RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14484
(430 letters)
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 627 bits (1618), Expect = 0.0
Identities = 222/405 (54%), Positives = 297/405 (73%), Gaps = 2/405 (0%)
Query: 26 WSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85
W L D G+RYLDAISSWWVNLFGH+N IN ALK+QL+ LEH ML+ TH+P I+L+E+
Sbjct: 47 W-LYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAER 105
Query: 86 LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 145
L++LT LGH F+ SDGASAVE+ALKMSFH W N+G +K++F+CL N YHGET+GAL
Sbjct: 106 LAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALG 165
Query: 146 VTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205
VT++ FK+ Y L+ +++ +PD+R G +A ++A A+ D+ L + KIAA+
Sbjct: 166 VTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAAL 225
Query: 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265
I+EPLVQCA GM M+D YL+ +R +C+ Y +HLIADEIAVGCGRTG FFACE A +WPD
Sbjct: 226 IVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPD 285
Query: 266 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325
FLCLSKGI+GGYLPLSLV++ D I+ + Y + FLHSHSY+GNPLAC AALATL++F
Sbjct: 286 FLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLF 345
Query: 326 NKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFV 385
+D++L R ++ ++ AL L HP++ + RQ+G I+AFDV + D + TFS++FF
Sbjct: 346 AEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVAL-DGDAARTFSRRFFE 404
Query: 386 AALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVIT 430
AAL+ ELLLRPIG TVYLMPPY+L+ +EI + T + +
Sbjct: 405 AALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDATLA 449
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 558 bits (1440), Expect = 0.0
Identities = 175/418 (41%), Positives = 259/418 (61%), Gaps = 9/418 (2%)
Query: 9 KKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEH 68
K + L I + + L D G+ Y+D ISSWWVN+ GH++ IN A+K QL+KLEH
Sbjct: 9 KDALPPLPIERAEGVY---LYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLDKLEH 65
Query: 69 VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK 128
VM LTH+P I+L+E+L +T L F+ G+ AVEVALKM+ YW N+G K +
Sbjct: 66 VMFGGLTHEPAIELAERLVEITPEGLEKVFFSDSGSVAVEVALKMALQYWQNQGRPGKTR 125
Query: 129 FICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188
F+ +N YHG+T GA++V ++ F ++ LL + I P ++ +
Sbjct: 126 FLAFRNGYHGDTFGAMSVGDVGGFHALFEPLLFEVVFIPAPPCYR---CWDPDDCEAECL 182
Query: 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
LE LL+++ ++IAA I+EPLVQ AGGM Y YL+ +RE+C+ Y + LIADEIA G
Sbjct: 183 AALEALLEEHADEIAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVLLIADEIATGF 242
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308
GRTGK FACEHA + PD LCLSKG+TGGYLPL+ +TTD+IY + Y + F+H H+Y
Sbjct: 243 GRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAFYSDDEGKAFMHGHTY 302
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDV 368
+GNPLAC AALA+L++ +++ L+++++ ++ L L HP + + R G I A ++
Sbjct: 303 TGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPLRDHPGVADVRVLGAIGAVEL 362
Query: 369 IIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426
+ + K L+ +LLRP+GN +YLMPPYI+ E++ +T+AI + +
Sbjct: 363 VRDVEPY---IGAKIQQFFLERGVLLRPLGNVIYLMPPYIITDEELEKLTAAIKEAID 417
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 512 bits (1321), Expect = 0.0
Identities = 200/409 (48%), Positives = 274/409 (66%), Gaps = 13/409 (3%)
Query: 17 IRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH 76
IR + W L D GKRYLDA+SSWWVN+FGH+N IN+ +K+Q+++LEHV+L+ +H
Sbjct: 33 IRRGEGVW---LEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSH 89
Query: 77 KPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSY 136
+PVI+LSE+L +T L CFY +G+SA+EVALKMSFHYW N+G KK+F+ L NSY
Sbjct: 90 EPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSY 149
Query: 137 HGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 196
HGETL A++V ++ F E Y LL T + +PD +G S E +R +E L
Sbjct: 150 HGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLA 209
Query: 197 KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256
++H++IAA+I+EPL+Q AGGM MY +YLKL+RE C+ Y +HLI DEIAVG GRTG FA
Sbjct: 210 EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA 269
Query: 257 CEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIY--YKNNINIFLHSHSYSGNPLA 314
CE A I PDFLCLSK +TGGYLPL+ V+TTD +Y + Y Y + FLHSHSY+GNPLA
Sbjct: 270 CEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDY-PTLRAFLHSHSYTGNPLA 328
Query: 315 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE 374
C AALATL+IF +DN+++ +++ +A L HP + RQ GMI A + +++D
Sbjct: 329 CAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIE-MVQDKA 387
Query: 375 QIETF------SKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHM 417
+ K + AL+ LLRP+G+ VY +PPY++ +I +
Sbjct: 388 SKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITPEQIDFL 436
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 504 bits (1301), Expect = e-178
Identities = 160/414 (38%), Positives = 246/414 (59%), Gaps = 16/414 (3%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
+ I + ++ L G+ +DAISSWWV GH++ YI++A++ QL++L+HV+ +
Sbjct: 26 IPIVRAEGAY---LYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGF 82
Query: 75 THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQN 134
TH+P +L+++L +LT L H F+ G+ AVEVALKM+ YW N+G + +F+ L+
Sbjct: 83 THEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRG 142
Query: 135 SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194
YHG+T+G ++V + +YT LL + P + + + LE L
Sbjct: 143 GYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFP----------PDGYEQATLDALEAL 192
Query: 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF 254
L+K+ +IAA I+EPLVQ AGGM+ YD YL +R IC+ + + LI DEIA G GRTG
Sbjct: 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTL 252
Query: 255 FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLA 314
FACE A + PD +CLSKG+TGGYLPL+ + T +I+ + Y + F+HS SY+ NPLA
Sbjct: 253 FACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLA 312
Query: 315 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPE 374
C AA A+L++F + +L+R++ + + L P + + R G I A ++ E
Sbjct: 313 CAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLE 372
Query: 375 QIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
+ AL+ +LLRP+GNT+YLMPPYI+ E+ +T AI + +E+
Sbjct: 373 RD---GPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADEL 423
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 478 bits (1233), Expect = e-168
Identities = 175/411 (42%), Positives = 248/411 (60%), Gaps = 12/411 (2%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L D+ G+RYLD +S W GH I +A+K QL+KL HVM TH+P I+L+EKL+
Sbjct: 38 LTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLA 97
Query: 88 SLT-QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
L + L H F+ G+ AVE ALKM+ YW +G +KKFI +N YHG+TLGA++V
Sbjct: 98 ELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSV 157
Query: 147 TNIQ-SFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNH-NKIA 203
Y LL + + P + R G E A A +LE L+ ++ IA
Sbjct: 158 GGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD-ELEALILEHGPETIA 216
Query: 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 263
A I+EP+V AGGM++ YLK VREIC+ Y I LIADE+A G GRTGK FACEHA I
Sbjct: 217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIV 276
Query: 264 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323
PD LCL+KG+TGGYLPLS V+T+D+IY + + F+H H+YSGNPLAC AALA L+
Sbjct: 277 PDILCLAKGLTGGYLPLSAVLTSDRIYEAF-SDGDAGAFMHGHTYSGNPLACAAALANLD 335
Query: 324 IFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFDVIIEDPEQIETFSK- 381
I ++++L+R+++ + L + + HP + + R G+I A + ++ D F
Sbjct: 336 ILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIE-LVADKATKTPFEAR 394
Query: 382 ---KFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429
+ AAL+ LL+RP+G+ +YLMPP I+ + EI + A+ + +E +
Sbjct: 395 VGARVRAAALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDETL 445
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 406 bits (1045), Expect = e-139
Identities = 172/415 (41%), Positives = 258/415 (62%), Gaps = 13/415 (3%)
Query: 26 WSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEK 85
W L+ G+RYLDA+SSWW NLFGH+ I A+ Q +LE VML+ TH+P ++L+E+
Sbjct: 57 W-LVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQ 115
Query: 86 LSSLTQYK-----LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET 140
L ++ + L FY +G++ VEVALKM+FHY++N+G + +FI L+N YHGET
Sbjct: 116 LLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGET 175
Query: 141 LGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN 200
+GALAV +I ++ +Y LL ++ +PD+ G SA + A A L+ L +++
Sbjct: 176 IGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPG 235
Query: 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 260
+I A+I+EP +QCAGGM M+ YL+ RE+C+ + LIADEIA G GRTG FACE A
Sbjct: 236 EICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQA 295
Query: 261 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320
+ PD LCLSKG+TGG+LPLS V+ T ++Y++ + FLHSHSY+GNPLAC AALA
Sbjct: 296 GVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALA 355
Query: 321 TLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFS 380
TL+IF D+++ R ++T+ + HP + + RQ GM+ AF+ + + F
Sbjct: 356 TLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFE-LTRGGNKRTPFP 414
Query: 381 K------KFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429
+ AAL ++LRP+G+ +Y MPPY +++ ++ + +E +
Sbjct: 415 PAARVGLHAYRAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 383 bits (986), Expect = e-131
Identities = 141/416 (33%), Positives = 224/416 (53%), Gaps = 27/416 (6%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
LVI + ++ L DV G RYLD +S V GH++ + +ALK QL KL H L
Sbjct: 20 LVIVRAEGAY---LYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFF 76
Query: 75 THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQN 134
++P ++L+E L +LT L F+ + G AVE ALK++ Y +KK I +
Sbjct: 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYT------GRKKIISFEG 130
Query: 135 SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194
+YHG TLGAL++T + ++ + LL + P R A+++ LE
Sbjct: 131 AYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPY-RYRPPAELADDLE-----ALEEA 184
Query: 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF 254
L+++ ++AA+I+EP +Q GG+I+ YLK +RE+C + I LIADE+ G GRTGK
Sbjct: 185 LEEHPEEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM 243
Query: 255 FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLA 314
FA EH + PD + L KG+ GG LPL V+ ++I ++ LH ++ GNPLA
Sbjct: 244 FAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPAGP----GLHGGTFGGNPLA 298
Query: 315 CCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDP 373
C AALA LE+ ++ +L+ ++ + + + L L ++ + R +G++ + +++D
Sbjct: 299 CAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIE-LVKDR 357
Query: 374 EQIETFSK---KFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTF 425
+ K AAL+ LLLRP G N + L+PP I+ + EI A+ +
Sbjct: 358 ATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 365 bits (940), Expect = e-123
Identities = 165/411 (40%), Positives = 250/411 (60%), Gaps = 10/411 (2%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L DV+G Y D +SS W+N+ GH +++A++ QLNK+ H L L + P I L+EKL
Sbjct: 50 LYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLI 109
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
+ L FY GA+AVE+A+KM+F YW NKG K++F+ L+N+YHG+T+GA++V
Sbjct: 110 EVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVG 169
Query: 148 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207
I F ++Y+SLL + + P + GN EI + + +LE LLK+ H +IAAII+
Sbjct: 170 AIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIV 229
Query: 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267
EPLVQ AGGMI YLK +R +C YN+ I DE+A G GRTGK FACEH + PD +
Sbjct: 230 EPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM 289
Query: 268 CLSKGITGGYLPLSLVMTTDKIYNSIY--YKNNINIFLHSHSYSGNPLACCAALATLEIF 325
KG+TGGYLP+++ +TTD+IYN+ Y Y F H HSY+GNPL C ALA LE++
Sbjct: 290 TAGKGLTGGYLPIAITVTTDEIYNAFYGDY-EEQKTFFHGHSYTGNPLGCAVALANLELY 348
Query: 326 NKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETF--SKKF 383
K N+++++++ + + L L + + RQ G++ + ++++ E E F +++
Sbjct: 349 EKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIE-LVKNKETKEPFEWTERV 407
Query: 384 FVAALKNE----LLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVIT 430
V K +L RP+GNT+ MPP +E+ M +++ ++V
Sbjct: 408 GVQVCKRSRELGMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 324 bits (832), Expect = e-109
Identities = 129/347 (37%), Positives = 187/347 (53%), Gaps = 17/347 (4%)
Query: 21 KNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI 80
K W L DV G+RYLD +S V GH + I +A+K Q +KL H T +P +
Sbjct: 6 KGVW---LYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTEPAL 62
Query: 81 KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGET 140
+L+EKL+ LT L F+ + G+ A E A+K++ Y KG K K I +HG T
Sbjct: 63 QLAEKLAQLTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRT 122
Query: 141 LGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHN 200
LGAL+VT +K+ + L Y + PD +A E CA L ++ + +
Sbjct: 123 LGALSVTGSSGYKKGFGPSLPGVYFLPYPDLE------AAEEELACADEALRLIKAVHDD 176
Query: 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 260
IAA+I+EP +Q GG++ +L +REIC + + LIADE+ G GRTGK FACEH
Sbjct: 177 NIAAVIVEP-IQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHY 235
Query: 261 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALA 320
+ PD + L+K +TGG PLS V+ T +I + + H ++ GNPLAC AALA
Sbjct: 236 GVTPDIMTLAKALTGGL-PLSAVLATAEIMQAFH------PGSHGGTFGGNPLACAAALA 288
Query: 321 TLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFD 367
L+I +N+LQ + + K L +L P I + R KG++ A +
Sbjct: 289 VLDIIEDENLLQNAQEKGDYLRKGLLALQDKPVIGDVRGKGLMIAIE 335
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 316 bits (811), Expect = e-104
Identities = 143/391 (36%), Positives = 223/391 (57%), Gaps = 15/391 (3%)
Query: 32 SGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQ 91
G+R +D +SSWW + G+++ +N A+K+Q++ + HVM +TH P I+L KL ++T
Sbjct: 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTP 100
Query: 92 YKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQ- 150
L F G+ AVEVA+KM+ YW KG +++F+ L++ YHG+T GA++V +
Sbjct: 101 QPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDN 159
Query: 151 SFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPL 210
S +Y L + P SR + + + I L+ + ++IAA+I+EP+
Sbjct: 160 SMHSLYKGYLPENLFAPAPQSRFDGEWDERD------IAPFARLMAAHRHEIAAVILEPI 213
Query: 211 VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLS 270
VQ AGGM +Y +LK VR++C+ I LIADEIA G GRTGK FACEHA I PD LCL
Sbjct: 214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLG 273
Query: 271 KGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNI 330
K +TGG + LS +TT ++ +I F+H ++ GNPLAC A A+L + +
Sbjct: 274 KALTGGTMTLSATLTTREVAETI-SNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDW 332
Query: 331 LQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKN 390
Q+++ ++ + L L P + + R G I V P + ++FFV +
Sbjct: 333 QQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGV--VETTRPVNMAAL-QRFFV---EQ 386
Query: 391 ELLLRPIGNTVYLMPPYILNKNEIQHMTSAI 421
+ +RP G +YLMPPYI+ ++Q +T+A+
Sbjct: 387 GVWIRPFGKLIYLMPPYIILPEQLQRLTAAV 417
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 289 bits (741), Expect = 5e-94
Identities = 135/397 (34%), Positives = 220/397 (55%), Gaps = 14/397 (3%)
Query: 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92
G+R +D +SSWW L G+++ +N A NQL K+ H+M TH+P ++L++KL +
Sbjct: 43 GRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPP 102
Query: 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN-IQS 151
L F+ G+ AVEVA+KM+ Y KG + + KF +++ YHG+T A++V + +
Sbjct: 103 SLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162
Query: 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211
++ L Y + P +I G N+ AI L+ LL++ ++IAA+I+EP+V
Sbjct: 163 MHGLFNHSLPVQYFLPQP---SIKFGEEWND---EAIEPLQDLLEQKGDEIAALILEPVV 216
Query: 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSK 271
Q AGGM Y YL RE+C+ Y + LI DEIA G GRTGK FA EHA + PD +C+ K
