~l~~li~e~~-v~~iVvGlP-~~md-Gt~~~~~~~~~~f~~~L~~~-~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREG-LGKLVVGLP-LRTD-LKESAQAGKVLPLVEALRAR-GVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHT-CCEEEEECC-CCCC-SSSCCCSSTTHHHHHHHHHT-TCEEEEECCSCC
T ss_pred HHHHHHHHHHHcC-CCEEEEeec-cCCC-CCcCHHHHHHHHHHHHHhcC-CCCEEEECCCCC
Confidence 7889999998752 234455556 5444 33444332222222 22223 65 567888654
No 251
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=26.55 E-value=42 Score=31.90 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=24.0
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g 247 (430)
+++.++++.+-|+++||-+|+|=|...
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 567899999999999999999988653
No 252
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=26.35 E-value=1.5e+02 Score=26.42 Aligned_cols=22 Identities=23% Similarity=0.090 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhcCCEEEEecc
Q psy14484 223 IYLKLVREICNNYNIHLIADEI 244 (430)
Q Consensus 223 ~~l~~l~~l~~~~gi~li~DEv 244 (430)
+.++++.+.|+++|+.+|+|=-
T Consensus 105 ~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 105 NKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEec
Confidence 5678899999999999999843
No 253
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=26.18 E-value=94 Score=22.29 Aligned_cols=42 Identities=10% Similarity=-0.121 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+...++++. ++..+|++-. - .+++....|..+|++++++++.
T Consensus 22 ~~v~kai~~--gka~lViiA~--------D-~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 22 RKSIQYAKM--GGAKLIIVAR--------N-ARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHH--TCCSEEEEET--------T-SCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHc--CCCcEEEEeC--------C-CCHHHHHHHHHHHHhcCCCEEE
Confidence 455566664 4556666544 2 3567789999999999998653
No 254
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.97 E-value=99 Score=22.08 Aligned_cols=42 Identities=12% Similarity=-0.056 Sum_probs=29.2
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+...+++++ ++..+|++-. - .+++..+.+..+|++++++++.
T Consensus 21 ~~v~kai~~--gka~lViiA~--------D-~~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 21 NETIRLAKT--GGAKLIIVAK--------N-APKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHH--TCCSEEEEEC--------C-CCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc--CCccEEEEeC--------C-CCHHHHHHHHHHHHHcCCCEEE
Confidence 455566764 4566666544 2 3467789999999999998643
No 255
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=25.47 E-value=57 Score=30.76 Aligned_cols=30 Identities=17% Similarity=0.084 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+.+.++++.+.|+++|+-+|+|=|....+.
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 97 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTGF 97 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcccC
Confidence 467799999999999999999988664443
No 256
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=24.85 E-value=42 Score=23.40 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCCEEEEeccc
Q psy14484 225 LKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~DEv~ 245 (430)
-++|.+++++||++++-|..-
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 679999999999999999753
No 257
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=24.55 E-value=91 Score=23.61 Aligned_cols=43 Identities=14% Similarity=0.320 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
....+++++ ++..+|++-. -..|++....|..+|++++|+++.
T Consensus 30 ~~v~Kai~~--gka~LViiA~--------D~~p~~~~~~i~~lc~~~~Ip~~~ 72 (126)
T 2xzm_U 30 HEVLRTIEA--KQALFVCVAE--------DCDQGNYVKLVKALCAKNEIKYVS 72 (126)
T ss_dssp HHHHHHHHH--TCCSEEEEES--------SCCSTTHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc--CCceEEEEeC--------CCChHHHHHHHHHHHHHhCCCEEE
Confidence 344455653 4555666543 222346678999999999998874
No 258
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=23.97 E-value=1.5e+02 Score=22.98 Aligned_cols=23 Identities=17% Similarity=0.600 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHhcCCEEE-Eecc
Q psy14484 222 SIYLKLVREICNNYNIHLI-ADEI 244 (430)
Q Consensus 222 ~~~l~~l~~l~~~~gi~li-~DEv 244 (430)
+.+.+-|..+|.+|+|.|| ||+.
T Consensus 62 ~~y~kLveAlC~E~~I~lIkVdd~ 85 (146)
T 3cg6_A 62 QIHFTLIQAFCCENDIDIVRVGDV 85 (146)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCH
T ss_pred HHHHHHHHHHHhhcCCCeEEeCch
Confidence 4678899999999999775 5554
No 259
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=23.73 E-value=73 Score=27.03 Aligned_cols=38 Identities=11% Similarity=0.102 Sum_probs=29.2
Q ss_pred CCCeEEEEEccccccC----------CCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 199 HNKIAAIIIEPLVQCA----------GGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 199 ~~~~~~vi~ep~v~~~----------~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+-..++|+||- ++-. .|...- +.++.+++++||+.+|.
