BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14486
(472 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340787525|ref|YP_004752990.1| cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
gi|340552792|gb|AEK62167.1| Cysteinyl-tRNA synthetase [Collimonas fungivorans Ter331]
Length = 473
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/478 (57%), Positives = 353/478 (73%), Gaps = 13/478 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R+KQ F PI PGKV +YVCG+T YDYCHLGH R+M+VFD+VQRWLR +
Sbjct: 1 MSDLKIYNTLAREKQPFSPIEPGKVRMYVCGMTVYDYCHLGHGRVMVVFDMVQRWLRQSG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
DVTYVRNITDIDDKII A +N E+I LT RFI+A ED+ L +Q PD++P AT ++
Sbjct: 61 LDVTYVRNITDIDDKIIKRAVENGETISQLTGRFIQAMDEDAAALGVQKPDHEPRATAFV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +IEKL GLAYQ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLALIEKLEHKGLAYQGSDG----DVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNLG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K+++P E++W S+WG GRPGWHIECSAM+ LLG FDIHGGGQDL+
Sbjct: 177 KRDPLDFVLWKAAKDSEPEEVKWTSRWGQGRPGWHIECSAMAEQLLGEQFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ H+FVNYWMH+GFV+I+++KMSKS GNF TIRD+LKKY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGAHGHRFVNYWMHNGFVRIDDEKMSKSLGNFFTIRDVLKKYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NY++ L+ AK +L RLY A+K++ + +D +E HA R AM+D
Sbjct: 297 FILRAHYRSPLNYADSNLDDAKHALTRLYTALKEVSADSLP--LDWSEAHAARVAQAMDD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK--- 416
DFNTP+AIS LFDLAN +NKN+S A+QL+GL LGLL+ S ++FLK +
Sbjct: 355 DFNTPMAISALFDLANEVNKNRSQAAARQLKGLAGVLGLLQRSPEDFLKGRALAGGEVVG 414
Query: 417 ---KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
SE DI LKI R A+ K+F AD IR+EL+ GI+LED P G+TEWRR
Sbjct: 415 NGIAQAALSEQDILLKIQTRQAAKIAKDFSAADLIRKELLAEGILLEDKPGGQTEWRR 472
>gi|399018068|ref|ZP_10720254.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
gi|398102033|gb|EJL92225.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
Length = 465
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/472 (59%), Positives = 354/472 (75%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ+F PI PGKV LYVCG+T YDYCHLGHAR+M+VFD+VQRWLR +
Sbjct: 1 MSNLKIYNTLARDKQVFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+DVTYVRNITDIDDKII A +N E+I LT RFI A EDS L +Q PD++P AT Y+
Sbjct: 61 FDVTYVRNITDIDDKIIHRAIENRETIGQLTQRFIDAMDEDSAALGVQKPDHEPRATAYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I L NGLAYQ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLDLIRTLQNNGLAYQGSDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E++W+S WG GRPGWHIECSAM+ LLG HFDIHGGGQDL+
Sbjct: 177 KRDPLDFVLWKAAKESEPAEVKWDSPWGKGRPGWHIECSAMANDLLGDHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA++H FVNYWMH+GFV+++N+KMSKS GNF TIRD+LKKY+PEV+RF
Sbjct: 237 FPHHENEIAQSEGAHQHGFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+++L R Y A+K ++ +D E HA RF AMND
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARQALTRFYTALK-DVAVDDAVAVDYAEAHALRFAEAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI++LFDLAN INK KS A+QL+ L +GLL+ +D+FLK + ++
Sbjct: 356 DFNTPVAIAVLFDLANEINKTKSPAQARQLKALAGVIGLLQRPADDFLKARVGSDAD--- 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
SE DI+ +I R A+K KNF EAD IR EL G+ILED P G TEWRR
Sbjct: 413 GLSEADIEARIAARVAAKKAKNFAEADGIRAELAAAGVILEDKPGGLTEWRR 464
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1.1|SYC_JANMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 273/472 (57%), Positives = 350/472 (74%), Gaps = 10/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MSALKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V YVRNITDIDDKII A +N ESI LT RFI A ED+ L +Q PD++P ATNY+
Sbjct: 61 YEVNYVRNITDIDDKIIKRAAENGESISALTQRFIDAMDEDAAALGVQKPDHEPRATNYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +IE L NGLAY++++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLGLIEALERNGLAYKSSDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P E++W SKWG+GRPGWHIECSAM+C LLG FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +H FVNYWMH+GFV+++N+KMSKS GNF TIR++L KY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASQHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLAKYDSEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L R+Y A+K + + +D+ E HA RF AMND
Sbjct: 297 FILRAHYRSQLNYSDAHLDDARNALTRMYTALKGVAP--DQAALDMTEAHALRFAEAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+++LF+LAN INK KS +A+QL GL +GLL+ + +FL + +
Sbjct: 355 DFNTPLAVAVLFELANEINKTKSPALARQLVGLAGIVGLLQRPAQQFLHAGLANGEDGEM 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E + +I R A+K KNF EAD+IR EL+ GIILED P G TEWRR
Sbjct: 415 ---ETFVVEQIEARVNAKKAKNFAEADRIRAELLEKGIILEDKPGGLTEWRR 463
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/472 (57%), Positives = 351/472 (74%), Gaps = 11/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ F PI PGKV LYVCG+T YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRACG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I LT+RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YAVTYVRNITDIDDKIIHRAAENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATKYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
P++L +I KL NGLAY+ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PKMLDLIGKLEKNGLAYKASDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+
Sbjct: 177 KRDPLDFVLWKAAKPSEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA++H FVNYWMH+GFV+I+N+KMSKS GNF TIRD+LKKY+PEV+RF
Sbjct: 237 FPHHENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+++L RLY A+KD+P + D E HA+RF A+ND
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARQALTRLYTALKDVPPEAGGLLAD--ESHAQRFTEALND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LF+LAN +N+++S A+QL+ L LGLL+ + DE+LK +
Sbjct: 355 DFNTPMAVSVLFELANEVNRDRSPVQARQLKALAGILGLLQRAPDEYLKGGVAAAD---- 410
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R A+ K+F EAD++R L GIILED P G TEWRR
Sbjct: 411 GLGQAEIEALIEARKAAKAGKDFAEADRLRAVLTEAGIILEDKPGGLTEWRR 462
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/472 (57%), Positives = 344/472 (72%), Gaps = 13/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQIF PI PGKV LYVCG+T YD+CHLGHAR+M+VFD+VQRWLR
Sbjct: 34 MSELKIYNTLARDKQIFSPIEPGKVRLYVCGMTVYDFCHLGHARVMVVFDMVQRWLRSVG 93
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A N ESI+ LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 94 YDVTYVRNITDIDDKIIKRALDNGESIRQLTERFIVAMNEDADALGVQRPDHEPRATQYV 153
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L++I KL NGLAY +G DVNY+VR F YG+LSG+ + + + N
Sbjct: 154 PQMLELIGKLQANGLAYLAEDG----DVNYAVREFPGYGRLSGKSLDDLRAGERVDVNTG 209
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S WG GRPGWHIECSAM+ LLG HFDIHGGGQDL+
Sbjct: 210 KRDPLDFVLWKAAKQGEPDEAKWDSAWGCGRPGWHIECSAMAGDLLGEHFDIHGGGQDLQ 269
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ H FVNYWMH+GFV+++N+KMSKS GNF TIRD+L+KY+PEV+RF
Sbjct: 270 FPHHENEIAQSEGAHGHAFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLQKYDPEVVRF 329
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+++L RLY A+K++P +E A+RF AMND
Sbjct: 330 FILRAHYRSPLNYSDAHLDDARQALTRLYTALKEVPPAASGST---DEAPARRFAEAMND 386
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LF+LAN +N+ +S ++QLR LG LGLL+ + FLK +
Sbjct: 387 DFNTPLALSVLFELANEVNRTRSADASRQLRQLGARLGLLQRDPEAFLKGGVAAG----- 441
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I RS A+ ++F AD+IR EL G++LED P G TEWRR
Sbjct: 442 GIDQAAIEALIAARSAAKAGRDFAAADRIRAELTAAGVVLEDKPGGLTEWRR 493
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/472 (58%), Positives = 354/472 (75%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYNS +R KQ+F PI PGKV +YVCG+T YDYCH+GHAR+M+ FD+V RWL+
Sbjct: 1 MDSLQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N ESI +LT+RF + ED+ L I PPD++P AT Y+
Sbjct: 61 YEVTYVRNITDIDDKIINRAGENGESISSLTARFTQYMHEDTSALGILPPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
P++L++I KL NGLAYQ+ +G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PEMLELIAKLEKNGLAYQSEDG----DVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+S+WGAGRPGWHIECSAMS LLG HFDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA H FVNYWMH+GFV+++N+KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKNYDAEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+RSHYRS +NYS+ +L+ A+ +L RLY A+KDI + K +D E HA RF AMND
Sbjct: 297 FIIRSHYRSPLNYSDAHLDDARSALTRLYTALKDIDVQD--KPVDWQEEHAVRFSRAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP A+++LF+LAN +N+ S+++A QL+ LG+ LGLLE +FL+ N + +
Sbjct: 355 DFNTPEAVAVLFELANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQGNGTVDENE-- 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E I+ +I R EA+K ++F +ADKIR EL+ GI+LED P GKTEWRR
Sbjct: 413 ---EKWIEAQIQARREAKKTRDFAKADKIRNELLEKGIVLEDKPGGKTEWRR 461
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/472 (58%), Positives = 349/472 (73%), Gaps = 11/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ F PI PGKV LYVCG+T YDYCH+GHAR+++VFD+VQRWLR +
Sbjct: 1 MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E+I LT+RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YEVTYVRNITDIDDKIIKRAVENGETIAQLTNRFIDAMNEDAAALGVQRPDHEPRATQYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL NGLAY+ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLDLIGKLEKNGLAYKASDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+
Sbjct: 177 KRDPLDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA++H FVNYWMH+GFV+I+N+KMSKS GNF TIRD+LKKY+PEV+RF
Sbjct: 237 FPHHENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKKYDPEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+++L RLY A+KD+P + D E HA R A+ND
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGLVAD--EAHAVRLADALND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI++LF+LAN +N+++S A+QL+ L LGLL+ E+LK +
Sbjct: 355 DFNTPVAIAVLFELANEVNRSRSPVQARQLKALAGILGLLQREPGEYLKGGVAAAE---- 410
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E +I+ I R A+ KNF EAD+IR EL GIILED P G TEWRR
Sbjct: 411 GLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGGLTEWRR 462
>gi|134094511|ref|YP_001099586.1| cysteinyl-tRNA synthetase [Herminiimonas arsenicoxydans]
gi|166200149|sp|A4G4M2.1|SYC_HERAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|133738414|emb|CAL61459.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Herminiimonas
arsenicoxydans]
Length = 462
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/472 (58%), Positives = 354/472 (75%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R+KQ+F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MSALKIYNTLAREKQLFTPIDPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+DVTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P ATNY+
Sbjct: 61 FDVTYVRNITDIDDKIIKRAAENGETISQLTQRFIDAMDEDAAALGVQKPDHEPRATNYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I+ L NGLAY+ +GDVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLGLIDMLERNGLAYK----AADGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK SK N+P E++W+SKWG+GRPGWHIECSAM+C LLG FDIHGGG DL+
Sbjct: 177 KHDPLDFVLWKSSKENEPEEVKWSSKWGSGRPGWHIECSAMACELLGEQFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA H FVNYWMH+GFV+++N+KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L R+Y A+KD+ + +D+ E HA RFI AMND
Sbjct: 297 FILRAHYRSQLNYSDAHLDDARNALTRMYTALKDVAPDHLP--LDMTEAHAVRFIDAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+AI++LF+LAN IN+ KS +A+QL GL +GLL+ + +FL +
Sbjct: 355 DFNTPLAIAVLFELANEINREKSPVLARQLIGLAGIVGLLQRPAQQFLHAGL-----AGA 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ E I +I R++A+K KNF EAD+IR L+ GIILED P G TEWRR
Sbjct: 410 DEMETLIIGQIAARADAKKAKNFAEADRIRAALLEKGIILEDKPGGLTEWRR 461
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/472 (56%), Positives = 343/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASA 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIRRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQANGLAYQ----AADGDVNYAVRRFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P D +EPH +RF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPA-EAGAQPDWSEPHGQRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA+ +NK +S +A QL LG +GLL FL+ + +
Sbjct: 356 DFNTPVAMAVLFELASEVNKTRSPALASQLAALGGVMGLLGRDPHAFLQGGVGAA-ADGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +E ++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 415 DTAE--VEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|390568854|ref|ZP_10249146.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|420252649|ref|ZP_14755752.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
gi|389939203|gb|EIN01040.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|398054156|gb|EJL46292.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
Length = 465
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 348/473 (73%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G+V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDI+DKII A +N ESI+ LT RFI A ED+ L I+ PD +P AT++I
Sbjct: 61 YKVTYVRNITDIEDKIIRRAVENGESIRALTDRFIAALHEDADALGIERPDLEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNY+VR F NYG LSG+ + + N+
Sbjct: 121 PQMLGMIEKLEQNGYAYQ----AADGDVNYAVRKFANYGALSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK ++P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQSKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA + FVNYWMH+G+V+I+N+KMSKS GNF TIR++L KY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATRQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLAKYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+ +L+ A+ +L RLY A+KD P + ID NE HA+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDTHLDDARSALARLYTALKDTPPGAGE--IDWNEAHAQRFRAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +N+ + +A+QL GL LGLL +L+ +E + +
Sbjct: 355 DFNTPVAVSVLFELASEVNRTRDAALARQLHGLARVLGLLRREPRAYLQQAAGSESEGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I++KI R A++ K++ EAD+IR+EL++ GI LED P G TEWRR+
Sbjct: 415 DVAA--IEVKIAARVAAKQAKDYAEADRIRKELLDAGIALEDKPGGLTEWRRV 465
>gi|421749862|ref|ZP_16187217.1| cysteinyl-tRNA ligase [Cupriavidus necator HPC(L)]
gi|409771193|gb|EKN53573.1| cysteinyl-tRNA ligase [Cupriavidus necator HPC(L)]
Length = 462
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 341/472 (72%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 1 MHPLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYV+NITDIDDKII A +N E+I LT RFI ED+ L IQ PD++P AT Y+
Sbjct: 61 YEVTYVQNITDIDDKIIRRAAENGETIGELTERFIGYMHEDAAALGIQRPDHEPRATQYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL GLAYQ ++G DVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLDIIGKLEAKGLAYQASDG----DVNYAVRKFNGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K+++P E +W SKWGAGRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KHDPLDFVLWKSAKDSEPAESKWPSKWGAGRPGWHIECSAMSCALLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV+IN++KMSKS GNF TIR++LK+Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGKPFVNVWMHNGFVRINDEKMSKSLGNFFTIREVLKQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ L RLY A+KD+ + +D +EPHA+RF AM D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARHGLTRLYTALKDVQPDT--QPLDWDEPHARRFAEAMGD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LFDLA +N++ S A+QL+GL LGLL + FL+ +
Sbjct: 355 DFNTPIAVSVLFDLAGEVNRSGSPAAARQLKGLAATLGLLGRDAHAFLQGG-----ADSA 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ +I R +A+ +NF EAD+IR EL+ G++LED P G TEWRR
Sbjct: 410 GIAPEQIEERIAARKQAKAERNFAEADRIRAELLEAGVVLEDKPGGVTEWRR 461
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9.1|SYC_CUPNH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/472 (56%), Positives = 340/472 (72%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 1 MQLLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYV+NITDIDDKII A +N E+I LT+RFI+ ED+ L + PD++P AT+Y+
Sbjct: 61 YEVTYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL GLAYQ ++G DVNYSVR F YGKLSG+ + + N+
Sbjct: 121 PQMLDMIGKLEAKGLAYQASDG----DVNYSVRKFAGYGKLSGKSLEDLRAGERVSANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+SKWGAGRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV+IN++KMSKS GNF TIR++LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+KD +D +EPHA+RF AM D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCA--VDWDEPHARRFAEAMGD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LFDLA+ IN+ S A+QL+GL LGLLE FL+ + +
Sbjct: 355 DFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGG-----RSDD 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S I+ I R A+ +NF EAD+IR +L+ GI+LED P G TEWRR
Sbjct: 410 GISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLEDKPGGATEWRR 461
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 339/472 (71%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASA 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQANGLAYQ----AADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D +E H +RF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAK-PDWSESHGQRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA+ +NK +S + QL LG +GLL FL+ +
Sbjct: 356 DFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFLQGGVGAAAD--- 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDTVEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 340/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASA 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQANGLAYQ----AADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D +E H +RF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAK-PDWSESHGQRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA+ +NK +S + QL LG +GLL FL+ +
Sbjct: 356 DFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFLQGGVGA---AAD 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDAAEVEARIEARRVAKAERDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|73540824|ref|YP_295344.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
gi|109894927|sp|Q473D3.1|SYC_CUPPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|72118237|gb|AAZ60500.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
Length = 462
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 341/472 (72%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 1 MQLLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVT+V+NITDIDDKII A +N E+I LT+RFI+ ED+ L I PD++P AT+Y+
Sbjct: 61 YDVTFVQNITDIDDKIIRRAAENGETIGQLTTRFIQYMHEDADALGIVRPDHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL NGLAYQ +GDVNYSVR F YGKLSG+ + + N+
Sbjct: 121 PQMLDLIGKLEANGLAYQ----ATDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVTANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +WNSKWG GRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKESEPPESKWNSKWGMGRPGWHIECSAMSCTLLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIR++LK+Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGKPFVNVWMHNGFVRVNDEKMSKSLGNFFTIREVLKEYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+KD Y +D E HAKRF AM D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARHALTRLYTALKDTQPGGYA--VDWEEAHAKRFAEAMCD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LFDLA+ +N+ S A+QL+GL LGLLE FL+ KK
Sbjct: 355 DFNTPIAVSVLFDLASEVNRTGSSVAARQLKGLAGTLGLLERDPHTFLQGG-----KKVD 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++I+ I R A+ +NF EAD+IR +L+ GI+LED P G TEWRR
Sbjct: 410 GPSPDEIEGLIAARKTAKAERNFAEADRIRADLLAAGIVLEDKPGGATEWRR 461
>gi|339325369|ref|YP_004685062.1| cysteinyl-tRNA synthetase [Cupriavidus necator N-1]
gi|338165526|gb|AEI76581.1| cysteinyl-tRNA synthetase CysS [Cupriavidus necator N-1]
Length = 462
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/472 (56%), Positives = 339/472 (71%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 1 MQLLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYV+NITDIDDKII A +N E+I LT+RFI+ ED+ L + PD++P AT+Y+
Sbjct: 61 YEVTYVQNITDIDDKIIRRAAENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL GLAYQ ++G DVNYSVR F YGKLSG+ + + N+
Sbjct: 121 PQMLDMIGKLEARGLAYQASDG----DVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+SKWGAGRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV+IN++KMSKS GNF TIR++LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGKPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVLKSYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+KD +D +EPHA+RF AM D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCA--VDWDEPHARRFAEAMGD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LFDLA+ IN+ S A+QL+ L LGLLE FL+ + +
Sbjct: 355 DFNTPIAMSVLFDLASEINRTGSTAAARQLKALAGTLGLLERDPHTFLQGG-----RSDD 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S I+ I R A+ +NF EAD+IR +L+ GI+LED P G TEWRR
Sbjct: 410 GISPEQIETLIAARKTAKLERNFAEADRIRAQLLEAGIVLEDKPGGATEWRR 461
>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
Length = 463
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/472 (56%), Positives = 338/472 (71%), Gaps = 11/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E++ LT RFI A ED+ L +Q PDY+P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDYEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLGMIGKLQTNGLAYQ----ATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E RW S WG GRPGWHIECSAMSC LLG HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D NE H KRF+ AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAK-PDWNESHGKRFLEAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +NK +S ++A QL L LGLL FL+ + +
Sbjct: 356 DFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVLGLLGRDPHAFLQGGVSPD----- 410
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 411 GLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGGVTEWRR 462
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903636|ref|ZP_18327149.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931509|gb|EIP88910.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 343/474 (72%), Gaps = 11/474 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I++LTSRF +A D L ++ PD +P AT++I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIQSLTSRFTRAMNVDFDALGVERPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLEANGYAYQAKDG----DVNYSVRKFANYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+GAGRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++++KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKD-IPKINYKKIIDLNEPHAKRFIIAMN 358
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD P + +D +E HA+RF AMN
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDV---APLDWSEAHARRFAAAMN 353
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNT VA+++LF+LA +N+ + +A+QL+ L LGLL EFL+ R
Sbjct: 354 DDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGVLGLLGREPREFLQQAAGAARAGA 413
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 414 LEPEE--IEAKIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|299067219|emb|CBJ38416.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CMR15]
Length = 465
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 344/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I TLT+RFI A ED+ L +Q PD +P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGTLTNRFIAAMHEDADALGVQRPDREPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQHNGLAYQ----AADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQSEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P + D NEPH KRF AM+D
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPA-EAQARPDWNEPHGKRFREAMHD 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA INK +S +A QL LG +GLL FL+ + +
Sbjct: 356 DFNTPVAMAVLFELATEINKTRSPALASQLAALGGVMGLLVRDPHAFLQGGVGAA-ADGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +E ++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 415 DTAE--VETRIEARRAAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 345/472 (73%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYNS +R K++F PI PGKV +YVCG+T YDYCH+GHAR+M+ FD+V RWL+
Sbjct: 1 MDSLQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E I +LTSRF + ED+ L I PPD++P AT Y+
Sbjct: 61 YEVTYVRNITDIDDKIINRAAENGEPISSLTSRFTQYMHEDTCALGILPPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
P++L++I KL NGLAYQ+ +G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PEMLELIGKLEKNGLAYQSTDG----DVNYSVRDFEGYGKLSGKSLDDLRAGERVDINTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W S+WG GRPGWHIECSAMS LLG HFDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA H FVNYWMH+GFV+++N+KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASHHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKSYDAEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+RSHYRS +NYS+ +L+ AK +L RLY A+KD+ + + +D + +AKRF AMND
Sbjct: 297 FIIRSHYRSPLNYSDAHLDDAKNALTRLYTALKDVDVKD--QAVDWDSEYAKRFASAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP A+++LF+LAN +N+ ++ QL+ L LGLLE +FL+ + + +
Sbjct: 355 DFNTPEAVAVLFELANEVNRTHLAELGSQLKALAGVLGLLERDPRQFLQGDGAVDEGE-- 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E I+ +I R +A+K KNF EADKIR EL+ GI+LED P G TEWRR
Sbjct: 413 ---EKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLEDKPGGLTEWRR 461
>gi|194289323|ref|YP_002005230.1| cysteinyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|229558628|sp|B3R4D1.1|SYC_CUPTR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|193223158|emb|CAQ69163.1| cysteine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
Length = 462
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 341/472 (72%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 1 MQPLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYV+NITDIDDKII A +N E+I LT+RFI+ ED+ L + PD++P AT+Y+
Sbjct: 61 YEVTYVQNITDIDDKIIRRAVENGETIGELTTRFIQYMHEDAAALGVIRPDHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL GLAYQ ++G DVNYSVR F YGKLSG+ + + N+
Sbjct: 121 PQMLDMIGKLEAKGLAYQASDG----DVNYSVRKFDGYGKLSGKSLEDLRAGERVSANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+SKWGAGRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCALLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV+IN++KMSKS GNF TIR++LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGKPFVNLWMHNGFVRINDEKMSKSLGNFFTIREVLKAYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+KD +D +EPHAKRF AM D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCA--VDWDEPHAKRFAEAMGD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+S+LFDLA+ IN+ S A+QL+GL LGLLE FL+ K
Sbjct: 355 DFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGG-----KSAD 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++I+ I R A+ +NF EAD+IR +L+ GI+LED P G TEWRR
Sbjct: 410 GPSPDEIEKLIAARKAAKAERNFAEADRIRAQLLEAGIVLEDKPGGATEWRR 461
>gi|187928101|ref|YP_001898588.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
gi|229558781|sp|B2U9P8.1|SYC_RALPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187724991|gb|ACD26156.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
Length = 463
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 342/472 (72%), Gaps = 11/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E++ LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGRLQTNGLAYQ----ATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKTFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D +E H KRF+ AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAK-PDWSESHGKRFLEAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +NK +S ++A QL L +GLL FL+ + + V
Sbjct: 356 DFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVIGLLGRDPHVFLQGGVSAD---GV 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +E ++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 DAAE--VEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGGLTEWRR 462
>gi|413958323|ref|ZP_11397562.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413940903|gb|EKS72863.1| cysteinyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 465
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/473 (56%), Positives = 343/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M++LRIYN+ +R KQ F P+ G+V +YVCGIT YDYCH+GHAR+ +VFDIVQRWLR
Sbjct: 1 MNSLRIYNTLARDKQTFTPLRAGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLREIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +NNESIK+LT RFI+A ED L + D +P AT ++
Sbjct: 61 YKVTYVRNITDIDDKIIRRAVENNESIKSLTQRFIEAMYEDMDALGVARADIEPRATEFV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI+ L NG AYQ +G DVNYSVR F +YGKLSG+ I + N+
Sbjct: 121 PQMLGMIDALHANGYAYQAKDG----DVNYSVRKFTDYGKLSGKSIEDLRAGERVTANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P + WNSKWG GRPGWHIECSAM C LLG FDIHGGG DL+
Sbjct: 177 KEDPLDFVLWKQSKAGEPEDTGWNSKWGRGRPGWHIECSAMGCTLLGEQFDIHGGGMDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +FVNYWMH+GFV+I+++KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKQFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ AK +L RLY A+KD+ N + +D +E +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQ--LDWSEANAQRFQSAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LFDLA+ +N+ + +A+QL+GL LGLL+ FL+ + +
Sbjct: 355 DFNTPVAVSVLFDLASEVNRTRDAALARQLKGLAGVLGLLQREPRAFLQRASGAGSSEGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
S +I+ KI R A++ KN+ EAD+IR L+ GI LED P G TEWRR+
Sbjct: 415 --SPQEIEAKIAERIAAKRAKNYAEADRIRAALLEAGIALEDKPGGSTEWRRV 465
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 342/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEQLESNGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D +EPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWSEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ + +A+QL+ L LGLL FL+ R +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAARDGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ ++I+ KI R A++ K++ EAD+IR EL++ GI LED P G TEWRR+
Sbjct: 415 --AADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGSTEWRRV 465
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 343/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITD+DDKII A +N ESIK+LT RFI A +D L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ ++G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEQLEANGYAYQASDG----DVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEP+A+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPYAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQGAGSAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ ++I+ +I R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 --AADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|17545886|ref|NP_519288.1| cysteinyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
gi|21264003|sp|Q8Y077.1|SYC_RALSO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17428181|emb|CAD14869.1| probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs)
protein [Ralstonia solanacearum GMI1000]
Length = 465
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 341/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT+RFI A ED+ L +Q PD +P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDREPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGRLQDNGLAYQ----AADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCDLLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQSEGASGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+++L+ A+ +L RLY A+KD+P + D NEPH KRF AM+D
Sbjct: 297 FILRSHYRSDLNYSDVHLDDARHALTRLYTALKDVPA-EAQARPDWNEPHGKRFREAMHD 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA +NK +S +A QL LG +GLL FL+ +
Sbjct: 356 DFNTPVAMAVLFELATEVNKTRSPALASQLAALGGVMGLLVRDPHAFLQGGVGA---AAD 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDAAEVEARIEARRAAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 342/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITD+DDKII A +N ESIK+LT RFI A +D L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDVDDKIIRRAVENGESIKSLTDRFIGAMHDDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ ++G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEQLEANGYAYQASDG----DVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEP+A+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPYAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQGAGSAHAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ ++I+ +I R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 --AADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|94310030|ref|YP_583240.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|93353882|gb|ABF07971.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 491
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/473 (57%), Positives = 340/473 (71%), Gaps = 14/473 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 30 MQQLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 89
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYV+NITDIDDKII A +N E+I LT+RFI+ ED+ L + PDY+P AT Y+
Sbjct: 90 YDVTYVQNITDIDDKIIRRAAENGETIGQLTTRFIQYMHEDATALGVIRPDYEPRATEYV 149
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
PQ+L +IEKL GLAYQ +GDVNYSVR F YGKLSG+ + ++N N+
Sbjct: 150 PQMLNIIEKLEAKGLAYQ----ATDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVN-AND 204
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K +P E +W+SKWG+GRPGWHIECSAMSC LLG HFDIHGGG DL
Sbjct: 205 AKQDPLDFVLWKSAKATEPPESKWDSKWGSGRPGWHIECSAMSCTLLGEHFDIHGGGADL 264
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK+Y+ EV+R
Sbjct: 265 QFPHHENEIAQSEGASGRPFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVLKEYDAEVVR 324
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FFILR+HYRS +NYS+ +L+ A+ +L RLY A+K+ +D E HAKRF AMN
Sbjct: 325 FFILRAHYRSPLNYSDAHLDDARHALTRLYTALKETQPGGCA--VDWEESHAKRFAEAMN 382
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTP+A+S+LFDLA+ +N+ S+ A QL+ LG LGLLE FL+
Sbjct: 383 DDFNTPIAMSVLFDLASEVNRTGSVAAAHQLKALGGTLGLLERDPHTFLQGGHVAG---- 438
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S I+ +I R A+ +NF EAD+IR EL+ G++LED P G TEWRR
Sbjct: 439 -SLSGEQIEAQIAARRAAKAARNFAEADRIRAELLEAGVVLEDKPGGATEWRR 490
>gi|430806605|ref|ZP_19433720.1| cysteinyl-tRNA ligase [Cupriavidus sp. HMR-1]
gi|429501114|gb|EKZ99459.1| cysteinyl-tRNA ligase [Cupriavidus sp. HMR-1]
Length = 462
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/473 (57%), Positives = 341/473 (72%), Gaps = 14/473 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR
Sbjct: 1 MQQLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYV+NITDIDDKII A +N E+I LT+RFI+ ED+ L + PDY+P AT Y+
Sbjct: 61 YDVTYVQNITDIDDKIIRRAAENGETIGQLTTRFIQYMHEDATALGVIRPDYEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
PQ+L +IEKL GLAYQ +GDVNYSVR F YGKLSG+ + ++N N+
Sbjct: 121 PQMLNIIEKLEAKGLAYQ----ATDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVN-AND 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K ++P E +W+SKWG+GRPGWHIECSAMSC LLG HFDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKASEPPESKWDSKWGSGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK+Y+ EV+R
Sbjct: 236 QFPHHENEIAQSEGASGRPFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVLKEYDAEVVR 295
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FFILR+HYRS +NYS+ +L+ A+ +L RLY A+K+ +D E HAKRF AMN
Sbjct: 296 FFILRAHYRSPLNYSDAHLDDARHALTRLYTALKETQPGGCA--VDWEESHAKRFAEAMN 353
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTP+A+S+LFDLA+ +N+ S+ A QL+ LG LGLLE FL+
Sbjct: 354 DDFNTPIAMSVLFDLASEVNRTGSVAAAHQLKALGGTLGLLERDPHTFLQGGHVAG---- 409
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S I+ +I R A+ +NF EAD+IR EL+ G++LED P G TEWRR
Sbjct: 410 -SLSGEQIEAQIAARRAAKAARNFAEADRIRAELLEAGVVLEDKPGGATEWRR 461
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 342/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M++LRIYN+ +R KQ+F P+ G+V +YVCGIT YDYCH+GHAR+ +VFDIVQRWLR +
Sbjct: 1 MNSLRIYNTLARDKQLFTPLREGEVRMYVCGITVYDYCHVGHARMFVVFDIVQRWLRESG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +NNE IK LT RFI A ED L + D +P AT++I
Sbjct: 61 YKVTYVRNITDIDDKIIRRAVENNEPIKALTHRFIDAMHEDMDALGVARADIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI+ L NG AY +G DVNY+VR F +YGKLSG+ I + N+
Sbjct: 121 PQMLGMIDALQANGYAYHAKDG----DVNYAVRKFADYGKLSGKSIEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + W+SKWG GRPGWHIECSAM C LLG FDIHGGG DL+
Sbjct: 177 KEDPLDFVLWKQAKPGEPVDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGGMDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+I+++KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKTFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ AK +L RLY A+KD+ N + +D NE +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQ--LDWNEANAQRFQSAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LFDLA+ +N+ + +A+QL+ L LGLL+ FL+ T ++ +
Sbjct: 355 DFNTPVAVSVLFDLASEVNRTRDSALARQLKELAGVLGLLQREPRAFLQQAGGTGSQEGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 TPQE--IEAKIAERIAAKQAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
Length = 465
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 342/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI G+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YGVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQANGLAYQ----AADGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D +E H +RF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAK-PDWSESHGQRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA+ +NK +S +A QL LG +GLL FL+ + +
Sbjct: 356 DFNTPVAMAVLFELASEVNKTRSAALASQLAALGGVMGLLGRDPHAFLQGGVGAA-ADGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +E ++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 415 DTAE--VEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|171320751|ref|ZP_02909762.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171094016|gb|EDT39118.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 465
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/473 (56%), Positives = 339/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLETNGYAYQAGDG----DVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQGTGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL++ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGSTEWRRV 465
>gi|421888583|ref|ZP_16319670.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum K60-1]
gi|378966060|emb|CCF96418.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum K60-1]
Length = 465
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 339/472 (71%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI G+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD +P AT Y+
Sbjct: 61 YGVTYVRNITDIDDKIIKRAVENGETIGALTDRFIAAMHEDADALGVQRPDREPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGKLQANGLAYQ----AADGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKVDEPAESRWPSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D +EPH +RF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAK-PDWSEPHGQRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA+ +NK +S +A QL LG +GLL FL+ +
Sbjct: 356 DFNTPVAMAVLFELASEVNKTRSAALASQLAALGGVMGLLGRDPHAFLQGGVGAAAD--- 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDTVEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|407713995|ref|YP_006834560.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236179|gb|AFT86378.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 465
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/473 (55%), Positives = 336/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+IK+LT RFI A ED+ L I PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +G DVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLEANGYAYQAKDG----DVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKQSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYWMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+ D+ +D NE HA+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALGRLYTALTDVAPDG--AALDWNEAHAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG LGLL +L+ + +
Sbjct: 355 DFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVEGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ KI R A++ K++ AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 415 DPAA--IEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGGLTEWRRV 465
>gi|107028742|ref|YP_625837.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116690099|ref|YP_835722.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|254247826|ref|ZP_04941147.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
gi|123370109|sp|Q1BHP1.1|SYC_BURCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200131|sp|A0K8K2.1|SYC_BURCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|105897906|gb|ABF80864.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116648188|gb|ABK08829.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|124872602|gb|EAY64318.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
Length = 465
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/473 (56%), Positives = 341/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +GDVNYSVR F +YGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLETNGYAYQ----AADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P W SK+G GRPGWHIECSAM C LLG+HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ +I R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 465
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 340/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLETNGYAYQ----AADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQATGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL++ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGSTEWRRV 465
>gi|187924487|ref|YP_001896129.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187715681|gb|ACD16905.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 465
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/473 (55%), Positives = 341/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+IK LT RFI A ED+ L IQ PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRAVENGETIKALTDRFIDALHEDADALGIQRPDLEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ ++G DVNY+VR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEQLEANGYAYQASDG----DVNYAVRKFANYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVN+WMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ + +D NE HA+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDAAE--LDWNEAHAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG +GLL +L+ + +
Sbjct: 355 DFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVIGLLGREPRAYLQQAAGAAAEGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ I+ KI R A++ K++ AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 415 EPAA--IEAKIAARVAAKQAKDYAAADRIRAELLEAGVALEDKPGGSTEWRRV 465
>gi|300691854|ref|YP_003752849.1| cysteine tRNA synthetase (cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
gi|299078914|emb|CBJ51575.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
Length = 465
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 341/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT+RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YG+LSG+ + + N+
Sbjct: 121 PQMLSMIGRLQDNGLAYQ----AADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P + D NEPH KRF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADAR-PDWNEPHGKRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA+ +NK +S +A QL L +GLL FL+ +
Sbjct: 356 DFNTPVAMAALFELASEVNKTRSPALASQLVALAGVMGLLGRDPHAFLQGGVGA---AAD 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDAAEVEARIEARRAAKAARDFARADSIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|395761809|ref|ZP_10442478.1| cysteinyl-tRNA ligase [Janthinobacterium lividum PAMC 25724]
Length = 465
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/474 (55%), Positives = 350/474 (73%), Gaps = 13/474 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R+KQ+F P+ GKV +YVCG+T YDYCH+GHAR+M+ FD++ RWL+ +
Sbjct: 1 MSNLKIYNTLAREKQVFVPMEVGKVRMYVCGMTIYDYCHIGHARMMMAFDVIYRWLKASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+DVTYVRNITDIDDKII A +N E+I LT+RF + ED+ L I PD+ P AT Y+
Sbjct: 61 FDVTYVRNITDIDDKIIRRAVENGETISQLTTRFTRYMDEDTAALGILTPDHTPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---N 177
PQ++++IE+L GLAYQ +G DVNY+VRNF YGKLSG+ S + + E+ N
Sbjct: 121 PQMVRLIEQLEAKGLAYQGGDG----DVNYAVRNFPGYGKLSGK--SPDDLRAGERVDVN 174
Query: 178 NFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K+DPLDF LWK +K ++P E++W++KWG GRPGWHIECSAMSC LLG FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKSAKESEPEEVKWDTKWGRGRPGWHIECSAMSCALLGEQFDIHGGGAD 234
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L+FPHHENEIAQSEGA+ H VNYW+H+GFV+++N+KMSKS GNF TIR++L+K++ EVI
Sbjct: 235 LQFPHHENEIAQSEGAFGHASVNYWIHNGFVRLDNEKMSKSLGNFFTIREVLQKFDAEVI 294
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAM 357
RFFILR+HYRS +NYS+++L+ A+ SL RLY A+ D+ + + ID NE HA R AM
Sbjct: 295 RFFILRAHYRSPLNYSDVHLDDARLSLTRLYTALSDV--VVEEGAIDWNEAHAARVAEAM 352
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
NDDFNTP+A++ LFDLA +NK+KS +A+QL+GL + GLLE + +FL+ +
Sbjct: 353 NDDFNTPLAVAALFDLATEVNKSKSPALARQLKGLASVFGLLERTPQQFLQATVGA--AA 410
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I RS A+K ++F ++DKIR EL+ GIILED P+G T WRR
Sbjct: 411 GGEDASAGIEAAIAARSAAKKARDFAQSDKIRAELLAAGIILEDKPDGSTNWRR 464
>gi|393775410|ref|ZP_10363723.1| CysS protein [Ralstonia sp. PBA]
gi|392717460|gb|EIZ05021.1| CysS protein [Ralstonia sp. PBA]
Length = 462
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/472 (56%), Positives = 342/472 (72%), Gaps = 12/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L IYN+ +R+KQ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MQSLIIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A N E+I LT RFI ED+ L +Q PD++P AT YI
Sbjct: 61 YAVTYVRNITDIDDKIIRRAVDNGETIGELTGRFIGFMHEDADALGVQRPDHEPRATQYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I++L NGLAYQ ++G DVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLGIIDRLADNGLAYQASDG----DVNYAVRKFAGYGKLSGKSLEDLRAGERVASNDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K ++P E +W+S+WG GRPGWHIECSAMSC LLG HFDIHGGG DL+
Sbjct: 177 KHDPLDFVLWKSAKESEPEETKWDSRWGKGRPGWHIECSAMSCALLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGASGQTFVNLWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS ++YS L+ AK SL RLY A+KD+ + +D +E HA RF AMND
Sbjct: 297 FILRAHYRSELHYSNANLDDAKASLTRLYTALKDVQPDG--QPLDWDEAHAARFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFN+P+AI++LF+LA +NK++S +A+QL GL LGLL+ + +FL + +
Sbjct: 355 DFNSPLAIAVLFELAGEVNKSRSGALARQLAGLAQVLGLLDRAPQDFLHGAVAAD----- 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
DI+ +I R A++ ++F EAD+IR L++ G++LED P G TEWRR
Sbjct: 410 GLQPADIEAQIEARRAAKQARDFAEADRIRAALLSAGVVLEDKPGGVTEWRR 461
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/473 (54%), Positives = 336/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E+IK+LT RFI A ED+ L I PD +P AT++I
Sbjct: 61 YEVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +G DVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLEANGYAYQAKDG----DVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYWMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+ D+ +D NE HA+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALGRLYTALTDVAPDG--AALDWNEAHAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG LGLL +L+ + +
Sbjct: 355 DFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVEGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ I+ KI R+ A++ K++ AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 415 EPAA--IEAKIAERAAAKQAKDYAAADRIRAELLEAGVALEDKPGGLTEWRRV 465
>gi|78066853|ref|YP_369622.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
gi|109894879|sp|Q39EY8.1|SYC2_BURS3 RecName: Full=Cysteine--tRNA ligase 2; AltName: Full=Cysteinyl-tRNA
synthetase 2; Short=CysRS 2
gi|77967598|gb|ABB08978.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
Length = 465
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/473 (56%), Positives = 338/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A +D L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHDDESALGIQRPDIEPRATEFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLETNGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEDPEGTSWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEADTLA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLETGIALEDKPGGSTEWRRV 465
>gi|206560514|ref|YP_002231278.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|421870246|ref|ZP_16301881.1| Cysteinyl-tRNA synthetase [Burkholderia cenocepacia H111]
gi|444358640|ref|ZP_21160030.1| cysteine--tRNA ligase [Burkholderia cenocepacia BC7]
gi|444371570|ref|ZP_21171120.1| cysteine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|229558622|sp|B4ED73.1|SYC_BURCJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|198036555|emb|CAR52452.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|358069772|emb|CCE52759.1| Cysteinyl-tRNA synthetase [Burkholderia cenocepacia H111]
gi|443595177|gb|ELT63779.1| cysteine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|443603684|gb|ELT71675.1| cysteine--tRNA ligase [Burkholderia cenocepacia BC7]
Length = 465
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 340/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDESALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ ++G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLETNGYAYQASDG----DVNYSVRKFTNYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG+HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVDADTLA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|170733433|ref|YP_001765380.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|229558621|sp|B1JUK8.1|SYC_BURCC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169816675|gb|ACA91258.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 465
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/473 (56%), Positives = 340/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ +GDVNYSVR F +YGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLETNGYAYQ----AADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P W SK+G GRPGWHIECSAM C LLG+HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKRAKEDEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPH +RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLA--LDWNEPHGQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ +I R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|115352164|ref|YP_774003.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122322791|sp|Q0BDV4.1|SYC_BURCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|115282152|gb|ABI87669.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 465
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 340/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDI+DKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIEDKIIRRAVENGETIKSLTDRFIGAMHEDEAALGIQRPDLEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLETNGYAYQ----AADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPPGATWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA IN+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEINRTRDASLARQLKQLAGLLGLLGREPRAFLQQATGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL++ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGSTEWRRV 465
>gi|344167043|emb|CCA79234.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [blood disease
bacterium R229]
Length = 465
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/472 (55%), Positives = 341/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII + +N E+I LT+RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRSVENGETIGALTNRFIAAMHEDADTLGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YG+LSG+ + + N+
Sbjct: 121 PQMLSMIGRLQDNGLAYQ----AADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P + D NEPH KRF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADAR-PDWNEPHGKRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA+ +NK +S +A QL L +GLL FL+ +
Sbjct: 356 DFNTPVAMAALFELASEVNKTRSPALASQLVALAGVMGLLGRDPHAFLQGGVGA---AAD 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDAAEVEARIEARRAAKAARDFARADSIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|172061028|ref|YP_001808680.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|229558620|sp|B1YSM8.1|SYC_BURA4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171993545|gb|ACB64464.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 465
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 339/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRALENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLETNGYAYQ----AADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVQPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTCDASLARQLKQLAGLLGLLGREPRAFLQQATGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL++ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGSTEWRRV 465
>gi|309781263|ref|ZP_07676000.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
gi|404393825|ref|ZP_10985629.1| cysteinyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
gi|308920084|gb|EFP65744.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
gi|348615635|gb|EGY65146.1| cysteinyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
Length = 463
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 337/472 (71%), Gaps = 11/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E++ LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETMSALTGRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLSMIGRLQTNGLAYQ----ATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E RW S WG GRPGWHIECSAMSC LLG HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N++KMSKS GNF TIRD+LK Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKLYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P K D NE H KRF+ AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAK-PDWNESHGKRFLEAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +NK +S +A QL L LGLL FL+ + +
Sbjct: 356 DFNTPVAVSVLFELASEVNKTRSPALASQLAALAGVLGLLGRDPHAFLQGGVSPD----- 410
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 411 GLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGGVTEWRR 462
>gi|402566136|ref|YP_006615481.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247333|gb|AFQ47787.1| cysteinyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 465
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/473 (56%), Positives = 338/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 FRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDEAALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLETNGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEP+A+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLA--LDWNEPYAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQGTGAAQAGGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ K++ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 AADE--IEAKIAARVAAKQAKDYAEADRIRAELLEVGIALEDKPGGSTEWRRV 465
>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|109894888|sp|Q2SX78.1|SYC_BURTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 465
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/474 (56%), Positives = 340/474 (71%), Gaps = 11/474 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P PG+V +YVCGIT YDYCH+GHAR+++VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I++LT RFI A D L ++ PD +P AT++I
Sbjct: 61 YRVTYVRNITDIDDKIIRRALENGETIQSLTRRFIDAMNADFDALGVERPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
PQ+L MIEKL NG AYQ +G DVNYSVR F NYGKLSG+ + ++ K+
Sbjct: 121 PQMLGMIEKLEANGYAYQAKDG----DVNYSVRKFANYGKLSGKSLEDLRAGERVAAKDA 176
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K DPLDF LWK +K +P W SK+GAGRPGWHIECSAM C LLG HFDIHGGGQDL
Sbjct: 177 -KDDPLDFVLWKRAKPEEPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDL 235
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA FVNYWMH+GFV+++++KMSKS GNF TIR++L+KY+ EV+R
Sbjct: 236 QFPHHENEIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKYDAEVVR 295
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FFI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D +E HA+RF AMN
Sbjct: 296 FFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDV--TPDAAPLDWSEAHAQRFAAAMN 353
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNT VA+++LF+LA +N+ + +A+QL+ L LGLL EFL+ R
Sbjct: 354 DDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGLLGLLGREPREFLQQAAGAARTGA 413
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ +I R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 414 LEPDE--IEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|421476606|ref|ZP_15924483.1| cysteine--tRNA ligase [Burkholderia multivorans CF2]
gi|400228142|gb|EJO58099.1| cysteine--tRNA ligase [Burkholderia multivorans CF2]
Length = 465
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/473 (57%), Positives = 345/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFIKA ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIKAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R+ A++ K++ EAD+IR EL++ G+ LED P G TEWRR+
Sbjct: 415 SVDE--IEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGSTEWRRV 465
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/473 (54%), Positives = 337/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ PG V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 15 MESLRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 74
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI+A ED+ L I PD +P AT++I
Sbjct: 75 YQVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIQALHEDADALGIARPDMEPRATDFI 134
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL G AYQ +G DVNY+VR F YGKLSG+ + + N+
Sbjct: 135 PQMLGMIEKLEEKGYAYQAKDG----DVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 190
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK ++P + W+S++G GRPGWHIECSAM C LLG FDIHGGGQDL+
Sbjct: 191 KEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQDLQ 250
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYWMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 251 FPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 310
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ +D NE HA+RF AMND
Sbjct: 311 FIARAHYRSPLNYSDVHIDDARNALGRLYTALKDVTPDG--AALDWNEAHAQRFQAAMND 368
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG LGLL +L+ + +
Sbjct: 369 DFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVQGAL 428
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ I+ KI R A++ K++ AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 429 EPAA--IEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGGLTEWRRV 479
>gi|416923169|ref|ZP_11932763.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
gi|325526735|gb|EGD04251.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 465
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/473 (56%), Positives = 339/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P G+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A D L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIDAMHADEDALGIQRPDIEPRATLFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ ++G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLEANGYAYQASDG----DVNYSVRKFRNYGKLSGKSLDDLRAGERVASNDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ +I R A++ K++ EAD+IR EL+ G+ LED P G TEWRR+
Sbjct: 415 AADE--IEARIAARVAAKQAKDYAEADRIRAELLEAGVALEDKPGGSTEWRRV 465
>gi|161524376|ref|YP_001579388.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189350869|ref|YP_001946497.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|229558623|sp|A9AHN6.1|SYC_BURM1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160341805|gb|ABX14891.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189334891|dbj|BAG43961.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
Length = 465
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 344/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIDAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R+ A++ K++ EAD+IR EL++ G+ LED P G TEWRR+
Sbjct: 415 SVDE--IEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGSTEWRRV 465
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/494 (53%), Positives = 346/494 (70%), Gaps = 31/494 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R KQ F PI P V +YVCG+T YDYCHLGHAR+M+VFD+V RWL+ + YDV
Sbjct: 2 LKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ESI LT RFI A ED+ L +Q PD++P AT Y+PQ+
Sbjct: 62 TYVRNITDIDDKIIKRAAENKESIHALTQRFIDAMHEDADTLGVQRPDHEPRATQYVPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L+M+ +L NGLAYQ +GDVNY+VR F YGKLSG+ + + E + K D
Sbjct: 122 LEMVAQLEQNGLAYQ----AADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVSDKHD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K+ + E++W+SKWG GRPGWH+ECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADLQFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA++ ++VNYWMH+GFV+++N+KMSKS GNF TIR++LKKY+ EV+RFFIL
Sbjct: 238 HENEIAQSEGAHRCQYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFIL 297
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINY--------------------KKI 342
R+HYRS +NYS+++L+ AK +L RLY A+K P + + +
Sbjct: 298 RAHYRSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEFPSPSGRGARGEGV 357
Query: 343 IDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYS 402
ID + PHA RF AM+DDFNTP AI++LFDLAN +N+++S+ A +L+ L LGLL+
Sbjct: 358 IDWDTPHAARFKSAMDDDFNTPEAIAVLFDLANEVNRSQSVTAAAELKTLAGVLGLLQRD 417
Query: 403 SDEFLKNNI---YTERKKNVNYSEN--DIKLKIYFRSEARKRKNFLEADKIRQELVNNGI 457
+FL+ T + S DI I R A+K KNF EAD+IR+EL+ GI
Sbjct: 418 PQDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSKNFAEADRIRKELLGAGI 477
Query: 458 ILEDMPNGKTEWRR 471
+LED P G T WRR
Sbjct: 478 VLEDTPQGTT-WRR 490
>gi|221214717|ref|ZP_03587686.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221165256|gb|EED97733.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
Length = 465
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/473 (56%), Positives = 345/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIDAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ ++ +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRNASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R+ A++ K++ EAD+IR EL++ G+ LED P G TEWRR+
Sbjct: 415 SVDE--IEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGSTEWRRV 465
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/473 (54%), Positives = 340/473 (71%), Gaps = 10/473 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRALG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I +LTSRFI A ED L + P+++P AT+++
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIGSLTSRFIAAMHEDLDALGVARPEHEPRATDFV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ ++G DVNY+VR F NYG+LSG+ + + N+
Sbjct: 121 PQMLGMIETLEANGYAYQASDG----DVNYAVRKFANYGRLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++++KMSKS GNF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLARYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYSE++L+ A+ SL RLY A+KD+ +D +EPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSEVHLDDARASLTRLYTALKDVTPD--AAPLDRDEPHARRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNT +A+S+LF+LA +N+ + +A+QL+ LG LGLL +L+ +
Sbjct: 355 DFNTALAVSVLFELAGEVNRTREPALARQLKQLGGLLGLLGREPRAYLQQ---ASGAASG 411
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ +I R A++ KN+ EAD+IR L+ G+ LED P G TEWRR+
Sbjct: 412 ALEAGAIEAQIAARVAAKQAKNYAEADRIRAALLEAGVALEDKPGGLTEWRRV 464
>gi|385209049|ref|ZP_10035917.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
gi|385181387|gb|EIF30663.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
Length = 465
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/473 (55%), Positives = 344/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+IK+LT RFIKA ED+ L IQ PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIKALHEDADALGIQRPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ ++G DVNY+VR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQASDG----DVNYAVRKFANYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVN+WMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ + +D NE +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAE--LDWNEAYAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +N+ + +A+QLR LG +GLL +L+ T +
Sbjct: 355 DFNTPVAVSVLFELASEVNRTRDSALARQLRSLGAVIGLLGREPRAYLQQAAGTAAVGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + KI R+ A++ K+F AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 415 EAAAI--EAKIAARAAAKQSKDFAAADRIRSELLEAGVALEDKPGGLTEWRRV 465
>gi|221198382|ref|ZP_03571428.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221208941|ref|ZP_03581938.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221171224|gb|EEE03674.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221182314|gb|EEE14715.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
Length = 465
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/473 (56%), Positives = 344/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIDAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D +EPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWSEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R+ A++ K++ EAD+IR EL++ G+ LED P G TEWRR+
Sbjct: 415 SVDE--IEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGSTEWRRV 465
>gi|421467267|ref|ZP_15915903.1| cysteine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
gi|400233846|gb|EJO63354.1| cysteine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
Length = 465
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/473 (56%), Positives = 343/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIDAMHEDEDALGIQRPDIEPRATQFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ +GDVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQ----ATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +DP W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVMRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD+ +D EPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALA--LDWREPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVAI+ LF+LA +N+ + +A+QL+ L LGLL FL+ + +
Sbjct: 355 DFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ E I+ KI R+ A++ K++ EAD+IR EL++ G+ LED P G TEWRR+
Sbjct: 415 SVDE--IEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGSTEWRRV 465
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/484 (54%), Positives = 342/484 (70%), Gaps = 26/484 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+KQ F PI GKV +YVCG+T YD+CHLGHAR+++VFD V RWLR + DV
Sbjct: 2 LKIYNTIAREKQEFVPIEAGKVKMYVCGMTVYDFCHLGHARVLVVFDAVYRWLRASGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q P ++P AT Y+PQ+
Sbjct: 62 TYVRNITDIDDKIIRRAVENGETIGQLTDRFIAAMDEDAAALGVQKPTHEPRATEYVPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L +I +L NGLAY+ +GDVN+SVR F YG+LSG+ + + E ++ K+D
Sbjct: 122 LGLIGQLEANGLAYK----AADGDVNFSVRKFPGYGRLSGKSLDDLRAGERVEVDSAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WGAGRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKHAKAGEPA---WESPWGAGRPGWHIECSAMSSDLLGKHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ FVNYWMH+GFV+++++KMSKS GNF TIRD+LKKY+ EV+RFFIL
Sbjct: 235 HENEIAQSEGAHGCTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLKKYDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L+ A+++L RLY A+K P +D NE HA+RF AM+DDFN
Sbjct: 295 RAHYRSPLNYSDAHLDDARQALTRLYTALKAAPA--EAVAVDWNEAHAQRFQAAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN-IYTERKKNVNY 421
TP A+++LFDLAN N++K +A QL+ L LGLL S +++LK +Y ++
Sbjct: 353 TPEALAVLFDLANEANRSKDSAVAAQLKALAGVLGLLARSPEDYLKGRVVYGSGNATMSL 412
Query: 422 --------------SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
SE+DI+ +I R +A+K KNF EAD++R EL+ GI+LED G T
Sbjct: 413 SGNGEGTLLVGGGISESDIEARIQARIDAKKAKNFAEADRLRAELLAAGIVLEDSAQGTT 472
Query: 468 EWRR 471
WRR
Sbjct: 473 -WRR 475
>gi|186476148|ref|YP_001857618.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|184192607|gb|ACC70572.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 465
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/473 (56%), Positives = 346/473 (73%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G+V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED+ L I+ PD +P AT ++
Sbjct: 61 YKVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAALHEDADALGIERPDLEPRATEFV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +GDVNY+VR F NYG LSG+ + + N+
Sbjct: 121 PQMLGMIEKLEANGYAYQ----AADGDVNYAVRKFENYGALSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK ++P + W SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQSKPDEPADTGWESKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA + FVNYWMH+G+V+I+N+KMSKS GNF TIR++L KY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATRQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLAKYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++L+ A+ +L RLY A+KD P + +D NE +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHLDDARGALARLYTALKDTPPQAGE--VDWNEAYAQRFRAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+L + +N+ + +A+QL GLG LGLL +L+ + + +
Sbjct: 355 DFNTPVAVSVLFELVSEVNRTRDAALARQLHGLGLVLGLLGREPRVYLQQAGASVGEGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ KI R A++ K++ EAD+IR+EL++ GI LED P G TEWRR+
Sbjct: 415 DTAA--IEAKIAARVAAKQAKDYAEADRIRKELLDAGIALEDKPGGLTEWRRV 465
>gi|53719852|ref|YP_108838.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|53723757|ref|YP_103282.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|67642953|ref|ZP_00441703.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|76809388|ref|YP_334067.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121599658|ref|YP_993471.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124385862|ref|YP_001029097.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126441734|ref|YP_001059571.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|126449503|ref|YP_001080979.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|126452065|ref|YP_001066849.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|134277835|ref|ZP_01764550.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|167001797|ref|ZP_02267589.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|167720284|ref|ZP_02403520.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei DM98]
gi|167739281|ref|ZP_02412055.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 14]
gi|167816497|ref|ZP_02448177.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 91]
gi|167830172|ref|ZP_02461643.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 9]
gi|167846407|ref|ZP_02471915.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|167894988|ref|ZP_02482390.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|167903372|ref|ZP_02490577.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167916840|ref|ZP_02503931.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 112]
gi|167919625|ref|ZP_02506716.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|217420917|ref|ZP_03452422.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|226198973|ref|ZP_03794536.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237812906|ref|YP_002897357.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei MSHR346]
gi|242315930|ref|ZP_04814946.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254178125|ref|ZP_04884780.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254184417|ref|ZP_04891007.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|254191450|ref|ZP_04897954.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254197349|ref|ZP_04903771.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|254200234|ref|ZP_04906600.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254209314|ref|ZP_04915660.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|254258938|ref|ZP_04949992.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|254297083|ref|ZP_04964536.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|254358017|ref|ZP_04974290.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|386861244|ref|YP_006274193.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403519278|ref|YP_006653412.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
gi|418382652|ref|ZP_12966590.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|418538402|ref|ZP_13104011.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|418540456|ref|ZP_13105995.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
gi|418546705|ref|ZP_13111902.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|418552948|ref|ZP_13117791.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|61216158|sp|Q62J37.1|SYC_BURMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216161|sp|Q63SS8.1|SYC_BURPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|109894887|sp|Q3JQT6.1|SYC_BURP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200132|sp|A3ML43.1|SYC_BURM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200133|sp|A2SAX8.1|SYC_BURM9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200134|sp|A1V5G8.1|SYC_BURMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200135|sp|A3NWX8.1|SYC_BURP0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166200136|sp|A3NB50.1|SYC_BURP6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52210266|emb|CAH36245.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|52427180|gb|AAU47773.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|76578841|gb|ABA48316.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121228468|gb|ABM50986.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124293882|gb|ABN03151.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126221227|gb|ABN84733.1| cysteine--tRNA ligase [Burkholderia pseudomallei 668]
gi|126225707|gb|ABN89247.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|126242373|gb|ABO05466.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10247]
gi|134251485|gb|EBA51564.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|147749830|gb|EDK56904.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147750087|gb|EDK57158.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|148027144|gb|EDK85165.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|157807476|gb|EDO84646.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|157939122|gb|EDO94792.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|160699164|gb|EDP89134.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|169654090|gb|EDS86783.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|184214948|gb|EDU11991.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|217396329|gb|EEC36346.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|225929073|gb|EEH25097.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237504389|gb|ACQ96707.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|238524180|gb|EEP87614.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|242139169|gb|EES25571.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|243062482|gb|EES44668.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|254217627|gb|EET07011.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|385347688|gb|EIF54338.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|385361808|gb|EIF67680.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
gi|385363464|gb|EIF69238.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|385372357|gb|EIF77475.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|385377132|gb|EIF81748.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|385658372|gb|AFI65795.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403074921|gb|AFR16501.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
Length = 465
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 340/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P PG+V +YVCGIT YDYCH+GHAR+++VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRARG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I++LT RF A D L ++ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIQSLTRRFTDAMNADFDALGVERPDLEPRATEFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +G DVNYSVR F NYG+LSG+ + + N+
Sbjct: 121 PQMLGMIEKLEANGYAYQAKDG----DVNYSVRKFANYGRLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W SK+GAGRPGWHIECSAM C LLG+HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPQEPAGASWESKYGAGRPGWHIECSAMGCTLLGAHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++++KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD + +D +E HA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKD--ATPDAQPLDWSEAHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNT VA+++LF+LA +N+ + +A+QLR L LGLL EFL++ R +
Sbjct: 355 DFNTAVAVAVLFELATEVNRTREPALARQLRLLAGLLGLLGREPREFLQHAAGAARTGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ +I R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 EPHE--IEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|350545604|ref|ZP_08915076.1| Cysteinyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526661|emb|CCD39993.1| Cysteinyl-tRNA synthetase [Candidatus Burkholderia kirkii UZHbot1]
Length = 465
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 344/473 (72%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M++LRIYN+ +R KQ F P+ G+V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MNSLRIYNTLARDKQTFTPLRAGEVRMYVCGMTVYDYCHIGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +NNE IK+LT RFI+A ED+ L + PPD +P AT +I
Sbjct: 61 YKVTYVRNITDIDDKIIRRAVENNEPIKSLTHRFIQAMHEDADALGVAPPDIEPHATEFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI+ L NG AY +G DVNY+VR F +YG+LSG+ + + N+
Sbjct: 121 PQMLGMIDALQANGYAYHAKDG----DVNYAVRKFADYGRLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P + W+SKWG GRPGWHIECSAM C LLG FDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKQAKADEPADSGWDSKWGRGRPGWHIECSAMGCALLGEQFDIHGGGMDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +FVNYWMH+GFV+I+++KMSKS GNF TIR++L+K++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGKRFVNYWMHNGFVQIDSEKMSKSLGNFLTIREVLEKFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ AK L RLY A+KD+ N + +D NE +RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDAKNGLTRLYTALKDVKPDN--QPLDWNEADVQRFQSAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LFDLA+ +N+ + +A+QL+GL LGLL FL+ T ++ +
Sbjct: 355 DFNTPVAVSVLFDLASEVNRTRDAALARQLKGLAGVLGLLGREPRIFLQQAAGTGAEQGL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 WPQE--IEAKIAERIAAKQAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|330817521|ref|YP_004361226.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327369914|gb|AEA61270.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 464
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/473 (55%), Positives = 339/473 (71%), Gaps = 10/473 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMMVVFDIVQRWLRQLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I LTSRFI A ED L ++ PD++P AT+YI
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIGELTSRFIAAMHEDLDALGVERPDHEPRATHYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI L NG AYQ +G DVNY+VR F NYG+LSG+ + + N+
Sbjct: 121 PQMLGMIAALEANGYAYQAKDG----DVNYAVRKFANYGRLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + W+SK+G GRPGWHIECSAM C LLG+HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKRAKPEEPADTSWDSKYGRGRPGWHIECSAMGCTLLGNHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV+++++KMSKS GNF TIR++L+KY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGETFVNTWMHNGFVQVDSEKMSKSLGNFFTIREVLEKYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYSE++L+ A+ +L RLY A+KD+ +D +EPHA+RF AMND
Sbjct: 297 FIARTHYRSPLNYSEVHLDDARAALTRLYTALKDVTPDGAP--LDPDEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNT +A+S+LF+LA +N+ + +A+Q + LG LGLL + FL+ T +
Sbjct: 355 DFNTALAVSVLFELAGEVNRTRDAALARQFKQLGALLGLLGRDARAFLQQA--TGAGADA 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ I R A++ KN+ EAD+IR L+ G+ LED P G TEWRR+
Sbjct: 413 LDGEA-IEACIAERVAAKQAKNYAEADRIRAALLEAGVALEDKPGGLTEWRRV 464
>gi|167563301|ref|ZP_02356217.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis EO147]
gi|167570473|ref|ZP_02363347.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis C6786]
Length = 465
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/473 (56%), Positives = 339/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDLVQRWLRAIG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+I++LTSRF A D L ++ PD +P AT +I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIRSLTSRFTDAMNADFDALGVERPDIEPRATEFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIEKL NG AYQ +G DVNYSVR F YGKLSG+ + + N+
Sbjct: 121 PQMLGMIEKLEANGYAYQAKDG----DVNYSVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEEPVGASWDSKYGLGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV+++++KMSKS GNF TIR++L+ ++ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLENFDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ SL RLY A+KD + +D NE HA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDSAP--LDWNEAHARRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LF+LA +N+ + +A+QL L LGLL EFL+ T R +
Sbjct: 355 DFNTPVAVAVLFELATEVNRTRDPALARQLGRLAGLLGLLGREPREFLQQAAGTPRAGAL 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
E I+ KI R A++ KN+ EAD+IR EL+ GI LED P G TEWRR+
Sbjct: 415 EPEE--IEAKIAARVAAKRAKNYAEADRIRAELLEAGIALEDKPGGSTEWRRV 465
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/473 (56%), Positives = 333/473 (70%), Gaps = 16/473 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+KQ F PI GKVS+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + Y+V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGYNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TDIDDKII A +NNE+I LT RFI A EDS L + PD +P AT ++ +
Sbjct: 62 TYVRNVTDIDDKIIKRANENNETIAQLTQRFIDAMDEDSAKLGVLRPDLEPKATEFVDGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI LI G AY NGDV YSV +F YGKLSG+ + + E ++FKKD
Sbjct: 122 LSMIAALIDKGFAYP----AANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDSFKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E W S WG GRPGWHIECSAMS + LG HFDIHGGGQDL+FPH
Sbjct: 178 PMDFVLWKAAK---PGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKH-----KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
HENEIAQSE A+ H + VNYWMH+GFV+++++KMSKS GNF TIR +L++Y+ EVI
Sbjct: 235 HENEIAQSEAAHSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEQYDAEVI 294
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAM 357
RFFILR+HYRS +NYS+ +LN AK +L RLY A++ + + ID P+A RF +AM
Sbjct: 295 RFFILRAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSD--DAIDWQHPYAARFKLAM 352
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
+DDFNTP A+++LFDLAN +NK KS + A L+GL + LGLL SDEFL+
Sbjct: 353 DDDFNTPEAMAVLFDLANEVNKTKSTEAAGLLKGLASVLGLLSRKSDEFLQAKTNANGAA 412
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
N +E D+ I R EA++ KNF EAD+IR+EL GIILED P G T WR
Sbjct: 413 NDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAGIILEDTPQGTT-WR 464
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/476 (54%), Positives = 337/476 (70%), Gaps = 19/476 (3%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ F PI GKV +YVCG+T YDYCH+GHAR+M+ FD++ RWL +
Sbjct: 1 MSNLKIYNTLARDKQTFVPIEAGKVRMYVCGMTIYDYCHIGHARMMMAFDVMYRWLLASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTY RNITDIDDKII A +N E+I LT+RF + ED+ L I P P AT Y+
Sbjct: 61 YEVTYARNITDIDDKIIKRAVENGETISQLTTRFTQYMDEDTGALGILPATLVPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +IE L LAYQ ++G DVNY+VRNF NYG+LSG+ + + + N
Sbjct: 121 PQMLALIETLESKDLAYQGSDG----DVNYAVRNFPNYGRLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK ++P E++W+SKWG GRPGWHIECSAM LLG HFDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKASKESEPDEVKWDSKWGKGRPGWHIECSAMCSALLGEHFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ VNYW+H+GFV+++N+KMSKS GNF TIRD+LKKY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGAFGRTMVNYWVHNGFVRVDNEKMSKSLGNFFTIRDVLKKYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+ + +D EPHA RF AM+D
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARVALTRLYTALDGVEGDGLA--LDWQEPHAARFAEAMDD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+++LFDL + +NK+KS +A+QL+ L +GLL + EF R+ V
Sbjct: 355 DFNTPVALAVLFDLVSELNKSKSPAVARQLKALAGVIGLLARTPQEF--------RQAAV 406
Query: 420 NYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ D I +I R EA+K +NF E+DKIR +L+ GIILED P+G T WRR
Sbjct: 407 GETDTDGDAAIAARIAQRIEAKKARNFAESDKIRADLLTAGIILEDKPDGTTNWRR 462
>gi|312796649|ref|YP_004029571.1| cysteinyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
gi|312168424|emb|CBW75427.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Burkholderia rhizoxinica
HKI 454]
Length = 483
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 334/474 (70%), Gaps = 10/474 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M LR+YN+ SR K+ F P+ G+V +YVCG+T YDYCH+GH RLM+VFD++QRWLR
Sbjct: 18 MDQLRLYNTLSRNKETFVPLHDGEVRMYVCGMTVYDYCHVGHGRLMVVFDMIQRWLRTLG 77
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A N E I+ LT RFI A ED L+IQ PD++P AT +I
Sbjct: 78 YRVTYVRNITDIDDKIIRRAVDNGEPIRALTERFIAAMHEDEAALNIQRPDHEPRATQFI 137
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
Q+L MI+ L NG AY +G DVNYSVR F YG+LSG+ + + +N+
Sbjct: 138 SQMLGMIDALERNGYAYSGRDG----DVNYSVRKFAAYGQLSGKSLEDLRAGERVTQNDA 193
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK+ +P + W+SKWG GRPGWHIECSAMSC LLG FDIHGGGQDL+
Sbjct: 194 KEDPLDFVLWKRSKDGEPPDTGWDSKWGRGRPGWHIECSAMSCALLGERFDIHGGGQDLQ 253
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEG FVNYW+H+GFV ++N+KMSKS GNF T+RD+L++Y+ EVIR
Sbjct: 254 FPHHENEIAQSEGVTGQPFVNYWLHNGFVNVDNEKMSKSLGNFFTLRDVLQRYDGEVIRM 313
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
ILR+HYRS +NYS+ +L+ A+ +L RLY A+K++ + + +D +E HA F AMND
Sbjct: 314 LILRAHYRSPLNYSDSHLDDARAALTRLYTALKNVAPDD--RALDWSERHAAAFRAAMND 371
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNI-YTERKKN 418
DFNTPVA + LFDL +N+ +A+QL+GL LG+L E+L+ T+
Sbjct: 372 DFNTPVAFAALFDLVTDLNRTGDPALARQLKGLAGVLGMLGRDPREYLQARAPATDELAP 431
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
++ ++ I +I R++A++ KN+ EAD+IR L+ G++LED P GKTEWRR+
Sbjct: 432 LDAAQ--IDEQIEARAQAKRAKNYAEADRIRAALLEAGVVLEDKPGGKTEWRRV 483
>gi|302879529|ref|YP_003848093.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
gi|302582318|gb|ADL56329.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
Length = 456
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/470 (55%), Positives = 338/470 (71%), Gaps = 16/470 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R KQ F PI P V +YVCG+T YDYCHLGHAR+M+VFD+V RW + + YDV
Sbjct: 2 LKIYNTLARDKQEFVPIEPNVVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWFKASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +NNESI +LT RFI A D+ L + PD++P AT Y+P++
Sbjct: 62 TYVRNITDIDDKIIRRAAENNESIHSLTQRFIDAMHVDADALGVTRPDHEPRATQYVPEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L+MI KL NGLAYQ +GDVNY+VR F YGKLSG+ + + E + K D
Sbjct: 122 LEMIAKLEANGLAYQ----AADGDVNYAVRKFEGYGKLSGKSLEDLRAGERVEVTDAKND 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +++++ E++W+SKWG GRPGWHIECSAM LLG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKHARDDEAEEVKWDSKWGRGRPGWHIECSAMGSKLLGEHFDIHGGGADLQFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA++ +VNYWMH+GFV+++N+KMSKS GNF TIR++LK+Y+PEV+RFFIL
Sbjct: 238 HENEIAQSEGAHQCSYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKQYDPEVVRFFIL 297
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L+ AKK+L RLY A+K + + +D E +A RF AM+DDFN
Sbjct: 298 RAHYRSPLNYSDAHLDDAKKALDRLYTALKS-GSASGVRAVDWTEAYAVRFKAAMDDDFN 356
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
T AI++LFDLAN +N+++S A QL+ LG LGLLE EFL +
Sbjct: 357 TAEAIAVLFDLANDVNRSQSEDAAAQLKALGAVLGLLERDPTEFL---------QGAGSD 407
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ I +I R+ A+ KN+ EAD+IR+ L+ +GI+LED G T WRR+
Sbjct: 408 DAQIVGQIAARNAAKLAKNYAEADRIRKALLADGIVLEDSAAG-TNWRRV 456
>gi|344174361|emb|CCA86152.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia syzygii
R24]
Length = 465
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/472 (55%), Positives = 340/472 (72%), Gaps = 9/472 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +L+IYN+ +R+KQ F PI PG+V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR +
Sbjct: 1 MESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT+RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRAVENGETIGALTNRFIAAMHEDADALGVQRPDHEPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L NGLAYQ +GDVNY+VR F YG+LSG+ + + N+
Sbjct: 121 PQMLSMIGRLQDNGLAYQ----AADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E RW S WG GRPGWHIECSAMSC LLG+HFD+HGGG DL+
Sbjct: 177 KQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQ+EGA + FVN WMH+GFV++N++KMSKS GNF TIR++LK Y+PEV+RF
Sbjct: 237 FPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVYDPEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILRSHYRS +NYS+ +L+ A+ +L RLY A+KD+P + D NEPH KRF AMND
Sbjct: 297 FILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADAR-PDWNEPHGKRFREAMND 355
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA++ LF+LA+ +NK + +A QL L +GLL FL+ +
Sbjct: 356 DFNTPVAMAALFELASEVNKTRLPALASQLAALAGVMGLLGRDPHAFLQGGVGA---AAD 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ +I R A+ ++F AD IR +L+ GI+LED P G TEWRR
Sbjct: 413 GLDAAEVEARIEARRAAKAARDFARADSIRADLLAAGIVLEDKPGGVTEWRR 464
>gi|348618232|ref|ZP_08884762.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816479|emb|CCD29465.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 474
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/468 (53%), Positives = 327/468 (69%), Gaps = 13/468 (2%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+KQ F P PG+V LYVCGIT YDYCH+GH R+++ FD+VQRWLR Y V Y
Sbjct: 9 IYNTLAREKQPFVPFRPGEVRLYVCGITVYDYCHIGHGRMLVAFDVVQRWLRALGYRVLY 68
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKII A +N E I LT RFI+A ED+ L ++ PD +P AT Y+PQ+L
Sbjct: 69 VRNITDIDDKIIRRAVENGERIAALTERFIRAMHEDADALGVERPDIEPRATAYVPQMLD 128
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKKDP 183
+I L NG AYQ +GDVNY+VR F +YG+LSG+ + +I N K DP
Sbjct: 129 LIAALEKNGYAYQ----AADGDVNYAVRKFASYGRLSGKTLDDLRRAERI-AGNEAKGDP 183
Query: 184 LDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHH 243
LDFALWK +K +P E W S+WG GRPGWHIECSAMS LLG FDIHGGG DL+FPHH
Sbjct: 184 LDFALWKRAKPGEPPEAVWESRWGRGRPGWHIECSAMSTALLGERFDIHGGGLDLQFPHH 243
Query: 244 ENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILR 303
ENEIAQSEGA FV++WMH+G V + ++KMSKS GNFCTIRD +++ E +RFFI+R
Sbjct: 244 ENEIAQSEGATGQPFVHHWMHNGHVHVGDEKMSKSLGNFCTIRDAFARFDAETVRFFIVR 303
Query: 304 SHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNT 363
+HYRS ++YS +L A ++L RLY A+K+ P + +D EPHA+RF AMNDDFNT
Sbjct: 304 AHYRSPLHYSPAHLEDAHRALTRLYTALKESPPD--AEALDWQEPHAQRFRDAMNDDFNT 361
Query: 364 PVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSE 423
P A+++LFDLA +N++++ +A+QL+GL LGLL S FL+ + + N++
Sbjct: 362 PEAVAVLFDLAGAVNRSRNALLARQLKGLAGTLGLLTRSPHAFLRGDQSGGAELNIHM-- 419
Query: 424 NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I +I R A++ KN++EAD+IR EL+ G+ILED P+G TEWRR
Sbjct: 420 --INARIEARRLAKRAKNYIEADRIRAELLEQGVILEDRPDGSTEWRR 465
>gi|209518045|ref|ZP_03266876.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
gi|209501549|gb|EEA01574.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
Length = 476
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 337/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFD+VQRWLR
Sbjct: 12 MESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDVVQRWLRTLG 71
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E+IK+LT RFI A ED+ L I PD +P AT++I
Sbjct: 72 YNVTYVRNITDIDDKIIKRAVENGETIKSLTDRFIAALHEDADALGIARPDIEPRATDFI 131
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ ++G DVNY+VR F YGKLSG+ + + N+
Sbjct: 132 PQMLGMIETLEKNGYAYQASDG----DVNYAVRKFEGYGKLSGKSLEDLRAGERVAANDA 187
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + W+SK+G GRPGWHIECSAM C LLG FDIHGGGQDL+
Sbjct: 188 KQDPLDFVLWKQAKPEEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQDLQ 247
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYWMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 248 FPHHENEIAQSEAATGQTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 307
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ +D NE +A+RF AMND
Sbjct: 308 FIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDT--AALDWNEAYAQRFQTAMND 365
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG LGLL +L++ + +
Sbjct: 366 DFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQHAAGAAAEGAL 425
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ KI R A++ K++ AD+IR EL++ G+ LED P G TEWRR+
Sbjct: 426 --EPAAIEAKIAARIAAKQAKDYAAADRIRAELLDAGVALEDKPGGLTEWRRV 476
>gi|91784175|ref|YP_559381.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|123358667|sp|Q13X60.1|SYC_BURXL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91688129|gb|ABE31329.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 465
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/473 (54%), Positives = 339/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E+IK+LT RFIKA ED+ L IQ PD +P AT++I
Sbjct: 61 YNVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIKALHEDADALGIQRPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE+L NG AYQ ++G DVNY+VR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIERLEANGYAYQASDG----DVNYAVRKFANYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + W+SK+G GRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQAKPQEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVN+WMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ + +D NE +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAE--LDWNEAYAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA+ +N+ + +A+QLR LG +GLL +