Sbjct: 217 QGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGK 276
Query: 272 GITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331
+TGGYL LS +TT+ I +I F+H ++ NPLAC A ++ + +
Sbjct: 277 ALTGGYLTLSATITTEAIAQTI-CSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQ 335
Query: 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391
Q I + ++ + L + R G I + +++P + T +F +++
Sbjct: 336 QNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVE--MKEPVNMATLQPRF----VEHG 389
Query: 392 LLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
+ +RP G VY+MPP+I++ +E+ +TS + + +
Sbjct: 390 IWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 271 bits (695), Expect = 7e-87
Identities = 135/431 (31%), Positives = 218/431 (50%), Gaps = 39/431 (9%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
LVI + ++ L DV G YLD +S V GH++ + +A+K QL KL H +L
Sbjct: 40 LVIVRAEGAY---LYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDL 96
Query: 75 THKPVIKLSEKLSSLT-QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQ 133
++P ++L+EKL++L L F+G+ GA AVE A+K++ Y + I
Sbjct: 97 YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFD 150
Query: 134 NSYHGETLGALAVTNIQSF-KEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCA---- 187
++HG TLGAL++T + K + L Y + P+ R
Sbjct: 151 GAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210
Query: 188 --IFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIA 245
+FDLE+ ++AAIIIEP +Q GG+I+ +LK +R++C + I LIADE+
Sbjct: 211 RALFDLEV----GPEEVAAIIIEP-IQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ 265
Query: 246 VGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHS 305
G GRTGK FA EH + PD + L+K + GG LPLS V+ +I + H
Sbjct: 266 TGFGRTGKMFAFEHFGVEPDIVTLAKSL-GGGLPLSAVVGRAEI-------MDWPPGGHG 317
Query: 306 HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIW 364
++ GNP+AC AALA L++ ++N+L+R ++ + + L L HP I + R G++
Sbjct: 318 GTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMI 377
Query: 365 AFDVIIEDPEQIE---TFSKKFFVAALKNELLL---RPIGNTVYLMPPYILNKNEIQHMT 418
+ +++D + E + K A + LLL P GN + ++PP ++ E+
Sbjct: 378 GVE-LVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGL 436
Query: 419 SAIFQTFNEVI 429
+ + E +
Sbjct: 437 DILEEALKEAL 447
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 265 bits (678), Expect = 9e-85
Identities = 135/390 (34%), Positives = 212/390 (54%), Gaps = 15/390 (3%)
Query: 33 GKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSLTQY 92
G +DA+SSWW GH + + A Q++ + HVM LTH+P IKL+ KL +LT
Sbjct: 39 GSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDN 98
Query: 93 KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQS- 151
L H FY G+ +VEVA+KM+ Y +G + + + ++ YHG+T A++V + +
Sbjct: 99 GLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGG 158
Query: 152 FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLV 211
++ L + P R G+S EI+ + LE+L+ +AAIIIEP+V
Sbjct: 159 MHSLWKGTLPEQIFAPAPPVR----GSSPQEISE-YLRSLELLID---ETVAAIIIEPIV 210
Query: 212 QCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSK 271
Q AGGM +D ++ VR +C+ ++I LIADEIA G GRTG+ FA A + PD +C+ K
Sbjct: 211 QGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGK 270
Query: 272 GITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNIL 331
+TGG++ + + TDK+ I N +H ++ NPLAC A A+LEI
Sbjct: 271 ALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWR 330
Query: 332 QRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE 391
+++ + ++ L+ L P + + R G I V +E P +E ++ AA+ +
Sbjct: 331 KQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGV--VEMEQPVDMEEATQ----AAVDHG 384
Query: 392 LLLRPIGNTVYLMPPYILNKNEIQHMTSAI 421
+ LRP G VY+MPPYI +I + +A+
Sbjct: 385 VWLRPFGRLVYVMPPYITTSEQIAQICAAL 414
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 256 bits (656), Expect = 1e-81
Identities = 130/439 (29%), Positives = 211/439 (48%), Gaps = 53/439 (12%)
Query: 1 MNNIVYFKKKSSNN-----LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYI 55
I F K +VI + ++ W D G+ YLD + VN GH + +
Sbjct: 7 AATIELFMKYLMPTYGRLPVVIVRGEGAYVW---DQQGREYLDFAAGIAVNNLGHCHPAL 63
Query: 56 NKALKNQLNKLEHVMLSNL-THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMS 114
+ALK Q KL HV SNL ++P +L+EKL L+ F+ + GA A E ALK++
Sbjct: 64 VEALKEQAEKLWHV--SNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLA 120
Query: 115 FHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNI 174
Y + K K I +NS+HG TLGAL+ T +++ + LL P R++
Sbjct: 121 RKYTGDP---EKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLL--------PGFRHV 169
Query: 175 NKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNN 234
D+E L AA+I+EP +Q GG+I +LK +RE+C+
Sbjct: 170 PFN------------DIEALEAAIDEDTAAVIVEP-IQGEGGVIPAPPEFLKALRELCDE 216
Query: 235 YNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIY 294
+ LI DE+ G GRTGK FA EH + PD L L+K + GG+ P+ ++ T++I
Sbjct: 217 HGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEI----- 270
Query: 295 YKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPK 353
+ H ++ GNPLAC ALA LE+ ++ +L+ + + + + + L L +P
Sbjct: 271 -ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPL 329
Query: 354 IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNE--LLLRPIGNTVYLMPPYILNK 411
+ R +G++ + +++P + + V AL+ E L+L N + +PP ++ +
Sbjct: 330 VKEVRGRGLMIGIE--LKEPYRA-----RDIVRALREEGVLVLPAGPNVIRFLPPLVITE 382
Query: 412 NEIQHMTSAIFQTFNEVIT 430
EI A+ +
Sbjct: 383 EEIDEALDALERALAAASA 401
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 250 bits (641), Expect = 7e-79
Identities = 133/416 (31%), Positives = 219/416 (52%), Gaps = 20/416 (4%)
Query: 28 LIDVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLE-HVMLSNLTHKPVIKLSEK 85
+ D+ GK+ LD + W VN+ GH+ + +A+ QL++LE + TH I+LS +
Sbjct: 36 VYDIDGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYE 94
Query: 86 LSSLTQYK-LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL 144
L + + + F+ S G+ +VE ALK++ YW +G + KFI L+ YHG G
Sbjct: 95 LIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGA 154
Query: 145 AVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIAR-CA-IFDLEILLKKNHNK 201
+V F+ Y LL + + TP RN E+AR CA + + EI +
Sbjct: 155 SVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDT- 213
Query: 202 IAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAE 261
IAA I EP VQ AGG+I+ + + LVRE+C+ + I LIADE+ G GRTG +F
Sbjct: 214 IAAFIAEP-VQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWG 272
Query: 262 IWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYY-KNNINIFLHSHSYSGNPLACCAALA 320
+ PD +CL+KGIT GY+PL M +I ++ + +H ++YSG+P+AC AALA
Sbjct: 273 VKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALA 332
Query: 321 TLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFDVIIE-------D 372
TL+I ++++ ++ + + L L + + R KG++ A D++ + D
Sbjct: 333 TLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPID 392
Query: 373 PEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
P + ++ A +N +L+RP G + L PP ++ + ++ + A+ + V
Sbjct: 393 PSK--GYANAVADVARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 245 bits (627), Expect = 3e-77
Identities = 126/411 (30%), Positives = 208/411 (50%), Gaps = 47/411 (11%)
Query: 21 KNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH-KPV 79
+ + W D GK YLD ++ VN GH + + +A++ Q KL H SNL + +P
Sbjct: 29 EGARLW---DDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT--SNLYYIEPQ 83
Query: 80 IKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGE 139
+L+EKL L+ + F+ + GA A E A+K++ Y + KG K + I +NS+HG
Sbjct: 84 EELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGR 140
Query: 140 TLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH 199
TL L+ T ++E + L+ + N D+E L
Sbjct: 141 TLATLSATGQPKYQEGFEPLV--------EGFIYV----PFN--------DIEALKAAIT 180
Query: 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 259
+K AA+++EP +Q GG+ D YL+ +RE+C+ I LI DE+ G GRTGK FA +H
Sbjct: 181 DKTAAVMLEP-IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQH 239
Query: 260 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 319
I PD + L+KG+ GG +P+ V+ +K+ + + H ++ GNPLAC AAL
Sbjct: 240 YGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTPGD------HGSTFGGNPLACAAAL 292
Query: 320 ATLEIFNKDNILQRISQDMKKITKALTSLI-THPKIINFRQKGMIWAFDVIIEDPEQIET 378
A +EI ++ +L+ ++ + + L L+ +P I R G++ + IE ++
Sbjct: 293 AVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLM----IGIE----LDR 344
Query: 379 FSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
+ + AL+ LL+ G N + L+PP I++K EI + + E+
Sbjct: 345 PAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 233 bits (597), Expect = 2e-72
Identities = 126/420 (30%), Positives = 210/420 (50%), Gaps = 22/420 (5%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
LID +GKRYLDA V+ GHS+ + A+ Q+++L + S T +P L+++L
Sbjct: 24 LIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLV 83
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
+ L H ++ S G+ AVE ALK++ Y+ G ++ FI + SYHG TLGALA+
Sbjct: 84 AAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIG 143
Query: 148 NIQSFKEIYTSLLNKTYIITTP--DSRNINKGNSANEIARCAIFDLEI-LLKKNHNKIAA 204
+E + LL + + ++ P R G S + +LE +L+ + +AA
Sbjct: 144 GNAWRREPFAPLLIEAHHVS-PCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAA 202
Query: 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264
+ E +V G + Y K +RE+C+ Y + LI DE+ G GRTG FACE + P
Sbjct: 203 FVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAP 262
Query: 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324
D + ++KG+ GY P+ V+ +D+IY++I + F H H+Y G+ AC AALA +
Sbjct: 263 DLVTIAKGLGAGYQPIGAVLASDRIYDAI--ADGSGFFQHGHTYLGHATACAAALAVQRV 320
Query: 325 FNKDNILQRISQDMKKITKALTS-LITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKF 383
+D +L + +++ L L HP + + R +G+ + ++ D F
Sbjct: 321 IAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVE-LVADRATKAPFDPAL 379
Query: 384 FVAA-LKNE-----LLLRPIGNT--------VYLMPPYILNKNEIQHMTSAIFQTFNEVI 429
+ A +K E L++ P+G T V L PP+I+ +I + + + +
Sbjct: 380 KLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 231 bits (590), Expect = 5e-72
Identities = 131/410 (31%), Positives = 204/410 (49%), Gaps = 48/410 (11%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
+ I K ++ + DV+GK YLD ++ VN GH++ + +ALK QL KL HV SNL
Sbjct: 11 VKIVRGKGAYVY---DVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV--SNL 65
Query: 75 -THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQ 133
+P +L+EKL + F+ + GA A E ALK++ Y +KG KKK I +
Sbjct: 66 YYTEPQEELAEKLVEHS--GADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFE 122
Query: 134 NSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193
NS+HG T+GAL+ T +++ + L+ P D+E
Sbjct: 123 NSFHGRTMGALSATGQPKYQKGFEPLV--------PGFSYAPYN------------DIES 162
Query: 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253
L K ++ AA+I+EP +Q GG+ + +LK +REIC + + LI DE+ G GRTGK
Sbjct: 163 LKKAIDDETAAVIVEP-IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK 221
Query: 254 FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 313
FFA EH I PD + L+KG+ GG +P+ + +++ + + H ++ GNPL
Sbjct: 222 FFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTPGD------HGSTFGGNPL 274
Query: 314 ACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDP 373
AC AALA LE+ K+ +L+ + + + L L + R KG++ ++
Sbjct: 275 ACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIEL----- 329
Query: 374 EQIETFSKKFFVAALKNE-LLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 421
K V + LL+ G + +PP I+ K EI SA+
Sbjct: 330 ----EAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSAL 375
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 226 bits (578), Expect = 2e-69
Identities = 126/435 (28%), Positives = 207/435 (47%), Gaps = 22/435 (5%)
Query: 11 SSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVM 70
VI K + L D +G +Y D S GH I A+K Q ++ V
Sbjct: 11 GQPYPVISHGKGVY---LYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVY 67
Query: 71 LSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 130
S T +P KL++KLS L+ L F+ + G+ A E A+K++ ++ +G K K +
Sbjct: 68 RSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKIL 127
Query: 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190
SYHG T+GAL+++ ++ + SLL I+ P +
Sbjct: 128 SRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATE 187
Query: 191 LEILLKKN-HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249
LE +++ IAA I EP++ AG ++ Y K+++EIC++Y+I IADE+ G G
Sbjct: 188 LETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLG 247
Query: 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309
RTG FA EH + PD + L KG+ GY P++ + +D++ I + H+ S
Sbjct: 248 RTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPI--LRGSRSIMSGHTLS 305
Query: 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDV 368
NPL+ ALA LE K N+ ++ ++ + + K L + II + R KG++ +
Sbjct: 306 ANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVE- 364
Query: 369 IIEDPEQIETFSKKFFVAAL------KNELLLRPI--------GNTVYLMPPYILNKNEI 414
+ D + + FSK VA+ KN LLL P G+ V + PP + +E+
Sbjct: 365 FVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSEL 424
Query: 415 QHMTSAIFQTFNEVI 429
+ S ++ E++
Sbjct: 425 DELLSIFAKSVEEMM 439
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 222 bits (568), Expect = 1e-68
Identities = 122/392 (31%), Positives = 187/392 (47%), Gaps = 46/392 (11%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPV-IKLSEKL 86
LID G+RYLD S VN GH++ ++ +ALK Q KL HV SNL P +L+E+L
Sbjct: 25 LIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHV--SNLYRIPEQERLAERL 82
Query: 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
+ F+ + GA AVE A+K + Y Y KG + + I + ++HG TL +A
Sbjct: 83 VENSFADK--VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA 140
Query: 147 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 206
+ + E + L+ P + G D+E L AAI+
Sbjct: 141 GGQEKYLEGFGPLV--------PGFDQVPFG------------DIEALKAAITPNTAAIL 180
Query: 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266
IEP +Q GG+ +LK +R++C+ + LI DE+ G GRTGK FA E A + PD
Sbjct: 181 IEP-IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI 239
Query: 267 LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326
+ ++KGI GG+ PL + T++ + H +Y GNPLA A L++
Sbjct: 240 MAVAKGIGGGF-PLGACLATEEAAKG------MTPGTHGSTYGGNPLAMAVGNAVLDVIL 292
Query: 327 KDNILQRISQDMKKITKALTSLI-THPKII-NFRQKGMIWAFDVIIEDPEQIETFSKKFF 384
L + + + + L L+ P +I R KG++ ++ + +
Sbjct: 293 APGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVPNRD---------L 343
Query: 385 VAALKNELLL-RPIG-NTVYLMPPYILNKNEI 414
V AL++E LL G N V L+PP I+ + EI
Sbjct: 344 VQALRDEGLLTVGAGDNVVRLLPPLIITEEEI 375
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 219 bits (560), Expect = 9e-67
Identities = 126/417 (30%), Positives = 206/417 (49%), Gaps = 28/417 (6%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKLS 87
D +GKRY++ ++ W G S + +A Q+ KL H S+ +H PVI L+EKL
Sbjct: 44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYH-TFSHKSHGPVIDLAEKLV 102
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
++ + F+ + G+ A + +K+ ++Y G KKK I Q YHG T+ + ++T
Sbjct: 103 AMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLT 162
Query: 148 ----NIQSFKEIYTSLLNKTYIITT--PDS-RNINKGNSANEIA-RCAIFDLEIL-LKKN 198
N +SF L I+ T P R G S A R A +LE L L +
Sbjct: 163 GLPNNHRSFD------LPLDRILHTGCPHYYRFGLPGESEEAFATRLAN-ELEALILAEG 215
Query: 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 258
+ IAA I EP V AGG+I+ Y + ++ + Y+I L+ADE+ G GRTG F CE
Sbjct: 216 PDTIAAFIGEP-VMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCE 274
Query: 259 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNN-INIFLHSHSYSGNPLACCA 317
I PD L +SK ++ Y PLS V+ +K+Y+ I ++ I F H + SG+P+A
Sbjct: 275 TFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAV 334
Query: 318 ALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIE 377
AL L I + +++ ++ ++ L +L HP + R G+I A + ++ D
Sbjct: 335 ALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVE-LVADKATKT 393
Query: 378 TFSK------KFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
F + AA ++ ++ R +G+T+ PP I+ ++ M + ++V
Sbjct: 394 PFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 211 bits (540), Expect = 1e-63
Identities = 121/416 (29%), Positives = 196/416 (47%), Gaps = 47/416 (11%)