T Consensus 165 Gl~PagVicEi-~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 165 GKRPVAVISEI-VDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp TCCSBEEEEEB-EECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEe-CCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 34678999997 6541 466666 88999999999998775
No 260
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=22.50 E-value=59 Score=27.93 Aligned_cols=52 Identities=10% Similarity=0.064 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEE-ccccccC---CCcccCChHH---HHHHHHHHHhcCCEEEEec
Q psy14484 187 AIFDLEILLKKNHNKIAAIII-EPLVQCA---GGMIMYDSIY---LKLVREICNNYNIHLIADE 243 (430)
Q Consensus 187 d~~~le~~l~~~~~~~~~vi~-ep~v~~~---~G~~~~~~~~---l~~l~~l~~~~gi~li~DE 243 (430)
-++.++++++ .-+..|.+ ++ -.+. .| ...+.++ .+++.++|+++++.||+++
T Consensus 45 ~~~~~~~al~---~Gv~~vqlR~K-~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 45 LAQFAEAALA---GGVDIIQLRDK-GSPGELRFG-PLQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHH---TTCSEEEECCT-TCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHH---CCCCEEEEccC-CCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 4577788886 23555655 43 1000 00 0122333 3689999999999888854
No 261
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=21.88 E-value=77 Score=30.31 Aligned_cols=29 Identities=14% Similarity=0.013 Sum_probs=24.6
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+.+.++++.+.|+++|+-+|+|=|....+
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 56779999999999999999998866443
No 262
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=21.71 E-value=78 Score=30.11 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=24.7
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+.+.++++.+-|+++|+-+|+|=|....+
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 56789999999999999999998866443
No 263
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=21.40 E-value=79 Score=30.08 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=25.7
Q ss_pred CChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 220 YDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 220 ~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
.+.+.++++.+.|+++|+-+|+|=|....+.
T Consensus 95 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 95 GTADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 3567899999999999999999988765443
No 264
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.99 E-value=64 Score=30.48 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=24.0
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
+.+.++++.+-|+++|+-+|+|=|....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 90 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHM 90 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccc
Confidence 4577999999999999999999886633
No 265
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.95 E-value=86 Score=30.88 Aligned_cols=49 Identities=14% Similarity=0.204 Sum_probs=34.8
Q ss_pred CeEEEEEccccccCCC-------------cccCChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 201 KIAAIIIEPLVQCAGG-------------MIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 201 ~~~~vi~ep~v~~~~G-------------~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
-+.+|.+.| +.-... ....+.+.++++.+-|+++|+-+|+|=|+..++.
T Consensus 186 Gvt~I~L~P-i~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~ 247 (585)
T 1wzl_A 186 GVTALYFTP-IFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGD 247 (585)
T ss_dssp TCCEEEECC-CEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred CCCEEEECC-cccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCC
Confidence 366788888 543221 0123567899999999999999999988765543
No 266
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=20.85 E-value=3.7e+02 Score=24.33 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=23.0
Q ss_pred eEEEEE--ccccccCCCcccCChHHHHHHHHHHHhcCCEEEEe
Q psy14484 202 IAAIII--EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242 (430)
Q Consensus 202 ~~~vi~--ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~D 242 (430)
+-.|++ +. +..+|+...--.. -.+.-+|+.|++++++=
T Consensus 228 Vd~VivGAd~-V~aNG~v~NKiGT--~~lAl~Ak~~~vPfyV~ 267 (347)
T 1t9k_A 228 IDAVVVGADR-IALNGDTANKIGT--YSLAVLAKRNNIPFYVA 267 (347)
T ss_dssp CSEEEECCSE-EETTSCEEEETTH--HHHHHHHHHTTCCEEEE
T ss_pred CCEEEECccE-EecCCCEEecccH--HHHHHHHHHcCCCEEEe
Confidence 444443 55 6666654433222 35667899999988875
No 267
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=20.81 E-value=2.6e+02 Score=26.82 Aligned_cols=23 Identities=9% Similarity=0.271 Sum_probs=19.0
Q ss_pred HHHHHHHHHhcCCEEEEeccccC
Q psy14484 225 LKLVREICNNYNIHLIADEIAVG 247 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~DEv~~g 247 (430)