Sbjct: 355 DFNTPVAVSVLFELASEVNRTRDPALARQLRLLGAVIGLL--GREPRAYLQQAAGAAAVG 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ KI R+ A++ K+F AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 413 ALEAAAIEAKIAARAAAKQAKDFAAADRIRSELLEAGVALEDKPGGLTEWRRV 465
>gi|295676873|ref|YP_003605397.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436716|gb|ADG15886.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 465
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/473 (54%), Positives = 336/473 (71%), Gaps = 9/473 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ F P+ G V +YVCG+T YDYCH+GHAR+M+VFDIVQRWLR
Sbjct: 1 MESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRALG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A +N E+IK+LT RFI A ED+ L I+ PD +P AT++I
Sbjct: 61 YNVTYVRNITDIDDKIIKRAVENGETIKSLTDRFIAALHEDADALGIERPDIEPRATDFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ ++G DVNY+VR F YGKLSG+ + + N+
Sbjct: 121 PQMLGMIEALEKNGYAYQASDG----DVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P + W+SK+G GRPGWHIECSAM C LLG FDIHGGGQDL+
Sbjct: 177 KQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYWMH+G+V+I+N+KMSKS NF TIR++L +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEAATGQTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI R+HYRS +NYS+++++ A+ +L RLY A+KD+ + +D NE +A+RF AMND
Sbjct: 297 FIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDS--AALDWNEAYAQRFQAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF+LA +N+ + +A+QLR LG LGLL +L+
Sbjct: 355 DFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQQAAGA--AAEG 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ KI R A++ K++ AD+IR EL+ G+ LED P G TEWRR+
Sbjct: 413 ALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLEAGVALEDKPGGLTEWRRV 465
>gi|334129555|ref|ZP_08503359.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
gi|333445240|gb|EGK73182.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
Length = 459
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/471 (53%), Positives = 333/471 (70%), Gaps = 17/471 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+KQ F PI PG+V +YVCG+T YD+CHLGHAR+M+VFD+V RWLR ++Y V
Sbjct: 2 LKIYNTLAREKQDFVPIEPGRVRMYVCGMTVYDFCHLGHARVMVVFDMVTRWLRASDYTV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+++ LT RFI A ED+ L + PD++P AT ++PQ+
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETMRALTDRFIAAMHEDADALGVLRPDHEPRATEFVPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---K 180
+I++L GLAY+ +GDVNYSVR F YGKLSG+ S + + E+ + K
Sbjct: 122 QTLIQRLEAKGLAYR----AASGDVNYSVRKFDGYGKLSGK--SLDDLRAGERVDVIDDK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P E +W S WG GRPGWHIECSAMS LLG FDIHGGG DL+F
Sbjct: 176 QDPLDFVLWKHAKPAEPAEAKWASPWGDGRPGWHIECSAMSSQLLGDRFDIHGGGADLQF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ H FVNYWMH+GFV+++++KMSKS GNF TIR++L+KY+PEV+RFF
Sbjct: 236 PHHENEIAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFF 295
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
ILR+HYRS +NYS+ +L+ A+ +L RLY +K++P + D N P RF AM+DD
Sbjct: 296 ILRAHYRSPLNYSDAHLDDARGALTRLYTTLKNVPPAACQP--DWNTPAGSRFRAAMDDD 353
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNT A+++LF+L+N N+ +A +LR L LGLLE S ++FLK R +
Sbjct: 354 FNTAEALAVLFELSNEANRGNDAAVAGELRALAGVLGLLERSPEDFLKG-----RAQAGG 408
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R A+K ++F AD++R EL GIILED G T WRR
Sbjct: 409 LDDAQIEALIAQRVAAKKARDFATADRVRDELKQQGIILEDSAAGTT-WRR 458
>gi|427403812|ref|ZP_18894694.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
gi|425717481|gb|EKU80439.1| cysteinyl-tRNA synthetase [Massilia timonae CCUG 45783]
Length = 464
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/473 (53%), Positives = 334/473 (70%), Gaps = 12/473 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ+F P GKV +YVCG+T YDYCH+GHAR+M+ FD+V RWL +
Sbjct: 1 MSQLKIYNTLARDKQVFVPKVAGKVGMYVCGMTVYDYCHVGHARMMMAFDVVYRWLMASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V YVRNITDIDDKII A +N E+I LT RF K ED+ L I PP P AT Y+
Sbjct: 61 YEVNYVRNITDIDDKIIRRAVENGETIGALTKRFEKYMDEDTDALGILPPTVVPRATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
P +L +IEKL GLAYQ +G DVNY+VR F YGKLSG+ + +++ K
Sbjct: 121 PHMLSIIEKLEQKGLAYQTEDG----DVNYAVRGFDGYGKLSGKSLDDLRAGERVDVKTA 176
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K ++P E +W+S+WG GRPGWHIECSAMSC LG HFDIHGGG DL
Sbjct: 177 -KRDPLDFVLWKAAKESEPLEAKWDSQWGRGRPGWHIECSAMSCATLGEHFDIHGGGADL 235
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA+ VNYW+H+GFV+++N+KMSKS GNF TIR++L KY+ EV+R
Sbjct: 236 QFPHHENEIAQSEGAFGGPMVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLAKYDAEVVR 295
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FFILR+HYRS +NYS+++++ A+ +L RLY A+ D+ + + +D +E HAKRF AM+
Sbjct: 296 FFILRAHYRSPLNYSDVHIDDARGALTRLYTALADVDLGDGELAVDWDEAHAKRFRDAMD 355
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTP+A++ LFDLA+ +N+ KS++ A+QL+ L LGLLE + FL+ +
Sbjct: 356 DDFNTPLAVAELFDLASEVNRGKSVETARQLKALAAVLGLLERAPQAFLQAGT----PGS 411
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E I I R+ A+ ++F +AD IR+EL GI+LED +G T WRR
Sbjct: 412 GGLDEAAILDAIARRAAAKAARDFAQADAIRKELTAAGIVLEDKADGTT-WRR 463
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/480 (53%), Positives = 326/480 (67%), Gaps = 21/480 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR KQ+F PI PGKV +YVCG+T YD+CH+GHAR+MIVFD+V RWLR + Y+V
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N+E I LT+RFI A DS L + PD +P AT+YI Q+
Sbjct: 62 QYVRNITDIDDKIIKRALENSEPISALTNRFIAAMHADSDELGLMHPDQEPRATDYIQQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI KLI N LAYQ +GDVN++VR YG+LSG+ + N + K+D
Sbjct: 122 QGMIGKLIENELAYQGE----DGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGGGKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P + RWNS WG GRPGWHIECSAMSC LLG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADLQFPH 237
Query: 243 HENEIAQSEGAY--------KHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP 294
HENEIAQSEGA FVNYWMH+G +++N +KMSKS GNF IRD+LK ++P
Sbjct: 238 HENEIAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDP 297
Query: 295 EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFI 354
EV+RFF+L++HYRS INYS+ L A+ L RLY A+ IP+++ IDL P AKRF
Sbjct: 298 EVVRFFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVP-IDLQNPWAKRFA 356
Query: 355 IAMNDDFNTPVAISILFDLANIINKNKSIK---MAKQLRGLGNWLGLLEYSSDEFLKNNI 411
AMNDDFNTP AI++LFDLA+ +N+ + + +A L+ LG L L+ FL+
Sbjct: 357 DAMNDDFNTPEAIAVLFDLASEVNRAQGAEKQMLAGLLKSLGGTLNFLQRDPTNFLQAG- 415
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K S I+ I R A++ K+F +AD IR+ L+ G++LED P G TEWRR
Sbjct: 416 ---SKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALLEQGVVLEDKPGGITEWRR 472
>gi|358638097|dbj|BAL25394.1| cysteinyl-tRNA synthetase [Azoarcus sp. KH32C]
Length = 437
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/446 (55%), Positives = 321/446 (71%), Gaps = 11/446 (2%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + YD+TYVRNITDIDDKII A++N ES
Sbjct: 1 MYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDLTYVRNITDIDDKIIRRAQENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I+ LT RFI A ED+ L +Q P+++P AT ++PQ+ +I +L GLAY N
Sbjct: 61 IRDLTDRFIAAMHEDADALGVQRPNHEPRATEFVPQMQSLIGRLYDKGLAYVAENR---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV Y+VR F YGKLSG+ + + E K+DPLDF LWK ++ +P E++WNS
Sbjct: 117 DVCYAVRKFEGYGKLSGKTLDELRAGERVEIVGEKRDPLDFVLWKHARVEEPAEVKWNSP 176
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAMS LLG HFDIHGGGQDL+FPHHENE+AQSEGA+ H FVNYWMH+
Sbjct: 177 WGDGRPGWHIECSAMSSQLLGEHFDIHGGGQDLQFPHHENEVAQSEGAHGHAFVNYWMHN 236
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
GFV+++N+KMSKS GNF TIRD+LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ A++SL
Sbjct: 237 GFVRVDNEKMSKSLGNFFTIRDVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDARQSLT 296
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY A++++ +D E HA+RF AM+DDFNT A+++LFDLAN +N+ S
Sbjct: 297 RLYTALRNVKTAGGG--VDWTESHAQRFRAAMDDDFNTAEAVAVLFDLANEVNRTGSEST 354
Query: 386 AKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEA 445
A QL+GL LGLLE FL+ I + + I+ +I R+EA+K +NF EA
Sbjct: 355 AAQLKGLAGVLGLLEREPQVFLQGGIGG---QGGDADTAAIEAQIAQRAEAKKARNFAEA 411
Query: 446 DKIRQELVNNGIILEDMPNGKTEWRR 471
D+IR EL+ G++LED G T WRR
Sbjct: 412 DRIRAELLAQGVVLEDSAQG-TIWRR 436
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/470 (53%), Positives = 329/470 (70%), Gaps = 17/470 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K++F PITPGK S+YVCG+T YDYCHLGHAR+++VFD+V RWLR YD+
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E I+ LT+RFI A ED L + PD++P AT ++P +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ +IE LI NG AY NGDV Y+VR F YGKLSG+ + + E + K+D
Sbjct: 122 IALIETLIANGRAYP----APNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K P E W S WG GRPGWHIECS MS + LG HFDIHGGG DL+FPH
Sbjct: 178 PFDFVLWKAAK---PGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H FVNYW+H+GF++++N+KMSKS GNF TIR++L+KY+ EV+RFFIL
Sbjct: 235 HENEIAQSEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
R+HYRS +NYS+++L+ AK+SL RLY A+K++ + ID E +A+RF AM+DDF
Sbjct: 295 RAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIA--IDWEENDYARRFRQAMDDDF 352
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NT A+++LFDLA +N+ +S A L+ LG LGLL+ + EFL+
Sbjct: 353 NTVEAMAVLFDLAGEVNRGESAAQAGLLKALGAVLGLLQRAPQEFLQGG-----STAAEL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S + I+ I R +AR KN+ E+D+IR EL G+ILED G T WRR
Sbjct: 408 SADAIEALIQARRDARAAKNWAESDRIRDELAAKGVILEDGAQGTT-WRR 456
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/470 (53%), Positives = 329/470 (70%), Gaps = 17/470 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K++F PITPGK S+YVCG+T YDYCHLGHAR+++VFD+V RWLR YD+
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E I+ LT+RFI A ED L + PD++P AT ++P +
Sbjct: 62 TYVRNITDIDDKIIKRAAENGEPIQALTARFIDAMNEDFDALGVIHPDFEPRATEHVPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ +IE LI NG AY NGDV Y+VR F YGKLSG+ + + E + K+D
Sbjct: 122 IALIETLIANGRAYP----APNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDVNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K P E W S WG GRPGWHIECS MS + LG HFDIHGGG DL+FPH
Sbjct: 178 PFDFVLWKAAK---PGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H FVNYW+H+GF++++N+KMSKS GNF TIR++L+KY+ EV+RFFIL
Sbjct: 235 HENEIAQSEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
R+HYRS +NYS+++L+ AK+SL RLY A+K++ + ID E +A+RF AM+DDF
Sbjct: 295 RAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIA--IDWEENDYARRFRQAMDDDF 352
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NT A+++LFDLA +N+ +S A L+ LG LGLL+ + EFL+
Sbjct: 353 NTVEAMAVLFDLAGEVNRGESAAQAGLLKALGAVLGLLQRAPQEFLQGG-----STAAEL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S + I+ I R +AR KN+ E+D+IR EL G+ILED G T WRR
Sbjct: 408 SADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILEDGAQGTT-WRR 456
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/471 (54%), Positives = 329/471 (69%), Gaps = 21/471 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R KQ F PI PGKVS+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + Y+V
Sbjct: 2 LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT RFI A ED+ L + PD +P AT+YI ++
Sbjct: 62 TYVRNITDIDDKIIARANENGETINALTDRFIAAMNEDAARLGVWRPDLEPRATDYIHEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MI LI AY +NG DV Y+V +F +YGKLSG+ + + E + K+D
Sbjct: 122 IAMIVALIEKHHAYAADNG----DVYYAVSSFASYGKLSGKSLEDLRAGERVEVDAHKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E W+S WG GRPGWHIECSAM LG HFDIHGGGQDL+FPH
Sbjct: 178 PMDFVLWKAAK---PGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ FVNYWMH+GF++++++KMSKS GNF TIR++L+KY+ EV+RFFIL
Sbjct: 235 HENEIAQSEGAHGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLEKYDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLY--LAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
R+HYRS +NYS +L+ AK++L RLY L +++P+++ ID +P A+RF A++DD
Sbjct: 295 RAHYRSPLNYSSHHLDDAKQALTRLYNTLRGRELPQLD----IDWRQPEAERFKQALDDD 350
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNTP A ++LF+LA+ N+ S A L+ L LGLL+ DEFLK
Sbjct: 351 FNTPEAFAVLFELASEANRTGSAVQAALLKALAGQLGLLQRDPDEFLKGEAV------AG 404
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++I+ I R ARK KNF EAD+IR L GIILED P G T WRR
Sbjct: 405 LSPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILEDTPQG-TSWRR 454
>gi|167586800|ref|ZP_02379188.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 407
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/391 (60%), Positives = 299/391 (76%), Gaps = 7/391 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +LRIYN+ +R KQ+F P PG+V +YVCGIT YDYCH+GHAR+++VFD+VQRWLR
Sbjct: 1 MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAVG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N E+IK+LT RFI A ED L IQ PD +P AT++I
Sbjct: 61 YRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIAAMHEDEDALGIQRPDIEPRATHFI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MIE L NG AYQ N+G DVNYSVR F NYGKLSG+ + + N+
Sbjct: 121 PQMLGMIETLEANGYAYQANDG----DVNYSVRKFANYGKLSGKSLDDLRAGERVAANDA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K DP W+SK+GAGRPGWHIECSAM C LLG HFDIHGGGQDL+
Sbjct: 177 KEDPLDFVLWKRAKPEDPEGASWDSKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYW+H+GFV+++N+KMSKS GNF TIRD+L++Y+ EV+RF
Sbjct: 237 FPHHENEIAQSEGATGQTFVNYWIHNGFVQVDNEKMSKSLGNFFTIRDVLEQYDAEVVRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L+ A+ +L RLY A+KD+ +D NEPHA+RF AMND
Sbjct: 297 FIVRTHYRSPLNYSDVHLDDARAALTRLYTALKDVAPD--AAALDWNEPHAQRFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLR 390
DFNT +A+S+LF+LA +N+ + +A+QL+
Sbjct: 355 DFNTSLAVSVLFELAGEVNRTRDAALARQLK 385
>gi|56478148|ref|YP_159737.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
gi|61216130|sp|Q5P1H8.1|SYC_AROAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56314191|emb|CAI08836.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
Length = 461
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/469 (53%), Positives = 339/469 (72%), Gaps = 11/469 (2%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+N+ +R+K+ F PI PGKV +YVCG+T YDYCHLGHAR+M+VFD+V RWLR + +++
Sbjct: 2 LHIHNTLTRRKEAFVPIAPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + ESI+TLT RFI A ED+ L + PD++P AT Y+ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAGEKGESIRTLTDRFIAAMHEDADALGVLRPDHEPRATEYVMQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+I +L GLAY N DV YSVR F +YG+ SG+ + + E K+D
Sbjct: 122 QSLIGRLRDKGLAYVAGNR----DVCYSVRKFDSYGRFSGKSLDELRAGERVEVAGDKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK ++ ++P E++W S WGAGRPGWHIECSAMS LLG FDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKHARTDEPDEVKWASPWGAGRPGWHIECSAMSSDLLGEQFDIHGGGQDLQFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H FVNYWMH+GFV+++++KMSKS GNF TIRD+L++++PEV+RFFIL
Sbjct: 238 HENEIAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLERFDPEVVRFFIL 297
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L A+++L RLY A++++ + + +D +EPHA RF AM+DDFN
Sbjct: 298 RAHYRSPLNYSDAHLEDARQALTRLYTALRNVQPSDAQ--VDWDEPHAMRFRAAMDDDFN 355
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
T A+++LF+LAN N++ S A QL+GLG LGLL FL+ + E K +
Sbjct: 356 TAEAVAVLFELANEANRSGSAATAAQLKGLGGVLGLLAREPASFLQGRMAGEPDKGEGVA 415
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+ A+K K++ EAD+IR +L+ +GI+LED P+G T WRR
Sbjct: 416 ---IESMIERRALAKKSKDYAEADRIRAQLLASGIVLEDTPHG-TVWRR 460
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/471 (52%), Positives = 339/471 (71%), Gaps = 18/471 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+KQ F P+TPGKV +YVCG+T YDYCHLGHAR+M+VFD+VQRW R N +DV
Sbjct: 2 LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ESI+ LT+RFI+A +ED+ L ++PP ++P AT ++ +
Sbjct: 62 TYVRNITDIDDKIIRRAQENKESIEALTARFIQAMEEDAAALGVEPPSWEPRATRHVEDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ MI+ L+ LAY +NG DV Y+V F YGKLSG+ S + + E+ + K
Sbjct: 122 IAMIQVLVDKKLAYPASNG----DVYYAVHRFPGYGKLSGK--SLDELRAGERVIVDPHK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K +P +W+S WG GRPGWHIECSAM + LG HFDIHGGGQDL+F
Sbjct: 176 NDPLDFVLWKAAKPGEP---QWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ H FVNYWMH+GFV++N++KMSKS GNF T+R++L + PEV+RFF
Sbjct: 233 PHHENEIAQSEGAHGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILAHFQPEVVRFF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
ILR+HYRS +NY+++ L A ++L RLY A+K I +++ + ID ++P+A RF AMNDD
Sbjct: 293 ILRAHYRSPLNYADMQLEDAGRALDRLYTALKGI-EVHDEVEIDWDDPYASRFREAMNDD 351
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNTP A+++LFDLA +NK + + ++ LG LGLL+ ++ + ++
Sbjct: 352 FNTPEALAVLFDLATEVNKTRLPRDIALMKALGGVLGLLQQDPWKYFQQ----ADSEDPA 407
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ ++ I R AR K++ EAD+IR+EL+ IILED P+G T WRR
Sbjct: 408 FAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILEDGPHGTT-WRR 457
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/475 (53%), Positives = 325/475 (68%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K++F P GK LYVCG+T YDYCH+GHAR+M+VFD+V R+LR Y +
Sbjct: 2 LKIYNTLTRQKELFKPRLEGKAGLYVCGMTVYDYCHVGHARVMVVFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TDIDDKII A+ N E ++LT RFI+A ED L + PPD +P AT IP+I
Sbjct: 62 TYVRNVTDIDDKIIQRARDNGEDFQSLTERFIEAMHEDERALSVLPPDIEPKATQSIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
L MIEKLI NG+AY +NG DV YSV F NYG+LSG+ L + E K+D
Sbjct: 122 LAMIEKLIANGIAYVGSNG----DVFYSVSKFSNYGRLSGKNLAELQAGERVEIEQAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPAWESPWGQGRPGWHIECSAMSTGCLGNHFDIHGGGMDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA KFVNYWMH+GFV+IN +KMSKS GNF T+R++LK+Y EV+RFFIL
Sbjct: 235 HENEIAQSEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREVLKRYRSEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS +L+ A +L RLY +++ I ++ D + RF AM+DDFN
Sbjct: 295 TSHYRSPLNYSNEHLDEAAVALTRLYTSLRGIDAGEFEVEAD----YEARFREAMDDDFN 350
Query: 363 TPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TPVA+S+LFD+A +N K ++ ++A +RGLG LG+L+ ++ FLK
Sbjct: 351 TPVALSVLFDMARELNKVKDSDKQRASQLAATIRGLGGVLGILQDDAERFLKEG----DN 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + I+ I R +A+K KN+ EADKIR +L G+ILED+P G T WRR
Sbjct: 407 QAEGLTAEQIETLIQARIDAKKNKNWAEADKIRDQLKQQGVILEDVPGGGTNWRR 461
>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
Length = 460
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/469 (54%), Positives = 331/469 (70%), Gaps = 12/469 (2%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+N+ SR K++F PI PGKV +YVCG+T YDYCHLGHAR+M+VFD+V RWLR + +DV
Sbjct: 2 LSIHNTLSRSKEVFRPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ESI+ LT RFI A ED+ L + PD++P AT+Y+ +
Sbjct: 62 TYVRNITDIDDKIIRRAQENGESIRALTDRFIAAMHEDADALGVLRPDHEPRATDYVASM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+IE+L GLAY N DV Y+VR F YGKLSG+ + + E KKD
Sbjct: 122 QSLIERLHAKGLAYV----AANHDVCYAVRKFEGYGKLSGKSLDELRAGERVEVAGEKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P E +W S WG+GRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLGEHFDIHGGGQDLQFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H FVNYWMH+GFV+++++KMSKS GNF TIRD+L+ Y+ EV+RFFIL
Sbjct: 238 HENEIAQSEGAHGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLETYDAEVVRFFIL 297
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L+ A+++L RLY A++ + +D E HA RF AM+DDFN
Sbjct: 298 RAHYRSPLNYSDAHLDDARQALTRLYTALRSVEAA--PAAVDWTESHALRFRAAMDDDFN 355
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
T A+++LF+LAN +N+ + +A QL+ LG LGLLE FL+ +
Sbjct: 356 TAEALAVLFELANEVNRGRDPLLAAQLKALGAVLGLLERDPVAFLQGST----PAASGLG 411
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
DI+ +I R+ A+K K+F EAD+IR EL+ GI+LED G T WRR
Sbjct: 412 PEDIEARIAARAAAKKAKDFAEADRIRAELLAAGIVLEDGAGGTT-WRR 459
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/479 (53%), Positives = 334/479 (69%), Gaps = 23/479 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+KQ F PI GKVS+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + Y V
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+I LT RFI+A EDS L I PD +P AT +I +
Sbjct: 62 TYVRNITDIDDKIIKRANENGETIGQLTQRFIEAMDEDSAKLGIIRPDIEPKATEFIDGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
++MI LI G AY NGDV YSV NF YGKLSG+ + + E + KKD
Sbjct: 122 IQMISALIEKGFAYV----AANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDTHKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGA-----GRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
P+DF LWK K N+P W+S +G GRPGWHIECSAMS + LG HFDIHGGGQD
Sbjct: 178 PMDFVLWKSVKPNEP---SWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQD 234
Query: 238 LKFPHHENEIAQSEGAYKH-----KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKY 292
L+FPHHENEIAQSE A+ H + VNYWMH+GFV+++++KMSKS GNF TIR +L+KY
Sbjct: 235 LQFPHHENEIAQSEAAHSHNGEPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLEKY 294
Query: 293 NPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKR 352
+ EV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +++ + ID +PH+ R
Sbjct: 295 DAEVVRFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRG--HVVADVAIDWQQPHSAR 352
Query: 353 FIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
F AM+DDFNTP A+++LFDLAN +NK KS+++A L+ L LGLL+ +D FL+ ++
Sbjct: 353 FKEAMDDDFNTPEAMAVLFDLANEVNKTKSLEVAALLKSLAGVLGLLQRDADAFLQGDVA 412
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + DI + R+EA+K KNF EAD+IR+EL + GI+LED G T WR+
Sbjct: 413 AQLAG--TELKIDIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLEDTALGTT-WRK 468
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/471 (55%), Positives = 341/471 (72%), Gaps = 17/471 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PITPGKV LYVCG+T YDYCHLGHAR+++VFD V RW N++ V
Sbjct: 2 LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEANDFTV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A++NNESI+ LT RFI+A EDS+ L + P ++PCAT+++ +
Sbjct: 62 NYVRNITDIDDKIIKRAQENNESIEALTQRFIQAMNEDSVALGVSSPTHEPCATHHVKSM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ MI L+ LAYQ +NG DV +SV NF YGKLSG+ S N + E+ ++ K
Sbjct: 122 IGMISTLVEKNLAYQAHNG----DVYFSVHNFPGYGKLSGK--SLNDLRAGERVDIDSSK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
KDPLDF LWK +K+ +P+ W S WG GRPGWHIECSAM LG HFDIHGGGQDL+F
Sbjct: 176 KDPLDFVLWKSAKSGEPF---WESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ H FVNYWMH+GFV+++N+KMSKS GNF T+R++LK Y PEV+RFF
Sbjct: 233 PHHENEIAQSEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPEVVRFF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
ILR+HYRS +NYS+ +L K +L RLY+A+K++ I+ + +D N P+A++F AM+DD
Sbjct: 293 ILRAHYRSPLNYSDQHLKDTKLALDRLYIALKEVEPISVAR-VDWNYPYAQKFKRAMDDD 351
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNTP AI++LFDLA+ INK S + A L+ LG LGLL+ + E+L+N + +N
Sbjct: 352 FNTPDAIALLFDLASDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQNKAAS---SELN 408
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S +D++ I R ARK + +AD IR++L GIILED G T WRR
Sbjct: 409 SSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGIILEDSSQGTT-WRR 458
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/470 (53%), Positives = 332/470 (70%), Gaps = 15/470 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ SR+K++F PI PGKV++YVCG+T YDYCHLGHAR+M+VFD+V RWLR + Y V
Sbjct: 2 LNLYNTLSREKEVFRPIVPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI LT RFI A ED+ L + PD++P AT ++ +
Sbjct: 62 DYVRNITDIDDKIIKRALENGESINALTQRFIDAMNEDADALGVLRPDHEPRATEFVGAM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+MI +LI NGLAY NGDV Y+VR F YGKLSG+ + +++ N K+
Sbjct: 122 HQMIGRLIDNGLAYS----APNGDVYYAVRKFDGYGKLSGKSLDDLRAGERVDVDPN-KQ 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K ++P + +W+S WGAGRPGWHIECSAMSC+ LG+HFDIHGGG DL+FP
Sbjct: 177 DPLDFVLWKAAKADEPADAKWDSPWGAGRPGWHIECSAMSCHHLGAHFDIHGGGADLQFP 236
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA ++VNYWMH+GF++++N+KMSKS GNF TIR++LKKY+ EV+RFFI
Sbjct: 237 HHENEIAQSEGASGQRYVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLKKYDAEVVRFFI 296
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYRS +NYS+++L+ A+ +L RLY A+K +P +D P+A RF AM+DDF
Sbjct: 297 LRAHYRSPLNYSDMHLDDARNALTRLYTALKAVPADAV--TLDWQSPYAARFKAAMDDDF 354
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NT A+++LFDLA+ N+ +S +A +L+ L LGLL FL+ + +
Sbjct: 355 NTTEAVAVLFDLAHEANRQQSPALAGELKALAGVLGLLGREPQAFLQAEV-----GEGEW 409
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S I+ I R AR KN+ E+D+IR EL G++LED G T WRR
Sbjct: 410 SAERIEAAIAARKAARAAKNWAESDRIRDELAAAGVVLEDGAQG-TGWRR 458
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/469 (56%), Positives = 341/469 (72%), Gaps = 12/469 (2%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PI PGKV +YVCG+T YDYCHLGHAR+++VFD V RW + N++DV
Sbjct: 2 LKIYNSIAREKQDFVPIIPGKVKIYVCGMTVYDYCHLGHARVLVVFDTVIRWFKANDFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+YVRNITDIDDKII A++NNESI TLT RFI+A EDS L + P Y+P AT+Y+ +
Sbjct: 62 SYVRNITDIDDKIIKRAQENNESIGTLTQRFIQAMNEDSSALGVSSPTYEPRATDYVENM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MI LI LAY+ +NG DV Y+V NF +YG+LSG+ ++ + E ++ KKD
Sbjct: 122 IGMIGTLIEKDLAYRASNG----DVYYAVHNFPSYGQLSGKSLNDLRAGERVEIDSNKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P+ W S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKSAKPGEPF---WESPWGRGRPGWHIECSAMSEQLLGVHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H FVNYWMH+GFV+++N+KMSKS GNF T+R++LK Y PEV+RFFIL
Sbjct: 235 HENEIAQSEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKHYQPEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+ YRS +NYS+ +L K +L RLY+A+K++ I+ ID N HA+RF AM DDFN
Sbjct: 295 RAQYRSPLNYSDQHLKDTKLALDRLYIALKEVKPIDMPA-IDWNNLHAQRFKTAMEDDFN 353
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
TP AI++LF+LA+ +NK S + A L+GLGN LGLL+ + E+L+N + T ++
Sbjct: 354 TPEAIAVLFELASDVNKTGSKENAGLLKGLGNLLGLLQQNPQEYLQNKVVTSELNSL--P 411
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ I+ I R ARK + +AD IR+ L+ GIILED P G T WRR
Sbjct: 412 QDAIERLIQQRISARKEGRYSDADAIRKNLLEQGIILEDNPQGTT-WRR 459
>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
gi|122967676|sp|Q129L2.1|SYC_POLSJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 462
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/467 (50%), Positives = 323/467 (69%), Gaps = 13/467 (2%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR ++F P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWL+++
Sbjct: 2 SLRIYNTLSRDVEVFSPLLPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGLK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN+TDIDDKII A +N E+I++LT R + A +D+ L I+ P ++P AT+++PQ
Sbjct: 62 VTYVRNVTDIDDKIIKRAVENGETIRSLTDRMVVALHQDADALGIERPTHEPRATDFVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L +I L GLAYQ +G GDVNY+VR F YGKLSG+ + + E + K
Sbjct: 122 MLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDELRAGERVEVLDGKD 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K ++P + +W+S +G GRPGWHIECSAM+C LLG FDIHGGG DL+FP
Sbjct: 182 DPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGESFDIHGGGADLQFP 241
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA+ WMH+GFV+++N+KMSKS GNF TIR++L KY+ E +RFFI
Sbjct: 242 HHENEIAQSEGAFGKPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREILAKYDAETVRFFI 301
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMNDD 360
+R+HYRS +NYS+ +L+ A+ SL RLY A+ + P + ID P A RF AM++D
Sbjct: 302 IRAHYRSPLNYSDAHLDDARNSLKRLYTALDLVSPAV---VAIDWTNPFAARFKAAMDED 358
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
F TP A+++LFDLA +NK +S ++A L+ LG LGLL+ + +L +
Sbjct: 359 FGTPEAVAVLFDLAGEVNKTRSAELAGLLKSLGGCLGLLQSAPGSYL--------QAGAG 410
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ I+ I R++A+K KNF EAD+IR +L+ GI+L+D P G T
Sbjct: 411 LDDASIQRLIAQRADAKKTKNFAEADRIRNDLLGQGIVLKDSPAGTT 457
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/473 (53%), Positives = 341/473 (72%), Gaps = 23/473 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R KQ F PITPG V +YVCG+T YD+CHLGHAR+++VFD+VQRWLR + V
Sbjct: 2 LKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRASGLRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ESI LT+RFI +D+ L ++ PD++P AT Y+PQ+
Sbjct: 62 TYVRNITDIDDKIIKRALENKESIGDLTNRFIAFMNDDAAALGVEKPDHEPRATEYVPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L++I +L NGLAYQ +G DVN+SVR F YGKLSG+ + + + + K+D
Sbjct: 122 LELIGRLEKNGLAYQVPDG----DVNFSVRKFPGYGKLSGKALDDLRAGERVDVDGTKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK ++ +P W S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKHAREGEP---SWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA++ +FVNYWMH+GFV+++++KMSKS GNFCTI+++L+KY+PEV+RFFIL
Sbjct: 235 HENEIAQSEGAHQCRFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEILRKYDPEVLRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
R+HYRS +NYS+ +L+ A+++L RLY A++ D P I++ +EPHA RF AM+
Sbjct: 295 RAHYRSPLNYSDTHLDDARQALSRLYTALRTANTDPPSIDW------DEPHALRFRDAMD 348
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTP A ++LFDLA +N++KS +A QLRGL LGLL FL+ +
Sbjct: 349 DDFNTPEACAVLFDLAAELNRSKSATLAGQLRGLAGLLGLLGRDPQVFLQ----AAPSEG 404
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+ A+ +K++ AD+IR +L++ G++LED +G T WRR
Sbjct: 405 GELTAEQIESLISERAAAKAQKDYTAADRIRADLLSAGVVLEDGASG-TRWRR 456
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/480 (52%), Positives = 323/480 (67%), Gaps = 21/480 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR KQ+F PI PGKV +YVCG+T YD+CH+GHAR+MIVFD+V RWLR + Y+V
Sbjct: 2 LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I LT+RF+ A DS L + PD +P AT+YI Q+
Sbjct: 62 LYVRNITDIDDKIINRAIENGEPISALTNRFVDAMHADSDELGLMHPDQEPRATDYIAQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI KLI N LAYQ N +GDVN++VR YG+LSG+ + N + + K+D
Sbjct: 122 QGMIGKLIENELAYQAN----DGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGDGKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P + RW S WG GRPGWHIECSAMSC LLG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPH 237
Query: 243 HENEIAQSEGAYKHK--------FVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP 294
HENEIAQSEGA K FVNYWMH+G +++N +KMSKS GNF IRD+LK ++P
Sbjct: 238 HENEIAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKSFDP 297
Query: 295 EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFI 354
EVIRFF+L++HYRS INYS+ L A+ L+RLY A+ K + N P AKRF
Sbjct: 298 EVIRFFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTISLGSSN-PWAKRFA 356
Query: 355 IAMNDDFNTPVAISILFDLANIINKNKSIK---MAKQLRGLGNWLGLLEYSSDEFLKNNI 411
AMNDDFNTP AI++LFD+ + +N+ + + +A L+ LG L L+ FL+++
Sbjct: 357 DAMNDDFNTPEAIAVLFDIVSEVNRAQGEEKQVLANILKALGASLNFLQRDPTVFLQSSA 416
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K S I+ +I R A++ K+F +AD IR+ L+ GI+LED P G T WRR
Sbjct: 417 ----KDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKALLEQGIVLEDKPGGLTGWRR 472
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/476 (52%), Positives = 335/476 (70%), Gaps = 19/476 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IY++ +R ++ F P+TPGKV +YVCG+T YD+CHLGHAR+++VFD V RWL+ +Y+V
Sbjct: 2 LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N+E LT+R+I+A +ED+ L I P ++P AT I +
Sbjct: 62 TYVRNITDIDDKIIRRALENHEPFGALTARYIQAMEEDAAALGIISPSFEPRATECIESM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE L+ GLAY NNG DV Y VR F YGKLSG+ + + E + K+D
Sbjct: 122 VTMIESLLSKGLAYVANNG----DVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K ++P W+S WG GRPGWHIECSAMS + LG FDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPDEP---SWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEG + H VNYWMH+GFV+++N+KMSKS GNF T+R++L +Y PEV+RFFI+
Sbjct: 235 HENEIAQSEGVHGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLARYQPEVVRFFIV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKD------IPKINYKKIID-LNEPHAKRFII 355
R+HYRS +NYS+ +LN A+ +L RLY A+K+ ID +N+ +A+RF+
Sbjct: 295 RAHYRSPLNYSDAHLNDARNALERLYTALKNHAPSQAQAAEEATATIDWVNDGYAQRFMA 354
Query: 356 AMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
AMNDDFNTP A+++LFDLA+ N+ + A L+ LG LGLL+ S ++L++ + +
Sbjct: 355 AMNDDFNTPEAVAVLFDLASEANRTGNSHYASLLKALGGILGLLQQSPRQYLQHPAHPQ- 413
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N ++S +I+ I R +ARK KNF +AD +RQ+L GIILED P G T WRR
Sbjct: 414 --NDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILEDGPQGTT-WRR 466
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/469 (54%), Positives = 331/469 (70%), Gaps = 16/469 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS R+KQ+F PI P KV +YVCG+T YDYCHLGHAR+M+VFD+V RWL+ + YDV
Sbjct: 2 LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+I+ LT+RFI ED+ L +Q PDY+P AT Y+P++
Sbjct: 62 TYVRNITDIDDKIIKRAIENGETIQQLTNRFIAFMHEDADALGVQRPDYEPRATEYVPEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L +I KL NGLAYQ ++G DVNY+VR F YGKLSG+ + + E ++ K+D
Sbjct: 122 LDLIGKLEANGLAYQASDG----DVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDSAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKHAK---PGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA FVNYWMH+GFV+++N+KMSKS GNF TIR +L++++ EV+RFFIL
Sbjct: 235 HENEIAQSEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L+ A++SL LY A++D+P ID + A RF A+N+DF+
Sbjct: 295 RAHYRSPLNYSDAHLDDARRSLDSLYFALRDVPPAAAD--IDWSNEFAGRFAAALNEDFD 352
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
+ AI++LF+LA +N+ KS ++ L+GLG +GLLE +L+
Sbjct: 353 SHGAIAVLFELAAEVNRQKSAGLSCLLKGLGGVIGLLEREPSAYLQGGAGVG-----GLD 407
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E + I R+ A+K KNF EAD+IR EL GIIL+D P G T WRR
Sbjct: 408 EAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDDSPQGTT-WRR 455
>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
Length = 464
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/472 (53%), Positives = 331/472 (70%), Gaps = 10/472 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M++L+IYN+ +R+KQ+F P+ G+ +YVCG+T YDYCH+GH R+M+ FD+V RWL+++
Sbjct: 1 MTSLKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQVSG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y VTYVRNITDIDDKII A +N ESI +LT RFI A D+ L I PP + P AT Y+
Sbjct: 61 YSVTYVRNITDIDDKIIRRAVENKESISSLTERFIDAMAYDTAALGILPPTHAPRATRYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L MI +L GLAYQ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLNMITRLQEKGLAYQGDDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K+++P + +W S WG GRPGWHIECSAM+C LLG FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGEQFDIHGGGTDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA F NYW+H+G V+I+N+KMSKS NF IRD+L KY+ EV+RF
Sbjct: 237 FPHHENEIAQSEGANDKPFANYWLHNGHVRIDNEKMSKSLDNFFLIRDVLAKYDAEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FILR+HYRS +NYS+ +L+ A+ +L RLY A+KD+ ++ +D P+ +RF AM+D
Sbjct: 297 FILRAHYRSPLNYSDTHLDDARVALTRLYTALKDVAP--SEEELDWASPYPQRFAEAMDD 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP+A+++LFDLA IN++ +A QLR L LGLLE S EFL+ T
Sbjct: 355 DFNTPLALAVLFDLATEINRSGDPALAAQLRALAAVLGLLERSPLEFLQGAHGTVASDED 414
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N I KI R A+ +++ AD++R EL+ GI+LED P TEWRR
Sbjct: 415 NAL---IAEKIAARIAAKIARDYATADRLRDELLAAGILLEDKPGNITEWRR 463
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/469 (53%), Positives = 329/469 (70%), Gaps = 16/469 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PI GKVS+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + YDV
Sbjct: 2 LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ESI+ LTSRFI A ED+ L + PD +P AT +I +
Sbjct: 62 TYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHITGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI LI G AY +NG DV YSV +F YGKLSG+ + + E + +K+D
Sbjct: 122 LDMIAALIEKGFAYPADNG----DVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E W+S WG GRPGWHIECSAM LG HFDIHGGGQDL+FPH
Sbjct: 178 PMDFVLWKAAK---PGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A FVNYWMH+GF++++++KMSKS GNF TIR +L+KY+ EV+RFFIL
Sbjct: 235 HENEIAQSEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+ YRS +NYS+ +L+ A+++L RLY A++ + + ID +P A RF AM+DDFN
Sbjct: 295 RAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTF--TIDWQQPQAARFKAAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
T A ++LF+LA+ +N+ S+ A L+ L LGLL+ + FL+ + + S
Sbjct: 353 TSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQGR-----S 407
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++I+ I R +AR+ KNF EAD+IR++L + GI+LED P G T WRR
Sbjct: 408 ADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDSPQG-TSWRR 455
>gi|237653707|ref|YP_002890021.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
gi|237624954|gb|ACR01644.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
Length = 461
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/471 (54%), Positives = 336/471 (71%), Gaps = 15/471 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F PI PGKV +YVCG+T YD+CHLGHAR+M+VFD+V RWLR + DV
Sbjct: 2 LSIYNTLSRSKEAFTPIEPGKVRMYVCGMTVYDFCHLGHARVMVVFDMVARWLRASGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ESI+ LT RFI A ED+ L + PD++P AT+Y+ Q+
Sbjct: 62 TYVRNITDIDDKIIRRAQENGESIRQLTDRFIAAMHEDADALGVLRPDHEPRATDYVAQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---K 180
+I +L GLAY N DV Y+VR F YGKLSG+ S + + E+ + K
Sbjct: 122 QSLISRLEQKGLAYVAGNR----DVCYAVRKFDGYGKLSGK--SLDELRAGERVDVAQDK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K +P E++W S WG GRPGWHIECSAMS LLG HFDIHGGG DL+F
Sbjct: 176 NDPLDFVLWKHAKVEEPGEVKWASPWGEGRPGWHIECSAMSSDLLGDHFDIHGGGMDLQF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ H FVNYWMH+GFV+++++KMSKS GNF TIR++L+KY+PEV+RFF
Sbjct: 236 PHHENEIAQSEGAHGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQKYDPEVVRFF 295
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
ILR+HYRS +NYS+ +L A+ +L RLY A+K++P + + ++D +EP A+R AM+DD
Sbjct: 296 ILRAHYRSALNYSDAHLEDARNALTRLYTALKNVP-VAGEPVVDWSEPFAQRLRAAMDDD 354
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNT A+++LF+LAN +N++ + +A QL+ LG LGLL FL+ + +
Sbjct: 355 FNTAEAVAVLFELANEVNRSAAPALAAQLKALGGVLGLLGREPQAFLQAGAPDADGLDAD 414
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ KI R+ A+K KNF EAD+IR EL G+ILED P G T WRR
Sbjct: 415 A----IEAKIAERAAAKKAKNFAEADRIRAELTEAGVILEDGPGGTT-WRR 460
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/470 (52%), Positives = 331/470 (70%), Gaps = 17/470 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ SR+K+ F PI PGKV++YVCG+T YDYCHLGHAR+M+VFD+V RWLR + YD+
Sbjct: 2 LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E I LT RFI A ED+ L +Q P+++P AT ++P +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPINVLTQRFIDAMDEDAAALGVQKPNFEPRATQFVPDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ MIE+LI G AY NGDV Y+VR F YG+LSG+ + +++ N K+
Sbjct: 122 ISMIEELIGKGRAY----AAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDPN-KR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP+DF LWK +K P E W S WG GRPGWHIECSAM+ + G HFDIHGGG DL+FP
Sbjct: 177 DPMDFVLWKAAK---PGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA+ KFVNYWMH+GF++++N+KMSKS GNF TIR++L+KY+ EV+RFFI
Sbjct: 234 HHENEIAQSEGAHDCKFVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLEKYDAEVVRFFI 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYRS +NYS+ +L A+ +L RLY A+K++P + + N+ +A+RF AM+DDF
Sbjct: 294 LRAHYRSPLNYSDAHLEDARSALSRLYTALKNVPAADVALDWEAND-YARRFRAAMDDDF 352
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NT A+++LF+LA NK++S ++A L+ LG LGLL+ +FL+
Sbjct: 353 NTVEAVAVLFELAGEANKSRSAELAGWLKTLGGVLGLLQRDPVDFLQGG-----SLEGEI 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++++ I R AR K++ E+D+IR EL+ GI+LED G T WRR
Sbjct: 408 SADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLEDGAGGTT-WRR 456
>gi|456063198|ref|YP_007502168.1| Cysteinyl-tRNA synthetase [beta proteobacterium CB]
gi|455440495|gb|AGG33433.1| Cysteinyl-tRNA synthetase [beta proteobacterium CB]
Length = 473
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/480 (52%), Positives = 324/480 (67%), Gaps = 21/480 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR KQ F PI PGKV +YVCG+T YD+CH+GHAR+MIVFD+V RWLR + Y+V
Sbjct: 2 LQIYNTLSRSKQAFKPIEPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I LT RFI A DS L + PD++P AT+YI Q+
Sbjct: 62 VYVRNITDIDDKIINRAIENGEPISALTQRFIDAMHADSDELGLMHPDHEPRATDYIGQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+I +LI LAYQ +GDVN++VR F YG+LSG+ + N + K+D
Sbjct: 122 QGIIGRLIEKELAYQGE----DGDVNFAVRLFPEYGRLSGKSLDELNAGERVAVGGGKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P + RW+S WG GRPGWHIECSAMSC LLG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKSAKPEEPADTRWSSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADLQFPH 237
Query: 243 HENEIAQSEGAY---KHK-----FVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP 294
HENEIAQSEGA HK FVNYWMH+G +++N +KMSKS GNF IRD+LK ++P
Sbjct: 238 HENEIAQSEGALYGQDHKASDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVLKNFDP 297
Query: 295 EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFI 354
EV+RFF+LR+HYRS INYS+ L A+ L+RLY A+ + N + ++ + AKRF
Sbjct: 298 EVLRFFMLRAHYRSPINYSDAQLEEARSGLVRLYTALAQVQLGN--RSVEPDPIWAKRFA 355
Query: 355 IAMNDDFNTPVAISILFDLANIINKNKS---IKMAKQLRGLGNWLGLLEYSSDEFLKNNI 411
AMNDDFNTP AI+ LFDLA+ +N+ + +++A L+ L L L+ FL+
Sbjct: 356 DAMNDDFNTPEAIAALFDLASEVNRAQGEDKVRLASTLKALAGNLNFLQRDPTVFLQEG- 414
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
R + S I+ +I R A++ K+F +AD IR+ L+ G++LED P G TEWRR
Sbjct: 415 --SRGADGGLSAAAIEEQIAARVAAKQAKDFAKADAIRKTLLEQGVVLEDKPGGLTEWRR 472
>gi|299533876|ref|ZP_07047243.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
gi|298718160|gb|EFI59150.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
Length = 461
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 324/466 (69%), Gaps = 14/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + Y
Sbjct: 2 SLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGYK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRAVENGETIRSLTDRMIDALHQDADALGIERPTLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI +L GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLGMIARLQDKGLAYQAGNG----DVNYAVRKFPGYGKLSGKSLDELNAGERVAVADGKH 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K ++P ++RW S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E IRFF+
Sbjct: 238 HHENEIAQSEGATGKPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + ID + P+A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQ--IDWSNPYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS ++A L+ LG LGLL+ +FL+ + V+
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQAG-----AEGVDA 410
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ + +I R+EA+ KN+ EAD+IR+EL++ GI+L+D G T
Sbjct: 411 AAI--EAQIAARAEAKATKNWAEADRIRKELLDQGIVLKDSAAGTT 454
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/471 (53%), Positives = 329/471 (69%), Gaps = 16/471 (3%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+ L+ YNS +R+KQ F PI GKVS+YVCG+T YDYCHLGHAR+M+VFD+V RWLR + Y
Sbjct: 14 TMLKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGY 73
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DVTYVRNITDIDDKII A++N ESI+ LTSRFI A ED+ L + PD +P AT +I
Sbjct: 74 DVTYVRNITDIDDKIIKRAQENGESIQALTSRFITAMDEDAARLGVMRPDLEPKATEHIT 133
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFK 180
+L MI LI G AY +NG DV YSV +F YGKLSG+ + + E + +K
Sbjct: 134 GMLDMIAALIEKGFAYPADNG----DVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQYK 189
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DP+DF LWK +K P E W+S WG GRPGWHIECSAM LG HFDIHGGGQDL+F
Sbjct: 190 RDPMDFVLWKAAK---PGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQF 246
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A FVNYWMH+GF++++++KMSKS GNF TIR +L+KY+ EV+RFF
Sbjct: 247 PHHENEIAQSEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLEKYDAEVVRFF 306
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
ILR+ YRS +NYS+ +L+ A+++L RLY A++ + + ID +P A RF AM+DD
Sbjct: 307 ILRAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTF--TIDWQQPQAARFKAAMDDD 364
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNT A ++LF+LA+ +N+ S+ A L+ L LGLL+ + FL+ + +
Sbjct: 365 FNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQGR---- 420
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++I+ I R +AR+ KNF EAD+IR++L + GI+LED P G T WRR
Sbjct: 421 -SADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDSPQG-TSWRR 469
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/476 (52%), Positives = 331/476 (69%), Gaps = 23/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR KQ F PI GKV +YVCG+T YDYCHLGHAR+M+VFD++ RWLR + +DV
Sbjct: 2 LKIYNTLSRSKQDFIPIESGKVRMYVCGMTVYDYCHLGHARVMVVFDMINRWLRADGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N+E I LT RFI A ED+ L ++ P+++P AT Y+P +
Sbjct: 62 TYVRNITDIDDKIIKRAAENHEPIDALTGRFIAAMDEDATKLGVEKPEHEPRATQYVPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---K 180
+ MI+ L+ NGLAY +G DV YSV F YGKLSG+ S + + E+ + K
Sbjct: 122 IAMIQALMDNGLAYVARSG----DVCYSVHKFPGYGKLSGK--SLDDLRAGERVDVAVGK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K P E +W+S WG GRPGWHIECS MS LLG HFDIHGGG DL+F
Sbjct: 176 DDPLDFVLWKSAK---PGEPQWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGGADLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEG + H+ VNYW+H+GFV+++N+KMSKS GNF TIR++L++Y+ EV+RFF
Sbjct: 233 PHHENEIAQSEGTHGHQHVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAEVVRFF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPK-----INYKKIIDLNEPHAKRFII 355
ILR+HYRS +NYS+ +L+ AK +L RLY A+K++P + ID ++P+A F
Sbjct: 293 ILRAHYRSPLNYSDQHLDDAKGALTRLYTALKNVPPHPSPLTPHGVAIDWHDPYAAAFKA 352
Query: 356 AMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
AM DDFNT A+++LFDLAN NK ++A LR LG LGLL+ EFL+
Sbjct: 353 AMEDDFNTAEAVAVLFDLANEANKTHDKQLASLLRTLGGVLGLLQRGPSEFLQGG----- 407
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ +I R A+K K++ AD+IR+EL++ G++LED P G T WRR
Sbjct: 408 AGESGCTPEQIEQRIAARIAAKKAKDYAAADRIRKELLDQGVVLEDTPQG-TVWRR 462
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/469 (52%), Positives = 319/469 (68%), Gaps = 18/469 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I NS +R K+ F P++PG+V +YVCG+T YD CHLGHAR+ +VFD+V RWLR + Y V
Sbjct: 2 LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT RFI ED L + PPD++P AT Y+ Q+
Sbjct: 62 EYVRNITDIDDKIIKRAHENKETPAALTERFIAEMHEDERALGVLPPDHEPRATAYVAQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L +I +L+ GLAY N DV YSVR F YG+LSG+ + + E + K+D
Sbjct: 122 LALIAQLVDRGLAY----AAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDPNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E W S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+FPH
Sbjct: 178 PMDFVLWKAAK---PGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ FVNYW+H+GFV+++N+KMSKS GNF TIR++L+KY+ E++RFFIL
Sbjct: 235 HENEIAQSEGAHGCTFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAEIVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R+HYRS +NYS+ +L+ A+ +L RLY A+K P +D + P A RF AM+DDFN
Sbjct: 295 RAHYRSPLNYSDAHLDDARGALTRLYTALKGAPAAG---PVDWDAPAAARFRGAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
TP AI++LF+LA N+ + A+ LR LG +GLL+ + +FL+
Sbjct: 352 TPEAIAVLFELAAEANRGDT-GAAQTLRNLGAVIGLLQRDASDFLQAGT-----SEAGLD 405
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++I+ +I R ARK ++F E+D+IR EL GI+LED P G T WRR
Sbjct: 406 ASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLEDGPGGTT-WRR 453
>gi|319943420|ref|ZP_08017702.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319743235|gb|EFV95640.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 506
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/510 (48%), Positives = 321/510 (62%), Gaps = 48/510 (9%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TL++YNS +R+K+ F P+ G+V LYVCG+T YDYCH+GHAR+++ FD+VQRWLR Y
Sbjct: 4 TLKLYNSLTRRKEDFQPLEAGRVGLYVCGMTVYDYCHIGHARMLVAFDVVQRWLRARGYQ 63
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E++ +LT RFI A ED L IQ PD +P AT Y+PQ
Sbjct: 64 VTYVRNITDIDDKIIRRAVENGETLSSLTGRFIAAMHEDEAALGIQRPDLEPRATQYVPQ 123
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L ++ L NG AY++ +GD + VR F YG+L G+ S + + E+
Sbjct: 124 MLDLVSLLEKNGYAYRSG----DGDTLFRVRRFAGYGRLGGK--SLDDLRAGERVAVAAG 177
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DP DF LWK +K +P E W +G GRPGWH+ECSAMS LLG FDIHGGG DL+
Sbjct: 178 KEDPFDFVLWKAAKPEEPAEACWQGPFGPGRPGWHLECSAMSTRLLGRQFDIHGGGADLQ 237
Query: 240 FPHHENEIAQSEGAY----KHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
FPHHENEIAQS+ AY FV YW+H+GFV+++ +KMSKS GNF TIRD+LKK++ E
Sbjct: 238 FPHHENEIAQSDAAYFPEGGKSFVRYWLHNGFVQVDGEKMSKSLGNFFTIRDVLKKFDGE 297
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK-DIPKINYK-------------- 340
VIRFFI+RSHYRS +NYS+ L+ A++SL+RLY A+ D P +
Sbjct: 298 VIRFFIVRSHYRSQVNYSDAGLDDARESLLRLYNALSTDWPAAQAQVEGQAGQGAAVSAG 357
Query: 341 -------------------KIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNK 381
ID +EP A RF AM+DDFNTPVA+S+LF+LA +N+ +
Sbjct: 358 AGQAAAAACADGEAARAAVAAIDWSEPRAMRFAEAMDDDFNTPVAVSVLFELATDLNRTR 417
Query: 382 SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKN 441
+ +QLRGL LGLL +N + + +N I+ + R ARK +N
Sbjct: 418 DPAIERQLRGLAAVLGLLGQDPVAVRRNGLRGAAAHEGDLDDNAIQALVDARLAARKARN 477
Query: 442 FLEADKIRQELVNNGIILEDMPNGKTEWRR 471
F EAD IRQ+L GI LED P G T WRR
Sbjct: 478 FAEADAIRQQLAEAGITLEDGPAGTT-WRR 506
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/476 (53%), Positives = 322/476 (67%), Gaps = 21/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F P+ P +V +YVCG+T YDYCHLGHAR+M+VFD+V R+LR V
Sbjct: 2 LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLGLKV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TDIDDKII A +N E+I LT+RFI+A ED L + PPD++P AT I I
Sbjct: 62 TYVRNVTDIDDKIIRRAVENGETIGALTARFIEAMHEDERALGVLPPDHEPRATESIDDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
L MI LI G AY +NG DV Y+V +F NYG+LSG+ L + E + K+D
Sbjct: 122 LAMIGTLIERGHAYVGSNG----DVFYAVASFPNYGRLSGKNLDELRAGERIEVDEAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P+ W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKSAKPGEPF---WASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA FVNYWMH+GFV+IN +KMSKS GNF T+R++L +Y PEV+RFFIL
Sbjct: 235 HENEIAQSEGATGEHFVNYWMHNGFVRINEEKMSKSLGNFFTVREILARYRPEVVRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMNDDF 361
SHYRS +NYS+ L+ A +L RLY A++ + P + D +E + RF AM DDF
Sbjct: 295 NSHYRSPLNYSDENLDEAAAALSRLYTALRGLAPDLPLPLGEDRDEGFSSRFADAMQDDF 354
Query: 362 NTPVAISILFDLANIINKN------KSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP AI++LFDLA IN++ K+ + L+ LGN LGLL+ + + K++
Sbjct: 355 NTPEAIAVLFDLAREINRHKAAEPAKAAALGATLKSLGNVLGLLQTDPEAYFKSD----- 409
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ DI+ +I R EARK KN+ E+D+IR EL GIILED G T WRR
Sbjct: 410 AGGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIILEDSAAGTT-WRR 464
>gi|398811678|ref|ZP_10570468.1| cysteinyl-tRNA synthetase [Variovorax sp. CF313]
gi|398079926|gb|EJL70760.1| cysteinyl-tRNA synthetase [Variovorax sp. CF313]
Length = 458
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/466 (52%), Positives = 322/466 (69%), Gaps = 15/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR+ + F P+ PG+V +YVCG+T YDYCHLGHAR MI FD+VQRWL+++ +D
Sbjct: 2 SLRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKVSGFD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N ESI+ LT R I A ED+ L I+ P ++P AT+YIPQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGESIRALTDRMIDALHEDADALGIERPTHEPRATDYIPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAY+ NG DVNY+VR F YGKLSG+ I + + + K
Sbjct: 122 MLSMIGTLERKGLAYRAENG----DVNYAVRKFPGYGKLSGKSIDELHAGERVAVLDGKD 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLD LWK +K +P E++W S++GAGRPGWHIECSAM+C LLG DIHGGG+DL+FP
Sbjct: 178 DPLDPVLWKSAKATEPDEVKWASEFGAGRPGWHIECSAMACELLGETLDIHGGGEDLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA N+WMH+GF+ +N+KMSKS GNF IRD+LKKY+ E IRFF+
Sbjct: 238 HHENEIAQSEGANGKPLANFWMHNGFIVTDNEKMSKSLGNFFLIRDVLKKYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYR +NYS+++L+ A+ SL RLY A+ + + K ID +P+A RF AM++DF
Sbjct: 298 LRAHYRRPLNYSDVHLDDARASLKRLYTALDLVAPADVK--IDWTDPYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N+ +S A L+ LG + +L+ FL +
Sbjct: 356 ATPEAVAVLFDLAGEVNRTQSAAQAGLLKALGGCVQILQDDPKAFL--------RAGATL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ KNF EAD+IRQEL+ GI+L+D P G T
Sbjct: 408 DEATIQGRIEARAAAKAAKNFAEADRIRQELLEQGIVLKDSPTGTT 453
>gi|264677338|ref|YP_003277244.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
gi|262207850|gb|ACY31948.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
Length = 461
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 324/466 (69%), Gaps = 14/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + Y
Sbjct: 2 SLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGYK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRAVENGETIRSLTDRMIDALHQDADALGIERPTLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI +L GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLGMIARLQDKGLAYQAGNG----DVNYAVRKFPGYGKLSGKSLDELNAGERVAVADGKH 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K ++P ++RW S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E IRFF+
Sbjct: 238 HHENEIAQSEGATGKPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + ID + P+A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQ--IDWSNPYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS ++A L+ LG LGLL+ +FL+ + V+
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQAG-----AEGVDA 410
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ + +I R+EA+ KN+ EAD+IR+EL++ GI+L+D G T
Sbjct: 411 AAI--EAQIAARAEAKAAKNWAEADRIRKELLDQGIVLKDSAAGTT 454
>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 457
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/472 (48%), Positives = 321/472 (68%), Gaps = 20/472 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TLR++N+ +R+ + F P+ PG+V +YVCGIT YD CH+GHAR+ + FD+V RWL+ + Y+
Sbjct: 2 TLRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + I+ LT + A D L ++PP ++P AT ++PQ
Sbjct: 62 VTYVRNITDIDDKIIRRALERGVGIRALTDEMVAAMHRDFAALGLEPPTHEPRATEFVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I +L NGLAY+ +G DVN++VR F YGKLSG+ S + + E+
Sbjct: 122 MLDIIGRLERNGLAYRAEDG----DVNFAVRRFPGYGKLSGK--SLDELRAGERVAVAGG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S +GAGRPGWHIECSAMSC LLG FD+HGGG DL+
Sbjct: 176 KEDPLDFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGMDLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ H FVNYW+H+GF+ ++N+KMSKS GNF TI D+LKK++ E +RF
Sbjct: 236 FPHHENEIAQSEGAFGHPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVLKKFDGETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+LR+HYRS N+++ L+ A+ +L RLY A+ + + +D ++P A F AM+D
Sbjct: 296 FMLRTHYRSPFNFADSLLDEARAALRRLYTALDGADAVACE--VDWSDPRAAAFKAAMDD 353
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP A+++LF+LAN N+++ MA+ L LG LG+L+ + FL +
Sbjct: 354 DFNTPGALAVLFELANEFNRSRDAAMARLLVSLGAVLGILQQAPRAFL--------QAGT 405
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I +I R+ A++ + F +AD+IR EL G+ L+D P G T W R
Sbjct: 406 GVDDAEIARQIEARATAKRERRFADADRIRAELAAQGVELKDTPQGTT-WVR 456
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/475 (53%), Positives = 321/475 (67%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L+IYN+ +R+K+ F PI P KV LYVCG+T YDYCH+GHAR+M+VFD V R LR YD
Sbjct: 2 ALKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N ESI++LTSRFI A ED L++ PD +P AT Y+ +
Sbjct: 62 VTYVRNITDIDDKIIQRALENKESIQSLTSRFIDAMHEDEKALNVLRPDMEPKATEYMDE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
I MI LI AY NG DV + V+ +YG+LSG+ I + E N+ KK
Sbjct: 122 IETMISTLIEKDFAYPAENG----DVYFHVKADDDYGRLSGKNIEELDSGSRVEINSVKK 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK SK N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG DL FP
Sbjct: 178 DPLDFVLWKASKENEP---AWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A +VN WMH GFV+I+++KMSKS GNF TIR++LK+Y+PEVIR+F+
Sbjct: 235 HHENEIAQSECATGEHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVLKQYHPEVIRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKR----FIIAM 357
L SHYRS +NYSE L+ AK S+ RLY A++ +P D EP + F+ AM
Sbjct: 295 LASHYRSPVNYSEENLDVAKASVGRLYSALELVPA-------DQAEPAESKLEAEFMAAM 347
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
NDDFNTP A+++LF+LA +NK KS +A L+ L N +GLLE +++ F K+ +
Sbjct: 348 NDDFNTPQAMAVLFELAKEVNKQKSPGLAALLKKLANQIGLLEQTAESFFKS-----QPS 402
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + ++ I+ I R+EARK K+F +D+IR EL+ GI L D G T WR+I
Sbjct: 403 DSDLTDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLDSAEG-TSWRKI 456
>gi|121593996|ref|YP_985892.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
gi|187629817|sp|A1W6E1.1|SYC_ACISJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120606076|gb|ABM41816.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
Length = 458
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/466 (51%), Positives = 315/466 (67%), Gaps = 15/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CHLGHAR MI FD+VQRWLR +
Sbjct: 2 SLRIYNTLSRALEEFSPLEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGLA 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P ++P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRAVENGETIRSLTDRMIDALHQDADALGIERPTHEPRATAYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLDMIGTLQGKGLAYQAGNG----DVNYAVRKFPGYGKLSGKSLDELNAGERVAVQDGKH 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P +++W S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E +RFF+
Sbjct: 238 HHENEIAQSEGATGKPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETVRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + +D E +A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVE--VDWAEGYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N++KS A L+ LG LGLL+ +FL K
Sbjct: 356 GTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGGHLGLLQADPQDFL--------KAGAGL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ KNF EAD+IR +L+ GI+L+D +G T
Sbjct: 408 DEAAIQAQIAARATAKAAKNFAEADRIRNDLLAQGIVLKDSASGTT 453
>gi|221068474|ref|ZP_03544579.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
gi|220713497|gb|EED68865.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
Length = 461
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 321/466 (68%), Gaps = 14/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + Y
Sbjct: 2 SLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGYK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHQDADALGIERPTLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI KL GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLGMIAKLQDKGLAYQAGNG----DVNYAVRKFAGYGKLSGKSLDELNAGERVAVADGKL 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K ++P +++W S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKADEPADVKWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E IRFF+
Sbjct: 238 HHENEIAQSEGATGKPFAQTWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + +D + P+A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARGALKRLYTALDLVAPAEVQ--VDWSNPYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS ++A L+ LG LGLL+ +FL+ +
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSPEVAGLLKTLGACLGLLQAEPQKFLQAG-------SEGV 408
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I+ +I R++A+ KN+ EAD+IR+EL+ GI+L+D G T
Sbjct: 409 DAAAIEAQIAARAQAKAAKNWAEADRIRKELLEQGIVLKDSAAGTT 454
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/474 (51%), Positives = 330/474 (69%), Gaps = 17/474 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IY++ +R ++ F P+TPG+V +YVCG+T YDYCHLGHAR+++VFD V RWL+ Y V
Sbjct: 2 LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGYKV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N+E LT+R+I+A +ED++ L + P ++P AT Y+ +
Sbjct: 62 IYVRNITDVDDKIIRRALENHEPFSALTARYIQAMEEDAMALGVISPSFEPRATEYVDSM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE L+ LAY +NG DV Y VR F YGKLSG+ + + E + K+D
Sbjct: 122 IAMIESLLNRELAYVASNG----DVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDTNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K ++P W+S WG GRPGWHIECSAMS + LG FDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPDEP---SWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEG + H VNYWMH+GFV+++N+KMSKS GNF T+R++L +Y PEV+RFFI+
Sbjct: 235 HENEIAQSEGVHGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTRYQPEVVRFFIV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKD-IPKINYK---KIIDL-NEPHAKRFIIAM 357
R+HYRS +NYS+ +LN A+ +L RLY +K+ P + + +ID N +A+RF+ AM
Sbjct: 295 RAHYRSPLNYSDAHLNDARSALERLYTVLKNHAPSQDSEVATAVIDWENNVYARRFMSAM 354
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
NDDFNTP A+++LFDLA+ N+ A L+ LG LGLL+ ++L+ + +
Sbjct: 355 NDDFNTPEAVAVLFDLASEANRTGDSHYASLLKALGGVLGLLQQPPQQYLQYPAHLQ--- 411
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ YS +I+ I R +ARK +NF +AD +RQ+L GIILED P G T WRR
Sbjct: 412 DGQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGIILEDSPQGTT-WRR 464
>gi|388569689|ref|ZP_10156078.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388263112|gb|EIK88713.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 477
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/471 (49%), Positives = 316/471 (67%), Gaps = 13/471 (2%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TL I+N+ +R+ + F PI PG V +YVCGIT YD CH+GHAR I FD+ +RWL Y
Sbjct: 19 TLHIHNTLTRRLEPFAPIEPGHVRMYVCGITVYDLCHVGHARSNIAFDVARRWLEATGYR 78
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N ES++ LT R I A ED L I P + P AT+Y+PQ
Sbjct: 79 VTYVRNITDIDDKIIRRAVQNGESVRALTDRMIAAMYEDFDALGIARPTHDPRATDYVPQ 138
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L ++ +L LAY++ +G DVNY+VR F YGKLSG+ + N + K
Sbjct: 139 MLDIVRRLEERNLAYRSGDG----DVNYAVRRFPGYGKLSGKTLDELNAGERVAVAQGKD 194
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P + +W+S +G GRPGWHIECSAMSC LLG FDIHGGG DL+FP
Sbjct: 195 DPLDFVLWKAAKPEEPADAQWDSPYGRGRPGWHIECSAMSCALLGETFDIHGGGADLQFP 254
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA WMH+GFV ++N+KMSKS GNF TIR++L++Y+ E +RFF+
Sbjct: 255 HHENEIAQSEGANGVPLAKVWMHNGFVNVDNEKMSKSLGNFFTIREVLQRYDAETVRFFM 314
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYRS +N+S+ +L+ A+ +L RLY A+ + + +D +P A RF AM+DDF
Sbjct: 315 LRAHYRSPLNHSDAHLDDARAALKRLYTALSAVKAADVA--MDWADPFAARFKAAMDDDF 372
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NTPVA+S+LFDLA+ IN+ K + A LR LG LGLL+ ++L+ ++
Sbjct: 373 NTPVALSVLFDLASEINRGKDPRQAGLLRALGGVLGLLQADPVKYLQGGGASDELVGAV- 431
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ KI R+ A+ ++F EAD+IR+EL++ GI+L+D G T W R+
Sbjct: 432 ----IEAKIADRASAKLARDFAEADRIRKELLDAGIVLKDSAAGTT-WERV 477
>gi|418530405|ref|ZP_13096328.1| cysteinyl-tRNA synthetase [Comamonas testosteroni ATCC 11996]
gi|371452124|gb|EHN65153.1| cysteinyl-tRNA synthetase [Comamonas testosteroni ATCC 11996]
Length = 461
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/468 (51%), Positives = 322/468 (68%), Gaps = 15/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + Y
Sbjct: 2 SLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGYK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHQDADALGIERPTLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI +L GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLSMIAQLQTKGLAYQAGNG----DVNYAVRKFPGYGKLSGKTLDELNAGERVAVADGKH 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK SK ++P +++W S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSSKADEPADVKWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E IRFF+
Sbjct: 238 HHENEIAQSEGATGKPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + ID + +A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARGALKRLYTALDLVAPAEVQ--IDWSNSYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS ++A L+ LG LGLL+ +FL+ + V+
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSPEVAGLLKVLGASLGLLQTEPQKFLQAG-----AEGVDA 410
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ + +I R+ A+ KN+ EAD+IR+EL+ GI+L+D G T W
Sbjct: 411 AAI--EAQIAARTAAKAAKNWAEADRIRKELLEQGIVLKDSAAG-TSW 455
>gi|319794160|ref|YP_004155800.1| cysteinyL-tRNA synthetase [Variovorax paradoxus EPS]
gi|315596623|gb|ADU37689.1| cysteinyl-tRNA synthetase [Variovorax paradoxus EPS]
Length = 458
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/468 (52%), Positives = 319/468 (68%), Gaps = 16/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR+ + F P+ PGKV +YVCG+T YDYCHLGHAR MI FD+VQRWL+ + +D
Sbjct: 2 SLRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGFD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N ESI+ LT R I A ED+ L I P ++P AT+YIPQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGESIRALTDRMIDALHEDADALGIARPTHEPRATDYIPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAY+ NG DVNY++R F YGKLSG+ I + + + K
Sbjct: 122 MLSMIGTLEKKGLAYRAENG----DVNYAIRKFPGYGKLSGKSIDELHAGERVAVLDGKD 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLD LWK +K ++P E++W S++GAGRPGWHIECSAM+C LLG DIHGGG+DL+FP
Sbjct: 178 DPLDPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGEDLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA NYWMH+GF+ +N+KMSKS GNF IRD+LKKY+ E IRFF+
Sbjct: 238 HHENEIAQSEGANDKPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVLKKYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYR +NYS+++L+ A+ SL RLY A+ + ID +P+A RF AM++DF
Sbjct: 298 LRAHYRRPLNYSDVHLDDARNSLKRLYTALDLVAPAEV--TIDWTDPYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N+ +S A L+ LG + +L+ FL +
Sbjct: 356 ATPEAVAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSDPKSFL--------RAGATL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ I+ +I R+ A+ KNF EAD+IRQ L+ GI+L+D P G T W
Sbjct: 408 DDAAIQAQIDARAAAKAAKNFAEADRIRQGLLEQGIVLKDSPTG-TSW 454
>gi|333915757|ref|YP_004489489.1| cysteinyl-tRNA synthetase [Delftia sp. Cs1-4]
gi|333745957|gb|AEF91134.1| cysteinyl-tRNA synthetase [Delftia sp. Cs1-4]
Length = 461
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/469 (50%), Positives = 317/469 (67%), Gaps = 20/469 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F PI PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + +
Sbjct: 2 SLRIYNTLSRALEAFSPIEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGHR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P ++P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHQDADALGIERPTHEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI +L GLAYQ +G DVN++VR F YGKLSG+ + + + K+
Sbjct: 122 MLSMIGRLQDKGLAYQGTDG----DVNFAVRKFPGYGKLSGKSLDELQAGERVAVQDGKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P E++W S WG GRPGWHIECSAM C +LG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKPAEPEEVKWASPWGVGRPGWHIECSAMGCEMLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E +RFF+
Sbjct: 238 HHENEIAQSEGATGKPFSQVWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETVRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS+++LN A+ +L RLY A+ + ID N P A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSDVHLNDARGALKRLYTALSLVAPAEVA--IDWNHPAAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS + A L+ L LGLL+ FL+
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSAETAGLLKALAGCLGLLQGDPQAFLQ----------AGT 405
Query: 422 SENDI---KLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
SE D + +I R+ A+ K++ EAD+IR+ L+ GI+L+D P G T
Sbjct: 406 SEMDAGAIEAQIAARAAAKAAKDWAEADRIRKALLEQGIVLKDSPAGTT 454
>gi|349574997|ref|ZP_08886926.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
gi|348013441|gb|EGY52356.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
Length = 469
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/481 (50%), Positives = 318/481 (66%), Gaps = 27/481 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR + Y +
Sbjct: 2 LNIYNTLTRQKEAFVPLNPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRHSGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI A ED+ L + PD +P AT ++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIAELTARFIAAMNEDAEALGVLRPDVEPKATEHVAQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
++MIE+LI G AY + NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 IRMIERLIAKGKAYAAD----NGDVYYAVREFAAYGQLSGKSLDDLRAGQRVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K N+ W+S WG GRPGWHIECSAM L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKPNEA--DFWDSPWGRGRPGWHIECSAMGGELFGDTFDIHGGGADLQFPH 235
Query: 243 HENEIAQSEGAYKH------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK 290
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIRD+LK
Sbjct: 236 HENEIAQSVGALGHSCGHTHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLK 295
Query: 291 KYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA 350
Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY A+K+ P ++ + N+ +
Sbjct: 296 AYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPADFTLSEEAND-YT 354
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
+RF AMNDDF T A+++LF+LA +NK S ++A L+ LG LGLL+ FL+
Sbjct: 355 RRFYAAMNDDFGTVEAVAVLFELAGEMNKTNSAELAGCLKALGGVLGLLQREPQAFLQGG 414
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
S +I+ I R +AR KN+ E+D+IR L IILED G T WR
Sbjct: 415 ------STGGLSNEEIETLIARRKQARADKNWAESDRIRDLLTAENIILEDGAGGTT-WR 467
Query: 471 R 471
R
Sbjct: 468 R 468
>gi|160897948|ref|YP_001563530.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
gi|229558629|sp|A9BZ45.1|SYC_DELAS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160363532|gb|ABX35145.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
Length = 461
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/469 (50%), Positives = 317/469 (67%), Gaps = 20/469 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F PI PG V +YVCG+T YD CHLGHAR M+ FD+VQRWLR + +
Sbjct: 2 SLRIYNTLSRALEAFSPIEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGHR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P ++P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHQDADALGIERPTHEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI +L GLAYQ +G DVN++VR F YGKLSG+ + + + K+
Sbjct: 122 MLSMIGRLQDKGLAYQGTDG----DVNFAVRKFPGYGKLSGKSLDELQAGERVAVQDGKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P E++W S WG GRPGWHIECSAM C +LG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKPAEPEEVKWASPWGVGRPGWHIECSAMGCEMLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E +RFF+
Sbjct: 238 HHENEIAQSEGATGKPFSQVWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETVRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS+++LN A+ +L RLY A+ + +D N P A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSDVHLNDARGALKRLYTALSLVAPAEVA--VDWNHPAAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LF+LA +N++KS + A L+ L LGLL+ FL+
Sbjct: 356 GTPEAVAVLFELAAEVNRSKSAETAGLLKALAGCLGLLQGDPQAFLQ----------AGT 405
Query: 422 SENDI---KLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
SE D + +I R+ A+ K++ EAD+IR+ L+ GI+L+D P G T
Sbjct: 406 SEMDAGAIEAQIAARAAAKAAKDWAEADRIRKALLEQGIVLKDSPAGTT 454
>gi|260221171|emb|CBA29469.1| Cysteinyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 483
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/468 (50%), Positives = 322/468 (68%), Gaps = 19/468 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRI+N+ +R Q F PI PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ +
Sbjct: 27 SLRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGMQ 86
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT I A D LHI+PP +P AT Y+PQ
Sbjct: 87 VTYVRNITDIDDKIIRRAVERGITIRQLTDEMIAAMHADIGALHIEPPSVEPRATEYVPQ 146
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I +L GLAY+ +NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 147 MLSLIGELEAKGLAYRASNG----DVNYSVRKFEGYGKLSGK--SLDELRAGERVAVLDG 200
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W S +G GRPGWHIECSAMSC LG+ FDIHGGG DL+
Sbjct: 201 KEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGADLQ 260
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ N+WMH+GFV+++N+KMSKS GNF TIRD+L++Y+ E +RF
Sbjct: 261 FPHHENEIAQSEGAHGQALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVLRQYDAETVRF 320
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ + + ID + P A RF AM++
Sbjct: 321 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDIS--IDWSNPFAARFKAAMDE 378
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA +N++KS++ A L+ LG LGLL+ ++ +L++
Sbjct: 379 DFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQADANAYLQS--------GA 430
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ K+F AD IR++L+ GI+L+D G T
Sbjct: 431 GLDEATIQQRIADRAAAKAAKDFALADAIRKDLLAQGIVLKDSAAGTT 478
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/490 (48%), Positives = 328/490 (66%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYNS +R+K+ F PI PGKV +YVCG+T YD CH+GHAR+M+VFD+V R+LR + ++V
Sbjct: 2 LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + E+I+ LT+R+I+A ED+ L I PPD +P AT + I
Sbjct: 62 TYVRNITDIDDKIIRRAHERGENIQELTARYIEALHEDAEGLQILPPDREPRATESMEAI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ M+++L+ G AYQ NG D+ Y V +F YG LSG+ + + + + K D
Sbjct: 122 IAMVQRLLEQGYAYQGENG----DIYYDVSHFEGYGALSGKQLDELRAGERVQVSEAKTD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K N+P W+S WG GRPGWHIECSAMS LG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPNEPA---WDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A KFVNYWMH+GFV+++++KMSKS GNF T+R++L+ Y+PEV+R+FIL
Sbjct: 235 HENEIAQSEAATGCKFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLEHYHPEVLRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIP--------KINYKKIIDLNEPHAKRFI 354
SHYRS +NY+E L A+ ++ RLY A++ +P + + +++ + ++P +RF
Sbjct: 295 SSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEGDDPFVQRFC 354
Query: 355 IAMNDDFNTPVAISILFDLANIIN-------KNKSIKMAKQLRGLGNWLGLLEYSSDEFL 407
AM+DDFNTP A+++L ++ + +N K+K +A+ L LG LGLL ++FL
Sbjct: 355 EAMDDDFNTPEALALLNEIRHALNRAREEGDKDKVQYLARLLPSLGAILGLLTQEPEQFL 414
Query: 408 KNNIYTERKKNVN------YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
++ V+ S+ DI+ I R+ ARK K++ AD +R L GI LED
Sbjct: 415 RDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDVLKKQGITLED 474
Query: 462 MPNGKTEWRR 471
P G T WRR
Sbjct: 475 TPTG-TLWRR 483
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/475 (50%), Positives = 316/475 (66%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +RKK+ F P GKV +YVCG+T YDYCH+GHAR+M+VFD V R+ R Y++
Sbjct: 32 LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYEL 91
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT RFI A ED L + PPD +P AT I I
Sbjct: 92 TYVRNITDIDDKIIQRAIENGEDYGKLTERFIDAMHEDERALAVLPPDLEPRATQSIADI 151
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MI+ L+ LAY +NG DV Y+V F +YG+LSG+ L + + + K++
Sbjct: 152 ISMIKTLVDKDLAYVGSNG----DVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDLAKRN 207
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK++K N+P W+S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 208 PMDFVLWKMAKANEP---AWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPH 264
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA KFVN WMH+GFV+++++KMSKS GNF T+R++L +Y PE+IRFFIL
Sbjct: 265 HENEIAQSEGATGEKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYKPEIIRFFIL 324
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS+ LN AK +L RLY A++ + I E + RF AM+DDFN
Sbjct: 325 SSHYRSPLNYSDEQLNDAKAALTRLYTALRGVETTAEAAI---EEAYKTRFEQAMDDDFN 381
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TPVA+++LFDLA +NK K+ +A L+ L LG+L+ D FLK +
Sbjct: 382 TPVALAVLFDLARDLNKAKELDQQKACALAATLKYLSGLLGILQDDPDAFLKGS-----G 436
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E ++ +I R +A+K K++ ADKIR +L G+ILED P+G T WRR
Sbjct: 437 DAAVLGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILEDSPDGTTSWRR 491
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/472 (49%), Positives = 319/472 (67%), Gaps = 15/472 (3%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L +YN+ +R+K+ F PI PGKVS+YVCG+T YD CH+GHAR++ FD++ RWL+ +
Sbjct: 1 MIMLSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDV YVRNITDI+DKII A + + + L I ++D+ L + PP ++P AT+++
Sbjct: 61 YDVNYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
++ MIE+LI NG AY NGDV Y+VR F YGKLSGR + + E +
Sbjct: 121 GGMVAMIEQLIANGKAYP----AANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPN 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K P E W+S WG GRPGWHIECS MSC+ LG HFDIHGGG+DL+
Sbjct: 177 KRDPLDFVLWKAAK---PGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQ 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA+ H++VNYW+H+GF+ ++ +KMSKS GNF TIRD+L+ ++ EVIRF
Sbjct: 234 FPHHENEIAQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRF 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+RSHYRS +NY++ LN AK L RLY A++ I ++ ID N +A RF AM+D
Sbjct: 294 FIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGI-ELPTSDGIDWNHAYAARFKAAMDD 352
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF T A+++LF+LA +NK++ ++A+ L+ LG LGLL + FL+ +
Sbjct: 353 DFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGV-----GEG 407
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S ++ I R +AR K++ E+D+IR EL GI+LED G T WRR
Sbjct: 408 ELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAGG-TIWRR 458
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/469 (49%), Positives = 318/469 (67%), Gaps = 15/469 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F PI PGKVS+YVCG+T YD CH+GHAR++ FD++ RWL+ + YDV
Sbjct: 2 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDI+DKII A + + + L I ++D+ L + PP ++P AT+++ +
Sbjct: 62 NYVRNITDIEDKIIKRALERGITPEQLVEETIADMRQDAAALGLLPPTHEPRATHHVGGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+LI NG AY NGDV Y+VR F YGKLSGR + + E + K+D
Sbjct: 122 VAMIEQLIANGKAYP----AANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MSC+ LG HFDIHGGG+DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA+ H++VNYW+H+GF+ ++ +KMSKS GNF TIRD+L+ ++ EVIRFFI+
Sbjct: 235 HENEIAQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQHFDGEVIRFFIV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
RSHYRS +NY++ LN AK L RLY A++ I ++ ID N +A RF AM+DDF
Sbjct: 295 RSHYRSPVNYTDSILNDAKHGLTRLYTALRGI-ELPTSDGIDWNHAYAARFKAAMDDDFG 353
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
T A+++LF+LA +NK++ ++A+ L+ LG LGLL + FL+ + S
Sbjct: 354 TSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGV-----GEGELS 408
Query: 423 ENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ I R +AR K++ E+D+IR EL GI+LED G T WRR
Sbjct: 409 AEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLEDGAGG-TIWRR 456
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/482 (50%), Positives = 321/482 (66%), Gaps = 28/482 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F PI V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LNIYNTLTRQKEEFIPIDSKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT RFI+A ED+ L + PD +P AT ++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI++LI NG AY + NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 LGMIQRLIDNGKAYAAD----NGDVYYAVREFATYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYK-------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
HENEIAQS GA+ V YW+H+GF++++N+KMSKS GNF TIR++L
Sbjct: 235 HENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTIREVL 294
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
+KY+ EV+RFFILR+HYRS +NYS+ +LN AK +L RLY A+K+ P + + N+ +
Sbjct: 295 EKYDAEVVRFFILRAHYRSPLNYSDAHLNDAKGALTRLYTALKNTPPAEFAVNENAND-Y 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
+RF AMNDDF T AI++LF+LAN +NK S ++A L+ LG+ +GLL+ EFL+
Sbjct: 354 TRRFFAAMNDDFGTVEAIAVLFELANEVNKTNSNELAGCLKALGSIIGLLQRDPQEFLQG 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ S +I+ I R +AR KN+ E+D+IR L IILED G T W
Sbjct: 414 GSVSD-----GLSNEEIESLIEQRKQARAEKNWAESDRIRDLLNAENIILEDGAGGTT-W 467
Query: 470 RR 471
RR
Sbjct: 468 RR 469
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/475 (49%), Positives = 313/475 (65%), Gaps = 18/475 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYNS +R K+ F PI PG+ +YVCG+T YD CHLGHAR+++VFD+V R+L+ Y V
Sbjct: 2 LHIYNSLTRHKEPFVPIEPGRARMYVCGMTVYDLCHLGHARVLVVFDMVYRYLQQAGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + I LT RFI A ED+ L ++PP +P AT +I +I
Sbjct: 62 TYVRNITDIDDKIIARAAEQGIPIDQLTERFIAAMHEDAARLGVRPPTLEPRATAHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L M+++LI AY + G DV Y V +F YG+LSG+ + + K+D
Sbjct: 122 LAMVQRLIEREHAYVADKG----DVYYQVSSFSGYGRLSGKDPGDLRAGARVDVDQHKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKPGEPA---WESPWGPGRPGWHIECSAMSTQCLGNHFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
H+NEIAQSEGA FVN WMH+GFV+IN++KMSKS GNF T+R++L +Y PE IR+FIL
Sbjct: 235 HDNEIAQSEGATGEPFVNIWMHNGFVRINDEKMSKSLGNFFTVREILTRYRPEEIRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NY E L A+ +L RLY A++ +P D + H +RF AM+DDFN
Sbjct: 295 ASHYRSPLNYDESNLEQARSALTRLYTALRGLPAAEPAAEPDGGDAHRQRFTDAMDDDFN 354
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LFDLA IN+ +++ + +LR LG LGL++ +D+FL+ + +
Sbjct: 355 TPEALAVLFDLAREINRLRDSDLSRAAALGAELRSLGAVLGLVQDQADDFLRGGADAQPE 414
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ +I+ I R +AR+ K+F EAD+IR +L GI+LED G T WRR
Sbjct: 415 ---GPSDAEIENLIQRRVQARQDKDFAEADRIRDQLQQAGILLEDGAGG-TRWRR 465
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/488 (49%), Positives = 324/488 (66%), Gaps = 33/488 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+TL YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 1 MTTL--YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 58
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT I
Sbjct: 59 YPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENI 118
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 119 PQMIAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+
Sbjct: 175 KRDPLDFVLWKAAKAGEP---AWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 232 FPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 291
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 292 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPS 350
Query: 344 DLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSS 403
+ + + +RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+
Sbjct: 351 EAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDP 410
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
EFL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED
Sbjct: 411 TEFLQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTA 465
Query: 464 NGKTEWRR 471
G T WRR
Sbjct: 466 GGTT-WRR 472
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 322/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGVASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 321/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGVASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 322/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGVASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|121605784|ref|YP_983113.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
gi|187629840|sp|A1VRB4.1|SYC_POLNA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120594753|gb|ABM38192.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
Length = 463
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/473 (49%), Positives = 316/473 (66%), Gaps = 24/473 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG+V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ + Y+
Sbjct: 2 SLRIYNTLSRAVEDFSPLVPGQVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITDIDDKII A + +I+ LT I A +D L I+PP +P AT Y+PQ
Sbjct: 62 VRYVRNITDIDDKIIKRAVERGITIRALTDEMIAAMHQDIGALGIEPPTLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
+L MI KL GLAY+ ++G D+NY+VR F YGKLSG+ S + + E+
Sbjct: 122 MLAMIGKLEEKGLAYRGSSG----DMNYAVRKFPGYGKLSGK--SLDELRAGERVAVLEG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSK-----WGAGRPGWHIECSAMSCYLLGSHFDIHGG 234
K DPLDF LWK +K ++P + +W+S +G GRPGWHIECSAMSC LG FDIHGG
Sbjct: 176 KDDPLDFVLWKSAKESEPEDAKWDSAALGHDYGKGRPGWHIECSAMSCQTLGETFDIHGG 235
Query: 235 GQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP 294
G DL+FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+L+KY+
Sbjct: 236 GADLQFPHHENEIAQSEGANGKPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVLQKYDA 295
Query: 295 EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFI 354
E IRFFI+R+HYRS +NYS+ +L+ A+ SL RLY A+ + + ID +P A RF
Sbjct: 296 ETIRFFIIRAHYRSALNYSDAHLDDARNSLKRLYTALALVAPATVE--IDWADPFAARFK 353
Query: 355 IAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
AM++DF TP AI++LF+LA +NK S + A L+ LG LGLL+ +L
Sbjct: 354 AAMDEDFGTPEAIAVLFELAGEVNKTHSAERAGLLKSLGACLGLLQGEPSAYL------- 406
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ + I+ I R++A+K ++F AD+IR EL+ GI+L+D P G T
Sbjct: 407 -QAGAGLDDAAIQALITQRADAKKARDFAAADRIRTELLGQGIVLKDSPLGTT 458
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/475 (50%), Positives = 312/475 (65%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K F + PGKV +YVCG+T YDYCHLGHAR+++VFD+V R+L+ Y+V
Sbjct: 2 LHIYNTLTRRKDPFQSMEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ESI+ LT RFI+A ED+ L + P ++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESIEALTDRFIQAMHEDADALGVARPSFEPRATAHIHDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI L+ G AY +NG DV YSV F YGKLSG+ I + + K+D
Sbjct: 122 LHMIGTLLRRGFAYVGDNG----DVYYSVSLFDGYGKLSGKRIEDLRAGERVAPDESKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS + LG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPGEPA---WDSPWGPGRPGWHIECSAMSTHYLGHHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VNYWMH+GFV++N +KMSKS GNF T+R +L Y PE +R+FIL
Sbjct: 235 HENEIAQSEAASCEHYVNYWMHNGFVRVNEEKMSKSLGNFFTVRQVLAHYRPEEVRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS+ LN A+ +L RLY A++ + + + P RF AM DDFN
Sbjct: 295 GSHYRSPLNYSDEPLNNARAALNRLYTALRGVAPLPSEG---EGAPFRSRFDAAMQDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TPVA+S+LFD+A+ +N+ + ++A LR +G LG+L D +L+
Sbjct: 352 TPVALSVLFDIAHEVNRLRDSQPEAAGRLAGLLREMGGVLGILGSDPDAYLQGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E +I+ I R EAR+RK+F EAD+IR L G++LED P G T WRR
Sbjct: 406 AGEGPDEAEIQTLIEARLEARRRKDFAEADRIRDVLKEQGVVLEDGPGGTT-WRR 459
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/485 (50%), Positives = 319/485 (65%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LTIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 IAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 235 HENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P ++ + N
Sbjct: 295 EVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENAN 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AMNDDF T A+++LF+LA +NK + +A L+ LG +GLL+ EF
Sbjct: 355 D-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDVHLAGCLKALGGIIGLLQRDPTEF 413
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 414 LQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGT 468
Query: 467 TEWRR 471
T WRR
Sbjct: 469 T-WRR 472
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 321/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/485 (50%), Positives = 317/485 (65%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +RKK+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI NG AY NGDV Y+VR F YG+LSG+ + K E + FK+D
Sbjct: 122 IAMIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P ++ + N
Sbjct: 295 EVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENAN 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EF
Sbjct: 355 D-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPTEF 413
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ ++ S +I I R +AR KN+ E+D+IR L + IILED G
Sbjct: 414 LQGGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGT 468
Query: 467 TEWRR 471
T WRR
Sbjct: 469 T-WRR 472
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 320/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K++F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ E
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTE 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ + ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|332530126|ref|ZP_08406075.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
gi|332040396|gb|EGI76773.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
Length = 475
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/477 (51%), Positives = 322/477 (67%), Gaps = 20/477 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TLRIYN+ SR + F + PG V +YVCG+T YD CHLGHAR M+ FD+VQRWL+ + +
Sbjct: 2 TLRIYNTLSRALEPFVSLEPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKASGWR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A KN E+I+ LT R I A +D+ L IQ P ++P A +Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIQRALKNGETIRGLTDRMIAALHQDADALGIQRPTHEPRAMDYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQ--NNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN--- 177
+L +I +L GLAY+ G +GDVNYSVR F YGKLSG+ S + + E+
Sbjct: 122 MLDLIGQLERQGLAYRVPGQAGGASGDVNYSVRKFPGYGKLSGK--SLDELRAGERVAVL 179
Query: 178 NFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
+ K+DPLDF LWK +K ++P E +W S +GAGRPGWHIECSAMSC LLG FDIHGGG D
Sbjct: 180 DGKQDPLDFVLWKSAKADEPAEAQWQSPYGAGRPGWHIECSAMSCALLGESFDIHGGGAD 239
Query: 238 LKFPHHENEIAQSEGA------YKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK 291
L+FPHHENEIAQSEGA YWMH+GFV+++N+KMSKS GNF TIR++L+K
Sbjct: 240 LQFPHHENEIAQSEGAKIGAANEGQPMARYWMHNGFVRVDNEKMSKSLGNFFTIREVLQK 299
Query: 292 YNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK-KIIDLNEPHA 350
Y+ + +RFFILR+HYRS +NY + +L+ A+ +L RLY A++ P + +D E HA
Sbjct: 300 YDAQTVRFFILRAHYRSPLNYGDAHLDDARSALKRLYTALQATPPAPMAPQTVDWTEGHA 359
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
RF AM++DF TP A+++LFDLA +NK S ++A L+ LG LGLL+ FL++
Sbjct: 360 ARFKAAMDEDFGTPEAVAVLFDLATEVNKTGSARLAALLKALGGCLGLLQEDPVAFLQSG 419
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ + I I R+ A+ KNF EAD+IRQEL+ GI+L+D P G T
Sbjct: 420 ------ASAALDASAIDSLIAQRAAAKAAKNFAEADRIRQELLAQGIVLKDAPTGTT 470
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 320/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/483 (49%), Positives = 317/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDVEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIEALIRNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIRD+
Sbjct: 237 NEIAQSVGASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PE++RFFILR+HYRS +NYS+ +L+ AK +L RLY + ++P + ++ + N+
Sbjct: 297 LKQYDPEIVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLANVPPVEFQVASEAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF+T A+++LF+LA NK +S +++ L+ L +GLL+ + EFL+
Sbjct: 356 YTRRFFAAMNDDFDTVQAVAVLFELAGEANKTQSAELSGCLKALAGTIGLLQRNPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
S +I+ I R +AR KN+ E+D+IR L GI L D +G T
Sbjct: 416 GGATAN-----GLSNEEIEALIARRKQARADKNWAESDRIRDLLAEQGITLRDGADG-TS 469
Query: 469 WRR 471
W R
Sbjct: 470 WTR 472
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|296134921|ref|YP_003642163.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
gi|295795043|gb|ADG29833.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
Length = 460
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/471 (50%), Positives = 319/471 (67%), Gaps = 14/471 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ L ++N+ +R K F PI PG V +YVCG+T YDYCH+GHAR+M+VFD++QRWL+
Sbjct: 1 MTALHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
VTYVRNITDIDDKII A++N E+I+ LT RFI A ED+ L ++ P ++P AT+Y+
Sbjct: 61 LRVTYVRNITDIDDKIIRRAQENGETIRALTDRFIAAMHEDADALGVERPTHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL GLAY+++ G DVN+ VR F YGKLSG+ + + E +
Sbjct: 121 PQMLDLIGKLKTRGLAYRDSAG----DVNFHVRAFPGYGKLSGKSLDELRAGERVEVDTA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E++W S G GRPGWHIECSAMSC LLG FDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA N W+H+GFV+++ +KMSKS GNF TIRD+L+ + E +R
Sbjct: 237 FPHHENEIAQSEGASGKPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDILQHVDAETVRL 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L A +L RLY A+ P + +D + P A+ F AMND
Sbjct: 297 FIVRAHYRSPLNYSDEHLQDAHAALTRLYTALD--PFADLPARLDWSHPRAQAFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTP A+++LF+LA +NK +A L+GLG LGLL+ + EFL++ +
Sbjct: 355 DLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAAA---VDA 411
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ E ++ +I A++ +NF EAD+IR EL GI+LED P G T WR
Sbjct: 412 AWVEQLVQERI----AAKQARNFAEADRIRAELSAKGIVLEDKPGGITVWR 458
>gi|410692434|ref|YP_003623055.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Thiomonas sp. 3As]
gi|294338858|emb|CAZ87192.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Thiomonas sp. 3As]
Length = 460
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/471 (50%), Positives = 319/471 (67%), Gaps = 14/471 (2%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ L ++N+ +R K F PI PG V +YVCG+T YDYCH+GHAR+M+VFD++QRWL+
Sbjct: 1 MTALHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
VTYVRNITDIDDKII A+ N E+I+ LT RFI A ED+ L ++ P ++P AT+Y+