Query: 28 LIDVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLEHVMLSNL----THKPVIKL 82
L D G + LD ++ W VN+ G+ + A Q+ +L + N TH P I+L
Sbjct: 44 LWDSEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYY---NTFFKTTHPPAIEL 99
Query: 83 SEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLG 142
+ KL+ + H F+ + G+ A + L+M HYW KG KK I +N YHG T+
Sbjct: 100 AAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVA 159
Query: 143 ALAVTNIQSFKEIYTSLLNKTYI-----ITTPDSRNIN--------KGNSANEIARCAIF 189
SL Y+ + P +I+ + E A
Sbjct: 160 G-------------ASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAAR 206
Query: 190 DLEI-LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
LE +L+ + +AA I EP +Q AGG+I+ + Y ++ IC Y+I L+ADE+ G
Sbjct: 207 QLEAKILELGADNVAAFIGEP-IQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGF 265
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308
GRTG++F +H I PD + ++KG+T GY+P+ V D++ + + F H +Y
Sbjct: 266 GRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEG--GEFNHGFTY 323
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKK-ITKALTSLITHPKIINFRQKGMIWAFD 367
SG+P+A ALA L I + I++R+ D + K L L HP + R G++ A
Sbjct: 324 SGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAI- 382
Query: 368 VIIEDPEQIETFSKKFFVAAL------KNELLLRPIGNTVYLMPPYILNKNEIQHM 417
+++D E F V + N L++R +G+ + + PP ++ EI +
Sbjct: 383 ELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDEL 438
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 207 bits (529), Expect = 2e-62
Identities = 131/426 (30%), Positives = 206/426 (48%), Gaps = 24/426 (5%)
Query: 10 KSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV 69
K NL + + + + V GK YLD S V GH + + +A+K Q +KL H
Sbjct: 22 KDHPNLPVVKGEGCYYY---GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHG 78
Query: 70 MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129
+ ++ ++KL+E+L+ +T L F+ + GA A+E ALK++ H
Sbjct: 79 PSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYI------ 132
Query: 130 ICLQNSYHGETLGALAVTNIQS-FKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI 188
I +HG TLGAL+VT +S +++ Y LL Y P KG +
Sbjct: 133 ISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192
Query: 189 FDLEILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246
DLE L K ++AA+IIEP V GG I+ +LK +REIC+ + I LI DE+
Sbjct: 193 RDLESLFKHQVTPEEVAAVIIEP-VLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT 251
Query: 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH 306
G GRTG++FA + + PD + ++KGI G LPLS V+ + ++ + H
Sbjct: 252 GFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQ------WPLGSHGT 304
Query: 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-THPKIINFRQKGMIWA 365
++ GNP+AC AALATLE+ ++ +L ++ + L L HP I + R G++
Sbjct: 305 TFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIG 364
Query: 366 FDVIIEDPEQIETFSKKFFVAALKNELLLR---PIGNTVYLMPPYILNKNEIQHMTSAIF 422
+++ D E +K L+ LL GN + ++PP + K EI +
Sbjct: 365 IEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILD 424
Query: 423 QTFNEV 428
+ E
Sbjct: 425 EALTEY 430
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 207 bits (528), Expect = 4e-62
Identities = 132/437 (30%), Positives = 212/437 (48%), Gaps = 34/437 (7%)
Query: 12 SNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLEHVM 70
+ +V+ + +W + D+ G RYLD +S W VN+ G+ + +A QL L +
Sbjct: 28 NATMVVAKAEGAW---VTDIQGNRYLDGMSGLWCVNV-GYGRKELAEAAYEQLKTLSYFP 83
Query: 71 LSNLTHKPVIKLSEKLSSLTQYKLGH---CFYGSDGASAVEVALKMSFHYWYNKGFLNKK 127
L+ +H+P IKL+EKL+ LG F+ + G+ A E A K++ Y KG ++
Sbjct: 84 LTQ-SHEPAIKLAEKLNEW----LGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRY 138
Query: 128 KFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA-RC 186
KFI +YHG ++GALA T K Y L + PD + S + C
Sbjct: 139 KFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLEC 198
Query: 187 AIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246
++ + IAA+I+EP++ GG++M Y+K V+EIC + LI+DE+
Sbjct: 199 VKEIDRVMTWELSETIAAVIMEPIIT-GGGVLMPPQDYMKAVKEICQKHGALLISDEVIC 257
Query: 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH 306
G GRTGK F + + PD + ++KGIT YLPLS +IY + K F H +
Sbjct: 258 GFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVN 317
Query: 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL-TSLITHPKIINFRQKGMIWA 365
++ GNP AC AL LEI +N+++R +Q + + + L L HP + + R KG++
Sbjct: 318 TFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVG 377
Query: 366 F----DVIIEDPEQIETFSKKFFVAALKNELLLRPIG----------NTVYLMPPYILNK 411
D ++P + + VAA K + L+ IG N + L PP +++
Sbjct: 378 IELVNDKETKEPADNDKVAS--VVAACKEKGLI--IGKNGDTVAGYNNVLTLSPPLVISS 433
Query: 412 NEIQHMTSAIFQTFNEV 428
EI + + +
Sbjct: 434 EEIAFIVGTLKTALERI 450
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 205 bits (523), Expect = 2e-61
Identities = 111/416 (26%), Positives = 209/416 (50%), Gaps = 27/416 (6%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
G+R LD + W GH I +A++ Q +L++ + H +L+ +++
Sbjct: 40 YTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIA 99
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
+ L H F+ + G+ +V+ ALK++ Y +G ++ + I + YHG G ++V
Sbjct: 100 EIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVG 159
Query: 148 NIQSFKEIYTSLLNKTYIITTPDSRNINK-----------GNSANEIARCAIFDLEILLK 196
I ++ + +LL + P + ++ + A+E+ R ++
Sbjct: 160 GIVPNRKAFGALL--PGVDHLPHTLDLARNAFSKGQPEHGAELADELER-------LVTL 210
Query: 197 KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256
+ + IAA+I+EP V + G+++ YL+ +REIC+ + I LI DE+ G GR G FA
Sbjct: 211 HDASTIAAVIVEP-VAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA 269
Query: 257 CEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINI-FLHSHSYSGNPLAC 315
++ + PD L +KG+T G +P+ V + +I+++ I F H ++YSG+PLAC
Sbjct: 270 AQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLAC 329
Query: 316 CAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ 375
AALATL+++ ++ +L R ++ AL SL P +I+ R G++ A ++ P
Sbjct: 330 AAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVEL---APRD 386
Query: 376 IETFSKKF--FVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEVI 429
+ + + F+ + L++R G+ + L PP I+ + +I + + Q E I
Sbjct: 387 GKPGKRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEAQIDELFDILAQALKETI 442
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 202 bits (516), Expect = 2e-60
Identities = 122/419 (29%), Positives = 213/419 (50%), Gaps = 35/419 (8%)
Query: 28 LIDVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86
D G++ LD + W N GH I +A+ Q L++ + H +L+E+L
Sbjct: 43 YTDADGRKILDGTAGLWCCNA-GHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERL 101
Query: 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
+ L L H F+ + G+ +V+ ALK++ Y +G + + I + YHG G ++V
Sbjct: 102 AELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISV 161
Query: 147 TNIQSFKEIYTSLLN------KTYIITTPDSRN-INKGNSAN--EIARCAIFDLEILLKK 197
I + ++++ LL T + N +KG + E+A DLE L+
Sbjct: 162 GGIVNNRKMFGGLLPGVDHLPHTLDL----PENAFSKGQPEHGAELAD----DLERLVA- 212
Query: 198 NH--NKIAAIIIEPLVQCAG--GMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253
H + IAA+I+EP+ AG G+++ YL+ +REIC+ + I LI DE+ G GR G
Sbjct: 213 LHDASTIAAVIVEPM---AGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 269
Query: 254 FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYY--KNNINIFLHSHSYSGN 311
FA E + PD + +KG+T G +P+ V+ +D+IY++ + I F H ++YS +
Sbjct: 270 AFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFF-HGYTYSAH 328
Query: 312 PLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE 371
P+AC A LATL+I+ ++++ +R ++ A+ SL P +I+ R G++ ++
Sbjct: 329 PVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIEL--- 385
Query: 372 DPEQIETFSKKF--FVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
P ++ + F+ + LL+R G+T+ L PP I+ K +I + A+ V
Sbjct: 386 APRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 200 bits (512), Expect = 1e-59
Identities = 119/416 (28%), Positives = 200/416 (48%), Gaps = 22/416 (5%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
+ D GKRYLD ++ +V GH + + +A Q L L + H P I+L+E+L+
Sbjct: 46 IWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLA 105
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
+L L F+ + G+ AVE A K++ Y+ G K K I +YHG T GALA+T
Sbjct: 106 ALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAIT 165
Query: 148 NIQSFKEIYTSLLNKTY-IITTPDSRNINKGNSANEIARCAIFDLE-ILLKKNHNKIAAI 205
+ +FK + L+ + + T R G+ R A +E + + + +AA+
Sbjct: 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAV 225
Query: 206 IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPD 265
+EP VQ AGG Y + VREIC+ Y++ L++DE+ GR G+ F CE PD
Sbjct: 226 FLEP-VQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD 284
Query: 266 FLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIF 325
+ +KGIT GY PL ++ +D+++ + +FLH +++ G+P++ ALA L+IF
Sbjct: 285 IITCAKGITSGYSPLGAMIASDRLFEPFL--DGPTMFLHGYTFGGHPVSAAVALANLDIF 342
Query: 326 NKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIE-------DPEQIET 378
++ +L + + L L+ P + + R G + +++ + ++ E
Sbjct: 343 EREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESER 402
Query: 379 FSKKFFVAAL-KNELLLR------PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427
+ F AL + L R P+ V L PP I + E + + E
Sbjct: 403 LLRGFLSPALFEAGLYCRADDRGDPV---VQLAPPLISGQEEFDEIEQILRSVLTE 455
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 200 bits (510), Expect = 2e-59
Identities = 119/413 (28%), Positives = 205/413 (49%), Gaps = 20/413 (4%)
Query: 30 DVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLEHVM-LSNLTHKPVIKLSEKLS 87
D G+RYLD I W VN+ G+ + A+ +Q +L + ++T+ P +L+ KL+
Sbjct: 47 DADGRRYLDGIGGMWCVNV-GYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLA 105
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
L L H F + G++AV+ AL+ +Y+ +G KK I ++YHG T ++T
Sbjct: 106 ELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLT 165
Query: 148 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI----FDLEILLKKNHNKIA 203
+ + + + + +++P+ G S E A C F+ +IL + IA
Sbjct: 166 GKAADRTEFDYASDLVHHLSSPNPYRRPAGMS--EAAFCDFLVDEFEDKIL-SLGADNIA 222
Query: 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE-HAEI 262
A I EP + +GG+I+ Y +REIC Y+I I+DE+ G GR G FFA E I
Sbjct: 223 AFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI 281
Query: 263 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNI-NIFLHSHSYSGNPLACCAALAT 321
PD + +KG+T GY PL V+ ++++ + I N N+F H +YSG+P+AC AAL
Sbjct: 282 QPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKN 341
Query: 322 LEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIED------PEQ 375
+EI ++ + + + + + L SL P + + R ++ + + + PE
Sbjct: 342 IEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPED 401
Query: 376 IETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
I ++ + LL+RP+ + L PP I+ + +I + + + E
Sbjct: 402 I-AIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEET 453
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 198 bits (505), Expect = 1e-58
Identities = 126/411 (30%), Positives = 210/411 (51%), Gaps = 44/411 (10%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL---EHVMLSNLTHKPVIKLSE 84
L+D G+ ++D + + + GH N + A++NQL K +L L L++
Sbjct: 76 LVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAM----LAK 131
Query: 85 KLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL 144
L++LT KL + F+ + G +VE ALK++ Y +G K FI ++HG++LGAL
Sbjct: 132 TLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIATSGAFHGKSLGAL 188
Query: 145 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204
+ T +F++ + LL P R++ GN E R A+ + KK + +AA
Sbjct: 189 SATAKSTFRKPFMPLL--------PGFRHVPFGNI--EAMRTALSEC----KKTGDDVAA 234
Query: 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264
+I+EP +Q GG+I+ YL VR++C+ + LI DE+ G GRTGK FACEH + P
Sbjct: 235 VILEP-IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQP 293
Query: 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324
D LCL+K + GG +P+ + T+++++ ++ N FLH+ ++ GNPLAC AALAT+ +
Sbjct: 294 DILCLAKALGGGVMPIGATIATEEVFSVLFD----NPFLHTTTFGGNPLACAAALATINV 349
Query: 325 FNKDNILQRISQDMKKITKALTSLI-THPKIIN-FRQKGMIWAFDVIIEDPEQIETFSKK 382
+ N+ + Q + L +P ++ R KGM+ A + + D E F+ +
Sbjct: 350 LLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFV--DNEIGYNFASE 407
Query: 383 FF-----VAALKNELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
F VA N T+ + PP L + + + A + +
Sbjct: 408 MFRQRVLVAGTLNN------AKTIRIEPPLTLTIEQCEQVLKAARKALAAM 452
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 195 bits (499), Expect = 6e-58
Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 45/431 (10%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
LVI + W + DV G YLD + V GH++ + KA+K Q K H L++
Sbjct: 38 LVIERGEGVW---VEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDF 94
Query: 75 THKPVIKLSEKLSSLT----QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI 130
++P ++L+E+L + + K+ F+ + G + E A+K++ + +K I
Sbjct: 95 YYEPAVELAERLVEIAPGGFEKKV---FFTNSGTESNEAAIKIA------RYHTGRKYII 145
Query: 131 CLQNSYHGETLGALAVTNIQSFKEIYTS----LLNKTYIITTPDS-RNINKGNSANEIAR 185
++HG T G+L++T + K + L+ + P+ RN + E
Sbjct: 146 AFLGAFHGRTYGSLSLT---ASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGN 202
Query: 186 CAIFDLE-ILLKK--NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242
+ +E L KK ++AAII+EP +Q GG ++ + K +R++ + Y I LI D
Sbjct: 203 AVLDFIEDYLFKKLVPPEEVAAIIVEP-IQGEGGYVVPPKNFFKELRKLADKYGILLIDD 261
Query: 243 EIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIF 302
E+ G GRTGK FA EH + PD + L+K I GG LPL V+ + +
Sbjct: 262 EVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVI----------GRAELMFL 310
Query: 303 ---LHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFR 358
H++++ GNP+A AALATLE ++ +L+ + + + K L L + I + R
Sbjct: 311 PPGSHANTFGGNPVAAAAALATLEEL-EEGLLENAQKLGEYLRKELKELKEKYEFIGDVR 369
Query: 359 QKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQHM 417
G++ +++ + E K A K LLL G + + ++PP I+ + E
Sbjct: 370 GLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIG 429
Query: 418 TSAIFQTFNEV 428
+ + E+
Sbjct: 430 LEILEEAIKEL 440
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 193 bits (494), Expect = 1e-57
Identities = 105/395 (26%), Positives = 183/395 (46%), Gaps = 48/395 (12%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL-THKPVIKLSEKLSS 88
DV GK YLD + VN GH++ + +A+ QL L HV SNL +P I L+E+L
Sbjct: 39 DVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHV--SNLFATEPQIALAERLVE 96
Query: 89 LTQY-KLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
L + G F+ + GA A E A K++ + K + + +HG T+GALA+T
Sbjct: 97 LLGAPEGGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALT 149
Query: 148 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207
+ + + L ++ G D++ L + AA+ +
Sbjct: 150 GQPAKRAPFEPLP--------GGVEHVPYG------------DVDALAAAVDDDTAAVFL 189
Query: 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267
EP +Q G++ + YL REI + + L+ DE+ G GRTG +FA +H + PD +
Sbjct: 190 EP-IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV 248
Query: 268 CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327
L+KG+ GG LP+ + + LH ++ GNP+AC AALA L+
Sbjct: 249 TLAKGLGGG-LPIGACLAFGP-AADLLTPG-----LHGSTFGGNPVACAAALAVLDTIAS 301
Query: 328 DNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAA 387
+ +L+ + +++ + +L HP + + R +G++ + + +E AA
Sbjct: 302 EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAPVAKAVEA-------AA 353
Query: 388 LKNELLLRPIG-NTVYLMPPYILNKNEIQHMTSAI 421
+ L+ + + + L PP I+ ++ +A+
Sbjct: 354 REAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAAL 388
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 191 bits (486), Expect = 2e-56
Identities = 116/419 (27%), Positives = 180/419 (42%), Gaps = 44/419 (10%)
Query: 16 VIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT 75
V++ K + W DV GK+Y D +S++ GH + I AL NQ KL S
Sbjct: 16 VLKRGKGVFVW---DVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL--TSRAF 70
Query: 76 HKPVIKLSEK-LSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFL--NKKKFICL 132
+ V+ L+EK ++ L Y + GA A E ALK + + Y + N+ K I
Sbjct: 71 YNDVLGLAEKYITDLFGYD--KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFC 128
Query: 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLE 192