..++.++++++|++++=|+..+|
T Consensus 302 ~P~~~elae~~gvpI~GDD~KSG 324 (533)
T 1p1j_A 302 VPGLVQLAEHEGTFIAGDDLKSG 324 (533)
T ss_dssp CHHHHHHHHHHTCCEEESSBCCS
T ss_pred CHHHHHHHHHhCCceeccccccC
Confidence 44678999999999999987663
No 268
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=20.78 E-value=4.5e+02 Score=23.44 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=20.0
Q ss_pred CCCeEEEcCCchHHHHHHHHHHHHh
Q psy14484 93 KLGHCFYGSDGASAVEVALKMSFHY 117 (430)
Q Consensus 93 ~~~~v~~~~sgteA~~~al~~~~~~ 117 (430)
+.+.++.+.+.-+....++.++..+
T Consensus 65 GV~~ii~~g~~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 65 GLSHIIITSGCLNDFKKAIEIINKY 89 (325)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CCcEEEEccCCHHHHHHHHHHHHHC
Confidence 6678888888788888888888775
No 269
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=20.71 E-value=77 Score=29.82 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+.+.++++.+-|+++|+-+|+|=|....+
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 46789999999999999999998876544
No 270
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=20.69 E-value=1e+02 Score=30.52 Aligned_cols=63 Identities=13% Similarity=-0.001 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhC-CCCeEEEEEccccccCC-------C----------cccCChHHHHHHHHHHHhcCCEEEEeccccCC
Q psy14484 187 AIFDLEILLKKN-HNKIAAIIIEPLVQCAG-------G----------MIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248 (430)
Q Consensus 187 d~~~le~~l~~~-~~~~~~vi~ep~v~~~~-------G----------~~~~~~~~l~~l~~l~~~~gi~li~DEv~~g~ 248 (430)
|+..+.+.|... .--+.+|.+.| +.-.. | ...-+.+.++++.+-|+++|+-+|+|=|....
T Consensus 146 dl~gi~~~Ldyl~~LGv~aI~l~P-i~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~ 224 (601)
T 3edf_A 146 DIRGTIDHLDYIAGLGFTQLWPTP-LVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHI 224 (601)
T ss_dssp CHHHHHHTHHHHHHTTCCEEEESC-CEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc-cccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCccc
Confidence 444444444322 12367788888 55321 1 01235577999999999999999999987644
Q ss_pred CC
Q psy14484 249 GR 250 (430)
Q Consensus 249 g~ 250 (430)
+.
T Consensus 225 ~~ 226 (601)
T 3edf_A 225 GK 226 (601)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 271
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=20.65 E-value=77 Score=29.43 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=24.9
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+.+.++++.+.|+++|+-+|+|=|....+.
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 457799999999999999999988765443
No 272
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=20.63 E-value=73 Score=29.81 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=22.3
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCG 249 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g 249 (430)
+.+.++++.+.|+++|+-+|+|=|....+
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 45668888888888888888888765443
No 273
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=20.09 E-value=95 Score=23.33 Aligned_cols=43 Identities=7% Similarity=0.111 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCCeEEEEEccccccCCCcccCChHHHHHHHHHHHhcCCEEEE
Q psy14484 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241 (430)
Q Consensus 189 ~~le~~l~~~~~~~~~vi~ep~v~~~~G~~~~~~~~l~~l~~l~~~~gi~li~ 241 (430)
+...++++. ++..+|++-. -..+.+....|..+|++++++++.
T Consensus 34 ~~v~kal~~--gka~lViiA~--------D~~~~~~~~~l~~lc~~~~Vp~~~ 76 (124)
T 2fc3_A 34 NETTKAVER--GLAKLVVIAE--------DVDPPEIVMHLPLLCDEKKIPYVY 76 (124)
T ss_dssp HHHHHHHHT--TCCSEEEEET--------TCSSGGGTTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc--CCceEEEEcC--------CCChHHHHHHHHHHHHHcCCCEEE
Confidence 445556653 4555565544 122223467788889999987653
No 274
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.05 E-value=56 Score=23.55 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=18.6
Q ss_pred HHHHHHHHHhcCCEEEEeccc
Q psy14484 225 LKLVREICNNYNIHLIADEIA 245 (430)
Q Consensus 225 l~~l~~l~~~~gi~li~DEv~ 245 (430)
-++|.+++++||++++-|..-
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 679999999999999999753
No 275
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=20.01 E-value=82 Score=31.04 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=25.7
Q ss_pred ChHHHHHHHHHHHhcCCEEEEeccccCCCC
Q psy14484 221 DSIYLKLVREICNNYNIHLIADEIAVGCGR 250 (430)
Q Consensus 221 ~~~~l~~l~~l~~~~gi~li~DEv~~g~g~ 250 (430)
+.+.++++.+.|+++|+-+|+|=|+..++.
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 250 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCGY 250 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCcc
Confidence 467899999999999999999998775543
Done!