Sbjct: 61 LRVTYVRNITDIDDKIIRRAQDNGETIRALTDRFIAAMHEDADALGVERPTHEPRATDYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL GLAY+++ G DVN+ VR F YGKLSG+ + + E +
Sbjct: 121 PQMLDLIGKLKTRGLAYRDSAG----DVNFHVRAFPGYGKLSGKSLDELRAGERVEVDTA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E++W S G GRPGWHIECSAMSC LLG FDIHGGG DL+
Sbjct: 177 KQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA N W+H+GFV+++ +KMSKS GNF TIRD+L+ + E +R
Sbjct: 237 FPHHENEIAQSEGASGKPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDILQHVDAETVRL 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L A +L RLY A+ ++ + +D + P A+ F AMND
Sbjct: 297 FIVRAHYRSPLNYSDEHLQDAHAALTRLYTALDPFAELPAR--LDWSHPRAQAFAAAMND 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
D NTP A+++LF+LA +NK +A L+GLG LGLL+ + EFL++ +
Sbjct: 355 DLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAAA---VDA 411
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ E ++ +I A++ +NF EAD+IR EL GI+LED P G T WR
Sbjct: 412 AWVEQLVQARI----AAKQARNFAEADRIRAELSAKGIVLEDKPGGITVWR 458
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/485 (49%), Positives = 315/485 (64%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 23 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 82
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI A ED+ L + PD +P AT IPQ+
Sbjct: 83 TYVRNITDIDDKIIARAAENGETIGELTARFIAAMHEDADALGVLRPDLEPKATENIPQM 142
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI G AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 143 IAMIESLIQKGKAYP----AANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGFKRD 198
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 199 PLDFVLWKAAKAGEP---AWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 255
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 256 HENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 315
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
D+LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY A+K+ P + + +
Sbjct: 316 DVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTPPAGF-ALSETA 374
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ +RF AMNDDF T A+++LF+LA +NK + ++ L+ LG +GLL+ EF
Sbjct: 375 NNYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTRDAALSGCLKALGGIIGLLQRDPTEF 434
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ ++ S +I+ I R +AR KN+ E+D+IR L IILED G
Sbjct: 435 LQGGTASD-----GLSNEEIENLIAMRKQARADKNWAESDRIRDLLTAQNIILEDSA-GI 488
Query: 467 TEWRR 471
T WRR
Sbjct: 489 TTWRR 493
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREYGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P ++ + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFELSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK + +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDVHLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 319/482 (66%), Gaps = 31/482 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TYV
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 64
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++ M
Sbjct: 65 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 124
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLD 185
IE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPLD
Sbjct: 125 IETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLD 180
Query: 186 FALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHEN 245
F LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHEN
Sbjct: 181 FVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHEN 237
Query: 246 EIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
EIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++L
Sbjct: 238 EIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 297
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
K+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + + +
Sbjct: 298 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDDY 356
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
+RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 357 TRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQG 416
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ S +I I R +AR KN+ E+D+IR L + IILED G T W
Sbjct: 417 GAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTAGGTT-W 470
Query: 470 RR 471
RR
Sbjct: 471 RR 472
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 319/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ E
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTE 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ + ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|171058353|ref|YP_001790702.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
gi|170775798|gb|ACB33937.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
Length = 457
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/467 (50%), Positives = 309/467 (66%), Gaps = 17/467 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RI+NS SR+ + F I PG V +YVCG+T YD CH+GHAR+M+ FD+V RWLR + + V
Sbjct: 1 MRIHNSLSRELETFKSIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVYRWLRASGWRV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + +I+ LT I A D L I+ P ++P AT YIPQ+
Sbjct: 61 TYVRNITDIDDKIIRRAVERGITIRQLTDEMIDAMHRDIGALGIERPTHEPRATEYIPQM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L MI L GLAY++ NG DVNY+VR F YGKLSG+ S + + E+ + K
Sbjct: 121 LSMISTLESKGLAYRSGNG----DVNYAVRRFEGYGKLSGK--SLDQLRAGERVAVADGK 174
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +++S +G GRPGWHIECSAMSC LLG FDIHGGG DL+F
Sbjct: 175 EDPLDFVLWKSAKPQEPDDAKYDSPYGPGRPGWHIECSAMSCALLGETFDIHGGGLDLQF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA H +V WMH+GF+ ++N+KMSKS GNF TIRD+LK Y+ E +RFF
Sbjct: 235 PHHENEIAQSEGALGHSWVPTWMHNGFLNVDNEKMSKSLGNFFTIRDVLKSYDGETVRFF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
+LR YRS N+S+ L+ A+ SL RLY A+ + ++ ID P A RF AM+DD
Sbjct: 295 MLRVQYRSPFNFSDAGLDDARSSLTRLYTALDGV-AVDDASEIDWTHPAAARFKAAMDDD 353
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNTP+A+S+LFDLA +N+NK A L+ LG LG+L+ S FL+ +
Sbjct: 354 FNTPIAVSVLFDLAGEVNRNKDAGTAGLLKRLGAVLGVLQQSPRTFLQGD-------TGG 406
Query: 421 YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R A+ +NF EAD+IR L GI L+D P G T
Sbjct: 407 LDEAHIQQQIGERQAAKAARNFAEADRIRLALAAQGITLKDTPQGTT 453
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 177
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 178 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 237
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 238 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 293
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 294 DFVLWKAAKAGEPA---WESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 350
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 351 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 410
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 411 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 469
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A +L+ LG +GLL+ EFL+
Sbjct: 470 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQRDPTEFLQ 529
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 530 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 583
Query: 469 WRR 471
WRR
Sbjct: 584 WRR 586
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 319/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ E
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTE 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ + ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 319/482 (66%), Gaps = 31/482 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TYV
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 74
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++ M
Sbjct: 75 RNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIAM 134
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLD 185
IE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPLD
Sbjct: 135 IETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLD 190
Query: 186 FALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHEN 245
F LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHEN
Sbjct: 191 FVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHEN 247
Query: 246 EIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
EIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++L
Sbjct: 248 EIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREVL 307
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
K+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + + +
Sbjct: 308 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDDY 366
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
+RF +AMNDDF+T A+++LF+LA +NK + ++A +L+ LG +GLL+ EFL+
Sbjct: 367 TRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRDPTEFLQG 426
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ S +I I R +AR KN+ E+D+IR L + IILED G T W
Sbjct: 427 GAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTAGGTT-W 480
Query: 470 RR 471
RR
Sbjct: 481 RR 482
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 320/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + ++
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEADDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/482 (50%), Positives = 321/482 (66%), Gaps = 28/482 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LNIYNTLTRQKEEFIPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT RFI+A ED+ L + PD +P AT ++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTERFIRAMNEDAAALGVIRPDVEPKATEHVQQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI++LI NG AY + NGDV Y+VR F YG+LSG+ + + E ++FK+D
Sbjct: 122 LGMIQRLIDNGKAYAAD----NGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDSFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYK-------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
HENEIAQS GA+ V YW+H+GF++++N+KMSKS GNF TI ++L
Sbjct: 235 HENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKMSKSLGNFFTICEVL 294
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
+KY+ EV+RFFILR+HYRS +NYS+ +L+ AK +L RLY A+K+ P + + N+ +
Sbjct: 295 EKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPAEFAVSENAND-Y 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
+RF +MNDDF T A+++LF+LAN +NK S ++A L+ LG +GLL+ EFL+
Sbjct: 354 TRRFFASMNDDFGTVEAMAVLFELANEVNKTNSTELAGCLKALGGVIGLLQRDPLEFLQG 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ S +I+ I R +AR KN+ E+D+IR L IILED G T W
Sbjct: 414 GSVSD-----GLSNEEIESLIAQRKQARAEKNWAESDRIRDLLNAENIILEDGAGGTT-W 467
Query: 470 RR 471
RR
Sbjct: 468 RR 469
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + ++
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEADDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/491 (49%), Positives = 322/491 (65%), Gaps = 31/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYNS +R+K+ F PI GKV +YVCG+T YD CH+GHAR+M+VFD+V R+LR + ++V
Sbjct: 2 LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + ESI TLT+R+I+A ED L I PPD +P AT + I
Sbjct: 62 IYVRNITDIDDKIIHRANERGESIHTLTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L M+ +L+ G AYQ NG D+ Y V +F YG LSGR + + + N K D
Sbjct: 122 LAMVRQLLDQGYAYQGENG----DIYYDVSHFEGYGALSGRHLEDLRAGERVQVNEAKTD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K+ +P W S WG GRPGWHIECSAMS LG+HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKSGEPA---WESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A KFVNYWMH+GFV++N++KMSKS GNF T+R++L+ Y+PEV+R+FIL
Sbjct: 235 HENEIAQSEAATGGKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLEHYHPEVLRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK--------KIIDLNEPHAKRFI 354
SHYRS +NY++ L+ AK ++ RLY A++ IP+ + + D +P RF
Sbjct: 295 SSHYRSPLNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTDGGDPFVLRFR 354
Query: 355 IAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFL 407
AM+DDFNTP A+++L ++ + +N+ K +A LR LG LGLL + ++FL
Sbjct: 355 EAMDDDFNTPEALALLNEVRHALNRAREAGDTEKGQSLAVLLRSLGGILGLLAHEPEQFL 414
Query: 408 KNNIY-------TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
+++ + S + I+ + R+ ARK K++ EAD+IR L + GI LE
Sbjct: 415 RDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRGILKDQGITLE 474
Query: 461 DMPNGKTEWRR 471
D G T WRR
Sbjct: 475 DTAAG-TLWRR 484
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENVND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/479 (49%), Positives = 318/479 (66%), Gaps = 27/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K+ F PI P KV +YVCG+T YDYCHLGHAR+M+VFD+V R+LR Y+V
Sbjct: 2 LQIHNSLTRRKEPFEPIEPRKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A + ES++ LT RFI+A EDS L I PP +P AT ++ +I
Sbjct: 62 TYIRNITDIDDKIIRRAAEAGESMQALTDRFIQAMHEDSDALGILPPTDEPRATAHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
L MI LI GLAY NG DV Y+V F YGKLSG+ L + +++E
Sbjct: 122 LAMIGTLIEKGLAYVAENG----DVYYAVARFAGYGKLSGKDPQDLRAGARVEVDEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+
Sbjct: 175 KRDPLDFALWKSAKPGEPA---WDSPWGPGRPGWHIECSAMSTCALGHHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N +KMSKS GNF T+R++L+++ PE +R+
Sbjct: 232 FPHHENEIAQSEGATGETFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRFRPEEVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKI-IDLNEPHAKRFIIAMN 358
FIL S YRS +NY + +L A+ +L RLY A++ +P + + + P +RF AM+
Sbjct: 292 FILTSQYRSPLNYDDEHLEQARAALTRLYTALRGVPDVAPDAVDASVAAPFVERFHAAMD 351
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+++LFDL +N+ ++ LR LG LG+L+ D +L+
Sbjct: 352 DDFNTPEALAVLFDLVREVNRIRADDPGAAAGPAAVLRRLGGILGILQEDPDLYLRG--- 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
R + S+ +I+ + R AR K++ EAD++R+ L GI LED P+G T WRR
Sbjct: 409 --RADDGGLSDTEIESLVQARIAARAAKDWAEADRLRKLLTEAGIGLEDGPSG-TAWRR 464
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 317/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENVND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 320/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK + ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++ + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFELSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/485 (49%), Positives = 314/485 (64%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI A ED+ L + PD +P AT I ++
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGDLTARFIAAMHEDADALGVLRPDLEPKATENIAEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 IAMIENLIARDKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSEKLFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 235 HENEIAQSVGASGHACGHDHAVTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
D+LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY A+K P + + N
Sbjct: 295 DVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKHTPPAEFALSENAN 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AMNDDF T A+++LF+LA +NK +S ++A L+ LG +GLL+ EF
Sbjct: 355 D-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTQSAELAGCLKALGGIIGLLQRDPTEF 413
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ + S +++ I R +AR KN+ E+D+IR L IILED G
Sbjct: 414 LQGGAVAD-----GLSNEEVEALIAQRKQARADKNWAESDRIRDLLTAQNIILEDGAGG- 467
Query: 467 TEWRR 471
T WRR
Sbjct: 468 TSWRR 472
>gi|239816065|ref|YP_002944975.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
gi|259511846|sp|C5CPX0.1|SYC_VARPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239802642|gb|ACS19709.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
Length = 459
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/466 (51%), Positives = 318/466 (68%), Gaps = 14/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR+ + F P+ PG+V +YVCG+T YD CHLGHAR MI FD+VQRWL+ +
Sbjct: 2 SLRIYNTLSRELEEFSPLQPGRVRMYVCGMTVYDLCHLGHARSMIAFDLVQRWLKASGLA 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A ED+ L I+ P ++P AT+YIPQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHEDADALGIERPTHEPRATDYIPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAY+ NG DVNY+VR F YGKLSG+ I + + + K
Sbjct: 122 MLSMIGTLEKKGLAYRAENG----DVNYAVRKFPGYGKLSGKSIDELHAGERVAVLDGKD 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLD LWK +K ++P E++W S++G GRPGWHIECSAM+C LLG DIHGGG+DL+FP
Sbjct: 178 DPLDPVLWKSAKPSEPEEVKWASEFGPGRPGWHIECSAMACELLGETLDIHGGGEDLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA NYWMH+GF+ +N+KMSKS GNF IRD+LKKY+ E IRFF+
Sbjct: 238 HHENEIAQSEGATGKPLANYWMHNGFIVTDNEKMSKSLGNFFLIRDVLKKYDAETIRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+R+HYR +NYS+++L+ A+ SL RLY ++ D+ ID N+P+A RF AM++DF
Sbjct: 298 VRAHYRRPLNYSDVHLDDARASLKRLYTSL-DLVAPQALAAIDWNDPYAARFKAAMDEDF 356
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N+ +S A L+ LG L +L+ FL +
Sbjct: 357 ATPEAVAVLFDLAGEVNRTQSPAQAGLLKALGGCLNILQDDPKRFL--------RAGTTL 408
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ KNF EAD+IR +L+ GI+L+D P G T
Sbjct: 409 DEATIQAQIDARAAAKAAKNFAEADRIRNDLLAQGIVLKDSPTGTT 454
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 317/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKATKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A +L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|89900143|ref|YP_522614.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
gi|89344880|gb|ABD69083.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
Length = 470
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/473 (49%), Positives = 312/473 (65%), Gaps = 19/473 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWL+++
Sbjct: 13 SLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGLR 72
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN+TDIDDKII A +N ESI+ LT R + A +D+ L I+ P ++P AT ++PQ
Sbjct: 73 VTYVRNVTDIDDKIIKRALENGESIRALTERMVDALHQDADALGIERPTHEPRATEFVPQ 132
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I +L GLAYQ +NGDVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 133 MLSLIGRLEQKGLAYQ----AVNGDVNYAVRKFPGYGKLSGK--SLDELRAGERVAVADG 186
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K N+P + +W+S +G GRPGWHIECSAM +LG DIHGGG DL+
Sbjct: 187 KDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGADLQ 246
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA + WMH+GFV +N+KMSKS GNF TIRD+L +Y+ E RF
Sbjct: 247 FPHHENEIAQSEGATGKPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILARYDAETTRF 306
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +N+S+ +L+ A+ SL RLY A+ D+ ID +P A RF AM++
Sbjct: 307 FIIRAHYRSALNHSDAHLDDARNSLKRLYTAL-DLVAPEPLLEIDWRQPFAARFKAAMDE 365
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A++++F+LA +NK + K+A L+ LG LGLL+ FL +
Sbjct: 366 DFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFL--------QAGA 417
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I I R+ A+ KNF EAD+IRQ+L+ GI+L+D G T W +
Sbjct: 418 TLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAG-TVWEVV 469
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + ++
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEADDD 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/487 (49%), Positives = 324/487 (66%), Gaps = 30/487 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L +YN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+++VFD++ RWLR +
Sbjct: 1 MPNLTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I+ LT+RFI A EDS L +Q PD +P AT +I
Sbjct: 61 YPLTYVRNITDIDDKIIARANENGETIQQLTARFIAAMNEDSDALGVQRPDVEPKATEHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
Q++ MIE+LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 121 AQMIAMIEQLIANGKAYS----AANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDGF 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P+ W S WG GRPGWHIECSAM L G FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKAAKPEEPH---WQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQ 233
Query: 240 FPHHENEIAQSEGAY-----------KHK----FVNYWMHSGFVKINNKKMSKSFGNFCT 284
FPHHENEIAQS GA+ HK V YW+H+GF++++N+KMSKS GNF T
Sbjct: 234 FPHHENEIAQSCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFT 293
Query: 285 IRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID 344
IRD+LKKY+ EV+RFFILR+HYRS +NYS+ +L+ AK SL LY A+ ++ +
Sbjct: 294 IRDVLKKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFTLSEH 353
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSD 404
N+ + +RF AM+DDF+T A+++LF+LA +NK +S +++ L+ L LGLL+
Sbjct: 354 AND-YTRRFYAAMDDDFDTVKAVAVLFELAKEVNKTQSAELSGCLKALAGVLGLLQREPH 412
Query: 405 EFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPN 464
EFL++ + S + I+ I R+ AR KN+ E+D+IR EL G++L D
Sbjct: 413 EFLQSG-----APDNGLSADAIEALIAQRNLARANKNWAESDRIRDELAAQGVVLRDA-G 466
Query: 465 GKTEWRR 471
G+T W R
Sbjct: 467 GETTWTR 473
>gi|241764153|ref|ZP_04762188.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
gi|241366490|gb|EER60990.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
Length = 459
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/468 (50%), Positives = 316/468 (67%), Gaps = 18/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ +
Sbjct: 2 SLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT I A +D L I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRALERGITIRQLTDEMIAAMHQDIGALGIEPPAVEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I +L GLAY+ NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGQLEGKGLAYRATNG----DVNYSVRKFAGYGKLSGK--SLDELRAGERVAVQDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S +G GRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KEDPLDFVLWKSAKPEEPPEAKWDSPFGTGRPGWHIECSAMSCATLGETFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+L++Y+ E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVLQQYDAETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ + ID +P+A RF AM++
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPSEVAS-IDWADPYAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP AI++LFDLA+ +NK +S ++A L+ L LGLL+ FL +
Sbjct: 355 DFGTPEAIAVLFDLASEVNKTRSPQLAGLLKALAGCLGLLQGDPQAFL--------QAGA 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ E I+ +I R+ A+ K+F EAD+IR L+ GI+L+D G T
Sbjct: 407 GFDEAAIQAQIAARAAAKAGKDFAEADRIRNALLAQGIVLKDSAAGTT 454
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++N+
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENVND- 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/487 (50%), Positives = 320/487 (65%), Gaps = 29/487 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P GKV +YVCG+T YDYCH+GHAR+M+VFD V R+ R YD+
Sbjct: 2 LKIYNTLTRRKETFKPRIEGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT+RFI A ED L + PPD +P AT I I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDFNRLTARFIDAMHEDERALAVLPPDIEPRATQSIASI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE L+ G AY ++G DV Y+V F +YGKLSG+ + + + + K++
Sbjct: 122 IAMIEALLAKGYAYIGSSG----DVFYAVEKFRDYGKLSGKKLEELQAGERVDVDAAKQN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK++K N+P W + WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PFDFVLWKMAKANEP---SWPAPWGDGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA KFVN WMH+GFV++N +KMSKS GNF T+R++LK+Y PE+IRFFIL
Sbjct: 235 HENEIAQSEGATGEKFVNLWMHNGFVRVNEEKMSKSLGNFFTVREVLKQYRPEIIRFFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS+ LN + +L RLY A + + + + D + RF AMNDDFN
Sbjct: 295 SSHYRSPLNYSDEQLNESATALNRLYTAQRGVTAPDAPILPD----YRGRFEQAMNDDFN 350
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYT--- 413
TPVA+S+LFDLA +NK K+ + A L+ LG LG+L+ + +LK+ +
Sbjct: 351 TPVAVSVLFDLARELNKAKTKDVEQAGQFAASLKQLGGLLGILQDDPEAWLKSGAFHSAV 410
Query: 414 -ERKKNVNYSEND-------IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
E ++ D I+ +I R +A+K K++ AD+IR +L GIILED PNG
Sbjct: 411 YESATAGDWVSADVMRGDVWIERQIQARLDAKKAKSWALADQIRNQLKEQGIILEDAPNG 470
Query: 466 KTEWRRI 472
T WRR+
Sbjct: 471 TTNWRRV 477
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P ++ + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAFELSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|109894929|sp|Q21YS0.2|SYC_RHOFD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 459
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/473 (49%), Positives = 312/473 (65%), Gaps = 19/473 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + P+ PG V +YVCG+T YD CHLGHAR M+ FD+VQRWL+++
Sbjct: 2 SLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN+TDIDDKII A +N ESI+ LT R + A +D+ L I+ P ++P AT ++PQ
Sbjct: 62 VTYVRNVTDIDDKIIKRALENGESIRALTERMVDALHQDADALGIERPTHEPRATEFVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I +L GLAYQ +NGDVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGRLEQKGLAYQ----AVNGDVNYAVRKFPGYGKLSGK--SLDELRAGERVAVADG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K N+P + +W+S +G GRPGWHIECSAM +LG DIHGGG DL+
Sbjct: 176 KDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA + WMH+GFV +N+KMSKS GNF TIRD+L +Y+ E RF
Sbjct: 236 FPHHENEIAQSEGATGKPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILARYDAETTRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +N+S+ +L+ A+ SL RLY A+ D+ ID +P A RF AM++
Sbjct: 296 FIIRAHYRSALNHSDAHLDDARNSLKRLYTAL-DLVAPEPLLEIDWRQPFAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A++++F+LA +NK + K+A L+ LG LGLL+ FL +
Sbjct: 355 DFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFL--------QAGA 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I I R+ A+ KNF EAD+IRQ+L+ GI+L+D G T W +
Sbjct: 407 TLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAG-TVWEVV 458
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++N+
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENVND- 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/485 (50%), Positives = 317/485 (65%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +
Sbjct: 2 LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 IAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 235 HENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + ++N
Sbjct: 295 EVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAKFDLFENVN 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EF
Sbjct: 355 D-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPIEF 413
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ ++ S +I I R +AR KN+ E+D+IR L + IILED G
Sbjct: 414 LQGGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGT 468
Query: 467 TEWRR 471
T WRR
Sbjct: 469 T-WRR 472
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/478 (50%), Positives = 324/478 (67%), Gaps = 28/478 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K +F PI PGKV +YVCG+T YDYCHLGHAR+M+VFD+V R+LR Y V
Sbjct: 2 LQIHNSLTRQKDVFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ + LT RFI+A +ED L + PP +P AT ++ +I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGETFQELTERFIQAMREDGDALGVLPPSQEPRATGHMSEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
L M+E L+ G+AY +NG DV Y+V F YGKLSG+ L + +I E
Sbjct: 122 LAMVETLVDKGMAYVADNG----DVYYAVGQFTGYGKLSGKDPQDLRAGARVEIGES--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KRDPLDFALWKSAKPGEPA---WESPWGMGRPGWHIECSAMSTCCLGNHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N +KMSKS GNF T+R++L++Y E +R+
Sbjct: 232 FPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYQAEEVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NY + L A+ +L RLY A++ +P++ E + +RF AM+D
Sbjct: 292 FILTSHYRSPLNYDDENLQNARGALTRLYTALRGLPEVEPA----FGETYRERFSAAMDD 347
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTPVA+++LFDL IN+ + MA+ +LR LG LG+L+ ++ +L+ +
Sbjct: 348 DFNTPVALAVLFDLVREINRVRPTDMARAAALGAELRRLGEMLGILQGDAEVYLRGGPSS 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S+ I+ I R++AR +++ AD+IR+EL + G+ L+D P G T WRR
Sbjct: 408 TED---DLSDARIEALIQERTQARADRDWAAADRIRKELADAGVQLDDGPQGTT-WRR 461
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/488 (49%), Positives = 317/488 (64%), Gaps = 31/488 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 1 MNMTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT I
Sbjct: 61 YPLTYVRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 121 PQMIAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 233
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 234 FPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 293
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 294 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFGLSE 353
Query: 344 DLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSS 403
+ N+ + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+
Sbjct: 354 NAND-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDP 412
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
EFL+ ++ S +I I R +AR KN+ E+D+IR L + IILED
Sbjct: 413 IEFLQGGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNA 467
Query: 464 NGKTEWRR 471
G T WRR
Sbjct: 468 GGTT-WRR 474
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 318/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 578
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ E
Sbjct: 579 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTE 638
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 639 FLQGGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 693
Query: 466 KTEWRR 471
T WRR
Sbjct: 694 TT-WRR 698
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/475 (50%), Positives = 311/475 (65%), Gaps = 21/475 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S + IYN+ +R+K+ F P+ GKVS+YVCG+T YDYCHLGHAR+M+ FDI+ R+LR Y
Sbjct: 3 SHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDIITRYLRERGY 62
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DV YVRNITDIDDKI+ A +N ESI LT R I A ED L + PP ++P AT +I
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHIE 122
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFK 180
I+ MIE LI G AY +NG DV Y VR F NYGKL+ R + + + + K
Sbjct: 123 DIVAMIETLIEKGFAYAADNG----DVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHK 178
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 179 EDPLDFVLWKAAK---PGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIRD+L +++PEV+RF
Sbjct: 236 PHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFL 295
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ SHYRS INYS L A+KSL RLY A++ + + D + +RF M+DD
Sbjct: 296 LVASHYRSPINYSVDSLTEARKSLTRLYTALEGLEPGEANR--DAASAYRERFTQVMDDD 353
Query: 361 FNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A++++F+LA +N+ K + KMA +L+ LG+ LGLL+ FLK
Sbjct: 354 FNTPEALAVMFELAREVNRAKQDQPVEAAKMAGELKQLGSILGLLQQVPQTFLKGT---- 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+++ + SE++I+ KI R EA+ K+F +AD IR EL GIIL+D G T W
Sbjct: 410 QQQGMPLSESEIEAKIAQRIEAKTNKDFAQADAIRDELAAMGIILKDSREG-TSW 463
>gi|222111282|ref|YP_002553546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
gi|254781677|sp|B9MAU5.1|SYC_ACIET RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221730726|gb|ACM33546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
Length = 458
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/466 (51%), Positives = 314/466 (67%), Gaps = 15/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F PI PG V +YVCG+T YD CHLGHAR MI FD+VQRWLR +
Sbjct: 2 SLRIYNTLSRALEEFSPIEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGLA 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A +D+ L I+ P ++P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRAVENGETIRSLTDRMIDALHQDADALGIERPTHEPRATAYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAYQ NG DVNY+VR F YGKLSG+ + N + + K
Sbjct: 122 MLDMIGTLQGKGLAYQAGNG----DVNYAVRKFPGYGKLSGKSLDELNAGERVAVQDGKH 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P +++W S +G GRPGWHIECSAM C LLG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGADLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E +RFF+
Sbjct: 238 HHENEIAQSEGATGKPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETVRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS ++L+ A+ +L RLY A+ + + +D E +A RF AM++DF
Sbjct: 298 VRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVE--VDWAEGYAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N++KS A L+ LG LGLL+ +FL K
Sbjct: 356 GTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGRHLGLLQADPQDFL--------KAGAGL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ KNF EAD+IR +L+ GI+L+D G T
Sbjct: 408 DEAAIQAQIAARAAAKAAKNFAEADRIRNDLLAQGIVLKDSATGTT 453
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 318/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+ E
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPIE 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 317/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK + +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDVHLAGCLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/475 (50%), Positives = 316/475 (66%), Gaps = 21/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K F PI KV +YVCG+T YDYCH+GHAR+M+VFD+V RWLR + YDV
Sbjct: 2 LTIYNTLTKDKAPFKPIEANKVRMYVCGMTVYDYCHVGHARVMVVFDMVARWLRASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N E I +LT RFI+A ED+ L + PD +P AT YI I
Sbjct: 62 TYIRNITDIDDKIINRANENGEDIYSLTERFIQAMYEDADALGVLRPDQEPRATQYIDHI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ +I +L+ G AY NNG DV Y+V F YGKLSG+ I + + K+D
Sbjct: 122 IDLITRLMKRGYAYTANNG----DVYYAVGKFAEYGKLSGKRIEDLRAGERVDIEEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K N+P W S WG GRPGWHIECSAMS + LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKPNEP---SWASPWGNGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA +FVN WMH+GFV++N +KMSKS GNF T+RD+L+K+ EVIR+FIL
Sbjct: 235 HENEIAQSEGATGEQFVNVWMHNGFVRVNEEKMSKSLGNFFTLRDVLQKFPAEVIRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NY + L+ A+++L RLY A++ + +D N +RF AMNDDFN
Sbjct: 295 NSHYRSPLNYGDQQLDAAQQALTRLYTALRGLEDTGAP--LDKNSEFYQRFATAMNDDFN 352
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
T AI++LFDL+ +N+ ++++ +A+QL+ LG LG+L+ + + K E
Sbjct: 353 TAEAIAVLFDLSREVNRLRVDNSSQAVAVAQQLKLLGGILGILQADPEAWFKR----ENT 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S + ++ I R ARK KN+ E+D+IR L GIILED G T WRR
Sbjct: 409 STNGLSNDAVEKLIAERQAARKAKNWAESDRIRDMLKEQGIILEDAA-GVTTWRR 462
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 319/483 (66%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYLLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + ++
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEADDD 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAASD-----GLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/481 (50%), Positives = 318/481 (66%), Gaps = 27/481 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+M+VFDI+ RWLR Y +
Sbjct: 2 LTVYNTLTRQKEQFVPLNPQNVRMYVCGMTVYDYCHLGHARVMVVFDIIARWLRQCGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT ++ Q+
Sbjct: 62 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMNEDAAALGVIRPDVEPKATEHVRQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI++LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 LAMIQRLIDNGKAYPAE----NGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PSEPAWESPWGQGRPGWHIECSAMSEELFGDTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYK------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK 290
HENEIAQS GA+ V YW+H+GF++++ +KMSKS GNF TIRD+LK
Sbjct: 235 HENEIAQSCGAHGGSCGHNHGGKTIESHVKYWLHNGFIRVDGEKMSKSLGNFFTIRDVLK 294
Query: 291 KYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA 350
Y+ EV+RFFILR+HYRS +NYS+ +L+ AK +L RLY A+K+ P + N+ +
Sbjct: 295 AYDAEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPAECAVSENTND-YT 353
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
+RF AMNDDF T A+ +LF+LAN +NK + ++A L+ L + +GLLE EFL+
Sbjct: 354 RRFFAAMNDDFGTVEAVVVLFELANEVNKTNNAELAGCLKALSSIIGLLERDPLEFLQGC 413
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + S +I+ I R +AR KN+ E+D+IR L IILED NG T WR
Sbjct: 414 -----AASGSLSNEEIENLIAQRKQARAEKNWAESDRIRDLLTAENIILEDGANGTT-WR 467
Query: 471 R 471
R
Sbjct: 468 R 468
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 318/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + +
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD-PMPSEAGDD 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF +AMNDDF+T A+++LF+LA +NK ++A +L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQRDPIEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|407939986|ref|YP_006855627.1| cysteinyl-tRNA ligase [Acidovorax sp. KKS102]
gi|407897780|gb|AFU46989.1| cysteinyl-tRNA ligase [Acidovorax sp. KKS102]
Length = 460
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/468 (50%), Positives = 319/468 (68%), Gaps = 17/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ +
Sbjct: 2 SLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT I A +D LL I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRALERGITIRQLTDEMIAAMHQDIGLLGIEPPSVEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I +L GLAY+ +NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGQLEGKGLAYRASNG----DVNYSVRKFEGYGKLSGK--SLDELRAGERVAVLDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S +GAGRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KEDPLDFVLWKSAKPEEPPEAKWDSAFGAGRPGWHIECSAMSCATLGETFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+LK Y+ E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVLKTYDAETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ + ID P+A RF AM++
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVTPAQVAS-IDWTSPYAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA+ +NK +S ++A L+ LG LG+L+ FL++
Sbjct: 355 DFGTPEAVAVLFDLASEVNKTRSAELAGLLKALGGCLGILQGDPQAFLQSGA-------A 407
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E +I+ +I R+ A+ KNF EAD+IR L+ GI+L+D G T
Sbjct: 408 GVDEAEIQAQIAARAAAKAAKNFAEADRIRNHLLAQGIVLKDSAAGTT 455
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 581
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 582 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPTEFLQ 641
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 642 GGAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 695
Query: 469 WRR 471
WRR
Sbjct: 696 WRR 698
>gi|365087917|ref|ZP_09327675.1| cysteinyl-tRNA synthetase [Acidovorax sp. NO-1]
gi|363417353|gb|EHL24434.1| cysteinyl-tRNA synthetase [Acidovorax sp. NO-1]
Length = 459
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/468 (51%), Positives = 324/468 (69%), Gaps = 18/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ + Y
Sbjct: 2 SLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGYR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT I A +D LL I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRALERGITIRQLTDEMIAAMHQDIGLLGIEPPSAEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I +L GLAY+ +NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGQLEGQGLAYRASNG----DVNYSVRKFDGYGKLSGK--SLDELRAGERVAVLDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K ++P E +W+S +GAGRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KEDPLDFVLWKSAKADEPPEAKWDSTFGAGRPGWHIECSAMSCATLGETFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+L++Y+ E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVLRQYDAETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ + + ID +P+A RF AM++
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPADLAG-IDWADPYAARFKSAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA +NK +S +A L+ LG LG+L+ FL +
Sbjct: 355 DFGTPEAVAVLFDLAGEVNKTRSAALAGLLKALGGCLGILQGDPKAFL--------QAGA 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
S DI+ +I R+ A+ +NF EAD+IRQ L++ GI+L+D P G T
Sbjct: 407 EVSGADIEAQIAARAAAKAARNFAEADRIRQALLDQGIVLKDSPTGTT 454
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/486 (50%), Positives = 317/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTA 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGGAASD-----GLSNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 319/482 (66%), Gaps = 33/482 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K++F P+ GKV++YVCG+T YD CH+GHAR+M+VFD+V R+LR YDV
Sbjct: 2 LKIYNSLTRQKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ESI+ LT R+I +D+ L + PD +P AT + +I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGESIQALTERYIDEMHKDADALGVLRPDIEPKATESMTEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L MIE LI GLAY+ +NG DV Y V F YGKLSGR I + E+ N K
Sbjct: 122 LAMIETLISKGLAYKADNG----DVYYDVSQFNGYGKLSGRNIEDL--RAGERIAVNEAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K +P W S WG GRPGWHIECSAMS + LG FDIHGGGQDL+F
Sbjct: 176 TDPLDFVLWKAAKAGEP---AWESPWGEGRPGWHIECSAMSAHCLGEQFDIHGGGQDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ + VNYWMH+GFV+I+++KMSKS GNF T+R++L++Y E IR+F
Sbjct: 233 PHHENEIAQSEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLEQYPAEAIRYF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI---PKINYKKIIDLNEPHAKRFIIAM 357
IL SHYRS +NY+E L AK +L R Y ++++ K+N++ +E RF AM
Sbjct: 293 ILSSHYRSPLNYAEDQLEQAKAALTRFYTTLREVDTTQKVNWQD----DEEFGGRFKAAM 348
Query: 358 NDDFNTPVAISILFDLANIINKNKSIK-------MAKQLRGLGNWLGLLEYSSDEFLKNN 410
+DDFNT +A+S++ D+ INK + +A L G+ LGL + +D+FL +
Sbjct: 349 DDDFNTALALSVMADVRQAINKAREQAQSEAVAYLAGLLSSFGDVLGLFQQDADKFLTGD 408
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ DI + R++AR KN+ AD+IR +L GI+LED GKT WR
Sbjct: 409 SSSDQLA------VDIDSLVAERNQARADKNWARADEIRDQLTEMGIVLEDAA-GKTSWR 461
Query: 471 RI 472
R+
Sbjct: 462 RL 463
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/471 (50%), Positives = 311/471 (66%), Gaps = 21/471 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IYN+ +R+K+ F P+ GKVS+YVCG+T YDYCHLGHAR+M+ FD++ R+LR YDV
Sbjct: 1 MHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRYRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKI+ A++N ESI LT R I+A ED L + PP ++P AT +I I
Sbjct: 61 TYVRNITDIDDKILKRAEENGESISALTERMIQAMHEDEARLSVLPPSHEPRATGHIGDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MI+ LI AY NGDV Y VR F +YGKL+ R + + E + K+D
Sbjct: 121 VAMIQTLIEKDFAY----AAANGDVYYRVRKFADYGKLNNRQLDDMRSGARVEVDVHKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 177 PLDFVLWKAAK---PGEAHWHSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIRD+L +++PEV+RF ++
Sbjct: 234 HENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFLLV 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYS L+ A+KSL R Y A++ + ++ + +A+RF AM+DDFN
Sbjct: 294 ASHYRSPINYSVDSLHEARKSLTRFYTALEGVEVLSGGGGDETG--YAERFTTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
+P A+++LFDLA +N+ KS +A +L L LGLL+ + FLK N +
Sbjct: 352 SPEALAVLFDLARDLNRAKSESSEKAQHLASELTRLAGVLGLLQQNPQTFLKGN-----Q 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ V SE +I+ KI R EA+ K+F +AD IR EL + GIIL+D G T
Sbjct: 407 QQVALSEAEIEAKIAQRKEAKANKDFAQADAIRDELASMGIILKDSREGTT 457
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G+ FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK + +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDVHLAGCLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIDDLIARRKQARADKNWAESDHIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/491 (49%), Positives = 319/491 (64%), Gaps = 37/491 (7%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 2 MNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 61
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I L +RFI+A ED+ L + PD +P AT I
Sbjct: 62 YPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENI 121
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 122 PQMIAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 177
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+
Sbjct: 178 KRDPLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 234
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 235 FPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 294
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 295 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF---- 350
Query: 344 DLNE---PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLE 400
DL+E + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+
Sbjct: 351 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 410
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
+ EFL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILE
Sbjct: 411 RNPIEFLQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465
Query: 461 DMPNGKTEWRR 471
D G T WRR
Sbjct: 466 DSAGGTT-WRR 475
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/491 (49%), Positives = 319/491 (64%), Gaps = 37/491 (7%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 1 MNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I L +RFI+A ED+ L + PD +P AT I
Sbjct: 61 YPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 121 PQMIAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 233
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 234 FPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 293
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 294 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF---- 349
Query: 344 DLNE---PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLE 400
DL+E + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+
Sbjct: 350 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 409
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
+ EFL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILE
Sbjct: 410 RNPIEFLQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 464
Query: 461 DMPNGKTEWRR 471
D G T WRR
Sbjct: 465 DSAGGTT-WRR 474
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/491 (49%), Positives = 319/491 (64%), Gaps = 37/491 (7%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 2 MNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 61
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I L +RFI+A ED+ L + PD +P AT I
Sbjct: 62 YPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENI 121
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 122 PQMIAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 177
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+
Sbjct: 178 KRDPLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 234
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 235 FPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 294
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 295 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF---- 350
Query: 344 DLNE---PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLE 400
DL+E + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+
Sbjct: 351 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 410
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
+ EFL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILE
Sbjct: 411 RNPIEFLQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465
Query: 461 DMPNGKTEWRR 471
D G T WRR
Sbjct: 466 DSAGGTT-WRR 475
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 315/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGDLTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTSRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDANLAGCLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/501 (48%), Positives = 325/501 (64%), Gaps = 41/501 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYNS +RKK+ F PI GKV +YVCG+T YD CH+GHAR+M+VFD+V R+LR + ++V
Sbjct: 2 LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + ESI LT+R+I+A ED L I PPD +P AT + I
Sbjct: 62 MYVRNITDIDDKIIHRANEKGESIHALTARYIQALHEDEASLQILPPDREPRATESMEAI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L M+ +L+ G AYQ NG D+ Y V +F YG LSG+ + + + N K D
Sbjct: 122 LAMVRQLLEQGYAYQGENG----DIYYDVSHFEGYGALSGKHLEDLRAGERVQVNEAKTD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K ++P W S WG GRPGWHIECSAMS LG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPDEPA---WESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A KFVNYWMH+GFV+++++KMSKS GNF T+R++L+ Y+PEV+R+FIL
Sbjct: 235 HENEIAQSEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLEHYHPEVLRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK--------KIIDLNEPHAKRFI 354
SHYRS +NYS+ L+ AK ++ RLY A++ IP+ + + + +D +P RF
Sbjct: 295 SSHYRSPLNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVDGEDPFILRFR 354
Query: 355 IAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFL 407
AM+DDFNTP A+++L ++ + +N+ K +A LR LG LGLL + ++FL
Sbjct: 355 EAMDDDFNTPEALALLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGLLAHEPEQFL 414
Query: 408 KNN----IYTERKKN-------------VNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
++ + ++ K V S + I+ + R+ ARK K++ EAD+IR
Sbjct: 415 RDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKDWAEADRIRG 474
Query: 451 ELVNNGIILEDMPNGKTEWRR 471
L + GI LED G T WRR
Sbjct: 475 ILKDQGITLEDTAAG-TLWRR 494
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/491 (49%), Positives = 319/491 (64%), Gaps = 37/491 (7%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR
Sbjct: 1 MNMTTIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT I
Sbjct: 61 YPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDANALGVLRPDIEPKATENI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ++ MIE LI N AY NGDV Y+VR F YG+LSG+ + + E + F
Sbjct: 121 PQMIAMIETLIQNSKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS LLG FDIHGGG DL+
Sbjct: 177 KRDPLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQ 233
Query: 240 FPHHENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFC 283
FPHHENEIAQS GA H V YW+H+GF++++ +KMSKS GNF
Sbjct: 234 FPHHENEIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 293
Query: 284 TIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII 343
TIR++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P +
Sbjct: 294 TIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF---- 349
Query: 344 DLNE---PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLE 400
DL+E + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+
Sbjct: 350 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 409
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
EFL+ ++ S +I I R +AR KN++E+D+IR L + IILE
Sbjct: 410 RDPIEFLQGGAVSD-----GLSNEEIDDLIARRKQARADKNWVESDRIRDLLNEHKIILE 464
Query: 461 DMPNGKTEWRR 471
D G T WRR
Sbjct: 465 DNAGGTT-WRR 474
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKVGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 313/472 (66%), Gaps = 14/472 (2%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ SR KQ+F PI PG+V LYVCGIT YDYCH+GHAR+M+ FD + R+LR YDV
Sbjct: 1 MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKI+ A++N E+ TLT+RFI A ED L + PPD +P AT +I I
Sbjct: 61 TYVRNITDIDDKILKRAEENGEAYDTLTARFIDAMHEDERALGVLPPDREPRATQHIQDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ +I+ LI G AY NG DV +SV +F +YGKLS + + + E + K+D
Sbjct: 121 IDLIQVLIDKGAAYTAENG----DVYFSVSDFADYGKLSNKKLEDLLEGVRVELESSKRD 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DFALWK ++ + ++ W + WG GRPGWHIECSAMS LG+HFDIHGGG DL FPH
Sbjct: 177 PRDFALWKGAQQD---QVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH+G V+++N+KMSKS GNF TIR++L+KY PEVIR+F+L
Sbjct: 234 HENEIAQSEAATGETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLEKYQPEVIRYFLL 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYS+ L A+ L RLY A++ + + + + F M+DDFN
Sbjct: 294 SSHYRSPINYSDNSLEQARAGLERLYTALRPYSDVAADEAALSDSSALQAFQQVMDDDFN 353
Query: 363 TPVAISILFDLANIINKNK---SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
T A+S+LFDLA +N+ + + +A QL+ LG LGLLE + +LK+ ++
Sbjct: 354 TREALSVLFDLARQLNQQEGEAARNIAVQLKTLGRVLGLLEGDAQAYLKSGGLVSDAGSL 413
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++DI I R EA++ K+F AD IR +L GI LED P G T+WRR
Sbjct: 414 --SDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLEDGPAG-TQWRR 462
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/478 (50%), Positives = 320/478 (66%), Gaps = 30/478 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K F PI PGKV +YVCG+T YDYCHLGHAR+++VFD+V R+LR YDV
Sbjct: 2 LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N E + LT RFI+A +EDS L + PP +P AT +I +I
Sbjct: 62 TYIRNITDIDDKIIRRANENGEPFQALTERFIQAMREDSEALGVLPPTDEPRATAHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
L M++ LI GLAY +NG DV Y+V F +YGKLSG+ L + + +I E
Sbjct: 122 LAMVQTLIDKGLAYVADNG----DVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGES--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W+S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KRDPLDFALWKAAKPGEPA---WDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N +KMSKS GNF T+R++L+ Y PE +R+
Sbjct: 232 FPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NY + L A+ +L RLY A++ +P+ + E RF AM+D
Sbjct: 292 FILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEAAPAE----GEAFRARFQAAMDD 347
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A+++LF+LA IN+ +++ LR LG LGLL+ + +L+
Sbjct: 348 DFNTPEALAVLFELAREINRLRSDGSDQAAAHGALLRELGAALGLLQDDPERYLRGGADA 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S+ +I+ I R AR +++ EAD++R+ L GI+LED P G T WRR
Sbjct: 408 D-----GPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLEDGPQGTT-WRR 459
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKVLGGIIGLLQRDPTEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I I R +AR KN+ E+D+IR L + IILED +G T
Sbjct: 416 GGAVSD-----GLSNEEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILEDNADGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/475 (53%), Positives = 328/475 (69%), Gaps = 21/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+NS +++K F PI PGKV LYVCG+T YDYCH+GHAR+MIVFD+V R+LR Y+V
Sbjct: 2 LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E I LT RFI+A ED+ L++ PD +P AT IP+I
Sbjct: 62 TYVRNITDIDDKIIQRANENGEDINQLTDRFIQAMYEDTDALNVIRPDIEPRATQSIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MI+ L+ AY +NG DV Y+++ F NYG+LSG+ + + E N K+
Sbjct: 122 VAMIQSLLDKNYAYLTDNG----DVCYAIQRFENYGQLSGKHLDDLRAGERVEVNESKQH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECSAMS + LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKTAK---PGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA FVN WMH+GFV+IN++KMSKS NF T+R++L++Y PEV+R+FIL
Sbjct: 235 HENEIAQSEGATGETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLERYQPEVVRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYSE L AK+S+ RLY+AI+D+P + D + +RF+ AMNDDFN
Sbjct: 295 TSHYRSELNYSEQELEAAKQSITRLYIAIRDLPNTDEPCPDD---SYNQRFLTAMNDDFN 351
Query: 363 TPVAISILFDLA---NIINKNK---SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ LF L+ NI+ + K +I +A +LR LGN LGLL+ + FL+ T ++
Sbjct: 352 TPEALAALFSLSKEINILRRKKVSEAIPLASELRRLGNLLGLLQAKPETFLQG---TSQE 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K S +I+ I R +ARK ++F AD+IR +L GIILED G T WR+
Sbjct: 409 KEPGLSVTEIEQLIVERIDARKNRDFATADQIRADLTAKGIILEDNAQG-TSWRK 462
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/485 (49%), Positives = 317/485 (65%), Gaps = 31/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWL Y +
Sbjct: 12 LNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGYPL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ+
Sbjct: 72 TYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQM 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 132 IAMIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRD 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPH
Sbjct: 188 PLDFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 244
Query: 243 HENEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR
Sbjct: 245 HENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 304
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
++LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P ++ + N
Sbjct: 305 EVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFELSENAN 364
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EF
Sbjct: 365 D-YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAYLAGCLKALGGIIGLLQRDPTEF 423
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 424 LQGGAVSD-----GLSNEEIEDLIAQRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGT 478
Query: 467 TEWRR 471
T WRR
Sbjct: 479 T-WRR 482
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/486 (50%), Positives = 317/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 290 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 349
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 350 MIETLIQNGKAYP----AANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 405
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 406 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 462
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 463 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 522
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 523 LKQYDPEVVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 578
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+
Sbjct: 579 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTA 638
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 639 FLQGGAASD-----GLSNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 693
Query: 466 KTEWRR 471
T WRR
Sbjct: 694 TT-WRR 698
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/486 (50%), Positives = 317/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I L +RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ + E
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRNPIE 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDSAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|149926799|ref|ZP_01915058.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
gi|149824351|gb|EDM83569.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
Length = 441
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/452 (50%), Positives = 313/452 (69%), Gaps = 19/452 (4%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD+CHLGHAR+M+VFD+++RWLR + Y VTYVRNITDIDDKII A +N ES
Sbjct: 1 MYVCGMTVYDFCHLGHARVMVVFDLLKRWLRASGYPVTYVRNITDIDDKIIRRAVENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I++LT RFI A ED+ L I+ PD++P AT Y+ ++ MI+ L+ LAY+++ +G
Sbjct: 61 IRSLTDRFIAAMHEDADALGIERPDHEPRATEYVAEMQDMIQTLMNKRLAYRDD----SG 116
Query: 147 DVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFKKDPLDFALWKVSKNNDPYEIRWN 203
DVN++VR F YG+LSG+ S + + E+ + K DPLDF LWK +K ++P + +W+
Sbjct: 117 DVNFAVRAFPEYGRLSGK--SLDELRAGERVGVSGSKNDPLDFVLWKSAKADEPADAKWD 174
Query: 204 SKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWM 263
S +G GRPGWHIECSAMSC LLG+ FDIHGGG DL+FPHHENEIAQS GA F YWM
Sbjct: 175 SDFGVGRPGWHIECSAMSCKLLGNTFDIHGGGADLQFPHHENEIAQSVGATGEGFAQYWM 234
Query: 264 HSGFVKI----NNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNY 319
H+GFV++ ++KMSKS NF TIRD+LK Y+ EV+RFFILR+ YRS + YSE ++
Sbjct: 235 HNGFVRVETNGQSEKMSKSLNNFFTIRDILKVYDAEVVRFFILRAQYRSQLTYSEAHVQD 294
Query: 320 AKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINK 379
AK +L RLY A+ D + + ID + RF AMNDD NTP+A+S+LF++AN +N+
Sbjct: 295 AKAALGRLYTAVGD---VQVAQSIDWTQEFEARFAEAMNDDMNTPIAVSVLFEMANEVNR 351
Query: 380 NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
+A +L+ L LGLL +++ F K + + E +I+ I R++A+
Sbjct: 352 TADQTLAARLKALAQVLGLLGRTAEAFQKAEVGDQAGA---LDEAEIQALIDARAQAKAD 408
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++F +AD IRQ+L++ G++LED G TEWRR
Sbjct: 409 RDFSKADAIRQQLLDMGVVLEDKRGGATEWRR 440
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/478 (51%), Positives = 317/478 (66%), Gaps = 30/478 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI PGKV +YVCG+T YDYCHLGHAR+++VFD+V R+L+ YDV
Sbjct: 2 LQIHNTLTRQKETFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N E LT RFI+A EDS L I PP +P AT ++ I
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEPFPALTERFIQAMHEDSETLGILPPTDEPRATAHMDDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
L MI+ LI G AY +NG DV Y+V F +YGKLSG+ L S +I E
Sbjct: 122 LDMIQTLIDKGFAYVADNG----DVYYAVSRFPDYGKLSGKNPQDLRSGARVEIGEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K ++P W+S WGAGRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KRDPLDFALWKAAKPDEPA---WDSPWGAGRPGWHIECSAMSTCALGNHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVN WMH+GFV++N +KMSKS GNF T+R++L++Y PE IR+
Sbjct: 232 FPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL S YRS +NY + +L A+ +L R Y A++ +P + E +RF AM+D
Sbjct: 292 FILTSQYRSPLNYDDEHLQNARSALTRFYTALRGLPSVEPVG----GETFRERFHAAMDD 347
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A+++LFDLA IN+ ++ + +LR +G LG+L+ ++ +L+ +
Sbjct: 348 DFNTPEALAVLFDLAREINRVRADDLERAAALGAELRRMGEVLGILQDDAERYLRGDATA 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N DI I R AR KN+ EAD+IR L GI+LED P G T WRR
Sbjct: 408 GGLANA-----DIDDLIAQRIAARAAKNWAEADRIRAVLTEAGIVLEDNPQG-TIWRR 459
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/483 (49%), Positives = 316/483 (65%), Gaps = 31/483 (6%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY +N DV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
LK+Y+PEV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + + N+
Sbjct: 297 LKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFDLSENAND- 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+ +RF AMNDDF T A+++LF+LA +NK +A L+ LG +GLL+ EFL+
Sbjct: 356 YTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQRDPIEFLQ 415
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++ S +I+ I R +AR KN+ E+D+IR L + IILED G T
Sbjct: 416 GGAVSD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTT- 469
Query: 469 WRR 471
WRR
Sbjct: 470 WRR 472
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/475 (50%), Positives = 312/475 (65%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN + +K+ F P+ G+V +YVCG+T YD CHLGHAR+M+VFD+V R+L+ Y+V
Sbjct: 2 LKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N E LT RFI+A ED+ L + PPD +P AT ++ +I
Sbjct: 62 TYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
L MI++LI NG AY NG DV Y VR+F +YGKLSG+ I + E + K+D
Sbjct: 122 LVMIQRLIDNGHAYAVENG----DVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDFALWK +K P E W+S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 178 PLDFALWKSAK---PGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA H FV YWMH+GFV+IN++KMSKS GNF T+R++L++Y E +R+FIL
Sbjct: 235 HENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
S YRS +NY E +L A+ +L R Y A++ + ++ E +RF M+DDFN
Sbjct: 295 TSQYRSPLNYDEEHLENARAALTRFYTALRGLDEVEPAG----GEAFIERFHAVMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LFD+ IN+ + + +LR LG LG+L+ + +LK + E
Sbjct: 351 TPEALAVLFDMVREINRLRETGAAKAAGLGAELRQLGGVLGILQDDPEAYLKGGVGAEG- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ DI I R +AR KN+ EAD+IR EL GI+LED P G T WRR
Sbjct: 410 ---GLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDGPQG-TSWRR 460
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/475 (50%), Positives = 317/475 (66%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K+ F P+ PG+V +YVCG+T YDYCHLGHAR+++VFD+V R+L+ +DV
Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N E I+ LT RFI A ED+ L + PP +P AT +I +
Sbjct: 62 TYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAMHEDAEALGVLPPSAEPRATEHIDGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG-RLISSNFNKINEKNNFKKD 182
L MI L+ G AY +NG DV Y+V F YG+LSG RL + + K+D
Sbjct: 122 LAMIGTLVERGYAYAGDNG----DVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDEAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS + LG+HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKAAKPGEPA---WDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A FVNYWMH+GFV++N +KMSKS GNF T+R++L +Y EV+R+FIL
Sbjct: 235 HENEIAQSEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLARYPAEVVRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS+ L+ A+ L RLY A++ + ++ E + +RF AM+DDFN
Sbjct: 295 SSHYRSPLNYSDEPLDAARAGLTRLYTALRGVQAVDPAG---QGEGYRRRFQAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TPVA+++LFD+A +N+ + + +A LR LG LGLL + FLK
Sbjct: 352 TPVAMAVLFDIARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + E I+ I R ARK K+F EAD+IR EL G++LED P G T WRR
Sbjct: 406 EAGDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLEDGPGGTT-WRR 459
>gi|383759017|ref|YP_005438002.1| cysteinyl-tRNA synthetase [Rubrivivax gelatinosus IL144]
gi|381379686|dbj|BAL96503.1| cysteinyl-tRNA synthetase CysS [Rubrivivax gelatinosus IL144]
Length = 457
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/466 (48%), Positives = 315/466 (67%), Gaps = 15/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TLR++N+ +R+ + F P+ PG V +YVCGIT YD CH+GHAR+ + FD+V RWL+ + YD
Sbjct: 2 TLRLHNTLTRRLETFVPLEPGHVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + SI+ LT + I A D L + P ++P AT+Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRALERGLSIRALTDQMIDAMHRDFAALGLALPTHEPRATDYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L +I +L N LAY+ ++G DVN++VR F YGKLSG+ + + E K
Sbjct: 122 MLDIIGRLERNHLAYRADDG----DVNFAVRRFPGYGKLSGKSLDELRAGERVEVAGGKD 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P + +W+S +GAGRPGWHIECSAMSC LLG FD+HGGG DL+FP
Sbjct: 178 DPLDFVLWKSAKPEEPADAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGMDLQFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA+ H VNYW+H+GF+ ++N+KMSKS GNF TI D+LKK++ E +RFF+
Sbjct: 238 HHENEIAQSEGAFGHPVVNYWLHNGFLNVDNEKMSKSLGNFFTIADVLKKFDGETVRFFM 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
LR+HYRS N+++ L+ A+ +L RLY A+ + ID EP A F AM+DDF
Sbjct: 298 LRTHYRSPFNFADSLLDEARAALRRLYTALDGSDAVAGD--IDWAEPRAAAFKAAMDDDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NTP A+++LF+LAN +N+++ A+ L LG LG+L+ + FL+
Sbjct: 356 NTPGALAVLFELANELNRSRDAATARLLVSLGAVLGILQQAPRAFLQG--------GAGV 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ +I+ +I R+ A++ + F +AD+IR EL G++L+D P G T
Sbjct: 408 DDAEIQRQIEARAAAKRERRFADADRIRDELAAQGVVLKDTPQGTT 453
>gi|351729459|ref|ZP_08947150.1| cysteinyl-tRNA synthetase [Acidovorax radicis N35]
Length = 460
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/468 (50%), Positives = 318/468 (67%), Gaps = 17/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ + Y
Sbjct: 2 SLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKSSGYR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT I A +D LL I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRALERGITIRALTDEMIAAMHQDIGLLGIEPPSVEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I +L GLAY+ +NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGQLEGKGLAYRASNG----DVNYSVRKFDGYGKLSGK--SLDELRAGERVAVLDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P E +W+S++G+GRPGWHIECSAM LG FDIHGGG DL+
Sbjct: 176 KEDPLDFVLWKSSKPEEPPEAKWDSEFGSGRPGWHIECSAMCGATLGETFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+L Y+ E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVLNTYDAETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ + + ID +PHA RF AMN+
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPADVAS-IDWADPHAARFKAAMNE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA +NK +S +A L+ LG+ LG+L+ FL+
Sbjct: 355 DFGTPEAVAVLFDLAGEVNKTRSAGLAGLLKALGDCLGILQGDPKTFLQAGAG------- 407
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E DI+ +I R+ A+ KNF EAD+IR L+ GI+L+D G T
Sbjct: 408 GVDEADIQAQIAARAAAKAAKNFAEADRIRNALLAQGIVLKDSAAGTT 455
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/486 (49%), Positives = 317/486 (65%), Gaps = 37/486 (7%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+M+VFD++ RWLR Y +TY
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKIIA A +N E+I LT+RFI+A ED+ L + PD +P AT IPQ++
Sbjct: 64 VRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADALGVLRPDIEPKATENIPQMIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPL 184
MIE LI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+DPL
Sbjct: 124 MIETLIQNGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKRDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W S WG GRPGWHIECSAMS L G FDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKAAKAGEP---AWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHHE 236
Query: 245 NEIAQSEGAYKH----------------KFVNYWMHSGFVKINNKKMSKSFGNFCTIRDL 288
NEIAQS GA H V YW+H+GF++++ +KMSKS GNF TIR++
Sbjct: 237 NEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 289 LKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE- 347
LK+Y+ EV+RFFILR+HYRS +NYS+ +L+ AK +L RLY +K+ P + DL+E
Sbjct: 297 LKQYDLEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF----DLSEN 352
Query: 348 --PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
+ +RF AMNDDF T A+++LF+LA +NK ++A L+ LG +GLL+
Sbjct: 353 ANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQRDPTA 412
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
FL+ + ++ S +I+ I R +AR KN+ E+D+IR L + IILED G
Sbjct: 413 FLQGSAASD-----GLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGG 467
Query: 466 KTEWRR 471
T WRR
Sbjct: 468 TT-WRR 472
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/477 (50%), Positives = 313/477 (65%), Gaps = 23/477 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+ L+IYN + +K+ F P+ G+V +YVCG+T YD CHLGHAR+M+VFD+V R+L+ Y
Sbjct: 21 TMLKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGY 80
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
+VTY+RNITDIDDKII A +N E LT RFI+A ED+ L + PPD +P AT ++
Sbjct: 81 EVTYIRNITDIDDKIINRANENGEPFMALTERFIQAMHEDATALGVLPPDDEPRATGHMK 140
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFK 180
+IL MI++LI NG AY NG DV Y VR+F +YGKLSG+ I + E + K
Sbjct: 141 EILVMIQRLIDNGHAYAVENG----DVYYDVRSFPDYGKLSGKSIDDLESGARVEVDEIK 196
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDFALWK +K P E W+S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 197 RDPLDFALWKSAK---PGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFDIHGGGADLTF 253
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA H FV YWMH+GFV+IN++KMSKS GNF T+R++L++Y E +R+F
Sbjct: 254 PHHENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQRYRAEEVRYF 313
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
IL S YRS +NY E +L A+ +L R Y A++ + ++ E +RF M+DD
Sbjct: 314 ILTSQYRSPLNYDEEHLENARAALTRFYTALRGLDEVEPAG----GEAFIERFHAVMDDD 369
Query: 361 FNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A+++LFD+ IN+ + + +LR LG LG+L+ + +LK + E
Sbjct: 370 FNTPEALAVLFDMVREINRLRETGAAKAAGLGAELRQLGGVLGILQDDPEAYLKGGVGAE 429
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ DI I R +AR KN+ EAD+IR EL GI+LED P G T WRR
Sbjct: 430 G----GLSDADIDALIQQRLDARAEKNWAEADRIRDELQAAGILLEDGPQG-TSWRR 481
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/478 (48%), Positives = 312/478 (65%), Gaps = 25/478 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K +F P+ PG+V +YVCG+T YDYCHLGHAR+M+VFD+V R+LR Y+V
Sbjct: 2 LQIYNSLTRQKAVFTPLVPGQVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRHLGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RNITDIDDKII A +N+E I LT RFI A ED+ L + PP +P AT +I +I
Sbjct: 62 TYIRNITDIDDKIIRRAGENDEPIAALTERFIAAMHEDAAALGVLPPSDEPRATAHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
M+ L+ GLAY+ +NG DV Y+V F YGKLSG+ L + + +I E
Sbjct: 122 QAMVATLLERGLAYRADNG----DVYYAVGRFPGYGKLSGKDPQELRAGSRVEIGEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KRDPLDFVLWKAAKPGEPA---WESPWGPGRPGWHIECSAMSTCALGAHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FV WMH+GFV++N++KMSKS GNF T+R++L +Y PE +R+
Sbjct: 232 FPHHENEIAQSEGATGEPFVEVWMHNGFVRVNDEKMSKSLGNFFTVREILARYRPEEVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NY E +L A+ +L R Y A++ +P E ++RF AM+D
Sbjct: 292 FILTSHYRSPLNYDEDHLQQARGALTRFYTALRGLPPAEPAG----GEAFSERFHAAMDD 347
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DF TP A+++LF+L IN+ ++ + +LR LG LG+L+ + +L+
Sbjct: 348 DFATPEALAVLFELVREINRVRADDEARAAALGAELRRLGAVLGILQGDPEAYLRGEGLV 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I I R+ AR+ + + EAD++R +L GI+LED P G T WRR
Sbjct: 408 VDAGPAALDDAAIDALIERRTAARQARQWAEADRLRDQLQEAGILLEDGPQGTT-WRR 464
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/480 (52%), Positives = 331/480 (68%), Gaps = 32/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S++K+IF+PI KV +YVCG+T YDYCH+GHAR++++FD++ R LR + +V
Sbjct: 2 LKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFSNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I TLT+RFI A ED L I PPD +P ATN + QI
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYTLTNRFINAMHEDEHALGILPPDVEPRATNTMEQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
MI+ LI G AYQ +NG DV YSVR+F NYGK S + N NK+ + +
Sbjct: 122 FCMIKSLIEKGFAYQAHNG----DVYYSVRHFKNYGKFSRK----NLNKLEIGARIKVES 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KKDPLDF LWK+SK N+P W+S WG GRPGWHIECSAMS + LG+HFDIHGGG DL
Sbjct: 174 AKKDPLDFVLWKMSKPNEP---SWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEGA FVN WMH GFV INNKKMSKS NF TIR++LK YN E++R
Sbjct: 231 TFPHHENEIAQSEGANNCTFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVLKNYNGEILR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK-KIIDLNEPHAKRFIIAM 357
+FI+ SHY S +N+S+ LN AK SL RLY I+ + N + + I ++ ++ RF A+
Sbjct: 291 YFIMSSHYHSPLNFSDENLNKAKSSLSRLYTTIRGLNTSNVRTEEISIHFDYSVRFNEAL 350
Query: 358 NDDFNTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNI 411
+DDFNTP+A+S+LF+LA I+ N +++ +A+ L+ LG ++G+L+ ++D+FL
Sbjct: 351 DDDFNTPIALSVLFELAKIVNIQRENNTDQAKTLAQLLKKLGGYIGILQMNADKFL---- 406
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++ S+ I +KI R++AR K+F +D IR EL IILED NG T WR+
Sbjct: 407 ----KQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNINGTT-WRK 461
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/473 (50%), Positives = 312/473 (65%), Gaps = 25/473 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M+ L+ YNS +R+K+ F P PGK+ +YVCG+T YDYCH+GHAR+M+VFD + R LR +
Sbjct: 21 MNALQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRASG 80
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y + YVRNITDIDDKIIA A +N E I LT+RFI A ED L Q PD +P AT +
Sbjct: 81 YALKYVRNITDIDDKIIARAHENGEPIDALTARFITAMHEDEAALGCQRPDVEPRATAAV 140
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---N 177
++++++ LI G AY +NG DV Y+VR+F YGKL+ R S + + E+ N
Sbjct: 141 SGMIELVQTLIAKGHAYAADNG----DVYYAVRSFPAYGKLANR--SLDDLRAGERIAVN 194
Query: 178 NFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KKDPLDF LWK +K P E W+S WG GRPGWHIECS M LG HFDIHGGG D
Sbjct: 195 EAKKDPLDFVLWKAAK---PGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMD 251
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
LKFPHHE EIAQSEGA H VNYW+H+GFV+I+N+KMSKS GNF T+RD+LKKY+ E +
Sbjct: 252 LKFPHHECEIAQSEGACGHPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVLKKYDGETL 311
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAM 357
R FIL SHYR +NYS+ L+ AKK+L RLY A+ P +D + A F AM
Sbjct: 312 RAFILSSHYRGPLNYSDAALDEAKKALTRLYSALDKAPA---DGAMDADAVAA--FDEAM 366
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
NDDFNTP A ++LFDLA +N ++ +A L+ L LGLL+ + ++LK +
Sbjct: 367 NDDFNTPKAFAVLFDLARRLNSGET-ALAATLKTLSGRLGLLQQNPADWLKG------EN 419
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + SE DI +I+ R+EA+ K++ AD IR EL GII++D G EWR
Sbjct: 420 SGSLSEADILARIHARAEAKAAKDYARADAIRAELAAQGIIIKDTAGG-VEWR 471
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/477 (50%), Positives = 312/477 (65%), Gaps = 25/477 (5%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S + IYN+ +R+K+ F P+ GKVS+YVCG+T YDYCHLGHAR+M+ FD++ R+LR Y
Sbjct: 3 SHMHIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRERGY 62
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DV YVRNITDIDDKI+ A +N ESI LT R I A ED L + PP ++P AT +I
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIAAMHEDEARLFVLPPTHEPRATGHID 122
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFK 180
I+ MIE LI G AY +NG DV Y VR F NYGKL+ R + + + + K
Sbjct: 123 DIVAMIETLIAKGFAYAADNG----DVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHK 178
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K P E W+S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 179 EDPLDFVLWKAAK---PGEAHWSSPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIRD+L +++PEV+RF
Sbjct: 236 PHHENEIAQSEAATGKTYVNTWMHAGAVRVNKEKMSKSLGNFFTIRDVLAEHDPEVVRFL 295
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK--DIPKINYKKIIDLNEPHAKRFIIAMN 358
++ SHYRS INYS L A+KSL RLY A++ D I + P+ +RF M+
Sbjct: 296 LVASHYRSPINYSVDSLTEARKSLTRLYTALEGVDTDAIASSEA----SPYRERFTQVMD 351
Query: 359 DDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A++++F+LA +N+ K + ++ +L+ LG LGLL+ + FLK
Sbjct: 352 DDFNTPEALAVMFELAREVNRAKQEQPDEAARLGGELKQLGAILGLLQQAPQIFLKGT-- 409
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+++ + SE++I+ KI R EA+ K+F +AD IR EL GIIL+D G T W
Sbjct: 410 --QQQGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELSALGIILKDSREG-TSW 463
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/481 (49%), Positives = 319/481 (66%), Gaps = 33/481 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS SR+K+ F PIT GKV++YVCG+T YD CH+GHAR+M+VFD+V R+LR Y+V
Sbjct: 2 LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+I+ LT RFI +D+ L + PD +P AT +P+I
Sbjct: 62 TYVRNITDIDDKIIKRAAENGETIQALTERFIAEMHQDADALGVLRPDLEPKATESMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L M+E LI GLAY+ +NG DV Y V F YGKLSGR + + E+ N K
Sbjct: 122 LAMVETLIGKGLAYKADNG----DVYYDVSKFEAYGKLSGRQVDDL--RAGERIAVNEAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K +P W S WG GRPGWHIECSAMS + LG HFDIHGGGQDL+F
Sbjct: 176 TDPLDFVLWKAAKEGEP---AWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ + VNYWMH+GFV+I+++KMSKS GNF T+R++L +Y E +R+F
Sbjct: 233 PHHENEIAQSEGAHDCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLAQYPAEAVRYF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI---PKINYKKIIDLNEPHAKRFIIAM 357
IL SHYRS +NY+E L AK +L R Y +++D+ P++N++ ++ RF AM
Sbjct: 293 ILSSHYRSPLNYAEDQLEQAKAALTRFYTSLRDVEPQPELNWQD----DKEFGSRFAEAM 348
Query: 358 NDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
+DDFNT +A+S++ D+ +NK + + +A L G+ LGL + ++ FL +
Sbjct: 349 DDDFNTALALSVMADVRQALNKALENNEADLAAYLAGLLLSFGDVLGLFQQDAETFLVGD 408
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + + I I R++AR KN+ AD IR +L GI++ED GKT WR
Sbjct: 409 MAEDSDADA------IDALIVERNQARADKNWSRADDIRDQLSEMGIVIEDAA-GKTSWR 461
Query: 471 R 471
R
Sbjct: 462 R 462
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/475 (50%), Positives = 313/475 (65%), Gaps = 21/475 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S + IYN+ +R+K+ F P+ GKVS+YVCG+T YDYCHLGHAR+M+ FD++ R+LR Y
Sbjct: 3 SHMHIYNTLTRRKEPFTPLEAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRERGY 62
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DV YVRNITDIDDKI+ A +N ESI LT R I A ED L + PP ++P AT +I
Sbjct: 63 DVNYVRNITDIDDKILKRADENGESITALTERMIDAMHEDEARLFVLPPSHEPRATGHID 122
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFK 180
I+ MIE LI G AY +NG DV Y VR F +YGKL+ R + + + K
Sbjct: 123 DIVAMIETLIEKGFAYAADNG----DVYYRVRKFADYGKLNNRQLDDMRAGSRVDVDVHK 178
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 179 EDPLDFVLWKAAK---PGEAHWASPWGNGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIRD+L +++PEV+RF
Sbjct: 236 PHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRFL 295
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ SHYRS INYS L A+KSL RLY A++ + ++ D + + +RF M+DD
Sbjct: 296 LVASHYRSPINYSVDSLTEARKSLTRLYTALEGL-ELGAANSDDAS-AYRERFTQVMDDD 353
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A++++F+LA +N+ N++ K+A +L+ LG+ LGLL+ FLK
Sbjct: 354 FNTPEALAVMFELAREVNRAKQEQPNEAAKLAGELKQLGSVLGLLQQEPQTFLKGT---- 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+++ + SE++I+ KI R EA+ K+F +AD IR EL GIIL+D G T W
Sbjct: 410 QQQGMPLSESEIEAKIAQRIEAKANKDFAQADAIRDELAALGIILKDSREG-TSW 463
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/480 (49%), Positives = 322/480 (67%), Gaps = 26/480 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYNS +RKK F P+TPG V +YVCG+T YDYCHLGHAR+++VFD+V R+L+ ++V
Sbjct: 2 LHIYNSLTRKKDPFIPLTPGHVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLQAQGFNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N+E I+ LT RFI A ED+ L+I PP ++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIQRAAQNHEPIEQLTERFIAAMHEDAQALNILPPTHEPRATQHIQPI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MIE+L+ G AYQ +N D+ Y+V +F +YGKLSGR + E + K+D
Sbjct: 122 LHMIEQLLAKGHAYQASNQ----DIYYAVNSFKDYGKLSGRQLEDLRAGARVEPDEAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGGQDL+FPH
Sbjct: 178 PLDFVLWKRAKPGEP---SWDSPWGLGRPGWHIECSAMSGSYLGQHFDIHGGGQDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE ++ +VNYWMH+GFV++N +KMSKS GNF T+R++L +Y E +R+FIL
Sbjct: 235 HENEIAQSEASHDCTYVNYWMHNGFVRVNEEKMSKSLGNFFTVREILARYQAEEVRYFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI----PKINYKKIIDLNEPHAKRFIIAMN 358
SHY+S +NY + L A+ +L RLY A++ + P ++ D + + +RF AM+
Sbjct: 295 GSHYKSPLNYGDEQLEQARNALTRLYTALRGLDRQPPTTQSEQ--DQTQAYRQRFHAAMD 352
Query: 359 DDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+++LF+LA+ IN+ +S +A L LG LGLL +L++
Sbjct: 353 DDFNTPEALAVLFELAHEINRVRSQDPAYAQYLAATLYQLGGILGLLTQDPQSYLQSGSG 412
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
++ ++ S+ I+ I R +AR K++ EAD+IR L GIILED N T WRR+
Sbjct: 413 SD---TIDASQ--IETLIAQRLQARADKDWPEADRIRDHLKTQGIILEDSGN-TTTWRRL 466
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/473 (52%), Positives = 317/473 (67%), Gaps = 18/473 (3%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ L+IYN+ +R KQ F P PGKV +YVCG+T YDYCH+GHAR+M+VFD V R+LR
Sbjct: 13 IPMLKIYNTLTRSKQEFIPRQPGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYLRHAG 72
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRN+TDIDDKII A +N E LT RFI+A ED L + PPD +P AT I
Sbjct: 73 YQLTYVRNVTDIDDKIIQRANENGEDFAALTERFIEAMHEDERALAVLPPDIEPKATQSI 132
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
I+ MI LI AY NGDV Y+V F YGKLSG+ I N + + +N
Sbjct: 133 ADIINMIAALIGREYAYVG----ANGDVFYAVNRFQGYGKLSGKNIEDLNAGERVDVDNA 188
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK++K +PY W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 189 KRDPLDFVLWKMAKPGEPY---WESPWGHGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQ 245
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FVNYWMH+GFV++N +KMSKS GNF T+RD+LK+Y PEVIRF
Sbjct: 246 FPHHENEIAQSEGATGEPFVNYWMHNGFVRVNEEKMSKSLGNFFTVRDVLKQYRPEVIRF 305
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NYS+ L+ A +L RLY A++ + ++ ++++ + +RF AM+D
Sbjct: 306 FILSSHYRSPLNYSDEQLDDAGVALTRLYTALRGVDIVD----VEIDADYKQRFEQAMDD 361
Query: 360 DFNTPVAISILFDLANIINK-NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DFNTPVA+++LFDLA +NK + +A L+ L LGLL+ D FLK +E
Sbjct: 362 DFNTPVALAVLFDLARELNKADDKTVLAATLKQLAGLLGLLQDDPDGFLKGGAGSE---- 417
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +E I+ I R A+ K++ +AD IR +L GI+LED+ G T WRR
Sbjct: 418 -SLAEAAIEQLIAARKAAKANKDWAQADAIRDQLKGQGIVLEDVAGGNTIWRR 469
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/485 (49%), Positives = 319/485 (65%), Gaps = 32/485 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ +YN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+++VFD++ RWLR + Y +
Sbjct: 17 ITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 76
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I LT+RFI A EDS L + PD +P AT +I Q+
Sbjct: 77 TYVRNITDIDDKIIARANENGETIGELTARFIAAMNEDSDALGVLRPDIEPKATEHIGQM 136
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ MIE L+ NG AY NGDV Y+VR F YG+LSG+ + +++ N K+
Sbjct: 137 IAMIEDLVANGKAYP----APNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDAN-KR 191
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E W S WG GRPGWHIECSAM L G FDIHGGG DL+FP
Sbjct: 192 DPLDFVLWKAAK---PGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 248
Query: 242 HHENEIAQSEGAYK---------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HHENEIAQS GA+ + V YW+H+GF++++N+KMSKS GNF TIR
Sbjct: 249 HHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIR 308
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
D+LKKY PEV+RFFILR+HYRS +NYS+ +L+ AK SL RLY + ++ + D N
Sbjct: 309 DVLKKYAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQAAEFAVREDAN 368
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ + +RF AM+DDFNT A+S+LF+LAN NK S ++A L+ LG LGLL+ F
Sbjct: 369 D-YTRRFFAAMDDDFNTAEAMSVLFELANEANKTGSAELAGCLKALGGTLGLLQDDPQHF 427
Query: 407 LKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
L++ + S ++I+ I R AR+ KN+ E+D+IR L + I+L+D +G
Sbjct: 428 LQSG-----GEEGGLSADEIEALITQRKTARETKNWAESDRIRDLLAEHKILLKDGADGT 482
Query: 467 TEWRR 471
T W R
Sbjct: 483 T-WTR 486
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/478 (51%), Positives = 320/478 (66%), Gaps = 29/478 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYNS +R+K+ F+PI P +V +YVCG+T YDYCHLGHAR+M+VFD V R+L+ + Y V
Sbjct: 2 LHIYNSLTRQKETFHPIHPRQVFMYVCGMTVYDYCHLGHARVMVVFDTVYRYLKASGYLV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I+ LT+RFI A ED L++ PD +P AT+ IP++
Sbjct: 62 QYVRNITDIDDKIIKRAAENGEPIEALTARFIDAMHEDEAALNVLRPDDEPRATSNIPEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L MI+ L+ GLAYQ +NG DV Y V F YGKLSGR + + E+ + K
Sbjct: 122 LAMIQTLLDKGLAYQGSNG----DVYYDVSKFDGYGKLSGRKLEDM--RAGERVAVDEIK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DP+DF LWK SK P E W++ WGAGRPGWHIECSAMS LLG HFDIHGGG DL+F
Sbjct: 176 DDPMDFVLWKASK---PGEPAWDAPWGAGRPGWHIECSAMSQKLLGDHFDIHGGGSDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEG HK VNYWMH+GF+++N++KMSKS GNF TIR++L+ Y E +RFF
Sbjct: 233 PHHENEIAQSEGCTGHKHVNYWMHNGFIRVNDEKMSKSLGNFFTIREVLQHYRAEAVRFF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
IL SHYRS +NY+ L+ A SL RLY A++ +P+ + + +RF AM+DD
Sbjct: 293 ILNSHYRSQLNYATDQLDAANASLSRLYTALRGLPEAGAANYTE----YERRFDAAMDDD 348
Query: 361 FNTPVAISILFDLANIINKNKSIK-------MAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
FNTP AI+++F+LA IN+ ++ + + L+ LG LG+L+ + +E+LK +
Sbjct: 349 FNTPEAIAVMFELARDINRIRTEQSEGAAAPLGALLKLLGKALGILQDNPEEWLKGSAGA 408
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S+ DI I R AR KN+ E+D+IR EL G+ILED G T WRR
Sbjct: 409 D-----GLSDADIDALIQQRLAARAAKNWGESDRIRDELKTKGVILEDSA-GATSWRR 460
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 318/482 (65%), Gaps = 29/482 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+++VFD++ RWLR + Y +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + +I+ LT FI A EDS L + PD +P AT +IPQ+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++MIE LI NG AY NGDV Y+VR F YG+LSG+ + +++ N K+
Sbjct: 122 IQMIEDLIANGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTN-KR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P+ WNS WG GRPGWHIECSAM L G FDIHGGG DL+FP
Sbjct: 177 DPLDFVLWKAAKPEEPH---WNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 233
Query: 242 HHENEIAQSEGAYK------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
HHENEIAQS GA+ V YW+H+GF++++N+KMSKS GNF TIRD+L
Sbjct: 234 HHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVL 293
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
KKY PEV+RFFILR+HYRS +NYS+ +L+ AK SL RLY + ++ ++ + NE +
Sbjct: 294 KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTENTNE-Y 352
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
++F AMNDDF T A+S+LF+LAN NK+ S + A L+ LG LGLL+ FL++
Sbjct: 353 TRKFFAAMNDDFGTAEAMSVLFELANEANKHNSAEFAGCLKALGGMLGLLQEEPQAFLQS 412
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ S ++I I R AR+ KN+ E+D+IR L + II++D +G T W
Sbjct: 413 GASDD-----GLSADEINELIAQRKTARETKNWAESDRIRDVLAAHKIIVKDSADGTT-W 466
Query: 470 RR 471
R
Sbjct: 467 TR 468
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/473 (50%), Positives = 320/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PGK+ +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFISLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ G AY + NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKGNAYVSENG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K +P W+S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAKPGEP---SWHSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G +++N +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E ++F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLD--EYWQEQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+SILF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSILFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLQARAERNWAKADQIRADLLSKGIELEDGATGTT-WRRI 454
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 320/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PGK+ +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ G AY + NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKGSAYVSENG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAKPGEP---SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G +++N +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E ++F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLD--EYWQEQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLQARAERNWAKADQIRTDLLSKGIELEDGATGTT-WRRI 454
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 317/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ LYVCG+T YDYCH+GHAR ++ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V YVRNITDIDDKII A +N ESI +LTSRFI A ED L PD P AT+YI
Sbjct: 61 WQVKYVRNITDIDDKIIKRANENGESISSLTSRFIDAMNEDFAKLGCLAPDAAPKATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI+ L+ NG AY NNG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIDTLVNNGTAYPANNG----DVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGAD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A ++VNYWMH+GF+ ++ +KMSKS GNF TIRD+++K++PEV+
Sbjct: 234 LSFPHHENEIAQSEAATGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVV 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +NYS++ L AK +L+R Y + K + +++++ L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNYSDVALKEAKNTLMRFYHSFKAYQAVYGEQMVETLDQSFVERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNTP AI++LF+L +N+ + +Q LR L N LGL++++ DEFLK+
Sbjct: 354 MCDDFNTPEAIAVLFELNKELNRAVKDQNQEQAAVYYSTLRHLTNILGLVQHNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE I+ I R +A+K KNF AD+IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LGLSEAQIEDLIQQRKDAKKEKNFARADEIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 318/482 (65%), Gaps = 29/482 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P+ P V +YVCG+T YDYCHLGHAR+++VFD++ RWLR + Y +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + +I+ LT FI A EDS L + PD +P AT +IPQ+
Sbjct: 62 TYVRNITDIDDKIIKRANERGITIQELTEEFITAMNEDSDKLGVLRPDVEPKATEHIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++MIE LI NG AY NGDV Y+VR F YG+LSG+ + +++ N K+
Sbjct: 122 IQMIEDLIANGKAYP----AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTN-KR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P+ WNS WG GRPGWHIECSAM L G FDIHGGG DL+FP
Sbjct: 177 DPLDFVLWKAAKPEEPH---WNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 233
Query: 242 HHENEIAQSEGAYK------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL 289
HHENEIAQS GA+ V YW+H+GF++++N+KMSKS GNF TIRD+L
Sbjct: 234 HHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVL 293
Query: 290 KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
KKY PEV+RFFILR+HYRS +NYS+ +L+ AK SL RLY + ++ ++ + NE +
Sbjct: 294 KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELTENTNE-Y 352
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
++F AMNDDF T A+S+LF+LAN NK+ S + A L+ LG LGLL+ FL++
Sbjct: 353 TRKFFAAMNDDFGTAEAMSVLFELANEANKHNSAEFAGCLKALGGVLGLLQEEPQAFLQS 412
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ S ++I I R AR+ KN+ E+D+IR L + II++D +G T W
Sbjct: 413 GASDD-----GLSADEINELIAQRKTARETKNWAESDRIRDVLAAHKIIVKDGADGTT-W 466
Query: 470 RR 471
R
Sbjct: 467 TR 468
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 320/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PGK+ +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ G AY ++NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKGNAYVSDNG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAKPGEP---SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G +++N +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E ++F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLD--EYWQEQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLQARAERNWAKADQIRADLLSKGIELEDGATGTT-WRRI 454
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/477 (49%), Positives = 316/477 (66%), Gaps = 30/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS + K+ F PI PG+V +YVCG+T YD+CHLGHAR ++VFD V R+LR Y+V
Sbjct: 2 LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E + LT RFI+A ED L ++PPD++P AT + +
Sbjct: 62 TYVRNITDIDDKIIRRAAENGEPMTALTDRFIRAMHEDCSALGVEPPDHEPRATERLESM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ +IE+LI G AY +NG DV +SV +F YGKLSGR + + ++I E + K
Sbjct: 122 IALIEELIAGGHAYVGDNG----DVYFSVASFPEYGKLSGRRVEELRSGSRI-EPDEAKH 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP+DF LWK +K+ +P W S WG GRPGWHIECSAMS LLGSHFDIHGGG DL+FP
Sbjct: 177 DPVDFVLWKAAKSGEPA---WPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A H+FVNYWMH+G V+I+++KM+KS GNF T+RD+L ++ EV+R F+
Sbjct: 234 HHENEIAQSECASGHRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEHPAEVVRLFL 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L SHYRS +NY+ L+ A+ L RLY A++ +P + +RF AM+DDF
Sbjct: 294 LSSHYRSPLNYTGDALDEARGGLERLYNALRGLPAAAPAR-----SQARERFREAMDDDF 348
Query: 362 NTPVAISILFDLANIINKNKS-------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
NT A+++LFD A IN+ + A +LR LG LGLL+ + +L+ ++
Sbjct: 349 NTREALAVLFDGAREINRLREAGDASGAASAAAELRELGAVLGLLQQDPEAYLRGDV--- 405
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ + R+ ARK K+F EAD+IR EL GI LED P G T+WRR
Sbjct: 406 ----ADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELEDTPEG-TKWRR 457
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 323/482 (67%), Gaps = 34/482 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ S++K++F P+ GKV++YVCG+T YD CH+GHAR+M+VFD+V R+LR + YDV