++ G T+GA + + + + ++ D + LE
Sbjct: 129 NGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYND-----------------VEALE 171
Query: 193 ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTG 252
LL+ +AA I+EP +Q G+I+ D YLK V E+C YN+ LI DEI G GRTG
Sbjct: 172 KLLQDP--NVAAFIVEP-IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG 228
Query: 253 KFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNP 312
K A +H + PD + L K ++GG P+S V+ D + I H +Y GNP
Sbjct: 229 KLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLV------IKPGEHGSTYGGNP 282
Query: 313 LACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIIN-FRQKGMIWAFDVIIE 371
LAC A+ LE+ ++ + + + + L L+ + R KG++ A
Sbjct: 283 LACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVF--- 339
Query: 372 DPEQIETFSKKFFVAALK-NELLLRPIG-NTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
D LK N LL +P N + PP ++ K ++ I +
Sbjct: 340 DHSDGVNAWD--LCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 191 bits (487), Expect = 2e-56
Identities = 121/394 (30%), Positives = 201/394 (51%), Gaps = 38/394 (9%)
Query: 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86
+LID G ++D + + + GH N + A++NQL K + + L L++ L
Sbjct: 68 TLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK-QPLHSQELLDPLRALLAKTL 126
Query: 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
++LT KL + F+ + G +VE ALK++ Y +G K FI ++HG++LGAL+
Sbjct: 127 AALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIAASGAFHGKSLGALSA 183
Query: 147 TNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSA---NEIARCAIFDLEILLKKNHNKIA 203
T +F++ + LL P ++ G+ + C KK + +A
Sbjct: 184 TAKPAFRKPFMPLL--------PGFHHVAFGDIEAMLKALNEC---------KKTGDDVA 226
Query: 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 263
AII+EP +Q GG+I+ YL VR +C+ + LI DE+ G GRTGK FACEH +
Sbjct: 227 AIILEP-IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQ 285
Query: 264 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323
PD LCL+K + GG +P+ + T+ +++ ++ N FLH+ ++ GNPLAC AALAT+
Sbjct: 286 PDILCLAKALGGGVMPIGATIATEAVFSVLFD----NPFLHTTTFGGNPLACAAALATIN 341
Query: 324 IFNKDNILQRISQDMKKITKALTSLIT-HPK-IINFRQKGMIWAFDVIIEDPEQIETFSK 381
+ N+ + + + L +P II R KG++ A + D E F+K
Sbjct: 342 ELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFR--DNEIGYAFAK 399
Query: 382 KFFVAALKNELLLRPIGN--TVYLMPPYILNKNE 413
+ F +N L+ + N ++ + PP + +
Sbjct: 400 ELF---QQNILVAGTLNNAKSIRIEPPLTITIEQ 430
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 190 bits (485), Expect = 1e-55
Identities = 111/421 (26%), Positives = 204/421 (48%), Gaps = 33/421 (7%)
Query: 16 VIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT 75
V+ S + + + DV GK+Y+D V+ G+ + ++ + +K Q+ KL T
Sbjct: 57 VLASAEGIY---IEDVDGKKYMD-FHGNNVHQLGYGHPHVIEKVKEQMAKLP-FSPRRFT 111
Query: 76 HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNS 135
++ I+ +EKL+ + +L + G SA+ +ALK++ H K + L +S
Sbjct: 112 NETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI------TGNFKVVSLWDS 165
Query: 136 YHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILL 195
+HG +L A++V F++ L+ I S ++ A + LE ++
Sbjct: 166 FHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADY-LEYVI 224
Query: 196 KKNHNKIAAIIIEPL----VQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRT 251
+K I A I E + VQ Y K VREIC+ +N+ LI DEI G GRT
Sbjct: 225 EK-EGGIGAFIAEAVRNTDVQVP------SKAYWKRVREICDKHNVLLIIDEIPNGMGRT 277
Query: 252 GKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGN 311
G++F + I PD LC+ KG+ GG +P++ ++T DK Y I L +++ +
Sbjct: 278 GEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDK------YNTAAQISLGHYTHEKS 331
Query: 312 PLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFDVII 370
PL C AALAT+E+ ++ +L+++ D + + + L + +P I + R G++W +++
Sbjct: 332 PLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVT 391
Query: 371 EDPEQIETF--SKKFFVAALKNELLLR-PIGNTVYLMPPYILNKNEIQHMTSAIFQTFNE 427
+ + + ++ L N L + GN + L PP I+ + E+ + + + +
Sbjct: 392 DRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAK 451
Query: 428 V 428
+
Sbjct: 452 I 452
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 187 bits (477), Expect = 4e-54
Identities = 121/418 (28%), Positives = 213/418 (50%), Gaps = 20/418 (4%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLE-HVMLSN 73
LVI + S+ + D++GK+YLDA++ W G S + A QLNKL + N
Sbjct: 73 LVIEKSEGSYVY---DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWN 129
Query: 74 LTHKPVIKLSEKLSSL-TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132
T KP + L+++L + T K+G F+ + G+ A + +K+ ++Y G NKKKFI
Sbjct: 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 189
Query: 133 QNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITT--PDS-RNINKGNSANEIARCAIF 189
SYHG TL + +++ + + + + L +++ T P R G + E +
Sbjct: 190 SKSYHGSTLISASLSGLPALHQKFD--LPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAD 247
Query: 190 DLE-ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
+LE ++LK+ IAA I EP V AGG+I + Y + ++ + Y+I IADE+
Sbjct: 248 NLENLILKEGPETIAAFIAEP-VMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF 306
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIY-YKNNINIFLHSHS 307
GR G F C+ I PD + L+K ++ Y+P+ V+ + +I + I+ N + F H +
Sbjct: 307 GRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366
Query: 308 YSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFD 367
YSG+P++C AL L+I+ + NI + +++ + + + P I R G+I +
Sbjct: 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTE 426
Query: 368 VIIEDPEQIETFSKKFFVAAL------KNELLLRPIGNTVYLMPPYILNKNEIQHMTS 419
+++ + F ++ V A K +L+R G+ + + PP I+ E+ + S
Sbjct: 427 -FVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIITPEEVDELIS 483
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 176 bits (448), Expect = 2e-50
Identities = 121/425 (28%), Positives = 196/425 (46%), Gaps = 35/425 (8%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHV-MLSNLTHKPVIKLSEKL 86
L D GKRYLD +S W G+ + A Q+ +L + M + TH VI+LSE L
Sbjct: 48 LWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELL 107
Query: 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
SL H Y + G+ A EV ++ YW G KK I N YHG TL A A+
Sbjct: 108 FSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATAL 167
Query: 147 TNIQSFKEIYTSLLNKTYIITTPDSRNI-------NKGN-SANEIA-RCAIFDLEILLKK 197
++ E+ + PD +I N G + E R A+ E +L+
Sbjct: 168 GGMKFMHEMGGLI---------PDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL 218
Query: 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 257
+A + EP Q AGGMI Y ++ IC Y++ L ADE+ G GRTG++FA
Sbjct: 219 GAENVAGFVAEPF-QGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAH 277
Query: 258 EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317
EH PD L ++KG+T GY+P+ ++ + +I ++ + +F H +YSG+P+A
Sbjct: 278 EHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG--GVFAHGLTYSGHPVAAAV 335
Query: 318 ALATLEIFNKDNILQRISQDMKK-ITKALTSLI-THPKIINFRQKGMIWAFDVIIEDPEQ 375
A+A L+ + ++ R+ D + + L + HP + + G++ A ED
Sbjct: 336 AIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQ-FAEDKAT 394
Query: 376 IETFSKKFFVA------ALKNELLLRPIGNTVYLMPPYILNKNEIQHMTS----AIFQTF 425
+ F+ + +A + +++R + + P + + EI + A+ +T
Sbjct: 395 RKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454
Query: 426 NEVIT 430
EV
Sbjct: 455 REVGV 459
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 175 bits (446), Expect = 4e-50
Identities = 121/433 (27%), Positives = 201/433 (46%), Gaps = 64/433 (14%)
Query: 13 NNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNL-FGHSNSYINKALKNQLNKLEHV-- 69
N +VI + S+ W D G+RYLD SS VN GH + + A++ Q +L V
Sbjct: 35 NPMVIAGAEGSYVW---DYEGRRYLD-FSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP 90
Query: 70 MLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129
+N + + ++ L F+ + GA A E A++M+ + + K
Sbjct: 91 AHANDARS---EAARLIAERAPGDLSKVFFTNGGADANEHAVRMA------RLHTGRPKV 141
Query: 130 ICLQNSYHGETLGALAVT-------------NIQSFKEIYTSLLNKTYIITTPDSRNINK 176
+ SYHG T A+ +T + F + L + TT
Sbjct: 142 LSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTE------- 192
Query: 177 GNSANEIARCAIFDLE-ILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNY 235
E R A+ LE ++ + + IAAI++E + AG +++ YL VRE+C+ +
Sbjct: 193 ---EEECER-ALAHLERVIELEGPSTIAAILLESVPGTAG-ILVPPPGYLAGVRELCDRH 247
Query: 236 NIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYY 295
I LIADE+ G GRTGK+FA EH + PD + +KG+ GY+PL V ++ I +
Sbjct: 248 GIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD 307
Query: 296 KNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQ---RISQDMKKITKALTSLIT-H 351
+ + +YSG+PLAC AA+AT+ ++ I++ RI ++ + L L H
Sbjct: 308 R----PYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEV--LGPGLRELAERH 361
Query: 352 PKIINFRQKGMIWAFDVIIEDPEQIETFSKKF--------FVAALKNELLLRPI-GNTVY 402
P + R G+ WA + ++ D E E + AA K LL + GN ++
Sbjct: 362 PSVGEVRGLGVFWALE-LVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIH 420
Query: 403 LMPPYILNKNEIQ 415
++PP + ++E++
Sbjct: 421 VVPPCTVTEDEVR 433
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 174 bits (444), Expect = 7e-50
Identities = 119/431 (27%), Positives = 206/431 (47%), Gaps = 29/431 (6%)
Query: 16 VIRSLKNSWKWSLIDVSGKRYLDAISSWW-VNL-FGHSNSYINKALKNQLNKLEHVM-LS 72
V+ S K + L D SG + LDA + W VN+ +G + I +A Q+ +L +
Sbjct: 31 VLASAKGAT---LTDASGHQLLDAFAGLWCVNVGYGQES--IVEAAAEQMRELPYATGYF 85
Query: 73 NLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICL 132
+ +P I+L+ KL+ L H ++ G+ AV+ A++ HYW G +KK+FI L
Sbjct: 86 HFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISL 145
Query: 133 QNSYHGE-TLGALAVTNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFD 190
+ YHG ++GA +T + +F + L + I +P RN + IA
Sbjct: 146 ERGYHGSSSVGA-GLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAA----S 200
Query: 191 LEILLKK----NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246
+ L K + +AA EP +Q +GG+I+ +LK +RE C I +ADE+
Sbjct: 201 VAALRAKVAELGADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT 259
Query: 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL-HS 305
G GRTG FACE + PD + ++KG+T GY+P+ V+ +D +Y I + H
Sbjct: 260 GFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHG 319
Query: 306 HSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA 365
++YS +P++ L L ++++ +L + + L +L HP + + R +G++ A
Sbjct: 320 YTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGA 379
Query: 366 FDVIIEDPEQIETF------SKKFFVAALKNELLLRPIGNTVY-LMPPYILNKNEIQHMT 418
+++ D F + + F A N L+ R G+ V P + E +
Sbjct: 380 LELVA-DKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIF 438
Query: 419 SAIFQTFNEVI 429
+T ++V+
Sbjct: 439 ERTRKTLDDVL 449
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 167 bits (425), Expect = 1e-47
Identities = 112/408 (27%), Positives = 188/408 (46%), Gaps = 50/408 (12%)
Query: 30 DVSGKRYLDAISSW-WVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS 88
DV GKRYLD +S++ VN GH + I KAL Q LT ++
Sbjct: 33 DVEGKRYLDFLSAYSAVNQ-GHCHPKIVKALTEQA--------QKLTLSSRAFYNDVFGE 83
Query: 89 LTQYKLGHCFYGSD-------GASAVEVALKMSFHYWYNKGFL--NKKKFICLQNSYHGE 139
+Y +G D GA AVE A+K++ + Y + N+ + + ++HG
Sbjct: 84 FAEYV--TKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGR 141
Query: 140 TLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNH 199
TLGA++++ + + + P + I N LE L+ +
Sbjct: 142 TLGAISMSTDPDSRTNFGPYV--------PGFKKIPYNNLE---------ALEEALEDHG 184
Query: 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 259
+ A I+EP +Q G+++ D YLK VRE+C +N+ LIADEI G GRTGK +H
Sbjct: 185 PNVCAFIVEP-IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDH 243
Query: 260 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 319
+ PD + L K ++GG P+S V+ D + +I H +Y GNPLAC A+
Sbjct: 244 ENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGE------HGSTYGGNPLACAVAV 297
Query: 320 ATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETF 379
A LE+ ++ + + ++ + +I + + P I R +G++ A I+ D +
Sbjct: 298 AALEVLEEEKLAEN-AEKLGEIFRDQLKKLPKPIITEVRGRGLLNA---IVIDESKTGRT 353
Query: 380 SKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426
+ + + LL +P GN + L PP ++ + ++ I + +
Sbjct: 354 AWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 162 bits (413), Expect = 5e-46
Identities = 117/412 (28%), Positives = 192/412 (46%), Gaps = 54/412 (13%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHK-PVIKLSEKL 86
L DV GK YLD + VN GH + KA+ Q L HV SN+ H P ++L+++L
Sbjct: 9 LYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHV--SNVYHTIPQVELAKRL 66
Query: 87 --SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKK-------FICLQNSYH 137
SS F+ + G A E A+K + Y + K F+ NS+H
Sbjct: 67 VASSFAD----RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFH 122
Query: 138 GETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKK 197
G TLGALA+T+ + ++ + L+ P + GN E AR I
Sbjct: 123 GRTLGALALTSKEQYRTPFEPLM--------PGVTFVEYGNL--EAARKLI--------- 163
Query: 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 257
K AA+ +EP VQ GG+ +L+ +R +C+ L+ DE+ G GRTG +A
Sbjct: 164 QKGKTAAVFVEP-VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAH 222
Query: 258 EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317
E + PD + L+K + GG LP+ V+ T+K+ ++I + H +++G PL C A
Sbjct: 223 EAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPGD------HGSTFAGGPLVCNA 275
Query: 318 ALATLEIFNKDNILQRISQDMKKITKALT-SLITHPKIINFRQKGMIWAFDVIIEDPEQI 376
ALA L+ +K L +++ + + + L L +P + R G++ V I Q+
Sbjct: 276 ALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLL----VGI----QL 327
Query: 377 ETFSKKFFVAALKNELLLRPI--GNTVYLMPPYILNKNEIQHMTSAIFQTFN 426
+ + A + LL+ G+ V L+PP ++++ E++ +
Sbjct: 328 DVPAGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLP 379
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 164 bits (416), Expect = 5e-46
Identities = 112/426 (26%), Positives = 194/426 (45%), Gaps = 35/426 (8%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
LV +N+ W D+ G Y+D +S V GH+N + KA+K Q +KL H
Sbjct: 25 LVPVKAENAKVW---DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYG 81
Query: 75 THKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQN 134
+ L+EKL + +G G+ A + A+K + + + ++K +
Sbjct: 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFA------RAYTKRRKILSYLR 135
Query: 135 SYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEIL 194
SY+G T GA+++T + L+ + I PD G C + +E +
Sbjct: 136 SYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGS---CKMECVEYI 192
Query: 195 LKKNHNKI-----AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249
+K ++ AA+ EP +Q GMI+ Y K +++I + + I L+ DE+ G G
Sbjct: 193 KEKFEGEVYAEGVAALFAEP-IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251
Query: 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309
RTGK+FA EH + PD + L K + GG LP+S + +I +S + H+ + S
Sbjct: 252 RTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDS------LPPLAHAFTLS 304
Query: 310 GNPLACCAALATLEIFNKDNILQRISQ----DMKKITKALTSLITHPKIINFRQKGMIWA 365
GNP+A AALA +E + N+L+R + K++ + H I + R G++
Sbjct: 305 GNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKK---HELIGDVRGIGLMIG 361
Query: 366 FDVII--EDPEQIETFSKKFFVAALKNELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIF 422
D++ E E+ + K A + L++ GN + + PP + K + +
Sbjct: 362 VDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILE 421
Query: 423 QTFNEV 428
+ +V
Sbjct: 422 EAIEDV 427
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 162 bits (412), Expect = 2e-45
Identities = 113/433 (26%), Positives = 189/433 (43%), Gaps = 36/433 (8%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
+ W DV GK YLD ++ GH++ + + + + L + +L
Sbjct: 23 TAFAKAQGCWVT---DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDL 79
Query: 75 THKPVIKLSEKLSS-LTQYKLGHC--FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFIC 131
T E L + + + K+ + F G GA AVE A+K++ K + + I
Sbjct: 80 TTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLA------KTYTGRTNVIS 133
Query: 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDL 191
+HG T+GALAVT K L+ + P G + +I
Sbjct: 134 FSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYF 193
Query: 192 EILLKKNHN---KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
E ++ + K AA+I+E +Q GG++ S +L+ +RE+ ++I LI DE+ G
Sbjct: 194 ENFIEDVESGVDKPAAVILEA-IQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF 252
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308
GR+G FA EHA I PDF+ +SK + GG LPL+ V+ +++ H+ ++
Sbjct: 253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLA-VLLIAPEFDAWQPAG------HTGTF 304
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFD 367
GN LA L + DN+ Q + ++IT L +I HP I N R +G++
Sbjct: 305 RGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIM 364
Query: 368 VIIED--PEQIETFSKKFFVAA------LKNELLLRPIG---NTVYLMPPYILNKNEIQH 416
++ E + + + +AA +N LLL G L+ P +++ E +
Sbjct: 365 IVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEE 424
Query: 417 MTSAIFQTFNEVI 429
S Q E +
Sbjct: 425 GISRFKQAVEEAL 437
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 156 bits (396), Expect = 2e-43
Identities = 113/403 (28%), Positives = 178/403 (44%), Gaps = 54/403 (13%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L DV G R +D S V GHS+ + A++ Q+ + H ++ + L+EKL+
Sbjct: 27 LEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLN 86
Query: 88 SLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 145
+ F+ S GA AVE A+K++ + + + + + +HG T +A
Sbjct: 87 RIAPGSGPKKSVFFNS-GAEAVENAVKIA------RSYTGRPGVVAFDHGFHGRTNMTMA 139
Query: 146 VT-NIQSFK--------EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 196
+T + +K E+Y + L Y D + G A + D+
Sbjct: 140 LTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELA-AARAIFVIDVGA--- 195
Query: 197 KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256
N +AA++IEP VQ GG I+ ++ + + C + I IADE+ G RTG FA
Sbjct: 196 ---NNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFA 251
Query: 257 CEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH------SYSG 310
CEH PD + +K + G LPLS V I +Y+G
Sbjct: 252 CEHEGPEPDLITTAKSLADG-LPLSGVT------------GRAEIMDAPAPGGLGGTYAG 298
Query: 311 NPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVI 369
NPLAC AALA L I + +++R Q + +T LT+L P+I + R G + A +++
Sbjct: 299 NPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358
Query: 370 IEDPEQIE---TFSKKFFVAALKNELLLRPI---GNTVYLMPP 406
DP E +++ AA LLL GN + +PP
Sbjct: 359 --DPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPP 399
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 156 bits (396), Expect = 3e-43
Identities = 108/425 (25%), Positives = 192/425 (45%), Gaps = 67/425 (15%)
Query: 16 VIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT 75
V K S L D GK Y+D + +GH+N + +AL ++++ +
Sbjct: 20 VFEKAKGST---LWDEDGKEYIDFFAGAGALNYGHNNPKLKQAL------IDYLADDGII 70
Query: 76 HKPVIKLSEK---LSSLTQ---------YKLGHCFYGSDGASAVEVALKMSFHYWYNKGF 123
H + K L + + YK+ F G G +AVE ALK++ +
Sbjct: 71 HSLDMATEAKREFLETFNEIILKPRGLDYKVQ--FPGPTGTNAVESALKLA------RKV 122
Query: 124 LNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEI 183
+ + N++HG TLG+L+VT + ++ L+ P +
Sbjct: 123 TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNV--SRMPYDGYLGGDVDTIAY 180
Query: 184 ARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLI 240
E LL+ + + AA+I+E VQ GG+ + +L+ + ++C ++I LI
Sbjct: 181 -------FEKLLEDSSSGVDLPAAVILET-VQGEGGINVASDEWLQRLEKLCRRHDILLI 232
Query: 241 ADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNIN 300
D+I GCGRTG FF+ E A I PD +CLSK I+G LPL+L + K ++
Sbjct: 233 VDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTL----------IKPELD 282
Query: 301 IFL---HSHSYSGNPLACCAALATLEIFNKDNILQR-ISQDMKKITKALTSLI-THPKII 355
++ H+ ++ GN LA A A LE + D+ ++ + + + I + L ++ +P++I
Sbjct: 283 VWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELI 342
Query: 356 -NFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR---PIGNTVYLMPPYILNK 411
R +G++ + D + K AA +N L++ P + L+PP +++
Sbjct: 343 KQVRGRGLMQGIECGDGD------LAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDE 396
Query: 412 NEIQH 416
+Q
Sbjct: 397 ETLQQ 401
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 152 bits (385), Expect = 3e-42
Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 61/401 (15%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89
D G+RYLD I+ VN+ GH++ + + QL KL V H+ ++ E+LS
Sbjct: 20 DSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV-VAGPMFEHEEKEEMLEELSKW 78
Query: 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNI 149
Y+ + + G+ G AVE ALK + + + +K+ I + N++HG T+GAL+ T
Sbjct: 79 VNYE--YVYMGNSGTEAVEAALK------FARLYTGRKEIIAMTNAFHGRTMGALSATWK 130
Query: 150 QSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEP 209
++E + L+ P ++I + E A+ AI + AA+I EP
Sbjct: 131 PKYREDFEPLV--------PGFKHIPFNDV--EAAKEAI----------TKETAAVIFEP 170
Query: 210 LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCL 269
+Q GG++ ++K +R++ + LIADE+ G RTGKF A EH ++ PD + +
Sbjct: 171 -IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTM 228
Query: 270 SKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDN 329
KGI G +P+SL +T + H ++ GNPLAC A TL I ++
Sbjct: 229 GKGIGNG-VPVSLTLTNFDVERG----------KHGSTFGGNPLACKAVAVTLRILRRER 277
Query: 330 ILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALK 389
++++ + +I +++ R +G++ ++++ P +V L+
Sbjct: 278 LVEKAGEKFIEIKGE--------RVVTTRGRGLM--IGIVLKKP-------VGKYVEELQ 320
Query: 390 NE-LLLRPIGNTVY-LMPPYILNKNEIQHMTSAIFQTFNEV 428
N L+ G V L+PP I++K+ ++ SAI N++
Sbjct: 321 NRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 151 bits (385), Expect = 1e-41
Identities = 105/396 (26%), Positives = 178/396 (44%), Gaps = 53/396 (13%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-LTHKPVIKLSEKLSS 88
D GK Y+D V GH + + KALK Q KL H +SN T++P ++L++KL
Sbjct: 36 DQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNVFTNEPALRLAKKLID 93
Query: 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN 148
T + F+ + GA A E A K++ Y ++ K + I NS+HG TL ++V
Sbjct: 94 ATFAE--RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGG 151
Query: 149 IQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208
+ + + G +I DL + + A+++E
Sbjct: 152 QPKYSDGF--------------------GPKPADITHVPFNDLAAVKAVIDDHTCAVVVE 191
Query: 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 268
P+ Q GG+I +L+ +RE+C+ +N LI DE+ G GRTG FA H + PD L
Sbjct: 192 PI-QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILT 250
Query: 269 LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328
+K + GG+ P+ ++TT +I + + H +Y GNPLAC A A +I N
Sbjct: 251 SAKALGGGF-PIGAMLTTAEIASH------FKVGTHGSTYGGNPLACAVAEAVFDIINTP 303
Query: 329 NILQRISQDMKKITKALTSLITHPKIIN--------FRQKGMIWAFDVIIEDPEQIETFS 380
+L+ + ++ L + IN R G++ + E Q + +
Sbjct: 304 EVLEGVKARRQRFVDGL-------QKINQKYGVFSEIRGMGLL----IGAELKPQYKGRA 352
Query: 381 KKFFVAALKNELLLRPIG-NTVYLMPPYILNKNEIQ 415
+ F AA + +++ G + + P ++ + +I
Sbjct: 353 RDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADID 388
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 152 bits (386), Expect = 2e-41
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 61/424 (14%)
Query: 21 KNSWKWSLIDVSGKRYLDAISSW-WVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPV 79
K S W D GK+YLD +S++ VN GH + I KAL Q KL + S +
Sbjct: 65 KGSRIW---DPEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKL--TLSSRAFYNDK 118
Query: 80 IKLSEKLSSLTQYKLGHCFYGSD-------GASAVEVALKMSFHYWYNKGFL--NKKKFI 130
+ LT +G D GA VE A+K++ + Y K + N+ +
Sbjct: 119 FPEFAEY--LTSM------FGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIV 170
Query: 131 CLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFD 190
+HG TL A++++ + LL P ++ G+ +
Sbjct: 171 SCCGCFHGRTLAAISMSCDNEATRGFGPLL--------PGHLKVDFGD---------LDA 213
Query: 191 LEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGR 250
LE + +++ ++IAA + EP +Q G+++ YLK VRE+C+ +N+ +IADEI G R
Sbjct: 214 LEKIFEEDGDRIAAFLFEP-IQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR 272
Query: 251 TGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSG 310
TGK AC+ E+ PD + L K + GG +P+S V+ + I H ++ G
Sbjct: 273 TGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGE------HGSTFGG 326
Query: 311 NPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT--HPKII-NFRQKGMIWAFD 367
NPLA A+A L++ + + +R S + + + I PK+I R +G+ +
Sbjct: 327 NPLASAVAMAALQVVQDEKLAER-SAKLGQELRDQLQKIQKQFPKLIKEVRGRGL---LN 382
Query: 368 VIIEDPEQIETFSKKFFVAALK-NELLLRPI-GNTVYLMPPYILNKNEIQHMTSAIFQTF 425
++ + ++ S LK LL +P + L PP ++++E+Q + A
Sbjct: 383 AVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKA----L 438
Query: 426 NEVI 429
++V+
Sbjct: 439 SDVL 442
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 149 bits (379), Expect = 4e-41
Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 33/320 (10%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN-LTHKPVIKLSEKLSS 88
D GK Y+D VN GH++ + KAL Q +KL H + N T++PV++L++KL
Sbjct: 31 DQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH--IGNGYTNEPVLRLAKKLVD 88
Query: 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTN 148
T F+ + GA A E ALK++ Y +K +K + + +NS+HG TL ++V
Sbjct: 89 ATFAD--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGG 146
Query: 149 IQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIE 208
+ + + L I DL +K A+I+E
Sbjct: 147 QPKYSQGFAPL--------------------PGGIKHAPYNDLAAAKALISDKTCAVIVE 186
Query: 209 PLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLC 268
P +Q GG++ D +LK +RE+C+ +N LI DE+ G GRTG+ +A H + PD L
Sbjct: 187 P-IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILT 245
Query: 269 LSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328
+K + GG+ P+ ++TT + ++ + H +Y GNPLAC A L++ N
Sbjct: 246 SAKALGGGF-PIGAMLTTTE------IAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTP 298
Query: 329 NILQRISQDMKKITKALTSL 348
+L + Q L +
Sbjct: 299 ELLAGVKQRHDLFVDGLEKI 318
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 148 bits (376), Expect = 2e-40
Identities = 118/434 (27%), Positives = 195/434 (44%), Gaps = 66/434 (15%)
Query: 21 KNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI 80
+N W DV G+ YLD V GH + + A++ QL KL H L ++P +
Sbjct: 31 ENCRVW---DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYL 87
Query: 81 KLSEKLSSLTQYKLGH-CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGE 139
+L EK++ + G+ AVE A+K++ G I +YHG
Sbjct: 88 ELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGV------IAFTGAYHGR 141
Query: 140 TLGALAVT---------------NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA 184
T LA+T ++ ++ +Y L+ +++ ++ I
Sbjct: 142 THYTLALTGKVNPYSAGMGLMPGHV--YRALYPCPLH-----------GVSEDDAIASIE 188
Query: 185 RCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIA 241
R IF KN IAAIIIEP VQ GG +++ +R +C+ + I LIA
Sbjct: 189 R--IF-------KNDAAPEDIAAIIIEP-VQGEGGFYAASPAFMQRLRALCDEHGIMLIA 238
Query: 242 DEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINI 301
DE+ G GRTG FA E + D +K I GG+ PL+ V ++ ++I
Sbjct: 239 DEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAIAPGG---- 293
Query: 302 FLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL-ITHPKIINFRQK 360
+Y+GNP+AC AALA L++F ++N+LQ+ + +K+ L ++ HP+I + R
Sbjct: 294 --LGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL 351
Query: 361 GMIWAFDVIIEDPEQIE---TFSKKFFVAALKNELLLR---PIGNTVYLMPPYILNKNEI 414
G + A + + ED + + + + A L+L P N + ++ P + +I
Sbjct: 352 GAMIAIE-LFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQI 410
Query: 415 QHMTSAIFQTFNEV 428
+ I Q F+E
Sbjct: 411 RQGLEIIAQCFDEA 424
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 147 bits (373), Expect = 2e-40
Identities = 109/397 (27%), Positives = 185/397 (46%), Gaps = 57/397 (14%)
Query: 26 WSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI-KLSE 84
+ D +GK YLD S V GH + + KA++ QL+ + HV SNL + +++
Sbjct: 21 TKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV--SNLFTNSLQEEVAS 78
Query: 85 KLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL 144
L+ + L F+ + GA A E ALK++ + G K K + + S+HG T G +
Sbjct: 79 LLAENSAGDL--VFFCNSGAEANEAALKLARKH---TG---KSKIVTFEQSFHGRTFGTM 130
Query: 145 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAA 204
+ T + KE + LL P N D++ L + + ++AA
Sbjct: 131 SATGQEKIKEGFGPLLPG--FTHVP----FN--------------DIKALKEVMNEEVAA 170
Query: 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264
+++E VQ GG+I D +L+ V+ +C + LI DE+ G GRTG FA E + P
Sbjct: 171 VMLEV-VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDP 229
Query: 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIF---LHSHSYSGNPLACCAALAT 321
D + ++KG+ G +P+ + I K F H ++ GNPLA AA
Sbjct: 230 DIVTVAKGLGNG-IPVGAM---------IGKKELGTAFGPGSHGSTFGGNPLAMAAAKEV 279
Query: 322 LEIFNKDNILQRISQDMKKITKALTSLITH-PKIINFRQKGMIWAFDVIIEDPEQIETFS 380
L++ + + L+ + + + + L + H + N R KG++ + IE E++
Sbjct: 280 LQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLM----IGIECTEEVAP-- 333
Query: 381 KKFFVAALKNE-LLLRPIG-NTVYLMPPYILNKNEIQ 415
+ L+ E LL+ G N + L+PP ++ K E+
Sbjct: 334 ---VIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELD 367
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 146 bits (370), Expect = 2e-39
Identities = 122/451 (27%), Positives = 200/451 (44%), Gaps = 101/451 (22%)
Query: 21 KNSWKWSLIDVSGKRYLD----AISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH 76
K SW L D GK Y+D A + +N +GH+N + +AL ++++ +TH
Sbjct: 29 KGSW---LYDEDGKEYIDFFAGAGA---LN-YGHNNPVLKQAL------IDYLQRDGITH 75
Query: 77 --------KPVIKLSEKLSSLTQ---------YKLGHCFYGSDGASAVEVALKMSFHYWY 119
K E L + + YK+ F G G +AVE ALK++
Sbjct: 76 GLDMHTTAK-----REFLETFEETILKPRGLDYKVQ--FTGPTGTNAVEAALKLARKV-- 126
Query: 120 NKGFLNKKKFICLQNSYHGETLGALAVTNIQSF-KEIYTSLLNKT------YIITTPDSR 172
G + + N +HG TLG+LAVT + L N T Y
Sbjct: 127 -TG---RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYF------- 175
Query: 173 NINKGNSANEIARCAIFDLEILLKKNH---NKIAAIIIEPLVQCAGGMIMYDSIYLKLVR 229
G + +A LE LL+ + + AA+I+E VQ GG+ + + +L+ +
Sbjct: 176 ----GGDVDTLA-----YLEKLLEDSSSGVDLPAAVIVET-VQGEGGINVASAEWLQRLA 225
Query: 230 EICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGY-LPLSLVMTTDK 288
++C ++I LI D+I GCGRTG FF+ E A I PD + LSK I GY LP++LV+
Sbjct: 226 KLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSI-SGYGLPMALVL---- 280
Query: 289 IYNSIYYKNNINIFL---HSHSYSGNPLACCAALATLEIFNKDNILQR-ISQDMKKITKA 344
K ++++ H+ ++ GN LA A A LE + D+ ++ + + + +
Sbjct: 281 ------IKPELDVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRER 334
Query: 345 LTSLI-THPK-IINFRQKGMIWAFDVIIEDPEQIETFSKKFFVAALKNELLLR---PIGN 399
L + +P R +GM+ D D E + K A +N L++ P
Sbjct: 335 LEEIAAKYPGLGAEVRGRGMMQGIDF--GDGE----LAGKIAAEAFENGLIIETSGPEDE 388
Query: 400 TVYLMPPYILNKNEIQHMTSAIFQTFNEVIT 430
V L+PP +++ E++ + + EV+
Sbjct: 389 VVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 148 bits (376), Expect = 9e-39
Identities = 107/449 (23%), Positives = 187/449 (41%), Gaps = 97/449 (21%)
Query: 37 LDAISSWWVNLFGHSNSYINKALKNQL--------NKLEHVMLSNLTHKPVIKLSEKLSS 88
DA +SWW + L+ +L + HVM H+P ++ +E L
Sbjct: 368 FDACASWWT-------QGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELL-- 418
Query: 89 LTQYKLG--------HCFYGSDGASAVEVALKMSFH-YWYNKGFLNKK------------ 127
LG F+ +G++A+EVALKM+F + + GFL
Sbjct: 419 -----LGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIEL 473
Query: 128 KFICLQNSYHGETLGALAVTNIQSFKEIYTSLL--------------------NKTYIIT 167
K + L SYHG+TLGA+ Q+ ++T L N + I+
Sbjct: 474 KVLALDGSYHGDTLGAM---EAQA-PSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNIS 529
Query: 168 TPDSRN-INKGNSANEIARCAIFDLEILLKKNHN--------------------KIAAII 206
P+ + +G +R +FD IAA+I
Sbjct: 530 LPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALI 589
Query: 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266
IEP++ AGGM++ D ++ + + ++C + I +I DE+ G R G A E PD
Sbjct: 590 IEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDI 649
Query: 267 LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326
C +K +TGG +PL+ + T++++ + + ++ LH HSY+ +P+ C AA L+ +
Sbjct: 650 ACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK 709
Query: 327 KDNILQRISQDMKKI-----TKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ-IETFS 380
+ + ++ + + ++ + P + G + A ++ E +
Sbjct: 710 DPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLY 769
Query: 381 KKFFVAALKNE--LLLRPIGNTVYLM-PP 406
+ V L+ E + RP+GN VYLM P
Sbjct: 770 ARSVVRRLRREDGIYARPLGNVVYLMCGP 798
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 144 bits (365), Expect = 2e-38