Sbjct: 2 LKIHNTLSKEKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+I+ LT R+I D+ L + PDY+P AT + +I
Sbjct: 62 TYVRNITDIDDKIIKRATENGETIEALTERYIAEMHRDADALGVLKPDYEPKATESMGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L+M++ LI GLAY +NG DV Y V F +YGKLSGR + N + E+ N K
Sbjct: 122 LEMVQTLIDKGLAYTADNG----DVYYDVSEFPSYGKLSGRDV--NELRAGERVAVNEAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K +P W S WG GRPGWHIECSAMS LG HFDIHGGGQDL+F
Sbjct: 176 TDPLDFVLWKAAKAGEP---AWESPWGLGRPGWHIECSAMSANCLGEHFDIHGGGQDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA+ + VNYWMH+GFV+I+++KMSKS GNF T+R++L+ Y E +R+F
Sbjct: 233 PHHENEIAQSEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLELYPAEAVRYF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI---PKINYKKIIDLNEPHAKRFIIAM 357
IL SHYRS +NY+E L AK +L R Y +++++ ++ +++ ++ RF AM
Sbjct: 293 ILSSHYRSPLNYAEDQLEQAKAALTRFYTSLREVQPQEEVRWQE----DKEFGPRFKEAM 348
Query: 358 NDDFNTPVAISILFDLANIINK----NKSIKMAKQLRGL----GNWLGLLEYSSDEFLKN 409
+DDFNT +A+S++ D+ +NK + I+ A GL G+ LGL + ++D FL
Sbjct: 349 DDDFNTALALSVMADVRQALNKAFERGQGIEQAAYYAGLLLSFGDVLGLFQQNADAFLVG 408
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ ++ + +I + R++AR KN+ AD+IR +L GI+LED GKT W
Sbjct: 409 DTGSDDEA------AEIDALVAERNQARADKNWARADEIRDQLTEMGIVLEDAA-GKTSW 461
Query: 470 RR 471
RR
Sbjct: 462 RR 463
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/481 (48%), Positives = 312/481 (64%), Gaps = 30/481 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
L I+NS +++K+ F PI PG V +YVCG+T YDYCHLGHAR ++VFD+V R+LR Y
Sbjct: 23 GMLHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY 82
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
VT+VRNITDIDDKII A + E + +T RFI+A ED+ L + PPD++P AT +I
Sbjct: 83 RVTFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHID 142
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG-RLISSNFNKINEKNNFK 180
I+ MIE+L+ G AY ++G DV ++V ++ YGKLSG R E + K
Sbjct: 143 DIIAMIERLVERGHAYVADDG----DVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGK 198
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DP+DFALWK ++ +P W S WG GRPGWHIECSAMS +LG HFDIHGGG DLKF
Sbjct: 199 RDPVDFALWKAARPGEPA---WPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKF 255
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A H FVNYWMH+G V+IN++KM+KS GNF T+R++L ++ E +R F
Sbjct: 256 PHHENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLF 315
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA--KRFIIAMN 358
+L SHYRS +NYS L A+ +L RLYLA++ +P+ + +P RF AM+
Sbjct: 316 LLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEA----DPQGFRARFHAAMD 371
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKNNI 411
DDFNTP A+++LF+LA +N+ + LR LG LGLL+ + FL+
Sbjct: 372 DDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFLRGG- 430
Query: 412 YTERKKNVNYSEN-DIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ E+ +I + R+EARK ++F EAD+IR EL GIILED P G T WR
Sbjct: 431 ------DAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILEDGPQGTT-WR 483
Query: 471 R 471
R
Sbjct: 484 R 484
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/473 (50%), Positives = 320/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PGK+ +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ G AY + NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKGNAYVSENG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K P E W S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAK---PGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G +++N +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E ++F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLD--EYWQEQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLKARAERNWTKADQIRADLLSKGIELEDGATGTT-WRRI 454
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/478 (48%), Positives = 310/478 (64%), Gaps = 28/478 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+NS +++K+ F PI PG V +YVCG+T YDYCHLGHAR ++VFD+V R+LR Y V
Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGYRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A + E + +T RFI+A ED+ L + PPD++P AT +I I
Sbjct: 62 TFVRNITDIDDKIIRRAAELGEPMGAVTERFIRAMHEDAEALGVLPPDHEPRATGHIDDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG-RLISSNFNKINEKNNFKKD 182
+ MIE+L+ G AY ++G DV ++V ++ YGKLSG R E + K+D
Sbjct: 122 IAMIERLVERGHAYVADDG----DVYFAVSSYPEYGKLSGERQEDLRAGARVEVDEGKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK ++ +P W S WG GRPGWHIECSAMS +LG HFDIHGGG DLKFPH
Sbjct: 178 PVDFALWKAARPGEPA---WPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A H FVNYWMH+G V+IN++KM+KS GNF T+R++L ++ E +R F+L
Sbjct: 235 HENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHRAEAVRLFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA--KRFIIAMNDD 360
SHYRS +NYS L A+ +L RLYLA++ +P+ + +P RF AM+DD
Sbjct: 295 SSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEA----DPQGFRARFHAAMDDD 350
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKNNIYT 413
FNTP A+++LF+LA +N+ + LR LG LGLL+ + FL+
Sbjct: 351 FNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFLRGG--- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I + R+EARK ++F EAD+IR EL GIILED P G T WRR
Sbjct: 408 ---DAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILEDGPQGTT-WRR 461
>gi|393759333|ref|ZP_10348149.1| cysteinyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393162561|gb|EJC62619.1| cysteinyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 483
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/489 (47%), Positives = 316/489 (64%), Gaps = 29/489 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYNS SR K++F P+ PG V +YVCG+T YD+CHLGHAR+++ FDIVQRWLR + Y V
Sbjct: 2 LRIYNSLSRSKEVFSPVEPGHVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + + + +T +I A D L +Q PD +P AT ++P +
Sbjct: 62 TYVRNITDIDDKIIRRAVERKQLMSEVTDFYIDAMHADEKALGVQSPDSEPRATQHVPDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ+ +GDVNY+VR F YGKLSGR S + + E+ N+ K
Sbjct: 122 LGIIAKLEENGLAYQSE----DGDVNYAVRQFPGYGKLSGR--SLDDLRAGERVALNSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K+++P E +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKDDEPAESKWESSYGLGRPGWHIECSAMSKALLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ + N WMH G + ++++KMSKS GNF IRD +
Sbjct: 236 PHHENEIAQTEGAFGGQLANVWMHCGPLMVDSEKMSKSLGNFRRIRDTVAPEGLADDQSS 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+++L RLY ++ +P + + ID
Sbjct: 296 YVANPREAEMLRFFIVRNHYRSLQNYAPDNLRDAQQALDRLYQTLQHVPAADVQ--IDWT 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ A F AMNDDFNT AI++LF+LA N++K + A +R LG +GLL+ +
Sbjct: 354 QGPALAFAEAMNDDFNTAGAIAVLFELAGQANRDKDAQAAGLMRALGGVIGLLQVDPAVY 413
Query: 407 LKNNIYTERKKNV----NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDM 462
+ + +V + S+ I + RS+A++ ++F AD IR++L G+ LED
Sbjct: 414 WRAGTRFGQAASVAGADSLSDTQIDELLAERSQAKQNRDFARADAIREQLKEQGVELEDR 473
Query: 463 PNGKTEWRR 471
P G T+WRR
Sbjct: 474 PGGATQWRR 482
>gi|319762811|ref|YP_004126748.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|330824891|ref|YP_004388194.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
gi|317117372|gb|ADU99860.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|329310263|gb|AEB84678.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
Length = 458
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/466 (52%), Positives = 312/466 (66%), Gaps = 15/466 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ G V +YVCG+T YD CHLGHAR MI FD+VQRWLR +
Sbjct: 2 SLRIYNTLSRALEDFSPLEAGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGLA 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E+I++LT R I A ED+ L I+ P ++P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVENGETIRSLTDRMIDALHEDADALGIERPTHEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L MI L GLAYQ NGDVNY+VR F YG+LSG+ + N + + K
Sbjct: 122 MLSMIGTLQSRGLAYQ----AANGDVNYAVRKFPGYGRLSGKSLDELNAGERVAVQDGKL 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P E++W S +G GRPGWHIECSAM C LLG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPEEPAEVKWQSAYGEGRPGWHIECSAMGCTLLGESFDIHGGGADLAFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEGA F WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E +RFF+
Sbjct: 238 HHENEIAQSEGATGKPFARVWMHNGFINVDNEKMSKSLGNFFTIRDVLKEYDAETVRFFV 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+RSHYRS +NYS+++L+ A+ +L RLY A+ + ID EPHA RF AM++DF
Sbjct: 298 VRSHYRSPLNYSDVHLDDARAALKRLYTALSLVAPAPVA--IDWAEPHAARFKAAMDEDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
TP A+++LFDLA +N++KS A L+ LG LGLL+ FL K
Sbjct: 356 GTPEAVAVLFDLAGEVNRSKSPGAAGLLKALGGHLGLLQGDPQAFL--------KAGAGL 407
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ +I R+ A+ KNF EAD+IR +L+ GI+L+D G T
Sbjct: 408 DEPAIQARIAARAAAKAAKNFAEADRIRADLLAQGIVLKDSAAGTT 453
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/489 (50%), Positives = 323/489 (66%), Gaps = 37/489 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F PI P V +YVCG+T YDYCHLGHAR+++VFD++ RWLR + Y +
Sbjct: 2 LYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A +N E+I+ LT RFI+A EDS L + PD +P AT +I Q+
Sbjct: 62 TYVRNITDIDDKIIARANQNGETIQQLTERFIQAMNEDSQALGVLRPDIEPKATEHIAQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
++MIEKLI NG AY NGDV Y+VR F YG+LSG+ + + E + FK+D
Sbjct: 122 IQMIEKLIENGKAYPAE----NGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM L G FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPH 234
Query: 243 HENEIAQSEGAYK----------------HKFVNYWMHSGFVKINNKKMSKSFGNFCTIR 286
HENEIAQS GA V YW+H+GF++++N+KMSKS GNF TIR
Sbjct: 235 HENEIAQSCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIR 294
Query: 287 DLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL- 345
D+LKKY PEV+RFFILR+HYRS +NYS+ +L+ AK SL RLY + ++ I +K +D
Sbjct: 295 DVLKKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFK--LDSN 352
Query: 346 --NEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSS 403
N + +F AMNDDF T A+S+LF++AN NKN S +++ L+ LG LGLL+ +
Sbjct: 353 GNNNDYTHKFFNAMNDDFGTAEAVSVLFEIANEANKNDSAELSGCLKTLGGVLGLLQDNP 412
Query: 404 DEFLKNNIYTERKKNVN-YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDM 462
++FL+ NV+ S ++I I R AR+ KN+ E+D+IR L + I ++D
Sbjct: 413 EQFLQGG------NNVDGLSADEINKLISQRKIARETKNWAESDRIRDILAEHKIQVKDS 466
Query: 463 PNGKTEWRR 471
+G T W R
Sbjct: 467 ADGTT-WTR 474
>gi|124267642|ref|YP_001021646.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
gi|124260417|gb|ABM95411.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
Length = 474
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/472 (48%), Positives = 312/472 (66%), Gaps = 23/472 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRI+N+ +R + F PI PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWLR++
Sbjct: 15 SLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVSGLR 74
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + I+ LT A +D L I+PP ++P AT Y+
Sbjct: 75 VTYVRNITDIDDKIIKRALERGIPIRQLTDEMTAAMHQDIGALGIEPPTHEPRATEYVGA 134
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
++ +IE L NGLAY+ GDVNYSVR F YG+LSG+ I + + E+
Sbjct: 135 MVGLIEVLERNGLAYRVP----GGDVNYSVRKFPGYGRLSGKSIDA--LRAGERVAVLEG 188
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K +P + ++++ +G GRPGWHIECSAMS LLG FDIHGGG DL+
Sbjct: 189 KDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGMDLQ 248
Query: 240 FPHHENEIAQSEGAY----KHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
FPHHENEIAQS+GA+ H FVN WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E
Sbjct: 249 FPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDILKRYDGE 308
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII 355
IRFF+LR HYRS N+S+ L+ A+ L RLY A++ + ID +PHA RF
Sbjct: 309 TIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAE--IDWTDPHAARFKA 366
Query: 356 AMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
AM+DDFNTP+A+S+LFDLA +N+++S + A LR L LGLL+ + ++L+
Sbjct: 367 AMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQYLQG------ 420
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I+ +I R+ A+ ++F E+D+IR L GI+L+D P G T
Sbjct: 421 --GSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKDTPAGTT 470
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 318/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PGK+ +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ AY + NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKDSAYVSENG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAKPGEP---SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G ++IN +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E ++F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLD--EYWQEQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLKARAERNWAKADQIRADLLSKGIELEDGATGTT-WRRI 454
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/483 (50%), Positives = 327/483 (67%), Gaps = 38/483 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S++K++F PI KV +YVCG+T YDYCH+GHAR++++FD++ R LR +V
Sbjct: 2 LKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYFPNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I LT+RFI A ED L + PPD +P ATN + QI
Sbjct: 62 EYVRNITDIDDKIIKRAIENKEDIYALTNRFIDAMHEDERALGVLPPDVEPRATNAMKQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
MI+ LI G AYQ +NG DV YSVR+F NYGKLS + N +K+ E +
Sbjct: 122 FYMIKSLIEKGFAYQAHNG----DVYYSVRHFKNYGKLSRK----NIDKLEAGARIEIES 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+PLDF LWK+SK N+P W+S WG GRPGWHIECSAMS + LG+HFDIHGGG DL
Sbjct: 174 AKKNPLDFVLWKMSKPNEP---SWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEGA FVN WMH GFV I+++KMSKS NF TIR +L+ YN E +R
Sbjct: 231 SFPHHENEIAQSEGANNCTFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILESYNCETLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP----HAKRFI 354
+FI+ SHYRS +N+S+ LN AK SL RLY AI+ +N + P ++ RF
Sbjct: 291 YFIMSSHYRSPLNFSDDNLNKAKSSLSRLYTAIR---GLNTSSTVTEKVPMYFDYSVRFN 347
Query: 355 IAMNDDFNTPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
A+++DFNTP+A+SILF+LA +N +++ +A+ L+ LG+++G+L+ +D+FL
Sbjct: 348 EALDNDFNTPIALSILFELAKTVNLQRKKDVDQANALAQLLKKLGDYIGILQMDADKFL- 406
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
K+ ++ S +++ +KI R+EAR KNF +D+IR +L GI+LED N T
Sbjct: 407 -------KQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNANDTT- 458
Query: 469 WRR 471
WRR
Sbjct: 459 WRR 461
>gi|187631649|sp|A2SIM2.2|SYC_METPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/472 (48%), Positives = 312/472 (66%), Gaps = 23/472 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRI+N+ +R + F PI PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWLR++
Sbjct: 2 SLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVSGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + I+ LT A +D L I+PP ++P AT Y+
Sbjct: 62 VTYVRNITDIDDKIIKRALERGIPIRQLTDEMTAAMHQDIGALGIEPPTHEPRATEYVGA 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
++ +IE L NGLAY+ GDVNYSVR F YG+LSG+ I + + E+
Sbjct: 122 MVGLIEVLERNGLAYRVP----GGDVNYSVRKFPGYGRLSGKSIDA--LRAGERVAVLEG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K +P + ++++ +G GRPGWHIECSAMS LLG FDIHGGG DL+
Sbjct: 176 KDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGMDLQ 235
Query: 240 FPHHENEIAQSEGAY----KHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
FPHHENEIAQS+GA+ H FVN WMH+GF+ ++N+KMSKS GNF TIRD+LK+Y+ E
Sbjct: 236 FPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDILKRYDGE 295
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII 355
IRFF+LR HYRS N+S+ L+ A+ L RLY A++ + ID +PHA RF
Sbjct: 296 TIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAE--IDWTDPHAARFKA 353
Query: 356 AMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
AM+DDFNTP+A+S+LFDLA +N+++S + A LR L LGLL+ + ++L+
Sbjct: 354 AMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQYLQG------ 407
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I+ +I R+ A+ ++F E+D+IR L GI+L+D P G T
Sbjct: 408 --GSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKDTPAGTT 457
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/473 (50%), Positives = 317/473 (67%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +RKK+ F + PG + +YVCGIT YD+CHLGHAR M+ FD++ R+LR +DV
Sbjct: 2 LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKIIA A + SI LT+++I A D+ L+I PPD++P AT +I I
Sbjct: 62 TYVRNITDIDDKIIARASERGVSIDELTAQYIDAMNNDTHALNILPPDHEPRATGHIETI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+++I++L+ G AY + NG DV Y V F YGKLS + L+S + +I ++
Sbjct: 122 IRLIQRLLEKGNAYVSENG----DVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVKE--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ + LG FDIHGGG DL+
Sbjct: 175 KRSPLDFVLWKKAKPGEP---SWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A F NYW+H G +++N +KM+KS GNF TI D+LK+++PEVIR+
Sbjct: 232 FPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHHPEVIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE L AKK+LIRLY A+KD+P +D E +F AMND
Sbjct: 292 FLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTEDSKLD--EYWQVQFNQAMND 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+ + FL++ + E K
Sbjct: 350 DFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEEKLV- 408
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R +AR +N+ +AD+IR +L++ GI LED G T WRRI
Sbjct: 409 ------IEQLIAERLQARAERNWAKADQIRADLLSKGIELEDGATGTT-WRRI 454
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/486 (49%), Positives = 310/486 (63%), Gaps = 33/486 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GKVS+YVCG+T YDYCHLGHAR+M+ FD++ R+LR YDV
Sbjct: 1 MQIYNTLTRRKEPFTPLVAGKVSMYVCGMTVYDYCHLGHARVMVAFDVITRYLRHRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKI+ A +N E+I LT R I A +D L++ PP +P AT +I I
Sbjct: 61 TYVRNITDIDDKILKRADENGETISALTERMIDAMHDDEARLNVLPPSREPRATGHIGDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MIE LI G AY NG DV Y VR F NYGKL+ R + + + + K+D
Sbjct: 121 IAMIETLIDKGFAYPAKNG----DVYYRVRKFANYGKLNNRQLDDMRSGARVDVDVHKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 177 PLDFVLWKAAK---PTEAHWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIRD+L +++PEV+R+ ++
Sbjct: 234 HENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDVLAEHDPEVVRYLLV 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-------------PKINYKKIIDLNE-- 347
SHYRS INYS L A+KSL R Y A++ + P I E
Sbjct: 294 ASHYRSAINYSVDSLVEARKSLTRFYTALEGVEVQESVGEELQQAPTSEVAFIASKEEVA 353
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEY 401
+++RF AM+DDFNTP A+++LFDLA +N+ K + +A +L+ L + LGLL+
Sbjct: 354 AYSERFTTAMDDDFNTPEALAVLFDLAREVNRAKGESPQKALLLALELKRLASVLGLLQQ 413
Query: 402 SSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
S D FLK ++ V SE +I+ KI R EA+ K+F +AD IR EL GIIL+D
Sbjct: 414 SPDTFLKGA----QQHGVALSETEIEAKIAQRKEAKASKDFAQADAIRDELAALGIILKD 469
Query: 462 MPNGKT 467
G T
Sbjct: 470 SREGTT 475
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 319/482 (66%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKII A +N E+I+ LT RFI+A ED+ L PD P AT YI
Sbjct: 61 WEVKYVRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI KL+ NG AY NGDV + V F YG+LSGR + +++ +
Sbjct: 121 DQMQNMIGKLVDNGSAYP----ATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P+ WNS WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VDKKHPFDFVLWKHAKENEPF---WNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y A K + +++ D ++ H +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+LA +N+ + A+Q LR L N LGL++++ D+FL++
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDDFLRS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE++I+ I R +A+K K+F +AD IRQ L+N G++LED G T W
Sbjct: 414 DIGQEA---LGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTRQG-TLW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 319/482 (66%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKII A +N E+I+ LT RFI+A ED+ L PD P AT YI
Sbjct: 61 WEVKYVRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLAPDEAPRATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI KL+ NG AY NGDV + V F YG+LSGR + +++ +
Sbjct: 121 DQMQNMIGKLVDNGSAYP----ATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P+ WNS WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VDKKHPFDFVLWKHAKENEPF---WNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y A K + +++ D ++ H +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+LA +N+ + A+Q LR L N LGL++++ D+FL++
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDDFLRS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE++I+ I R +A+K K+F +AD IRQ L+N G++LED G T W
Sbjct: 414 DIGQEA---LGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTRQG-TLW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/482 (49%), Positives = 314/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P PG + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+DV Y+RNITDIDDKII A +NNE+I+ LTSRFI A ED+ L PD P AT YI
Sbjct: 61 WDVRYIRNITDIDDKIIKRANENNETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
++ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 GEMQNMISTLVDKGSAYPASNG----DVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKGAKPNEP---SWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LTFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI-NYKKIIDLNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y A K ++ +E +RF IA
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYEQVYGQNDSTQKDEQFIERFNIA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNTP AI++LF+L +N+ + A+Q LR L LGL+++ DEFLK+
Sbjct: 354 MRDDFNTPEAIAVLFELNRELNRAVKEQQAEQAAIYYVTLRHLTQILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E ++ S+++I+ I R++A+K K+F AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEV---LSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTRQG-TLW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/473 (50%), Positives = 297/473 (62%), Gaps = 29/473 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+ YNS SR+K+ F+P+ G+ +YVCG+T YDYCH+GHAR+M+VFD + R LR
Sbjct: 1 MSALQFYNSLSRQKEPFHPLHAGRTGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRALG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y++ YVRNITDIDDKII A +N E I LT RF A ED L PPD +P AT+ +
Sbjct: 61 YELHYVRNITDIDDKIIVRAAENGEPIAALTERFTAAMHEDEAALGCLPPDEEPRATDAV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEK 176
P ++ +IE LI G AY +NG DV Y+VR+F YGKL+ R L + +NE
Sbjct: 121 PGMIALIETLIKKGHAYAADNG----DVYYAVRSFPGYGKLANRSLDDLRAGERIAVNEA 176
Query: 177 NNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQ 236
N DPLDF LWK +K P E W+S WG GRPGWHIECS MS LG HFDIHGGG
Sbjct: 177 KN---DPLDFVLWKAAK---PGEPSWDSPWGQGRPGWHIECSVMSAAALGEHFDIHGGGM 230
Query: 237 DLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEV 296
DLKFPHHE EIAQSEGA H+ VNYW+H+GFV+IN++KMSKS GNF T+RD+LK Y+ E
Sbjct: 231 DLKFPHHECEIAQSEGACGHQHVNYWLHNGFVQINDEKMSKSLGNFFTVRDVLKHYDGET 290
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIA 356
+R FIL SHYR +NYS+ L AKK L RLY A+ P L+ F A
Sbjct: 291 LRTFILGSHYRGPLNYSDTALAEAKKMLTRLYTALDKQPLDGA-----LDTAAVAAFEEA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
MNDD NTP A ++LFDLA IN + +A L+ LG LG+L+ + FLK
Sbjct: 346 MNDDINTPKAFAVLFDLARRINSGDA-HLAATLKTLGGRLGILQQAPAVFLKG------- 397
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ E I +I R+ A+ K++ AD IR EL GIIL+D G TEW
Sbjct: 398 -EGSLDEATITARIAERNAAKAAKDYARADAIRNELAAQGIILKDTAGG-TEW 448
>gi|424776948|ref|ZP_18203923.1| cysteinyl-tRNA ligase [Alcaligenes sp. HPC1271]
gi|422887988|gb|EKU30382.1| cysteinyl-tRNA ligase [Alcaligenes sp. HPC1271]
Length = 483
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/489 (47%), Positives = 315/489 (64%), Gaps = 29/489 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYNS SR K++F P+ PG V +YVCG+T YD+CHLGHAR+++ FDIVQRWLR + Y V
Sbjct: 2 LRIYNSLSRSKEVFSPVEPGHVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+YVRNITDIDDKII A + + + +T +I A D L +Q PD +P AT ++P +
Sbjct: 62 SYVRNITDIDDKIIRRAVERKQLMSQVTDFYIAAMHADEKALGVQSPDSEPRATQHVPDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ+ +GDVNY+VR F YGKLSGR S + + E+ N+ K
Sbjct: 122 LGIIAKLEENGLAYQSE----DGDVNYAVRQFPGYGKLSGR--SLDDLRAGERVALNSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K ++P E +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKEDEPAESKWESSYGLGRPGWHIECSAMSKALLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ + N WMH G + ++++KMSKS GNF IRD +
Sbjct: 236 PHHENEIAQTEGAFGGQLANVWMHCGPLMVDSEKMSKSLGNFRRIRDTVAPEGLADEESS 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+++L RLY ++ +P + + ID
Sbjct: 296 YIANPREAEMLRFFIVRNHYRSLQNYAPDNLRDAQQALDRLYQTLQHVPAADVQ--IDWT 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ A F AMNDDFNT A+++LF+LA N++K + A +R LG +GLL+ +
Sbjct: 354 QGPALAFAEAMNDDFNTAGAVAVLFELAGQANRDKDAQAAGLMRALGGVIGLLQVDPAVY 413
Query: 407 LKNNIYTERKKNV----NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDM 462
+ + + +V + S+ I + R +A++ ++F AD IR++L G+ LED
Sbjct: 414 WRASTRFGQAASVAGADSLSDAQIDELLAERGQAKQNRDFARADAIREQLKEQGVELEDR 473
Query: 463 PNGKTEWRR 471
P G T+WRR
Sbjct: 474 PGGATQWRR 482
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/482 (49%), Positives = 319/482 (66%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKII A +N E+I+ LT RFI+A ED+ L PD P AT YI
Sbjct: 61 WEVKYVRNITDIDDKIIKRANENGETIQALTDRFIQAMNEDAHRLGCLEPDEAPRATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI KL+ NG AY NGDV + V F YG+LSGR + +++ +
Sbjct: 121 DQMQNMIGKLVDNGSAYP----ATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P+ WNS WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VDKKHPFDFVLWKHAKENEPF---WNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y A K + +++ D ++ H +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+LA +N+ + A+Q LR L N LGL++++ D+FL++
Sbjct: 354 MCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDDFLRS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE++I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLDQGVVLEDTRQG-TLW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|375105425|ref|ZP_09751686.1| cysteinyl-tRNA synthetase [Burkholderiales bacterium JOSHI_001]
gi|374666156|gb|EHR70941.1| cysteinyl-tRNA synthetase [Burkholderiales bacterium JOSHI_001]
Length = 458
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/469 (49%), Positives = 313/469 (66%), Gaps = 20/469 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TLRIYN+ +R+ + F PI P +V +YVCG+T YD CH+GHAR+M+ FD+V RWLR Y
Sbjct: 2 TLRIYNTLARRVEPFQPIDPTRVRMYVCGMTIYDLCHMGHARMMMAFDVVVRWLRALGYP 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDI+DKII A + SI+ LT I A ++D + PD++P AT+++PQ
Sbjct: 62 VTYVRNITDIEDKIIKRALERGISIRALTDEMIAAMRQDLGAIGTLAPDHEPRATDFVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +IE L GLAYQ +G DVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 122 MLGLIETLEGKGLAYQGRDG----DVNYAVRKFPGYGKLSGK--SLDELRAGERVAVADG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K+++P + +W SK+G GRPGWHIECSAMSC LLG +FDIHGGG DL+
Sbjct: 176 KDDPLDFVLWKSAKDSEPDDAKWPSKYGPGRPGWHIECSAMSCALLGDYFDIHGGGMDLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA FV YW+H+GF+ ++N+KMSKS GNF TIRD+LK ++ E +RF
Sbjct: 236 FPHHENEIAQSEGAQGKPFVKYWLHNGFLNVDNEKMSKSLGNFFTIRDVLKTFDGESLRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMN 358
F+LR+HYRS N+S+ L A+ SL RLY A+ + P+ ++ +D +P A F AMN
Sbjct: 296 FMLRTHYRSPFNFSDGLLEDARTSLRRLYTALDAVAPEEHF--TLDWAQPQAATFREAMN 353
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTP A+++LFDLA +N+ +S A L+ L LG+L+ + FL+
Sbjct: 354 DDFNTPGALAVLFDLAGELNRTRSPATAALLKALAATLGILQQAPRSFLQG--------G 405
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I I R++A++ ++F AD IR++L GI L+D G T
Sbjct: 406 AGLDTAAIDALIAERNDAKQARDFARADAIRKDLAAQGIELKDSAQGTT 454
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/482 (49%), Positives = 308/482 (63%), Gaps = 29/482 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F PI PGKV +YVCG+T YDYCHLGHAR+M+ FD+V R+LR ++DV
Sbjct: 1 MQIYNTLTRRKEPFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVAFDVVTRYLRWRDFDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKI+ A +N E+I +LT R I A ED L + PD +P AT ++ +I
Sbjct: 61 TYVRNITDIDDKILKRADENGETIASLTERMIAAMHEDEARLGVLRPDREPRATGHVSEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E LI G Y NGDV Y VR F YGKL+ R L + + K+D
Sbjct: 121 IAMVETLIDKGYGYP----AANGDVYYRVRKFEGYGKLNNRNLDEMRAGARVDVDEHKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 177 PLDFVLWKAAK---PGEASWPSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGPDLTFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VN WMH+G V++N +KMSKS GNF TIR++L+ ++PEV+R+ ++
Sbjct: 234 HENEIAQSEAATGKPYVNTWMHAGAVRVNQEKMSKSLGNFFTIREVLEVHDPEVVRYLLV 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINY-KKIIDLNEPHAK--------RF 353
SHYRS INY+ L A+KSL R Y A+ + +K I AK RF
Sbjct: 294 ASHYRSPINYAPESLADARKSLERFYNALDGVGVGGKDEKTIQKERALAKAVYGDFEDRF 353
Query: 354 IIAMNDDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFL 407
I+AM+DDFNT A+S+LFDLA +N+ K + +A +L+ LG LGLL+ + FL
Sbjct: 354 IVAMDDDFNTAEALSVLFDLARELNRAKKEATKLAPGLAHELKRLGGVLGLLQQQPEAFL 413
Query: 408 KNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
K + SE++I+ KI R+EA+K ++F AD IR EL GI+L+D G T
Sbjct: 414 KGG-----AGELPLSESEIEAKIVARAEAKKARDFAAADGIRDELATLGIVLKDSREG-T 467
Query: 468 EW 469
W
Sbjct: 468 SW 469
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/473 (48%), Positives = 307/473 (64%), Gaps = 20/473 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F PI PG+V +YVCG+T YDYCHLGHAR+M+ FD++ R+LR YDV
Sbjct: 1 MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKI+ A++N E+I +LT R I A ED L + PD +P AT ++ +I
Sbjct: 61 TYVRNITDIDDKILKRAEENGETIASLTDRMIDAMHEDEGRLGVLRPDAEPRATQHVDEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MI+ LI G AY +NG DV Y VR F +YGKL+ R + K+D
Sbjct: 121 VTMIQTLIDKGYAYAASNG----DVYYRVRKFADYGKLNNRDPDDMRAGARVDVEELKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 177 PLDFVLWKAAK---PGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++VN WMH+G V++ ++KMSKS GNF TIR++L+ ++PEV+R+ ++
Sbjct: 234 HENEIAQSEAATGKQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHDPEVVRYLLV 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INY+ L A+KSL R Y A+ + + +++ +RFI AM+DDFN
Sbjct: 294 ASHYRSPINYAPDSLADARKSLERFYNALDGVALEGVETPGEVDPSFDRRFIEAMDDDFN 353
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
T AIS+LFDLA +N+ ++ +A +L+ LG LGLL+ FLK
Sbjct: 354 TAGAISVLFDLARELNRARKEAPEQAPALAAELKRLGGVLGLLQQEPAVFLKGG-----A 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ SE +I+ +I R+EA++ ++F AD IR EL GI+L+D G T W
Sbjct: 409 GELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSREG-TSW 460
>gi|421521487|ref|ZP_15968142.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
gi|402754813|gb|EJX15292.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
Length = 460
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR EL G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDELTAMGVVLED-SKGTTTWR 457
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/479 (48%), Positives = 308/479 (64%), Gaps = 30/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K F P+ PGKV +YVCG+T YDYCHLGHAR+M+VFD+V R+LR Y+V
Sbjct: 2 LQIHNSLTRQKTPFQPLEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT RFI A ED+ L + P +P AT +I +I
Sbjct: 62 TYVRNITDIDDKIIRRAAENGESCAALTERFIAAMHEDAAALGVLAPTSEPRATAHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
M+ LI GLAY +NG DV Y+V F YGKLSG+ L + +++E
Sbjct: 122 QTMVATLIDKGLAYAADNG----DVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W+S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KRDPLDFALWKGAKPGEP---SWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA F WMH+GFV+IN +KMSKS GNF T+R++L+++ E IR+
Sbjct: 232 FPHHENEIAQSEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NY++ L A+ +L RLY A++ +P+ A RF AM+D
Sbjct: 292 FILTSHYRSPLNYADEQLQSARGALTRLYTALRGLPEAEAPA----ESAFATRFTAAMDD 347
Query: 360 DFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DFNTP A+++LF+LA +N+ ++ + +LR LG +G+L+ + +L+
Sbjct: 348 DFNTPEALAVLFELAREVNRARDAGEPEQAAALGAELRRLGGVIGILQDDPERYLRGGD- 406
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R AR +++ EAD++R L GI+LED G T WRR
Sbjct: 407 ---GGTDGLDDAAIESMIAQRQAARAARDWAEADRLRDALTEAGIVLEDGAQGTT-WRR 461
>gi|120610992|ref|YP_970670.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|187629785|sp|A1TPK8.1|SYC_ACIAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120589456|gb|ABM32896.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 459
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/468 (49%), Positives = 315/468 (67%), Gaps = 18/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWLR +
Sbjct: 2 SLRIYNTLSRAMEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT A ED L I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVERGITIRQLTDEMTAAMHEDIGALAIEPPTVEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I L GLAY+ +G DVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIGTLERKGLAYRAGSG----DVNYAVRRFEGYGKLSGK--SLDELRAGERVAVQDD 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S +G GRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +WMH+GFV+++N+KMSKS GNF TIR++L++ + E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVLQQVDAETLRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L A+ SL RLY A+ + + ID +PHA RF AM++
Sbjct: 296 FIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGA-IDWADPHAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LF+LA +N+ +S ++A L+ LG LGLL+ FL ++ V
Sbjct: 355 DFGTPEAVAVLFELAGEVNRTRSARLAGLLKALGGCLGLLQGDPQAFL--------RQGV 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+I +I R+ A+ ++F EAD+IR +L+ GI+L+D P G T
Sbjct: 407 QLDAAEIAARIAARAAAKAARDFAEADRIRNDLLAQGIVLKDSPAGTT 454
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/480 (49%), Positives = 311/480 (64%), Gaps = 32/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ +++K+ F PI PGKV +YVCG+T YDYCHLGHAR+++ FD++ R+LR YDV
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R IKA ED L + PD +P AT YI +I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ MI KLI G AY +NG DV +SV +F +YGKLS + L++ + E
Sbjct: 122 IAMIHKLIAGGHAYAADNG----DVYFSVDSFDDYGKLSKKKLEDLLAGARVDVQEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ P DFALWK +K E+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 175 KRSPADFALWKAAKAG---EVSWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLL 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A H FVN WMH+G +++N +KMSKS GNF TIR++++KY EV+R+
Sbjct: 232 FPHHENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFIIAMN 358
F++ SHYRS ++YSE L A ++L RLY A++ I K D+ E H +RF AM+
Sbjct: 292 FLVSSHYRSQVDYSEENLAEAGRTLTRLYHALRGIVP---AKAADVPESEHDERFAEAMD 348
Query: 359 DDFNTPVAISILFDLANIINKNK-------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNI 411
DDFNT AI++L +AN IN+++ + + A L LG LGLL+ + F + +
Sbjct: 349 DDFNTAGAIAVLHAVANEINQHRRDGREDDAKQSAAILVRLGGVLGLLQQDPEAFFQADT 408
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E S DI+ I R++ARK KNF EAD+IR EL+ GIIL+D G T WR+
Sbjct: 409 GGE------LSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREGTT-WRK 461
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/480 (49%), Positives = 311/480 (64%), Gaps = 32/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ +++K+ F PI PGKV +YVCG+T YDYCHLGHAR+++ FD++ R+LR YDV
Sbjct: 2 IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R IKA ED L + PD +P AT YI +I
Sbjct: 62 NYVRNITDIDDKILRRADENGEPYDELTDRMIKAMHEDEARLGVLSPDEEPRATAYIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ MI KLI G AY +NG DV ++V +F +YGKLS + L++ + E
Sbjct: 122 IAMIHKLIAGGHAYAADNG----DVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ P DFALWK +K E+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 175 KRSPADFALWKAAKAG---EVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLL 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A H FVN WMH+G +++N +KMSKS GNF TIR++++KY EV+R+
Sbjct: 232 FPHHENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMEKYPAEVVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFIIAMN 358
F++ SHYRS ++YSE L A ++L RLY A++ I K D+ E H +RF AM+
Sbjct: 292 FLVSSHYRSQVDYSEENLAEAGRTLTRLYHALRGIVP---AKAADVPESEHDERFAEAMD 348
Query: 359 DDFNTPVAISILFDLANIINKNK-------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNI 411
DDFNT AI++L +AN IN+++ + + A L LG LGLL+ + F + +
Sbjct: 349 DDFNTAGAIAVLHAVANEINQHRRDGREDDAKQSAAILVRLGGVLGLLQQDPEAFFQADT 408
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E S DI+ I R++ARK KNF EAD+IR EL+ GIIL+D G T WR+
Sbjct: 409 GGE------LSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSREGTT-WRK 461
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ LYVCG+T YDYCH+GHAR ++ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V YVRNITDIDDKII A +N ESI LTSRFI A ED L PD P AT+YI
Sbjct: 61 WKVKYVRNITDIDDKIIKRANENGESISELTSRFIDAMNEDFAKLGCLAPDVAPKATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NNG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQAMIGNLVDKGTAYPSNNG----DVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGAD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH+GF+ ++ +KMSKS GNF TIRD+++K++PEV+
Sbjct: 234 LTFPHHENEIAQSEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIEKFHPEVV 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +NYS++ L AK +L R Y + K + +I+ L+E +RF A
Sbjct: 294 RYFIVSSHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYGDHLIETLDEALVERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNTP AI++LF++ +N+ + A+Q LR L N LGL++ + DEFLK+
Sbjct: 354 MRDDFNTPEAIAVLFEINKELNRTVKEENAEQAAIYYATLRHLTNILGLVQQNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S I+ I R +A+K K F AD+IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|386012371|ref|YP_005930648.1| protein CysS [Pseudomonas putida BIRD-1]
gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
Length = 460
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGTTTWR 457
>gi|409422162|ref|ZP_11259271.1| cysteinyl-tRNA ligase [Pseudomonas sp. HYS]
Length = 460
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/474 (48%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YD+CHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLEGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A N ES LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANDNGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANSWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS+INYSE L +K +L R Y A++ +P++ + E + +RF +AMNDDF
Sbjct: 295 SSHYRSSINYSEDSLRESKGALERFYHALRGLPRVAAEG----GEEYVERFTVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRESDPQAAAGLAGRLRELGDLLGVLQLDADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIQARLQARADKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|397697053|ref|YP_006534936.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
gi|397333783|gb|AFO50142.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
Length = 460
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 302/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLSILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGTTTWR 457
>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
gi|187629852|sp|A5W458.1|SYC_PSEP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
Length = 460
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDPEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGTTTWR 457
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/482 (50%), Positives = 311/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKIIA A +N ESI LT RFI+A ED+ L PD P AT+YI
Sbjct: 61 WNVKYVRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY + NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGHLVNKGAAYPS----ANGDVYFEVEKFAKYGRLSGRKLDDMQAGASERVDVD 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S+ L AK +L R Y A K ++ D L+E +RF IA
Sbjct: 294 RYFIVSSHYRSPVNFSDFALKEAKTTLSRFYHAFKAYQQVYADLSTDVLDETFVERFNIA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT AI++LF++ +N+ + A+Q LR L N LGL++Y+ DEFLK+
Sbjct: 354 MRDDFNTSEAIAVLFEIIKELNRAVKEENAEQATLYYSTLRHLTNILGLVQYNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE DI I R +A+K K+F AD+IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LGLSEADITDFIQQRVDAKKNKDFARADEIRQSLLAQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 468
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/484 (47%), Positives = 308/484 (63%), Gaps = 32/484 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IY++ +R+++ F + PG+V +YVCG+T YDYCH+GH R + FD+V+RWL + Y V
Sbjct: 2 LSIYSTLTREQRPFESLEPGRVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGYKV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITD+DDKII A + + LT F +A QED L L P ++P AT YIPQ+
Sbjct: 62 TFVRNITDVDDKIIRRAAERGVTTDELTDEFARAMQEDMLALGCLAPTFEPRATQYIPQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLIS--SNFNKINEKNNFKK 181
L +I KL G AY +GDV+Y+VR F NYG+LSG+ I + ++ E+ K
Sbjct: 122 LNLIGKLEEKGFAYH----AADGDVDYAVRKFPNYGRLSGKSIDDLQSGARVQEREG-KH 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P +W+SKWG GRPGWHIECSAM+ LLG DIHGGG DL FP
Sbjct: 177 DPLDFVLWKSAKPGEP---QWDSKWGCGRPGWHIECSAMAMDLLGETIDIHGGGPDLVFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINN-----KKMSKSFGNFCTIRDLLKKYN--- 293
HHENEIAQSE A H+F WMHSG +++ + +KMSKS GNF TIRD LK+ N
Sbjct: 234 HHENEIAQSEAATGHQFARTWMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKETNAAY 293
Query: 294 -----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
EV+RFF+LRS YRS I +S + + A K+L+RLY A+K + + +D NEP
Sbjct: 294 GEGCGAEVLRFFLLRSQYRSPITFSSVLIEEAHKALVRLYTALKG--RAADRAALDWNEP 351
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
A RF AM+DDFNT +A+S+LF+LA IN+ S + +QL GLG L +L ++FL+
Sbjct: 352 FAARFKAAMDDDFNTALAVSVLFELATEINRTGSPALVRQLLGLGRILNILGMEPEKFLQ 411
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ + I+ I R+ A+K KNF AD+IR+ L+ GI L+D G T
Sbjct: 412 GG------AEASDDASRIEGLIEERALAKKAKNFARADEIRKSLLAEGIELQDGAAGTT- 464
Query: 469 WRRI 472
WRRI
Sbjct: 465 WRRI 468
>gi|384084823|ref|ZP_09995998.1| cysteinyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 466
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/480 (49%), Positives = 311/480 (64%), Gaps = 30/480 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ ++ +Y++ R K I P TPG+V +YVCG+T YDYCHLGHAR+M+ FD V R+LR
Sbjct: 5 LPSITLYDTLQRDKTILEPATPGQVGIYVCGMTVYDYCHLGHARVMVTFDTVVRYLRARG 64
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
VTYVRNITDIDDKII A + ESI+ LT+RFI+A D L Q PD +P AT ++
Sbjct: 65 MKVTYVRNITDIDDKIIRRALEQGESIQALTARFIEAMHADEAALLCQKPDLEPRATEHV 124
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
+ MI +LI G AY NGDV Y+VR+F +YGKLSG+ I N E
Sbjct: 125 GAMQNMIAELIERGHAY----AAANGDVYYAVRSFPDYGKLSGKSIDELNSGARVELGED 180
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K ++P W+S WG GRPGWHIECSAMS LG FDIHGGG DL+
Sbjct: 181 KRDPLDFALWKAAKPDEP---SWSSPWGEGRPGWHIECSAMSADALGCTFDIHGGGADLQ 237
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS+GA F +YWMH+GFV+IN++KMSKS NF T+R+LL ++ EV+RF
Sbjct: 238 FPHHENEIAQSQGA-GCAFAHYWMHNGFVRINDEKMSKSLNNFLTVRELLPLFSGEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII-DLNEPHAKRFIIAMN 358
FIL S YRS ++YSE L A+ L RLY A++ +P ++I+ +L +RF AM+
Sbjct: 297 FILSSQYRSPLHYSEEGLEQARAGLTRLYTALRGMPA---RQIVPELGSEWRERFHNAMS 353
Query: 359 DDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDF+TP A++ LFDLA +N+ + + +A LR L LG+L+ + + + +
Sbjct: 354 DDFHTPAALATLFDLAREVNRLRDEQSEVAAPLATLLRELAAMLGILQEDPESYFRGS-- 411
Query: 413 TERKKNVNYSEND-IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N S+N I+ +I R AR++K+F AD IR EL GIILED P G T WRR
Sbjct: 412 -------NESDNAWIEERIAARLAARQKKDFAGADAIRAELAAAGIILEDGPAG-TSWRR 463
>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
gi|187629853|sp|B0KUU0.1|SYC_PSEPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
Length = 460
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 302/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSMAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDLEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARTDKNWAESDRIRDQLTAMGVVLED-SKGATTWR 457
>gi|395449080|ref|YP_006389333.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
gi|388563077|gb|AFK72218.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
Length = 460
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDPEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGTTTWR 457
>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|37999406|sp|Q88IU4.1|SYC_PSEPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
Length = 460
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLKARADKNWAESDRIRDQLTAMGVVLED-SKGTTTWR 457
>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
Length = 460
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K+ F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEAFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVDAAAGLAGRLRELGDVLGVLQLDADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGATTWR 457
>gi|398845843|ref|ZP_10602856.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM84]
gi|398253175|gb|EJN38319.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM84]
Length = 460
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/474 (49%), Positives = 304/474 (64%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LNIYNTLSKTKEAFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +PY W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEPY---WDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVPAKG----GEEFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDLDAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIQARLQARTDKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|339487907|ref|YP_004702435.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|431802924|ref|YP_007229827.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
gi|338838750|gb|AEJ13555.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|430793689|gb|AGA73884.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
Length = 460
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 302/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PPD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILPPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEEFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRESDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/470 (48%), Positives = 310/470 (65%), Gaps = 17/470 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+L+IYN+ +R+K+ F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD V R +R +
Sbjct: 2 SLQIYNTETRQKETFKPIVPGKVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITDIDDKII A +N ES+++LT RFIKA ED L+I PD +P AT++IP+
Sbjct: 62 VKYVRNITDIDDKIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIPE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
I +++ LI G AY NGDV + V++F +YG+LSG+ E N K+
Sbjct: 122 IQQLVNTLIEKGHAY----AAPNGDVYFKVKSFESYGRLSGKKQEDLEAGARVEINPNKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP+DF LWK SK N+P W+S WG GRPGWHIECSAMS +G DIHGGG DL+FP
Sbjct: 178 DPMDFVLWKASKENEPA---WDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A+ +VN WMH GFV+++N+KMSKS NF TIR++LK Y+PEVIR+F+
Sbjct: 235 HHENEIAQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L SHYRS +NY+ L+ AK +L RLY A+ + ++ N +F AM+DDF
Sbjct: 295 LSSHYRSPLNYTIENLDIAKTNLARLYTAL----QAAEPGLVAENTDFEAKFNEAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NTP A+++LF+L +NK + + L+ L N LGLL + F K+ + +
Sbjct: 351 NTPQAMAVLFELVKEVNKTQQPGLVALLQSLANRLGLLTETPQSFFKSQV----GQTDGL 406
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+++ I+ I R++AR KN+ +D+IR EL+ G+ L D G T WRR
Sbjct: 407 TDDAIEALIVERTQARADKNWARSDEIRDELLAKGVELLDGKEG-TSWRR 455
>gi|388456175|ref|ZP_10138470.1| cysteinyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 454
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 316/474 (66%), Gaps = 27/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L ++NS +RKK+ F I+PGK+ +YVCGIT YD+CH+GHAR M+ FD++ R+LR YDV
Sbjct: 2 LHLFNSLTRKKEPFVSISPGKIGIYVCGITVYDHCHIGHARSMVSFDVIVRYLRSQGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A + I LT+++I A ED+ L+I PPD +P AT +I I
Sbjct: 62 KYVRNITDIDDKIIARAHERAIPIDDLTAQYIAAMNEDTKALNILPPDVEPRATEHIESI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS-----GRLISSNFNKINEKNN 178
+++IE+L+ G AY ++NG DV Y V +F +YGKLS G + + + EK
Sbjct: 122 IRLIERLLEKGNAYLSDNG----DVCYQVDSFADYGKLSHKDLEGLVAGARVEVVKEK-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 176 --RSPLDFVLWKKAKQGEP---SWPSPWGEGRPGWHIECSAMAMGELGEQFDIHGGGLDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSE A + F NYW+H G +++NN+KMSKS GNF TI D+L K++PEV+R
Sbjct: 231 QFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFYTIADVLAKHHPEVVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L SHYRS++NYSE L ++K+L RLY A+KD I +++ F AMN
Sbjct: 291 YFLLSSHYRSSLNYSEENLLNSRKALARLYQALKDSQVIPDG---EMDNHWISEFNQAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTPVA+S+LF L++ INK++S+ +A L+ L +G+L+ FL++ E K
Sbjct: 348 DDFNTPVALSVLFQLSHEINKSRSVILANTLKYLAGIMGILQEDPASFLQSGFAEEDK-- 405
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+I+ I R +AR KN+ AD+IR +L+ GI LED PNG T WR++
Sbjct: 406 -----TEIEELIAERLQARADKNWGRADQIRADLLKRGIELEDGPNGTT-WRKM 453
>gi|121611834|ref|YP_999641.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
gi|187631646|sp|A1WSL6.1|SYC_VEREI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121556474|gb|ABM60623.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
Length = 460
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/468 (49%), Positives = 313/468 (66%), Gaps = 17/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+
Sbjct: 2 SLRIYNTLSRALEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKARGLK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I LT I A D L ++PP +P AT Y+P+
Sbjct: 62 VTYVRNITDIDDKIIGRALERGITIGALTDEMIAAMHADIGALGLEPPTLEPRATQYVPR 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I +L GLAY+ +NG DVNY+VR F YGKLSG+ S + + + +
Sbjct: 122 MLALIGQLQAKGLAYRASNG----DVNYAVRKFQGYGKLSGK--SPDELRAGARVALADG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K ++P E +W+S +G GRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KTDPLDFVLWKSAKPHEPPEAQWDSDYGRGRPGWHIECSAMSCATLGESFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEG +W+H+GFV+++N+KMSKS GNF TIRD+L +Y+ + +RF
Sbjct: 236 FPHHENEIAQSEGVTGKPLARFWLHNGFVRVDNEKMSKSLGNFFTIRDVLAQYDAQTVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+++L RLY A+ +P ID EPHA RF AM++
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVPPAPVAA-IDWTEPHAARFQAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA +NK+ S + A L+ LG LGLL+ FL+ T
Sbjct: 355 DFGTPEAVAVLFDLAVEVNKSHSPQRAGLLKALGGCLGLLQGDPRAFLQAGAGTP----- 409
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E DI+ +I R+ A+ +++F EAD+IR L+ GI+L+D G T
Sbjct: 410 --DEADIQARIAARAAAKAQRDFAEADRIRNALLAQGIVLKDGATGTT 455
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/474 (50%), Positives = 317/474 (66%), Gaps = 39/474 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S++K++F+PI P KV +YVCG+T YDYCH+GHAR++++FD++ R LR + +V
Sbjct: 2 LKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFPNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E I +LT+RFI A ED L + PPD +P AT+ + Q+
Sbjct: 62 EYVRNITDIDDKIIKRAVENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPRATDAMDQM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
MIE LI G+AYQ NG DV YSVR+F YGKLSG+ N +++
Sbjct: 122 FYMIEALIEKGIAYQAKNG----DVYYSVRDFEGYGKLSGK----NLDELEAGARVDIET 173
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KKDPLDF LWK++K P E W+S WG GRPGWHIECSAMS + LG+HFDIHGGG DL
Sbjct: 174 DKKDPLDFVLWKMAK---PSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEGA FVN WMH GFV IN++KMSKS NF TIR +L+ Y+ E +R
Sbjct: 231 TFPHHENEIAQSEGANGCTFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLESYDGETLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAK-----RF 353
+FI+ SHYRS +N+S+ LN AK SL RLY A++ + + ++E + RF
Sbjct: 291 YFIMSSHYRSPLNFSDDNLNLAKTSLTRLYTAMRGLSASDAA----MDEVSQRFDFESRF 346
Query: 354 IIAMNDDFNTPVAISILFDLANIIN--KNKSIKMA----KQLRGLGNWLGLLEYSSDEFL 407
A++DDFNTP+A+SILF+LA +N +++ I A + L+ LG ++G+L+ +D FL
Sbjct: 347 NAALDDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGGYIGILQTDADSFL 406
Query: 408 KNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
K+ V+ ++ DI KI R EA+ K+F +D IR EL G+ L+D
Sbjct: 407 --------KRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPKLGLELKD 452
>gi|388257084|ref|ZP_10134264.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387939288|gb|EIK45839.1| cysteinyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 466
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 308/475 (64%), Gaps = 20/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+IF PI PGK+S+YVCGIT YDYCH+GHAR+++ FD++ ++LR +DV
Sbjct: 2 LQIYNTLTRQKEIFKPIYPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+YVRNITDIDDKII A +N E LT RFI ED L I PD +P AT YI QI
Sbjct: 62 SYVRNITDIDDKIIKRANENGEEFSALTKRFIDYMHEDEARLGIARPDIEPRATAYIDQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ M + LI G AY INGDV Y V F +YGKL+ + + E + K+D
Sbjct: 122 VDMNKTLIDKGFAY----AAINGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDEVKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K +P W S WG GRPGWHIECSAMS G FDIHGGG DL FPH
Sbjct: 178 PRDFVLWKAAKAGEP---AWKSPWGNGRPGWHIECSAMSKNCCGETFDIHGGGPDLPFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A K+VNYWMH+G V+++ +KMSKS GNF TIRD+L+KY+PEV+RF ++
Sbjct: 235 HENEIAQSEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHAKRFIIAMNDDF 361
SHYRS INY+E L A+ L R Y A++D + + + P+ F+ AMNDDF
Sbjct: 295 SSHYRSPINYAEDNLIEARTGLERFYGALRDYADVLPTSLTAMTASPYYTAFVEAMNDDF 354
Query: 362 NTPVAISILFDLANIINKNKS-----IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
NT VA++ +FDL +N KS +A QL+ LG LG+L+ + + FL+
Sbjct: 355 NTRVALAGMFDLVRDLNNAKSNPDLACDLAGQLKALGLILGVLQENPEVFLQAG------ 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + ++++ I R +A+K K + AD+IR+EL+ G++LED +G T+WRR
Sbjct: 409 GSDQIAADNVERLIAERIQAKKDKQYARADEIRKELLAAGVVLEDARDGTTQWRR 463
>gi|444921389|ref|ZP_21241225.1| Cysteine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507427|gb|ELV07603.1| Cysteine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 458
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/472 (51%), Positives = 309/472 (65%), Gaps = 22/472 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+NS +R+++ F PI P K+ +YVCG+T YDYCH+GHAR +I FD+++R+L +DV
Sbjct: 2 LSIFNSLTRQQEDFIPIEPNKIRMYVCGMTVYDYCHIGHARSLIAFDMIRRYLMHKGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A + +I LT FI A ED L++ PD +P AT+ I +
Sbjct: 62 HFVRNITDIDDKIIKRANERGITIHELTDEFINAMHEDCAKLNVLTPDSEPRATDAIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+++IE LI GLAY +GDV Y VR+F +YGKLS + I + E + K+D
Sbjct: 122 IELIEGLISKGLAY----AVPDGDVYYRVRSFKDYGKLSNQNIDELRSGERVEVQSDKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +PY W S WG GRPGWHIECS MS LG+HFDIHGGG DLKFPH
Sbjct: 178 PLDFVLWKRAKAGEPY---WESPWGQGRPGWHIECSVMSKETLGNHFDIHGGGMDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HE EIAQSEG ++ NYWMH+GF+ INN+KMSKS GNF TIRD+LK + EV+RFF+L
Sbjct: 235 HECEIAQSEGYHEEPMANYWMHNGFININNEKMSKSLGNFFTIRDVLKYFPAEVLRFFML 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYR+ +NYS+ LN A L RLY A+ D PK D N P A RF M+DDFN
Sbjct: 295 NSHYRTHVNYSDDLLNQAWNGLRRLYTALNDAPK--ELPAFDPNHPIAVRFSEVMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYS 422
TP AI +LF+ AN+ NK+ K L+ LGN LGLLE + D FLK+ N S
Sbjct: 353 TPQAIDLLFEAANLYNKHHDPKDYVVLKTLGNVLGLLEANPDHFLKS--------APNQS 404
Query: 423 END---IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++D I+ I R+EAR KN+ E+D+IR EL ++LED GKT WRR
Sbjct: 405 DDDTDLIEALIAERNEARANKNWAESDRIRDELKARNVVLEDK-QGKTTWRR 455
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/477 (48%), Positives = 308/477 (64%), Gaps = 28/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S KK+IF PI GKV +YVCG T YD+CH+GHAR MI FD++ R++R Y++
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A++NNE+ + LT R I A +ED L L + PD +P AT ++ QI
Sbjct: 62 NYVRNITDVDDKIIKRAEENNETTQALTERMIAAQREDELRLGNKMPDREPKATEFMQQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ M++ LI G AYQ +G DV Y F YGKL+ R + + K+
Sbjct: 122 IDMVQVLIDKGFAYQGTSG----DVYYRATAFKEYGKLNNRKLEDMLAGARIDVETAKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K E+ W S WG GRPGWHIECSAMS LGSHFDIHGGG DLKFPH
Sbjct: 178 PADFVLWKQAKVG---EVAWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VNYWMH G V++NN+KMSKS GNF T+RD+L+KYNPEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVVRYLMV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIAMNDD 360
S YRS I+YS+ LN AK +L RLY A++ + + + + + RF AM DD
Sbjct: 295 SSQYRSPIDYSDQSLNEAKVALERLYTALRQ------QSVAEEWVASEYTARFEEAMQDD 348
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTPVA+S+LF+L +NK +K+ +A +L+ L + LGLL+ + FL+N+ T
Sbjct: 349 FNTPVAVSVLFELVRELNKAKAEESDKAANLAAELKSLASLLGLLDQVPEYFLQNSTIT- 407
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E+ I+ I R++ARK KNF +D+IR +L + GI L D G T W R
Sbjct: 408 ----AGLDESAIQALIDERTQARKDKNFARSDEIRDQLADQGIELLDSREGTT-WTR 459
>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
Length = 464
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 313/474 (66%), Gaps = 27/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +R K+ F I+PGK+ +YVCGIT YD CH+GHAR M+ FD++ R+LR YDV
Sbjct: 12 LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYDV 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDIDDKIIA A + I LT+++I A ED+ L+I PPD +P AT++I I
Sbjct: 72 KYIRNITDIDDKIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS-----GRLISSNFNKINEKNN 178
+ +IE+L+ G AY ++NG DV Y V +F +YGKLS G + + + EK
Sbjct: 132 IHLIERLLAKGNAYLSDNG----DVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEK-- 185
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 186 --RSPLDFVLWKKAKQGEP---SWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDL 240
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSE A + F NYW+H G +++NN+KMSKS GNF TI D+L K++PEV+R
Sbjct: 241 QFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVR 300
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L SHYRS++NYSE L AKK+L RLY IKD I +L+ F AMN
Sbjct: 301 YFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADG---ELDNHWINEFNQAMN 357
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTPVA+S++F L++ +NK+ S +A L+ LGN +GLL FL++ + E K +
Sbjct: 358 DDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDEDKAS 417
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ N+ R +AR +N+ AD+IR +L++ GI LED NG T WR++
Sbjct: 418 IEQLINE-------RLQARTERNWERADQIRADLLSRGIELEDGANGTT-WRKV 463
>gi|395006327|ref|ZP_10390156.1| cysteinyl-tRNA synthetase [Acidovorax sp. CF316]
gi|394315740|gb|EJE52521.1| cysteinyl-tRNA synthetase [Acidovorax sp. CF316]
Length = 459
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/468 (49%), Positives = 312/468 (66%), Gaps = 18/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR+ + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWL+ +
Sbjct: 2 SLRIYNTLSRELENFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT + A D L I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRALERGITIRALTDEMVAAMHTDIAALGIEPPSIEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I L GLAY+ +NG DVNYSVR F YGKLSG+ S + + E+ +
Sbjct: 122 MLALISTLEGKGLAYRASNG----DVNYSVRKFDGYGKLSGK--SVDELRAGERVAVLDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK SK +P E +W+S++G+GRPGWHIECSAM LG FDIHGGG DL+
Sbjct: 176 KEDPLDFVLWKSSKPEEPPEAKWDSEFGSGRPGWHIECSAMCGATLGETFDIHGGGMDLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIR++L KY+ E +RF
Sbjct: 236 FPHHENEIAQSEGANGKPLAKFWVHNGFVRVDNEKMSKSLGNFFTIREVLAKYDAETVRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+ +L+ A+ +L RLY A+ + ID +P+A RF AM++
Sbjct: 296 FIVRAHYRSALNYSDAHLDDARNALKRLYTALSLVAPAPVAA-IDWADPYAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF P A+++LF+LA +NK +S ++A L+ LG LG+L+ FL +
Sbjct: 355 DFGAPEAMAVLFELAGEVNKTRSAELAGLLKALGGCLGVLQGDPQAFL--------QAGA 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I +I R+ A+ K+F EAD+IRQ L+ GI+L+D G T
Sbjct: 407 GLDEAAIAEQIAARAAAKAAKDFAEADRIRQALLAQGIVLKDSAAGTT 454
>gi|415911782|ref|ZP_11553452.1| cysteinyl-tRNA synthetase, partial [Herbaspirillum frisingense
GSF30]
gi|407762203|gb|EKF71098.1| cysteinyl-tRNA synthetase, partial [Herbaspirillum frisingense
GSF30]
Length = 321
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+IYN+ +R KQ F PI PGKV LYVCG+T YDYCH+GHAR+++VFD+VQRWLR +
Sbjct: 1 MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E+I LT RFI A ED+ L +Q PD++P AT Y+
Sbjct: 61 YDVTYVRNITDIDDKIIKRALENGETISQLTHRFIDAMNEDASALGVQRPDHEPRATQYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
PQ+L +I KL NGLAY+ ++G DVNYSVR+F YGKLSG+ + + + N
Sbjct: 121 PQMLDLIGKLEKNGLAYKASDG----DVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNTG 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S WG GRPGWHIECSAMS LLG HFDIHGGGQDL+
Sbjct: 177 KRDPLDFVLWKAAKPTEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQDLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA++H FVNYWMH+GFV+I+N+KMSKS GNF TIRD+LK+Y+PEV+RF
Sbjct: 237 FPHHENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVLKQYDPEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSL 324
FILR+HYRS +NYS+ +L+ A+++L
Sbjct: 297 FILRAHYRSPLNYSDAHLDDARQAL 321
>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
Length = 454
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 313/474 (66%), Gaps = 27/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YNS +R K+ F I+PGK+ +YVCGIT YD CH+GHAR M+ FD++ R+LR YDV
Sbjct: 2 LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDIDDKIIA A + I LT+++I A ED+ L+I PPD +P AT++I I
Sbjct: 62 KYIRNITDIDDKIIARAHERAIPIDELTAQYIAAMNEDTQALNILPPDVEPRATDHIHSI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS-----GRLISSNFNKINEKNN 178
+ +IE+L+ G AY ++NG DV Y V +F +YGKLS G + + + EK
Sbjct: 122 IHLIERLLAKGNAYLSDNG----DVCYQVNSFADYGKLSNKDLEGLMAGARVEIVKEK-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+ PLDF LWK +K +P W S WG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 176 --RSPLDFVLWKKAKQGEP---SWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSE A + F NYW+H G +++NN+KMSKS GNF TI D+L K++PEV+R
Sbjct: 231 QFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHHPEVVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L SHYRS++NYSE L AKK+L RLY IKD I +L+ F AMN
Sbjct: 291 YFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADG---ELDNHWINEFNQAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
DDFNTPVA+S++F L++ +NK+ S +A L+ LGN +GLL FL++ + E K +
Sbjct: 348 DDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDEDKAS 407
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ N+ R +AR +N+ AD+IR +L++ GI LED NG T WR++
Sbjct: 408 IEQLINE-------RLQARTERNWERADQIRADLLSRGIELEDGANGTT-WRKV 453
>gi|406914965|gb|EKD54097.1| hypothetical protein ACD_60C00124G0002 [uncultured bacterium]
Length = 458
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/474 (49%), Positives = 325/474 (68%), Gaps = 26/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS + KK+IF P+ GK ++YVCG T YDYCHLG+AR FD+V R+LR + Y V
Sbjct: 2 LQIYNSLTHKKEIFEPLQKGKAAIYVCGPTVYDYCHLGNARSFAAFDVVVRYLRYSGYTV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + NES + +RF KA ED L++ PD +P AT +I I
Sbjct: 62 TYVRNITDIDDKIIKRAAEKNESFSEVVTRFTKAFHEDMEKLNLLSPDQEPKATEFIQPI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MIEKLI N LAY +NG DV Y VR F YG LS R + + E ++ K+D
Sbjct: 122 ISMIEKLISNQLAYIASNG----DVYYDVRKFSGYGSLSHRNVDDLESGARVEISDVKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK++K N+P W S +G GRPGWHIECSAMS LLG+HFD HGGG+DL FPH
Sbjct: 178 PLDFVLWKMAKPNEP---AWESPFGLGRPGWHIECSAMSTNLLGAHFDFHGGGKDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSEGA KFVNYW+H+G+++I+ +KMSKS GNF TIR++L +++ EV+R+F++
Sbjct: 235 HENEIAQSEGATDKKFVNYWLHAGYLQIDKEKMSKSLGNFFTIREVLAEFSSEVVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +N+S+ L A ++L RLY A++D+P K N + K FI AM+DDFN
Sbjct: 295 SSHYRSQLNFSKELLQQAHQALARLYTALRDLPHDQEIK----NTEYEKNFISAMDDDFN 350
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP+A S+LF+L++ I ++K +K+A + L+ LG LG+L+ ++F ++ +K
Sbjct: 351 TPIAFSVLFELSHEIQRLRDKDLKLAAEHAALLKRLGGILGILQNDPNDFFQH-----KK 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
++++ + I+ I R++AR KN+ EAD+IR+EL + ++LED + +T W+
Sbjct: 406 ESIDVKK--IEALIAARNKARAEKNWAEADRIRKELASMSVVLEDKAD-RTMWK 456
>gi|170721588|ref|YP_001749276.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
gi|229558806|sp|B1J805.1|SYC_PSEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169759591|gb|ACA72907.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
Length = 460
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/474 (48%), Positives = 303/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGETFDALTARMIDAMHEDERRLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +PY W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEPY---WDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH G ++IN +KMSKS NF TIRD+L Y+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDVYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKG----GEEFVERFSVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + + +A +LR LG+ LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDPDAAAGLAGRLRELGDVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIQARLQARADKNWAESDRIRDQLTAMGVVLED-SKGATTWR 457
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 313/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVLPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ NG AY NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQSMIATLVDNGTAYP----AANGDVYFEVTKFDKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S+ L AK +L R Y + K ++ +K ++ L + KRF A
Sbjct: 294 RYFIVSSHYRSPVNFSDFALKEAKTALSRFYHSFKAYQQMYGQKTVETLEQGFVKRFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT +++LF+L +N+ + A+Q LR L N LGL+++ DEFLK+
Sbjct: 354 MRDDFNTAETMAVLFELNKELNRAVKEETAEQATVLYSTLRYLTNILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E ++ S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQE---ALSLSDTEIENFIQQRVDAKKAKDFAQADAIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/470 (48%), Positives = 309/470 (65%), Gaps = 15/470 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ +R+K++F PI PGKV +YVCG+T YDYCH+GHAR+M+VFD V R +R +
Sbjct: 2 ALHIYNTETRQKEVFKPIVPGKVGMYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITDIDDKII A +N ES+++LT RFI A ED L+I PD +P AT++IP+
Sbjct: 62 VKYVRNITDIDDKIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFIPE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
I +++ LI G AY NGDV + V++F +YG+LSG+ E N K+
Sbjct: 122 IQQLVNTLIEKGHAY----AATNGDVYFKVKSFESYGRLSGKKQDELEAGARVEVNPNKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP+DF LWK SK N+P W+S WG GRPGWHIECSAMS +G DIHGGG DL+FP
Sbjct: 178 DPMDFVLWKASKANEPA---WDSAWGQGRPGWHIECSAMSGSCIGERLDIHGGGMDLQFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A+ +VN WMH GFV+++N+KMSKS NF TIR++LK Y+PEVIR+F+
Sbjct: 235 HHENEIAQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLKDYHPEVIRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L SHYRS +NY+ L+ AK +L RLY A++ ++ + +F AM+DDF
Sbjct: 295 LSSHYRSPLNYTIENLDIAKTNLARLYTALE--AATIQPGLVAVGTEFEAKFNDAMDDDF 352
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NTP A+++LF+L +NK + ++ L+ L N LGLL + + F K+ + +
Sbjct: 353 NTPQAMAVLFELVKEVNKTQQPELVGLLQSLANRLGLLTETPEFFFKSQV----GQPDGL 408
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ I+ I R++AR KN+ +D+IR +L+ G+ L D G T WRR
Sbjct: 409 SDEAIEALIVERTQARADKNWARSDEIRDDLLAKGVELLDSKEG-TSWRR 457
>gi|303256926|ref|ZP_07342940.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
gi|302860417|gb|EFL83494.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
Length = 464
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/481 (49%), Positives = 310/481 (64%), Gaps = 31/481 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L+IYN+ SR + F ITP KV +YVCG+T YD CH+GH R I FD+ +RWL+ + YD
Sbjct: 2 ALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V +VRN+TD+DDKII A + L + K QED L PP +P AT YIP+
Sbjct: 62 VKFVRNVTDVDDKIIKRAAERKILPSELAETYTKRMQEDLGELGCLPPSVEPRATQYIPK 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNN 178
+L +IEKL G AYQ+ NG DV++SVR F YG LSG+ L ++ E
Sbjct: 122 MLALIEKLEEKGYAYQDKNG----DVDFSVRKFKPYGALSGKKVDELQPGERVRVEEA-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDFALWK +K P E W+SKWG GRPGWHIECSAMSC LLG FDIHGGG DL
Sbjct: 176 -KQDPLDFALWKRAK---PGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDL 231
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP---- 294
FPHHENEIAQSE A KFVN WMHSG +++N +KMSKS GNF TIRD LK+ N
Sbjct: 232 MFPHHENEIAQSEAANGKKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGD 291
Query: 295 ----EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA 350
E +RFF+LRSHYRS I++S + A ++LIRLY A+K+ P + +D NE +A
Sbjct: 292 KNGNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADD--NPLDWNEKYA 349
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
+F AM+DDFNT A+++LF+LA +N+ KS ++A+QL+ LG LG+L+ + + F+K
Sbjct: 350 AQFKEAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLAPEAFVKGA 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + E ++ I R A+ KN+ AD+IR+EL+ I+LED P G T WR
Sbjct: 410 VDS-------VDEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLEDAPGGVTTWR 462
Query: 471 R 471
R
Sbjct: 463 R 463
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/475 (48%), Positives = 303/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +++K F PI GK+ +YVCG+T YD CH+GHAR+M+ FD++ R++R +DV
Sbjct: 2 LQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQGWDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N E LT R I A ED L + P +P AT +I I
Sbjct: 62 DYVRNITDVDDKIIKRAAENGEEPHELTERMIAAMHEDEARLSVLRPTQEPRATAHIGDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ ++E LI G AY NGDV Y V F +YGKL+ + + E K+
Sbjct: 122 ISLVETLIEKGFAYP----AANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVEEAKES 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K E+ W+S WG GRPGWHIECSAMS LG+ FDIHGGG DL FPH
Sbjct: 178 PLDFVLWKSAKEG---EVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VN WMH+G V++N++KMSKS GNF TIRD+L+KYN EV+RFF+
Sbjct: 235 HENEIAQSEAANGCTYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLEKYNAEVVRFFLA 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
R HYR+ I+YSE L A+ L R Y A++ + + D E RFI AMNDDFN
Sbjct: 295 RVHYRTYIDYSEDSLKEARVMLERFYQALRGVDAVEGPLENDFEE----RFIAAMNDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S++F+L N +NK +++ +A QLR LG LGLL+ ++DEFL+
Sbjct: 351 TPKAVSVMFELVNELNKATREGASEAPALAAQLRKLGGMLGLLQQNADEFLQGE-----S 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S +I+ I R+EA+K KNF EADKIR +L + GIIL+D G T W R
Sbjct: 406 EEGGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSREG-TSWFR 459
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/487 (48%), Positives = 311/487 (63%), Gaps = 26/487 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L IY+S + +KQ F P+ GKV +YVCG+T YDYCH+GHAR+M+ FD+ RWL
Sbjct: 11 MSQLVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLG 70
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDV YVRNITDIDDKIIA A +N E I LT RFI A ED+ L Q P+ +P AT+YI
Sbjct: 71 YDVNYVRNITDIDDKIIARAAENGEEIGALTQRFITAMHEDATALGCQSPNAEPRATDYI 130
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
++ +MIE L+ N AY +NG DV Y+V +F +YGKLS R L E N
Sbjct: 131 DEMQQMIETLVSNDYAYAGDNG----DVYYAVDSFADYGKLSKRNLDDMQAGSRVEVEND 186
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P DF LWK +K ++P +W S WG GRPGWHIECSAMS LG+ FDIHGGG DL+
Sbjct: 187 KRNPFDFVLWKAAKPDEP---QWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 243
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A ++ WMH GF+ ++ +KMSKS GNF TIRD++ KY PE +RF
Sbjct: 244 FPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRF 303
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID----LNEPHA----K 351
F+L SHYRS +N+S+ L+ A SL RLY A+K + + + +I +N +A +
Sbjct: 304 FLLSSHYRSQVNFSDSALDEAHNSLSRLYQALKVVEQQKGQTLIVDDALINNAYASAPGQ 363
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINKNKSI-------KMAKQLRGLGNWLGLLEYSSD 404
FI AMNDDFN+ AIS+LF LA INK + ++A+QL+ L L +L+
Sbjct: 364 DFIKAMNDDFNSSTAISVLFGLARDINKASKVEDIESAWQLAQQLKALAQTLNILQQPVQ 423
Query: 405 EFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPN 464
+FL+ I + + ++ I I R++A+ KNF AD+IR +L + GI LED
Sbjct: 424 QFLQAVIGEAAEDGL--TDEAIDSLIIERADAKTNKNFARADEIRIQLKDAGIELEDSRA 481
Query: 465 GKTEWRR 471
G T WRR
Sbjct: 482 GTT-WRR 487
>gi|330998823|ref|ZP_08322550.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
gi|329576037|gb|EGG57556.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
Length = 464
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/481 (49%), Positives = 309/481 (64%), Gaps = 31/481 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L+IYN+ SR + F ITP KV +YVCG+T YD CH+GH R I FD+ +RWL+ + YD
Sbjct: 2 ALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V +VRN+TD+DDKII A + L + K QED L PP +P AT YIP+
Sbjct: 62 VKFVRNVTDVDDKIIKRAAERKILPSELAETYTKRMQEDLGELGCLPPSVEPRATQYIPK 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNN 178
+L +IEKL G AYQ+ NG DV++SVR F YG LSG+ L ++ E
Sbjct: 122 MLALIEKLEEKGYAYQDKNG----DVDFSVRKFKPYGALSGKKVDELQPGERVRVEEA-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDFALWK +K P E W+SKWG GRPGWHIECSAMSC LLG FDIHGGG DL
Sbjct: 176 -KQDPLDFALWKRAK---PGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDL 231
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP---- 294
FPHHENEIAQSE A KFVN WMHSG +++N +KMSKS GNF TIRD LK+ N
Sbjct: 232 MFPHHENEIAQSEAANGKKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGD 291
Query: 295 ----EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA 350
E +RFF+LRSHYRS I++S + A ++LIRLY A+K+ P + +D NE +A
Sbjct: 292 KNGNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADD--NPLDWNEKYA 349
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
+F AM+DDFNT A+++LF+LA +N+ KS ++A+QL+ LG LG+L+ + F+K
Sbjct: 350 AQFKEAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLDPEAFVKGA 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + E ++ I R A+ KN+ AD+IR+EL+ I+LED P G T WR
Sbjct: 410 VDS-------VDEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLEDAPGGVTTWR 462
Query: 471 R 471
R
Sbjct: 463 R 463
>gi|326317611|ref|YP_004235283.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374447|gb|ADX46716.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 459
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/468 (50%), Positives = 316/468 (67%), Gaps = 18/468 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRWLR +
Sbjct: 2 SLRIYNTLSRAMEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + +I+ LT A ED L I+PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIRRAVERGITIRQLTDEMTAAMHEDIGALAIEPPTVEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNF 179
+L +I+ L GLAY+ +G DVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 122 MLSLIDTLERKGLAYRAGSG----DVNYAVRRFEGYGKLSGK--SLDELRAGERVAVQDD 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P E +W+S +G GRPGWHIECSAMSC LG FDIHGGG DL+
Sbjct: 176 KQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +WMH+GFV+++N+KMSKS GNF TIR++L++ + E +RF
Sbjct: 236 FPHHENEIAQSEGATGKPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVLQQVDAETLRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FI+R+HYRS +NYS+++L A+ SL RLY A+ + + ID +PHA RF AM++
Sbjct: 296 FIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGA-IDWADPHAARFKAAMDE 354
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LF+LA +N+ +S ++A L+ LG LGLL+ FL ++ V
Sbjct: 355 DFGTPEAVAVLFELAGEVNRTRSTRLAGLLKALGGCLGLLQGDPQAFL--------RQGV 406
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+I +I R+ A+ KNF EAD+IR +L+ GI+L+D P G T
Sbjct: 407 QLDAAEIAARIAARAAAKAAKNFAEADRIRNDLLAQGIVLKDSPAGTT 454
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/477 (49%), Positives = 309/477 (64%), Gaps = 28/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S KK+IF PI GKV +YVCG T YD+CH+GHAR MI FD++ R++R Y++
Sbjct: 2 LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A++NNES ++LT R I A +ED L L + PD +P AT ++ +I
Sbjct: 62 NYVRNITDVDDKIIKRAEENNESTQSLTERMIAAQREDELRLGNKMPDREPKATEFMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ M++ LI G AYQ +G DV Y F +YGKL+ R + + K+
Sbjct: 122 IDMVQVLIDKGFAYQGTSG----DVYYRATKFKDYGKLNNRKLEDMLAGARIDVEVAKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K E+ W+S WG GRPGWHIECSAMS LGSHFDIHGGG DLKFPH
Sbjct: 178 PADFVLWKQAKAG---EVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++VNYWMH G V++NN+KMSKS GNF T+RD+L K+NPEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKEYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPEVVRYLMV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH--AKRFIIAMNDD 360
S YRS I+YS+ L AK +L RLY A++ +++ + EP +RF AM DD
Sbjct: 295 SSQYRSAIDYSDQSLLEAKVALERLYTALRQ------QQVAESFEPTVFTERFEEAMKDD 348
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNT VA+S+LF+L +NK NK+ +A +LR L LGLL + FL+N+ +E
Sbjct: 349 FNTAVAVSVLFELVRELNKAKTEDANKASLLAAELRSLAELLGLLYQDPEYFLQNSTVSE 408
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E I+ I R++ARK KNF +D+IR EL + GI L D G T W R
Sbjct: 409 -----GLGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSREGTT-WTR 459
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 308/482 (63%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKIIA A +N ESI LT RFI A +D+ L PD P AT+YI
Sbjct: 61 WNVKYVRNITDIDDKIIARANENGESISALTERFIIAMNDDAARLGCLEPDEAPRATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY + NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGTAYPSENG----DVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI-NYKKIIDLNEPHAKRFIIA 356
R+FI+ SHYRS +N+S+ L AK +L R Y A K ++ K + L+ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDFALKEAKTTLSRFYHAFKAYQQVYGTKTVTTLDTSFVERFNAA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M+DDFNT AI++LF++ +N+ + Q LR L + L L++Y DEFLK+
Sbjct: 354 MSDDFNTAEAIAVLFEIIKELNRAVKEENEAQATIFYSTLRHLTHILALVQYDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E+ + SE +I+ I R +A+K K+F AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEQ---LGLSEAEIEDLIQQRVDAKKNKDFANADAIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|104781222|ref|YP_607720.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
gi|123079208|sp|Q1IBP9.1|SYC_PSEE4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|95110209|emb|CAK14916.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
Length = 460
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ F P+ V +YVCG+T YDYCHLGH R M+ FD++ RWLR + Y +
Sbjct: 2 LTIYNTLSKTKETFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRKSGYAL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLSILKPDLEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRKKIEDLRIGARIEVGESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P+ W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEPF---WDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A++ +P++ K E +RF +AMNDDF
Sbjct: 295 ASHYRSAINYSEDSLRDSKGALERFYHALRGLPRVAAKG----GEAFVERFTVAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG+ LG+L+ +DEFL+ E K
Sbjct: 351 TPEACAVLFDLVREINRLRESDVEAAAGLAGRLRELGDVLGVLQLDADEFLRAG--AEGK 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ E I+ ++ +AR KN+ E+D+IR ++ G++LED G T WR
Sbjct: 409 VDAAQVEALIQARL----QARADKNWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 466
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/477 (46%), Positives = 309/477 (64%), Gaps = 21/477 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L+IYN+ SR+K+ F P+ PGK+S+YVCGIT YDYCH+GHAR+++ FD++ ++LR +D
Sbjct: 2 ALQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E LT RFI ED L I PD +P AT +I Q
Sbjct: 62 VTYVRNITDIDDKIIKRANENGEQYTDLTKRFIDYMHEDEARLGIARPDIEPRATAFIDQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
I+ M + LI G AY +NG DV Y V F +YGKL+ + + E + K+
Sbjct: 122 IINMNQALIDKGYAYPASNG----DVYYRVTRFADYGKLTNKNVDELLVGARIEVDEIKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP DF LWK +K +P W S WG GRPGWHIECSAMS G+ FDIHGGG DL FP
Sbjct: 178 DPRDFVLWKAAKAGEP---AWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLPFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A K+VNYWMH+G V+++ +KMSKS GNF TIRD+L+KY+PEV+RF +
Sbjct: 235 HHENEIAQSEAANGCKYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLEKYHPEVVRFLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFIIAMNDD 360
+ SHYRS INY+E L A+ L R Y A++D + + +L + + F+ AMNDD
Sbjct: 295 VSSHYRSPINYAEDNLVEARTGLERFYGALRDYADVESLPLTELQASDYYRSFVAAMNDD 354
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNT VA++ ++DL +N ++ ++A +L+ LG LG+L+ + FL+ +
Sbjct: 355 FNTRVALASMYDLVRELNNAGKTDVERAQRLAGELKALGLILGILQENPRVFLQTGTSGQ 414
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ ++ + R +A+K KN+ AD++R++L +NGI++ED +G T+WRR
Sbjct: 415 ------IAAEEVDRLVAERIQAKKEKNYARADEVRKQLADNGILIEDAKDGTTQWRR 465
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 306/482 (63%), Gaps = 22/482 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IY+S S +K+ F P+ GKV +YVCG+T YDYCH+GHAR+M+ FD+V RWLR YDV
Sbjct: 10 ITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGYDV 69
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII AK N ESI LT RFIKA ED+ L + P+ +P AT++IPQ+
Sbjct: 70 NYVRNITDIDDKIINRAKDNGESIYELTDRFIKAMHEDADNLGCERPNSEPKATDFIPQM 129
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---K 180
+I+ L LAYQ GDV Y+V NF YGKLS R ++ +E+ N K
Sbjct: 130 QHLIQTLESKNLAYQG----ATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNVETDK 185
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
K+P DF LWK +K +P E +W S WG GRPGWHIECSAMS LG FDIHGGG DL+F
Sbjct: 186 KNPFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGHDLQF 245
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSEGA + N WMH GF+ ++ +KMSKS GNF TIRD++ +++PE IRFF
Sbjct: 246 PHHENEIAQSEGATGKTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMGQFHPETIRFF 305
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
IL SHYRS +N+S+ L A+ SL RLY A+K + + P F AM DD
Sbjct: 306 ILSSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEIDETPFETPFNQAMCDD 365
Query: 361 FNTPVAISILFDLANIINKNKSIKMAK----------QLRGLGNWLGLLEYSSDEFLKNN 410
FN+ A+S+LF LA INK +++ + L+ L L +L+ + +FL+
Sbjct: 366 FNSAGAVSVLFSLAREINKAVNLETVEGNAQALALATLLKDLAQPLNILQLNPTDFLQAK 425
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + S+++I+ I R +A+ K+F +AD+IR +L GI LED NG T WR
Sbjct: 426 V----GETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIELEDGKNGTT-WR 480
Query: 471 RI 472
R+
Sbjct: 481 RV 482
>gi|378949916|ref|YP_005207404.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
gi|359759930|gb|AEV62009.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens F113]
Length = 460
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R IKA ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIKAMHEDEARLNIRKPDLEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWASPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAG----GEAFVVRFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/475 (50%), Positives = 301/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LRIYN+ + +K+ F PI GK+ +YVCG T YD+CH+GHAR MI FD++ R LR +YD+
Sbjct: 2 LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHLDYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E LT R I+A QED L PPD +P AT ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGELPSDLTERMIEAQQEDEKALGNLPPDREPKATEFMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MI+ L+ G AYQ+++G DV Y F +YGKL+ R + E K+
Sbjct: 122 INMIKTLVDKGFAYQSDSG----DVFYRASRFTDYGKLNNRKLEEMLAGARVEVTESKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK K E+ W+S WG GRPGWHIECSAMS LG HFDIHGGG DLKFPH
Sbjct: 178 PADFVLWKPVKEG---EVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VNYWMH G V++NN+KMSKS GNF TIR++LK YNPEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVLKLYNPEVLRYLMV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS I+YS+ LN AK +L RLY A++D + D + RF A+NDDFN
Sbjct: 295 SSHYRSPIDYSDQSLNDAKVALERLYNALRDQSCSEIPESSD----YRTRFTAALNDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TPVA+S+LFDL +NK K+ +A +L L + LGLL +D FLKN +
Sbjct: 351 TPVALSVLFDLVRDLNKAKTESAELAETLAAELTNLASVLGLLYQDADYFLKNGTFDAE- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S +DI+ I R +ARK KNF +D+IR L GI L D G T W R
Sbjct: 410 ---GISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSREG-TSWTR 460
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6.1|SYC_DICNV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/476 (50%), Positives = 307/476 (64%), Gaps = 30/476 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L +YNS SR+K+ F+PITP V +YVCG+T YD+CH+GHAR+M+VFD + R LR +
Sbjct: 1 MSALHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y +TYVRNITDIDDKII A +NNE I+ LT RFI A ED L PP +P AT Y+
Sbjct: 61 YQLTYVRNITDIDDKIIRRAAENNEPIQALTQRFINAMHEDEAALGCLPPSIEPKATEYV 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEK 176
+++ MI +LI AY +NG DV YSVR+F YGKL+ R L + INE
Sbjct: 121 AEMIAMIGELIAQNHAYIADNG----DVYYSVRSFDEYGKLANRRLEDLRAGERIAINEA 176
Query: 177 NNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQ 236
N DPLDF LWK +K +P W S WGAGRPGWHIECS MS + LG HFDIHGGG
Sbjct: 177 KN---DPLDFVLWKKAKTGEP---SWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGM 230
Query: 237 DLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEV 296
DLKFPHHE EIAQSE K VNYW+H+GF+ I+N+KMSKS GNF T+RD+LK Y EV
Sbjct: 231 DLKFPHHECEIAQSEPVCGGKHVNYWLHNGFINIDNEKMSKSLGNFFTVRDVLKNYAGEV 290
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIA 356
IRFF+L+SHYR +NYS+ L AK+ L RLY A++ P ++ P+ +RF+ A
Sbjct: 291 IRFFMLQSHYRGPVNYSDAALEEAKRGLQRLYTALETAPTTGGAILL----PYQERFVAA 346
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAK---QLRGLGNWLGLLEYSSDEFLKNNIYT 413
M+DDFNTP AI++LF+LA ++NK + + A LR L LGL L + T
Sbjct: 347 MDDDFNTPQAIAVLFELAKMLNKAAAAEAADIAFTLRTLAARLGL--------LTGDAKT 398
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ S +I+ +I R A+ K++ AD IR++L GI L+D G T+W
Sbjct: 399 LFQQKGALSAAEIEAEIARRQAAKAAKDYATADSIREKLSALGIELKDSATG-TQW 453
>gi|404399554|ref|ZP_10991138.1| cysteinyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 460
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YD+CHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+IQ PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIQKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVPAAG----GEAFVERFTQAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + I +A +L+ L + LG+L+ +DEFL+
Sbjct: 351 TPEACAVLFEMVREINRLREIDIEAAAGLAARLKQLADVLGVLQLEADEFLQAGA----A 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARANKDWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|423692284|ref|ZP_17666804.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|388002211|gb|EIK63540.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 460
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDIDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARSNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 309/479 (64%), Gaps = 30/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ +++K+ F + PGKV +YVCG+T YDYCHLGHAR+++ FD+V R+LR YDV
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R I+A ED L + P+ +P AT +I I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPRATAFIDDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ MI+KLI G AY +NG DV ++V +F +YGKLS + L++ + E
Sbjct: 121 IAMIQKLIAGGHAYAADNG----DVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ P DFALWK +K P E+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 174 KRSPADFALWKAAK---PGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLL 230
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A H FV+ WMH+G +++N +KMSKS GNF TIR++L+KY EV+R+
Sbjct: 231 FPHHENEIAQSECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRY 290
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F++ SHYRS ++YSE L A ++L +LY A++ I + + + H +RF M+D
Sbjct: 291 FLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALRGIVPAKEADVAETD--HDRRFAEVMDD 348
Query: 360 DFNTPVAISILFDLANIIN-------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DFNT AI++L +AN IN + + + A L LG LGLL+ + + F + +
Sbjct: 349 DFNTAGAIAVLHAVANDINHYRREGDEEAAKRSAAVLVRLGAVLGLLQQNPEAFFQADTG 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+E + DI+ I R++ARK K+F EAD+IR +L+ GIIL+D G T WRR
Sbjct: 409 SE------LTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREGTT-WRR 460
>gi|422350108|ref|ZP_16430995.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657585|gb|EKB30471.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 468
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 306/485 (63%), Gaps = 33/485 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IY++ SR + F PI P V +YVCG+T YDYCH+GH R + FD+V+RWL +
Sbjct: 2 ALSIYSTLSRTQAPFAPIEPNHVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGMK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRNITD+DDKII A + + LT F +A QED L L P ++P AT+YIP+
Sbjct: 62 VTFVRNITDVDDKIIRRAAERGITTTELTEEFGRAMQEDMLALGCLAPTHEPRATDYIPE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLIS--SNFNKINEKNNFK 180
+L +IEKL G AYQ + +GDV+++VR F NYG+LSG+ I + +++ K
Sbjct: 122 MLGLIEKLEQKGYAYQGS----DGDVDFAVRKFENYGRLSGKSIDDLQSGARVDVAAG-K 176
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K P E +W SKWG GRPGWHIECSAMS +LG FDIHGGG DL F
Sbjct: 177 RDPLDFVLWKSAK---PGEPQWESKWGCGRPGWHIECSAMSAKILGDTFDIHGGGPDLIF 233
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINN-----KKMSKSFGNFCTIRDLLKKY--- 292
PHHENEIAQSE A F WMHSG +++ + +KMSKS GNF TIRD LK
Sbjct: 234 PHHENEIAQSEAASGVPFAKVWMHSGPLRVRDASGHEEKMSKSLGNFWTIRDALKDTEAA 293
Query: 293 -----NPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE 347
EV+RFF+LRS YRS I++S + A+K+L+RLY A+K + + +D +E
Sbjct: 294 YGEGNGAEVLRFFLLRSQYRSPISFSSALIEEAQKALVRLYGALKG--REAAEGEVDWSE 351
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFL 407
+A +F AM+DDFNTP+AI+ +F+LA IN+ + +QL+GLG L +L+ + FL
Sbjct: 352 KYAAQFKAAMDDDFNTPLAIAAMFELATEINRTGDPVLVRQLKGLGAVLNILQLDPENFL 411
Query: 408 KNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
K + E I I R EA+K KNF AD+IR+ L++ GI+L D P G T
Sbjct: 412 KGGAS-------DADEARINALIEERREAKKAKNFARADEIRKSLLDEGIVLMDGPQGTT 464
Query: 468 EWRRI 472
WRRI
Sbjct: 465 -WRRI 468
>gi|330810612|ref|YP_004355074.1| cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423698259|ref|ZP_17672749.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388005576|gb|EIK66843.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
Length = 460
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R IKA ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIKAMHEDEARLNILKPDLEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/481 (47%), Positives = 313/481 (65%), Gaps = 29/481 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IY+S S++K+ F PI GKV +YVCG+T YDYCHLGHAR+++ FDI+ R+LR YDV
Sbjct: 2 LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKI+ A+ N ES+ LT+RFI A ED L + P +P AT +I +I
Sbjct: 62 NYVRNITDVDDKILNRARDNGESVDALTARFIDAMHEDERALGVLSPTSEPRATGHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS-GRLISSNFNKINEKNNFKKD 182
+ MI++L+ G AY +NG DV YSV F +YGKLS +L E + K+
Sbjct: 122 IAMIQRLMDKGYAYHASNG----DVYYSVEQFADYGKLSKQKLDEIRAGARIEVDAEKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K P E+ W+S WG GRPGWHIECSAMS LG FDIHGGG DLKFPH
Sbjct: 178 PADFVLWKAAK---PGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A K+VNYWMH+G V++N +KMSKS GNF TIR++L KY EV+R+F+
Sbjct: 235 HENEIAQSEAATGCKYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILDKYPAEVVRYFLA 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKI--IDLNEP----HAKRFIIA 356
SHYRS I+YS++ L A+ L RLY +I+++ Y ++ + ++EP + +RF A
Sbjct: 295 SSHYRSAIDYSDVALEEARSGLERLYNSIREL----YGELGAVSMDEPLVGEYRERFHQA 350
Query: 357 MNDDFNTPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNT A+++LFD+A +N + +++ +AK + L LGLL+ + ++
Sbjct: 351 MDDDFNTSSAVAVLFDMAKAVNVAKKEDRTRALSLAKGMVDLAEVLGLLQADPESLMQG- 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
E ++ S +I+ I R+ AR K+F E+D+IR L G++L D G T W+
Sbjct: 410 ---EGEEVGGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSREG-TSWQ 465
Query: 471 R 471
R
Sbjct: 466 R 466
>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|218511865|sp|Q83BL7.2|SYC_COXBU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 460
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 316/477 (66%), Gaps = 27/477 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+++I+NS +++K+IF PI GKV LYVCG+T YDY H+GH R I+FD+V R+LR+ Y+
Sbjct: 2 SVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRNITDIDDKII A +N ES L RFI+ ED L + PD +P AT Y+P+
Sbjct: 62 VTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
I+K+I+KL+ N AY NG DV + VR F +YGKLS R + E ++ K+
Sbjct: 122 IIKLIQKLLDNQYAYTGQNG----DVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P +W+S WG GRPGWHIECSAMS +LG FDIHGGG DLKFP
Sbjct: 178 DPLDFVLWKKAKPGEP---KWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + FV WMH+G ++IN +KMSKS GN +IR+ LK+ + EV+R+F+
Sbjct: 235 HHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L HYR+ ++YS+ L + +L R YLA++ +P +N++K + RF AM+DDF