Identities = 110/422 (26%), Positives = 195/422 (46%), Gaps = 35/422 (8%)
Query: 30 DVSGKRYLDAISSWW-VNLFGHSNSYINKALKNQLNKLE--HVMLSNLTHKPVIKLSEKL 86
D G+RY+DA + + VN+ G+ + + +A+ Q +L H + + T + I LS+++
Sbjct: 46 DAQGRRYIDAFAGLYCVNV-GYGRTEVAEAIAEQAKELAYYHTYVGHGT-EASITLSKRI 103
Query: 87 SSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAV 146
+ +YG G+ A E +K+ ++Y G KKK I YHG + ++
Sbjct: 104 IDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSL 163
Query: 147 TNIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANE-IARCAIFDLEILLKKNHNKIAA 204
T + F + + + + P R + G S + A CA E++L + + IAA
Sbjct: 164 TGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAA 223
Query: 205 IIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264
I EP V GG++ + Y ++ + Y+I LIADE+ G GR G F +H I P
Sbjct: 224 FIAEP-VLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEP 282
Query: 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYY-KNNINIFLHSHSYSGNPLACCAALATLE 323
D + ++KG+T Y PLS + +K+++ + + H +YSG+P+ AALA L+
Sbjct: 283 DLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD 342
Query: 324 IFNKDNILQRISQD----MKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQIETF 379
I ++N++ ++ ++ A HP + R GM+ A + + D +
Sbjct: 343 ILERENLVGNAAEVGAYFRARLRAAFGD---HPLVGEVRGVGMLAAVE-FVADRD----- 393
Query: 380 SKKFFVAALK-----------NELLLR--PIGNTVYLMPPYILNKNEIQHMTSAIFQTFN 426
+ F ALK ++ R P G+ + PP +L + E + + +
Sbjct: 394 DRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD 453
Query: 427 EV 428
EV
Sbjct: 454 EV 455
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 142 bits (359), Expect = 3e-38
Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 21 KNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT----- 75
K SW L D +GKRYLD I W VN GH N + +AL Q KL +
Sbjct: 26 KGSW---LYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKL-------INPSPAF 75
Query: 76 -HKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK---KFIC 131
++P+ KL+ L+ + + F+ + GA A E A+K++ + G +K + I
Sbjct: 76 YNEPMAKLAGLLTQHSCFD--KVFFANSGAEANEGAIKLARKW----GRKHKNGAYEIIT 129
Query: 132 LQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA---RCAI 188
+S+HG TL ++ + + I+ A ++ + +
Sbjct: 130 FDHSFHGRTLATMSASGKPGWDTIF-----------------------APQVPGFPKAEL 166
Query: 189 FDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
D+ + K +K A+++EP VQ GG+I +++ +R + + + LI DE+ GC
Sbjct: 167 NDIASVEKLITDKTVAVMLEP-VQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGC 225
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH-- 306
GRTG FA E + I PD + L KGI GG +PL+ ++ + + +F
Sbjct: 226 GRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAE----------VAVFEAGDQG 274
Query: 307 -SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWA 365
+Y+GNPL +A + L+ + + + + L L + R +G++ A
Sbjct: 275 GTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGLEGERGEGLLRA 334
Query: 366 FDVIIEDPEQIETFSKKFFVAALKNELLLRPIGNTVYLMPPYILNKNEIQHM 417
+ + QI ++ L LL P N + MP + EI M
Sbjct: 335 LLLGKDIGPQIVEKARDMQPDGL---LLNAPRPNLLRFMPALNVTTEEIDQM 383
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 141 bits (357), Expect = 7e-38
Identities = 117/401 (29%), Positives = 186/401 (46%), Gaps = 68/401 (16%)
Query: 30 DVSGKRYLDAISSW-WVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI-KLSEKLS 87
D G RY+D +S++ VN GH + I +ALK+Q +K+ + S H + EK++
Sbjct: 36 DPEGNRYMDMLSAYSAVNQ-GHRHPKIIQALKDQADKV--TLTSRAFHSDQLGPWYEKVA 92
Query: 88 SLTQYKLGHCFYGSD-------GASAVEVALKMSFHYWYN-KGFL-NKKKFICLQNSYHG 138
LT G D GA AVE A+K + + Y+ KG NK + I + ++HG
Sbjct: 93 KLT---------GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHG 143
Query: 139 ETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKN 198
T+ A+++++ + +K + +L P + I G DLE L
Sbjct: 144 RTMAAVSLSSEEEYKRGFGPML--------PGIKKIPYG------------DLEALKAAI 183
Query: 199 HNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACE 258
AA ++EP +Q G+ + +LK RE+C N+ IADEI G GRTGK FAC+
Sbjct: 184 TPNTAAFLVEP-IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACD 242
Query: 259 HAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFL---HSHSYSGNPLAC 315
+ PD L K + GG P+S V I + +F H ++ GNPLAC
Sbjct: 243 WDNVTPDMYILGKALGGGVFPISCVAANRDI---------LGVFTPGSHGSTFGGNPLAC 293
Query: 316 CAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDVIIEDPEQ 375
++A LE+ ++ + +R S ++ + K I +P I R +G+ ++
Sbjct: 294 AVSIAALEVLEEEKLPER-SLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVEL------- 345
Query: 376 IETFSKKFFVAALKNE-LLLRPIGNTVY-LMPPYILNKNEI 414
+ + ALK E LL + TV PP ++ K E+
Sbjct: 346 --NEPARPYCEALKEEGLLCKETHETVIRFAPPLVITKEEL 384
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 142 bits (359), Expect = 8e-38
Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 34/415 (8%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L DV GK Y+D ++S GH+ + +A+K Q +K H + + H+P+++L++KL
Sbjct: 36 LTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLC 95
Query: 88 SLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 145
L ++ F G G+ A + +K + + + + I N+YHG T G+L+
Sbjct: 96 ELAPGDFEKRVTF-GLSGSDANDGIIKFA------RAYTGRPYIISFTNAYHGSTYGSLS 148
Query: 146 VTNIQ-SFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIAR-CAIFDLEILLKKNHNKI 202
++ I + + Y LL I PD R + + AN + A +++
Sbjct: 149 MSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEV 208
Query: 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262
A I+IE +Q GG++ Y + + + C + I D+I G GRTGK+ + H I
Sbjct: 209 ACIVIET-IQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI 267
Query: 263 WPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATL 322
PD + K + GG +P+S ++ +I S+ ++ + NP++C AALAT+
Sbjct: 268 TPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEAPAHL------FTTGANPVSCAAALATI 320
Query: 323 EIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFDVIIEDPEQIETFSK 381
++ +++LQR ++ + K ++ + + + R G+ D I+ D + ++
Sbjct: 321 DMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGID-IVSDKKLKTRDNE 379
Query: 382 KFFVAALK--------NELLLRPIGNTVYLMPPYILNKNEIQHMTSAIFQTFNEV 428
AALK +++ GN + PP ++ ++ + I Q F +
Sbjct: 380 ----AALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTAL 430
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 141 bits (356), Expect = 1e-37
Identities = 91/321 (28%), Positives = 155/321 (48%), Gaps = 31/321 (9%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L D GK Y+D VN GH++ + +AL Q +K H + T++PV++L++KL
Sbjct: 33 LWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTG-NGYTNEPVLRLAKKLI 91
Query: 88 SLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVT 147
T F+ + GA A E ALK++ Y +++ +K + +N++HG TL ++
Sbjct: 92 DATFAD--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAG 149
Query: 148 NIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIII 207
+ + + L +I A DL ++ A+I+
Sbjct: 150 GQPKYSQDFAPL--------------------PPDIRHAAYNDLNSASALIDDQTCAVIV 189
Query: 208 EPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFL 267
EP +Q GG+I D +L+ +RE+C+ +N LI DE+ G GRTG+ +A H + PD L
Sbjct: 190 EP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL 248
Query: 268 CLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNK 327
+K + GG+ P+ ++TT+K + + + H +Y GNPLA A LE+ N
Sbjct: 249 TTAKALGGGF-PIGAMLTTEK------CASVMTVGTHGTTYGGNPLASAVAGKVLELINT 301
Query: 328 DNILQRISQDMKKITKALTSL 348
+L + Q + L ++
Sbjct: 302 PEMLNGVKQRHDWFVERLNTI 322
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 141 bits (357), Expect = 2e-37
Identities = 114/418 (27%), Positives = 201/418 (48%), Gaps = 34/418 (8%)
Query: 28 LIDVSGKRYLD---AISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSE 84
+ DV G +Y+D AI + V GHS+ + +AL Q+++ H + + ++P I+L+E
Sbjct: 48 VTDVDGNQYIDFAGAIGTINV---GHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAE 104
Query: 85 KLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLG 142
KL++L + F S GA AVE A+K++ Y +G I +HG TL
Sbjct: 105 KLAALAPGSFDKKVLFLNS-GAEAVENAVKIARKYTKRQGI------ISFSRGFHGRTLM 157
Query: 143 ALAVTN-IQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI--FDLEILLKKNH 199
+ +T+ ++ +K + + Y P +G + + I F + +
Sbjct: 158 TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAP 217
Query: 200 NKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEH 259
IAA+++EP VQ GG I+ +++ VR IC+ + I +ADEI G RTGK+FA EH
Sbjct: 218 ETIAAVVMEP-VQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEH 276
Query: 260 AEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAAL 319
++ PD + +SK + G +P+S V+ +I + +Y+G+PL C AAL
Sbjct: 277 FDVVPDLITVSKSLGAG-VPISGVIGRKEIMDE------SAPGELGGTYAGSPLGCAAAL 329
Query: 320 ATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWAFDVIIEDPEQIE- 377
A L+I K+N+ R + K + + + I + R G + AF+ +++D + E
Sbjct: 330 AVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFE-LVQDRKTKEP 388
Query: 378 --TFSKKFFVAALKNELLLRPI---GNTVYLMPPYILNKNEIQHMTSAIFQTFNEVIT 430
T + A K LLL GN + ++ P ++ +++ + I ++
Sbjct: 389 DKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 136 bits (344), Expect = 3e-36
Identities = 100/393 (25%), Positives = 170/393 (43%), Gaps = 55/393 (13%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
LID GK+YLD S V G + + +AL+ Q + H P + L+
Sbjct: 23 LIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAG--------LIWHSPNLYLNSLQE 73
Query: 88 SLTQYKLGH----CFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA 143
+ Q +G F+ + GA A E A+K++ + K++ I QNS+HG T G+
Sbjct: 74 EVAQKLIGDKDYLAFFCNSGAEANEAAIKIA------RKATGKQEIITFQNSFHGRTFGS 127
Query: 144 LAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIA 203
++ T K+ + G+ + DL + + A
Sbjct: 128 MSATGQDKIKDGF--------------------GDGVPHFSYAIFNDLNSVKALVNKNTA 167
Query: 204 AIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW 263
A+++E LVQ G++ D ++K + + C I LI DE+ G GRTGK +A EH I
Sbjct: 168 AVMLE-LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIE 226
Query: 264 PDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLE 323
PD L+KG+ G +P+ ++ + + Y + H ++ GN L+ AA ATL+
Sbjct: 227 PDIFTLAKGLANG-VPVGAMLAKSSLGGAFGYGS------HGSTFGGNKLSMAAASATLD 279
Query: 324 IFNKDNILQRISQDMKKITKALT-SLITHPKIINFRQKGMIWAFDVIIEDPEQIETFSKK 382
I L++ ++ + + L +L + R G + + D Q+ ++
Sbjct: 280 IMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIET-TADLSQLVEAARD 338
Query: 383 FFVAALKNELLLRPIGNTVYLMPPYILNKNEIQ 415
K ++L N + L+PP L K EI+
Sbjct: 339 ------KGLIVLTAGTNVIRLLPPLTLTKEEIE 365
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 137 bits (347), Expect = 5e-36
Identities = 122/425 (28%), Positives = 191/425 (44%), Gaps = 48/425 (11%)
Query: 15 LVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNL 74
L I + W + DV G +YLD ++ GH++ + +++++ L + +L
Sbjct: 42 LAIAKAQGVW---VTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDL 98
Query: 75 THKPVIKLSEKLSSL-----TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKF 129
T SE L SL +Y L G GA AVE A+K++ K + +
Sbjct: 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFT--GPSGADAVEAAIKLA------KTYTGRSNV 150
Query: 130 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRN--INKGNSANEIARCA 187
I YHG T GALAVT S K L+ + P + G A A
Sbjct: 151 ISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY 210
Query: 188 IFDLEIL-LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAV 246
F+ I ++ K AA+I+E +Q GG+ +L+ +RE+ + I LI DE+
Sbjct: 211 YFENFIEDVESGVRKPAAVILEA-IQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQA 269
Query: 247 GCGRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH 306
G RTGK FA EHA I PD + +SK + GG LPL+ V+ K +++ H+
Sbjct: 270 GFARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLA-VLGIKKEFDAWQPGG------HTG 321
Query: 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKIINFRQKGMIWA 365
++ GN LA L TL+I ++N+ Q ++ + + L L +P I N R +G++
Sbjct: 322 TFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIG 381
Query: 366 FDVIIE------------DPEQIETFSKKFFVAALKNELLLRP---IGNTVYLMPPYILN 410
+++ E D E K F +N LLL GN V L+PP ++
Sbjct: 382 IEIVDERQPADAMGSYPADGELAAAIQKACF----ENGLLLERGGRNGNVVRLLPPLLIT 437
Query: 411 KNEIQ 415
+ E +
Sbjct: 438 QAECE 442
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 136 bits (343), Expect = 1e-35
Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 37/396 (9%)
Query: 22 NSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIK 81
N+ W D G+RY+D + V GH + + A+K QL++ H + ++ ++
Sbjct: 31 NAEIW---DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVR 87
Query: 82 LSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGE 139
L+E+L++L + F + GA AVE A+K++ + I +HG
Sbjct: 88 LAERLNALVPGDFAKKTIFV-TTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGR 140
Query: 140 TLGALAVT-NIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIFDLEILLKK 197
T +++T + +K + +++ Y + P + ++ S + + D++
Sbjct: 141 TFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD----- 195
Query: 198 NHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFAC 257
++AAIIIEP VQ GG + ++K +RE+C+ + I LIADE+ G RTGK FA
Sbjct: 196 -PQRVAAIIIEP-VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAM 253
Query: 258 EHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCA 317
EH E+ D ++KG+ GG PL+ V +I ++ +Y GNPL A
Sbjct: 254 EHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGPGG------LGGTYGGNPLGIAA 306
Query: 318 ALATLEIFNKDNILQRISQDMKKITKALTSLITH-PKIINFRQKGMIWAFDVIIEDPEQI 376
A A L++ ++++ +R +Q ++ + L SL P+I + R G + A V D +
Sbjct: 307 AHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNA--VEFNDADSG 364
Query: 377 E---TFSKKFFVAALKNELLLRPI---GNTVYLMPP 406
F+ + + AL+ L+L GN + + P
Sbjct: 365 LPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAP 400
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 135 bits (343), Expect = 1e-35
Identities = 111/407 (27%), Positives = 185/407 (45%), Gaps = 63/407 (15%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
+ DV G R +D S V G+S + +A++ Q+ + H ++ + ++E+L+
Sbjct: 50 VEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLN 109
Query: 88 SLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 145
LT ++ + S GA AVE A+K++ Y ++ + ++YHG T +A
Sbjct: 110 RLTPGDHEKRSALFNS-GAEAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMA 162
Query: 146 VTNIQS-FK--------EIYTSLLNKTYIITTPDSRNINKGNSANEIARCAI--FDLEIL 194
+T +K E+Y + ++ Y E A AI + ++
Sbjct: 163 LTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGL------ATDGEEAAARAITVIEKQV- 215
Query: 195 LKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKF 254
+ +AA+IIEP +Q GG I+ +L + E C + IADE+ G RTG +
Sbjct: 216 ---GADNLAAVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAW 271
Query: 255 FACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSH------SY 308
FACEH I PD + +KGI GG LPLS V +I ++ H +Y
Sbjct: 272 FACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAP------------HPGGLGGTY 318
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-THPKIINFRQKGMIWAFD 367
GNP+AC AALA +E +D+++ R Q +T L +L +I + R +G + A +
Sbjct: 319 GGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378
Query: 368 VIIE-----DPEQIETFSKKFFVAALKNELLLRPIG---NTVYLMPP 406
++ D E +K AA +++ G N + L+PP
Sbjct: 379 LVKPGTTEPDAE----LTKALAAAAHAAGVIVLTCGTYGNVIRLLPP 421
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 134 bits (339), Expect = 2e-35
Identities = 111/408 (27%), Positives = 176/408 (43%), Gaps = 70/408 (17%)
Query: 24 WKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLT-----HKP 78
W W D G RYLD +S++ GH + I A+ Q +L LT +
Sbjct: 34 WVW---DTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRL------TLTSRAFRNDQ 84
Query: 79 VIKLSEKLSSLTQYKLGHCFYGS-------DGASAVEVALKMSFHYWYN-KGFL-NKKKF 129
+ L E+L++LT GS GA AVE A+K + Y KG + +
Sbjct: 85 LAPLYEELAALT---------GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEI 135
Query: 130 ICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIF 189
I +++HG TL I F T PD+R G R F
Sbjct: 136 IVCADNFHGRTLS------IVGFS-------------TDPDARG-GFGPFTPGF-RVVPF 174
Query: 190 -DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
D E L A ++EP +Q G+I+ + Y VRE+C N+ LI DEI G
Sbjct: 175 GDAEALEAAITPNTVAFLVEP-IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGL 233
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY 308