Sbjct: 295 LSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEK----TSSYTDRFYEAMDDDF 350
Query: 362 NTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
NTP+A ++LF++ IN+ K+ +A +L+ LGN GLL+YS ++FL+
Sbjct: 351 NTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA---- 406
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
KK + E IK I R+EAR +K++ AD+IR +L + G+ +ED +G T WR+
Sbjct: 407 -KKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG-TSWRQ 459
>gi|397687288|ref|YP_006524607.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
gi|395808844|gb|AFN78249.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
Length = 460
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 300/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ F P+ +V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YDV
Sbjct: 2 LSIYNTLSKTKEAFQPLEGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT +I +
Sbjct: 62 TYVRNITDIDDKIIRRANENGEPFEALVERMIAAMHEDEARLNVLRPDVEPRATQHIDGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+D
Sbjct: 122 FAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRRRIEDLKIGARIEVDEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL FPH
Sbjct: 178 PLDFVLWKAAKPGEP---SWQSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYQPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P++ E +RF AM+DDFN
Sbjct: 295 SSHYRSPINYSEDSLKEAKGALERFYTALRGLPEVAAAG----GENFVERFGAAMDDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
+P A ++LFD+A IN+ + +A +L+ LGN LG+L+ + D FL+ +
Sbjct: 351 SPEACAVLFDMAREINRLRDADPQAAAALAARLKELGNLLGVLQMNPDVFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIAARLQARAEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 309/479 (64%), Gaps = 30/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ +++K+ F + PGKV +YVCG+T YDYCHLGHAR+++ FD+V R+LR YDV
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R I+A ED L + P+ +P AT +I I
Sbjct: 61 HYVRNITDIDDKILRRADENGEVYTDLTDRMIRAMHEDEAKLGVLSPNDEPRATAFIDDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ MI+KLI G AY +NG DV ++V +F +YGKLS + L++ + E
Sbjct: 121 IAMIQKLIAGGHAYAADNG----DVYFAVESFPDYGKLSKKKLEDLVAGARVDVQEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ P DFALWK +K P E+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 174 KRSPADFALWKAAK---PGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLL 230
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A H FV+ WMH+G +++N +KMSKS GNF TIR++L+KY EV+R+
Sbjct: 231 FPHHENEIAQSECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILEKYPAEVVRY 290
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F++ SHYRS ++YSE L A ++L +LY A++ I + + + H +RF M+D
Sbjct: 291 FLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALRGIVPAKGADVAETD--HDRRFAEVMDD 348
Query: 360 DFNTPVAISILFDLANIIN-------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DFNT AI++L +AN IN + + + A L LG LGLL+ + + F + +
Sbjct: 349 DFNTAGAIAVLHAVANDINHYRREGDEEAAKRSAAVLVRLGAVLGLLQQNPEAFFQADTG 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+E + DI+ I R++ARK K+F EAD+IR +L+ GIIL+D G T WRR
Sbjct: 409 SE------LTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSREGTT-WRR 460
>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
gi|187629807|sp|A9KBJ2.1|SYC_COXBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
Length = 458
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 315/476 (66%), Gaps = 27/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++I+NS +++K+IF PI GKV LYVCG+T YDY H+GH R I+FD+V R+LR+ Y+V
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES L RFI+ ED L + PD +P AT Y+P+I
Sbjct: 61 TFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+K+I+KL+ N AY NG DV + VR F +YGKLS R + E ++ K+D
Sbjct: 121 IKLIQKLLDNQYAYTGQNG----DVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRD 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P +W+S WG GRPGWHIECSAMS +LG FDIHGGG DLKFPH
Sbjct: 177 PLDFVLWKKAKPGEP---KWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE + FV WMH+G ++IN +KMSKS GN +IR+ LK+ + EV+R+F+L
Sbjct: 234 HENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLL 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYR+ ++YS+ L + +L R YLA++ +P +N++K + RF AM+DDFN
Sbjct: 294 SGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEK----TSSYTDRFYEAMDDDFN 349
Query: 363 TPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP+A ++LF++ IN+ K+ +A +L+ LGN GLL+YS ++FL+
Sbjct: 350 TPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA----- 404
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
KK + E IK I R+EAR +K++ AD+IR +L + G+ +ED +G T WR+
Sbjct: 405 KKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG-TSWRQ 457
>gi|387894410|ref|YP_006324707.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|387159469|gb|AFJ54668.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
Length = 460
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDIDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARSNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|187629808|sp|A9N924.1|SYC_COXBR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
Length = 458
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/476 (47%), Positives = 315/476 (66%), Gaps = 27/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++I+NS +++K+IF PI GKV LYVCG+T YDY H+GH R I+FD+V R+LR+ Y+V
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES L RFI+ ED L + PD +P AT Y+P+I
Sbjct: 61 TFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+K+I+KL+ N AY NG DV + VR F +YGKLS R L E ++ K+D
Sbjct: 121 IKLIQKLLDNQYAYTGQNG----DVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSDSKRD 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P +W+S WG GRPGWHIECSAMS +LG FDIHGGG DLKFPH
Sbjct: 177 PLDFVLWKKAKPGEP---KWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE + FV WMH+G ++IN +KMSKS GN +IR+ LK+ + EV+R+F+L
Sbjct: 234 HENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLL 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYR+ ++YS+ L + +L R YLA++ +P +N++K + RF AM+DDFN
Sbjct: 294 SGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEK----TSSYTDRFYEAMDDDFN 349
Query: 363 TPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP+A ++LF++ IN+ K+ +A +L+ LGN GLL+YS ++FL+
Sbjct: 350 TPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA----- 404
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
KK + E IK I R+EAR +K++ AD+IR +L + G+ +ED +G T WR+
Sbjct: 405 KKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG-TSWRQ 457
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/472 (48%), Positives = 306/472 (64%), Gaps = 24/472 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IY+S +R K+ F PI P V +YVCG+T YD CH+GHAR+M+VFD+V R+ R + Y+V
Sbjct: 2 LVIYDSHARAKREFVPIKPKTVGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ESI++LT R+I+A +D+ L P +P AT + +
Sbjct: 62 HYVRNITDIDDKIIARAAENKESIRSLTERYIEAMHDDAAALGCLLPTAEPRATESVGDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ MIE LI G AY+ NGDV + V F YG+LS R L + +I+E
Sbjct: 122 VAMIESLIERGHAYR----AANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDEA--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK K DP W++ +G GRPGWHIECSAMS LG+ FDIHGGGQDL+
Sbjct: 175 KTDPLDFVLWKAEKPGDP---SWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A H +VNYWMH+GFV+IN +KMSKS GNF T+ +++++Y+PEVIR
Sbjct: 232 FPHHENEIAQSECATGHHYVNYWMHNGFVRINEEKMSKSLGNFFTVAEVMRQYHPEVIRL 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYS+ L+ A+ SL R Y AIKD P+ N RF M+D
Sbjct: 292 FVLSSHYRSPLNYSDQNLDAARASLTRWYTAIKDAPQNGTP-----NPEVMARFRGVMDD 346
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFNTP A++I+F+ + +N++K A ++ +G L L ++ + FL+ +
Sbjct: 347 DFNTPEALAIVFEQISELNRSKDANCAATIKAIGEILNLGQHDPESFLR----WAPSSSD 402
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ I+ KI R+ AR K+F +D+IR EL GI+LED G+T WRR
Sbjct: 403 QLSDEAIEQKIAERASARANKDFAASDRIRDELQAAGIVLEDKA-GQTTWRR 453
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/478 (48%), Positives = 317/478 (66%), Gaps = 23/478 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L+I+N+ +++K+ F PI G+V+LYVCG+T YD+CH+GHAR+M+VFD+V R+L+
Sbjct: 1 MSALKIHNTLTKQKETFVPINKGEVNLYVCGMTVYDFCHIGHARVMVVFDVVSRYLKYLG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V YVRNITDIDDKII + ++ E K LT RFI +D L++ PD +P AT+ +
Sbjct: 61 YNVKYVRNITDIDDKIITRSIESGEDFKQLTKRFIDEMHQDEASLNVLSPDIEPLATDSM 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
I+ MIE+LI N AY N DV Y V +F NYG+LSGR L N + + ++
Sbjct: 121 EAIITMIEQLIANDNAYVGPNN----DVYYCVESFENYGQLSGRKLDDMNAGERVDVDSS 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P DF LWK +K ++P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+
Sbjct: 177 KRNPFDFVLWKSAKPDEP---SWSSPWGNGRPGWHIECSAMATCCLGNHFDIHGGGMDLQ 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A K+VN WMH+GFV+I+++KMSKS GNF T+RD+LKKY E IRF
Sbjct: 234 FPHHENEIAQSEAATGEKYVNTWMHNGFVRIDDEKMSKSLGNFFTVRDVLKKYRGEEIRF 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYS+ L ++ +L RLY A++D+ + ++ + ++F AMND
Sbjct: 294 FVLSSHYRSPLNYSDDQLTESRSALERLYTALRDVTPVKN----EVKSTYIEQFENAMND 349
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFN+ AI++LF+ AN +NK ++ K A L + LGLL D FLK +
Sbjct: 350 DFNSAKAIAVLFECANELNKLKHTQPEQAAKTAADLLTMAEPLGLLSQDPDLFLK----S 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ + S +I+ +I R EA+ KN+ AD+IR L G+ILED +T WRR
Sbjct: 406 MAGQDASISNEEIEAQINQRLEAKANKNWGLADQIRDSLKEQGVILED-KGPETTWRR 462
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/478 (49%), Positives = 310/478 (64%), Gaps = 21/478 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+S L+IYN+ SR+K+ F PITPGK+ +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 40 VSMLKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLG 99
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YD+TYVRNITD+DDKII A +NNE+ LTSR + +D L+I PD++P AT++I
Sbjct: 100 YDLTYVRNITDVDDKIIKRAAENNETCDALTSRMLIEMYKDFDALNILRPDFEPNATHHI 159
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
+I+ + E+L+ G AY +NG DV +++ + +YG LS + L E +
Sbjct: 160 KEIIALTERLLKRGHAYIADNG----DVMFAINSDPDYGLLSRQDLEQLQAGARVEVADV 215
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++PLDF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 216 KRNPLDFVLWKMSKPNEP---SWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLM 272
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A +VNYWMH+G V ++ +KMSKS NF TIRD+L Y+ E +R+
Sbjct: 273 FPHHENEIAQSTCANDGPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLAHYDAETVRY 332
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L HYRS +NY+E L A+ SL RLY A++D N+ K D NE +RF+ AMND
Sbjct: 333 FLLSGHYRSQLNYTEENLKQARTSLERLYTALRDT-DANHVKSAD-NEIFKQRFMAAMND 390
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A S+LFDLA IN+ K MA QLR L N LGLL + ++FL++
Sbjct: 391 DFNTPEAYSVLFDLAREINRLKVDDMAMANELAVQLRQLANILGLLTQNPEQFLQSRAQV 450
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ E IK R++ARK K + +AD R EL GIILED P G T WRR
Sbjct: 451 SHSAEIEKIEALIKQ----RNDARKNKFWAQADSARDELTRMGIILEDSPQG-TVWRR 503
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 308/475 (64%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITD+DDKII A +N ES LT R I D L +Q PD +P AT +I +I
Sbjct: 62 TFVRNITDVDDKIIKRAAENAESCDALTERLIGDMHADFDALKLQRPDIEPRATQHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ +++ L+ AY ++G DV +S+ +F YG+LSG+ I + K++
Sbjct: 122 ITLVQSLLDQNYAYVADSG----DVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEESKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W+S WGAGRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSKPGEPM---WDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHHTPYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS++ L A+ SL RLY A++ + + ++ L+ P +RF AM+DDFN
Sbjct: 295 SGHYRSPLNYSDLNLQQARASLERLYTALRGVE--DGEEQAALSAPFDERFKAAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA +N+ K ++ +A LR LG LGLL+ ++FL++ E
Sbjct: 353 TPEAYSVLFDLARDLNRAKQDSPADAVALAACLRRLGGVLGLLQQQPEQFLQSGAAAETD 412
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+L I R++AR KN+ AD+ R +L GI+LED P G T WRR
Sbjct: 413 DVA-----EIELLIKTRNDARASKNWALADEARNKLTEMGIVLEDGPQGTT-WRR 461
>gi|423094541|ref|ZP_17082337.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397886248|gb|EJL02731.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 460
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R I+A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMIQAMHEDEARLNILKPDLEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVPPAG----GEGFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARTNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|359799491|ref|ZP_09302052.1| cysteinyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
gi|359362595|gb|EHK64331.1| cysteinyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
Length = 484
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 306/490 (62%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L ++ PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEFYIDAMHADERALGVETPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ ++G DVNY+VR F YGKLSG+ + + E+ + K
Sbjct: 122 LDIIGKLEQNGLAYQADDG----DVNYAVRGFAGYGKLSGKTLDDL--RAGERVAVGSSK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP------ 294
PHHENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR + + P
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVAQSEPAADQAQ 295
Query: 295 --------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
E++RFFI+R+HYRS NY+ L A+ +L RLY A++++P + ID N
Sbjct: 296 YQVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADG--QGIDWN 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ NK KS + A Q++ L + LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANKTKSARSAGQMKALASLLGLLQQEPAAY 413
Query: 407 LK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ + E+ I+ I R+ A+ +NF EAD+IR EL GI L+D
Sbjct: 414 FQSPTRYSAAAIEQGARSTLDAAAIQTMIDARAAAKAARNFAEADRIRAELREAGIELDD 473
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 474 KPGGLTQWRR 483
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/488 (47%), Positives = 308/488 (63%), Gaps = 28/488 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L IY+S + +KQ F P+ GKV +YVCG+T YDYCH+GHAR+M+ FD+ RWL
Sbjct: 11 MSQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLG 70
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDV YVRNITDIDDKII A +N E I TLT RFI A ED+ L PD +P AT++I
Sbjct: 71 YDVNYVRNITDIDDKIITRAAENGEEIGTLTQRFITAMHEDATALGCLSPDAEPRATDHI 130
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
++ +MIE L+ N AY +NG DV Y+V +F +YGKLS R L E N
Sbjct: 131 DEMQQMIETLVSNDYAYAGDNG----DVYYAVDSFADYGKLSKRNLDDMQAGSRVEVEND 186
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P DF LWK +K ++P +W S WG GRPGWHIECSAMS LG+ FDIHGGG DL+
Sbjct: 187 KRNPFDFVLWKAAKPDEP---QWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 243
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A ++ WMH GF+ ++ +KMSKS GNF TIRD++ KY PE +RF
Sbjct: 244 FPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYLPETVRF 303
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH---------A 350
F+L SHYRS +N+S+ L+ + SL RLY A+K + + K++ ++E
Sbjct: 304 FLLSSHYRSQVNFSDSALDESHNSLSRLYQALK-VAEQQKGKVLIIDEALINNAYASAVG 362
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSS 403
+ FI AMNDDFN+ AIS+LF LA INK + ++A+ L+ L L +L+
Sbjct: 363 QDFIKAMNDDFNSSTAISVLFGLARDINKASKAQDVETAWQLAQHLKALAQTLNILQQPV 422
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
+FL+ I + ++ ++ I I R++A+ KNF AD+IR +L GI LED
Sbjct: 423 QQFLQAVIGEVAEDSL--TDEAIDGLIIERADAKTNKNFARADEIRVQLKEAGIELEDSR 480
Query: 464 NGKTEWRR 471
G T WRR
Sbjct: 481 AGTT-WRR 487
>gi|422650242|ref|ZP_16713048.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330963331|gb|EGH63591.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 460
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDVLTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIEKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P + E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPAADPAG----GEAFVERFTAAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----Q 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|187479046|ref|YP_787070.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
gi|109894885|sp|Q2KX38.1|SYC_BORA1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|115423632|emb|CAJ50172.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
Length = 483
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/490 (46%), Positives = 310/490 (63%), Gaps = 31/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P+ G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + Y V
Sbjct: 2 LHIYNTLSRTKETFKPVHAGEVRIYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + + +T FI A D L ++ PD++P AT Y+ ++
Sbjct: 62 NYVRNITDIDDKIIRRAVQTGRRMHEVTDYFIAAMHADERALAVERPDHEPRATAYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ +I +L NGLAYQ + +GDVNY+VR F YGKLSG+ S + + E+ + K
Sbjct: 122 IDIIGRLEKNGLAYQAD----DGDVNYAVRGFQGYGKLSGK--SLDDLRAGERVAVGSSK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P E +W+S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKEEEPPETKWDSPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK---------- 290
PHHENEIAQ+EGA+ N WMH G + ++ +KMSKS GNF TIR +
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDAEKMSKSLGNFRTIRQTIAQGEAQDGEAD 295
Query: 291 -KYNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDL 345
+ NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+ ++ P + ID
Sbjct: 296 YQANPREAEMLRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALANVTPDV---AGIDW 352
Query: 346 NEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
NE A+ F AMNDDFN+ A++ LF+LA +N+ + + A QL+ LG LGLL+
Sbjct: 353 NEAQAQAFKAAMNDDFNSSGAVAALFELAGQVNRERDSRAAGQLKALGAVLGLLQQDPAV 412
Query: 406 FLKNNI-YTERKKNVNYSEND---IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ +++ Y+ S+ D I+ I R +A+ ++F AD IR EL GI L+D
Sbjct: 413 YFQSSTRYSSAGMQQGASQMDAARIEALIAERGQAKLSRDFARADAIRAELRAAGIELDD 472
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 473 KPGGMTQWRR 482
>gi|430377175|ref|ZP_19431308.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
gi|429540312|gb|ELA08341.1| cysteinyl-tRNA ligase [Moraxella macacae 0408225]
Length = 470
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/483 (50%), Positives = 312/483 (64%), Gaps = 24/483 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L +Y++ + KK+ F PI GKV LYVCG+T YDYCH+GHAR+M+ FD++ RWL
Sbjct: 1 MSDLHLYDTLTAKKRPFTPIEDGKVGLYVCGMTVYDYCHIGHARVMVSFDVIYRWLS-RF 59
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y V YVRNITDIDDKII A +N ESI TLT RF KA ED+ L P ++P AT+YI
Sbjct: 60 YQVNYVRNITDIDDKIIKRAGENGESIFTLTERFTKAMHEDADNLGCLRPTHEPKATDYI 119
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNF 179
PQ+L MI L LAYQ ++G DV Y V NF +YGKLS R ++ I + +
Sbjct: 120 PQMLNMITTLQNKQLAYQGDSG----DVYYKVENFADYGKLSKRRLADMQAGIRVDTADD 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P DF LWK +K ++P E +W S +G GRPGWHIECSAMS LG +FDIHGGG DL+
Sbjct: 176 KQNPFDFVLWKSAKESEPDETKWQSPFGQGRPGWHIECSAMSTCCLGDNFDIHGGGHDLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA + + N W+H GFV ++ +KMSKS NF TIRD+LK ++ EVIRF
Sbjct: 236 FPHHENEIAQSEGATQKPYANNWLHVGFVNVDGEKMSKSLNNFFTIRDVLKDFHAEVIRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID---LNEPHAKRFIIA 356
F+L SHYRS IN+S+ L A SL RLY A+K + + IID + + F A
Sbjct: 296 FMLSSHYRSPINFSDTALKEAHASLSRLYHALKLFH--DDEIIIDECVWQSDYGQAFSRA 353
Query: 357 MNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
M+DDFNTP A+S+LF L INK +KS +AK L+ L L + + +EFL+
Sbjct: 354 MHDDFNTPKALSVLFQLVGEINKAFKNNELDKSKHLAKILKTLAEPLNIAQAGPNEFLQK 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
++ + SE +I KI R++A+ KNF AD+IR EL GI LED G T W
Sbjct: 414 SLNAD-----GLSETEILAKIDARTQAKIDKNFTLADQIRDELNAQGIELEDSRAG-TMW 467
Query: 470 RRI 472
RRI
Sbjct: 468 RRI 470
>gi|386287683|ref|ZP_10064854.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
gi|385279193|gb|EIF43134.1| cysteinyl-tRNA synthetase [gamma proteobacterium BDW918]
Length = 467
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 302/482 (62%), Gaps = 30/482 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
T++IYN+ SR KQ P+ GK+ +YVCG+T YDYCHLGHAR+++ FD++ R+LR ++
Sbjct: 2 TIQIYNTLSRSKQPLKPLQDGKIGMYVCGMTVYDYCHLGHARVLVAFDVITRYLRAKAFE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITDIDDKI+ A +N E + LT RFI A ED+ L I PD +P AT +I
Sbjct: 62 VNYVRNITDIDDKILRRATENGEPYEALTERFIVAMNEDAERLGIIAPDREPRATAHIGD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNN 178
I+ MI +LI G AYQ +NG DV Y V F +YGKLSG+ L+S ++E
Sbjct: 122 IIAMITRLIATGHAYQASNG----DVYYRVTAFADYGKLSGKKPDELLSGARIAVDEA-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K DP DFALWK + W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 176 -KDDPRDFALWKAVNDG---TTSWPSPWGEGRPGWHIECSAMSTCCLGETFDIHGGGPDL 231
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSE A K+ WMH+G V+++N+KMSKS GNF TIR++L KY+PEV+R
Sbjct: 232 VFPHHENEIAQSEAATGKKYAQTWMHAGAVRVDNEKMSKSLGNFFTIREILDKYHPEVVR 291
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH--AKRFIIA 356
+F++ SHYRS INYSE L AK++L R Y A K +P + DL + + +RF A
Sbjct: 292 YFLISSHYRSAINYSEENLQIAKQNLERFYHAYKGLPPVTLIAYADLPQENDFVQRFDAA 351
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI-------KMAKQLRGLGNWLGLLEYSSDEFLKN 409
M DDFN P+A+++L+D+ +N K +A+ L+ L LG+L+ +D+FL++
Sbjct: 352 MADDFNVPLAVAVLYDMVRELNTAKEAGNSERINSLAQLLKSLAAVLGVLQLEADDFLQS 411
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ I+ I R +A+K + F AD+IR L G+ILED G T W
Sbjct: 412 GSADQ------LDAASIEALIAERVQAKKDRQFARADEIRDSLKAQGVILEDSREGTT-W 464
Query: 470 RR 471
RR
Sbjct: 465 RR 466
>gi|344199257|ref|YP_004783583.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343774701|gb|AEM47257.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 462
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 315/479 (65%), Gaps = 29/479 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ L +Y++ R K + P V LYVCG+T YD+CHLGHAR+M+ FD+V R+LR
Sbjct: 4 LPVLTLYDTLRRGKTPLEVLRPNHVELYVCGMTVYDFCHLGHARVMVTFDMVVRYLRERG 63
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A + ESI++LT+RFI A ED L Q PD +P AT ++
Sbjct: 64 YEVTYVRNITDIDDKIIRRAVERGESIQSLTARFIDAMHEDEAALLCQRPDQEPRATEHV 123
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLIS--SNFNKINEKNN 178
+ +I +LI G AY NGDV Y+VR+F YG+LSG+ I ++ +++ +
Sbjct: 124 GAMQTLIGELINRGHAY----AAANGDVYYAVRSFPEYGRLSGKSIDELTSGARVDVGED 179
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDFALWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 180 -KRDPLDFALWKAAKPGEP---SWPSPWGEGRPGWHIECSAMSADALGCAFDIHGGGADL 235
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS+GA F +YWMH+GFV+IN++KMSKS NF T+R+LL +Y+ EV+R
Sbjct: 236 QFPHHENEIAQSQGA-GCAFAHYWMHNGFVRINDEKMSKSLNNFFTVRELLPRYSGEVLR 294
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FFIL SHYRS +NY E L AK L RLY A++ +P K +++L +RF AM+
Sbjct: 295 FFILSSHYRSPLNYGEEALEQAKAGLTRLYTALRGMP--GRKIVVELGSEWRERFHAAMS 352
Query: 359 DDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDF+TP A+++LFDLA +N+ + + +A LR L LGLL+ +++FL+ +
Sbjct: 353 DDFHTPAALAVLFDLAREMNRLRDEGSEVAAPLATLLRELAGVLGLLQQDAEDFLRGD-- 410
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N ++ I+ +I R+ AR+ ++F AD IRQEL G+ILED P G T WR+
Sbjct: 411 ---ATNTHW----IEERIAARAAARRTRDFAGADGIRQELTAAGVILEDGPGGTT-WRQ 461
>gi|422591326|ref|ZP_16665971.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330878748|gb|EGH12897.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 460
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P + E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPAVEPAG----GEAFVERFTAAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETGVTAAAGLAARLKQLACVLGVLQLEADDFLRAGA----Q 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 305/475 (64%), Gaps = 18/475 (3%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYNS + +K+ F PI PG+V +YVCG+T YDYCHLGHAR M+VFD V R+LR Y V
Sbjct: 2 LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGYRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A + E + LT RFI A D+ L PD +P AT Y+ I
Sbjct: 62 DYVRNITDVDDKIIRRAAELGEPVNVLTERFIAAMHADTAALGCLLPDAEPRATAYMDAI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG-RLISSNFNKINEKNNFKKD 182
+ +I++L+ G AYQ + G + Y+V F YG+LSG RL + E K+D
Sbjct: 122 VALIQRLLDRGYAYQAVD---EGSIYYAVERFEGYGRLSGERLEALRAGARVEPGAGKRD 178
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
DF LWK +K +P W + WG GRPGWHIECSAM+ LG HFDIHGGG DLKFPH
Sbjct: 179 AADFVLWKAAKPGEP---SWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKFPH 235
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A+ ++VN+WMH+G ++IN++KMSKS GNF T+R++L+ Y E IR+F+L
Sbjct: 236 HENEIAQSEAAWGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYRAEEIRYFLL 295
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYS L+ ++ +L RLYLA++D+P L P+ + F AM+DDFN
Sbjct: 296 SSHYRSPLNYSTSDLDNSRAALERLYLALRDLPFTEASPA--LAAPYREAFRQAMDDDFN 353
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP+A+++LFDLA IN+ +++ +A LR LG LGL + + + FLK +
Sbjct: 354 TPLALAVLFDLAREINRRRDRFESQAAALAATLRELGGLLGLAQVAPEVFLKGGAGS--S 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V + ++ + R+ ARK ++F AD+IR EL GI LED P G T WRR
Sbjct: 412 VAVGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDTPQG-TAWRR 465
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/471 (47%), Positives = 299/471 (63%), Gaps = 23/471 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ G+V +YVCGIT YDYCH+GHAR+M+ FD++ R+LR ++V
Sbjct: 1 MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFEV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A++N+E I LT R I A ED L + PD +P AT ++ I
Sbjct: 61 DYVRNITDIDDKILKRAEENDEPIAALTERMIAAMHEDEGRLGVLRPDREPRATAHVDDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+++LI G AY NGDV Y VR F YGKLS R L E K+D
Sbjct: 121 VAMVQRLIDKGYAYP----AANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVETAKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 177 PLDFVLWKAAK---PGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VN WMH+G V+++ +KMSKS GNF TIR++L+ + PEV+R+ +L
Sbjct: 234 HENEIAQSEAATGRPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAHAPEVVRYLLL 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INY+ L+ A++SL R Y A++ + + + E RFI AM+DDFN
Sbjct: 294 ASHYRSPINYAPDALSDARRSLERFYNALQGVAPVAGEVAAGYRE----RFIAAMDDDFN 349
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
T A+++LFDLA +N+ K +A +L+ LG LGL + FL+
Sbjct: 350 TAEALAVLFDLARELNRAKQEAPAHAPALAHELKELGGVLGLFGQDPEGFLQAG-----A 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
+ SE DI+ +I R++A+K K+F AD IR EL GI+L+D +G T
Sbjct: 405 GRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGRDGTT 455
>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas protegens Pf-5]
gi|109894922|sp|Q4K9S1.1|SYC_PSEF5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68345570|gb|AAY93176.1| cysteine--tRNA ligase [Pseudomonas protegens Pf-5]
Length = 460
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD++ RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGEAFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HTMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +PK+ E +RF MNDDF
Sbjct: 295 ASHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G+ILED G T WR
Sbjct: 407 GRVDGAQ--VEALIQARLAARANKDWAESDRIRDQITAMGVILEDGKGGTT-WR 457
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/479 (48%), Positives = 313/479 (65%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL+ GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLEDGPNGTT-WRK 458
>gi|77459860|ref|YP_349367.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
gi|109894924|sp|Q3KA28.1|SYC_PSEPF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77383863|gb|ABA75376.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
Length = 460
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +PK+ E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/458 (49%), Positives = 297/458 (64%), Gaps = 34/458 (7%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GHAR+M+VFD+V R+LR + YDVTY+RNITDIDDKII A +N E+
Sbjct: 1 MYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGYDVTYIRNITDIDDKIIKRAAENGET 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I+TLT R+IK D+ L + PD +P AT + +L MI+ LI GLAY NG
Sbjct: 61 IQTLTDRYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFKKDPLDFALWKVSKNNDPYEIRWN 203
DV Y V F YGKLSGR + + E+ N K DPLDF LWK +K P E W+
Sbjct: 117 DVYYDVSEFSGYGKLSGRQVDDL--RAGERIAVNEAKTDPLDFVLWKAAK---PEEPAWD 171
Query: 204 SKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWM 263
S WG GRPGWHIECSAMS LG HFDIHGGGQDL+FPHHENEIAQSEGA+ + VNYWM
Sbjct: 172 SPWGPGRPGWHIECSAMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWM 231
Query: 264 HSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKS 323
H+GFV+I+++KMSKS GNF T+R++L KY E +R+FIL SHYRS +NY+E L AK +
Sbjct: 232 HNGFVRIDDEKMSKSLGNFFTVREVLAKYPAEAVRYFILMSHYRSPLNYAEDQLEQAKTA 291
Query: 324 LIRLYLAIKDIP--KINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN--- 378
L R Y +++D+ +++++ + A RF AM+DDFNT +A+S+L D+ +N
Sbjct: 292 LTRFYHSLRDVTPETVSWREDAEF----ASRFAEAMDDDFNTALALSVLADVRQALNIAR 347
Query: 379 ----KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRS 434
+ KS +A L G LGL + S++ FL E K I+ I R+
Sbjct: 348 EENDEQKSAYLAGLLLAFGEVLGLFQQSAEAFLTGGQQDEAGK--------IEQLIAERN 399
Query: 435 EARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
AR K++ AD++R EL GI+LED GKT WR+I
Sbjct: 400 AARAAKDWSRADQVRDELTAMGIVLEDAA-GKTSWRKI 436
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 307/472 (65%), Gaps = 26/472 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+FSR+K++F PI+ KV LYVCG+T YD CH+GH RL I FD+V R+LR Y V
Sbjct: 2 LHIYNTFSRQKELFKPISTPKVGLYVCGLTVYDNCHIGHGRLFIWFDVVVRYLRSVGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++ N +TLT R I + D L + PPD++P T +IPQI
Sbjct: 62 TYVRNITDIDDKIIKRAQELNIDYQTLTQRMIDSMHTDEKSLDVIPPDFEPRVTEHIPQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ +I+ LI AY G DV Y V F YGKL+ + ++S I E + K+D
Sbjct: 122 VDLIQTLINKDFAYVTKTG----DVYYEVAKFKAYGKLAHQDLNSLRTGIRVETSEDKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K N+P+ W S WG GRPGWHIECSAM+ LG +FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKPNEPF---WPSPWGNGRPGWHIECSAMAKKYLGENFDIHGGGNDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
H+NE+AQSE A FVNYWMH GFV++N +KMSKS GNF +++ LKKY+PE++R+F++
Sbjct: 235 HQNELAQSEAANGCCFVNYWMHMGFVQVNQEKMSKSLGNFFVLKEALKKYHPEILRYFVV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHY+S IN+SE L A +L R Y+ ++D+P N K D KRF AM+DDFN
Sbjct: 295 ASHYQSPINFSENNLENAHAALQRFYITLRDLPIANTKD-FDPKNQFNKRFHAAMDDDFN 353
Query: 363 TPVAISILFDLANIINKNK---SIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP A+++LFDLA IN+ + + +A Q L+ LG LG+L+ ++FLK I
Sbjct: 354 TPEALAVLFDLAREINRLRNADQLSLAAQHGALLKHLGWILGILQDDPEKFLKAGI---- 409
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
EN I+ I R+ ARK KN+ EAD+IR EL I LED PNG T
Sbjct: 410 ------DENKIQSLINARNAARKDKNWAEADRIRGELTAMRITLEDTPNGTT 455
>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|428784474|ref|ZP_19001965.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|426276036|gb|EKV53763.1| cysteine tRNA synthetase [Erwinia amylovora ACW56400]
Length = 502
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/480 (48%), Positives = 305/480 (63%), Gaps = 26/480 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+S L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R FD+V R+LR +
Sbjct: 39 VSMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSG 98
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y + YVRNITDIDDKII A +N ESI+ LT R I +D L+I PPD +P AT +I
Sbjct: 99 YQLNYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHI 158
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
+I++++EKLI AY +NG DV +SV + L YG LS + + ++ +
Sbjct: 159 AEIIELVEKLIAREHAYVASNG----DVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTAD 214
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL
Sbjct: 215 VKRNPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 271
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L+ Y+ E +R
Sbjct: 272 MFPHHENEIAQSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVR 331
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NY E LN A+ +L RLY+A+++ + E RF AM+
Sbjct: 332 YFLMSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTGATPAGGEEFEARFRAAMD 388
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S LFDLA +N+ K+ +A +LR LG LGLLE ++FL++
Sbjct: 389 DDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQSG-- 446
Query: 413 TERKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
NVN E I+ I R +ARK KN+ +AD R L GI+LED G T WRR
Sbjct: 447 ----ANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 501
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/479 (48%), Positives = 314/479 (65%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GADQSAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I++ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 310/475 (65%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E A+ F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVVFGGENFAETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAVRLRELGAILGLLQQDPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|421484511|ref|ZP_15932079.1| cysteinyl-tRNA ligase [Achromobacter piechaudii HLE]
gi|400197006|gb|EJO29974.1| cysteinyl-tRNA ligase [Achromobacter piechaudii HLE]
Length = 484
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 310/490 (63%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L ++ PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTDFYIAAMHADEQALGVESPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ ++G DVNY+VR F YGKLSG+ + + E+ + K
Sbjct: 122 LDIIGKLEKNGLAYQADDG----DVNYAVRGFPGYGKLSGKTLDDL--RAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKAEEPDDTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP------ 294
PHHENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR + + +P
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGDPAADVAS 295
Query: 295 --------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
E++RFFI+R+HYRS NY+ L A+ +L RLY A++++ + + ID N
Sbjct: 296 YPVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVAADD--QGIDWN 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ AI+ LF+LA+ N+ KS + A QL+ L + LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAIAALFELASEANRGKSARSAGQLKALASLLGLLQQDPATY 413
Query: 407 LK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ + E+ + + I+ I R+ A+ +NF EAD+IR EL + GI L+D
Sbjct: 414 FQSPTRYSAAAIEQGQRATLDADAIQSLIDARAAAKAARNFAEADRIRAELRDAGIELDD 473
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 474 KPGGLTQWRR 483
>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 507
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/480 (48%), Positives = 305/480 (63%), Gaps = 26/480 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+S L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R FD+V R+LR +
Sbjct: 44 VSMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSG 103
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y + YVRNITDIDDKII A +N ESI+ LT R I +D L+I PPD +P AT +I
Sbjct: 104 YQLNYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHI 163
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNN 178
+I++++EKLI AY +NG DV +SV + L YG LS + + ++ +
Sbjct: 164 AEIIELVEKLIAREHAYVASNG----DVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTAD 219
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL
Sbjct: 220 VKRNPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 276
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L+ Y+ E +R
Sbjct: 277 MFPHHENEIAQSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVR 336
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NY E LN A+ +L RLY+A+++ + E RF AM+
Sbjct: 337 YFLMSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTGATPAGGEEFEARFRAAMD 393
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S LFDLA +N+ K+ +A +LR LG LGLLE ++FL++
Sbjct: 394 DDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQSG-- 451
Query: 413 TERKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
NVN E I+ I R +ARK KN+ +AD R L GI+LED G T WRR
Sbjct: 452 ----ANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 506
>gi|293606585|ref|ZP_06688941.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
gi|292814970|gb|EFF74095.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
Length = 484
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 313/490 (63%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + + I +T +I A D L ++ PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETSRRIGDVTDFYIAAMHADEQALGVESPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ ++G DVNY+VR F YGKLSG+ + + E+ + K
Sbjct: 122 LDIIGKLEQNGLAYQADDG----DVNYAVRGFPGYGKLSGKTLDDL--RAGERVAVGSSK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K ++P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKADEPADTKWESPYGMGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK---------- 290
PHHENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR +
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVALGEPAADDAN 295
Query: 291 -KYNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
+ NP E++RFFI+R+HYRS+ NY+ L A+ +L RLY A++++P + + ID N
Sbjct: 296 YRVNPREAEMVRFFIVRNHYRSSQNYTPDNLVDAQNALDRLYQALQNVPADD--QGIDWN 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N++KS + A QLR L LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRSKSARAAGQLRALAAVLGLLQQDPAAY 413
Query: 407 LK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ + E+ + I+ I R+ A+ ++F EAD+IR EL + GI L+D
Sbjct: 414 FQSPTRYSAAAIEQGQRATLDAAAIQTLIDARAAAKAARDFAEADRIRAELRDAGIELDD 473
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 474 KPGGLTQWRR 483
>gi|337279178|ref|YP_004618650.1| cysteinyl-tRNA synthetase [Ramlibacter tataouinensis TTB310]
gi|334730255|gb|AEG92631.1| candidate cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
[Ramlibacter tataouinensis TTB310]
Length = 458
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/470 (47%), Positives = 306/470 (65%), Gaps = 23/470 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ +R + F P+ G+V +Y CGIT YD CH+GHAR + FD++QRWL+ +
Sbjct: 2 SLRIYNTLTRALEDFVPLEAGRVRMYACGITVYDLCHIGHARAYVAFDLIQRWLKASGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRNITDIDDKII A +N E+++ LT R I D L I+ P ++P AT+Y+PQ
Sbjct: 62 VTFVRNITDIDDKIIRRAVENGETVRQLTDRMIAQMYLDFDALGIERPTHEPRATDYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
+L ++ L GLAY+ G DVNY+VR F YGKLSG+ + ++++
Sbjct: 122 MLDIVRTLEAKGLAYRAEGG----DVNYAVRRFPGYGKLSGK----SLDELHAGERVAVL 173
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K+DPLDF LWK +K +P + +W+S +G GRPGWHIECSAMSC LLG FD+HGGG D
Sbjct: 174 EGKEDPLDFVLWKAAKPTEPPDAQWDSDYGRGRPGWHIECSAMSCALLGETFDLHGGGAD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSEGA +W+H+GFV I+N+KMSKS GNF TIR++LKK++ E I
Sbjct: 234 LTFPHHENEIAQSEGANGKPLARFWVHNGFVNIDNEKMSKSLGNFFTIREVLKKFDAETI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAM 357
RFFI+R+HYRS +NYS+++L A+ +L RLY A+ +P HA RF AM
Sbjct: 294 RFFIVRAHYRSPLNYSDVHLEDARGALRRLYTALDAVPPAPAAIAWADP--HAARFKAAM 351
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
++DF TP A+++LF+LA +N+ +S + A L+ LG LG+L+ FL++
Sbjct: 352 DNDFATPEAVAVLFELAAEVNRGRSAERAGLLKALGGCLGILQGDPRAFLRS-------- 403
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I +I R+ A+K ++F AD+IR EL+ GI+L+D G T
Sbjct: 404 GAALDEATILQRIEARAAAKKARDFAAADRIRAELLAQGIVLKDSAAGTT 453
>gi|398948457|ref|ZP_10672810.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM33]
gi|398160688|gb|EJM48951.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM33]
Length = 460
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|447917289|ref|YP_007397857.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
gi|445201152|gb|AGE26361.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
Length = 460
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GETFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|302188937|ref|ZP_07265610.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
Length = 460
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+++KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVVEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEAAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/477 (48%), Positives = 304/477 (63%), Gaps = 28/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YN+ S KK+ F P+ PGKV +YVCG T YDYCH+GHAR MI FDI+ R +R + +D+
Sbjct: 2 LKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N+E+ ++LT R I+A +D L L + PD +P AT ++ +I
Sbjct: 62 NYVRNITDVDDKIIKRAAENDETPESLTLRMIEAQTQDELKLGNKLPDREPKATEFMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MI L+ G AYQ + G DV + YGKL+ R + + + K++
Sbjct: 122 IDMISVLVDKGFAYQGSTG----DVYFRTEKHEAYGKLNNRKLEDMLAGARIDVESAKEN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK +K E+ W S WG GRPGWHIECSAMS LG HFDIHGGG DLKFPH
Sbjct: 178 PADFVLWKSAKEG---EVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +VNYWMH G V++NN+KMSKS GNF T+RD+L+KYNPEVIRF ++
Sbjct: 235 HENEIAQSECANGTDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPEVIRFLMV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIAMNDD 360
S YRS I+YSE L AK L R+Y +++ + + D + + +R+ AM+DD
Sbjct: 295 SSQYRSPIDYSEQSLLEAKVGLERMYTSLQG------QALTDDYIASSYTERYQQAMDDD 348
Query: 361 FNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTPVAIS+LFDL +NK K+ +AK+L L LGLL + FLKN++
Sbjct: 349 FNTPVAISVLFDLVRELNKAKASAADNAPILAKELSVLAELLGLLGQDPEYFLKNSVL-- 406
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N SE +I+ I R +ARK KNF +D+IR EL GI L D G T W R
Sbjct: 407 ---NNGISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSREG-TSWTR 459
>gi|398857260|ref|ZP_10612961.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
gi|398241109|gb|EJN26768.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM79]
Length = 460
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|395495078|ref|ZP_10426657.1| cysteinyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
Length = 462
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|406940759|gb|EKD73431.1| hypothetical protein ACD_45C00321G0014 [uncultured bacterium]
Length = 460
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 316/475 (66%), Gaps = 27/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS SRKK+ F PI GKV +YVCG T YDYCH+G+AR FD + R+LR Y V
Sbjct: 2 LQIYNSLSRKKETFQPIEKGKVKIYVCGPTVYDYCHIGNARSFTAFDAIVRYLRYRGYVV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A ++ + ++ F +A ED L++ PD +P AT ++P I
Sbjct: 62 TYVRNITDIDDKIIKRANESKQEFISVVEYFTQAFCEDMQKLNLLKPDDEPKATEFVPHI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ ++EKLI N AY NGDV + VR F YG LS R I + E ++ K+D
Sbjct: 122 IALVEKLIANHYAYV----AANGDVYFDVRQFKQYGSLSHRNIDDLESGARVEISDVKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK++K +P W S WG GRPGWHIECSAMS LLG FD+HGGG+DL FPH
Sbjct: 178 PLDFVLWKMAKPGEP---SWQSPWGHGRPGWHIECSAMSMQLLGESFDMHGGGKDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A KFVNYW+H+G+++I +KMSKS GNF TIRD+LK Y+PEV+R+F+L
Sbjct: 235 HENEIAQSESATNKKFVNYWLHAGYLQIEKEKMSKSLGNFFTIRDILKDYSPEVLRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +++S+ L A+ +L R Y A++D+P + L+ + K+F+ AM+DDFN
Sbjct: 295 AGHYRSPLHFSKDLLQQAQHALERFYTALRDLPHADDL----LDTEYEKQFVTAMDDDFN 350
Query: 363 TPVAISILFDLANIINK---NKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP+A S+LF+LA+ I + +++A Q L+ LG LG+L+ ++ +FL+ R
Sbjct: 351 TPIAFSVLFELAHEIQRLRNQGDLQLAGQHAVLLKRLGGVLGILQANAMQFLQG-----R 405
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
K+N++ ++ I+ I R++AR KN++EAD+IR EL+ ++LED G T W+
Sbjct: 406 KENMDVAK--IESLIAARNQARAEKNWVEADRIRDELLAMSVVLEDGAGGTT-WK 457
>gi|395794944|ref|ZP_10474258.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
gi|395340887|gb|EJF72714.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
Length = 462
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|398867041|ref|ZP_10622511.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM78]
gi|398238158|gb|EJN23892.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM78]
Length = 460
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HSMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNLAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
Length = 462
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/477 (48%), Positives = 303/477 (63%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R FD+V R+LR + Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+ LT R I +D L+I PPD +P AT +I +I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGESIEQLTQRMIGEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++++EKLI AY +NG DV +SV + L YG LS + + ++ + K+
Sbjct: 122 IELVEKLIAREHAYVASNG----DVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTADVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L+ Y+ E +R+F+
Sbjct: 235 HHENEIAQSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLEHYDAETVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NY E LN A+ +L RLY+A+++ + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTGATPAGGEEFEARFRAAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S LFDLA +N+ K+ +A +LR LG LGLLE ++FL++
Sbjct: 352 NTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQSG----- 406
Query: 416 KKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
NVN E I+ I R +ARK KN+ +AD R L GI+LED G T WRR
Sbjct: 407 -ANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 461
>gi|398894343|ref|ZP_10646605.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM55]
gi|398182540|gb|EJM70052.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM55]
Length = 460
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 299/474 (63%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|408481226|ref|ZP_11187445.1| cysteinyl-tRNA ligase [Pseudomonas sp. R81]
Length = 462
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAQVDALIQA--RLAARTNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|398805221|ref|ZP_10564200.1| cysteinyl-tRNA synthetase [Polaromonas sp. CF318]
gi|398092002|gb|EJL82424.1| cysteinyl-tRNA synthetase [Polaromonas sp. CF318]
Length = 458
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/468 (49%), Positives = 308/468 (65%), Gaps = 19/468 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LRIYN+ SR + F P+ PG V +YVCG+T YD CH+GHAR+M+ FD+VQRW + +
Sbjct: 2 SLRIYNTLSRAVEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWFKASGLR 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A + SI+ LT I+A +D L ++PP +P AT Y+PQ
Sbjct: 62 VTYVRNITDIDDKIIKRAVERGISIRALTDEMIQAMHQDIGALGMEPPSLEPRATEYVPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN---NF 179
+L +I L GLAY+ G DVNY+VR F YGKLSG+ S + + E+ +
Sbjct: 122 MLGLIATLEDKGLAYRAPGG----DVNYAVRKFKGYGKLSGK--SLDELRAGERVAVLDG 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K +P + +W+S +G GRPGWHIECSAMSC LG FD+HGGG DL+
Sbjct: 176 KDDPLDFVLWKSAKPTEPDDAKWDSDYGPGRPGWHIECSAMSCQTLGETFDLHGGGADLQ 235
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA +W+H+GFV+++N+KMSKS GNF TIRD+L +Y+ E IRF
Sbjct: 236 FPHHENEIAQSEGASGKPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVLTRYDAETIRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F++R+HYRS +NYS+ +L+ A+ +L RLY A+ + ID +P A RF AM++
Sbjct: 296 FLVRTHYRSALNYSDAHLDDARSALKRLYTALAGVAADT--AAIDWAQPFAARFKAAMDE 353
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DF TP A+++LFDLA +NK +S +A L+ LG LGLL+ +L +
Sbjct: 354 DFGTPEAVAVLFDLAGEVNKTRSPALAGLLKSLGGCLGLLQGEPGAYL--------QAGA 405
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
E I+ I R+ A+ KNF EAD+IRQ L+ GI+L+D G T
Sbjct: 406 GLDEASIQGLIAERAAAKAAKNFAEADRIRQNLLAQGIVLKDSAAGTT 453
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/496 (47%), Positives = 302/496 (60%), Gaps = 35/496 (7%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+TL+IY+S + K+ F P+ GKV +YVCG+T YDYCH+GHAR+M+ FD+V RWLR +
Sbjct: 23 ATLKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGF 82
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DV YVRNITDIDDKIIA A +N E I LT RFI A ED+ L + PD +P AT +I
Sbjct: 83 DVNYVRNITDIDDKIIARANENGEEIGQLTERFITAMHEDAAALGCESPDAEPRATQHID 142
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFK 180
+L+MI L AY +NG DV Y+V F YGKLS R + + + K
Sbjct: 143 DMLQMIGTLEQKEHAYAASNG----DVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDK 198
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
K+P DF LWK +K +P +W+S WG GRPGWHIECSAMS LG+ FDIHGGG DL+F
Sbjct: 199 KNPFDFVLWKAAKAGEP---QWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQF 255
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A + N WMH GF+ ++ +KMSKS GNF TIR++++K++PE IRFF
Sbjct: 256 PHHENEIAQSEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREVMEKFHPETIRFF 315
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK------DIP-------KINYKKIIDLNE 347
IL SHYRS +N+S+ L A L R+Y A+K D P I+ I
Sbjct: 316 ILSSHYRSQVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTASIDSEIR 375
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINK-----------NKSIKMAKQLRGLGNWL 396
++ FI AMNDDFNTP AIS+LF LA +NK K A L+GL L
Sbjct: 376 GYSANFIKAMNDDFNTPQAISVLFSLAKEVNKLARETENDQATAKLKAAAVTLKGLAGTL 435
Query: 397 GLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNG 456
+ + EFL+ +I + ++ + ++ I I R +A+ KNF AD+IR L N
Sbjct: 436 NIGQVKPTEFLQAHIGSVDEEQM--TDEQIDTLIQERIDAKANKNFARADEIRNLLQQNN 493
Query: 457 IILEDMPNGKTEWRRI 472
I LED G T WRRI
Sbjct: 494 IELEDSKQGTT-WRRI 508
>gi|311107717|ref|YP_003980570.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
gi|310762406|gb|ADP17855.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
Length = 484
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/490 (46%), Positives = 306/490 (62%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L ++ PD +P AT Y+ +
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEFYIDAMHADERALGVETPDREPRATEYVGDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL NGLAYQ ++G DVN++VR F YGKLSG+ + + E+ + K
Sbjct: 122 LDIIGKLEQNGLAYQADDG----DVNFAVRGFAGYGKLSGKTLDDL--RAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP------ 294
PHHENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR + + P
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQEEPAADQAV 295
Query: 295 --------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
E++RFFI+R+HYRS NY+ L A+ +L RLY A++++P + ID N
Sbjct: 296 YRVNPREAEMVRFFIVRNHYRSPQNYTPDNLIDAQNALDRLYQALQNVPA--DAQGIDWN 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ AI+ LF+LA+ N+ KS + A QL+ L + LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAIAALFELASEANRGKSARSAGQLKALASLLGLLQQDPAAY 413
Query: 407 LK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ + E+ + I+ I R+ A+ +NF EAD+IR EL GI L+D
Sbjct: 414 FQSPTRYSAAAIEQGERRALDAEAIQSLIDARAAAKAARNFAEADRIRAELREAGIELDD 473
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 474 KPGGLTQWRR 483
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 309/475 (65%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GADQSAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWPAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 304/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +IP+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++KLI G AY +NG DV + VR F YGKLS + L + K+
Sbjct: 122 IELVQKLIERGFAYVADNG----DVMFEVRKFDEYGKLSKQDLDQLQAGARVDVETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|237803609|ref|ZP_04591194.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025591|gb|EGI05647.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 460
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES TLT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDTLTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A++ +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALRGLPVAAPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVPAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 311/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVVFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++ INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMVREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/483 (47%), Positives = 312/483 (64%), Gaps = 41/483 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
++++EKLI G AY +NG DV + V +F YGKLS + N++ E N
Sbjct: 122 IEIVEKLIARGHAYVADNG----DVMFDVESFKEYGKLS----RQDLNQLQAGARIEINE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL
Sbjct: 174 IKKNPMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R
Sbjct: 231 MFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L +HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+
Sbjct: 291 YFLLTAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVAFGGENFVEAFREAMD 347
Query: 359 DDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+S+LF++A INK K+ +A +LR L LGLL+ ++FL+
Sbjct: 348 DDFNTPNALSVLFEMAREINKLKTEEAEKANGLAARLRELAGILGLLQQDPEKFLQAG-- 405
Query: 413 TERKKNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
S++D I+ I R+EAR K++ AD R EL GI+LED NG T
Sbjct: 406 ---------SDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGANGTT- 455
Query: 469 WRR 471
WR+
Sbjct: 456 WRK 458
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 38/493 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IYN+ RKK+ F P+ PGKV +YVCG+T YDY H+GHAR+M+VFD++ R LR+ +D+
Sbjct: 10 ITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGFDL 69
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN TDIDDKII A + ESI+TLT R+I A +D L +QP D +P AT ++P++
Sbjct: 70 TYVRNFTDIDDKIIKRANERGESIQTLTQRYIDAFHQDMAALGVQPADIEPKATEHLPEM 129
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
++MI L+ G+AY + GDV Y+V F NYG+LSG+++ E ++ K++
Sbjct: 130 MQMIGTLMDKGVAYAS-----GGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSNKQN 184
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E +W+S WGAGRPGWHIECSAM LG+ FDIHGGG+DL FPH
Sbjct: 185 PMDFVLWKGAK---PEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPH 241
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINN-----KKMSKSFGNFCTIRDLLKKYNPEVI 297
HENEIAQ+EG VNYW+H+GFV + N +KMSKS GNF TIRDLL Y EV+
Sbjct: 242 HENEIAQTEGCTGQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLALYPGEVL 301
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKD-------IPKINYKKIIDL--NEP 348
RFFIL SHYRS +++S L AK L R+Y A++ +P + D+ P
Sbjct: 302 RFFILNSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGEPADVPAGAP 361
Query: 349 H--AKRFIIAMNDDFNTPVAISILFDLANIIN------KNKSI--KMAKQLRGLGNWLGL 398
+ ++ AM+DDFNTP AI+ LF+ A ++N K+ ++ A+ +RGLG+ LGL
Sbjct: 362 QDLVENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPAVIATWARLIRGLGHHLGL 421
Query: 399 LEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ + ++ I E+ I+ I RS AR KN+ E+D+IR L GI+
Sbjct: 422 AGQDPELWFRSGIGAEQ----GLQAEAIEALIAERSAARAAKNWAESDRIRDTLAQQGIV 477
Query: 459 LEDMPNGKTEWRR 471
LED +G T+W R
Sbjct: 478 LEDGQHG-TQWSR 489
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/477 (46%), Positives = 296/477 (62%), Gaps = 25/477 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ ++ K+ F P+ V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR
Sbjct: 1 MMALSIYNTLTKTKEAFRPLQGNNVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E + L R I A ED L + PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRAGENGEPFQALVERMIAAMHEDETRLDVLRPDIEPRATDHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
+ +MI+ LI G AY NG DV Y V F+ YGKLS R I E +
Sbjct: 121 AGMHQMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W+S WGAGRPGWHIECS MS LG FDIHGGG DL
Sbjct: 177 KQDPLDFVLWKGAKPGEP---SWSSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+
Sbjct: 234 FPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
++ SHYRS INYSE L AK +L R Y +K +P + + RF AM+D
Sbjct: 294 LLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPNVAPAG----GDEFVARFATAMDD 349
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFN+P A ++LFD+ +N+ + ++A +L+ L + LG+L+ + FL+
Sbjct: 350 DFNSPEACAVLFDMIREVNRLRESDPTAAAQLAARLKELASVLGVLQLEPEAFLQAGA-- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 408 --AGKVDAAE--VEALIAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 459
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 311/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGSRIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|257483826|ref|ZP_05637867.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289625911|ref|ZP_06458865.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651301|ref|ZP_06482644.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422583557|ref|ZP_16658680.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|422595324|ref|ZP_16669612.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422606355|ref|ZP_16678365.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
gi|330868387|gb|EGH03096.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330890007|gb|EGH22668.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
gi|330985629|gb|EGH83732.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 460
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|213968819|ref|ZP_03396960.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
gi|213926422|gb|EEB59976.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
Length = 466
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD
Sbjct: 7 VLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD 66
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP
Sbjct: 67 LTYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPG 126
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F YGKLS + I E + K+
Sbjct: 127 MHAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQ 182
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FP
Sbjct: 183 DPLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N W+H G ++IN +KMSKS NF T+RD+L+KY+PEV+R+ +
Sbjct: 240 HHENEIAQSEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLEKYHPEVVRYLL 299
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 300 VSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAG----GEAFVERFTTAMNDDF 355
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+
Sbjct: 356 GTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA---- 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 412 QGRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 463
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 308/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|298159261|gb|EFI00319.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 460
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVARWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/473 (49%), Positives = 315/473 (66%), Gaps = 24/473 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++NS S+KK+IF I PG+V +YVCG+T YD+CHLGHAR++IVFD++ RW + + Y+V
Sbjct: 2 IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A + + LT +FI D+ L + PD +P AT I +
Sbjct: 62 TYVRNITDIDDKIITRAAEQGVTYGVLTKQFIDEMNADAEALGVISPDAEPKATESIDAM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ MI+ LI G AY +N DV Y+V F YGKLSG+ + N++ E + FKK
Sbjct: 122 IIMIQGLIEKGYAYVGSNN----DVFYAVSKFNGYGKLSGKSLEDLRAGNRV-EVDKFKK 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+ DF LWK +K P E WNS WG GRPGWHIECSAMS LG +FDIHGGGQDL+FP
Sbjct: 177 NSFDFVLWKSAK---PGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + NYW+H+GFVK++N+KMSKS GNF TIR++L Y PE++RFF+
Sbjct: 234 HHENEIAQSEAFNGCQMANYWLHNGFVKVDNEKMSKSLGNFFTIREILNHYEPEIVRFFV 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIK-DIPKINYKKIIDLNEPHAKRFIIAMNDD 360
L++ YRS +NYS+ +L AK+ L RLYLAI+ + +I+ + ID A +F A++DD
Sbjct: 294 LKAQYRSPLNYSDTHLEDAKQGLTRLYLAIRGNDTRIDQE--IDWKNNFASQFKDALDDD 351
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVN 420
FNT AISILF LAN +NK+ + + L L N LG+LE + FL+ NI +
Sbjct: 352 FNTSEAISILFSLANEVNKSNQDQEKQLLIQLANILGILEMDPELFLRGNIKS------- 404
Query: 421 YSENDIKLKIYF--RSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+NDI + + R A+K K++ +AD+IR L + I+LED PNG T WR+
Sbjct: 405 -SDNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPNG-TIWRK 455
>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
Length = 462
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E+ LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGEAFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/483 (46%), Positives = 300/483 (62%), Gaps = 23/483 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L++Y++ S K+ F PI G++ +YVCG+T YDYCH+GHAR+M+ FD++ RWLR Y
Sbjct: 9 SQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGY 68
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
V YVRNITDIDDKII A N E+I LT RFI A +D L Q P+ +P AT +I
Sbjct: 69 QVNYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIE 128
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKK 181
+ +I+ L+ LAYQ + G DV Y++ F NYGKLS R + +E+ + +
Sbjct: 129 NMQHLIDVLLTKNLAYQGSGG----DVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAE 184
Query: 182 D---PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
D P DF LWK +K ++P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 185 DKRHPFDFVLWKTAKPSEPH---WQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDL 241
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA + N+WMH GF+ I+ +KMSKS GNF TIR+++ K++PE IR
Sbjct: 242 QFPHHENEIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMDKFHPETIR 301
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIA 356
FF+L SHYRS +N+S+ L + +L R+Y ++K I+ + F A
Sbjct: 302 FFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWESEAGQAFAKA 361
Query: 357 MNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
MNDDFNTP A+S+LF + IN+ K+ + A L+ L + L + + S EFL+
Sbjct: 362 MNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIAQSSPHEFLQA 421
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
NI K S+ +I KI R +A+ +KNF +AD IR EL GI LED G T W
Sbjct: 422 NI---GNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTT-W 477
Query: 470 RRI 472
RRI
Sbjct: 478 RRI 480
>gi|28870897|ref|NP_793516.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301384135|ref|ZP_07232553.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
gi|302059502|ref|ZP_07251043.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
gi|302134322|ref|ZP_07260312.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422659710|ref|ZP_16722133.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|37999386|sp|Q87YQ2.1|SYC_PSESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28854146|gb|AAO57211.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331018326|gb|EGH98382.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 460
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF T+RD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAG----GEAFVERFTTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----Q 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|395649608|ref|ZP_10437458.1| cysteinyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 462
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDATEVDALIQA--RLAARVNKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|332283464|ref|YP_004415375.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330427417|gb|AEC18751.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 483
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/490 (46%), Positives = 313/490 (63%), Gaps = 29/490 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ + PG V +YVCG+T YD+CHLGHAR+++ FDIVQRWLR + Y V
Sbjct: 2 LHIYNTLSRAKEPLKTVEPGLVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N + + +TS FI A D L + PD++P AT ++ ++
Sbjct: 62 KYVRNITDIDDKIIRRAVQNGQRMSEVTSFFIDAMHADERALGVASPDFEPRATEHVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I+ L NGLAYQ++ +GDVNY+VR+F YGKLSG+ S + + E+ ++ K
Sbjct: 122 LGIIKCLEQNGLAYQSD----DGDVNYAVRDFPGYGKLSGK--SLDDLRAGERVAVSSGK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K+++P E +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKAAKSDEPDESKWPSNYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK---------- 290
PHHENEIAQSEGA+ + WMH G + +++ KMSKS GNF TIR +
Sbjct: 236 PHHENEIAQSEGAFGGTLASVWMHCGPLMVDSDKMSKSLGNFRTIRATISIDANLPADQA 295
Query: 291 --KYNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL 345
NP E++RFFI+R+HYRS NY+ L A+ +L RLY + ++P + ID
Sbjct: 296 SYSANPREAEMLRFFIVRNHYRSQQNYAPDNLFDAQNALDRLYQTLHNVPAEPVQ--IDW 353
Query: 346 NEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
N P A+ F AM+DDFNT A++ LF+L++ N+N S + + +R LG LGLL+
Sbjct: 354 NHPAAQAFRAAMDDDFNTSGAVAALFELSSEANRNGSGRSSGLMRALGGILGLLQSDPAT 413
Query: 406 FLKNNIYTE---RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDM 462
+L++ + ++ I+ I R+ A++ +NF +AD+IR+ L GI LED
Sbjct: 414 YLQSPTRYQPGSGSAQAVFASEQIEALIKDRALAKQERNFAQADQIRKTLQEGGIELEDK 473
Query: 463 PNGKTEWRRI 472
G T+WRR+
Sbjct: 474 AGGVTQWRRV 483
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/476 (48%), Positives = 304/476 (63%), Gaps = 32/476 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L+IYN+ SR+K+ F P+ PGK+ +YVCG+T YD+CH+GHAR+M+ FD++ R+LR +D
Sbjct: 2 ALQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGFD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V Y+RNITDIDDKII A +N E + L R + A ED L+I P+ +P AT +I
Sbjct: 62 VNYIRNITDIDDKIIQRAAENGEPFEQLVDRMVDAMNEDFAKLNILTPNSEPRATQHIDG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNN 178
I+KM+E LI G AY NG DV Y VR F YGKLSG+++ S + E+
Sbjct: 122 IIKMVETLIEKGFAYAAKNG----DVYYRVRKFDGYGKLSGKILEELESGARIAVEEE-- 175
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K P E W+S WG GRPGWHIECS MS LG++FDIHGGG DL
Sbjct: 176 -KEDPLDFVLWKSAK---PEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDL 231
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
KFPHHENEIAQSE A + N WMH+G ++I+ +KMSKS GNF TIRD+L+KY+ EVIR
Sbjct: 232 KFPHHENEIAQSEAATGEHYANTWMHAGALRIDGEKMSKSLGNFFTIRDILEKYDAEVIR 291
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAK----RFI 354
FF+ YRS INYSE L A+ L RLY AI + +ID + + RF
Sbjct: 292 FFLSSVQYRSAINYSEDGLKDAEAKLDRLYNAIH---GCDLSAVIDEQDAVVQDTRERFE 348
Query: 355 IAMNDDFNTPVAISILFDLANIINKNKSIK---MAKQLRGLGNWLGLLEYSSDEFLKNNI 411
AM+DDFNTP AI++LFDL N INK + + +A L L + LG L+ D +L
Sbjct: 349 AAMDDDFNTPKAIAVLFDLVNEINKKEGAEKNPLAALLVELSSILGCLQSDPDNYL---- 404
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
++ V + I+ KI R++A+K K+F ADKIR++L GIIL+D G T
Sbjct: 405 ----QRGVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQGIILQDSREGTT 456
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 309/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 20 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 79
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 80 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 139
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 140 IEIVEKLIARGHAYVADNG----DVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKN 195
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 196 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 252
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 253 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 312
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 313 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVAFGGENFVDAFREAMDDDFN 369
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR L LGLL+ ++FL+
Sbjct: 370 TPNALSVLFEMAREINKLKTEYAEKANGLAARLRELAGVLGLLQQDPEKFLQAG------ 423
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 424 -----SDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGSNGTT-WRK 476
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 309/475 (65%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F +M+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVETFRESMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDIEKANGLAARLRELGAILGLLQQEPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARVAKDWSAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|440737636|ref|ZP_20917198.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
gi|440381844|gb|ELQ18359.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
Length = 460
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIAAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + + RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAG----GDTFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRETDLDAAAGLAARLKELASVLGVLQMEADNFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/483 (46%), Positives = 300/483 (62%), Gaps = 23/483 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L++Y++ S K+ F PI G++ +YVCG+T YDYCH+GHAR+M+ FD++ RWLR Y
Sbjct: 9 SQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGY 68
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
V YVRNITDIDDKII A N E+I LT RFI A +D L Q P+ +P AT +I
Sbjct: 69 QVNYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIE 128
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKK 181
+ +I+ L+ LAYQ + G DV Y++ F NYGKLS R + +E+ + +
Sbjct: 129 NMQHLIDVLLTKNLAYQGSGG----DVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAE 184
Query: 182 D---PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
D P DF LWK +K ++P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 185 DKRHPFDFVLWKTAKPSEPH---WQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDL 241
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA + N+WMH GF+ I+ +KMSKS GNF TIR+++ K++PE IR
Sbjct: 242 QFPHHENEIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVDKFHPETIR 301
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIA 356
FF+L SHYRS +N+S+ L + +L R+Y ++K I+ + F A
Sbjct: 302 FFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWESEAGQAFAKA 361
Query: 357 MNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
MNDDFNTP A+S+LF + IN+ K+ + A L+ L + L + + S EFL+
Sbjct: 362 MNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIAQSSPHEFLQA 421
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
NI K S+ +I KI R +A+ +KNF +AD IR EL GI LED G T W
Sbjct: 422 NI---GNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELEDGRMGTT-W 477
Query: 470 RRI 472
RRI
Sbjct: 478 RRI 480
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 311/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTVQ---SAVAFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL++
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R++AR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNDARAAKDWSAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 305/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 5 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 64
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +I +I
Sbjct: 65 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 124
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 125 IELVEKLIERGFAYVADNG----DVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 180
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 181 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 238 HENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 297
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 298 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 348
Query: 357 MNDDFNTPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N K +S++ A +L R L + +G+L + FLK N
Sbjct: 349 MNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGN 408
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 409 AGNDDEVA------EIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WR 461
Query: 471 R 471
R
Sbjct: 462 R 462
>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|259511840|sp|C3JYD3.1|SYC_PSEFS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 462
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ ++FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMKPEDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD++ RWLR YD
Sbjct: 2 ALSIYNTLTKSKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVITRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDEARLNVLRPDLEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+
Sbjct: 122 MHAMIQTLIGKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAQAAG----GEAFVERFGAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + + +A +L+ L LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDVPAAAGLAARLKQLAGVLGVLQLEPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIAARLTARVEKNWAESDRIRDQLAAMGVVLEDGKGGTT-WR 458
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F P+ PGKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPLVPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVTRYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES LT R D L+I PD +P AT +IP+I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDALTERLTAEMYRDFDALNIARPDIEPKATGHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M++ LI +G AY +NG DV + V +F +YG+LSG+ L E K++
Sbjct: 122 IAMVDTLIKDGHAYVADNG----DVLFEVNSFADYGRLSGQNLEQLQAGARVEVEQSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKQSK---PGEPSWDSPWGPGRPGWHIECSAMNGKHLGKHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VN WMHSG V ++ +KMSKS GNF TIRD+LK Y+ E IR+F+L
Sbjct: 235 HENEIAQSCCANHSPYVNTWMHSGMVMVDQEKMSKSLGNFFTIRDVLKHYDGETIRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L A+ +L RLY A++D+P++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSDENLKQARTALERLYTALRDLPEVAAAG----GEDFVARFTAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA IN+ K + + +LR L LGLL + FL+ +
Sbjct: 351 TPEAYSVLFDLAREINRQKGKDDAAAAGLGGRLRELAGVLGLLTQEPEAFLRGD------ 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ DI+ I R +AR+ K++ AD R +L GI+LED P G T WRR
Sbjct: 405 AGADDEVADIERLIQARLDARQNKDWAAADAARDQLTAMGIVLEDGPEG-TRWRR 458
>gi|385787638|ref|YP_005818747.1| cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 462
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/477 (48%), Positives = 305/477 (63%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R FD+V R+LR + Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYHL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+ LT+R I +D L+I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHQDFAALNILPPDLEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++++EKLI AY +NG DV +SV + YG LS + + ++ + K+
Sbjct: 122 IELVEKLITREHAYVASNG----DVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F+
Sbjct: 235 HHENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NY E LN A+ +L RLY+A+++ + + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTRATPAGGEEFEARFREAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S LFDLA +N+ K + +A +LR LG LGLLE ++FL++ +
Sbjct: 352 NTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPEQFLQSGV---- 407
Query: 416 KKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N+N E I+ I R +ARK KN+ +AD R L GI+LED G T WRR
Sbjct: 408 --NINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 461
>gi|399009242|ref|ZP_10711683.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM17]
gi|398113137|gb|EJM02987.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM17]
Length = 460
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V FL YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFLGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVPAAG----GEAFVERFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +LR L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLRELADVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARANKDWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 305/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N K +S++ A +L R L + +G+L + FLK N
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGN 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 314/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N ESI+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAADLGCVAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMISTLVNKGAAYPASNG----DVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K ++ +K +D L + +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L N LGL++++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQAMVLYSTLRQLTNILGLVQHNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ DI+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DI---GQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|422640394|ref|ZP_16703821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
gi|330952785|gb|EGH53045.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
Length = 460
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIGAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPLAEPAG----GEAFVERFSAAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
VN +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVNAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 305/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N K +S++ A +L R L + +G+L + FLK N
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGN 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|388467470|ref|ZP_10141680.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
gi|388011050|gb|EIK72237.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
Length = 460
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YDYCH+GH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTERMIAAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGTK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPCVAPAG----GEAFVARFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLAARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|440721391|ref|ZP_20901790.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440724438|ref|ZP_20904720.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34881]
gi|443644740|ref|ZP_21128590.1| Cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B64]
gi|440363812|gb|ELQ00971.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440370082|gb|ELQ07028.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP34881]
gi|443284757|gb|ELS43762.1| Cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B64]
Length = 460
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 298/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I+A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 314/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N ESI+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMISTLVNKGAAYPASNG----DVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K ++ +K +D L + +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L N LGL++++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ DI+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DI---GQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 309/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 25 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 84
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 85 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 144
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY NNG DV + V +F YGKLS + L E N KK+
Sbjct: 145 IEIVEKLIARGHAYVANNG----DVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKN 200
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 201 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 257
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS NF TIRD+L YN E +R+F+L
Sbjct: 258 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLNHYNAEAVRYFLL 317
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 318 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVAFGGENFVEAFREAMDDDFN 374
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +L L LGLL+ ++FL+
Sbjct: 375 TPNALSVLFEMAREINKLKTEDAEKANGLAARLCELAGILGLLQQDPEKFLQAG------ 428
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 429 -----SDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGPNGTT-WRK 481
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 315/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N ESI+ LT+RFI+A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGESIQQLTARFIEAMNEDAANLGCAAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMISNLVDKGAAYPASNG----DVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K + +K +D L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQTYGQKTVDALDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L N LGL+++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LTLSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/483 (48%), Positives = 315/483 (65%), Gaps = 24/483 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRVDGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII+ A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIISRANENGETIQQLTARFITAMNEDAASLGCAEPDESPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ NG AY ++NG DV Y V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGTLVENGTAYPSSNG----DVYYEVTKFAKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKANEP---SWQSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKI--IDLNEPHAKRFII 355
R+FI+ SHYRS +N+S+ L AK +L R Y A K + Y +I L+ +RF
Sbjct: 294 RYFIVSSHYRSPVNFSDTALKEAKTALTRFYHAFKAYEQ-TYGQIHSDQLDHEFIERFNS 352
Query: 356 AMNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLK 408
AM DDFNTP A+++LFDL +N+ + A+Q LR L LGL++++ DEFLK
Sbjct: 353 AMRDDFNTPEAMAVLFDLNRELNRAVKEQCAEQAALYYATLRHLTTILGLVQHNVDEFLK 412
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
++I ++ ++ ++++I+ I R +A+K K+F +AD IRQ L+ G+ LED G T
Sbjct: 413 SDI---GQQALSLNDDEIEALIQQRHDAKKAKDFAKADGIRQSLLEKGVALEDTRQG-TV 468
Query: 469 WRR 471
WRR
Sbjct: 469 WRR 471
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/477 (46%), Positives = 306/477 (64%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ +++S S ++Q + P V LYVCG+TAYDYCHLGHAR+MIVFD+ R+LR + V
Sbjct: 2 IELHDSLSGQRQPLKTLEPDHVRLYVCGVTAYDYCHLGHARVMIVFDMFVRYLRAIGWRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TDIDDKII A + E+ + +++RF +A +ED L ++ P +P AT ++ QI
Sbjct: 62 TYVRNVTDIDDKIINRANETGETPEAISTRFTEAMREDEAALGLKAPSAEPTATGHVDQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ MIE+LI NG AY ++NG DV Y V F NYG LSGR ++ + E+ N K
Sbjct: 122 IAMIERLIENGAAYASDNG----DVYYDVSTFDNYGALSGRRLADL--RAGERIAVNEAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK +K ++P W+S WG GRPGWHIECSAMS + LG+ FDIHGGG DL+F
Sbjct: 176 TDPLDFVLWKAAKPDEP---SWDSPWGQGRPGWHIECSAMSTHCLGASFDIHGGGLDLQF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A ++V WMH+GFV ++++KMSKS GNF TIRD+L KY+ E +R+F
Sbjct: 233 PHHENEIAQSEAATGQRYVTTWMHNGFVTVDDEKMSKSLGNFLTIRDVLAKYDAESVRYF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
+L +HYRS + Y+ ++ A +L RLY A++D+ + + + + + RF AM DD
Sbjct: 293 VLSTHYRSPLAYNVDAMDAATSALSRLYTALRDVAPNDAQS--EAADAYEARFTDAMADD 350
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
NTP AI++LF++A + K +A +L L +GLLE S FL+ + E
Sbjct: 351 LNTPAAIAVLFEMARDCQRLKQDDCQAAGAIAARLALLAGRIGLLEQSPQVFLQGHAGEE 410
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S + I+ + R +AR KNF AD+IR L I+LED P+G T WRR
Sbjct: 411 -----GLSADTIEAMLQERRDARAAKNFARADEIRDALTAQNIVLEDGPDG-TLWRR 461
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 309/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIETLIKQRNEARAAKDWSAADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|398991765|ref|ZP_10694862.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM24]
gi|399013066|ref|ZP_10715381.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM16]
gi|398114590|gb|EJM04402.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM16]
gi|398137266|gb|EJM26329.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM24]
Length = 460
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPTVAPAG----GEAFVERFTAVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|398962580|ref|ZP_10679287.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM30]
gi|398150792|gb|EJM39368.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM30]
Length = 460
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGFAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTTVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 310/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAQYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVAFGGENFVEAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWSAADAARNELTVMGIVLEDGPNGTT-WRK 458
>gi|424922540|ref|ZP_18345901.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens R124]
gi|404303700|gb|EJZ57662.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens R124]
Length = 460
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTTVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRDSDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|416015368|ref|ZP_11562981.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416028228|ref|ZP_11571284.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422407213|ref|ZP_16484217.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320325346|gb|EFW81413.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320327670|gb|EFW83678.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330882429|gb|EGH16578.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 460
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRIYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|440746746|ref|ZP_20926026.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP39023]
gi|440371006|gb|ELQ07871.1| cysteinyl-tRNA ligase [Pseudomonas syringae BRIP39023]
Length = 460
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIGAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPLAEPAG----GEAFVERFSAAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
VN +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVNAAE--VEALIQARLAARAAKDWAESDRIRDQITVMGVLLEDGKGGTT-WR 457
>gi|255021318|ref|ZP_05293366.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340782171|ref|YP_004748778.1| cysteinyl-tRNA synthetase [Acidithiobacillus caldus SM-1]
gi|254969181|gb|EET26695.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
gi|340556324|gb|AEK58078.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus SM-1]
Length = 471
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 307/477 (64%), Gaps = 24/477 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ + I++S +K + PGKV +YVCG+T YD+CHLGHAR+M+ FD V R+LR
Sbjct: 5 LPPIHIHDSMEGRKLPLSLVQPGKVGIYVCGMTVYDFCHLGHARVMVTFDTVVRYLRARG 64
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+VTYVRNITDIDDKII A + E + +LT RFI A ED + L P +P AT ++
Sbjct: 65 LEVTYVRNITDIDDKIIRRAAERGEGLDSLTQRFIDAMHEDEVALGCIAPTVEPRATQHV 124
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNF 179
Q+L++IE L+ G AY NGDV Y+VR+F YG+LSGR + + E
Sbjct: 125 GQMLELIETLVRRGHAYAPG----NGDVYYAVRSFPAYGRLSGRSLEELHSGARVEPGED 180
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W+S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 181 KRDPLDFALWKAAKPGEPA---WDSPWGPGRPGWHIECSAMSQETLGCRFDIHGGGADLL 237
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS+GA F +WMH+GFV+I+ +KMSKS GNF +RDLL Y EV+RF
Sbjct: 238 FPHHENEIAQSQGA-GCAFAQHWMHNGFVRIDEEKMSKSLGNFRLVRDLLPIYGGEVLRF 296
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +N+SE L A+ L RLY A++++P + + + + RF AM D
Sbjct: 297 FILNSHYRSPLNFSEKLLEQARSGLTRLYTALRELPDDDGSILPE--DSWGPRFHSAMAD 354
Query: 360 DFNTPVAISILFDLANIINKNKS-----IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
DF+TP A+++LFDLA IN+ + +A++LR LG LG+L+ ++FL+ +
Sbjct: 355 DFHTPEALAVLFDLAREINRRRDAGEPFAALARRLRELGAVLGILQRRPEDFLRGDAA-- 412
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V++ E I + + AR+ +NF EAD++R+EL GI+LED P G T WR+
Sbjct: 413 -GIDVDWIEGRIAAR----AAARRERNFAEADRLRKELEECGILLEDGPGGTT-WRQ 463
>gi|422617423|ref|ZP_16686126.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330897806|gb|EGH29225.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 460
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 307/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG +FDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARTAKDWSAADSARNELTAMGIVLEDGPNGTT-WRK 458
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/482 (48%), Positives = 315/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N ESI+ LT+RFI+A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGESIQQLTARFIQAMNEDAANLGCAEPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY NGDV + V F NYG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGTLVDKGAAYP----AANGDVYFEVSKFNNYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K ++ +K ++ L + +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVETLEQGFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L N LGL+++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATMLYSTLRHLTNILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E K S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEALK---LSDTEIENFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V YVRNITDIDDKII A +N ESI LT RFI+A ED+ L PD P AT+YI
Sbjct: 61 WSVKYVRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY + NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQSMIGNLVEKGTAYPS----ANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K+N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKDNEP---AWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD++ K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K + +D L+E +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETLLERFNSA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT AI++LF++ +N+ + A+Q LR L N LGL++++ +EFLK+
Sbjct: 354 MRDDFNTAEAIAVLFEVNKELNRAVKEQQAEQAAIYYATLRHLTNILGLVQHNVEEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE I+ I R +A+K K F +AD+IRQ L++ G++LED G T W
Sbjct: 414 DIGQE---ALALSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|424071451|ref|ZP_17808876.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407998831|gb|EKG39229.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 460
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSAAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|402699104|ref|ZP_10847083.1| cysteinyl-tRNA ligase [Pseudomonas fragi A22]
Length = 460
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E+ + LT+R I A ED L+I+ PD +P AT+YIP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEAFEVLTARMIAAMHEDEARLNIRKPDMEPRATDYIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS+INYSE L AK +L R Y A+K +PK+ E +RF MNDDF
Sbjct: 295 SSHYRSSINYSEDNLKDAKAALERFYHALKGLPKVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRDTDLQAAAGLAARLKELADVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ + D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAVQVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 304/475 (64%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ K E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDLKAAPAGGEEYVSRFTNAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N K +S++ A +L R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WRR 459
>gi|378823955|ref|ZP_09846523.1| cysteine--tRNA ligase [Sutterella parvirubra YIT 11816]
gi|378597236|gb|EHY30556.1| cysteine--tRNA ligase [Sutterella parvirubra YIT 11816]
Length = 468
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/484 (47%), Positives = 301/484 (62%), Gaps = 31/484 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IY++ +R+++ F PI PG V +YVCG+T YDYCH+GH R + FD+V+RWL +
Sbjct: 2 ALSIYSTLAREQRPFEPIEPGHVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGNK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRNITD+DDKII A + + LT+ F +A QED L L P ++P AT+YIPQ
Sbjct: 62 VTFVRNITDVDDKIIRRAAERGVTTDALTAEFARAMQEDMLALGCLAPTHEPRATDYIPQ 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+L ++ L G AYQ +GDV+Y+VR F YGKLSG+ I + K+
Sbjct: 122 MLNLVGLLEQKGFAYQGE----DGDVDYAVRKFDTYGKLSGKSIDDLQSGARVAVSQGKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E +W+SKWG GRPGWHIECSAM+ LLG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKKAK---PGEPQWDSKWGKGRPGWHIECSAMARELLGDTFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINN-----KKMSKSFGNFCTIRDLL------- 289
HHENEIAQSE A F WMHSG +++ N +KMSKS GNF TIRD L
Sbjct: 235 HHENEIAQSEAATGVPFAKTWMHSGPLRVRNADGTEEKMSKSLGNFWTIRDALADTEKAY 294
Query: 290 -KKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
K EV+RFF+L+SHYRS +++ + ++K L+RLY A+K + + K +D NE
Sbjct: 295 GKGNGAEVLRFFLLKSHYRSPVSFGPGLIEDSQKGLVRLYTALKG--RTSDGKDLDWNEA 352
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
A RF AM+DDFNTP A+S+LF+LA IN+ + +QL GLG L LL+ ++ FLK
Sbjct: 353 FAARFKAAMDDDFNTPQAVSVLFELAAEINRTGDAALVRQLLGLGKILNLLQGDAETFLK 412
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ + V I R+ A+K ++F AD+IR +L+ GI L D P G T
Sbjct: 413 GGVNEDEAARVEG-------LIAERAAAKKARDFARADQIRADLLAEGIELMDGPQGTT- 464
Query: 469 WRRI 472
WRRI
Sbjct: 465 WRRI 468
>gi|71736729|ref|YP_273919.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|109894921|sp|Q48L06.1|SYC_PSE14 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71557282|gb|AAZ36493.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 460
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|66044980|ref|YP_234821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
gi|75502675|sp|Q4ZVN9.1|SYC_PSEU2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|63255687|gb|AAY36783.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
Length = 460
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I+A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR + G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGKGGTT-WR 457
>gi|389681485|ref|ZP_10172830.1| cysteine--tRNA ligase [Pseudomonas chlororaphis O6]
gi|388555021|gb|EIM18269.1| cysteine--tRNA ligase [Pseudomonas chlororaphis O6]
Length = 460
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMITAMHEDEARLNIKKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAG----GEAFVERFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +LR L + LG+L+ +D+FL+
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLRELADVLGVLQLEADDFLQAGA----A 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VESLIQARLAARANKDWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 310/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR +YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLDYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLEDGANGTT-WRK 458
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 316/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N ESI+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGESIQQLTARFIDAMNEDAANLGCAAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY ++NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQSMINTLVDKGAAYPSSNG----DVYFEVSKFDKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K ++ +K I+ L + +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTIETLEQNFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L + LGL+++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATALYSTLRHLTHILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E ++ S+ DI+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LSLSDADIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|422645826|ref|ZP_16708961.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959375|gb|EGH59635.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 460
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSAAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVRDINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|443470479|ref|ZP_21060579.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|443473065|ref|ZP_21063090.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442900156|gb|ELS26408.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442903628|gb|ELS28919.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 462
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/477 (46%), Positives = 289/477 (60%), Gaps = 25/477 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ ++ K+ F P+ V +YVCG+T YDYCH+GHAR+M+ FD+V RWLR
Sbjct: 1 MMALSIYNTLTKAKEAFQPLEGNSVRMYVCGMTVYDYCHIGHARVMVAFDVVTRWLRERG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A++N E + L R I A ED L + PD +P AT +I
Sbjct: 61 YDVTYVRNITDIDDKIIRRAQENGEPFEVLVDRMIAAMHEDEARLSVLRPDIEPRATGHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
+ +MI+ LI G AY NG DV Y V F YGKLS R I E +
Sbjct: 121 AGMHEMIQTLIDKGFAYAPGNG----DVYYRVGRFEGYGKLSRRRIDELKIGARIEVDES 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL
Sbjct: 177 KEDPLDFVLWKGAKPGEP---SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A + WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+
Sbjct: 234 FPHHENEIAQSEAATGKLYAKAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
++ SHYRS INYSE L AK +L R Y +K +P + E RF AM+D
Sbjct: 294 LLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPAVAPAG----GEAFVARFGAAMDD 349
Query: 360 DFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFN+P A ++LF++ +N+ + + +A QL+ + LG+L+ D FL+
Sbjct: 350 DFNSPEACAVLFEMIREVNRLREVDVQVAAGLAAQLKSMAAVLGVLQLEPDAFLQAGA-- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR KN+ E+D+IR L G++LED G T WR
Sbjct: 408 --AGKVDAAEVDALIQA--RLAARAEKNWAESDRIRDRLTAMGVVLEDGKGGTT-WR 459
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 301/475 (63%), Gaps = 21/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ + K +F PI PGK+ +YVCG+T YDYCH+GHAR+M+ FD++ R+LR +DV
Sbjct: 2 LHIYNTLTNSKTVFTPIEPGKIRMYVCGVTVYDYCHIGHARVMVSFDLITRYLRARGWDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N+E + LT R I A ED L + PD +P AT ++ I
Sbjct: 62 DYVRNITDVDDKIIRRAAENDEQVDQLTERMIAAMHEDEERLFVLRPDQEPRATAHMGDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ M++ L+ G AY +NG DV Y V F NYG+L+ ++I + E K+
Sbjct: 122 IDMVQSLVEKGYAYPASNG----DVYYRVERFANYGRLTNKVIEDLRSGARVEVEEAKES 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E+ W+S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 178 PLDFVLWKAAK---PGEVSWDSPWGKGRPGWHIECSAMSKCCLGETFDIHGGGPDLPFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +V+YWMH+G V++ +KMSKS GNF TIRD+L+ Y+ EV+R+F+
Sbjct: 235 HENEIAQSEAANGCTYVHYWMHAGPVRMGTEKMSKSLGNFFTIRDVLEHYDAEVVRYFLS 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS I+YSE L A+ +L R Y A++ ++ + + + +RF AM+DDFN
Sbjct: 295 SVHYRSYIDYSEDGLKEARSALERFYQALQAAGDLSTAE-GGVGSEYEERFFAAMDDDFN 353
Query: 363 TPVAISILFDLANIINK--NKSIKMAK----QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF+LA+ +NK + + +AK +L+ L +GLL+ D FLK
Sbjct: 354 TPRALAVLFELASELNKAVREQLPIAKPLALELKRLAGMIGLLQQDPDAFLKGE-----A 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I I R++ARK +NF EAD+IR EL+ GI+L+D G T W R
Sbjct: 409 AEGELDAEAIDSLIDKRNQARKDRNFAEADRIRDELLEQGIVLKDSREG-TNWYR 462
>gi|425900324|ref|ZP_18876915.1| cysteine--tRNA ligase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397889934|gb|EJL06416.1| cysteine--tRNA ligase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 460
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V FL YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFLGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPTVPAAG----GEAFVERFTEVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +LR L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLRELADVLGVLQLDADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIQARLAARANKDWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +I +I
Sbjct: 62 KFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IELVEKLIDRGFAYVADNG----DVMFEVSKFDKYGKLSKQDLDQLQAGARVDVESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ +L RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARSALERLYTSLR---GLDLDAEPTGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K++ + + +R L + +G+L + FLK +
Sbjct: 352 TPEAYSVLFDMAREINRLKTVDLGQASQLGALMRELADVIGILHQDPEAFLKGD------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 406 AGDNDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WRR 459
>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 459
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/479 (47%), Positives = 305/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GK+ +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +NNES + LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIITRANENNESCEALTERLIGEMHRDFDALNMKRPDIEPKATEYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + + K+
Sbjct: 122 IQLVEKLIERGFAYVADNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDVESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDSETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKD----IPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NYSE LN A+ L RLY +++ +P + E + RF AMN
Sbjct: 295 SGHYRSQLNYSEENLNQARAGLERLYTSLRGLDLTVPAAD-------GEEYVSRFTEAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A IN+ K+ + LR L + +G+L + FL+
Sbjct: 348 DDFNTPEAYSVLFDMAREINRVKATDNEHASALGSLLRELADVIGILHQDPEAFLQG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ K V E IKL R+++R K++ AD R +L GI+LED P+G T WRR
Sbjct: 405 SDDKDQVAEIEALIKL----RNDSRAAKDWATADVARDKLTAMGIVLEDGPSGTT-WRR 458
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 304/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGQFDEYGKLSKQDLDQLQAGARVDVESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DL P A KRF A
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLRGL---------DLTVPAAGGEEYVKRFTEA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A IN+ ++ M +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKNDNLEQASAMGSLMRELADVIGILHQEPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + V E IKL R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDE--VAEIEGLIKL----RNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|407364085|ref|ZP_11110617.1| cysteinyl-tRNA ligase [Pseudomonas mandelii JR-1]
Length = 460
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 QTMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVERLIERGFAYVADNG----DVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRC 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ +++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDFSAAPAGGEEYVSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A +R L + +G+L D FLK + + +
Sbjct: 352 TPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPDAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPEGTT-WRR 459
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 313/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G++ +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKIIA A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIARANENGETIQQLTARFIDAMNEDAANLGCVAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMISTLVDKGAAYP----ATNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K ++ +K ++ L + +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVETLEQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A+Q LR L N LGL+++ DEFLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATALYSTLRQLTNILGLVQHDVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LTLSDTEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 308/482 (63%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V YVRNITDIDDKII A +N ESI LT RFI+A ED+ L PD P AT+YI
Sbjct: 61 WSVKYVRNITDIDDKIIKRANENGESITQLTDRFIQAMNEDAENLGCLHPDEAPRATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY + NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQSMIGNLVEKGTAYPS----ANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---AWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD++ K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK +L R Y + K + +D L+E +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETLLERFNSA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT AI++LF++ +N+ + +Q LR L N LGL++++ +EFLK+
Sbjct: 354 MRDDFNTAEAIAVLFEVNKELNRAVKEQQTEQAAIYYATLRHLTNILGLVQHNVEEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + SE I+ I R +A+K K F +AD+IRQ L++ G++LED G T W
Sbjct: 414 DIGQE---ALALSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTRQG-TIW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|383935040|ref|ZP_09988478.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703805|dbj|GAB58569.1| cysteinyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 459
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/477 (48%), Positives = 308/477 (64%), Gaps = 29/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SRKK++F PI PGK LYVCGIT YDYCH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIYNTLSRKKELFTPIVPGKAGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNES LT+RF KA D L + P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESCDALTARFTKAMHADFNALGLMPADIEPRVTTHMAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLIS--SNFNKINEKNNFKK 181
++MIE+L+ G AY +GDV + V + YG+LS + + ++N N K
Sbjct: 122 IQMIEQLLAKGYAYV----AADGDVLFDVSKYEAYGELSQQNLDMLQAGARVNVAEN-KD 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +PY W S WG GRPGWHIECSAMS LG HFDIHGGG DL+FP
Sbjct: 177 DPLDFVLWKSAKPGEPY---WQSPWGNGRPGWHIECSAMSAKHLGEHFDIHGGGSDLQFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ HK+VN W+H+G V+++ +KMSKS GNF T++D+L +YN E +R+F+
Sbjct: 234 HHENEIAQSTCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLAQYNAEAVRYFL 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMNDD 360
L SHYRS +NYS L A +L RLY A+++I P + +DL + RF AM+DD
Sbjct: 294 LSSHYRSQLNYSAENLEQAHAALGRLYTALRNITPAAD----VDLQSDYIARFKAAMDDD 349
Query: 361 FNTPVAISILFDLANIINKNKSIKMAK--QLRG----LGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A+ +LF+LA +N+ K + AK +L G L LGLL+ +++FL++ +
Sbjct: 350 FNTPEALPVLFELAREVNRFKETEPAKAAELAGVLSLLAGVLGLLQGDAEQFLQSGTSDD 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+ AR K++ AD R L GII+ED NG T WR+
Sbjct: 410 DVA-------EIEALIAQRNTARANKDWAAADAARDALTAKGIIVED-KNGVTSWRK 458
>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|424032917|ref|ZP_17772333.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|408875278|gb|EKM14429.1| cysteine--tRNA ligase [Vibrio cholerae HENC-01]
Length = 460
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 303/481 (62%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVTRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGDDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 460
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 303/481 (62%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 301/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + VR F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVRQFKEYGKLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDSNAAPAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTENVEKASELGALMRELADVIGILHQDPEAFLKGDAGDDEE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGSEGTT-WRR 459
>gi|198283982|ref|YP_002220303.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665072|ref|YP_002426619.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198248503|gb|ACH84096.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517285|gb|ACK77871.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 462
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/478 (48%), Positives = 310/478 (64%), Gaps = 27/478 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ + ++++ R K + P V LYVCG+T YD+CHLGHAR+M+ FD V R+LR
Sbjct: 4 LPVVTLFDTLRRSKTPLEVLRPNHVGLYVCGMTVYDFCHLGHARVMVTFDTVVRYLRERG 63
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+VTYVRNITDIDDKII A + ESI++LT+RFI A ED L + PD +P AT ++
Sbjct: 64 YEVTYVRNITDIDDKIIRRALECGESIQSLTARFIDAMHEDEAALLCRRPDLEPRATEHV 123
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNF 179
+ +I +LI G AY NGDV Y+VR+F YG+LSG+ I + E
Sbjct: 124 GAMQTLIGELIHRGHAYV----AANGDVYYAVRSFPEYGRLSGKSIDELTSGARVEVGEE 179
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL+
Sbjct: 180 KRDPLDFALWKAAKPGEP---SWPSAWGEGRPGWHIECSAMSADALGCAFDIHGGGADLQ 236
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS+GA F +YWMH+GFV+IN++KMSKS NF T+R+LL +Y+ EV+RF
Sbjct: 237 FPHHENEIAQSQGA-GCAFAHYWMHNGFVRINDEKMSKSLNNFFTVRELLPRYSGEVLRF 295
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
FIL SHYRS +NY+E L A+ L RLY A++ +P+ K + ++ +RF AM+D
Sbjct: 296 FILSSHYRSPLNYAEDALEQARAGLTRLYTALRGMPRP--KIVAEMGSEWRERFHAAMSD 353
Query: 360 DFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DF+TP A+++LFDLA +N+ + + +A LR L LGLL+ ++ FL+ +
Sbjct: 354 DFHTPAALAVLFDLARELNRLRDEGSEVAAPLATLLRELAGVLGLLQQDAEGFLRGH--- 410
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V++ I +I R+ AR+ ++F AD IRQEL G+ILED P G T WRR
Sbjct: 411 --DADVSW----IDGRIAARAAARQARDFAGADAIRQELTAAGVILEDGPGGTT-WRR 461
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/476 (46%), Positives = 304/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI G++ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I +D L I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ +LI G AY +NG DV + V + +YG LS + L E K++
Sbjct: 122 IELVGRLIERGHAYVADNG----DVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P WNS WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEPA---WNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEVAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDVSAVAAGGEEFEARFRTAMDDDFN 351
Query: 363 TPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N K + +A +LR L LG+L+ ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDKTAADALAAKLRQLAEVLGILQQDPEQFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N E +I+ I R++AR+ K++ +AD R +L GI+LED P G T WRR
Sbjct: 406 AQANDDEVAEIEALIKMRNDARQAKDWAQADVARDKLNALGIVLEDGPQGTT-WRR 460
>gi|398974104|ref|ZP_10684841.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM25]
gi|398141988|gb|EJM30893.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM25]
Length = 460
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTTVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 302/481 (62%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + RF A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRFTAA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ K+ ++ +R L +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELAEVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5.2|SYC_VIBVY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 303/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVERLIERGFAYVADNG----DVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRC 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ +++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDFSAAPAGGEEYVSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A +R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P+G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPDGTT-WRR 459
>gi|374705751|ref|ZP_09712621.1| cysteinyl-tRNA synthetase [Pseudomonas sp. S9]
Length = 460
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/474 (46%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K+ P+ +V +YVCG+T YD+CH+GHAR+M+ FD++ RWLR Y++
Sbjct: 2 LTIYNTLSKTKEALKPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVIARWLRFRGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N E + L R I A ED L + PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIIRRAQENGEGFEVLVERMIAAMHEDEARLSVLRPDMEPRATSHISGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HEMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWTSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+F++
Sbjct: 235 HENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYFLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
S YRS INYSE L AK +L R Y A+K +P+ + +A+RF AM+DDFN
Sbjct: 295 SSQYRSPINYSEDSLKEAKGALERFYHALKGLPEAAPAG----GDAYAERFAEAMDDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
+P A ++LF++ IN+ + +A +L+ L + LG+L+ + FL+ K
Sbjct: 351 SPEACAVLFEMVREINRLRDTDLEAAAGLAARLKQLASVLGVLQLEPESFLQAGA----K 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ + D I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAEQVDA--LIAARLQARSEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|422664696|ref|ZP_16724569.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330975115|gb|EGH75181.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 460
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+ EV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHTEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKGGTT-WR 457
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/478 (47%), Positives = 301/478 (62%), Gaps = 25/478 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L+IYNS +R+KQ F PITPGKV +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V + RNITDIDDKII A +N E TLT R I +D L++ PD++P AT +I
Sbjct: 61 YEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
+I+ M+E+L+ G AY +GDV +SV +F YG+LSG+ L E ++
Sbjct: 121 AEIIDMVERLLARGHAYV----AADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDN 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL+
Sbjct: 177 KQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+PE +R+
Sbjct: 234 FPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L HYRS INYSE L A+ +L RLY AIKD ++ E +F AM+D
Sbjct: 294 FLLSGHYRSQINYSEENLKQARAALERLYTAIKD---VDLTVAPAPAEEFVAKFKAAMDD 350
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A S+LFD+ IN+ K+ MA+ ++ L + LGLL + D F K
Sbjct: 351 DFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKG---- 406
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G++LED P+G T WR+
Sbjct: 407 ---EGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTT-WRK 460
>gi|426408691|ref|YP_007028790.1| cysteinyl-tRNA synthetase [Pseudomonas sp. UW4]
gi|426266908|gb|AFY18985.1| cysteinyl-tRNA synthetase [Pseudomonas sp. UW4]
Length = 460
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPFDALTERMITAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAQ--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 301/475 (63%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNE++ +LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ + LI G AY +NG DV + V+ NYG+LS + L E + K++
Sbjct: 122 IEITDLLIKRGHAYVADNG----DVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+PE +R+F+L
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ K E KRF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALRGTDK---SVAPAGGEIFKKRFEDAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS ++A +LR L LGLLE + FL+ N E
Sbjct: 352 TPEAYSVLFDMAREINRLKSENKVAANELASELRKLAGVLGLLEQDPEAFLQGNAQGEGD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ V E IK R++ARK K + AD R EL GI+LED G T WRR
Sbjct: 412 EEVAKIEALIKQ----RNDARKNKEWALADAARDELTAMGIVLEDGAQGTT-WRR 461
>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 509
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 303/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 51 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 110
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ +LT R I D L+++ PD +P AT YI +I
Sbjct: 111 TFVRNITDIDDKIIKRAAENGETCDSLTERLIGEMHADFDALNMKRPDVEPRATQYIQEI 170
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 171 IELVERLIERGFAYVADNG----DVMFEVNKFDEYGKLSKQDLDQLQAGARVDVETAKRC 226
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 227 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 283
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 284 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 343
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ +++ E + RF AMNDDFN
Sbjct: 344 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDFSAAPAGGEEYVSRFTAAMNDDFN 400
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A +R L + +G+L + FLK + + +
Sbjct: 401 TPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLKGDAGNDDE 460
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P+G T WRR
Sbjct: 461 VA------EIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPDGTT-WRR 508
>gi|359780008|ref|ZP_09283235.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
gi|359372624|gb|EHK73188.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
Length = 461
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 295/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L +YN+ ++ K+ F P+ PG+V +YVCG+T YDYCHLGH R M+ FD++ RWLR + YD
Sbjct: 2 ALHLYNTLTKTKEAFTPLVPGQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHSGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII A N E L +R I+A ED L+I+ PD +P AT++I
Sbjct: 62 LTYVRNITDIDDKIINRANANGEPFTDLVARMIEAMHEDEARLNIRKPDQEPRATDHIDG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F YGKLS R + E K+
Sbjct: 122 MHAMIQTLIDKGYAYAAGNG----DVYYRVNRFAGYGKLSRRRVEDLRIGARIEPGEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FP
Sbjct: 178 DPLDFVLWKAAK---PGEPSWPSPWGEGRPGWHIECSVMSTCCLGETFDIHGGGNDLEFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N W+H G + IN +KMSKS GNF T+R++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKTYANAWLHCGMITINGEKMSKSLGNFFTLREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y ++K +P+ K E +A+RF M+DDF
Sbjct: 295 IASHYRSPINYSEDNLREAKGALERFYHSLKGLPQAPAKG----GEGYAERFAQCMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NT A +LF+LA IN+ + +A +LR LG LG+L+ + FL+ +
Sbjct: 351 NTAGACGVLFELAREINRLRESDPAAAAGLAGRLRELGEVLGVLQLEPEAFLR----ADA 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGRVDAAE--VEALIQARLAARAEKNWAESDRIRDQLTALGVVLEDGKGGTT-WR 458
>gi|399003440|ref|ZP_10706104.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM18]
gi|398122919|gb|EJM12500.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM18]
Length = 460
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 294/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES + LT R I A ED L+I PD +P AT +I +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFEALTERMIAAMHEDESRLNILKPDMEPRATGHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|451936282|ref|YP_007460136.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777205|gb|AGF48180.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 485
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/494 (48%), Positives = 319/494 (64%), Gaps = 35/494 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R K F PI V++YVCG+T YDYCHLGHAR+M+VFD++QRWL+ +DV
Sbjct: 2 LQIYNTLTRSKSDFKPINDNVVNMYVCGMTVYDYCHLGHARIMVVFDVIQRWLKNIGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII + ++SIK +T +I A D L+I+ P +P AT+Y+ ++
Sbjct: 62 RYVRNITDIDDKIINKSLSEHKSIKEITEFYISAMHMDEKALNIETPFKEPKATDYVNEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN-----N 178
+ +I+ L GLAY+ ++GDVN+S++NF +YGKLSG N N++ N +
Sbjct: 122 VDIIKLLEGKGLAYK----ALDGDVNFSIKNFNDYGKLSG----INLNELRSGNRVSVSS 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
FK DPLDF LWK K NDPY+ RW+S +G GRPGWHIECSAMS +LG+ DIHGGG DL
Sbjct: 174 FKADPLDFVLWKSYKKNDPYDSRWDSCYGVGRPGWHIECSAMSHSILGNPIDIHGGGPDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK------- 291
FPHHENEIAQ+EGA+ N+WMH G + +++ KMSKS GN+ TIR + K
Sbjct: 234 IFPHHENEIAQTEGAFGTNLANFWMHCGPLMVDDAKMSKSLGNYYTIRQAIGKEILPVDF 293
Query: 292 ------YNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL 345
E++RFFI+RSHYRS NY+ L A+ SL +LYL + +I + +D
Sbjct: 294 RYEVNLREAEMLRFFIIRSHYRSKQNYTFENLVDAQNSLDKLYLVLFNINVKSEDCRVDW 353
Query: 346 NEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDE 405
++ + F +AMNDDFNTP AI+ILFDLA+ NKNK I A QL+ L LG+L S D
Sbjct: 354 SDKFSDAFKLAMNDDFNTPNAIAILFDLASKANKNKCIHSATQLKSLAGILGIL--SQDP 411
Query: 406 FLKNNIYTERKKNVN-------YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ + T K +VN S+ DI+ I RS ++ ++LEADKIR L ++GI
Sbjct: 412 MVYFSEPTRYKISVNRNDSADILSKEDIENLICKRSYFKRNNDYLEADKIRSMLNDSGIE 471
Query: 459 LEDMPNGKTEWRRI 472
LED NG T WRR+
Sbjct: 472 LEDTSNGNTNWRRV 485
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 298/475 (62%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A + + + LT R I +D L + PD +P AT +I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAETHVTCDDLTERLIGDMHQDFDALGMVRPDIEPRATQHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E L+ G AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IALVETLLEKGHAYVADNG----DVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPLAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K+ MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKAEDMAVAAGLGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/492 (47%), Positives = 301/492 (61%), Gaps = 32/492 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+ L+IY+S + K+ F P+ GK+ +YVCG+T YDYCH+GHAR+M+ FD+V RWLR Y
Sbjct: 23 AALKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGY 82
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
+V YVRNITDIDDKIIA A +N E I LT RFIKA ED+ L + PD +P AT +I
Sbjct: 83 EVNYVRNITDIDDKIIARANENGEPIGELTHRFIKAMHEDAAALGCENPDAEPRATEHID 142
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFK 180
++L MI L AY +NG DV Y+V F YGKLS R + + + K
Sbjct: 143 EMLDMIGTLEQKQHAYAASNG----DVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDTDK 198
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
K+P DF LWK +K +P +W S WG GRPGWHIECSAMS LG+ FDIHGGG DL+F
Sbjct: 199 KNPFDFVLWKAAKAGEP---QWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQF 255
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQSE A + + WMH GF+ ++ +KMSKS GNF TIR++++K++PE IRFF
Sbjct: 256 PHHENEIAQSEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREVMQKFHPETIRFF 315
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI------NYKKIIDLNEPHAKR-- 352
IL SHYRS +N+S+ L A L R+Y A+K + + I +N HA
Sbjct: 316 ILSSHYRSQVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAESIESINAEHAGTHS 375
Query: 353 --FIIAMNDDFNTPVAISILFDLANIINK-----------NKSIKMAKQLRGLGNWLGLL 399
FI AMNDDFNTP AIS+LF LA +NK + A QLR L L +
Sbjct: 376 ADFIAAMNDDFNTPQAISVLFSLAKEVNKLARDADDADTQAQLQLQAVQLRALAGILNIG 435
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
+ + EFL+ I + + S+ I+ I R +++ KNF AD+IR L N+GI L
Sbjct: 436 QLNPAEFLQAQIGEVAEDQM--SDEQIEALIQERLDSKANKNFARADEIRDLLQNSGIEL 493
Query: 460 EDMPNGKTEWRR 471
ED G T WRR
Sbjct: 494 EDGKLGTT-WRR 504
>gi|451812030|ref|YP_007448484.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium galatii
TCC219]
gi|451777932|gb|AGF48880.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium galatii
TCC219]
Length = 483
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/491 (48%), Positives = 320/491 (65%), Gaps = 33/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ ++ K F PI V++YVCG+T YDYCHLGHAR+M+VFD+VQRWLR ++V
Sbjct: 2 LQIYNTLTKAKSDFKPINDNVVNMYVCGMTVYDYCHLGHARIMVVFDVVQRWLRHIGFNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII + N+SI+ +T ++ A D L I+ P +P ATNY+ ++
Sbjct: 62 RYVRNITDIDDKIINKSLSENKSIREITDFYVSAMHMDEKALSIETPFKEPRATNYVNEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG----RLISSNFNKINEKNNF 179
+ +I+ L GLAY++ ++GDVN+S++NF NYGKLSG L S N ++ +F
Sbjct: 122 VSIIKLLENKGLAYKS----LDGDVNFSIKNFTNYGKLSGINLTELRSGNRVPVS---SF 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK SK +DP + +W S +G GRPGWHIECSAMS +LG+ DIHGGG DL
Sbjct: 175 KADPLDFVLWKSSKKDDPDDSKWESCYGPGRPGWHIECSAMSRSILGNPIDIHGGGPDLI 234
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL-KKYNP---- 294
FPHHENEIAQ+EGA+ N+WMH G + +++ KMSKS GN+ TIR + KK +P
Sbjct: 235 FPHHENEIAQTEGAFDVNLANFWMHCGSLMVDDAKMSKSLGNYYTIRQAVGKKISPNEFY 294
Query: 295 --------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
E++RFFI+RSHYRS NY+ L A+ SL +LYL + +I + ID +
Sbjct: 295 YEVNTREAEMLRFFIIRSHYRSKQNYAFENLVDAQNSLDKLYLTLFNI-NVEGDCEIDWS 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ A F AMNDDFNTP AI+ILFDLA+ NKNK ++ AKQL+ L LG+L + +
Sbjct: 354 DQFAISFKSAMNDDFNTPSAIAILFDLASKANKNKCVRSAKQLKSLAGVLGILSQNPTVY 413
Query: 407 LKNNIYTERKKNVN------YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
T + +VN S+ DI+ IY RS +K ++LEADKIR L ++GI LE
Sbjct: 414 FSEP--TRYRISVNNDSLNIISKEDIEHLIYKRSNFKKNNDYLEADKIRSMLNDSGIELE 471
Query: 461 DMPNGKTEWRR 471
D +G T WRR
Sbjct: 472 DKSDGTTNWRR 482
>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|388600078|ref|ZP_10158474.1| cysteinyl-tRNA ligase [Vibrio campbellii DS40M4]
gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 303/481 (62%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVEKLIERGFAYVADNG----DVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DLN E + R+ A
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGL---------DLNAAPAGGEEYVSRYTAA 345
Query: 357 MNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 308/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDSLNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 132 IAIVEKLIQRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + +N +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVNKEKMSKSLGNFFTIRDVLSHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ I K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGIDK---SAVAFGGENFVDAFRDAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAGILGLLQLDPEQFLQAG------ 415
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R L GI+LED PNG T WR+
Sbjct: 416 -----SDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLEDGPNGTT-WRK 468
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ R+K+IF PI P +V +YVCG+T YD CH+GH R + FD++ R+LR Y +
Sbjct: 2 LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGYHL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N+E+ + L R + +D L+IQ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENHETCEHLVDRMVAEMYKDFDALNIQRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ ++++LI NG AY NG DV + V +F YGKLS + +S E N+ KK+
Sbjct: 122 IALVQRLIDNGHAYVAQNG----DVMFDVDSFPEYGKLSRQDLSQLQAGARVEINDIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+HSG + ++ +KMSKS GNF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE L A +L RLY A++ + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLKLAHSALERLYTALR---GTDANATAAGGEQFIEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LFD+A +NK K+ + A +LR L LGLL + FL+ + +
Sbjct: 352 TPGALSVLFDMARELNKLKAEQNPQTDAFAARLRELAGVLGLLYQDPETFLQAGMDDDET 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K I+ I R++AR K++ AD R +L G+++ED NG T WR+
Sbjct: 412 KI-------IETLIAQRNQARANKDWATADAARDKLAAMGVVIEDGANGTT-WRK 458
>gi|398919136|ref|ZP_10658689.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM49]
gi|398170276|gb|EJM58226.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM49]
Length = 460
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 296/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES++ LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ + LI G AY NGDV + V+ NYG LS + L E + K++
Sbjct: 122 IELTQSLIERGHAYV----AANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L R+Y A++ K + + RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERMYTALRGTDK---SAVPAGGDEFKARFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ +N+ KS MA QLR L LGLLE + FLK TE
Sbjct: 352 TPEAYSVLFDMVREVNRLKSEDMSAANAMAAQLRELAGVLGLLEQDPESFLKGGAQTEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+ I R +AR+ K++ +AD R EL G++LED G T WRR
Sbjct: 412 AEVA----KIEALIQQRLDARQNKDWAQADAARDELTAMGVVLEDGATGTT-WRR 461
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|375131397|ref|YP_004993497.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 306/475 (64%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENQESCESLTERLIQEMYADFDALNIKRPDVEPRATAYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++++LI G AY +NG DV + V F +YGKLS + L + + K+
Sbjct: 122 IELVQRLIDRGFAYVADNG----DVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDMAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDMTVPAAGGEEYLTRFTTAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ +K+ + +R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDTDKASALGALMRELADVIGILYQDPEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P+G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRASKDWANADMARDKLNEMGIVLEDGPSGTT-WRR 459
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/478 (47%), Positives = 301/478 (62%), Gaps = 25/478 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L+IYNS +R+KQ F PITPGKV +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V + RNITDIDDKII A +N E TLT R I +D L++ PD++P AT +I
Sbjct: 61 YEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
+I+ M+E+L+ G AY +GDV +SV +F YG+LSG+ L E ++
Sbjct: 121 TEIIDMVERLLARGHAYV----AADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDN 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL+
Sbjct: 177 KQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+PE +R+
Sbjct: 234 FPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L HYRS INYSE L A+ +L RLY AIKD ++ E +F AM+D
Sbjct: 294 FLLSGHYRSQINYSEENLKQARAALERLYTAIKD---VDLTVAPAPAEEFVAKFKAAMDD 350
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A S+LFD+ IN+ K+ MA+ ++ L + LGLL + D F K
Sbjct: 351 DFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKG---- 406
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G++LED P+G T WR+
Sbjct: 407 ---EGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLEDGPSGTT-WRK 460
>gi|259909186|ref|YP_002649542.1| cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872139|ref|YP_005803519.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 462
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 302/477 (63%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI G + +YVCGIT YD CH+GH R FD+V R+LR + Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+ LT+R I +D L+I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIERLTNRMIDEMHKDFAALNILPPDLEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++++EKLI AY +NG DV +SV + YG LS + + ++ + K+
Sbjct: 122 IELVEKLITREHAYVASNG----DVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C L HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F+
Sbjct: 235 HHENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NY E LN A+ +L RLY+A+++ + + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTRATPAGGEEFEARFREAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S LFDLA +N+ K + +A +LR LG LGLLE +FL++ +
Sbjct: 352 NTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPQQFLQSGV---- 407
Query: 416 KKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N+N E I+ I R +ARK KN+ +AD R L GI+LED G T WRR
Sbjct: 408 --NINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 461
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 297/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES++ LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEALTTRMLAEMHKDFDALNILRPDSEPRATRHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ + LI G AY NGDV + V+ NYG LS + L E + K++
Sbjct: 122 IELTQSLIERGHAYV----AANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L R+Y A++ K + + RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARSALERMYTALRGTDK---SAVPAGGDEFKARFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ +N+ KS MA QLR L + LGLLE + FLK TE
Sbjct: 352 TPEAYSVLFDMVREVNRLKSEDMSAANGMAAQLRELASVLGLLEQDPEVFLKGGAQTEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+ I R +ARK K++ +AD R EL GI+LED G T WRR
Sbjct: 412 AEV----AKIEALIQQRLDARKNKDWAQADAARDELTAMGIVLEDSAQG-TIWRR 461
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/478 (48%), Positives = 301/478 (62%), Gaps = 22/478 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
+ L+I+N+ SR+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD + R+LR
Sbjct: 31 VQMLQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLG 90
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YD+ YVRN+TDIDDKII A +NNE++ +LT+R + +D L+I PD +P AT +I
Sbjct: 91 YDLNYVRNVTDIDDKIIKRAAENNETVDSLTTRMLAEMHKDFDALNILRPDSEPRATQHI 150
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
+I+++ + LI G AY +NG DV + V+ NYG+LS + L E +
Sbjct: 151 DEIIEITDLLIKRGHAYVADNG----DVMFEVKTDKNYGQLSRQDLEQLQAGARVEVADS 206
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL
Sbjct: 207 KRNPMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLM 263
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+PE +R+
Sbjct: 264 FPHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDPETVRY 323
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L HYRS +NY+E L A+ +L RLY A++ K E KRF AMND
Sbjct: 324 FLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDK---SVAPAGGEIFKKRFEDAMND 380
Query: 360 DFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A S+LFD+A IN+ KS ++A +LR L LGLLE + FL+ N
Sbjct: 381 DFNTPEAYSVLFDMAREINRLKSENKVAANELASELRKLAGVLGLLEQDPEAFLQGNAQG 440
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E + V E IK R+ ARK K + AD R EL GI+LED G T WRR
Sbjct: 441 EGDEEVAKIEALIKQ----RNNARKNKEWALADAARDELTAMGIVLEDGAQGTT-WRR 493
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 305/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGETCDSLTERLIGEMHADFDALNMKRPDIEPRATEYIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++KLI G AY +NG DV + + + +YGKLS + L E + K+
Sbjct: 122 IELVQKLIERGFAYVADNG----DVMFEIAKYDDYGKLSRQDLEQLQAGARVEIESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
LDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 SLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DL+ P A KRF A
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLRGL---------DLSTPAAGGEEYVKRFTEA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A IN+ K+ +A +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRVKTEDIATASALGSLMRELADVIGILHQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
++ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 SGSDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|398874612|ref|ZP_10629816.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM74]
gi|398194492|gb|EJM81563.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM74]
Length = 460
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V FL YGKLS + I E + K+D
Sbjct: 122 QSMIQTLIDKGYAYAPGNG----DVYYRVARFLGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTTVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|444427437|ref|ZP_21222819.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239314|gb|ELU50884.1| cysteinyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 460
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 301/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ KLI G AY +NG DV + V F YGKLS + L + K+
Sbjct: 122 IELVAKLIERGFAYVADNG----DVMFEVGKFNEYGKLSKQDLEQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ + E + R+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDLNAVPAGGEEYVSRYTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++ +R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGPEGTT-WRR 459
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43.1|SYC_ALISL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/477 (46%), Positives = 300/477 (62%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +NNES + LT R I D L ++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENNESCEALTERLIAEMHADFDALKMKRPDVEPRATEYITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
++++E+LI G AY +NG DV + V+ F YG+LS + + + E+ + K
Sbjct: 122 VELVERLIERGFAYVASNG----DVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEETSVK 177
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+ +DF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL F
Sbjct: 178 RSGMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLMF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ K+VN WMHSG V I+ +KMSKS GNF TIRD+L Y+ E +R+F
Sbjct: 235 PHHENEIAQSCCAHDAKYVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDSETVRYF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE LN A+ SL RLY +++ ++ E RF AMNDD
Sbjct: 295 LMSGHYRSQLNYSEENLNQARSSLERLYTSLR---GLDLTVTPAGGETFVTRFSTAMNDD 351
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LF++A +N+ K+ K+ +R L LGLL + FL+ + ++
Sbjct: 352 FNTPEAYSVLFEMAREVNRLKTENIEAASKLGALMRELAEVLGLLSQEPEAFLQGDSGSD 411
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR K++ AD R + I+LED P G T WRR
Sbjct: 412 NEVA------EIEALIKARNDARAAKDWSAADAARDAITALNIVLEDGPEGTT-WRR 461
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227118296|ref|YP_002820192.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|360035732|ref|YP_004937495.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741684|ref|YP_005333653.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417813891|ref|ZP_12460544.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417817628|ref|ZP_12464257.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418334866|ref|ZP_12943780.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418338484|ref|ZP_12947378.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418346401|ref|ZP_12951163.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418350163|ref|ZP_12954894.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418355542|ref|ZP_12958261.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419826827|ref|ZP_14350326.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421318339|ref|ZP_15768907.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421321620|ref|ZP_15772173.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421325417|ref|ZP_15775941.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421329079|ref|ZP_15779589.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421332987|ref|ZP_15783464.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421336576|ref|ZP_15787037.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421340007|ref|ZP_15790439.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421348335|ref|ZP_15798712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422896952|ref|ZP_16934405.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422903151|ref|ZP_16938131.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422907036|ref|ZP_16941843.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422913886|ref|ZP_16948392.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422926092|ref|ZP_16959106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423145411|ref|ZP_17133005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423150087|ref|ZP_17137401.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423153907|ref|ZP_17141088.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423156990|ref|ZP_17144083.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423160561|ref|ZP_17147501.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423165379|ref|ZP_17152110.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423731398|ref|ZP_17704701.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423767016|ref|ZP_17712820.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423895289|ref|ZP_17727036.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423930727|ref|ZP_17731430.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424002842|ref|ZP_17745917.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424006631|ref|ZP_17749601.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424024612|ref|ZP_17764263.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424027497|ref|ZP_17767100.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424586768|ref|ZP_18026347.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424591511|ref|ZP_18030938.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424595416|ref|ZP_18034737.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424599332|ref|ZP_18038513.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424602052|ref|ZP_18041194.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424607022|ref|ZP_18045966.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424610847|ref|ZP_18049686.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424613658|ref|ZP_18052446.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424617639|ref|ZP_18056311.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424622418|ref|ZP_18060926.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424645383|ref|ZP_18083119.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424653150|ref|ZP_18090530.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424656971|ref|ZP_18094256.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440710051|ref|ZP_20890702.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443504209|ref|ZP_21071167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443508106|ref|ZP_21074870.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443511949|ref|ZP_21078587.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443515507|ref|ZP_21082018.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443519298|ref|ZP_21085695.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443524191|ref|ZP_21090404.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443531789|ref|ZP_21097803.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443535585|ref|ZP_21101463.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443539133|ref|ZP_21104987.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449055723|ref|ZP_21734391.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|11387140|sp|Q9KQZ9.1|SYC_VIBCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631647|sp|A5F763.1|SYC_VIBC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781697|sp|C3LNF1.1|SYC_VIBCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|340036377|gb|EGQ97353.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340037351|gb|EGQ98326.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341621711|gb|EGS47448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341621796|gb|EGS47529.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341622546|gb|EGS48200.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341637547|gb|EGS62225.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341646298|gb|EGS70412.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356417575|gb|EHH71190.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356418447|gb|EHH72044.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356423021|gb|EHH76482.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356428467|gb|EHH81693.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356430126|gb|EHH83335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356433480|gb|EHH86669.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356440077|gb|EHH93038.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356444659|gb|EHH97468.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356445658|gb|EHH98460.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356451191|gb|EHI03892.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356452040|gb|EHI04719.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356646886|gb|AET26941.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795194|gb|AFC58665.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395916597|gb|EJH27427.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395917255|gb|EJH28083.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395918614|gb|EJH29438.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395927613|gb|EJH38376.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395928389|gb|EJH39142.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395931675|gb|EJH42419.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395939290|gb|EJH49972.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395942914|gb|EJH53590.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395958976|gb|EJH69427.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395959689|gb|EJH70106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395962555|gb|EJH72851.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395970947|gb|EJH80652.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395973689|gb|EJH83243.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395976039|gb|EJH85503.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408007296|gb|EKG45379.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408013276|gb|EKG51005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408031528|gb|EKG68144.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408032309|gb|EKG68895.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408041832|gb|EKG77920.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408043299|gb|EKG79300.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408053849|gb|EKG88848.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408607617|gb|EKK81020.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408624020|gb|EKK96972.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408633949|gb|EKL06229.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408654159|gb|EKL25301.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408655089|gb|EKL26214.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408845239|gb|EKL85355.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408846012|gb|EKL86124.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408870174|gb|EKM09454.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408878800|gb|EKM17793.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439974274|gb|ELP50451.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443431154|gb|ELS73706.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443435312|gb|ELS81455.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443438932|gb|ELS88647.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443442917|gb|ELS96219.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443447094|gb|ELT03749.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443449525|gb|ELT09816.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443457179|gb|ELT24576.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443461125|gb|ELT32198.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443465233|gb|ELT39893.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448264762|gb|EMB01999.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 459
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG+GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|410092099|ref|ZP_11288640.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
gi|409760592|gb|EKN45723.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
Length = 460
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFQPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWDSPWGPGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVSEPVG----GEAFVERFTAAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ +N+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREVNRLRETDPAAAAGLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR ++ G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 307/476 (64%), Gaps = 26/476 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L ++N+ +RKKQ+F PI PG V +YVCG+T YDYCH+GHAR + FDIV R+LR Y
Sbjct: 2 ALTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGYS 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITD+DDKII A +N E +T RFI+ +D L++ PD +P T+++ +
Sbjct: 62 VKYVRNITDLDDKIIKRAAENGEDFHQVTERFIREMHKDFDALNLVRPDIEPRVTSHMDE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKK 181
I+ MIE+LI NG AY+ NG DV + V F +YGKLS + L + + K+
Sbjct: 122 IILMIERLIENGNAYEAGNG----DVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDAAKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E W+S WG GRPGWHIECSAM+ LGS FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKSAK---PGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A + ++V YWMHSG V+++N+KMSKS GNF TIR +L++Y+ E +R+F+
Sbjct: 235 HHENEIAQSCCANQSEYVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLEQYDAETVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L SHYRS +NY++ L+ A +L RLY A++DI + +L + + F AM+DD
Sbjct: 295 LSSHYRSQLNYTQENLDQAHSALERLYTALRDITPQTASE--ELRSKYWQSFQQAMDDDL 352
Query: 362 NTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N P A+S+LF++A IN+N+ + ++A L L +GLL+ S +EFL+ +
Sbjct: 353 NAPEAMSVLFEIAREINRNRESAPDTAAQLAHVLLELAEVMGLLQQSPEEFLQGDDDDVA 412
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K I+ I R++AR+ K++ AD+ R EL N GI+LED G T WRR
Sbjct: 413 K---------IEALIAKRNQAREDKDWAAADEARDELTNMGIVLEDGAEG-TRWRR 458
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/476 (46%), Positives = 309/476 (64%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI+ KV +YVCG+T YD CH+GH R + FD++ R+LR Y++
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII + +N E+ + L R + +D L++ PD++P AT++I +I
Sbjct: 62 TYVRNITDVDDKIIRRSLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F YGKLS + L E + KK+
Sbjct: 122 IALVEKLIARGHAYVADNG----DVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P WNS WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE L+ A +L RLY A++ K + E +F AMNDDFN
Sbjct: 295 TAHYRSQLNYSEENLDLAHGALERLYTALRGTDK---SAVAFGGENFIAQFTEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN+ K + +A +LR L LGLLE ++FL+
Sbjct: 352 TPNAISVLFEMAREINRLKNEDKLLADGLAARLRELAGILGLLEQDPEDFLQAG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ I R++AR+ K++ AD R EL G+ILED NG T WR++
Sbjct: 406 -SDDAEIAKIEALIKQRNDARQAKDWARADAARNELTTMGVILEDGSNG-TMWRKM 459
>gi|347948730|pdb|3TQO|A Chain A, Structure Of The Cysteinyl-Trna Synthetase (Cyss) From
Coxiella Burnetii
Length = 462
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/477 (46%), Positives = 308/477 (64%), Gaps = 27/477 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+++I+NS +++K+IF PI GKV LYVCG T YDY H+GH R I+FD V R+LR Y+
Sbjct: 4 SVKIFNSLTKQKEIFKPIESGKVKLYVCGXTVYDYXHIGHGRSWIIFDXVVRYLRXRGYE 63
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRNITDIDDKII A +N ES L RFI+ ED L + PD +P AT Y+P+
Sbjct: 64 VTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPE 123
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
I+K+I+KL+ N AY NG DV + VR F +YGKLS R + E ++ K+
Sbjct: 124 IIKLIQKLLDNQYAYTGQNG----DVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKR 179
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E +W+S WG GRPGWHIECSA S +LG FDIHGGG DLKFP
Sbjct: 180 DPLDFVLWKKAK---PGEPKWDSPWGEGRPGWHIECSAXSSSILGQPFDIHGGGLDLKFP 236
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + FV W H+G ++IN +K SKS GN +IR+ LK+ + EV+R+F+
Sbjct: 237 HHENEIAQSEAGEEKPFVKLWXHAGLLEINKEKXSKSLGNIISIREALKESDVEVLRYFL 296
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
L HYR+ ++YS+ L + +L R YLA++ +P +N++K + RF A +DDF
Sbjct: 297 LSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEK----TSSYTDRFYEAXDDDF 352
Query: 362 NTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
NTP+A ++LF+ IN+ K+ +A +L+ LGN GLL+YS ++FL+
Sbjct: 353 NTPIAFALLFEXVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA---- 408
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
KK + E IK I R+EAR +K++ AD+IR +L + G+ +ED +G T WR+
Sbjct: 409 -KKEADVQE--IKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG-TSWRQ 461
>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
Length = 478
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/483 (47%), Positives = 306/483 (63%), Gaps = 21/483 (4%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ +R+K IF PI GK+ LYVCG+T YDYCH+GHAR++I FD++ R+LR +D
Sbjct: 2 ALTIYNTLAREKVIFTPIDAGKIRLYVCGMTVYDYCHIGHARVLISFDVIVRFLRSQGWD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRNITD+DDKII A++N ES + L RFI A ED L+I PP+ +P AT ++
Sbjct: 62 VEYVRNITDVDDKIINRAEENGESSEILAQRFIDAMHEDERALNILPPNQEPRATAHMDN 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
I+ M++ LI AY +N DV Y V F NYG+LSG+ E + K+
Sbjct: 122 IIAMVKTLINKNYAYVASNN----DVYYRVGKFGNYGQLSGKKPDELMAGARVEVGDIKE 177
Query: 182 DPLDFALWK------VSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGG 235
DP DFALWK V + + W S WGAGRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 178 DPRDFALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMSKSCLGNSFDIHGGG 237
Query: 236 QDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
DL FPHHENEIAQSE A K+VNYW+H+G V+++ +KMSKS GNF TIRD+LKKY+ E
Sbjct: 238 PDLPFPHHENEIAQSEAANGCKYVNYWLHAGAVRVDGEKMSKSLGNFFTIRDVLKKYHSE 297
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFI 354
VIR+ I+ SHYRS+INYSE L AK L R Y +K + I L++ + + F+
Sbjct: 298 VIRYLIVNSHYRSSINYSEDNLIEAKSGLDRFYQTLKHYTDVEPAAIESLSDSVYYQHFV 357
Query: 355 IAMNDDFNTPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
+MNDDFNT +A+S +++L IN K+ K+ +L+ + N LG+L+ EFL+
Sbjct: 358 DSMNDDFNTRIALSGMYELIKTINTVAVDDAEKAKKLVAELKAMANILGVLQADPTEFLQ 417
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
T + V S + I+ I R +A+K K + AD IRQ+L + G++LED G T
Sbjct: 418 AEDKTSQV--VGLSIDVIETLISQRIQAKKDKQYQRADDIRQQLDDQGVLLEDSREG-TA 474
Query: 469 WRR 471
WRR
Sbjct: 475 WRR 477
>gi|422674877|ref|ZP_16734227.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330972601|gb|EGH72667.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 460
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCH G+ R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHPGYGRSMVAFDLVTRWLRFSGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A++N ES LT+R I+A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRARENGESFDALTARMIEAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + + A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR + G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGKGGTT-WR 457
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/477 (48%), Positives = 308/477 (64%), Gaps = 28/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S++K+ F P+ GKVS+YVCG+T YD CH+GH R + FD V R+LR YD+
Sbjct: 2 LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
++RNITD+DDKII A +NNES LT+RF KA D L+I PD +P T ++P +
Sbjct: 62 NFIRNITDVDDKIIKRANENNESCDALTARFTKAMHRDFDALNILRPDLEPRVTEHMPDV 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ MI+ LI AY +NG DV +SV +F YGKLSG+ ++ + E++ K
Sbjct: 122 IAMIKTLIEKQHAYVASNG----DVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEES--K 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
DPLDF LWK+SK N+P W S WGAGRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 176 HDPLDFVLWKMSKENEP---SWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTF 232
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ + N WMHSG V+++ KMSKS NF TI+D+L+ Y+ E +R+F
Sbjct: 233 PHHENEIAQSCCAHDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLEAYDAESVRYF 292
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE L A+ SL RLY A++D+ I+ I N H + F AM+DD
Sbjct: 293 LISGHYRSQLNYSEDNLKQARASLERLYTALRDV-DISDAPIAKDNS-HYQAFCKAMDDD 350
Query: 361 FNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A+++LF+LA +NK K + ++A LR LGN LGLL+ S+D+FL+ + E
Sbjct: 351 FNTPEALAVLFELAKALNKAKLSADKSAPELALLLRTLGNVLGLLDQSADDFLQGD---E 407
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+L I R++AR K++ AD R +L I+LED NG T WR+
Sbjct: 408 SSAEV----EKIELLIKQRNDARANKDWASADDARAQLSALNIVLEDGANGTT-WRK 459
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/482 (47%), Positives = 300/482 (62%), Gaps = 28/482 (5%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
Y+S + KQ F P+ GKV +YVCG+T YDYCH+GHAR+M+ +D++ RWLR Y+V YV
Sbjct: 15 YDSLTASKQYFEPLDAGKVGMYVCGMTIYDYCHIGHARIMVAYDVISRWLRQLGYEVNYV 74
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +NNE I LT RFI A +D L L PP+ +P AT+YI ++ +
Sbjct: 75 RNITDIDDKIINRAAENNEPINELTERFITAMHDDELALGCIPPNQEPRATDYIDEMQDI 134
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLD 185
IE L+ AY N G DV Y+V +F YGKLS R L E N K++P D
Sbjct: 135 IETLVAGSYAYAGNKG----DVYYAVDSFAGYGKLSKRNLDEMQAGSRVEVENDKRNPFD 190
Query: 186 FALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHEN 245
F LWK +K P E +W S WG GRPGWHIECSAMS LG+ FDIHGGG DL+FPHHEN
Sbjct: 191 FVLWKAAK---PGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQFPHHEN 247
Query: 246 EIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSH 305
EIAQSE + K+ WMH GF+ ++ +KMSKS GNF TIRD++ KY+ E +R+F+L SH
Sbjct: 248 EIAQSEASTGCKYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMAKYHSETVRYFLLSSH 307
Query: 306 YRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE---------PHAKRFIIA 356
YRS +N+S++ L+ A SL RLY +K I + + +++NE FI A
Sbjct: 308 YRSQVNFSDVALDEAHNSLSRLYNTLK-IAEQQKGQTLEINEHLINDAYSSDAGYFFIQA 366
Query: 357 MNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
MNDDFNT A S+LF LA INK +K+ + A+QL+ L L +L+ +FL+
Sbjct: 367 MNDDFNTSAATSVLFGLARDINKAIKSEEVDKAWQWAQQLKALAQVLNILQQPVSQFLQ- 425
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+ + ++ I I R+EA+ K+F AD++R++L GI LED G T W
Sbjct: 426 -AVAGDQADDGLTDAVIDGLIIERAEAKANKDFTRADEVREQLKAAGIELEDSRAGTT-W 483
Query: 470 RR 471
RR
Sbjct: 484 RR 485
>gi|301630357|ref|XP_002944288.1| PREDICTED: cysteinyl-tRNA synthetase-like [Xenopus (Silurana)
tropicalis]
Length = 433
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 293/442 (66%), Gaps = 15/442 (3%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GHAR M+ FD+VQRWLR + VT+VRNITDIDDKII A ++ E+
Sbjct: 1 MYVCGMTVYDLCHVGHARSMVAFDVVQRWLRASGLAVTFVRNITDIDDKIIRRAVESGET 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I LT R I D+ L ++ P + P AT+Y+PQ+L ++ +L GLAY+ +G
Sbjct: 61 IGALTRRMIDEMYRDADALGVERPTHDPRATDYVPQMLDIVRRLEDQGLAYRAPSG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DVN++VR F YGKLSG+ + + + K+DPLDF LWK +K N+P E +W+S
Sbjct: 117 DVNFAVRKFPGYGKLSGKTLDELQAGERVAVQDGKQDPLDFVLWKAAKANEPQEAKWDSG 176
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
+G GRPGWHIECSAM LLG FDIHGGG DL+FPHHENEIAQSEGA +WMH+
Sbjct: 177 YGQGRPGWHIECSAMCGALLGQTFDIHGGGADLQFPHHENEIAQSEGANGQPLARFWMHN 236
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
GF+ I+N+KMSKS GNF TIRD+L +++ E IRFF++RSHYRS +NYS+ +L A+ L
Sbjct: 237 GFINIDNEKMSKSLGNFFTIRDVLGQFDAETIRFFVVRSHYRSPLNYSDAHLQDARGGLK 296
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY A+ + ID +P+A RF AM++DF TP A+++LFDLA +N+ +S +
Sbjct: 297 RLYTALSVVAPAEVP--IDWADPYAARFKAAMDEDFGTPEAVAVLFDLAGEVNRRRSATL 354
Query: 386 AKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEA 445
A QL+ LG LGLL+ + FL + + I +I R+ A+ +NF EA
Sbjct: 355 AGQLKALGGCLGLLQGDAQTFL--------QAGTGLDASAIAAQIAARAAAKGARNFAEA 406
Query: 446 DKIRQELVNNGIILEDMPNGKT 467
D+IR EL+ GI+L+D P G T
Sbjct: 407 DRIRAELLAQGIVLKDSPAGTT 428
>gi|398996429|ref|ZP_10699286.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM21]
gi|398126960|gb|EJM16381.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM21]
Length = 460
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/474 (47%), Positives = 295/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES + LT R I A ED L+I+ PD +P AT +IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFEALTERMIAAMHEDEARLNIKKPDMEPRATGHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/478 (47%), Positives = 300/478 (62%), Gaps = 25/478 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L+IYNS +R+KQ F PITPGKV +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V + RNITDIDDKII A +N E TLT R I +D L++ PD++P AT +I
Sbjct: 61 YEVNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMIRPDFEPRATLHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNF 179
+I+ M+E+L+ G AY +GDV +SV +F YG+LSG+ L E ++
Sbjct: 121 AEIIDMVERLLARGHAYV----AADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDN 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL+
Sbjct: 177 KQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R+
Sbjct: 234 FPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L HYRS INYSE L A+ +L RLY AIKD ++ E +F AM+D
Sbjct: 294 FLLSGHYRSQINYSEENLKQARAALERLYTAIKD---VDLTVTAAPAEEFVAKFKAAMDD 350
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A S+LFD+ IN+ K+ MA+ ++ L + LGLL + D F K
Sbjct: 351 DFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKG---- 406
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G++LED P+G T WR+
Sbjct: 407 ---EGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLEDGPSGTT-WRK 460
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/481 (46%), Positives = 304/481 (63%), Gaps = 36/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 IELVEKLIERGFAYVASNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE LN A+ SL RLY +++ + DL P A RF A
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLRGL---------DLTTPAAGGEEYVSRFTEA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A IN+ K+ +A +R L + +G+L + FLK +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKAEDIAAASALGSLMRELADVIGILYQDPEAFLKGD 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R+++R K++ AD R +L GI+LED P G T WR
Sbjct: 406 AGNDDEVA------EIEALIKLRNDSRASKDWANADLARDKLNEMGIVLEDGPEGTT-WR 458
Query: 471 R 471
R
Sbjct: 459 R 459
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/476 (46%), Positives = 310/476 (65%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI+ KV +YVCG+T YD CH+GH R + FD++ R+LR Y++
Sbjct: 2 LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ + L R + +D L++ PD++P AT++I +I
Sbjct: 62 TYVRNITDVDDKIIRRALENKETCEQLVDRMVVEMYKDFDALNVLRPDFEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F YGKLS + L E + KK+
Sbjct: 122 IALVEKLIARGHAYVADNG----DVMFDVESFKEYGKLSRQDLTQLQAGARVEISEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P WNS WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE L+ A +L RLY A++ K + E +F AMNDDFN
Sbjct: 295 TAHYRSQLNYSEENLDLAHGALERLYTALRGTDK---SAVSFGGENFIAQFTEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN+ K + +A +LR L + LGLL+ ++FL+
Sbjct: 352 TPNAISVLFEMAREINRLKNEDKLLADGLAARLRELASILGLLDQDPEDFLQAG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ I R++AR+ K++ AD R EL G+ILED NG T WR++
Sbjct: 406 -SDDAEIAKIEELIKQRNDARQAKDWARADAARNELTTMGVILEDSSNG-TMWRKM 459
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 303/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 IELVEKLIERGFAYVASNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF +WK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVVWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRDLL Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDLTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +SI+ A L R L + +G+L + FL+ +
Sbjct: 352 TPEAYSVLFEMAREINRIKTESIEKASGLGALMRELADIIGILHQDPEAFLQGDAAGNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417821192|ref|ZP_12467806.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419830317|ref|ZP_14353802.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419837569|ref|ZP_14361007.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421343906|ref|ZP_15794309.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421354512|ref|ZP_15804844.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422307789|ref|ZP_16394944.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422917697|ref|ZP_16952015.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423735520|ref|ZP_17708717.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423822603|ref|ZP_17716613.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423855994|ref|ZP_17720418.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423882868|ref|ZP_17724005.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423956069|ref|ZP_17734908.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|423985139|ref|ZP_17738457.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|423998127|ref|ZP_17741379.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424009862|ref|ZP_17752799.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424017020|ref|ZP_17756850.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424019945|ref|ZP_17759731.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424625311|ref|ZP_18063772.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424629797|ref|ZP_18068084.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424633841|ref|ZP_18071941.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424636921|ref|ZP_18074929.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424640833|ref|ZP_18078716.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424648900|ref|ZP_18086563.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443527820|ref|ZP_21093869.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|340038823|gb|EGQ99797.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|341636579|gb|EGS61273.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|395939986|gb|EJH50667.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395953637|gb|EJH64250.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408012740|gb|EKG50509.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408018373|gb|EKG55826.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408023551|gb|EKG60712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408024210|gb|EKG61335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408033180|gb|EKG69738.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408055353|gb|EKG90286.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408618993|gb|EKK92040.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408620090|gb|EKK93102.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408629831|gb|EKL02495.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408634579|gb|EKL06814.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640897|gb|EKL12679.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408640992|gb|EKL12773.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408657928|gb|EKL29003.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|408664537|gb|EKL35371.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|408852482|gb|EKL92304.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408856117|gb|EKL95812.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408860082|gb|EKL99733.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408863657|gb|EKM03131.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408867039|gb|EKM06401.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443453692|gb|ELT17510.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 459
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|300715706|ref|YP_003740509.1| cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 462
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/476 (46%), Positives = 304/476 (63%), Gaps = 24/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+++ LT+R I +D L+I PPD +P AT +I +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGETVEVLTNRMIGEMHKDFAALNILPPDQEPRATRHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++++ KLI AY +NG DV +SV + YG+LS + + ++ + + K+
Sbjct: 122 IEIVSKLIDREHAYVASNG----DVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQDVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSKANEP---SWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A++ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ ++ E +R F+
Sbjct: 235 HHENEIAQSTCAHEGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHFDAETVRCFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NY E L A+ +L RLY AI++ ++ E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYGEDNLKQARSALERLYTAIRNTDSSAEPAGGEVFE---TRFREAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S LFD+A +N+ K+ M A +LR L LGLLE + FL+N +
Sbjct: 352 NTPEAYSALFDMAREVNRLKAEDMSAANGLAAKLRQLAGVLGLLEQDPELFLQNGAQSND 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR+ KN+ +AD R +LV GI+LED P G T WRR
Sbjct: 412 DEVA-----EIEALIRQRLDARREKNWAQADMARDKLVAMGIVLEDGPQG-TSWRR 461
>gi|393762614|ref|ZP_10351241.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
gi|392606849|gb|EIW89733.1| cysteinyl-tRNA ligase [Alishewanella agri BL06]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 306/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K++F PITPGKV LYVCGIT YDYCH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ES LT+RF +A D L + P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+++L+ G AY +G DV + V + YG+LS + L E ++ K D
Sbjct: 122 ILMVQQLLDKGYAYIAKDG----DVLFDVSKYDAYGELSQQNLEMLQAGARVEVSDSKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +PY W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKTAKPGEPY---WQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ HK+VN W+H+G V+++ +KMSKS GNF T++++L +YN E +R+F+L
Sbjct: 235 HENEIAQSTCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
S YRS +NYS+ L A +L RLY A++DI +DLN + RF AM+DDFN
Sbjct: 295 SSQYRSQLNYSKENLEQAHAALGRLYNALRDITPATQ---VDLNNDYVARFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +N+ K+ + AK L+ L LG+L+ ++ FLK+ +
Sbjct: 352 TPEALPVLFELAREVNRFKTTEPAKAAELAAVLQTLAGVLGILQGDAEAFLKSGASDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+ AR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 -------GQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED-KNGVTSWRK 458
>gi|397169815|ref|ZP_10493244.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
gi|396088598|gb|EJI86179.1| cysteinyl-tRNA synthetase [Alishewanella aestuarii B11]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K++F PITPGKV LYVCGIT YDYCH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ES LT+RF +A D L + P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFKALGLLPADIEPTVTGHMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+++L+ G AY +G DV + V + YG LS + L E ++ K D
Sbjct: 122 ILMVQQLLDKGYAYIAKDG----DVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +PY W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKTAKPGEPY---WQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ HK+VN W+H+G V+++ +KMSKS GNF T++++L +YN E +R+F+L
Sbjct: 235 HENEIAQSTCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
S YRS +NYS+ L A +L RLY A++DI +DLN + RF AM+DDFN
Sbjct: 295 SSQYRSQLNYSKENLEQAHAALGRLYNALRDITPATQ---VDLNNDYVARFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +N+ K+ + AK L+ L LG+L+ ++ FLK+ +
Sbjct: 352 TPEALPVLFELAREVNRFKTTEPAKAAELAAVLQTLAGVLGILQGDAEAFLKSGASDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+ AR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 -------GQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED-KNGVTSWRK 458
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|417825068|ref|ZP_12471656.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|422909615|ref|ZP_16944258.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|422923151|ref|ZP_16956313.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429886116|ref|ZP_19367682.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|340046553|gb|EGR07483.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341634699|gb|EGS59448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341644386|gb|EGS68602.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429227010|gb|EKY33067.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|146307594|ref|YP_001188059.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
gi|187629851|sp|A4XVG1.1|SYC_PSEMY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145575795|gb|ABP85327.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
Length = 461
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K +F P+ +V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L + PD +P AT +I
Sbjct: 62 VTYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ +MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHQMIQTLIDKGYAYAPGNG----DVYYRVTRFETYGKLSRRKIDELKIGARIEVDEIKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E + +RF +AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAG----GEAYVERFGVAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + + A QL+ L + LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|188534564|ref|YP_001908361.1| cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|229558632|sp|B2VBD5.1|SYC_ERWT9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188029606|emb|CAO97484.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 462
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 302/477 (63%), Gaps = 26/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R FD+V R+LR + Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A++N ESI+ LT+R I +D L+I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRAQENGESIEQLTNRMIGEMHKDFAALNILPPDLEPRATRHITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++++EKLI AY +NG DV +SV + YG LS + + ++ + K+
Sbjct: 122 VELVEKLIAREHAYVASNG----DVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAADVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSKADEP---GWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F+
Sbjct: 235 HHENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLEHYDAETVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NY E LN A+ +L RLY+A+++ + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYGEDNLNQARSALERLYIALRN---TDTGATPAGGEEFETRFREAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S LFDLA +N+ K+ +A +LR LG LGLLE ++FL++
Sbjct: 352 NTPEAYSALFDLAREVNRMKAEAPAAADGLAARLRVLGGVLGLLEQDPEQFLQSG----- 406
Query: 416 KKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N N E I+ I R +AR KN+ +AD R L GI+LED G T WRR
Sbjct: 407 -ANSNDEEVAQIEALIQMRIDARNEKNWAQADVARDRLNEMGIVLEDGAGG-TRWRR 461
>gi|421351582|ref|ZP_15801947.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395952027|gb|EJH62641.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 459
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDIAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRAAKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 303/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 IELVEKLIQRGFAYVASNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDLTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +SI+ A L R L + +G+L + FLK +
Sbjct: 352 TPEAYSVLFEMARDINRIKTESIEKASALGALMRELADIIGILHQDPEAFLKGDAAGNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 304/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 VELVEKLIERGFAYVASNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDVTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +S++ A L R L + +G+L + FL+ +
Sbjct: 352 TPEAYSVLFEMAREINRIKTESVEKASALGALMRELADIIGILHQDPEAFLQGDAAGNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 298/477 (62%), Gaps = 25/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+++R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I P+ +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ + E LI G AY NG DV +SV +YGKLS + + S + + K
Sbjct: 122 INITETLIRRGHAYIAENG----DVMFSVSTDPDYGKLSRQDLEQLQSGDRVRTDVVDVK 177
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++ +DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL F
Sbjct: 178 RNSMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F
Sbjct: 235 PHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE L A+ +L RLY +++ K E RFI AM+DD
Sbjct: 295 LMSGHYRSQLNYSEENLKQARSALERLYTSLRGTDK---SVAPAGGEAFEARFIEAMDDD 351
Query: 361 FNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ KS+ MA+ LR L LGLLE + FL++ +
Sbjct: 352 FNTPEAYSVLFDMAREVNRLKSVDMAEANGMASHLRKLSGVLGLLEQEPEAFLQSGV--- 408
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K + +I+L I R +ARK KN+ AD R L GI+LED P G T WRR
Sbjct: 409 --KTGDAEVAEIELLIQQRLDARKAKNWSAADSARDRLNEMGIVLEDGPQGTT-WRR 462
>gi|398852262|ref|ZP_10608927.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM80]
gi|398244624|gb|EJN30168.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM80]
Length = 460
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPYDALTERMITAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPTVAPAG----GEAFVERFTTVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAA--RLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|375111151|ref|ZP_09757362.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|374568693|gb|EHR39865.1| cysteinyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
Length = 459
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K++F PITPGKV LYVCGIT YDYCH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIYNTLSRQKEVFTPITPGKVGLYVCGITIYDYCHVGHARTYVAFDVINRYLRFCGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ES LT+RF +A D L + P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENGESCDALTARFTQAMHADFNALGLLPADIEPTVTGHMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+++L+ G AY +G DV + V + YG LS + L E ++ K D
Sbjct: 122 ILMVQQLLDKGYAYIAKDG----DVLFDVSKYQAYGALSQQNLEMLQAGARVEVSDSKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +PY W S WG GRPGWHIECSAMS LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKTAKPGEPY---WQSPWGNGRPGWHIECSAMSAKHLGAHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ HK+VN W+H+G V+++ +KMSKS GNF T++++L +YN E +R+F+L
Sbjct: 235 HENEIAQSTCAHGHKYVNTWIHTGMVQVDKEKMSKSLGNFFTVKEVLAQYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
S YRS +NYS+ L A +L RLY A++DI +DLN + RF AM+DDFN
Sbjct: 295 SSQYRSQLNYSKENLEQAHAALGRLYNALRDITPATQ---VDLNNDYVTRFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +N+ K+ + AK L+ L LG+L+ ++ FLK+ +
Sbjct: 352 TPEALPVLFELAREVNRFKTTEPAKAAELAAVLQTLAGVLGILQGDAEAFLKSGASDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+ AR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 -------GQIEALIAKRNAARAAKDWAAADAARAELTALGIVLED-KNGVTSWRK 458
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 305/481 (63%), Gaps = 37/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F P+ PGK+ +YVCGIT YD CH+GH R + FD++ R+LR + Y+V
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES K+LT R I D L+++ PD++P AT ++P+I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ M+EKLI AY ++NG DV +SV +F YG+LSG+ I E + K+D
Sbjct: 122 IDMVEKLIEKEYAYVSDNG----DVLFSVSSFAEYGRLSGQNIEQLQAGARVEVEDTKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V I+ +KMSKS NF TIRD+LK Y+ IR+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAGTIRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EP-HAKRFII----A 356
HYRS +NYSE L AK +L RLY ++K +DLN EP A F++ A
Sbjct: 295 SGHYRSQLNYSEDNLKQAKSALDRLYTSLKG---------LDLNVEPADASEFVVKFKAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+ IN+ K +A+ +L+ L LGLL+ D F K
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRVKGSDLAQASAMGVKLKELAGVLGLLDQDVDIFFKG- 404
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + I+ I R+ AR K++ AD R L G+ILED P+G T WR
Sbjct: 405 ------EGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPSGTT-WR 457
Query: 471 R 471
+
Sbjct: 458 K 458
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/479 (47%), Positives = 306/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 TAIVEKLIQRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFRDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAGILGLLQLDPEQFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R L GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTEMGIVLEDGPNGTT-WRK 458
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 297/477 (62%), Gaps = 25/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+++R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTYTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I P+ +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPELEPRATHHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ + E LI G AY NG DV +SV YGKLS + + S + + K
Sbjct: 122 INITETLIRRGHAYIAENG----DVMFSVSTDPGYGKLSRQDLEQLQSGDRVRTDVVDVK 177
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++ +DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL F
Sbjct: 178 RNSMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKHLGHHFDIHGGGSDLMF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F
Sbjct: 235 PHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE L A+ +L RLY +++ K E RFI AM+DD
Sbjct: 295 LMSGHYRSQLNYSEENLKQARSALERLYTSLRGTDK---SVAPAGGEAFEARFIEAMDDD 351
Query: 361 FNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ KS+ MA+ LR L LGLLE + FL++ +
Sbjct: 352 FNTPEAYSVLFDMAREVNRLKSVDMAEANGMASHLRKLSGVLGLLEQEPEAFLQSGV--- 408
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K + +I+L I R +ARK KN+ AD R L GI+LED P G T WRR
Sbjct: 409 --KTGDAEVAEIELLIQQRLDARKAKNWSAADSARDRLNEMGIVLEDGPQGTT-WRR 462
>gi|384424847|ref|YP_005634205.1| cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 459
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|398791993|ref|ZP_10552691.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
gi|398214125|gb|EJN00708.1| cysteinyl-tRNA synthetase [Pantoea sp. YR343]
Length = 461
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/476 (46%), Positives = 303/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI G++ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGQIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYMGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I +D L I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANQNGESIETLTNRMIAEMHKDFAALGILPPDLEPRATRHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ LI AY +NG DV + V + +YG LS + L E + K++
Sbjct: 122 IELVGTLIERNHAYVADNG----DVMFDVLSDKDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P WNS WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEPA---WNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEVAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + E RF +AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDANATAAGGEEFEARFRLAMDDDFN 351
Query: 363 TPVAISILFDLANIIN------KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N K + +A +LR + N LG+L+ ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDKTSADALAAKLRQIANVLGILQQDPEQFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + RS+AR K++ +AD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNDDEVAEIEHWVKARSDARAAKDWAQADVARDKLNELGVIVEDGPQGSS-WRR 460
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 304/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 IELVEKLIQRGFAYVASNG----DVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDVTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +SI+ A L R L + +G+L + FL+ +
Sbjct: 352 TPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGDA-AGND 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IKL R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 411 DEVAEIEGLIKL----RNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 302/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + + K+
Sbjct: 122 IELVEKLIERGFAYVASNG----DVMFEVKKFDEYGKLSKQDLEQLQAGARVDVESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDLTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQLRGL----GNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +SI+ A L L + +G+L + FL+ +
Sbjct: 352 TPEAYSVLFEMAREINRIKTESIEKASGLGALMCELADIIGILHQDPEAFLQGDAAGNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKLRNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 304/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 NFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V+ F YGKLS + L + ++ K+
Sbjct: 122 IELVEKLIQRGFAYVASNG----DVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDSAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLR---GLDVTAAPAGGEEYVTRFSTAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A IN K +SI+ A L R L + +G+L + FL+ +
Sbjct: 352 TPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGDA-AGND 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IKL R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 411 DEVAEIEGLIKL----RNDSRASKDWANADLARDKLNELGIVLEDGPEGTT-WRR 460
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GK+ +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E LI G AY +NG DV + + + YGKLSG+ L E + K+
Sbjct: 122 IELVETLIERGFAYVADNG----DVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
LDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 SLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ +L RLY +++ + + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLNQARSALERLYTSLRGL-DLTVSAV--GGEEYVARFNDAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A +R L + +G+L + FLK + + +
Sbjct: 352 TPEAYSVLFDMAREINRLKAEDVAAASSLGVTMRQLADVIGILHQDPEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI+LED P G T WRR
Sbjct: 412 VA------EIEALIKLRNDSRASKDWANADMARDKLTEMGIVLEDGPEGTT-WRR 459
>gi|398923072|ref|ZP_10660460.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM48]
gi|398175781|gb|EJM63522.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM48]
Length = 460
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII A++N E LT R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIEDKIINRARENGEPFDALTERMITAMHEDEARLNILKPDMEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 LSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKATK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAE--VEALIAARLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/482 (48%), Positives = 314/482 (65%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WNVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ +K + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQKTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E ++ S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LSLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 304/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 TAIVEKLIQRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ + +
Sbjct: 352 TPNALSVLFEIARELNKLKTQDMAKANGLAARLRELAAILGLLQLDPEQFLQASSDEDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R L GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARVAKDWPAADAARNALTQMGIVLEDGPNGTT-WRK 458
>gi|378768199|ref|YP_005196670.1| cysteinyl-tRNA synthetase [Pantoea ananatis LMG 5342]
gi|386080338|ref|YP_005993863.1| cysteinyl-tRNA synthetase [Pantoea ananatis PA13]
gi|354989519|gb|AER33643.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis PA13]
gi|365187683|emb|CCF10633.1| Cysteinyl-tRNA synthetase [Pantoea ananatis LMG 5342]
Length = 461
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 306/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR +DV
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +IP+I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY NG DV + V + ++YG LS + L E + K++
Sbjct: 122 VELVEKLIARGHAYVAENG----DVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---SWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + + D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDRNAVADGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K M A +LR + N LG+L+ + FL+++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ + R++AR K++ +AD R +L G+I+ED P G + WRR
Sbjct: 412 EVA-----EIERWVKARADARAAKDWAQADVARDKLNALGVIVEDGPQGSS-WRR 460
>gi|429330373|ref|ZP_19211165.1| cysteinyl-tRNA synthetase [Pseudomonas putida CSV86]
gi|428764903|gb|EKX87026.1| cysteinyl-tRNA synthetase [Pseudomonas putida CSV86]
Length = 460
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/474 (48%), Positives = 297/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ S+ K++F P+ KV +YVCG+T YD+CHLGH R M+ FD+V RWLR + YD+
Sbjct: 2 LTIYNTLSKTKEVFKPLEGNKVRMYVCGMTVYDFCHLGHGRSMVAFDLVTRWLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N ES LT+R I A ED L+I PD +P AT++IP +
Sbjct: 62 TYVRNITDIDDKIINRANENGESFDALTARMIDAMHEDERRLNILKPDLEPRATDHIPGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + WMH G ++IN +KMSKS NF TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAASWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A++ +P + + E +RF AMNDDF