GRTGK A EH I D + K ++GG+ P+S V++ ++ + H ++
Sbjct: 234 GRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQ------HGSTF 287
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKIINFRQKGMIWAFDV 368
GNPLAC A A L++ ++ +++ ++ + L S I + R +G++ A ++
Sbjct: 288 GGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRS-IRSNIVREVRGRGLMLAVEL 346
Query: 369 IIEDPEQIETFSKKFFVAALKNELLL--RPIGNTVYLMPPYILNKNEI 414
+ E + + ALK LL +T+ L PP ++ + ++
Sbjct: 347 ------EPEAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQV 388
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 133 bits (335), Expect = 1e-34
Identities = 101/389 (25%), Positives = 188/389 (48%), Gaps = 49/389 (12%)
Query: 27 SLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKL 86
+L DV G+ Y+D + V GH + + A++ QL++ H + + + L+E++
Sbjct: 33 TLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERI 92
Query: 87 SSLTQYKLGHC---FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA 143
++L G F+ + GA AVE A+K++ Y G I ++HG TL
Sbjct: 93 NALAPID-GPAKTAFF-TTGAEAVENAVKIARAYTGRPGV------IAFGGAFHGRTLLT 144
Query: 144 LAVT-NIQSFK--------EIYTSLL-NKTYIITTPDSRNINKGNSANEIARCAIFDLEI 193
+A+T + +K I+ +L N+ + ++ ++ + S + + I
Sbjct: 145 MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALS-----SVERLFKADI----- 194
Query: 194 LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253
+++AAI++EP +Q GG + ++ +R +C+ + I LIADE+ G RTGK
Sbjct: 195 ----APDQVAAILLEP-IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK 249
Query: 254 FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPL 313
FA E+ ++ PD + ++K + GG P+S V+ ++ ++ +Y+GNPL
Sbjct: 250 LFAMEYYDVKPDLITMAKSLGGGM-PISAVVGRAEVMDAPAPGG------LGGTYAGNPL 302
Query: 314 ACCAALATLEIFNKDNILQRISQDMKKITKALTSLITH-PKIINFRQKGMIWAFDVIIED 372
A AALA L++ ++ + QR + + L P I++ R +G + A V D
Sbjct: 303 AVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVA--VEFND 360
Query: 373 PEQIE---TFSKKFFVAALKNELLLRPIG 398
P+ + F++++ AL+ LLL G
Sbjct: 361 PQTGKPSPEFTRQYQRQALEEGLLLLSCG 389
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 133 bits (335), Expect = 1e-34
Identities = 112/404 (27%), Positives = 186/404 (46%), Gaps = 37/404 (9%)
Query: 14 NLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN 73
N +S +N+ +L DV G Y+D + V GH + + A++ QL + H
Sbjct: 23 NFFAQSAENA---TLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQI 79
Query: 74 LTHKPVIKLSEKLSSLT--QYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFIC 131
+ ++ + L+EK+++L + F+ + GA AVE A+K++ + + I
Sbjct: 80 VPYESYVTLAEKINALAPVSGQAKTAFF-TTGAEAVENAVKIA------RAHTGRPGVIA 132
Query: 132 LQNSYHGETLGALAVT-NIQSFKEIYTSLLNKTYIITTP-DSRNINKGNSANEIARCAIF 189
+HG T +A+T + +K + Y + P D I+ +S + I R
Sbjct: 133 FSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKS 192
Query: 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCG 249
D+E ++AAII EP VQ GG + + +R +C+ + I +IADE+ G
Sbjct: 193 DIEA------KQVAAIIFEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245
Query: 250 RTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYS 309
RTGK FA +H PD + ++K + GG +PLS V+ I ++ +Y+
Sbjct: 246 RTGKLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAPGG------LGGTYA 298
Query: 310 GNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLI-THPKIINFRQKG-MIWA-- 365
GNPLA AA A L I +K+++ +R +Q +++ L + P I R G MI A
Sbjct: 299 GNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEF 358
Query: 366 FDVIIEDPEQIETFSKKFFVAALKNELLLR---PIGNTVYLMPP 406
D +P ++K AL LLL GN + + P
Sbjct: 359 NDPQTGEPSAA--IAQKIQQRALAQGLLLLTCGAYGNVIRFLYP 400
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 125 bits (314), Expect = 2e-31
Identities = 105/399 (26%), Positives = 199/399 (49%), Gaps = 37/399 (9%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSSL 89
DV G ++D ++ G+S+ + KA++ Q+ ++H M+ + I+++EKL+ +
Sbjct: 49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEI 108
Query: 90 TQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI-CLQNSYHGETLGALAVTN 148
+ + +G G+ AV++A+K+S F ++ +I +YHG+TLGA +V
Sbjct: 109 SPIENPKVLFGLSGSDAVDMAIKVS-------KFSTRRPWILAFIGAYHGQTLGATSVAA 161
Query: 149 IQ-SFKEIYTSLLNKTYIITTPDS-RN---INKGNSANEIARCAIFDLEILLKKN---HN 200
Q S K ++ L+ I P+ RN IN +E+ + LE + + +
Sbjct: 162 FQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPD 221
Query: 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHA 260
++AA+ EP +Q G+++ + K ++++ + + I L+ DE+ G GRTGK+FA E
Sbjct: 222 EVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWF 280
Query: 261 EIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSY----SGNPLACC 316
E+ PD + KG+ G + LS V+ ++ + L S S + NP+
Sbjct: 281 EVKPDLIIFGKGVASG-MGLSGVIGRKELMD-----------LTSGSALLTPAANPVISA 328
Query: 317 AALATLEIFNKDNILQRISQDMKKITKALTSLITHPKII-NFRQKGMIWAFDVIIEDPEQ 375
AA ATLEI ++N+L+ + + I K L + ++I + R KG++ +++ E+ +
Sbjct: 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKP 388
Query: 376 IETFSKKFFVAALKNELLLRP---IGNTVYLMPPYILNK 411
+ K A + L+L GN + + PP ++ K
Sbjct: 389 DPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITK 427
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 122 bits (308), Expect = 4e-31
Identities = 86/322 (26%), Positives = 150/322 (46%), Gaps = 34/322 (10%)
Query: 30 DVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTH-KPVIKLSEKLSS 88
D G+ YLD + V GH++ + AL Q KL H SN+ + P +KL+E+L +
Sbjct: 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHT--SNVFYSAPPLKLAEELVT 93
Query: 89 LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFI-CLQNSYHGETLGALAVT 147
+++ F + G A E A+K+ + ++G K+ I + S+HG TL A+ T
Sbjct: 94 ASRFA-EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTAT 152
Query: 148 NIQSFKEIYTSLLNKTYIITTPDS-RNINKGNSANEIARCAIFDLEILLKKNHNKIAAII 206
++E Y L P R ++ N++ LE + +AA++
Sbjct: 153 AQPKYQEGYEPL---------PGGFRYVD----FNDVEA-----LEAAMAG--GDVAAVM 192
Query: 207 IEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDF 266
+EP +Q GG++ +L VR +C+ ++ L+ DEI G GRTG FA ++ PD
Sbjct: 193 LEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDI 251
Query: 267 LCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFN 326
+ L+K + GG+ P+ ++ K+ ++ + H ++ GNPLA A L
Sbjct: 252 VTLAKALGGGF-PIGAMLAGPKVAETMQFG------AHGTTFGGNPLAAAVARVALRKLA 304
Query: 327 KDNILQRISQDMKKITKALTSL 348
I +++ + L +L
Sbjct: 305 SPQIAANVARQSAALRAGLEAL 326
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 119 bits (300), Expect = 2e-29
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 27/284 (9%)
Query: 98 FYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYT 157
F G G AVE ALK+ K + + Q YHG + GAL++ K+
Sbjct: 131 FCGPTGTDAVEAALKLV------KTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLG 184
Query: 158 SLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKI---AAIIIEPLVQCA 214
+LL + P G R + LE LL + + AA+I+E +VQ
Sbjct: 185 ALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILE-VVQGE 243
Query: 215 GGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGIT 274
GG+I +L+ +R I I LI DEI G GRTGK FA EHA I PD + LSK I
Sbjct: 244 GGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAI- 302
Query: 275 GGYLPLSLVMTTDKIYNSIYYKNNINIFL---HSHSYSGNPLACCAALATLEIFNKDNIL 331
GG LPL++V+ Y+ ++ + H+ ++ GN +A A ATL + +
Sbjct: 303 GGSLPLAVVV----------YREWLDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLA 352
Query: 332 QRISQDMKKITKALTSL-ITHPKIINFRQKGMIWAFDVIIEDPE 374
+ + +++ + L L +P++ + R +G++ +++ DP+
Sbjct: 353 EHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIV--DPQ 394
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 99 bits (250), Expect = 6e-23
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 85/403 (21%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L DV G Y+D + W + GH++ + +A++ QL + + + ++L+E L
Sbjct: 47 LTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG---LSFGAPTELEVELAELLI 103
Query: 88 SLTQ--YKLGHCFYGSDGA--SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA 143
K+ G++ A SA+ +A + + + K I + YHG +
Sbjct: 104 ERVPSIEKVRFVNSGTE-ATMSAIRLA----------RAYTGRDKIIKFEGCYHGHSDSL 152
Query: 144 L-------AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLK 196
L A S + + T + P N++ LE +
Sbjct: 153 LVKAGSGAATLGSPSSPGVPADVAKHT--LVLP----------YNDLE-----ALEEAFE 195
Query: 197 KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFF- 255
+ + IAA+I+EP V G++ + +L+ +RE+ + LI DE+ TG F
Sbjct: 196 EYGDDIAAVIVEP-VAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV-----ITG--FR 247
Query: 256 -----ACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYN------SIYYKNNINIFLH 304
A + + PD L K I GG LP+ +I +Y
Sbjct: 248 VALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAPLGPVY---------Q 297
Query: 305 SHSYSGNPLACCAALATLE-IFNKDNILQRISQDMKKITKALTSLITHPKI---INFRQK 360
+ + SGNPLA A LATLE + ++ + +R+ +++ + L + I +N R
Sbjct: 298 AGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVN-RVG 356
Query: 361 GM--IWAFDVIIEDPEQ-----IETFSKKFFVAALKNELLLRP 396
M I+ + + + +E F KFF L + L P
Sbjct: 357 SMFGIFFTEEGVRNYADAKRSDVERF-AKFFHHLLNRGVYLAP 398
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 100 bits (251), Expect = 1e-22
Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 47/348 (13%)
Query: 24 WKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLS 83
W+ L D++G+ YLD +++ V + GH + + A Q + L S + V + S
Sbjct: 575 WRHHLFDMAGRSYLDMVNN--VTVLGHGHPRLAAAAARQWSLLN--TNSRFHYAAVAEFS 630
Query: 84 EKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGA 143
E+L++L L F + G+ A ++A++++ W G ++ + + +YHG T+
Sbjct: 631 ERLAALAPDGLDTVFLVNSGSEANDLAIRLA---WAASG---RRDVVSVLEAYHGWTVAT 684
Query: 144 LAV-TNIQSFKEIYTSLLNKTYIITTPDS-RNINKG-NSANEIARCAIFDLEILLKKNHN 200
AV T+I + + + + + +P++ R +G +SA + R + LE L
Sbjct: 685 DAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASG-R 743
Query: 201 KIAAIIIEPLVQCAGGMIMYDSIYLK----LVRE---ICNNYNIHLIADEIAVGCGRTGK 253
+A I EP+ AGG+ + YL+ VR +C IADE+ VG GR G
Sbjct: 744 GLAGFICEPVYGNAGGIALPPG-YLQQVYAAVRARGGVC-------IADEVQVGYGRLGH 795
Query: 254 FF-ACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSI----YYKNNINIFLHSHSY 308
+F E + PD + ++KG+ G+ PL V+T +I ++ Y+ F S
Sbjct: 796 YFWGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEALEAEGYF------F---SST 845
Query: 309 SGNPLACCAALATLEIFNKDNILQRISQDMKKITKA-LTSLIT-HPKI 354
G+P++C +A L++ ++ LQ ++ + KA L +L HP I
Sbjct: 846 GGSPVSCRIGMAVLDVL-REEKLQENARRVGDHLKARLEALADRHPLI 892
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 100 bits (251), Expect = 1e-22
Identities = 84/337 (24%), Positives = 145/337 (43%), Gaps = 68/337 (20%)
Query: 24 WKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSN--LTHKPVIK 81
W LID G+ YLD ++ V GH++ + A Q +L +N H ++
Sbjct: 614 WGVWLIDNRGRAYLDCFNN--VCHVGHAHPRVVAAAARQAARLN----TNTRYLHDAIVA 667
Query: 82 LSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETL 141
+E+L++ L F+ + G+ A +AL+++ + + I L ++YHG T
Sbjct: 668 YAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDA------IVLDHAYHGTTT 721
Query: 142 GALAVTNIQSFKEIYTSLLNK---------TYIITTPDSRNINKGNS--------ANEIA 184
+ + +K N+ + PDS + A +A
Sbjct: 722 ELID---LSPYK------FNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVA 772
Query: 185 RCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLK----LVRE---ICNNYNI 237
I + K A I E + AG + + + YL+ +VR +C
Sbjct: 773 E-QI---AAMAAKGR-GPAFFIAESIPSVAGQIFLPEG-YLREVYAMVRAAGGVC----- 821
Query: 238 HLIADEIAVGCGRTGK-FFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK 296
IADE+ VG GR G ++A E + PD + + K I G+ P+ V+TT +I +S +
Sbjct: 822 --IADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIADS--FD 876
Query: 297 NNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQR 333
N + F +++ GNP++C LA L+I ++ LQR
Sbjct: 877 NGMEYF---NTFGGNPVSCAIGLAVLDIIEDED-LQR 909
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 92.0 bits (229), Expect = 2e-20
Identities = 94/406 (23%), Positives = 159/406 (39%), Gaps = 92/406 (22%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLS 87
L DV G Y+D + SW + GH++ + +A+K L E + I L++++
Sbjct: 42 LYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEAL---ERGTSYGAPTEAEILLAKEII 98
Query: 88 SL--TQYKLGHCFYGSDGA-SAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGAL 144
S + + G++ SAV +A +G+ + K I + YHG
Sbjct: 99 SRVPSVEMVRFVNSGTEATMSAVRLA----------RGYTGRDKIIKFEGCYHGH----- 143
Query: 145 AVTNIQSFKEIYTSLLNK------TYIITTPDSRNINKGNSANEIARCAIFDLEIL---L 195
+ +LL K T + P S + + + + DLE L
Sbjct: 144 -----------HDALLVKAGSGAATLGL--PTSPGVPEDFAKLTLV-LPYNDLEALEEVF 189
Query: 196 KKNHNKIAAIIIEPLVQCAGGM--IMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGK 253
++ +IA +I+EP+ AG M + +L +R + Y LI DE+ G R
Sbjct: 190 EEYGEEIAGVIVEPV---AGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVAL 245
Query: 254 FFACEHAEIWPDFLCLSKGITGGYLP----------LSLVMTTDKIYNSIYYKNNINIFL 303
A E+ + PD L K I GG LP + + +Y +
Sbjct: 246 GGAQEYFGVEPDLTTLGK-IIGGGLPVGAFGGRREIMERLAPEGPVYQA----------- 293
Query: 304 HSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLITHPKI---INFRQK 360
+ SGNPLA A LATL++ +++ + + + K++ + L+ ++ I +N R
Sbjct: 294 --GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN-RVG 350
Query: 361 GMIWAFDVIIEDPE----------QIETFSKKFFVAALKNELLLRP 396
M F + + E E F KFF L + L P
Sbjct: 351 SM---FSLFFTEEEVTNYADAKKSDTELF-AKFFHEMLDKGVFLPP 392
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 91.0 bits (226), Expect = 7e-20
Identities = 79/348 (22%), Positives = 143/348 (41%), Gaps = 42/348 (12%)
Query: 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK---------KFICLQNSYHGETLGAL 144
L H F+ GA AVE ALK +F W K N+ + + L+ ++HG + L
Sbjct: 103 LPHLFFIEGGALAVENALKTAFD-W--KSRHNQARGIPAALGTQVLHLRQAFHGRSGYTL 159
Query: 145 AVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIA--RCAIFDLEILLKKNHNKI 202
++TN K + I + ++ N IA A+ + + I
Sbjct: 160 SLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDI 219
Query: 203 AAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEI 262
A I EP +Q GG + +L+ +R +C+ ++ LI DE+ G G TG +A + +
Sbjct: 220 ACFIAEP-IQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV 278
Query: 263 WPDFLCLSK-----GITGGYLPLSLVMTTDKIYNSIY-YKNNINIFLHSHSYSGNPLACC 316
PD + K GI G D++ ++++ + +N ++ GN +
Sbjct: 279 QPDIVAFGKKTQVCGIMAG-------RRVDEVADNVFAVPSRLN-----STWGGNLVDMV 326
Query: 317 AALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKII-NFRQKGMIWAFDVIIEDPE 374
A LEI ++ ++ + L L P ++ N R +G++ AFD +
Sbjct: 327 RATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFD--LPSTA 384
Query: 375 QIETFSKKFFVAALKNELLLRPIGN-TVYLMPPYILNKNEIQHMTSAI 421
+ ++ + + +LL G ++ PP + + EI AI
Sbjct: 385 DRDEVIRQLY----REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAI 428
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 90.8 bits (226), Expect = 7e-20
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 62/358 (17%)
Query: 94 LGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKK------KFICLQNSYHGETLGALAVT 147
L H F+ GA AVE ALK++F + K K + L+ ++HG + L++T
Sbjct: 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLT 169
Query: 148 NIQSFKEIYTSLLNKT-YI-------ITTPDSRNINKGNSANEIA---RCAIFDLEILLK 196
N KT I P R G E+ A+ +
Sbjct: 170 NTDP---------RKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFE 220
Query: 197 KNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFA 256
++ + IA I EP +Q GG + + +RE+C+ ++ LI DE+ G G TG +A
Sbjct: 221 RHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWA 279
Query: 257 CEHAEIWPDFLCLSK-----GITGGYLPLSLVMTTDKIYNSIYYKNNINIF-----LHSH 306
+ + PD + K GI G D++ + N+F ++S
Sbjct: 280 YQQLGVRPDIVAFGKKTQVCGIMAG-------RRVDEVED--------NVFAVSSRINS- 323
Query: 307 SYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT-HPKII-NFRQKGMIW 364
++ GN + A LE+ +D +++ ++ + + L L P ++ N R +G++
Sbjct: 324 TWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMC 383
Query: 365 AFDVIIEDPEQIETFSKKFFVAALKNELLLRPIGN-TVYLMPPYILNKNEIQHMTSAI 421
AFD+ + + +L+ P G ++ P + EI A+
Sbjct: 384 AFDL--PTTAD----RDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDAL 435
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 88.6 bits (220), Expect = 5e-19
Identities = 93/361 (25%), Positives = 149/361 (41%), Gaps = 69/361 (19%)
Query: 7 FKKKSSNNLVIRSLKNSWKWSLIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKL 66