Sbjct: 295 SSHYRSAINYSEDSLRDAKGALERFYHALRGLPLVAPQG----GEEFVERFAAAMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + +A +LR LG LG+L+ +DEFL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDAQAAAGLAGRLRELGGLLGVLQLDADEFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR ++ G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIQARLQARADKNWAESDRIRDQITAMGVVLEDGKGGTT-WR 457
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYIADNG----DVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDIAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|407892682|ref|ZP_11151712.1| cysteinyl-tRNA ligase [Diplorickettsia massiliensis 20B]
Length = 470
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/488 (44%), Positives = 314/488 (64%), Gaps = 38/488 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +++K+ F P+ G+VSLYVCG+T YD CH+GHAR+++ FD++ R+L+ V
Sbjct: 2 LKIYNTLTQQKETFKPLIAGQVSLYVCGMTVYDLCHIGHARVLVAFDVIVRYLKNRGLSV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDIDDKII A++N+ESI LT+R I+A ED L++ PP +P AT I +I
Sbjct: 62 KYIRNITDIDDKIIQRAQENHESITELTTRMIEAMHEDFAQLNLMPPTQEPKATESIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
+++I+ L+ G+AYQ N D+ Y++ F YG L+ + + K+ +
Sbjct: 122 IQLIQILLDKGVAYQAENR----DIFYAIDTFKTYGALAHQ----DLEKLRHGSRVAVEL 173
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K N+P W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 174 NKQDPLDFVLWKAAKPNEP---SWESPWGPGRPGWHIECSAMSMAALGEQFDIHGGGLDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHH+NEIAQSE A KFV W+H GFV++N +KMSKS GNF T+RD+L +Y EV+R
Sbjct: 231 VFPHHQNEIAQSEAATDKKFVQTWIHVGFVQVNRQKMSKSLGNFFTLRDMLAEYPAEVVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI--------PKINYKKIIDLNEPHA 350
+F++ SHYRS I+YS+ L A+ +L RLY + ++ P+IN + L +
Sbjct: 291 YFLMASHYRSPIHYSQENLQLAQAALQRLYTTLFEVDNLGASGHPEINQDSLTTLLSSYE 350
Query: 351 KRFIIAMNDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSD 404
+ F AM+DDFNTP A+++LF + + I++ NK+I +A+ L+ LG+L+ +
Sbjct: 351 ESFQAAMDDDFNTPEALAVLFVMTHEIHRIKATDPNKAILIAQVLKKQATVLGILQQNPK 410
Query: 405 EFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPN 464
+FLK+ + + ++ ++ I+ I R +AR K++ AD IRQEL GI L+D P
Sbjct: 411 DFLKSGV-----QQIDSAK--IESLIQAREKARAGKDWKTADAIRQELEQMGIALKDTPQ 463
Query: 465 GKTEWRRI 472
G ++W R+
Sbjct: 464 G-SDWYRL 470
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVQRLIERGFAYVADNG----DVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---RVPAAGGEEYLSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS + +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGSAEDEEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 EQ-------IEALIKLRNDSRAVKDWANADMARDKLNEMGIVLEDCPNGTT-WRR 458
>gi|449144349|ref|ZP_21775164.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449079850|gb|EMB50769.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 459
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVQRLIERGFAYVADNG----DVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYLSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS + +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGSAEDEEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 EQ-------IEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDSPNGTT-WRR 458
>gi|421502280|ref|ZP_15949235.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
gi|400347127|gb|EJO95482.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
Length = 461
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 295/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K +F P+ +V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L + PD +P AT +I
Sbjct: 62 VTYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ +MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHQMIQTLIDKGYAYAPGNG----DVYYRVTKFETYGKLSRRKIDELKIGARIEVDEIKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E + +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAG----GETYVERFGAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + + A QL+ L + LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + K+VNYWMH GF+ +N +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEKYVNYWMHVGFINVNGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
NI + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 NI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 294/475 (61%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLEKEHAYVADNG----DVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVQRLIERGFAYVADNG----DVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYLSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS + +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGSAEDEEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 EQ-------IEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 436
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 290/457 (63%), Gaps = 34/457 (7%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YDYCHLGHAR+++ FD++ R+LR + YDV YVRNITDIDDKI+ A +N E
Sbjct: 1 MYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGYDVHYVRNITDIDDKILRRADENGEV 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
LT R IKA ED L + P +PCAT+YI I+ MI KL+ G AY +NG
Sbjct: 61 YSDLTQRMIKAMHEDEAKLGVLSPTEEPCATDYINDIVAMIHKLVSGGHAYAADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRW 202
DV +SV ++ +YGKLS + L++ + E K+ P DF LWK +K E+ W
Sbjct: 117 DVYFSVESYSDYGKLSKKKLEDLVAGARVDVQEA---KRSPADFVLWKAAKEG---EVSW 170
Query: 203 NSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYW 262
S WG GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQSE A H FVN W
Sbjct: 171 PSPWGDGRPGWHIECSAMSNRCLGETFDIHGGGPDLLFPHHENEIAQSECANGHTFVNTW 230
Query: 263 MHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKK 322
MH+G +++N +KMSKS GNF TIR++ +KY PEV+R+F++ SHYRS ++YSE L A +
Sbjct: 231 MHAGAIRVNKEKMSKSLGNFFTIREIFEKYAPEVVRYFLVSSHYRSQVDYSEDNLAEAGR 290
Query: 323 SLIRLYLAIKD-IPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN--- 378
+L RLY A++ +P N + H +RF AM+DDFNT A ++L +AN IN
Sbjct: 291 TLTRLYHALRGLVPAKNVAET-----EHDQRFAEAMDDDFNTAGATAVLHAVANEINLHR 345
Query: 379 ----KNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRS 434
K+ + A L LG LGLL+ + F + + E S +DI I R+
Sbjct: 346 REGRDEKANEQAAVLVRLGGVLGLLQQDPEAFFQADTGGE------LSADDIAAMIQARA 399
Query: 435 EARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ARK+K+F EAD+IR EL + G+IL+D G T WRR
Sbjct: 400 DARKQKDFAEADRIRDELADKGVILDDSREG-TSWRR 435
>gi|418292296|ref|ZP_12904242.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379063725|gb|EHY76468.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 461
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 297/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ S+ K+ F+P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLSKTKEAFHPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+
Sbjct: 122 MHTMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ + RF +AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKGALERFYNGLKGLPEATPGG----GDEFIARFGVAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDLAAAAALAARLKELAGVLGVLQLEPEAFLQAG----G 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR++L G++LED G T WR
Sbjct: 407 AGKVDATE--VEALIAARLTARAEKNWAESDRIREQLTAMGVVLEDGKGGTT-WR 458
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PI PGKV +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITDIDDKII A +N E TLT R I +D L+++ PD++P AT +I +I
Sbjct: 62 NFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E+L+ G AY +GDV +SV +F YG+LSG+ L E ++ K++
Sbjct: 122 IDMVERLLARGHAYV----AADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDDNKQN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V I+ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS INYSE L A+ +L RLY AIKD ++ E +F AM+DDFN
Sbjct: 295 SGHYRSQINYSEENLKQARAALERLYTAIKD---VDLTVAAAPAEEFVAKFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ IN+ K MA+ ++ L + LGLL S D F K
Sbjct: 352 TPEAYSVLFDMVREINRLKLTDMAEASALAVSMKQLADVLGLLHQSPDAFFKG------- 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G++LED P+G T WR+
Sbjct: 405 EGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLEDGPSGTT-WRK 458
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 294/475 (61%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLDKEHAYVADNG----DVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-STGKTSWRR 457
>gi|398906751|ref|ZP_10653593.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM50]
gi|398172518|gb|EJM60379.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM50]
Length = 460
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 294/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 QSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
Length = 464
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/476 (45%), Positives = 298/476 (62%), Gaps = 22/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ S+KK+ F PI PGKV LYVCG+T YDYCHLGHAR+++ FD++ R+LR + +DV
Sbjct: 2 IRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R I A ED L + P+ +P AT +I +
Sbjct: 62 NYVRNITDIDDKILRRADENGEVYTCLTERMIAAMHEDEARLGVLSPNAEPRATAFISDM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MIE LI G AY +NG DV + V +F +YGKLS + + + K+
Sbjct: 122 IAMIETLIAGGHAYAADNG----DVYFLVSSFADYGKLSKKKLEDLLAGARVDVEQAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DFALWK +K P E+ W S WG GRPGWHIECSAM+ + LG FDIHGGG DL FPH
Sbjct: 178 PADFALWKAAK---PDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDIHGGGPDLLFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A H FVN WMH+G +++N +KMSKS GNF TIR++++ Y EV+R+F++
Sbjct: 235 HENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMETYPAEVVRYFLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS ++YSE L + +SL +LY A++ + + + H F+ M+DDFN
Sbjct: 295 SSHYRSQVDYSEDNLIESGRSLTKLYNALRGVTPLASDAVA--RTAHDTLFVKRMDDDFN 352
Query: 363 TPVAISILFDLANIINKNK-------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
A++ L LA +N+ + + A L LG+ LGLL+ + F + ++
Sbjct: 353 CAGAMATLHALAGEMNQQRRDGDEQAAAASATVLVRLGSVLGLLQQDPELFFQ----SDS 408
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S I+ I R++ARK ++F AD+IR EL+ G+IL+D G T WRR
Sbjct: 409 GQGNELSAGQIETMIQSRADARKTRDFAGADQIRDELLARGVILDDSREG-TSWRR 463
>gi|424659553|ref|ZP_18096802.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408052108|gb|EKG87167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 459
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 297/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENEETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEDYVTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS M +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 AQ-------IEALIKLRNDSRAAKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 465
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 302/479 (63%), Gaps = 27/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P+ GKVS+YVCG+T YD CH+GHAR FD++ R+L+ + YDV
Sbjct: 2 LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT RFI+ +D + +Q PD +P AT + +I
Sbjct: 62 TYVRNITDIDDKIINRANENGEDFSELTERFIQEMYQDFDAIGLQRPDIEPRATQTMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M + LI G AY +NG DV + V F +YGKLS + L N + + N+ KKD
Sbjct: 122 IQMTQTLIEKGAAYATDNG----DVYFHVPAFKDYGKLSKQDLTQLNAGERVDVNDIKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK SK P E W+S WG GRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 PMDFALWKSSK---PGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A F W+H+G V+++ +KMSKS GNF TIRD+LK+Y PE +R+F++
Sbjct: 235 HENEIAQSECANDCTFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVLKQYRPESVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID----LNEPHAKRFIIAMN 358
HYRS ++Y++ L A SL RLY +++ +++ + D + E RF AM+
Sbjct: 295 SGHYRSQLSYTQANLESADASLERLYTSLR---GVDFNRATDDKLGILEQAQLRFTEAMD 351
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFN P A+ +LFDLA +N+ K+ MA +++ L L LL+ + FLK+
Sbjct: 352 DDFNVPEAMPVLFDLAKEVNRLKATDMATAATIAVKIKELAGVLSLLQQDPESFLKSG-- 409
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + S+ DI I R +AR KN+ AD+IR +L I LED G T WRR
Sbjct: 410 ---AGDSDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAMNIELEDAAGG-TSWRR 464
>gi|330503048|ref|YP_004379917.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
gi|328917334|gb|AEB58165.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
Length = 461
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 293/475 (61%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ S+ K+ F P+ V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT +I
Sbjct: 62 VTYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEARLNVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ +MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHQMIQTLIDKGFAYAPGNG----DVYYRVTKFETYGKLSRRKIDELKIGARIEVDEIKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKAAKPGEP---SWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAG----GEAFVERFGSAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A QL+ L + LG+L+ D FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDLQAAAGLAAQLKQLASVLGVLQLEPDAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 294/475 (61%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLDKEHAYVADNG----DVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L ++ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAG----GEEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 309/475 (65%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A KN ES L R + +D +L++ PD +P AT++I +I
Sbjct: 62 TYVRNITDVDDKIIKRALKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY ++NG DV ++V +F YGKLS + L E + KK+
Sbjct: 122 ITLVEKLIQRGHAYVSSNG----DVMFNVESFKEYGKLSRQNLEQLQAGARVEIVHIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ +LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYWMHSG + ++ +KMSKS GNF T+RD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNIYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K I E + F AMNDDFN
Sbjct: 295 NAHYRSPLNYSEENLNLAHTALERLYTALRGTDK---SAIACGGENYINAFKEAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ +A +LR L + LGLL +EFL++ + E
Sbjct: 352 TPNAVSVLFEIAREVNKLKNEDMEKANSLAARLRELADILGLLYQDPEEFLQSGLDDEEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K + E+ IK R+EAR K++ AD R++L ++LED NG T WR+
Sbjct: 412 KLI---ESLIKQ----RNEARAAKDWATADAAREQLSKMKVVLEDGANGTT-WRK 458
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/485 (47%), Positives = 307/485 (63%), Gaps = 26/485 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MS L +YN+ +R K+ F PI ++ LYVCGIT YDYCH+GHAR MI FD++ R+LR
Sbjct: 1 MSDLYVYNAETRSKEHFEPIVANEIKLYVCGITVYDYCHIGHARTMIAFDLIVRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A+ N+ESI LT RFI+A ED L PD +P AT+ I
Sbjct: 61 WKVKYIRNITDIDDKIIHKAQDNHESIGELTDRFIQAMHEDFQTLGCLSPDAEPKATDSI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
I ++I+ LI AYQ NGD+ +S+ ++ +YG+LSGR ++ +++ +
Sbjct: 121 QDIQRIIQTLIEKKYAYQ----IANGDIYFSIESYPDYGRLSGRKLADMQAGASQRVSLE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K P DF LWK SK N+P+ W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 TEKHHPFDFVLWKASKPNEPF---WQSPWGNGRPGWHIECSAMSMCHLGNHFDIHGGGGD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A K+VNYW+H+GF+ +N +KMSKS GNF TIRD K Y+PEVI
Sbjct: 234 LIFPHHENEIAQSEAATGEKYVNYWLHTGFINVNGEKMSKSLGNFLTIRDAFKSYHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKK---IIDLNE-PHAKR 352
R ++ SHYRS I++S+ L +K L R Y AI P I K +LN P ++
Sbjct: 294 RLLMMSSHYRSPIDFSDHILKDTQKVLSRFYQAIYHAQPFIASKDDAIKTELNSNPFIQK 353
Query: 353 FIIAMNDDFNTPVAISILFDLANIIN-------KNKSIKMAKQLRGLGNWLGLLEYSSDE 405
F AMNDDFNTP A+ I FDL +N K IK + L +GN L + +Y ++
Sbjct: 354 FNQAMNDDFNTPEALVICFDLLKQLNIALKEESPEKVIKNYQLLLWIGNILNIFQYDPEK 413
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
LK ++ +++ SE +I+ I R+ AR K + AD+IRQ+L+ +GI+LED
Sbjct: 414 ILK---HSASEQDSPLSEQEIQEAILARNTARSNKQYALADQIRQKLLQSGILLEDT-QT 469
Query: 466 KTEWR 470
+T WR
Sbjct: 470 QTIWR 474
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 309/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVTKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD++ K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMDKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 312/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WNVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
Length = 459
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N+E+ ++LT R I+ D L+I+ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENSETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVERLIERGFAYVADNG----DVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E IR+F++
Sbjct: 235 HENEIAQSCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDRTVPAA---GGEEYLTRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS + + L + +G+L + F + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDLTNASALGSLMCELADVIGILYQEPEAFFQGGAEDEEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 EQ-------IEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 295/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K+ F P+ KV +YVCG+T YD+CH+GHAR+MI FD+V RWLR YD
Sbjct: 2 ALSIYNTLTKTKEAFRPLEDNKVRMYVCGMTVYDFCHIGHARVMIAFDVVTRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDIEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+
Sbjct: 122 MHTMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKQ 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ + RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAG----GDEFVARFAAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L + LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDLPAAAALAARLKELADVLGVLQLEPETFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDATE--VEALIAARLTARAEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|337754352|ref|YP_004646863.1| cysteinyl-tRNA synthetase [Francisella sp. TX077308]
gi|336445957|gb|AEI35263.1| Cysteinyl-tRNA synthetase [Francisella sp. TX077308]
Length = 459
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/476 (48%), Positives = 308/476 (64%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S KK+ F PI P K+ +Y CG+T YD CH+GHAR I FD++ R+ + +DVT+V
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGFDVTFV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII AK+N+ES L R IKA E L+I P ++P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRAKENSESTTELVDRNIKAMHEVFDKLNILKPSFEPKATETIPEMIAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE L+ G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLVEKGFAYQG----ANGDVFYRVAEFADYGKLSKQNLEALEQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK +K +P W S WGAGRPGWHIECSAMS +LG+ FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKKAKEGEP---AWESPWGAGRPGWHIECSAMSKKILGNTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENE+AQSE K+VNYW+HSG VK+N +KMSKS NF TI+++L++Y+PEVIR+F+
Sbjct: 233 HHENEVAQSEACNDCKYVNYWLHSGMVKVNAEKMSKSLNNFFTIKEVLQEYHPEVIRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L+ AK S+ RL+ A++DI + D NE + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLDNAKASVERLFNALRDIEPVEINLPDDANE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L ++++ K +
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAFLLRKLCDVLGILFTDTEDYFK------Q 405
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ SE I+ I R++A+K KN+ AD+IR EL N GIILED G T W++
Sbjct: 406 GDGVDASE--IEKLIAERAQAKKDKNYARADEIRNELHNQGIILEDSATGTT-WKK 458
>gi|398935973|ref|ZP_10666758.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM41(2012)]
gi|398168809|gb|EJM56811.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM41(2012)]
Length = 460
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 294/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 QTMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ N + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAA--RLAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|377579972|ref|ZP_09808928.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377538721|dbj|GAB54093.1| cysteinyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 461
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 305/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I PD +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDNEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV ++V +YG+LS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVASNG----DVMFAVDTDASYGQLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+PE IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDPETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY+A++ +N + E RF+ AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYIALRGT-DVNAQAA--GGEAFEARFVEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS+ ++A LR L LGLLE+ ++FL+N +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSVDKGAADQLASHLRKLAGVLGLLEHDPEQFLQNGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVTKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATMLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/476 (48%), Positives = 302/476 (63%), Gaps = 29/476 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SRKK+ F PI G++ +YVCG+T YD CH+GHAR + FD+V R+LR Y V
Sbjct: 15 LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGYKV 74
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDIDDKII A + S K L FI +D L+I PD +P AT IP+I
Sbjct: 75 RYIRNITDIDDKIIKRAHERKVSAKELAENFIVEMHKDFDALNIMRPDEEPRATETIPEI 134
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI NG AY +NG DV +++ F YG+LSG+ L E K++
Sbjct: 135 IALVQRLIDNGNAYVADNG----DVMFAIDTFKQYGRLSGQNLEELEAGARIEIEKTKRN 190
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG +FDIHGGG DL FPH
Sbjct: 191 PFDFVLWKMSK---PGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFPH 247
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A K+VNYWMHSG V IN++KMSKS NF TIRD+L+ Y+ E IRFF+L
Sbjct: 248 HENEIAQSCCACHSKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLEHYDAETIRFFLL 307
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS +NY++ L+ AK SL RLY A++D+ + + + + KRF M+DDFN
Sbjct: 308 SAQYRSPLNYTQENLDKAKASLARLYTALRDVVPVKAEG----EDEYTKRFKELMDDDFN 363
Query: 363 TPVAISILFDLANIINKNKS---IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
TP A+++LFDLA +NK + K+A +L LG+ LG+L + FLK
Sbjct: 364 TPGAMAVLFDLAKAVNKEEGETKAKLAGRLVELGSVLGILYQNPSSFLKG---------A 414
Query: 420 NYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R +AR RK+F AD R +L GI+LED P+G T WRR
Sbjct: 415 ESSDNDEVSVIEALIQERKDARARKDFKAADAARDKLTAMGIVLEDGPSGTT-WRR 469
>gi|407789635|ref|ZP_11136735.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
gi|407206295|gb|EKE76253.1| cysteinyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
Length = 457
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 303/475 (63%), Gaps = 27/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ SR+K+ F P+ PGKVSLYVCGIT YD H+GHAR + FD++ R+LR YDV
Sbjct: 2 LKVFNTLSREKETFQPLVPGKVSLYVCGITIYDLMHIGHARTYVAFDVINRYLRHKGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ES + LT RF +ED L+ PPD +P T ++ I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCEALTERFATLMREDFAALNTLPPDIEPKVTTHMDDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M++ L+ G AYQ +NG DV + V++F YG+LS + L + + + K+D
Sbjct: 122 IQMVKALVDRGHAYQADNG----DVLFEVKSFEQYGQLSRQDLDALQAGARVDVEDAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E +W S WG GRPGWHIECSAMS LG FDIHGGG DL FPH
Sbjct: 178 PLDFVLWKQAK---PGEPKWASPWGEGRPGWHIECSAMSSRHLGPVFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +F YW+HSG V++N +KMSKS GNF T+RD+LK ++ E +R+F+L
Sbjct: 235 HENEIAQSCCASGQQFARYWLHSGMVQVNKEKMSKSLGNFFTVRDVLKVFDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYSE LN AK +L RLY A+K + +L A RF AM+DDFN
Sbjct: 295 TSHYRSQLNYSEDNLNQAKAALERLYTALKGV-----SAEAELAGDWAARFDAAMDDDFN 349
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +NK K +A L+ LG LG+++ + + FL+ +
Sbjct: 350 TPEALVVLFELARELNKAKQEGRADVASLAATLKHLGGLLGVVQQAPEAFLQGG---DED 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V + E I R++AR+ +++ AD R L G++LED P G T WR+
Sbjct: 407 LDVAHIEG----LIAKRNQARQDRDWAAADAARDALTALGVVLEDGPQG-TSWRK 456
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 296/476 (62%), Gaps = 23/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT R I D L+I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIGEMHADFAALNILPPDSEPRATQHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ +++ LI AY +NG DV + V + +YG LS + + ++ + N K+
Sbjct: 122 IDIVQTLIDRDHAYVASNG----DVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSK---PGEPSWTSPWGKGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VN WMHSG V I+ +KMSKS NF T+RD+LK Y+ E +R+F+
Sbjct: 235 HHENEIAQSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NYSE L A+ S+ RLY A++ + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYSEENLKLARTSMERLYTALR---GTDAAATPAGGEAFVTRFRAAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S+LFD+A IN+ K+ + A +LR L LGLLE ++FLK+ +
Sbjct: 352 NTPEAYSVLFDMARDINRLKTEDLSAANGLAAELRQLAGVLGLLEQDPEQFLKSGAQADN 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V +I+ I R++AR K++ ADK R L GI+LED P G T WRR
Sbjct: 412 DDEVA----EIEALIKQRNDARASKDWGMADKARDRLNEMGIVLEDGPAGTT-WRR 462
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVTKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|398838299|ref|ZP_10595579.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM102]
gi|398116381|gb|EJM06145.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM102]
Length = 460
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 294/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LTIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 QSMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPNVAPVG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D ++ R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIQA--RLTARANKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWTAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 309/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WSVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGSAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL+++ D FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHDVDAFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 303/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L++Q PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPHATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY +NG DV +SV + +YG LS + L E + K++
Sbjct: 122 IELTERLIARNHAYVADNG----DVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ M A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQTDDDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + K+VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 296/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES++ LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY +NG DV + V+ NYG LS + L E + K++
Sbjct: 122 IELTESLIERGHAYVADNG----DVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A++ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHEGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY +++ K E RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTSLRGTDK---SVAPAGGEAFKARFCEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ MA QLR L LGLLE + FL+ E
Sbjct: 352 TPEAYSVLFDIAREINRLKTEDMAAANGMAAQLRELAKVLGLLEQEPEAFLQGGAQGEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R++AR+ K++ AD+ R L G++LED G T WRR
Sbjct: 412 AEVAKIEALIKQ----RNDARQSKDWALADQARDALTAMGVVLEDSSAGTT-WRR 461
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|424807047|ref|ZP_18232455.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|342324989|gb|EGU20769.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 459
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ ++LT R I+ D L+I+ PD P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVGPRATAYIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V + YGKLS + L + K+
Sbjct: 122 IALVQRLIERGFAYVADNG----DVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEAAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY A++ + + E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYNALRGLDR---SVPAAGGEEYLSRFTAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS + +R L + +G+L + F + + E
Sbjct: 352 TPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGSAEDEEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+++R K++ AD R +L GI+LED PNG T WRR
Sbjct: 412 EQ-------IEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPNGTT-WRR 458
>gi|345429845|ref|YP_004822963.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 459
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 311/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K++F PI GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIARGHAYVADNG----DVMFDVESFKEYGKLSRQDLDQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVALGGENFVEAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR L LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDAEKANGLAARLRELAGILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|399520526|ref|ZP_10761302.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111967|emb|CCH37861.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 461
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 292/475 (61%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ S+ K+ F P+ V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLSKAKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L + PD +P AT +I
Sbjct: 62 VTYVRNITDIDDKIIRRANENGEPFEALVERMIAAMHEDEARLSVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ +MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+
Sbjct: 122 MHQMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGVKPGEP---SWQSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAG----GEAFVERFGAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + + A QL+ L + LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D I R +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAEVDT--LIAARLQARAEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES++ LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY +NG DV + V+ NYG LS + L E + K++
Sbjct: 122 IELTESLIERGHAYVADNG----DVMFEVKTDPNYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ K E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALRGTDK---SATPAGGEIYKSRFCEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFD+A +N+ K+ M A QLR L LGLLE + FL+ +E
Sbjct: 352 TPEAYSALFDMARELNRLKTENMDAANGMAAQLRELAKVLGLLEQDPETFLQGGAQSEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R++AR+ K++ AD+ R L GI+LED G T WRR
Sbjct: 412 AEVAKIEALIKQ----RNDARQSKDWALADQARDALTAMGIVLEDSSAGTT-WRR 461
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 294/475 (61%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDELTERLIGDMHADFDALGMVRPDIEPRATQHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLEKEHAYVADNG----DVMFIVESYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K+ M +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKAEDMVVAAALGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCG+T YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N E+ LT R + +D L+I PD +P AT++IP+I
Sbjct: 62 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV ++V +YG LS + L E + K++
Sbjct: 122 IEIVEQLITRGHAYVASNG----DVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ D+ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTEPQAEPAGGDVFE---ARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ KS MA+ +LR L LGLLE + FL+ +
Sbjct: 352 TPEAYSALFDLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQGGAQADDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVAQ-----IEALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGPQGTT-WRR 460
>gi|406903893|gb|EKD45834.1| hypothetical protein ACD_69C00115G0004 [uncultured bacterium]
Length = 468
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/472 (48%), Positives = 303/472 (64%), Gaps = 26/472 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IYN+ +++K++ PI P K+ LYVCG+T YD CH+GH RL I FD++ R+LR Y V
Sbjct: 2 IHIYNTLTKRKELLKPIDPPKIGLYVCGLTVYDDCHIGHGRLFIWFDVLTRYLRSVGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+YVRNITDIDDKII A++ N K LT + I + D LL PPD++P T++IP+I
Sbjct: 62 SYVRNITDIDDKIIKRAQELNIDYKELTKQVIASMHADEKLLGNIPPDFEPRVTDHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MI+ LI AY G DV YSV F YG+LS + I I E + K+D
Sbjct: 122 IDMIQTLIDKNFAYPTKGG----DVYYSVAKFKKYGELSHKDIGGLLLGIRVEVSEDKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K+ +P+ W S WG GRPGWHIECSAM+ LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKAAKSKEPF---WPSPWGNGRPGWHIECSAMAKKYLGKTFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
H+NE+AQSE A FVNYWMH GFV+ N +KMSKS GNF T++++LKKYNPEV+R+F++
Sbjct: 235 HQNELAQSEAANDCPFVNYWMHIGFVQSNQEKMSKSLGNFFTLKEVLKKYNPEVLRYFVV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYS+ L+ A+ +L R Y++++ +P + + K F AM DDFN
Sbjct: 295 ISHYRSQINYSQENLDNAQSALQRFYISMRSLP-TEKNITFETDNQFYKNFHAAMQDDFN 353
Query: 363 TPVAISILFDLANIINK----NKSIKMAKQ---LRGLGNWLGLLEYSSDEFLKNNIYTER 415
TP AI+ILFDLA IN+ ++ +K Q L+ LG LG+L+ + + FLK + E+
Sbjct: 354 TPKAIAILFDLAREINQLRDSSQELKAQNQCALLKHLGWSLGILQENPETFLKFGVNIEK 413
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I+ I R++AR+ KN+ EADKIR EL GI LED G T
Sbjct: 414 ----------IETLIAARNQARQNKNWHEADKIRAELTTMGITLEDTGAGTT 455
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 303/475 (63%), Gaps = 21/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR + Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ LTSR + +D L+++ PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENNETCDQLTSRMLAEMHKDFDALNLERPDLEPHATHHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++++LI AY NGDV ++V + +YG LS + L E + K++
Sbjct: 122 IQLVQRLIERDHAYV----AANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ ++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GMDTNAVAAGGEEFEARFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K M A +LR L + LGLL ++FL+++ T+
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANGLAAELRKLAHVLGLLAQDPEQFLQSSAQTDVD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N ++I+ I R++AR K++ AD R L GI+LED P G T WRR
Sbjct: 412 NN---EVSEIEALIKQRNDARSSKDWALADSARDRLNEMGIVLEDSPQG-TIWRR 462
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI PG V +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +N+ES LTSR + +D L+I PD +P AT +IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENHESCDDLTSRMLAEMYKDFDALNILRPDLEPRATRHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+++ E LI G AY +NG DV +SV + +YG LS + +S E + K++
Sbjct: 122 IELTESLIKRGHAYVADNG----DVMFSVESDSDYGALSRQDLSQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+LK Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLKYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ + E RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALR---GTDASVSPAGGEVFEARFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN KS + A LR L LGLLE ++FL + + + +
Sbjct: 352 TPEAYSVLFDMAREINCLKSEDLSAANGLAAVLRKLAGILGLLEQDPEQFLHSGVQVDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R++ARK K++ AD R +L GI LED P G T WRR
Sbjct: 412 DIAK-----IEALIKQRNDARKNKDWTLADSARDQLNEMGIELEDGPQG-TSWRR 460
>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 465
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 297/481 (61%), Gaps = 31/481 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 4 SMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGY 63
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
++ YVRNITDIDDKII A +N ES L R I D L+IQ PD +P AT++I
Sbjct: 64 NLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNIQRPDSEPRATHHIH 123
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+ + EKLI G AY +NG DV +SV YG+LS + L + + K
Sbjct: 124 EIIDITEKLIERGHAYVADNG----DVMFSVPTDPTYGQLSRQDLEQLQAGARVDVVDVK 179
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL F
Sbjct: 180 RNPMDFVLWKMSKAGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMF 236
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F
Sbjct: 237 PHHENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYF 296
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAI----KDIPKINYKKIIDLNEPHAKRFIIA 356
++ HYRS +NYSE L A+ +L RLY A+ K +P E RF+
Sbjct: 297 LMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVPAAG-------GEAFEARFVEV 349
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 350 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFLQSG 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WR
Sbjct: 410 AQADEGEVA-----EIEQLIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WR 463
Query: 471 R 471
R
Sbjct: 464 R 464
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEV---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/482 (48%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKKNEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + K+VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A++ILF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAILFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YDV
Sbjct: 2 LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES++ LT+R + +D L+I PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVEELTTRMLAEMHKDFDALNILRPDSEPRATRHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY +NG DV + V+ +YG LS + L E + K++
Sbjct: 122 IELTESLIERGHAYVADNG----DVMFEVKTDPSYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ K E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALRGTDK---SATPAGGEIYKSRFCEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFD+A +N+ K+ MA QLR L LGLLE + FL+ +E
Sbjct: 352 TPEAYSALFDMARELNRLKTENMDAANGMAAQLRELAKVLGLLEQDPETFLQGGAQSEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R++AR+ K++ AD+ R L GI+LED G T WRR
Sbjct: 412 AEVAKIEALIKQ----RNDARQSKDWALADQARDALTAMGIVLEDSSAGTT-WRR 461
>gi|386014979|ref|YP_005933256.1| cysteinyl-tRNA synthetase [Pantoea ananatis AJ13355]
gi|327393038|dbj|BAK10460.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis AJ13355]
Length = 461
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 305/475 (64%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR +DV
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +IP+I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY NG DV + V + ++YG LS + L E + K++
Sbjct: 122 VELVEKLIARGHAYVAENG----DVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---SWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDRNAVAHGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K M A +LR + N LG+L+ + FL+++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ + R++AR K++ +AD R +L G+I+ED P G + WRR
Sbjct: 412 EVA-----EIERWVKARADARAAKDWAQADVARDKLNALGVIVEDGPQGSS-WRR 460
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 311/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WNVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCAAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGSAYP----AANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQMYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L++ G++LED G T W
Sbjct: 414 DIGQEA---LTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|336123884|ref|YP_004565932.1| cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
gi|335341607|gb|AEH32890.1| Cysteinyl-tRNA synthetase [Vibrio anguillarum 775]
Length = 460
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 300/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IGLVQRLIERGFAYVASNG----DVMFEVNKFDEYGKLSKQDLDQLQAGARIDVDLAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ ++ + E + RF IAMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARASLERLYTALR---GLDLTVAVAGGEEYVSRFSIAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A INK K+ + + +R L + +G+L + FLK +
Sbjct: 352 TPEAYSVLFDMARDINKLKTENLQQASALGALMRELADVIGILHQDPEAFLKGD------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N + +I+ I R+++R K++ AD R +L GIILED P+G T WRR
Sbjct: 406 ANGDEQVAEIEALIKLRNDSRAAKDWANADVARDKLNELGIILEDGPSGTT-WRR 459
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 296/476 (62%), Gaps = 23/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT R I D L+I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETFMALTDRMIAEMHADFASLNILPPDSEPRATQHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ +++KLI AY +NG DV + V + +YG LS + + ++ + N K+
Sbjct: 122 IDIVQKLIDRDHAYVASNG----DVMFWVESDPDYGLLSRQDLDQLQAGARVEVEANVKR 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FP
Sbjct: 178 NPMDFVLWKMSK---PGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS A+ +VN WMHSG V I+ +KMSKS NF T+RD+LK Y+ E +R+F+
Sbjct: 235 HHENEIAQSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ HYRS +NYSE L A+ S+ RLY A++ + E RF AM+DDF
Sbjct: 295 MSGHYRSQLNYSEENLKLARTSMERLYTALR---GTDAAATPAGGEAFVTRFRAAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S+LFD+A IN+ K+ +A +LR L LGLLE ++FLK+ +
Sbjct: 352 NTPEAYSVLFDMARDINRLKTEDLSAANGLAAELRQLAGVLGLLEQDPEQFLKSGAQADN 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V +I+ I R++AR K++ ADK R L GI+LED G T WRR
Sbjct: 412 DDEV----AEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLEDGAAGTT-WRR 462
>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
Length = 466
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/477 (46%), Positives = 315/477 (66%), Gaps = 22/477 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ ++KK+ F P+ KV +YVCG+T YD+CH+GHAR+++VFD++ R+L++ Y V
Sbjct: 2 LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDIDDKII A++NNES LT R IKA ED L+ PP+ +P AT+ I I
Sbjct: 62 NYIRNITDIDDKIIKRAQENNESPFELTQRMIKAMHEDFNRLNTLPPNAEPKATDAIVYI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF-KKD 182
+ +I++L+ AY++ NG D+ + V+ F YG L+ + + + + KKD
Sbjct: 122 IALIQRLVDKAYAYRSENG----DICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDITKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K+ +P W S WG GRPGWHIECSAMS LG HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKKAKSGEP---SWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
H+NEIAQSEG KFVN W+H GFV+I+ +KMSKS GNF T+RD+LK+Y EV+R+F++
Sbjct: 235 HQNEIAQSEGVTDKKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVLKQYPAEVVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKII--DLNEPHAKRFIIAMNDD 360
SHYRS I YS L A+ +L RLY +++ + +K + + ++ + ++F AMNDD
Sbjct: 295 SSHYRSPIQYSLENLQAAQAALQRLYTSLRGLVGKGPQKFVLEESSKEYQEKFEHAMNDD 354
Query: 361 FNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A++ILF+LA IN+ + + A L+ L + LG+L+ ++FLK N
Sbjct: 355 FNTPDALAILFELARRINRLRETNSKHAQRDANCLQYLASLLGILQQEPEQFLKLN---- 410
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++K+ + E I + R+ AR KN+ EAD+IR EL+ I+LED G T+WRR
Sbjct: 411 QEKDPHLVEK-INGLMNARNHARAAKNWQEADRIRDELLALNIVLEDTTTG-TQWRR 465
>gi|365969337|ref|YP_004950898.1| cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365748250|gb|AEW72477.1| Cysteinyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 465
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/481 (48%), Positives = 298/481 (61%), Gaps = 31/481 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 4 SMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGY 63
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
++ YVRNITDIDDKII A +N ES L R I +D L+IQ PD +P AT++I
Sbjct: 64 NLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNIQRPDSEPRATHHIH 123
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+ + EKLI G AY +NG DV +SV YG+LS + L + + K
Sbjct: 124 EIIDITEKLIERGHAYVADNG----DVMFSVPTDPTYGQLSRQDLDQLQAGARVDVVDVK 179
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL F
Sbjct: 180 RNPMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMF 236
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F
Sbjct: 237 PHHENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYF 296
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAI----KDIPKINYKKIIDLNEPHAKRFIIA 356
++ HYRS +NYSE L A+ +L RLY A+ K +P E RFI
Sbjct: 297 LMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVPAAG-------GEAFEARFIDV 349
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 350 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDLFLQSG 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WR
Sbjct: 410 AQADDSEVA-----EIEQLINARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WR 463
Query: 471 R 471
R
Sbjct: 464 R 464
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|163857764|ref|YP_001632062.1| cysteinyl-tRNA synthetase [Bordetella petrii DSM 12804]
gi|163261492|emb|CAP43794.1| cysS [Bordetella petrii]
Length = 516
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/490 (45%), Positives = 305/490 (62%), Gaps = 28/490 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P PG+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 32 LHIYNTLSRTKEPFKPAQPGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLKV 91
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+ ++
Sbjct: 92 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVGEM 151
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L +I +L NGLAY+ + +GDVNY+VR F YGKLSG+ + + + K+D
Sbjct: 152 LDIIGRLEQNGLAYRAD----DGDVNYAVRGFDGYGKLSGKALDDLRAGERVAVGSAKRD 207
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K ++P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKFPH
Sbjct: 208 PLDFVLWKAAKADEPDDTKWQSPYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDLKFPH 267
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK----------- 291
HENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 268 HENEIAQTEGAFGGVLANTWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGEAPADQAEYA 327
Query: 292 YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+ ++ + +D NEP
Sbjct: 328 VNPREAEMLRFFIVRNHYRSPQNYTPHNLADAQSALDRLYQALLNVAPDDAG--LDWNEP 385
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
A+ F AM+DDFNT A++ LF+LA+ N+ +S + A QL+ L LGLL+ + +
Sbjct: 386 QAQAFKAAMDDDFNTSGAVAALFELASEANRTRSARSAGQLKSLAALLGLLQQDPARYFQ 445
Query: 409 -------NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ + + I+ I R+ A++ +++ EAD+IR +L GI L+D
Sbjct: 446 CATRYSAAGLAQAATPSASLDAGQIETLIAARAAAKQARDYAEADRIRAQLREAGIELDD 505
Query: 462 MPNGKTEWRR 471
P G+T+WRR
Sbjct: 506 KPGGQTQWRR 515
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/478 (47%), Positives = 313/478 (65%), Gaps = 29/478 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F P+ PGKV +YVCGIT YDYCH+GH R + FD V R+LR + Y +
Sbjct: 2 LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITD+DDKII A +NNES LTSRF +A +D L + PD +P T+++P++
Sbjct: 62 NYIRNITDVDDKIIKRAAENNESCDQLTSRFTEAMHQDFDALFMLRPDLEPRVTDHMPEV 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
++MI+KLI G AY N DV ++V +F YG+LSG+ L + + ++ E
Sbjct: 122 IEMIKKLIAKGHAYVAENN----DVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEES--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++PLDF LWK++K +P+ W S WG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 175 KRNPLDFVLWKMAKPAEPF---WTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLA 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A+ ++VN WMHSG V+++ KMSKS NF TI+++LK ++ E +R+
Sbjct: 232 FPHHENEIAQSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLKFFDSESVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F++ HYRS +NYSE L A+ SL RLY +++D+ + +D H ++FI AM+D
Sbjct: 292 FLISGHYRSQLNYSEDNLKQARASLERLYNSVRDL-TFSKDTPLDKTNLHYQQFIKAMDD 350
Query: 360 DFNTPVAISILFDLANIIN--KNKSIKMAKQLRG----LGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A+++LFDLA IN K +IK A G L N LGLL S+++FL+ +
Sbjct: 351 DFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQGD--- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E+ + V E IK R++AR+ K++ AD R +L I+LED P G T WR+
Sbjct: 408 EKNEEVAMIEALIKQ----RNDARQNKDWASADSARDKLAALKIVLEDGPGGTT-WRK 460
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQYLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
Length = 479
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/476 (48%), Positives = 300/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 20 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 79
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I PD +P AT +IP+I
Sbjct: 80 KYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIPEI 139
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 140 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 195
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 196 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 252
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 253 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 312
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + + E RF+ AMNDDFN
Sbjct: 313 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDASATVAGGEAFEARFVEAMNDDFN 369
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL++
Sbjct: 370 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG------ 423
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N E +I+ I R EARK K++ AD R L GIILED P G T WRR
Sbjct: 424 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILEDGPQGTT-WRR 478
>gi|392421163|ref|YP_006457767.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
gi|390983351|gb|AFM33344.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
Length = 461
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 295/475 (62%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLTKTKEAFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRASENGEPFQALVERMIDAMHEDETRLNVLRPDIEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+
Sbjct: 122 MHTMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ + RF +AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKGALERFYNGLKGLPEATPGG----GDEFVARFGVAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRESDLAAAAALAARLKELAGVLGVLQLEPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDATE--VEALIAARLTARAEKNWAESDRIRDQLTALGVVLEDGKGGTT-WR 458
>gi|187608842|sp|A7MK00.2|SYC_CROS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I PD +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVTEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + + E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDASATVAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSGAQANDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIVKRLEARKAKDWAAADAARDRLNEMGIILEDGPQGTT-WRR 460
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 EQMQNMIGNLVNKGSAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 5 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 64
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 65 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 124
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 125 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVE 180
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 181 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 237
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 238 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 297
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 298 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 357
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 358 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 417
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 418 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 473
Query: 470 RR 471
RR
Sbjct: 474 RR 475
>gi|378578319|ref|ZP_09826994.1| cysteinyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
gi|377818599|gb|EHU01680.1| cysteinyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
Length = 461
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 303/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +IP I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHSDFDALGILPPDVEPRATRHIPDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E LI G AY +NG DV + V + ++YG LS + L E + K++
Sbjct: 122 IALVETLIARGHAYVADNG----DVMFDVLSDVDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---SWPSPWGNGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLRHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + E RF AMNDDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALRHTDRTVAAS---GGEAFEARFREAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS M A +LR + + LG+L+ + FL+++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMTTASALAAKLREIADVLGILQQEPEVFLQSS-----A 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ + R++AR K++ +AD R +L G+I+ED P G T WRR
Sbjct: 407 QGNDDEVAEIEHWVKARADARAAKDWAQADVARDKLNALGVIVEDGPQGST-WRR 460
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 299/479 (62%), Gaps = 32/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E LI G AY +NG DV + + + +YGKLS + L E + K+
Sbjct: 122 IELVETLIERGFAYVADNG----DVMFEIAKYDDYGKLSRQDLDQLQAGARVEIESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
LDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 SLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NYSE LN A+ SL RLY +++ +P E + KRF AMN
Sbjct: 295 SGHYRSQLNYSEDNLNQARASLERLYTSLRGLDISVPAAG-------GEDYVKRFTDAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A IN+ K+ + +R L + +G+L + FLK +
Sbjct: 348 DDFNTPEAYSVLFDMAREINRLKTEDVMAASALGALMRELADVIGILHQDPEAFLKGDAG 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+++R K++ AD R +L GI+LED G T WRR
Sbjct: 408 NDDEVA------EIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLEDGSEGTT-WRR 459
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCG+T YD CH+GH R + FD+V R+LR Y++
Sbjct: 10 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 69
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N E+ LT R + +D L+I PD +P AT++IP+I
Sbjct: 70 KYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPEI 129
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY +NG DV ++V +YG LS + L E + K++
Sbjct: 130 IEIVEQLITRGHAYVASNG----DVMFAVDTDPDYGLLSRQDLEQLQAGARVEIADVKRN 185
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 186 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 242
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS GNF TIRD+L+ Y+ E +R+F++
Sbjct: 243 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLQHYDAETVRYFLM 302
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + K + RF AM+DDFN
Sbjct: 303 SGHYRSQLNYSEENLKQARSALERLYTALR---GTDSKAEPAGGDEFESRFREAMDDDFN 359
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ KS MA+ +LR L LGLLE + FL+ +
Sbjct: 360 TPEAYSALFDLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQGGAQADDS 419
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 420 EVAQ-----IEALIKQRNDARAAKDWAMADSARDQLNALGIVLEDGPQGTT-WRR 468
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 302/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++ N+ +K++ P+ K+ +YVCG+T YD CHLGHAR + FD++ R+LR YDV
Sbjct: 13 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 72
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A+ E ++LT R + D L I PP+ +P T +IPQI
Sbjct: 73 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 132
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+L+ AY NG DV +S + YGKLSG+ I+ E N +K+D
Sbjct: 133 ISMIERLLHRQFAYIAENG----DVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRD 188
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAM+C+ LG+HFDIHGGG DL FPH
Sbjct: 189 PLDFVLWKRAKPGEPV---WPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPH 245
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VNYW+H+G V +N +KMSKS NF T+RD+L +++ + +RFF+L
Sbjct: 246 HENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLL 305
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYR +NYSE ++ A+ SL RLY A + ++ ++ RF AM+DDFN
Sbjct: 306 SAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQ----HDAWRARFCEAMDDDFN 361
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ILF+L IN+ +++ +A L+ LGN LGLLE S+D FLKN +
Sbjct: 362 TPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKN------R 415
Query: 417 KNVNYSENDIKLK-IYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ +E + K I+ RSEAR+ + +AD++R EL GI LED+ T WR
Sbjct: 416 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGE-NTSWR 469
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 303/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LQLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRIVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 132 IDIVQKLIQRRHAYVADNG----DVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNGKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDTFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSNEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R L GI+LED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNEARAAKDWAVADAARNALTEMGIVLEDGPNGTT-WRK 468
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 302/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++ N+ +K++ P+ K+ +YVCG+T YD CHLGHAR + FD++ R+LR YDV
Sbjct: 22 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 81
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A+ E ++LT R + D L I PP+ +P T +IPQI
Sbjct: 82 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 141
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+L+ AY NG DV +S + YGKLSG+ I+ E N +K+D
Sbjct: 142 ISMIERLLHRQFAYIAENG----DVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRD 197
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAM+C+ LG+HFDIHGGG DL FPH
Sbjct: 198 PLDFVLWKRAKPGEPV---WPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPH 254
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VNYW+H+G V +N +KMSKS NF T+RD+L +++ + +RFF+L
Sbjct: 255 HENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLL 314
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYR +NYSE ++ A+ SL RLY A + ++ ++ RF AM+DDFN
Sbjct: 315 SAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQ----HDAWRARFCEAMDDDFN 370
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ILF+L IN+ +++ +A L+ LGN LGLLE S+D FLKN +
Sbjct: 371 TPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKN------R 424
Query: 417 KNVNYSENDIKLK-IYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ +E + K I+ RSEAR+ + +AD++R EL GI LED+ T WR
Sbjct: 425 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGE-NTSWR 478
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 311/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N+E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENDETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIENFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|417791399|ref|ZP_12438856.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449309141|ref|YP_007441497.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
gi|333954515|gb|EGL72360.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449099174|gb|AGE87208.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii SP291]
Length = 461
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I PD +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDASATAAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE + ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQAPEQFLQSGAQANDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIVKRLEARKAKDWAAADAARDRLNEMGIILEDGPQGTT-WRR 460
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|429216070|ref|ZP_19207229.1| cysteinyl-tRNA synthetase [Pseudomonas sp. M1]
gi|428153723|gb|EKX00277.1| cysteinyl-tRNA synthetase [Pseudomonas sp. M1]
Length = 461
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/478 (46%), Positives = 296/478 (61%), Gaps = 31/478 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L +YN+ S+ K+ F P+ +V +YVCG+T YD+CH+GHAR+M+ FD++ RWLR Y+
Sbjct: 2 ALSVYNTLSKAKEPFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVIARWLRQRGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII A++N E LT R I A ED L + PD +P AT +I
Sbjct: 62 LTYVRNITDIDDKIIRRAQENGEPFDALTERMIAAMHEDEARLSVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+
Sbjct: 122 MHAMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDESKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKAAKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+RF +
Sbjct: 235 HHENEIAQSEAATGKPYAATWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRFLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y A++ +P++ E A+RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEDNLKEAKGALERFYTALRGLPEVEAAG----GEAFAERFAAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LF++A +N+ + ++L GL LG+L+ D FL+
Sbjct: 351 NTPEAVAVLFEMAREVNRLREADLQAAAALAAKLRELAGL---LGVLQLEPDAFLQAGA- 406
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ ++ I R EAR KN+ E+D+IR EL G++LED G T WR
Sbjct: 407 ---AGKVDAAQ--VEALIQARLEARAAKNWAESDRIRDELTAMGVVLEDGKGGTT-WR 458
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKRAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQGFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 302/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++ N+ +K++ P+ K+ +YVCG+T YD CHLGHAR + FD++ R+LR YDV
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A+ E ++LT R + D L I PP+ +P T +IPQI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+L+ AY NG DV +S + YGKLSG+ I+ E N +K+D
Sbjct: 122 ISMIERLLHRQFAYIAENG----DVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAM+C+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKRAKPGEPV---WPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VNYW+H+G V +N +KMSKS NF T+RD+L +++ + +RFF+L
Sbjct: 235 HENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYR +NYSE ++ A+ SL RLY A + ++ ++ RF AM+DDFN
Sbjct: 295 SAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQ----HDAWRARFCEAMDDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ILF+L IN+ +++ +A L+ LGN LGLLE S+D FLKN +
Sbjct: 351 TPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKN------R 404
Query: 417 KNVNYSENDIKLK-IYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ +E + K I+ RSEAR+ + +AD++R EL GI LED+ T WR
Sbjct: 405 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGE-NTSWR 458
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/478 (45%), Positives = 305/478 (63%), Gaps = 32/478 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P+ GKV +YVCGIT YDYCH+GHAR + FD++ R+LR + +DV
Sbjct: 2 LQIYNTLTRQKEAFKPLVAGKVGMYVCGITIYDYCHVGHARTYVSFDVMNRFLRHSGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+I LT R KA ED L++ P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRANENGEAIDALTVRMTKAMHEDFDALNMLPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
++MIE+LI AY +NG DV + V F YG LS + L + + E
Sbjct: 122 IEMIERLIDKKHAYVASNG----DVLFDVSTFEQYGSLSQQDLDMLQAGARVDVAEG--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K ++P W+S WG GRPGWHIECSAMS LG+HFDIHGGG DL+
Sbjct: 175 KDDPLDFVLWKKAKVDEP---SWSSPWGEGRPGWHIECSAMSNKHLGAHFDIHGGGSDLQ 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQS A K+VN W+H+G V++N +KMSKS GNF T+RD+LK+Y+ E +RF
Sbjct: 232 FPHHENEIAQSCCATGEKYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEYDRESVRF 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F++ HYRS +NYS L A+ ++ R+Y A++ + + L + RF AMND
Sbjct: 292 FLINGHYRSQLNYSTENLEQARAAMERIYTALRGVEVVE----TSLENDYVARFNTAMND 347
Query: 360 DFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFNTP A+ ++F+LA IN+ N++ ++A L+ LG LG+ + + FL+
Sbjct: 348 DFNTPEALPVIFELAKEINRLKDEDANQAGQLAFILKTLGEILGIAQQDPESFLQG---- 403
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR KN+ AD+ R +L G++LED GKT WR+
Sbjct: 404 ---EQADDEVAEIEALILQRNQARADKNWALADEARDKLTALGVVLEDSA-GKTTWRK 457
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 306/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ + L R + +D L+I PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCEQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IAIVEKLIQRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 295 SAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDTFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ M A +LR L LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMARELNKLKTEDMDKANGLAARLRELAGILGLLQLDPEQFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R L GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLEDGLNGTT-WRK 458
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 309/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L+ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDHSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQAAVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|401762604|ref|YP_006577611.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174138|gb|AFP68987.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 461
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 297/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+IQ PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ EKLI G AY +NG DV +SV YG LS + L + + K++
Sbjct: 122 IEITEKLIARGHAYVADNG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K D E RF+ MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVPAAGGDAFE---ARFVEVMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 295/475 (62%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR + Y +
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A + + LT+R I D L + PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTARLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLDKEHAYVADNG----DVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|343506381|ref|ZP_08743870.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342802714|gb|EGU38117.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 460
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GK+ +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +IP+I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IALVEKLIERGFAYVASNG----DVMFEVSKFDEYGKLSKQDLDQLQAGARVDVESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ + + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVEAAGGDEYQVRFNDAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN K ++I+ A L R + +G+L ++ FLK + + +
Sbjct: 352 TPEAYSVLFDMAREINRLKTENIEQASALGVVMRQMAEVIGILHQDAEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI LED G T WRR
Sbjct: 412 V------AEIEALIKLRNDSRASKDWANADLARDKLNEMGIELEDGAEGTT-WRR 459
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|389841851|ref|YP_006343935.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|387852327|gb|AFK00425.1| cysteinyl-tRNA synthetase [Cronobacter sakazakii ES15]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I PD +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPDSEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDASATAAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSGAQANDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIVKRLEARKAKDWAAADAARDRLNEMGIILEDGPQGTT-WRR 460
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5.1|SYC_PHOLL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 298/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI PGKV +YVCGIT YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +N+ES LT R + +D L+I PD +P AT +I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAAENSESCDDLTGRMLAEMYKDFDALNILRPDLEPRATRHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ + E LI G AY +NG DV +SV + +YG LS + +S E + K++
Sbjct: 122 IALTESLIKRGHAYVADNG----DVMFSVESDQDYGLLSRQDLSQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NY+E L A+ +L R Y A++ +P E RFI AMN
Sbjct: 295 SGHYRSQLNYTEDNLKQARTALERFYTALRGTDASVPPAG-------GEIFEARFIDAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ KS M A +LR L LGLL+ ++FL I
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKSEDMDAANGLAAELRKLAGILGLLQQQPEQFLHRGIQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ ++ I+ I R++ARK K++ AD R +L GI LED P G T WRR
Sbjct: 408 ADDEEIAK-----IEALIKQRNDARKNKDWPLADSARNQLNEMGIELEDGPQG-TSWRR 460
>gi|384415761|ref|YP_005625123.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI G AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IEMTERLIARGHAYVASNG----DVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDANATPAGGAEFEARFRTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +LR L LGLLE + FL+ +
Sbjct: 352 TPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGGAQADDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR KN+ AD R +L GI+LED P G T WRR
Sbjct: 412 EVAK-----IEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTT-WRR 460
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 309/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+ +K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVTEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|343513226|ref|ZP_08750335.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342793531|gb|EGU29323.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 460
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GK+ +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +IP+I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IALVEKLIERGFAYVASNG----DVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ + + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVEAAGGDEYQTRFNDAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS--IKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ I+ A L R + +G+L ++ FLK + + +
Sbjct: 352 TPEAYSVLFDMAREINRLKAENIEQASALGVVMRQMAEVIGILHQDAEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI LED G T WRR
Sbjct: 412 V------AEIEALIKLRNDSRASKDWANADLARDKLNEMGIELEDGAEGTT-WRR 459
>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|61216168|sp|Q66DK9.1|SYC_YERPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558803|sp|B2K7N2.1|SYC_YERPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 461
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI G AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IEMTERLIARGHAYVASNG----DVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDANATPAGGAEFEARFRTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +LR L LGLLE + FL+ +
Sbjct: 352 TPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGGAQADDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR KN+ AD R +L + GI+LED P G T WRR
Sbjct: 412 EVAK-----IEALIKQRNDARSSKNWALADAARDQLNDLGIVLEDGPQGTT-WRR 460
>gi|378696150|ref|YP_005178108.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 459
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 312/479 (65%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPHATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALR---GTDQSAVAFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R++AR K++ AD R EL GI+LED PNG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNKARAAKDWAAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|343514072|ref|ZP_08751154.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
gi|342800738|gb|EGU36249.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
Length = 460
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 302/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI GK+ +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L+++ PD +P AT +IP+I
Sbjct: 62 TFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDIEPRATEFIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IALVEKLIERGFAYVASNG----DVMFEVSKFDEYGKLSKQDLDQLQAGARVDIESAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHNTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ + + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVEAAGGDEYQARFNDAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS--IKMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ I+ A L R + +G+L ++ FLK + + +
Sbjct: 352 TPEAYSVLFDIAREINRLKAENIEQASALGVVMRQMAEVIGILHQDAEAFLKGDAGNDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+++R K++ AD R +L GI LED G T WRR
Sbjct: 412 V------AEIEALIKLRNDSRASKDWANADLARDKLNEMGIELEDGAEGTT-WRR 459
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWPSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 302/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F P+ PGKV +YVCGIT YD CH+GH R + FD++ R+LR + YDV
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
++RNITD+DDKII A +N ES ++LT R I D L+++ PD++P AT +IP+I
Sbjct: 62 NFLRNITDVDDKIIKRANENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+EKLI AY + NG DV +SV +F YG+LSG+ N +++ E +
Sbjct: 122 IDMVEKLIEKEHAYVSGNG----DVLFSVSSFPEYGRLSGQ----NLDQLQAGARVEVED 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DP+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 TKRDPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS NF TIRD+L+ Y+ +R
Sbjct: 231 QFPHHENEIAQSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAATVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L AK +L RLY ++K + D + +F +AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVEAASAD---EYVAKFKVAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LF++ IN+ K AK +L+ L + LG+L+ D F K
Sbjct: 348 DDFNTPEAYSVLFEMVREINRLKEADNAKASSLGVKLKELADVLGILDQDVDTFFKGEGS 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T+ +I+ I R+ AR K++ AD R L G+ILED P G T WR+
Sbjct: 408 TDEVA-------EIEALIAERNRARAEKDWPAADVARDGLNALGVILEDGPEGTT-WRK 458
>gi|429083804|ref|ZP_19146830.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
gi|426547158|emb|CCJ72871.1| Cysteinyl-tRNA synthetase [Cronobacter condimenti 1330]
Length = 461
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/476 (48%), Positives = 300/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I P+ +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + + E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDSEAAPAGGEAFETRFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N E +I+ I R EARK K++ AD R L GIILED P G T WRR
Sbjct: 406 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 301/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E+L+ G AY +GDV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVERLLERGHAYV----AADGDVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 NKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ D E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEENLKQARAALERLYTAIKD---VDLTVAADPAEEFVAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K+ +AK ++ L + LGLL F K
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKTTDIAKASALAVAMKQLADVLGLLSQDPSAFFKG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G++LED P+G T WR+
Sbjct: 405 ----EGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVVLEDGPSGTT-WRK 458
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123284|ref|YP_005505904.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127139|ref|YP_005509753.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|384139080|ref|YP_005521782.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|420548145|ref|ZP_15045976.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|420553460|ref|ZP_15050726.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|420559037|ref|ZP_15055595.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|420564461|ref|ZP_15060440.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|420569501|ref|ZP_15065018.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|420575167|ref|ZP_15070142.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|420580485|ref|ZP_15074976.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|420585834|ref|ZP_15079824.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|420590946|ref|ZP_15084421.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|420596334|ref|ZP_15089269.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|420601996|ref|ZP_15094308.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|420607428|ref|ZP_15099212.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|420612817|ref|ZP_15104048.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|420618197|ref|ZP_15108746.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|420623493|ref|ZP_15113510.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|420628572|ref|ZP_15118118.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|420633693|ref|ZP_15122712.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|420638899|ref|ZP_15127398.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|420644384|ref|ZP_15132392.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|420649655|ref|ZP_15137163.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|420655294|ref|ZP_15142232.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|420660785|ref|ZP_15147156.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|420666090|ref|ZP_15151921.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|420670966|ref|ZP_15156357.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|420676308|ref|ZP_15161217.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|420681923|ref|ZP_15166294.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|420687244|ref|ZP_15171028.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|420692464|ref|ZP_15175609.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|420698237|ref|ZP_15180687.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|420704036|ref|ZP_15185317.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|420709438|ref|ZP_15190082.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|420714890|ref|ZP_15194936.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|420720394|ref|ZP_15199666.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|420725871|ref|ZP_15204476.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|420731467|ref|ZP_15209496.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|420736490|ref|ZP_15214034.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|420741963|ref|ZP_15218954.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|420747666|ref|ZP_15223787.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|420753121|ref|ZP_15228643.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|420758860|ref|ZP_15233290.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|420764162|ref|ZP_15237915.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|420769390|ref|ZP_15242606.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|420774374|ref|ZP_15247118.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|420779986|ref|ZP_15252059.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|420785573|ref|ZP_15256951.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|420790732|ref|ZP_15261580.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|420796262|ref|ZP_15266544.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|420801311|ref|ZP_15271084.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|420806674|ref|ZP_15275938.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|420812024|ref|ZP_15280749.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|420817545|ref|ZP_15285730.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|420822854|ref|ZP_15290497.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|420827943|ref|ZP_15295069.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|420833622|ref|ZP_15300202.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|420838498|ref|ZP_15304604.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|420843684|ref|ZP_15309311.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|420849347|ref|ZP_15314399.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|420854999|ref|ZP_15319197.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|420860203|ref|ZP_15323771.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|421764579|ref|ZP_16201368.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
gi|21264007|sp|Q8ZCC0.1|SYC_YERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123073499|sp|Q1CKY1.1|SYC_YERPN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123372235|sp|Q1C4U1.1|SYC_YERPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470969|sp|A7FL46.1|SYC_YERP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470970|sp|A4TP63.1|SYC_YERPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558804|sp|A9R253.1|SYC_YERPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|342854209|gb|AEL72762.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|391423674|gb|EIQ86138.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|391424374|gb|EIQ86753.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|391424729|gb|EIQ87076.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|391438705|gb|EIQ99426.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|391439857|gb|EIR00474.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|391443572|gb|EIR03875.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|391455549|gb|EIR14656.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|391456444|gb|EIR15468.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|391458487|gb|EIR17345.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|391471519|gb|EIR29074.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|391472873|gb|EIR30293.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|391473719|gb|EIR31069.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|391487453|gb|EIR43379.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|391489029|gb|EIR44814.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|391489638|gb|EIR45367.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|391503544|gb|EIR57731.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|391503810|gb|EIR57967.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|391508889|gb|EIR62571.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|391519328|gb|EIR71970.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|391521221|gb|EIR73707.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|391522153|gb|EIR74563.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|391534333|gb|EIR85521.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|391537088|gb|EIR88010.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|391539374|gb|EIR90102.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|391552393|gb|EIS01819.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|391552769|gb|EIS02164.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|391553371|gb|EIS02701.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|391567328|gb|EIS15201.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|391568468|gb|EIS16184.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|391573381|gb|EIS20451.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|391581635|gb|EIS27496.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|391584036|gb|EIS29622.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|391594270|gb|EIS38438.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|391597353|gb|EIS41185.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|391598656|gb|EIS42350.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|391611769|gb|EIS53912.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|391612314|gb|EIS54398.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|391615548|gb|EIS57299.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|391624825|gb|EIS65408.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|391630058|gb|EIS69884.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|391635620|gb|EIS74755.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|391637683|gb|EIS76572.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|391647632|gb|EIS85241.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|391651309|gb|EIS88497.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|391656004|gb|EIS92682.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|391660617|gb|EIS96746.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|391668146|gb|EIT03408.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|391677645|gb|EIT11934.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|391678488|gb|EIT12696.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|391679224|gb|EIT13376.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|391691554|gb|EIT24472.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|391694557|gb|EIT27202.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|391696240|gb|EIT28745.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|391708199|gb|EIT39474.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|391711820|gb|EIT42751.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|391712687|gb|EIT43541.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|391724443|gb|EIT54019.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|391725375|gb|EIT54847.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|391727841|gb|EIT57009.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|411174690|gb|EKS44721.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
Length = 461
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI G AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IEMTERLIARGHAYVASNG----DVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDANATPAGGAEFEARFRTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +LR L LGLLE + FL+ +
Sbjct: 352 TPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGGAQADDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR KN+ AD R +L GI+LED P G T WRR
Sbjct: 412 EVAK-----IEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTT-WRR 460
>gi|419839695|ref|ZP_14363100.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
gi|386909118|gb|EIJ73795.1| cysteine--tRNA ligase [Haemophilus haemolyticus HK386]
Length = 459
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 307/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGPNGTT-WRK 458
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/449 (49%), Positives = 289/449 (64%), Gaps = 21/449 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
++V YVRNITDIDDKIIA A +N ESI LT RFI+A ED+ L PD P AT+YI
Sbjct: 61 WNVKYVRNITDIDDKIIARANENGESITALTDRFIQAMNEDAENLGCLHPDEAPRATDYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY + NGDV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGHLVNKGAAYPS----ANGDVYFEVEKFARYGRLSGRKLDDMQAGASERVDVD 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LLFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S+ L AK +L R Y A K ++ D L+E +RF IA
Sbjct: 294 RYFIVSSHYRSPVNFSDFALKEAKTTLSRFYHAFKAYQQVYADLSTDVLDETFVERFNIA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT AI++LF++ +N+ + A+Q LR L N LGL++Y+ DEFLK+
Sbjct: 354 MRDDFNTSEAIAVLFEIIKELNRAVKEENAEQATLYYSTLRHLTNILGLVQYNVDEFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARK 438
+I E + SE DI I R +A+K
Sbjct: 414 DIGQEA---LGLSEADITDFIQQRVDAKK 439
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 294/475 (61%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR + Y +
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLDKEHAYVADNG----DVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAG----GDEQVDRFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ + FLK + E
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAGLGARLRELGAVLGILQQDPEAFLKGDEADEEV 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 411 A-------EIERLIAERNQARADKNWAAADAARNRLTEMGIVLED-SAGKTSWRR 457
>gi|88860441|ref|ZP_01135079.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
gi|88817639|gb|EAR27456.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
Length = 459
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/477 (47%), Positives = 302/477 (63%), Gaps = 29/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+S+YVCGIT YDYCH+GHAR + FD++ R+ R YDV
Sbjct: 2 VQIYNTLTRQKEQFKPMVAGKISMYVCGITIYDYCHVGHARTYVSFDVMNRYFRHLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE I LT R KA ED L++ P D +P T +IP+I
Sbjct: 62 TYVRNITDVDDKIIKRAHENNEEINDLTVRMTKAMHEDFNALNMLPADIEPTVTGHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ M+E+LI G AY NG DV + V F YG LS + +S E + K D
Sbjct: 122 ITMVERLIEKGHAYIAGNG----DVLFDVSTFAAYGALSQQDLSMLQAGARVEVDMGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WGAGRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAK---PEEPSWGSPWGAGRPGWHIECSAMSSKHLGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK+Y+ E +RFF++
Sbjct: 235 HENEIAQSCCASGQKYVNTWIHTGMVQVNKEKMSKSLNNFFTVREVLKQYDRETVRFFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMNDD 360
HYRS +NYS+ L+ A+ SL R+Y A++ + +DL NE + +F AMNDD
Sbjct: 295 NGHYRSQLNYSQENLDQARSSLERIYTALRGVTPTP----VDLAANE-YVAKFRQAMNDD 349
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A+ ++F+LA IN+ +K+ ++A L+ + LG+ + + FL+ N +
Sbjct: 350 FNTPEALPVVFELAKEINRVKDSDSSKAAELAFVLKAITEVLGIAQQEPESFLQGNQDED 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R++AR KN+ AD R +L IILED GKT WR+
Sbjct: 410 EVAQ-------IEALIAQRNQARADKNWALADDARDKLNAMNIILEDSA-GKTTWRK 458
>gi|410447884|ref|ZP_11301976.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
gi|409979464|gb|EKO36226.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
Length = 426
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/445 (49%), Positives = 290/445 (65%), Gaps = 25/445 (5%)
Query: 32 ITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLT 91
+T YD CHLGHAR M+ FDI+ R+LR NY V ++RNITDIDDKII A +N E+I LT
Sbjct: 1 MTVYDNCHLGHARAMMAFDILARYLRFQNYKVNFIRNITDIDDKIIERANENKETIDALT 60
Query: 92 SRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYS 151
R I + QED +L ++ P ++P AT++I ++KMI LI G AY + GDV ++
Sbjct: 61 GRTIASMQEDFAMLGLELPTHEPRATDHIEGMIKMIGTLIDKGHAYHS----AGGDVFFA 116
Query: 152 VRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGR 210
VR F YGKLS + I N ++ KKDPLDF LWK +K N+P W+S WG GR
Sbjct: 117 VRTFPEYGKLSNKNIDDLNPGSRIAEDESKKDPLDFVLWKSAKPNEP---SWDSPWGPGR 173
Query: 211 PGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKI 270
PGWHIECS MS LG HFDIHGGG DL FPHHENEIAQSE A HKF NYWMHSG +KI
Sbjct: 174 PGWHIECSVMSLENLGKHFDIHGGGPDLLFPHHENEIAQSECASDHKFANYWMHSGLLKI 233
Query: 271 NNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLA 330
N +KMSKS GNF ++DL Y+PEVIR++++ SHY+S++N+ L+ A+ +L RLY A
Sbjct: 234 NGEKMSKSLGNFAMLKDLFVSYHPEVIRYYLISSHYKSSLNFDSDSLDQARSALTRLYQA 293
Query: 331 IKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIK----MA 386
+P + DL+E K FI +MNDD NTP A+SILF LA IN + + A
Sbjct: 294 ASLVP----LQESDLHEDSVKGFIDSMNDDLNTPEALSILFGLAKSINSTQDAQDQSMYA 349
Query: 387 KQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEAD 446
++ LG LGLL SS+ FL + + ++ +I KI R++AR K+FL+AD
Sbjct: 350 STMKELGKVLGLLNDSSEAFL--------QYGADLTDEEISQKIEERNQARNNKDFLKAD 401
Query: 447 KIRQELVNNGIILEDMPNGKTEWRR 471
+IR ELV+ GI+L+D +G T W++
Sbjct: 402 QIRDELVSQGILLDDSSDG-TSWKK 425
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 299/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F P+ PGKV +YVCG+T YD CH+GH R + FD++ R+LR + YDV
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES +LT R I +D L++ PD +P AT +IP+I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E+LI AY ++G DV +SV +F YG+LSG+ L E + K+D
Sbjct: 122 IDMVERLIERDHAYVASSG----DVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDTKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V I+ +KMSKS NF TIRD+L Y+ +R+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAATVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFI----IAMN 358
HYRS +NYSE L AK +L R+Y A+KD+ + + A+ F+ AM+
Sbjct: 295 SGHYRSQLNYSEDNLKQAKAALERIYTALKDLD-------LSVEAAPAQEFVAKFKTAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K+ MAK L+ L + LG+L D F K
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKELADVLGILGQDVDTFFKG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G+ILED P G T WR+
Sbjct: 405 ----EGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPEGTT-WRK 458
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 310/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT+RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYWMH GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEVSTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQVTVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I + + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DI---GQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 301/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++ N+ +K++ P+ K+ +YVCG+T YD CHLGHAR + FD++ R+LR YDV
Sbjct: 13 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 72
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A+ E ++LT R + D L I PP+ +P T +IPQI
Sbjct: 73 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 132
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+L+ AY NG DV +S + YGKLSG+ I+ E N +K+D
Sbjct: 133 ISMIERLLHRQFAYIAENG----DVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRD 188
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 189 PLDFVLWKRAKPGEPV---WPSPWGEGRPGWHIECSAMNCRYLGTHFDIHGGGSDLIFPH 245
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VNYW+H+G V +N +KMSKS NF T+RD+L +++ + +RFF+L
Sbjct: 246 HENEIAQSTSANVGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNRFDAQSVRFFLL 305
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYR +NYSE ++ A+ SL RLY A + ++ ++ RF AM+DDFN
Sbjct: 306 SAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQ----HDAWRARFCEAMDDDFN 361
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ILF+L IN+ +++ +A L+ LGN LGLLE S+D FLKN +
Sbjct: 362 TPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKN------R 415
Query: 417 KNVNYSENDIKLK-IYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ +E + K I+ RSEAR+ + +AD++R EL GI LED+ T WR
Sbjct: 416 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGE-NTSWR 469
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 309/482 (64%), Gaps = 22/482 (4%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M +YNS RKK F P G + +YVCG+T YDYCH+GHAR+M+ FD + R+LR