FK +V +K S+ W DV G Y+D + SW + GH++ + AL + K
Sbjct: 75 FKSVGGQPIVFDRVKGSYAW---DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKG 131
Query: 67 EH----VMLSNLTHKPVIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKG 122
+L N+ + VI + S+ + F S G A L+++ +
Sbjct: 132 TSFGAPCLLENVLAEMVID---AVPSVEMVR----FVNS-GTEACMGVLRLA------RA 177
Query: 123 FLNKKKFICLQNSYHGETLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANE 182
+ ++K I + YHG L +++ + T L PDS + K ++
Sbjct: 178 YTGREKIIKFEGCYHGHADSFL----VKAGSGVATLGL--------PDSPGVPKAATSAT 225
Query: 183 IARCAIF-DLEI---LLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIH 238
+ A + DLE L + N +IAA+I+EP+V + G I+ +L+ +REI
Sbjct: 226 L--TAPYNDLEAVKKLFEANKGEIAAVILEPVVGNS-GFIVPKKEFLEGLREITKENGAL 282
Query: 239 LIADEIAVGCGRTGKFFACEHAEIWPDFLCLSKGITGGYLP----------LSLVMTTDK 288
L+ DE+ G R A E+ I PD L K I GG LP + +V
Sbjct: 283 LVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPAGP 340
Query: 289 IYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSL 348
+Y + + SGNPLA A + TL+ + + + KITK L
Sbjct: 341 MY-------------QAGTLSGNPLAMTAGIHTLKRLQQPGTYEY----LDKITKKLIQG 383
Query: 349 I 349
I
Sbjct: 384 I 384
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 87.2 bits (216), Expect = 1e-18
Identities = 91/378 (24%), Positives = 155/378 (41%), Gaps = 70/378 (18%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVI------- 80
L+DV G R LD S G++N + KA ++ M + L ++P +
Sbjct: 52 LVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSP------EMATTLINRPALGNFPSKD 105
Query: 81 ---KLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNK------GFLNKKKFIC 131
L E + + + G G+ A E+A K +F Y+ +K F ++ C
Sbjct: 106 WAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESC 165
Query: 132 LQN---------------SYHGETLGALAVT--------NIQSFKEIYTSLLNKTYIITT 168
+ N ++HG G+L+ T +I +F + Y
Sbjct: 166 MDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKY---- 221
Query: 169 PDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIYLKLV 228
P ++ + +A E RC + ++E L+KK H +AAII+EP +Q GG + + +
Sbjct: 222 PLEEHVKE--NAKEEQRC-LEEVEDLIKKWHKPVAAIIVEP-IQSEGGDNHASPDFFRKL 277
Query: 229 REICNNYNIHLIADEIAVGCGRTGKFFACEHAEIW--PDFLCLSKGI-TGGYLPLSLVMT 285
R+I +N+ I DE+ G G TGKF+A EH + PD + SK T GY
Sbjct: 278 RDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYFFHDPAFR 337
Query: 286 TDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKAL 345
+K Y +++ G+P ++ + ++L+ ++ + L
Sbjct: 338 PNKPYR------------QFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGL 385
Query: 346 TSLIT-HP-KIINFRQKG 361
L +P I N R KG
Sbjct: 386 EDLQKKYPEFIQNLRGKG 403
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 75.1 bits (186), Expect = 1e-14
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 53/238 (22%)
Query: 191 LEILLKKNHNKIAAIIIEPLVQCAG--GMIMYDSIYLKLVREICNNYNIHLIADEIAVGC 248
+E L ++ ++IAA+I+EP AG G++ +L+ +RE+C+ + LI DE V
Sbjct: 187 VEELFEEYGDEIAAVIVEP---VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDE--VMT 241
Query: 249 G-RTGKFFACEHAEIWPDFLCLSKGITGGYLPL----------SLVMTTDKIYNSIYYKN 297
G R A + + PD L K I GG LP+ + +Y
Sbjct: 242 GFRVALGGAQGYYGVTPDLTTLGK-IIGGGLPVGAFGGRREIMEQLAPLGPVYQ------ 294
Query: 298 NINIFLHSHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTSLIT---HPKI 354
+ + SGNPLA A LATL++ + + + K++ + L P
Sbjct: 295 -------AGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLT 347
Query: 355 INFRQKGMIWAF--DVIIEDPEQ-----IETFSKKFFVAALKNELLLRPIGNTVYLMP 405
+N R M F D + + E F +FF A L G VYL P
Sbjct: 348 VN-RVGSMFGLFFTDEPVTNYADAKKSDTERF-ARFFHAMLDE-------G--VYLAP 394
Score = 38.9 bits (92), Expect = 0.004
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNK 65
L DV G Y+D + SW + GH++ + +A+ K
Sbjct: 44 LYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 65.4 bits (160), Expect = 1e-11
Identities = 90/419 (21%), Positives = 159/419 (37%), Gaps = 118/419 (28%)
Query: 28 LIDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQL---------NKLEHVMLSNLTHKP 78
DV G +Y+D ++++ + GH++ +I KA+ +LE + +
Sbjct: 47 FYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELE-IEFAK----- 100
Query: 79 VIKLSEKLSSLTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHG 138
L E + SL + + F S G AV ++++ + + + K I YHG
Sbjct: 101 --MLKEAIPSLEKVR----FVNS-GTEAVMTTIRVA------RAYTGRTKIIKFAGCYHG 147
Query: 139 E-------------TLGALAVTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIAR 185
TLG TPDS + K + A E+
Sbjct: 148 HSDLVLVAAGSGPSTLG-------------------------TPDSAGVPK-SIAQEVIT 181
Query: 186 CAIFDLEIL---LKKNHNKIAAIIIEPLVQCAG--GMIMYDSIYLKLVREICNNYNIHLI 240
D+E L L K +++AA+++EP+V G G++ +L+ V E+ + +I
Sbjct: 182 VPFNDIEALKEALDKWGDEVAAVLVEPIV---GNFGIVEPKPGFLEAVNELAHEAGALVI 238
Query: 241 ADEIAVGCGRTGKFF----ACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIYYK 296
DE+ T F A + + PD L K I GG LP+ Y
Sbjct: 239 YDEVI-----TAFRFMYGGAQDLLGVEPDLTALGK-IIGGGLPIGA------------YG 280
Query: 297 NNINIFLH---------SHSYSGNPLACCAALATLEIFNKDNILQRISQDMKKITKALTS 347
+I + + +GNP + A +A LE+ ++ + +++ + + + +
Sbjct: 281 GRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILE 340
Query: 348 LIT---HPKIINFRQKGMIWAF--DVIIEDPEQI-----ETFSKKFFVAALKNELLLRP 396
IN R KG + + D + + +Q E F KFF L + L P
Sbjct: 341 AAEKHGITITIN-RLKGALTVYFTDEKVTNYDQAERSDGEAFG-KFFKLMLNQGINLAP 397
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 63.3 bits (154), Expect = 8e-11
Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 33/312 (10%)
Query: 29 IDVSGKRYLDAISSWWVNLFGHSNSYINKALKNQLNKLEHVMLSNLTHKPVIKLSEKLSS 88
ID GK ++D SW + GHS+ I A++ E LT + I +E+L S
Sbjct: 48 IDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQ---QGAERGTSYGLTSEQEILFAEELFS 104
Query: 89 ---LTQYKLGHCFYGSDGASAVEVALKMSFHYWYNKGFLNKKKFICLQNSYHGETLGALA 145
L +K+ + S G A A++++ +G + I YHG A
Sbjct: 105 YLGLEDHKIR---FVSSGTEATMTAVRLA------RGITGRSIIIKFLGCYHGH-----A 150
Query: 146 VTNIQSFKEIYTSLLNKTYIITTPDSRNINKGNSANEIARCAIFDLEILLKKNHNKIAAI 205
T +Q TSL T+++ T + + N+ IF ++ H ++A +
Sbjct: 151 DTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDF---QIF-QTVMNSLGH-RVAGV 205
Query: 206 IIEPLVQCAG-GMIMYDSIYLKLVREICNNYNIHLIADEIAVGCGRTGKFFACEHAEIWP 264
I EP+ CA G+++ +++ + + C I DE+ G R + A + P
Sbjct: 206 IFEPI--CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKP 262
Query: 265 DFLCLSKGITGGYLPLSLVMTTDKIYNSIYYKNNINIFLHSHSYSGNPLACCAALATLEI 324
D K I GG LP + V+ I + + + I + + SGNPLA A A++ +
Sbjct: 263 DITVYGK-ILGGGLPAAAVVAHKSIMDHLAPEGTI---FQAGTLSGNPLAMAAGKASINL 318
Query: 325 FNKDNILQRISQ 336
+ ++S
Sbjct: 319 CREQGFYTQLST 330
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 50.7 bits (122), Expect = 7e-07
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 191 LEILLKKNHNKIAAIIIEP-LVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI-AVGC 248
LE L +AA++ EP + GM++ + + + +RE+ Y L+ DE +
Sbjct: 210 LEAALA--DGDVAAVLAEPAMTNI--GMVLPEPGFHEALRELTRRYGTLLVIDETHTISS 265
Query: 249 GRTGKFFACEHAEIWPDFLCLSKGITGGYLPLSLVMTTDKIYNSIY-YKNNINIFLHSHS 307
G G + H + PDFL + K I GG +P ++ + ++ K + HS
Sbjct: 266 GPGG--YTRAHG-LEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKAS---APPGHS 318
Query: 308 -----YSGNPLACCAALATLE 323
S N LA A ATL
Sbjct: 319 GIGTTLSANALAMAAMRATLA 339
>gnl|CDD|223234 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related
enzymes [Coenzyme metabolism].
Length = 388
Score = 40.7 bits (96), Expect = 0.001
Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 45/179 (25%)
Query: 190 DLEILLKKNHNKIAAIIIEPLVQCAGGMIMYDSIY--------LKLVREICNNYNIHLIA 241
LE LL++ A + I+ + ++ L + E+ Y L
Sbjct: 157 HLEALLEEARENGARRKL----------IVTEGVFSMDGDIAPLPELVELAEKYGALLYV 206
Query: 242 DEI-AVG-CGRTGKFFACEHAEIWP---DFL--CLSK--GITGGYLPLSLVMTTDKIYNS 292
DE AVG G G+ EH + P D + L K G +GGY+ S +
Sbjct: 207 DEAHAVGVLGPNGRGL-AEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALID------ 259
Query: 293 IYYKNNINIFLHSHSYSGN--PLACCAALATLEIFNKD----NILQRISQDMKKITKAL 345
Y +N +S P AALA L I + LQ ++ + + KAL
Sbjct: 260 -YLRN----RARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 40.8 bits (96), Expect = 0.001
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 33/188 (17%)
Query: 164 YIITTPDSRNINKGNSANEIARCAIFD------LEILLKKNHNKIAAIIIEP--LVQCAG 215
+I TTP ++ G A+ A F LE L + + +IA +I+EP +
Sbjct: 148 FIGTTP----MSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATADEPQD 203
Query: 216 GMIMYDSIYLKLVREICNNYNIHLIADEIAVGC-----GRTGKFFACEHAEIWPDFLCLS 270
G +L VR +C+ I DE+ G G + I PD C
Sbjct: 204 G-------FLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLY------GIVPDLSCFG 250
Query: 271 KGITGGYLPLSLVMTTDKI--YNSIYYKNNINIFLHSHSYSGNPLACCAALATLEIFNKD 328
K + G+ +S + + + + + +FL S ++ A AA+AT+ I+ +
Sbjct: 251 KALGNGF-AVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE 309
Query: 329 NILQRISQ 336
++++R+ +
Sbjct: 310 DVIERLHE 317
>gnl|CDD|181655 PRK09110, PRK09110, flagellar motor protein MotA; Validated.
Length = 283
Score = 30.9 bits (71), Expect = 1.1
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 22/90 (24%)
Query: 334 ISQDMKKIT---KALTSLITHPK---------------IIN-FRQKGMIWAFDVIIEDPE 374
+ K I KAL L PK ++ RQ+GM+ A + IE+PE
Sbjct: 47 VGNPGKAIKATLKALPKLFKGPKYKKADYMDLLALLYELLRKARQEGMM-ALEAHIENPE 105
Query: 375 QIETFSKKFFVAALKNELLLRPIGNTVYLM 404
+ F+K + LK+ L+ I + + LM
Sbjct: 106 ESPIFAK--YPKILKDHHLVDFICDYLRLM 133
>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated.
Length = 433
Score = 30.7 bits (70), Expect = 1.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 190 DLEILLKKNHNKIAAI-IIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIADEI 244
DLE +K N + IA I +I P G + Y L+ + +I Y++ +I DEI
Sbjct: 161 DLENKVKYNPS-IAGILLINP--DNPTGAV-YPKEILREIVDIAREYDLFIICDEI 212
>gnl|CDD|216758 pfam01877, DUF54, Protein of unknown function DUF54. PH1010 is
composed of five alpha-helices (1-5) and eight
beta-strands (1-8) with the following topology: beta-1,
alpha-1, beta-2, beta-3, alpha-2, alpha-3, beta-4,
beta-5, alpha-4, beta-6, alpha-5, beta-7, beta-8. The
first six beta-strands (1-6) form a slightly twisted
antiparallel beta-sheet and face five alpha-helices on
one side. The last two beta-strands form an antiparallel
beta-sheet in the C-terminus. PH1010 forms a
characteristic homodimer structure in the crystal.
Although this archaebacterial family has no known
function, dimerisation of the molecule is crucial for
function. It would appear that the structure resembles
that of some ribosomal proteins such as the 50S
ribosomal protein L5. Although the structure resembles
that of the RRM-type RNA-binding domain of the ribosomal
L5 protein, the residues involved in RNA-binding in the
L5 protein are not conserved in this family. This
suggests that members of this family do not function as
RNA-binding proteins.
Length = 118
Score = 28.8 bits (65), Expect = 2.7
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
Query: 337 DMKKITKALTSLITHPKIINFRQKGM----IWAFDVIIEDPEQIETFSKKFF-------V 385
D +K+ +AL + +I +G I +V +E + +K +
Sbjct: 14 DEEKVLEALENFFPDAEIEVEEAEGHYGNPITILEVRLER-KGALKSLEKLRELLREQRI 72
Query: 386 AALKNELLLRPIGNTVYLMPPYILNK 411
++EL R GNT+Y L+K
Sbjct: 73 LTARSELEKRVDGNTLYFR----LDK 94
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 29.6 bits (67), Expect = 3.1
Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 16/101 (15%)
Query: 190 DLEILLKKNHNKIAAIIIEPLVQCAGGM--IMYDSIYLKLVREICNNYNIHLIADEI-AV 246
LE LK+ ++ + L+ + ++ +NI L+ DE A
Sbjct: 131 ALEAALKEATEGNKVVLHT----SPHNPTGTVATLEELEKLLDLAKEHNILLLVDEAYAG 186
Query: 247 GCGRTGKFFACEH--AEIWPDFLC--LSK-----GITGGYL 278
+ A AE + SK G GY+
Sbjct: 187 FVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYI 227
>gnl|CDD|226646 COG4178, COG4178, ABC-type uncharacterized transport system,
permease and ATPase components [General function
prediction only].
Length = 604
Score = 29.2 bits (66), Expect = 5.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 328 DNILQRISQDMKKITKALTSL 348
DN QRI +D++ T+ L
Sbjct: 148 DNPDQRIQEDIRNFTETTLDL 168
>gnl|CDD|99740 cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family
(AHBA_syn). AHBA_syn family belongs to pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The members of this CD are
involved in various biosynthetic pathways for secondary
metabolites. Some well studied proteins in this CD are
AHBA_synthase, protein product of pleiotropic regulatory
gene degT, Arnb aminotransferase and pilin
glycosylation protein. The prototype of this family, the
AHBA_synthase, is a dimeric PLP dependent enzyme.
AHBA_syn is the terminal enzyme of
3-amino-5-hydroxybenzoic acid (AHBA) formation which is
involved in the biosynthesis of ansamycin antibiotics,
including rifamycin B. Some members of this CD are
involved in 4-amino-6-deoxy-monosaccharide D-perosamine
synthesis. Perosamine is an important element in the
glycosylation of several cell products, such as
antibiotics and lipopolysaccharides of gram-positive and
gram-negative bacteria. The pilin glycosylation protein
encoded by gene pglA, is a galactosyltransferase
involved in pilin glycosylation. Additionally, this CD
consists of ArnB (PmrH) aminotransferase, a
4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying
enzyme. This CD also consists of several predicted
pyridoxal phosphate-dependent enzymes apparently
involved in regulation of cell wall biogenesis. The
catalytic lysine which is present in all characterized
PLP dependent enzymes is replaced by histidine in some
members of this CD.
Length = 352
Score = 29.0 bits (66), Expect = 5.5
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 8/42 (19%)
Query: 201 KIAAIIIEPLVQCAGGMIMYDSIYLKLVREICNNYNIHLIAD 242
+ AII V G D+I I + + +I D
Sbjct: 106 RTKAII---PVHLYGNPADMDAI-----MAIAKRHGLPVIED 139
>gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
inhibitor (RI)-like subfamily. LRRs are 20-29 residue
sequence motifs present in many proteins that
participate in protein-protein interactions and have
different functions and cellular locations. LRRs
correspond to structural units consisting of a beta
strand (LxxLxLxxN/CxL conserved pattern) and an alpha
helix. This alignment contains 12 strands corresponding
to 11 full repeats, consistent with the extent observed
in the subfamily acting as Ran GTPase Activating
Proteins (RanGAP1).
Length = 319
Score = 28.5 bits (64), Expect = 6.2
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 57 KALKNQLNKLEHVMLSN--LTHKPVIKLSEKLSS---LTQYKLGHCFYGSDGASAVEVAL 111
+ LK N LE + L+N LT + L+E L+S L LG GA+A+ AL
Sbjct: 187 EGLKANCN-LEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASAL 245
Query: 112 KM 113
Sbjct: 246 LS 247
>gnl|CDD|216323 pfam01138, RNase_PH, 3' exoribonuclease family, domain 1. This
family includes 3'-5' exoribonucleases. Ribonuclease PH
contains a single copy of this domain, and removes
nucleotide residues following the -CCA terminus of tRNA.
Polyribonucleotide nucleotidyltransferase (PNPase)
contains two tandem copies of the domain. PNPase is
involved in mRNA degradation in a 3'-5' direction. The
exosome is a 3'-5' exoribonuclease complex that is
required for 3' processing of the 5.8S rRNA. Three of
its five protein components contain a copy of this
domain. A hypothetical protein from S. pombe appears to
belong to an uncharacterized subfamily. This subfamily
is found in both eukaryotes and archaebacteria.
Length = 129
Score = 27.6 bits (62), Expect = 7.4
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 294 YYKNNINIFLHSHSYSGNPLACC-----AALATLEI 324
Y + I I + S G+ L ALA I
Sbjct: 93 YPRWEIRIDVTVLSDDGSLLDAAINAASLALADAGI 128
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.322 0.136 0.410
Gapped
Lambda K H
0.267 0.0715 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,869,461
Number of extensions: 2150251
Number of successful extensions: 2301
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2019
Number of HSP's successfully gapped: 138
Length of query: 430
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 330
Effective length of database: 6,502,202
Effective search space: 2145726660
Effective search space used: 2145726660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (26.9 bits)