Sbjct: 1 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
+ V Y+RNITDIDDKII A +N E+I+ LT RFI A ED+ L PD P AT YI
Sbjct: 61 WKVRYIRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATEYI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF- 179
Q+ MI L+ G AY +NG DV + V F YG+LSGR + +E+ +
Sbjct: 121 DQMQNMIGNLVNKGAAYPASNG----DVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVE 176
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK P DF LWK +K N+P W S WG GRPGWHIECSAMS LG+HFDIHGGG D
Sbjct: 177 VEKKHPFDFVLWKHAKENEP---SWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSD 233
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE + ++VNYW+H GF+ ++ +KMSKS GNF TIRD+++K++PEVI
Sbjct: 234 LMFPHHENEIAQSEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVI 293
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIA 356
R+FI+ SHYRS +N+S++ L AK SL R Y + K ++ + + L++ +RF A
Sbjct: 294 RYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVERFNNA 353
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAKQ-------LRGLGNWLGLLEYSSDEFLKN 409
M DDFNT A+++LF+L +N+ + A Q LR L N LGL++++ D+FLK+
Sbjct: 354 MCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKS 413
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
+I E + S+ +I+ I R +A+K K+F +AD IRQ L+ G++LED G T W
Sbjct: 414 DIGQEA---LALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVW 469
Query: 470 RR 471
RR
Sbjct: 470 RR 471
>gi|421498398|ref|ZP_15945512.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
gi|407182600|gb|EKE56543.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
Length = 458
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 296/475 (62%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVSFDVVARYLRYAGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A + + LT R I +D L + PD +P AT +I +I
Sbjct: 62 TYVRNITDVDDKIIKRAAETRVTCDDLTERLIGDMHQDFDALGMLRPDIEPRATQHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E L+ AY +NG DV + V +F +YGKLSG+ L + K++
Sbjct: 122 IALVETLLEKEHAYVADNG----DVMFIVESFADYGKLSGQDLEQLQAGARVDVVEAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L ++ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHFDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P + RF+ AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAG----GDEQVARFVDAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K+ +A +LR LG LG+L+ D FLK N
Sbjct: 351 TPEAYSALFDLVREINRQKAEDIAVAAGLGARLRELGAVLGILQQDPDAFLKGN------ 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 405 -EADDEVAEIEQLIAQRNQARADKNWAAADAARARLTEMGIVLED-SAGKTSWRR 457
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 303/481 (62%), Gaps = 37/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F P+ PGKV +YVCGIT YD CH+GH R + FD++ R+LR + YDV
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
++RNITD+DDKII A +N ES +LT R I +D L+++ PD++P AT ++ +I
Sbjct: 62 NFLRNITDVDDKIIKRAAENKESCDSLTERLIGEMHKDFDSLNMKRPDFEPRATLHMAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+EKLI AY ++NG DV +SV +F YG+LSG+ L E + K+D
Sbjct: 122 IEMVEKLIEKEHAYVSSNG----DVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDSKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V ++ +KMSKS NF TIRD+L Y+ IR+F+L
Sbjct: 235 HENEIAQSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAATIRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHA-----KRFIIA 356
HYRS +NYSE L AK +L RLY A+KD +DL EP A +F A
Sbjct: 295 SGHYRSQLNYSEDNLKQAKSALARLYTALKD---------LDLTVEPAAAENFVSKFKQA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+ +N+ K +A+ +L+ L LG+LE D F K
Sbjct: 346 MDDDFNTPEAYSVLFDMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKG- 404
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
++ + +++ I R+ AR K++ AD R L G+ILED P G T WR
Sbjct: 405 ------ESNDAEVAEVEALIAERNRARAEKDWPAADIARDGLNALGVILEDGPEGTT-WR 457
Query: 471 R 471
+
Sbjct: 458 K 458
>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
gi|225203279|gb|EEG85633.1| cysteine--tRNA ligase [Proteus penneri ATCC 35198]
Length = 463
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 299/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YDV
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +NNE+ + LT+R + +D L+I PD +P AT++I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNIARPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY +NG DV +++ +YG LS + L E N K++
Sbjct: 122 IELTEALIKLGHAYVADNG----DVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY +++ + N + + E +FI AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTSLRGTDE-NAQPVG--GEAFEAQFIDAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA +N+ K++ M A LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDLAREVNRLKAVDMNAANGLAAVLRKLAKVLGLLEQEPEHFLQSGAKADDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+L I R++ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 SEV----EKIELLIQQRNDARKNKDWAAADVARDALTAMGIVLEDGPQG-TVWRR 461
>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM10+]
gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
Length = 476
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 300/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 17 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 76
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++I +I
Sbjct: 77 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 136
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI G AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 137 IEMTERLIARGHAYVASNG----DVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRN 192
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 193 PMDFVLWKMSK---PGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 249
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 250 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 309
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 310 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGAEFEARFRTA 360
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ MA +LR L LGLLE + FL+
Sbjct: 361 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 420
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + I+ I R++AR KN+ AD R +L GI+LED P G T WR
Sbjct: 421 AQADDDEVAK-----IEALIKQRNDARSSKNWALADAARDQLNELGIVLEDGPQGTT-WR 474
Query: 471 R 471
R
Sbjct: 475 R 475
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 300/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PITPGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I +D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 TKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKD---VDLTVAAAPAEEFVAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K MA+ L+ L + LGLL + F +
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG-- 405
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+ AR K++ AD R L G+ LED P+G T WR+
Sbjct: 406 -----GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELEDSPSGTT-WRK 458
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1.1|SYC_YERPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/481 (46%), Positives = 301/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI G AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IEMTERLIARGHAYVASNG----DVMFAVDSDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E RW S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGVEFEARFRTA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ MA +LR L LGLLE + FL+
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + I+ I R++AR K++ AD R +L + GI+LED P G T WR
Sbjct: 406 AQADDDEVAK-----IEALIKQRNDARSSKDWALADAARDQLNDLGIVLEDGPQGTT-WR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 305/486 (62%), Gaps = 41/486 (8%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L+IYNS +R+KQ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 1 MPMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V + RNITD+DDKII A +NNES + LT R I D L++ PD++P AT +I
Sbjct: 61 YEVNFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----E 175
+I+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E
Sbjct: 121 AEIIDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVE 172
Query: 176 KNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGG 235
+ K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG
Sbjct: 173 VDENKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGG 229
Query: 236 QDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
DL+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E
Sbjct: 230 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 289
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII 355
+R+F+L HYRS +NYSE L A+ +L RLY AIKD+ + + A+ FI+
Sbjct: 290 TVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVD-------LTVAAAPAEEFIV 342
Query: 356 ----AMNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDE 405
AM+DDFNTP A S+LFD+ IN+ K+ +AK ++ L + LGLL D
Sbjct: 343 KFKAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDA 402
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
F K + + +I+ I R+ AR K++ AD R L G++LED P+G
Sbjct: 403 FFKG-------EGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLEDGPSG 455
Query: 466 KTEWRR 471
T WR+
Sbjct: 456 TT-WRK 460
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 302/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++ N+ +K++ P+ K+ +YVCG+T YD CHLGHAR + FD++ R+LR YDV
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A+ E ++LT R + D L I PP+ +P T +IPQI
Sbjct: 62 TFVRNITDIDDKIIQRARDTGEDWRSLTERMVHEMHIDFAKLGILPPNIEPRPTEHIPQI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MIE+L+ AY NG DV +S + YGKLSG+ I+ E N +K+D
Sbjct: 122 ISMIERLLHRQFAYIAENG----DVMFSTASAKGYGKLSGQDITMLRAGTRIEVNEYKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAM+C+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKRAKPGEPV---WPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VNYW+H+G V +N +KMSKS +F T+RD+L +++ + +RFF+L
Sbjct: 235 HENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNSFFTLRDILNRFDAQSVRFFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYR +NYSE ++ A+ SL RLY A + ++ ++ RF AM+DDFN
Sbjct: 295 SAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQ----HDAWRARFCGAMDDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A++ILF+L IN+ +++ +A L+ LGN LGLLE S+D FLKN +
Sbjct: 351 TPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKN------R 404
Query: 417 KNVNYSENDIKLK-IYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+++ +E + K I+ RSEAR+ + +AD++R EL GI LED+ T WR
Sbjct: 405 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDVGE-NTSWR 458
>gi|398800481|ref|ZP_10559753.1| cysteinyl-tRNA synthetase [Pantoea sp. GM01]
gi|398095648|gb|EJL85984.1| cysteinyl-tRNA synthetase [Pantoea sp. GM01]
Length = 461
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/476 (46%), Positives = 302/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI G++ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANQNGESIETLTNRMIAEMHNDFAALGILPPDLEPRATRHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ LI AY +NG DV + V + YG LS + L E + K++
Sbjct: 122 IELVGTLIERNHAYVADNG----DVMFDVLSDKAYGVLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P WNS WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---AWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEVAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDANATAAGGEEFEARFRSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS +A +LR + N LG+L+ ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDKAAADALAAKLRQIANVLGILQQDPEQFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VNY E +I+ + RS+AR K++ +AD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNYDEVAEIEHWVKARSDARAAKDWAQADVARDKLNELGVIVEDGPQGSS-WRR 460
>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 459
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 310/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVERMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 459
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 310/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 300/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PITPGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I +D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 TKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKD---VDLTVAAAPAEEFVAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K MA+ L+ L + LGLL + F +
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG-- 405
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+ AR K++ AD R L G+ LED P+G T WR+
Sbjct: 406 -----GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELEDGPSGTT-WRK 458
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2.1|SYC_PECCP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAAENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHITDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERLYTALRGTDPDAAAQGGDEFE---GRFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAQAANQLASALRKLSGVLGLLEQDPEQFLQNGAQVD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R +AR K++ AD+ R L GI+LED P G T WRR
Sbjct: 410 ---NDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|403059410|ref|YP_006647627.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806736|gb|AFR04374.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 461
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALDRLYTALR---GTDASAAAHGGDEFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNGAQVDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR K++ AD+ R L + GI+LED P G T WRR
Sbjct: 412 EV-----KEIEALIQQRKDARAAKDWALADQARDRLNDMGIVLEDGPQG-TIWRR 460
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 300/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +N+E+ + LT+R + +D L++Q PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M E+LI AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IEMTERLIARDHAYVASNG----DVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPKG---GAEFEARFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++ T+
Sbjct: 352 TPEAYSVLFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSGAQTD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 410 ---NDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WRR 460
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/479 (47%), Positives = 294/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+I+ LT+R I D L+I PD +P AT+YI +I
Sbjct: 62 KYVRNITDIDDKIIRRATENGETIEQLTNRMIDEMHTDFRALNILSPDEEPRATHYIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IELVEKLIARRHAYVADNG----DVMFSVDTAPGYGVLSRQDLEQLKAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLSHYDAETIRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NY+E L A+ SL RLY A++ +P E RF AM+
Sbjct: 295 SGHYRSQLNYTEENLKQARASLERLYTALRGTDASVPAAG-------GEAFEHRFRDAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQL------RGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ A R L LGLLE+ + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKADDAAAASGLASALRQLAGVLGLLEHDPELFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR+ K++ AD R L GI+LED P G T WRR
Sbjct: 408 AD-----DSEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLEDGPQGTT-WRR 460
>gi|451965977|ref|ZP_21919232.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451315226|dbj|GAC64594.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 461
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 292/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYTL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES + LT R + D L+I PD +P AT++I +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV ++V +YG LS + L E K++
Sbjct: 122 IALVEQLIARGHAYVASNG----DVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ +E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARAALERLYTALRGTDATAQPAA---DEAFEGRFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQL------RGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA+ R L LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAQANALAAQLRRLAGVLGLLEQDPDAFLQSGASADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EAAQ-----IEALIKQRNDARAAKDWARADDARDQLNALGIVLEDGPQGTT-WRR 460
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 305/486 (62%), Gaps = 41/486 (8%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L+IYNS +R+KQ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR
Sbjct: 1 MPMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
Y+V + RNITD+DDKII A +NNES + LT R I D L++ PD++P AT +I
Sbjct: 61 YEVNFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----E 175
+I+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E
Sbjct: 121 AEIIDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVE 172
Query: 176 KNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGG 235
+ K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG
Sbjct: 173 VDENKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGG 229
Query: 236 QDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
DL+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E
Sbjct: 230 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 289
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII 355
+R+F+L HYRS +NYSE L A+ +L RLY AIKD+ + + A+ FI+
Sbjct: 290 TVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVD-------LTVAAAPAEEFIV 342
Query: 356 ----AMNDDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDE 405
AM+DDFNTP A S+LFD+ IN+ K+ +AK ++ L + LGLL D
Sbjct: 343 KFKAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDA 402
Query: 406 FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
F K + + +I+ I R+ AR K++ AD R L G++LED P+G
Sbjct: 403 FFKG-------EGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLEDGPSG 455
Query: 466 KTEWRR 471
T WR+
Sbjct: 456 TT-WRK 460
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 306/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVEKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ I K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGIDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R L GIILED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNEARTAKDWAAADAARNALTKMGIILEDGPNGTT-WRK 468
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +++K+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES + LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCEALTERLIGEMYADFDALNMKRPDIEPRATQYIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V F YGKLS + L + KK
Sbjct: 122 IALVERLIDRGFAYVASNG----DVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEEAKKS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK +P W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKMSKPGEP---TWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ S+ RLY +++ ++ + E +RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASMERLYTSLR---GLDTSVAAEGGEAFVERFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ K+A ++R L LGLLE + FLK N
Sbjct: 352 TPEAYSVLFDMAREINRLKAEDVAAASKLAARMRELAEVLGLLEQDPEAFLKGNT----- 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L GI+LED G T WRR
Sbjct: 407 EGGDDEVAEIEALIKARNDARANKDWAAADAARDALTAMGIVLEDGAQGTT-WRR 460
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/472 (45%), Positives = 305/472 (64%), Gaps = 22/472 (4%)
Query: 5 RIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVT 64
+IYN+ +R+K+ F P+ GKV LYVCGIT YD CH+GHAR + FD++ R+LR +DV
Sbjct: 3 QIYNTLTRQKETFKPLVAGKVGLYVCGITVYDVCHMGHARTYLSFDLMVRYLRHKGFDVN 62
Query: 65 YVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQIL 124
YVRNITD+DDKII A +N E+ + LT R I ED +++ PD +P T +IP+I+
Sbjct: 63 YVRNITDVDDKIIQRANQNGETAEQLTQRTIALMHEDFAAINLLEPDIEPRVTTHIPEII 122
Query: 125 KMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDP 183
+I++LI G AYQ +GDV + V + YGKLS + L N + E ++ K DP
Sbjct: 123 DVIQRLISKGHAYQ----APSGDVLFDVSTYDQYGKLSKQDLEQLNAGERVEVSSDKTDP 178
Query: 184 LDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHH 243
LDF LWK K +PY W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPHH
Sbjct: 179 LDFVLWKTVKPGEPY---WESPWGEGRPGWHIECSAMNSKHLGTHFDIHGGGSDLIFPHH 235
Query: 244 ENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILR 303
ENE+AQS A+ +VNYW+H+G V+++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 236 ENEVAQSCCAFDTPYVNYWIHTGMVQVDQEKMSKSLGNFFTLRDVLKDYDAETLRYFLMS 295
Query: 304 SHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDFN 362
+HYRS ++YSE + AK +L RLY A++D + N+ +D+ + + +RF AM+DDFN
Sbjct: 296 AHYRSQLSYSEENIKQAKSALERLYTALRD-SQPNFD--VDMQQGDYLQRFESAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKSIK---MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
TP A +++FDL INK+ + +A L LG LG L+ + +L+ I + +V
Sbjct: 353 TPEAFAVMFDLVKDINKSHGQEKSDLAGILLKLGAILGFLQLDPNAYLQGGIVESDEVSV 412
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R++AR K+++ AD R L G++LED NG T WR+
Sbjct: 413 ------IEGLIKARNDARADKDWIAADAARDALTAMGVVLEDGANGTT-WRK 457
>gi|152989578|ref|YP_001348862.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
gi|452878550|ref|ZP_21955749.1| cysteinyl-tRNA ligase [Pseudomonas aeruginosa VRFPA01]
gi|187629850|sp|A6V727.1|SYC_PSEA7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150964736|gb|ABR86761.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
gi|452184816|gb|EME11834.1| cysteinyl-tRNA ligase [Pseudomonas aeruginosa VRFPA01]
Length = 460
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGRFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + H +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----HVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRDSDLPAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|365539623|ref|ZP_09364798.1| cysteinyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
Length = 460
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/474 (46%), Positives = 298/474 (62%), Gaps = 24/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNSITRQKEEFKPIHANKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIADMHADFDALNMKRPDVEPRATAYIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++++LI G AY +NG DV + V F YGKLS + L + + K+
Sbjct: 122 IGLVQRLIERGFAYVASNG----DVMFEVSKFDEYGKLSKQDLDQLQAGARVDVDLAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGEGRPGWHIECSAMNSAILGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ ++ + E + RF IAM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARASLERLYTALR---GLDLTVPVAGGEEYVSRFTIAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A INK ++ + +R L + +G+L + FLK +
Sbjct: 352 TPEAYSVLFDMARDINKLKTENHQQASALGALMRELADVIGILHQDPEVFLKGDT----- 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
N + +I+ I R+++R K++ AD R +L GIILED P+G T WR
Sbjct: 407 -NGDDQVAEIEALIKLRNDSRAAKDWANADVARDKLNELGIILEDGPSGTT-WR 458
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|385870832|gb|AFI89352.1| Cysteinyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 461
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVHPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY+A++ + + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERLYIALR---GTDLSVAAHGGDEFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNGAQVD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R +AR K++ AD+ R L GI+LED P G T WRR
Sbjct: 410 ---NDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/480 (46%), Positives = 302/480 (62%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PITPGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I +D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 TKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKD---VDLTVAAAPAEEFVAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K MA+ L+ L + LGLL + F +
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQG--- 404
Query: 413 TERKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+Y E +I+ I R+ AR K++ AD R L G+ LED P+G T WR+
Sbjct: 405 -----GGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELEDGPSGTT-WRK 458
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 300/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PITPGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I +D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 TKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKD---VDLTVAAAPAEEFIAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K MA+ L+ L + LGLL + F +
Sbjct: 348 DDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG-- 405
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+ AR K++ AD R L G+ LED P+G T WR+
Sbjct: 406 -----GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELEDGPSGTT-WRK 458
>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 459
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 307/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGADQ---SAVAFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|343496600|ref|ZP_08734695.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342821044|gb|EGU55843.1| cysteinyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 461
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+NS +R+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNSLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATQFIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E LI G AY +NG DV + V+ + YGKLS + L + K+
Sbjct: 122 IDLVETLIERGFAYVADNG----DVMFEVKKYDEYGKLSRQDLDQLQAGARVDVELAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE LN A+ SL RLY +++ ++ E + RF AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSASPAGGEEYVTRFTEAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ ++ + LR L + +G+L + FLK +
Sbjct: 352 TPEAYSVLFDMAREVNRIKGENLEQASALGALLRELADVIGILHQDPEAFLKGGA-ADND 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IKL R+++R K++ AD R +L GI LED P G T WRR
Sbjct: 411 DEVAEIEALIKL----RNDSRAAKDWANADMARDKLNEMGIELEDGPEGTT-WRR 460
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALDRLYTALR---GTDASVAAHGGDEFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNGAQVDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR K++ AD+ R L GI+LED P G T WRR
Sbjct: 412 EV-----KEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|410616834|ref|ZP_11327819.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
gi|410163675|dbj|GAC31957.1| cysteinyl-tRNA synthetase [Glaciecola polaris LMG 21857]
Length = 464
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/478 (46%), Positives = 307/478 (64%), Gaps = 26/478 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRFLRHKGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A NNE+ LT+R I ED +++ PPD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANDNNETTSELTARTIAMMHEDFAAINLLPPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI NG AYQ +G DV + V ++ +YGKLS + L N + +N K D
Sbjct: 122 IAIIERLIANGHAYQAKSG----DVLFDVSSYRDYGKLSKQDLEQLNMGSRVDVDNDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK K P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKSVK---PGEPSWASPWGKGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+LK+++ E +R+F++
Sbjct: 235 HENEVAQSCCAYNTPYVNYWVHTGMVQVDSEKMSKSLGNFFTLRDVLKQHDSETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YSE + A+ +L RLY A++D+ + K+ + + RF AM+DDFN
Sbjct: 295 SAHYRSQLSYSEGNITQARSALERLYTALRDV--VASDKVDMQSGDYLVRFDKAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKS-----IKMAKQLRG----LGNWLGLLEYSSDEFLKNNIYT 413
TP A+++LFDLA INK K+ + A L G LG LG+L+ S +++L+ +
Sbjct: 353 TPEAMAVLFDLARGINKAKTEGESGAERASNLAGILLNLGQVLGILQRSPNDYLQGD--- 409
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ ++ I R++AR K++ AD R L I+LED PNG T WR+
Sbjct: 410 ---EQGGDESAQVEALIKARNDARSAKDWPAADAARDALNALNIVLEDGPNGTT-WRK 463
>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 461
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N E+ LT R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDLEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +++ + +YG LS + L E ++ K++
Sbjct: 122 IELTERLIARGHAYVASNG----DVMFAIDSDADYGLLSRQDLDQLQAGARVEVDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLGYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + D RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDPL---ATPDGGAEFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K+ MA +LR L LGLL+ + FL++ +
Sbjct: 352 TPEAYSALFDLAREVNRLKNEDMAAANAMAAELRKLAKVLGLLQQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKSKDWALADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|145633713|ref|ZP_01789439.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|144985473|gb|EDJ92294.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 310/479 (64%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N E+ W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEN---ELSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S++D I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 406 -----SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/481 (46%), Positives = 304/481 (63%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +N+E+ + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENSETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IELVERLIARDHAYVASNG----DVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANAAPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQTDGDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|387886020|ref|YP_006316319.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870836|gb|AFJ42843.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/476 (47%), Positives = 305/476 (64%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S KK+ F PI P K+ +YVCGIT YD CH+GHAR I FD++ R+ + +DVT+V
Sbjct: 4 YNSLSSKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTFV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII + +N E+I L R IK+ + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRSNENGETIDQLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLIS-----SNFNKINEKNNFKK 181
I+ L+ G AYQ NG DV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IQTLVEKGFAYQGTNG----DVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI +++++Y+PEVIR+ +
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYLL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L+ A+ S+ R + A++DI + D NE + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLDNARASVERFFNALRDIEPVEVNLPDDANE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA IN K++ K LR L + LG+L ++E+ K +
Sbjct: 352 NTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDTEEYFK------Q 405
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+VN SE I+ I R++A+K KN+ AD+IR EL N GIILED G T W++
Sbjct: 406 GDSVNVSE--IERLIAERAQAKKDKNYARADEIRNELQNQGIILEDSATGTT-WKK 458
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/479 (46%), Positives = 302/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+KQ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES + LT R I D L++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCEALTERLIGEMHRDFDALNMLRPDFEPRATLHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+E L+ G AY ++G DV +SV ++ +YG+LSG+ N +++ E +
Sbjct: 122 IDMVELLLARGHAYVASDG----DVLFSVASYPDYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 NKQNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY AIKD ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKD---VDLTVAAAPAEEFIAKFKAAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+ IN+ K+ +AK ++ L + LGLL D F K
Sbjct: 348 DDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFFKG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K+++ AD R L G++LED P+G T WR+
Sbjct: 405 ----EGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLEDGPSGTT-WRK 458
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 307/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 122 IDIVEKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ I K + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHGALERLYTALRGIDK---SAVAFGGENFVDAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAG---SDE 408
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R+EAR K++ AD R L GIILED PNG T WR+
Sbjct: 409 GEVAKIEALIKQ----RNEARTAKDWAAADAARNALTKMGIILEDGPNGTT-WRK 458
>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
Length = 461
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+I+ LT+R I D L+I PD +P AT+YI +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETIEQLTNRMIGEMHTDFQALNILSPDEEPRATHYIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IELVEKLIARRHAYVADNG----DVMFSVDTAPGYGVLSRQDLDQLKAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHGGDYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLTHYDAETIRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ SL RLY A++ + E +RF AM+DDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARASLERLYTALRGTDASASAAGGEAFE---RRFRDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDAAAANGLAAMLRQLAGVLGLLECDPELFLQSGAQAD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR+ K++ AD R L GI+LED P G T WRR
Sbjct: 410 ---DGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLEDGPQG-TIWRR 460
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/475 (48%), Positives = 307/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVEKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ I K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGIDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAG---SDE 418
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R+EAR K++ AD R L GIILED PNG T WR+
Sbjct: 419 GEVAKIEALIKQ----RNEARTAKDWAAADAARNALTKMGIILEDGPNGTT-WRK 468
>gi|451811301|ref|YP_007447756.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|451776459|gb|AGF47458.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 480
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 312/484 (64%), Gaps = 22/484 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ + K+ F P G V +YVCG+T YD+CHLGHAR+MIVFDIVQRWLR + V
Sbjct: 2 LHIYNTLTHTKEKFQPYHKGSVRMYVCGMTVYDFCHLGHARVMIVFDIVQRWLRNIGFRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII + + + I +T+ +I A D L + P+ +P AT+Y+ +
Sbjct: 62 EYVRNITDIDDKIIKRSLELKKDISDITNFYISAMHADERALWVNSPNKEPRATHYVDHM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
++MI++L GLAY NG DVN+ VR+F +YGKLS + + S + ++ ++ K
Sbjct: 122 IEMIQQLEKKGLAYHAENG----DVNFKVRSFPSYGKLSRKDLDSLRSGERVPVASD-KH 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK SK NDP + +WNS +G GRPGWHIECSAMS +LG DIHGGG DL FP
Sbjct: 177 DPLDFVLWKHSKENDPDDSKWNSCYGIGRPGWHIECSAMSHSILGLPIDIHGGGPDLIFP 236
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYN-------- 293
HHENEIAQ+EG Y F + WMH G + +N+ KMSKS N+CTIR+ + N
Sbjct: 237 HHENEIAQTEGVYGGVFSHNWMHCGPLMVNDYKMSKSLNNYCTIREAIGYGNLSNDEYCV 296
Query: 294 ----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
E++RFFI+R+HYRS NY L A+ SL +LY AI + + + +D ++P
Sbjct: 297 NTREAEMLRFFIVRNHYRSKQNYVIDNLIDAQSSLDKLYSAIINF-QFDSDYCVDWSDPS 355
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
A F AMNDDFNTP A++ILFDLA+ N++ ++ A+QL+ L + LGLL + + K+
Sbjct: 356 ATEFAEAMNDDFNTPKAVAILFDLASKANRDNCVRSARQLKSLSSILGLLNQDPENYFKS 415
Query: 410 NIY--TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
N + K+V S+ D++L + RS+A+K ++ E+D IR L +GI +ED+PN T
Sbjct: 416 NTRYGSGSIKSVYLSDEDVELLVLKRSQAKKNLDYKESDYIRNLLKESGIEVEDLPNYST 475
Query: 468 EWRR 471
WRR
Sbjct: 476 RWRR 479
>gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 459
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 304/476 (63%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S KK+ F PI P K+ +YVCGIT YD CH+GHAR I FD++ R+ + +DVT+V
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTFV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N E+ L R IK+ + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGETTDQLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE L+ G AYQ NG DV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLVEKGFAYQGTNG----DVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI +++++Y+PEVIR+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L+ A+ S+ RL+ A++DI + D NE + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDANE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA IN K++ K LR L + LG+L +E+ K +
Sbjct: 352 NTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFK------Q 405
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ SE I+ I R++A+K KN+ AD+IR EL N GIILED G T W++
Sbjct: 406 GDGIDVSE--IEKLIAERAQAKKDKNYARADEIRNELQNQGIILEDSATGTT-WKK 458
>gi|350424873|ref|XP_003493941.1| PREDICTED: cysteinyl-tRNA synthetase-like [Bombus impatiens]
Length = 463
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/479 (47%), Positives = 302/479 (63%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI P KV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTREKEAFNPIHPNKVGMYVCGVTIYDLCHIGHGRTFVAFDVVSRYLRFLGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A++N ES + LT R + D L+IQ PD +P AT ++ I
Sbjct: 62 TYVRNITDVDDKIIKRARENGESCQQLTERMLTEMYRDFDALNIQRPDQEPRATAHMADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ LI G AY NGDV +SV + +YG LS + L E K++
Sbjct: 122 IELVNTLIKRGHAYV----ATNGDVMFSVESDNHYGLLSRQNLEQLQAGARVEVTEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ +LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNNNVLGHHFDIHGGGADLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++++KMSKS GNF TIRD+LK Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGQYVNYWMHSGMVMVDHEKMSKSLGNFFTIRDVLKHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIP--KINYKKIIDLNEPHAKRFIIAMNDD 360
HYRS +NYSE L A+ +L R Y A++D +++Y+ + P+ RF +AMNDD
Sbjct: 295 SGHYRSQLNYSEENLKQARIALERWYTALRDTHNVEMDYQ-----DNPYYHRFCMAMNDD 349
Query: 361 FNTPVAISILFDLANIINKNKSI-------KMAKQLRGLG-NWLGLLEYSSDEFLKNNIY 412
FNTP A S+LFDLA+ INK K+ + A LR L N LGLL FL+
Sbjct: 350 FNTPEAYSVLFDLASEINKAKAEDNLLKANQSATLLRYLANNVLGLLTQDPQAFLQG--- 406
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
KN I+ I R+EAR KN+ AD R +L I+LED P G T WR+
Sbjct: 407 ----KNDEVDVAHIEALIKQRNEARATKNWALADAARDQLNQLNIVLEDGPTGTT-WRK 460
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 296/479 (61%), Gaps = 34/479 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A + N + LT R I +D L + PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETNVTCDDLTERLIGDMHQDFDALGMVRPDVEPRATQHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
++++E LI AY +NG DV + V ++ +YGKLSG+ + + ++ K N
Sbjct: 122 IELVESLIAQDHAYVADNG----DVMFIVDSYADYGKLSGQDLEQLQAGARVGVVDAKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL
Sbjct: 178 ----PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAESVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L R+Y A++D+P + RF+ AM+
Sbjct: 291 YFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAG----GDEQVARFVDAMD 346
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S LFDL IN+ K+ M+ +LR LG LG+L+ D FLK +
Sbjct: 347 DDFNTPEAYSALFDLVREINRQKAEDMSVAAGLGARLRELGAVLGILQQDPDAFLKGDEA 406
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E +I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 407 DEEVA-------EIERLIAERNQARADKNWAAADAARARLTEMGIVLED-SAGKTSWRR 457
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGVLSRQDLDQLQAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALDRLYTALR---GTDASVAAHGGDEFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNGAQVDDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR K++ AD+ R L GI+LED P G T WRR
Sbjct: 412 EV-----KEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|451812757|ref|YP_007449210.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|451778726|gb|AGF49606.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 484
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/492 (48%), Positives = 313/492 (63%), Gaps = 32/492 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R K F PI V++YVCG+T YDYCHLGHAR+M+VFDIVQRWLR +DV
Sbjct: 2 LQIYNTLTRTKSDFKPINYNVVNMYVCGMTVYDYCHLGHARIMVVFDIVQRWLRHIGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII + ++SIK +T +I A D L I+ P +P AT Y+ ++
Sbjct: 62 KYVRNITDIDDKIINKSLMEHKSIKEITDFYISAMHMDEDALSIEAPYKEPRATGYVDEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
+ +I+ L LAY+ +G DVN+S ++F YGKLSG ++ + N+I ++ K
Sbjct: 122 VNIIKLLENKDLAYRTPDG----DVNFSTKSFSGYGKLSGMNLTELRSGNRIPVASS-KI 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK SK +DP + RW S +G GRPGWHIECSAMS +LG+ DIHGGG DL FP
Sbjct: 177 DPLDFVLWKASKQDDPNDSRWMSCYGPGRPGWHIECSAMSSSILGNPIDIHGGGPDLVFP 236
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYN-------- 293
HHENEIAQ+EGA+ N+WMH G + +++ KMSKS GN+ TIR + K +
Sbjct: 237 HHENEIAQTEGAFGGNLANFWMHCGPLMVDDSKMSKSLGNYYTIRQAIGKESSPNDFRYQ 296
Query: 294 -----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIP-KINYKKIIDLNE 347
E++RFFI+RSHYRS NY+ L A+ SL RLYLA+ +I K +K +D +
Sbjct: 297 VNRREAEMLRFFIIRSHYRSKQNYTFENLVDAQNSLDRLYLALFNIGLKGEFK--VDWRD 354
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEY------ 401
+ F MNDDFNTP A+ ILFDLA+ +NKNK I AKQL+ L LGLL
Sbjct: 355 DASVAFKSTMNDDFNTPEAMVILFDLASKVNKNKCIYSAKQLKSLAGTLGLLSQDPAVYF 414
Query: 402 -SSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
S + + IY + + S+ DI+ IY RS +K N++EADKIR L ++ I LE
Sbjct: 415 SESTRYKTSMIYNDSSDTI--SKEDIEGLIYKRSIFKKNNNYIEADKIRTMLKDHNIELE 472
Query: 461 DMPNGKTEWRRI 472
D +G T WRR+
Sbjct: 473 DKIDGTTNWRRV 484
>gi|449472388|ref|XP_004153579.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 465
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/481 (47%), Positives = 298/481 (61%), Gaps = 31/481 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 4 SMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGY 63
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
++ YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I
Sbjct: 64 NLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIH 123
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+++ +KLI G AY +NG DV +SV YG LS + L + + K
Sbjct: 124 EIIEITQKLIERGHAYVADNG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVK 179
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL F
Sbjct: 180 RNPMDFVLWKMSKAGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 236
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F
Sbjct: 237 PHHENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYF 296
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIA 356
++ HYRS +NYSE L A+ +L RLY A++ +P E RF+
Sbjct: 297 LMSGHYRSQLNYSEENLKQARAALERLYTALRGTDRSVPAAG-------GEAFEARFVEV 349
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 350 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDVFLQSG 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WR
Sbjct: 410 AQADDGEVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WR 463
Query: 471 R 471
R
Sbjct: 464 R 464
>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 465
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/481 (47%), Positives = 297/481 (61%), Gaps = 31/481 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 4 SMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGY 63
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
++ YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I
Sbjct: 64 NLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIH 123
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+ + +KLI G AY +NG DV +SV YG LS + L + + K
Sbjct: 124 EIIDITQKLIERGHAYVADNG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVK 179
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL F
Sbjct: 180 RNPMDFVLWKMSKAGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 236
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F
Sbjct: 237 PHHENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYF 296
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAI----KDIPKINYKKIIDLNEPHAKRFIIA 356
++ HYRS +NYSE L A+ +L RLY A+ K +P E RF+
Sbjct: 297 LMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVPAAG-------GEAFEARFVEV 349
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNN 410
MNDDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 350 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDLFLQSG 409
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WR
Sbjct: 410 AQADDGEVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WR 463
Query: 471 R 471
R
Sbjct: 464 R 464
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 301/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L++Q PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY NGDV +SV + +YG LS + L E + K++
Sbjct: 122 IELTERLIARNHAYV----AANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D+N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRG---------TDVNAAPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQADGDEVAK-----IEALIKQRNDARTSKDWALADSARDQLNELGIVLEDGPQG-TVWR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|334123097|ref|ZP_08497127.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333391213|gb|EGK62333.1| cysteine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 461
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/479 (47%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ EKLI G AY +NG DV +SV YG LS + L + + K++
Sbjct: 122 IEITEKLIERGHAYVADNG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NYSE L A+ +L RLY A++ +P E RF+ MN
Sbjct: 295 SGHYRSQLNYSEENLKQARAALERLYTALRGTDRSVPAAG-------GEAFEARFVEVMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDVFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 408 ADDGEVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|348028897|ref|YP_004871583.1| cysteinyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
gi|347946240|gb|AEP29590.1| cysteinyl-tRNA synthetase [Glaciecola nitratireducens FR1064]
Length = 462
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/476 (46%), Positives = 305/476 (64%), Gaps = 22/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +RKK+ F P+ KV LYVCGIT YD CH+GHAR + FDI+ R+LR YDV
Sbjct: 2 LQIYNTLTRKKEPFTPLVENKVGLYVCGITVYDLCHMGHARTYLSFDIMVRYLRHAGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A NNE+ LT R I ED +++ PD +P T ++ +I
Sbjct: 62 NYVRNITDVDDKIIQRAIANNETPDELTKRTIAMMHEDFASINLTEPDIEPRVTEHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ +I++LI AYQ +GDV + V ++ YG+LS + +S N E ++ K D
Sbjct: 122 VDVIQRLIEKKHAYQ----APSGDVLFDVSSYEQYGRLSKQDLSQLNAGARVETSSDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K ++P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKSAKPDEP---SWASPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMH+G V++++ KMSKS GNF T+RD+LK ++PE +RFF++
Sbjct: 235 HENEIAQSCCAFDTPYVNTWMHAGMVQVDDVKMSKSLGNFFTLRDVLKVHDPETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNE-PHAKRFIIAMNDD 360
+HYRS ++YS+ ++ AK L RLY +++DI P + +DL + + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDSISQAKAGLERLYTSLRDITPNMG----VDLAQGGYLARFEAAMNDD 350
Query: 361 FNTPVAISILFDLANIINKNKSIKMAKQLRG----LGNWLGLLEYSSDEFLKNNIYTERK 416
FN PVA S+LFD+A +NK +A L G LG LG+L+ + ++L+ N+ E
Sbjct: 351 FNMPVAFSVLFDVAKDLNKASDPAVANDLAGILKKLGAILGILQMAPSDYLQGNLGGEEG 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
++ ++ I R+ AR K++ AD R L G++LED P+G T WR++
Sbjct: 411 DDLAAK---VEALIEQRNTARANKDWPMADAARDGLNEIGVVLEDGPSGTT-WRKV 462
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD++ R+LR + Y+V
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +N ES ++LT R I D L+++ PD++P AT ++P+I
Sbjct: 62 NFQRNITDVDDKIIKRAAENKESCESLTERLIGEMHRDFDALNMKRPDFEPRATLHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ M+EKLI AY + NG DV +SV +F YG+LSG+ I E + K+D
Sbjct: 122 IDMVEKLIEKDHAYVSGNG----DVLFSVSSFPEYGRLSGQNIEQLQAGARVEVEDTKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WGAGRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V I+ +KMSKS NF TIRD+L Y+ IR+F+L
Sbjct: 235 HENEIAQSCCAHDTSYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAGTIRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L AK +L RLY ++K + + D +E AK F AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDL--SVESADASEFVAK-FKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++ IN+ K +A +L+ L LGLLE D F K
Sbjct: 352 TPEAYSVLFEMVREINRVKGSDIAAASALGVKLKELAEVLGLLEQDVDTFFKG------- 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + I+ I R+ AR K++ AD R L G+ILED P+G T WR+
Sbjct: 405 EGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILEDGPSGTT-WRK 458
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 302/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LTSR + +D L+++ PD +P AT++IP+I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTSRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 134 IELTERLIARDHAYVASNG----DVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRN 189
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 190 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 246
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 247 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 306
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 307 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGAEFEARFRAA 357
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++
Sbjct: 358 MDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQSG 417
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 418 AQTDDDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WR 471
Query: 471 R 471
R
Sbjct: 472 R 472
>gi|392977950|ref|YP_006476538.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323883|gb|AFM58836.1| cysteinyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 461
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + EKLI G AY +NG DV +SV YG LS + L + + K++
Sbjct: 122 IDITEKLIARGHAYVADNG----DVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RF+ MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEAA---GGEAFEARFVEVMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALINARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 301/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY NGDV +SV + +YG LS + L E + K++
Sbjct: 122 IELTERLIAREHAYV----AANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRG---------TDANATPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ M A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQTDDDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQG-TIWR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|398881211|ref|ZP_10636220.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM67]
gi|398885917|ref|ZP_10640815.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM60]
gi|398190239|gb|EJM77474.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM67]
gi|398191403|gb|EJM78596.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM60]
Length = 460
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/474 (46%), Positives = 292/474 (61%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ V +YVCG+T YDYCH+GH R M+ FD+V RWLR + Y++
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNNVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDI+DKII AK+N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIEDKIINRAKENGEPFDVLTERMITAMHEDEARLNILKPDMEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E + K+D
Sbjct: 122 QTMIQTLIDKGYAYAPGNG----DVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDESKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P + E +RF MNDDF
Sbjct: 295 SSHYRSAINYSEDNLKDAKGALERFYHALKGLPTVAPAG----GEAFVERFTQVMNDDFG 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LF++ IN+ + +A +L+ L + LG+L+ +D+FL+ +
Sbjct: 351 TPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E D + AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GRVDAAEVDALIAAR--LAARAGKDWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|399116372|emb|CCG19177.1| cysteinyl-tRNA synthetase [Taylorella asinigenitalis 14/45]
Length = 483
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 302/493 (61%), Gaps = 36/493 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IY+S +R+KQ P+ P K+ +YVCGIT YD+CHLGHAR+++ FD++ RWLR+ Y+V
Sbjct: 1 MQIYDSLTRQKQDLKPVEPNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRLKGYEV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A N+ + +T + A D L + PPDY+P AT ++ +
Sbjct: 61 KYVRNITDIDDKIIKKAVATNKKLSDVTKFYTDAMHADERALGVLPPDYEPRATQHVSGM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNNF 179
L++I+KL GLAY++ + DVN+SVR F YGKLSGR + S ++E
Sbjct: 121 LEIIKKLESKGLAYKSEDN----DVNFSVRKFEPYGKLSGRSLDDMRSGERVAVSEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLK
Sbjct: 174 KQDPLDFVLWKAAKETEPEDSKWESSYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDLK 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIR---------DLLK 290
FPHHENEIAQSEGAY+ WMH G + ++N KMSKS GNF TIR D
Sbjct: 234 FPHHENEIAQSEGAYEIDLARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGDISDDES 293
Query: 291 KYN-----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK--DIPKINYKKII 343
YN E++RFFI+R+HYRS N++ L A+ SL R Y + DI + I
Sbjct: 294 DYNYNVREAEMLRFFIVRNHYRSAQNFTPDNLIDAQSSLDRFYQTLSNFDIEDVQ----I 349
Query: 344 DLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSS 403
D + A +F AM+DDFNT +AISILF+L INK KS ++ L LG LGL
Sbjct: 350 DWSNQFASKFKQAMDDDFNTSLAISILFELNTEINKTKSKELLNLLVALGRVLGLFVIEP 409
Query: 404 DEFLKNNIYTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ + + + + N S+++I+ I R A+ KNF AD+IR++L GI
Sbjct: 410 KLYFRTSTRYSKVQISNSNIDSLSDSEIEQLILDRKSAKTNKNFKAADEIREKLKRAGIE 469
Query: 459 LEDMPNGKTEWRR 471
LED P G T WRR
Sbjct: 470 LEDKPGGITNWRR 482
>gi|116049743|ref|YP_791450.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296389817|ref|ZP_06879292.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
gi|416874360|ref|ZP_11918090.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
gi|421175079|ref|ZP_15632776.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
gi|122258854|sp|Q02KT6.1|SYC_PSEAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|115584964|gb|ABJ10979.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|334843369|gb|EGM21959.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
gi|404533032|gb|EKA42885.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
Length = 460
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 294/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N+E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENDEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVEKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ I K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGIDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R GIILED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNEARTAKDWAAADAARNASTKMGIILEDGPNGTT-WRK 468
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 293/475 (61%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TL IY++ S+ K F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR Y+
Sbjct: 2 TLSIYSTLSKSKDAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII A +N ES + L +R I A ED L++ PD +P AT++I
Sbjct: 62 LTYVRNITDIDDKIIKRANENGESFQDLVARMIAAMHEDEARLNVLRPDIEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHAMIQTLIDKGFAYAPGNG----DVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ E +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKGALERFYNGLKGLPEAAPAG----GEALVERFGAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L LG+L+ + FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLRDSDLNAAAALAARLKELAGVLGVLQLDPEAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIGARLAARAEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|420257596|ref|ZP_14760352.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515001|gb|EKA28780.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 461
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 300/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI AY NGDV +SV + +YG LS + L E + K++
Sbjct: 122 IALTERLIARNHAYV----AANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQTDDDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|336316096|ref|ZP_08570998.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
gi|335879586|gb|EGM77483.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
Length = 459
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/480 (46%), Positives = 310/480 (64%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +RKK+ F P+ PGKVS+YVCGIT YD+CH+GHAR + FD++ R+LR + YDV
Sbjct: 2 LQIFNTLTRKKESFVPLVPGKVSMYVCGITIYDFCHVGHARTYVAFDVMNRYLRFSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ES LT+R+ A +D L + P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRANENGESCDALTARYTVAMHDDFKALGLMPADIEPRVTTHMAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+++IE L+ G AY ++G DV + V + YG+LS N + + E +
Sbjct: 122 IELIETLVAKGYAYIASDG----DVLFDVSKYEAYGQLS----QQNLDMLQSGARVEIDQ 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K DPLDF LWK++K N+P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL
Sbjct: 174 AKDDPLDFVLWKMAKPNEP---SWSSPWGEGRPGWHIECSAMSAKHLGKHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VN W+H+G V+++ +KMSKS GNF T++D+L YN E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNTWIHTGMVQVDKEKMSKSLGNFFTVKDVLADYNAEAVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAM 357
+F++ SHYRS +NYS L A +L RLY A++++ P + +D+N + K F AM
Sbjct: 291 YFLISSHYRSQLNYSAENLLQAHSALGRLYTALREVKPAAD----VDMNNDYVKTFSAAM 346
Query: 358 NDDFNTPVAISILFDLANIINKNKSIKMAK--QLRG----LGNWLGLLEYSSDEFLKNNI 411
+DDFNT +A+ +LF+LA INK K+ AK QL G LG+ +G+L+ ++ FL++
Sbjct: 347 DDDFNTALALPVLFELARDINKEKATDPAKASQLAGLLIKLGSVMGILQGDAETFLQSGT 406
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ +I+ I R+ AR K++ AD R LV GIILED G T WRR
Sbjct: 407 DSDDVA-------EIEALIAQRNTARANKDWAAADAARDALVAKGIILEDKA-GITTWRR 458
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS SR+KQ F PITPGK+ +YVCGIT YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES LT R +D L++ PD++P AT ++P+I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCDALTERLTAEMHKDFDALNMVRPDFEPKATLHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
++M+++L+ G AY +GDV +SV ++ YG+LSG+ I E ++ K++
Sbjct: 122 IEMVQRLLDRGHAYV----APDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDHNKQN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V ++ +KMSKS GNF TIRD+LK Y+ + +R+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLKHYDAQTVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A KD+ D + +F AMNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARSALERLYTAFKDLDLTVTAAPAD---EYVTKFKSAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ IN+ K+ M ++ L + LG++ + F K +
Sbjct: 352 TPEAYSVLFDMVREINRLKTTDMGAASALGVSMKQLADVLGIVSVDIETFFKGS------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+ AR K++ AD R L G++LED NG T W++
Sbjct: 406 -GSDDEVAEIEALIVERNRARTEKDWAAADVARDRLNQLGVVLEDGENGTT-WKK 458
>gi|410088151|ref|ZP_11284848.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
gi|409765456|gb|EKN49568.1| Cysteinyl-tRNA synthetase [Morganella morganii SC01]
Length = 462
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 297/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD + R+LR YDV
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITD+DDKII A +NNE+ L R + D +++ PD +P AT++I +I
Sbjct: 62 NYIRNITDVDDKIIKRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ + L+ G AY +NG DV + + + YG LS + L E + K++
Sbjct: 122 IEITQLLLDRGHAYVADNG----DVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+PE +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NY+E L A+ +L R Y A++ K + +NE A RF AM+DDFN
Sbjct: 295 SAHYRSQLNYTEENLKQARTALERFYTALRGTDK---DAAVVVNEEFANRFRDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K M A QLR L LGLL ++FL++ +E
Sbjct: 352 TPEAYSVLFDMARELNRLKQEDMTAANGLAAQLRQLAGVLGLLTQDPEQFLQSGAQSESD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ E IK R++AR K + AD R L + GI+LED P G T WRR
Sbjct: 412 EDAAKIEALIKQ----RNDARASKEWALADAARDALTDMGIVLEDGPQGTT-WRR 461
>gi|386059314|ref|YP_005975836.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa M18]
gi|347305620|gb|AEO75734.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa M18]
Length = 460
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQSLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|401674819|ref|ZP_10806816.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217834|gb|EJO48723.1| cysteinyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 461
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/479 (47%), Positives = 294/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ EKLI G AY +NG DV +SV YG LS + L + + K++
Sbjct: 122 IEITEKLIARGHAYVADNG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGDGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NYSE L A+ +L RLY A++ +P E RF+ MN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDRSVPAAG-------GEAFEARFVEVMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ KS MA LR L LGLLE D FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSAVLGLLEQEPDAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 408 ADDGEVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|424941020|ref|ZP_18356783.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|346057466|dbj|GAA17349.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
Length = 460
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKAYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|452125633|ref|ZP_21938216.1| cysteinyl-tRNA ligase [Bordetella holmesii F627]
gi|452128994|ref|ZP_21941570.1| cysteinyl-tRNA ligase [Bordetella holmesii H558]
gi|451920728|gb|EMD70873.1| cysteinyl-tRNA ligase [Bordetella holmesii F627]
gi|451924864|gb|EMD75004.1| cysteinyl-tRNA ligase [Bordetella holmesii H558]
Length = 485
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 302/491 (61%), Gaps = 31/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K++F P+ G+V +YVCG+T YDYCHLGHAR+++ FD++QRWLR + Y V
Sbjct: 2 LHIYNTLSRTKEVFTPVHAGQVRMYVCGMTVYDYCHLGHARMLVSFDVIQRWLRASGYAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + + +T +I A D L + PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRMHEVTEYYIDAMHADERALGVARPDQEPRATEYVSEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L NGLAYQ + +GDVNYSVR F YGKLSG+ S + + E+ ++ K
Sbjct: 122 LDIIGRLQQNGLAYQAD----DGDVNYSVRGFAGYGKLSGK--SLDDLRAGERVAVDSSK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P E +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKTEEPPETKWESPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGTLANVWMHCGPLMVDADKMSKSLGNFRTIRQTISQNEGPGNRAD 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A++++P ID
Sbjct: 296 YVVNPREAEMLRFFIVRNHYRSAQNYTPDNLIDAQNALDRLYQALQNVPADTAG--IDWT 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
E A+ F AM+DDFN+ A++ LF+LA +N+ + + A QL+ L LGLL+ +
Sbjct: 354 EAQAQAFKAAMDDDFNSSGAVAALFELAGRVNRERDSRAAGQLKALAALLGLLQQEPQVY 413
Query: 407 LKN------NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ + I I R++A++ ++F AD IR EL GI L+
Sbjct: 414 FRSPTRYSAAAMQQEGAGAQLEAGQIDALIVERAQAKQARDFARADAIRGELRAAGIELD 473
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 474 DKPGGVTQWRR 484
>gi|348589979|ref|YP_004874441.1| cysteinyl-tRNA synthetase [Taylorella asinigenitalis MCE3]
gi|347973883|gb|AEP36418.1| Cysteinyl-tRNA synthetase [Taylorella asinigenitalis MCE3]
Length = 483
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/493 (45%), Positives = 303/493 (61%), Gaps = 36/493 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IY+S +R+KQ P+ P K+ +YVCGIT YD+CHLGHAR+++ FD++ RWLR+ Y+V
Sbjct: 1 MQIYDSLTRQKQDLKPVEPNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRLKGYEV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A N+ + +T + A D L + PPDY+P AT ++ +
Sbjct: 61 KYVRNITDIDDKIIKKAVATNKKLSDVTKFYTDAMHADERALGVLPPDYEPRATQHVSGM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNNF 179
L++I+KL GLAY++ + DVN+SVR F YGKLSGR + S ++E
Sbjct: 121 LEIIKKLESKGLAYKSEDN----DVNFSVRKFEPYGKLSGRSLDDMRSGERVAVSEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLK
Sbjct: 174 KQDPLDFVLWKAAKETEPEDSKWESSYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDLK 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLL---------K 290
FPHHENEIAQSEGAY+ WMH G + ++N KMSKS GNF TIR L
Sbjct: 234 FPHHENEIAQSEGAYEIDLARIWMHCGPLMVDNDKMSKSLGNFKTIRQTLAVGDISDDES 293
Query: 291 KYN-----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK--DIPKINYKKII 343
+YN E++RFFI+R+HYRS N++ L A+ +L R Y + DI + I
Sbjct: 294 EYNYNVREAEMLRFFIVRNHYRSAQNFTPDNLIDAQAALDRFYQTLSNFDIEDVQ----I 349
Query: 344 DLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSS 403
D + A +F AM+DDFNT +AISILF+L INK KS ++ L LG LG+
Sbjct: 350 DWSNQFASKFKQAMDDDFNTSLAISILFELNTEINKTKSKELLNLLVALGRVLGIFVIEP 409
Query: 404 DEFLKNNIYTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ + + + + N S+++I+ I R A+ KNF AD+IR++L GI
Sbjct: 410 KLYFRTSTRYSKVQISNSNIDSLSDSEIEQLILDRKSAKTNKNFKAADEIREKLKRAGIE 469
Query: 459 LEDMPNGKTEWRR 471
LED P G T WRR
Sbjct: 470 LEDKPGGITNWRR 482
>gi|373467538|ref|ZP_09558832.1| cysteine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758259|gb|EHO47032.1| cysteine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 459
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 306/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVAFGGEHFVATFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+ +
Sbjct: 352 TPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAGSNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R EL GI+LED NG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWAAADAARNELTIMGIVLEDGANGTT-WRK 458
>gi|15596992|ref|NP_250486.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|218892253|ref|YP_002441120.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
gi|254240136|ref|ZP_04933458.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|392984735|ref|YP_006483322.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
gi|418585574|ref|ZP_13149622.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|418591328|ref|ZP_13155227.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|419755341|ref|ZP_14281696.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|421168567|ref|ZP_15626642.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|421516434|ref|ZP_15963120.1| cysteinyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
gi|451982770|ref|ZP_21931072.1| Cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 18A]
gi|21264027|sp|Q9I2U7.1|SYC_PSEAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735063|sp|B7VB84.1|SYC_PSEA8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9947777|gb|AAG05184.1|AE004605_6 cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|126193514|gb|EAZ57577.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|218772479|emb|CAW28261.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
gi|375044263|gb|EHS36872.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049868|gb|EHS42356.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|384398038|gb|EIE44446.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|392320240|gb|AFM65620.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
gi|404350162|gb|EJZ76499.1| cysteinyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
gi|404529160|gb|EKA39210.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|451759547|emb|CCQ83595.1| Cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 18A]
Length = 460
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 295/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F P+ PGKV +YVCG+T YD CH+GH R + FD++ R+LR + YDV
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +N ES +LT R I D L++ PD +P AT ++P+I
Sbjct: 62 NFQRNITDVDDKIIKRANENKESCDSLTERLIAEMHRDFDALNMARPDNEPRATLHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+EKLI AY +NG DV +SV +F YG+LSG+ L E + K+D
Sbjct: 122 IEMVEKLIEREHAYVASNG----DVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V ++ +KMSKS NF TIRD+L Y+ +R+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLGHYDATTVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L AK L R+Y A+KD ++ E +F AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQAKSGLERIYTALKD---LDLTVEAAPAEEFVAKFKSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ IN+ K+ MAK L+ L + LG+L D F K
Sbjct: 352 TPEAYSVLFDMVREINRLKATDMAKASALGVALKQLADVLGILGQDVDTFFKG------- 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G+ILED P G T WR+
Sbjct: 405 EGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILEDGPEGTT-WRK 458
>gi|421493946|ref|ZP_15941299.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455740332|ref|YP_007506598.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
gi|400191717|gb|EJO24860.1| CYSS [Morganella morganii subsp. morganii KT]
gi|455421895|gb|AGG32225.1| Cysteinyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
Length = 462
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 297/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD + R+LR YDV
Sbjct: 2 LKIYNTLSRQKEEFKPINPGKIGMYVCGITVYDLCHIGHGRTFVAFDTIVRYLRHAGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITD+DDKII A +NNE+ L R + D +++ PD +P AT++I +I
Sbjct: 62 NYIRNITDVDDKIIRRANENNETCDQLVDRMVAEMHRDFDAMNLMRPDSEPRATHHIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ + L+ G AY +NG DV + + + YG LS + L E + K++
Sbjct: 122 IEITQLLLDRGHAYVADNG----DVMFDISSDPEYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNSKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+PE +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLGYYDPETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NY+E L A+ +L R Y A++ K + +NE A RF AM+DDFN
Sbjct: 295 SAHYRSQLNYTEENLKQARTALERFYTALRGTDK---DAAVVVNEEFANRFRDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K M A QLR L LGLL ++FL++ +E
Sbjct: 352 TPEAYSVLFDMARELNRLKQEDMTAANGLAAQLRQLAGVLGLLTQDPEQFLQSGAQSESD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ E IK R++AR K + AD R L + GI+LED P G T WRR
Sbjct: 412 EDAAKIEALIKQ----RNDARASKEWALADAARDALTDMGIVLEDGPQGTT-WRR 461
>gi|386309410|ref|YP_006005466.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240598|ref|ZP_12867136.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550489|ref|ZP_20506533.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780011|gb|EHB22100.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789624|emb|CCO69573.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 461
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 301/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L++Q PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY NGDV +SV + +YG LS + L E + K++
Sbjct: 122 IELTERLIARNHAYV----AANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D+N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRG---------TDVNAAPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L + LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ + I+ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQADGDEVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQG-TVWR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
Length = 461
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+I LT R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRAAENGETIAQLTDRMIAEMHADFASLNILSPDEEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI AY NG DV +SV YG LS + L E K++
Sbjct: 122 IELVEKLIARRHAYVAENG----DVMFSVDTAPGYGVLSRQDLEQLKAGARVEIAEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKLNEP---SWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMH+G V ++ +KMSKS NF T+RD+L Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTVRDVLAHYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDESASPA---GGEAFEARFCTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K + +A +LR L LGLLE + FL++
Sbjct: 352 TPEAYSVLFDIARDINRLKAEDAAAANALAAELRRLAGVLGLLEQDPELFLQSG-----A 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I I R++AR+ K++ AD R L + GI+LED P G T WRR
Sbjct: 407 QPCDDEVQEIDALIKQRNDARQSKDWAAADAARNRLTDMGIVLEDGPQG-TIWRR 460
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/480 (47%), Positives = 309/480 (64%), Gaps = 33/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+N+ + KK+IF PI GKV+LYVCG+TAYD CH+GH R + FD+V R+LR Y+V
Sbjct: 2 LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDI+DKII A N ES + LT R I D LL+I PD +P AT +I +I
Sbjct: 62 NYIRNITDIEDKIIRKAANNGESCQQLTDRMIAEMHHDLDLLNILRPDKEPRATQHIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+++ +LI AY +NG DV +++ + NYG LS S N N++ +
Sbjct: 122 IQLTRQLIDKEHAYIASNG----DVMFAIESANNYGILS----SQNLNQLQIGQRVKITT 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK+ +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL
Sbjct: 174 VKRNPMDFVLWKMSKHGEP---TWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS + +VN+WMHSG V I N+KMSKS NF T+RD+LK Y+ E +R
Sbjct: 231 IFPHHENEIAQSTCMENNPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ SHYR +NYSE L A+ +L LY+A+++ K + I E ++F++AMN
Sbjct: 291 YFLISSHYRKPLNYSEKSLQLARTALKSLYIALRNTKK---EVIPSGGEYFIEQFMMAMN 347
Query: 359 DDFNTPVAISILFDLANIIN--KNKSIK----MAKQLRGLGNWLGLLEYSSDEFL-KNNI 411
+DFNTP A ++LF LA+ +N K K+IK MA LR L N LGLLE + FL K I
Sbjct: 348 NDFNTPAAHAVLFQLAHEVNRLKTKNIKSAQGMAATLRYLANILGLLEQDPEVFLQKQKI 407
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T+ N+ E +K R+ RK+ +++ADK+R++L GI+LED P G T WRR
Sbjct: 408 VTDL--NIALIEELVKQ----RNNIRKKHQWVQADKVREKLAAMGIVLEDTPQG-TIWRR 460
>gi|421080284|ref|ZP_15541218.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401705137|gb|EJS95326.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 295/481 (61%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNVTDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNIVRPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLIARRHAYVASNG----DVMFSVDTAPGYGALSRQDLDQLQAGARVEITAVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN------EPHAKRFIIA 356
HYRS +NYSE L A+ SL RLY+A++ DLN + RF A
Sbjct: 295 SGHYRSQLNYSEDNLKQARASLERLYIALRG---------TDLNVAAHGGDEFEARFREA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ N +I+ I R +AR K++ AD+ R L GI+LED G T WR
Sbjct: 406 AQVD-----NDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLEDGSQG-TIWR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|381394421|ref|ZP_09920138.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330023|dbj|GAB55271.1| cysteinyl-tRNA synthetase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 459
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/477 (46%), Positives = 302/477 (63%), Gaps = 29/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S++KQ F PI KV LYVCGIT YD CH+GHAR + FDIV R+LR ++V
Sbjct: 2 LQIYNTLSKEKQPFTPIVKNKVGLYVCGITVYDLCHMGHARTYLSFDIVLRYLRHLGFEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A++NNE+ LT R I D L++ PD +P T ++P+I
Sbjct: 62 KYVRNITDVDDKIIQRAQQNNETPGELTQRTITEMHADFAALNLLKPDVEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ +IE+LI G AYQ++ G DV + V + YGKLS + +S + I + + K D
Sbjct: 122 ITVIERLIDKGYAYQSSTG----DVLFKVNAYEGYGKLSKQDLSQLVSGIRVQTTSDKHD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K EI W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PLDFILWKGVKEG---EISWASPWGEGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V+INN+KMSKS NF T+R +L+K++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNTWMHTGMVQINNEKMSKSLDNFFTLRSVLEKHDAETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA---KRFIIAMND 359
+HYRS ++YS+ ++ A+ SL R Y +++D+ K +D+ + +F AMND
Sbjct: 295 SAHYRSQLSYSQENIDQARASLERFYTSLRDV-----KANVDVEMSYGGYLAKFEAAMND 349
Query: 360 DFNTPVAISILFDLANIINK-----NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
DFN PVA+++LFD+ +NK +++ A LR LG LG+LE ++FL+ ++ +
Sbjct: 350 DFNMPVAVAVLFDIVKDLNKLDSNSDEAKDTAGALRHLGKILGILENEPEQFLQGDLSQD 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R +AR KN+ AD IR EL G+ILE+ G T WR+
Sbjct: 410 LTAQ-------IEALIAKRIQARTDKNWASADAIRDELSALGVILEESKTGTT-WRK 458
>gi|388546517|ref|ZP_10149792.1| cysteinyl-tRNA ligase [Pseudomonas sp. M47T1]
gi|388275500|gb|EIK95087.1| cysteinyl-tRNA ligase [Pseudomonas sp. M47T1]
Length = 460
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/474 (48%), Positives = 296/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ ++ K++F P+ KV +YVCG+T YD+CH+GH R MI FD+V RWLR + YD+
Sbjct: 2 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDFCHIGHGRSMIAFDLVTRWLRHSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDLEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F+ YGKLS + I E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFVGYGKLSRKKIEDLRIGARIEVEEAKQD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK K P E W S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGVK---PGEPSWESPWGPGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + N WMH G ++IN +KMSKS GN+ TIRD+L KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGQPYANAWMHCGMIRINGEKMSKSLGNYFTIRDVLAKYHPEVVRYLLV 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS+INYSE L +K +L R Y A+K +P + E + RF AMNDDF
Sbjct: 295 ASHYRSSINYSEDSLRESKGALERFYHALKGLPNVAAAG----GEEYVARFTDAMNDDFA 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFDL IN+ + + +A +LR LG LG+L+ +DEFL+ +
Sbjct: 351 TPEACAVLFDLVREINRLRDSDVDAAAGLAGRLRELGGLLGVLQLEADEFLRAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ ++ D + R AR K++ E+D+IR +L G++LED G T WR
Sbjct: 407 GKVDAAQVDALIAA--RLAARAGKDWAESDRIRDQLTAMGVVLED-SKGATTWR 457
>gi|333900431|ref|YP_004474304.1| cysteinyl-tRNA synthetase [Pseudomonas fulva 12-X]
gi|333115696|gb|AEF22210.1| cysteinyl-tRNA synthetase [Pseudomonas fulva 12-X]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 292/475 (61%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ S+ K+ F P+ V +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT +I
Sbjct: 62 VTYVRNITDIDDKIIKRANENGEPFEALVERMIAAMHEDEGRLNVLRPDIEPRATGHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ +MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHQMIQTLIDKGYAYAPGNG----DVYYRVTKFETYGKLSRRKIDELKIGARIEVDEVKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKAAKPGEP---SWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEESLREAKGALERFYNGLKGLPQAQPAG----GAAFVERFAAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ IN+ + +A QL+ L LG+L+ D FLK
Sbjct: 351 NSPEACAVLFEMIREINRLRESDLQAAAGLAAQLKALAGLLGVLQLEPDAFLKAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R +AR KN+ E+D+IR ++ G++LED G T WR
Sbjct: 407 EGKVDAAE--VEALIAARLQARADKNWAESDRIRDQITALGVVLEDGKGGTT-WR 458
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9.1|SYC_YERE8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 300/481 (62%), Gaps = 35/481 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI AY NGDV +SV + +YG LS + L E + K++
Sbjct: 122 IALTERLIARNHAYV----AANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHA------KRFIIA 356
HYRS +NYSE L A+ SL RLY A++ D N A RF A
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGT---------DANATPAGGAEFEARFRAA 345
Query: 357 MNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNN 410
M+DDFNTP A S+LFD+A +N+ K+ +A +LR L LGLLE + FL++
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANALAAELRKLAYVLGLLEQDPELFLQSG 405
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
T+ + I++ I R++AR K++ AD R +L GI+LED P G T WR
Sbjct: 406 AQTDDDEVAK-----IEVLIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WR 459
Query: 471 R 471
R
Sbjct: 460 R 460
>gi|399545485|ref|YP_006558793.1| cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
gi|399160817|gb|AFP31380.1| Cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
Length = 480
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/476 (45%), Positives = 298/476 (62%), Gaps = 20/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+RIYN+ S+KK+ F PI PGKV LYVCG+T YDYCHLGHAR+++ FD++ R+LR + +DV
Sbjct: 16 IRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARILVAFDVITRYLRHSGFDV 75
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKI+ A +N E LT R I A ED L + P+ +P AT +I +
Sbjct: 76 NYVRNITDIDDKILRRAAENGEVYTDLTERMIAAMHEDEARLGVLLPNAEPRATAFISDM 135
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
+ MI+ LI AY +NG DV +SV +F +YGKLS + + + K+
Sbjct: 136 IAMIKTLIAGDHAYAADNG----DVYFSVSSFADYGKLSRKKLEDLLAGARVDVEQAKRS 191
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DFALWK +K P E+ W S WG GRPGWHIECSAM+ + LG FD+HGGG DL FPH
Sbjct: 192 PADFALWKAAK---PDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDLHGGGPDLLFPH 248
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A H FVN WMH+G +++N +KMSKS GNF TIR++++ Y EV+R+F++
Sbjct: 249 HENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMETYPAEVVRYFLV 308
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS ++YSE L + +SL +LY A++ + + + H F M+DDFN
Sbjct: 309 SSHYRSQVDYSEDNLIESGRSLTKLYNALRGVTPLASDAVA--RTSHDTLFDKRMDDDFN 366
Query: 363 TPVAISILFDLANIINKNK-------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
A++IL LA +N+ + + A L LG+ LGLL+ + F +++ +
Sbjct: 367 CAGAMAILHALAGEMNQQRRDGDEQAAAASATVLVRLGSILGLLQQDPELFFQSD--SGS 424
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ S I+ I R++ARK ++F AD+IR EL+ +IL+D G T WRR
Sbjct: 425 GEGNELSAEQIETMIQSRADARKTRDFAGADQIRDELLTRRVILDDSREG-TSWRR 479
>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
Length = 461
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR YDV
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+I LT R I D L+IQ PD +P AT+YI +I
Sbjct: 62 KYVRNITDIDDKIIKRATENGETITQLTDRMIGEMHTDFDALNIQRPDEEPRATHYIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI AY NNG DV +SV YG LS + L E K++
Sbjct: 122 IELVEQLIARRHAYVANNG----DVMFSVDTAPGYGALSRQDLEQLKAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMH+G V ++ +KMSKS NF T+RD+L Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHTGMVMVDREKMSKSLNNFFTMRDVLMHYDAETIRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ SL RLY A++ D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFE---SRFRDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDAAAANGLAAALRRLAGVLGLLEQDPELFLQSGAQAD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR+ K++ AD R L GI+LED P G T WRR
Sbjct: 410 ---DGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLEDGPQG-TIWRR 460
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/487 (46%), Positives = 298/487 (61%), Gaps = 33/487 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +RKK+ F P P + +YVCG+T YDYCH+GHAR ++FDI+ R+L Y+V
Sbjct: 3 LKIFNTMTRKKEDFKPRNPNRTGMYVCGVTVYDYCHIGHARSQVLFDIIFRYLMFKGYEV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN TDIDDKII A + K L +F++ D L + P +P AT +I QI
Sbjct: 63 TYVRNFTDIDDKIINRANELKIDWKELAEKFVREFYVDMDALGVLRPTREPKATEFIAQI 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+I KL+ AY ++GDV +SV +F YGKLSG+ L+S +NEK
Sbjct: 123 QALIAKLVEGKYAYT-----VDGDVMFSVASFPEYGKLSGKKVDELMSGARVDVNEK--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
KK+PLDFALWK +K +P W S WG GRPGWHIECSAMS + LG HFDIHGGG DL
Sbjct: 175 KKNPLDFALWKAAKPGEP---SWESPWGPGRPGWHIECSAMSMFYLGQHFDIHGGGADLT 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FVNYW+H+GFV I +KMSKS GN IRD+LK +PE +R
Sbjct: 232 FPHHENEIAQSEAATGETFVNYWVHNGFVNIRAEKMSKSLGNVLNIRDILKTVHPEALRH 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH-----AKRFI 354
F+L SHYRS ++YS+ ++ + +L RLY A+ + ++ + + P +RF
Sbjct: 292 FLLTSHYRSPLDYSDAFVKESSTALERLYAAMAALDELIEARGTSDDLPQELTGIEERFS 351
Query: 355 IAMNDDFNTPVAISILFDLANIINK---NKSIKMAKQLRGLGN--------WLGLLEYSS 403
AM+DDFNTP A++ILF+ A IN+ S+ + LR + + LG+L
Sbjct: 352 EAMDDDFNTPRALAILFEAARTINRISGTNSVPKPELLREVKDRILHVAREVLGILREDQ 411
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
EFL+ + SE I+ I R+EARK KNF AD+IR EL + GI+LED P
Sbjct: 412 TEFLE-RARKAGAPELGISEELIQQYIVERAEARKSKNFARADEIRNELASKGIVLEDTP 470
Query: 464 NGKTEWR 470
G T W+
Sbjct: 471 KG-TIWK 476
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 301/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 14 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 73
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNE+ + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 74 TYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNLERPDLEPRATHHIPEI 133
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 134 IELTERLIAREHAYVASNG----DVMFAVDSDPDYGLLSRQDLDQLQAGARVEIADVKRN 189
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 190 PMDFVLWKMSK---PGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 246
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L+ Y+ E +R+F++
Sbjct: 247 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEYYDAETVRYFLM 306
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + RF AM+DDFN
Sbjct: 307 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDVHAAPAGGAEFEARFRAAMDDDFN 363
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA +N+ K+ +A +LR L + LGLLE + FL++ ++
Sbjct: 364 TPEAYSVLFDLAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSGAQSDGD 423
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 424 EVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQGTT-WRR 472
>gi|429090689|ref|ZP_19153399.1| Cysteinyl-tRNA synthetase [Cronobacter dublinensis 1210]
gi|426744860|emb|CCJ79512.1| Cysteinyl-tRNA synthetase [Cronobacter dublinensis 1210]
Length = 461
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I P+ +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHKDFDALNILRPESEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDSSVAAAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE + ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDSHAANQLAAHLRKLAAVLGLLEQAPEQFLQSGAQANDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIVKRLEARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|354722388|ref|ZP_09036603.1| cysteinyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 461
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/479 (47%), Positives = 293/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + EKLI G AY NG DV +SV YG LS + L + + K++
Sbjct: 122 IDITEKLIARGHAYVAENG----DVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NYSE L A+ +L RLY A++ +P E RF+ MN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDRSVPAAG-------GEAFEARFVEVMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 408 ADDGEVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|355644123|ref|ZP_09053628.1| cysteinyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
gi|354829290|gb|EHF13366.1| cysteinyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEVFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511836|sp|C4K6G8.1|SYC_HAMD5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 461
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/475 (48%), Positives = 303/475 (63%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+F+RKK++F PI P V +YVCG+T YD CH+GHAR +VFD+V R+LR Y +
Sbjct: 2 LKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N++S + LT++ +K D L++ PD +P AT +I ++
Sbjct: 62 TYVRNITDIDDKIIQRASQNHQSCEALTAQMLKEMYRDFDELNLLRPDLEPRATEHITEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + ++L+ AY NGDV +SV +YG LS + L E K
Sbjct: 122 ITLTQQLLDQKYAYV----AANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVMESKHH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P+ W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEPH---WPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A+K +VN WMHSG + IN +KMSKS NFCTIRDLL++Y+PE +R+F+L
Sbjct: 235 HENEMAQSICAHKAPYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLLQRYDPETLRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NY+E L A+ +L RLY A++D N K + E KRF+ AMNDDFN
Sbjct: 295 SAHYRSPLNYTEENLKQARIALTRLYTALRDT---NQKAFPEGGESFEKRFVSAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFD A INK K + +A QLR +G LGLLE S L N +
Sbjct: 352 TPEAYAVLFDTAREINKLKKEHPKAADGLAAQLRKMGKVLGLLESGSLLSLLNP-----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ + +I I R+ AR KN+ EAD R L G+++ED NG T WRR
Sbjct: 407 KDDRHQSAEIADLIEKRNLARAHKNWEEADNARTRLFEMGVVVEDTENG-TNWRR 460
>gi|313110488|ref|ZP_07796373.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
gi|386065637|ref|YP_005980941.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310882875|gb|EFQ41469.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
gi|348034196|dbj|BAK89556.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/477 (47%), Positives = 293/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A ++LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACAVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/479 (45%), Positives = 297/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +R+K+ F PI PGKV +YVCG+T YD CH+GH R + FD++ R+LR YDV
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +N ES LT R + D L+++ PD++P AT ++P+I
Sbjct: 62 NFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
++M+E+L+ AY +NG DV +SV +F YG+LSG+ N +++ E +
Sbjct: 122 IEMVERLLERDHAYIADNG----DVLFSVASFPEYGRLSGQ----NLDQLQAGARVEVDE 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DP+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 NKRDPMDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS NF TIRD+L Y+ +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L AK +L RLY A+K ++ + +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQAKAALERLYTALK---GLDLSVEAAPASEYVAKFKEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A IN+ K +A ++ LG+ LG+LE D F K
Sbjct: 348 DDFNTPEAYSVLFDMAREINRLKVDDLAAASALGVSMKQLGDVLGILEQDVDGFFKGEGS 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+ AR K++ AD R L G+ILED P G T WR+
Sbjct: 408 DDEVAQ-------IEALIAERNRARTEKDWAAADVARDGLNALGVILEDGPEGTT-WRK 458
>gi|254234889|ref|ZP_04928212.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
gi|420140231|ref|ZP_14648002.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa CIG1]
gi|421161270|ref|ZP_15620230.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|421181108|ref|ZP_15638626.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa E2]
gi|126166820|gb|EAZ52331.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
gi|403246970|gb|EJY60655.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa CIG1]
gi|404540217|gb|EKA49631.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|404544336|gb|EKA53525.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa E2]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 292/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAK---PGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGKGGTT-WR 457
>gi|377555852|ref|ZP_09785580.1| cysteinyl-tRNA synthetase [endosymbiont of Bathymodiolus sp.]
Length = 434
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/442 (50%), Positives = 291/442 (65%), Gaps = 19/442 (4%)
Query: 40 LGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQ 99
+GHAR++++FD++ R LR + V YVRNITDIDDKII A +N E I LT+RFI A
Sbjct: 1 MGHARVLVMFDVITRHLRRHFPQVEYVRNITDIDDKIIQRAVENKEDIYALTNRFIAAMH 60
Query: 100 EDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYG 159
ED L I PPD +P AT+ I Q+ MIE LI G+AYQ GK NGDV YSVR F NYG
Sbjct: 61 EDEQALGILPPDIEPRATDAIDQMFYMIESLIEKGIAYQ---GK-NGDVYYSVRKFKNYG 116
Query: 160 KLSGRLISS--NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIEC 217
KLSG+ + ++N + + K+DPLDF LWK++K N+P W S WG GRPGWHIEC
Sbjct: 117 KLSGKNLDELEAGARVNIETS-KQDPLDFVLWKMAKPNEP---SWQSPWGDGRPGWHIEC 172
Query: 218 SAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSK 277
SAMSC LG HFDIHGGG DL FPHHENEIAQSEGA FVN WMH GFV INN+KMSK
Sbjct: 173 SAMSCTHLGKHFDIHGGGMDLAFPHHENEIAQSEGANDCTFVNTWMHVGFVNINNEKMSK 232
Query: 278 SFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PK 336
S NF TIR +L+ Y+ E +R+FI+ SHYRS +N+S+ L+ AK SL RLY A + +
Sbjct: 233 SLNNFFTIRGVLENYDGETLRYFIMSSHYRSPLNFSDENLDNAKASLTRLYTATRGLSAS 292
Query: 337 INYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN------KNKSIKMAKQLR 390
+ + + R A++DDFNTP+A+SILF+LA ++N +++ + + L+
Sbjct: 293 AAATEEVSQRFDYEARLTAALDDDFNTPIALSILFELAKVVNAKRKKDSDQANALGQLLK 352
Query: 391 GLGNWLGLLEYSSDEFLKNNIY-TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIR 449
LG ++G+L+ D FLK+ + K+ V S+ I KI R++AR KNF +D+IR
Sbjct: 353 KLGGYIGILQMEGDVFLKHTSQGSTEKRGVGLSDTQIDAKIDKRNQARNNKNFNLSDQIR 412
Query: 450 QELVNNGIILEDMPNGKTEWRR 471
EL GIILED + T WRR
Sbjct: 413 DELAELGIILEDNADATT-WRR 433
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKHALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVQKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+E+R K++ AD R L GIILED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNESRATKDWAAADAARNALTEMGIILEDGPNGTT-WRK 468
>gi|444380435|ref|ZP_21179568.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
gi|443675462|gb|ELT82191.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
Length = 460
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 299/475 (62%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS ++KK+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIYNSLTKKKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRFLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+VRNITDIDDKII A +N ES +LT R I D L+++ PD +P AT +I +I
Sbjct: 62 KFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMYADFDALNMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI G AY +NG DV + V F YGKLS + L + KK
Sbjct: 122 IALVERLIERGFAYVASNG----DVLFEVAKFDEYGKLSRQDLDQLQAGARVDVEEAKKS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ S+ RLY +++ ++ + E +RF +AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASMERLYTSLR---GLDLSATAEGGEEFIERFKVAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K + K+A ++R L LGLLE + FL+ N + +
Sbjct: 352 TPEAYSVLFDMAREINRLKAEDVEGASKLAARMRELAEVLGLLEQDPEAFLQGNAGGDDE 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR K++ AD R L GI+LED G T WRR
Sbjct: 412 V------VEIEALIKARNDARASKDWAAADAARDALTAMGIVLEDGAAGTT-WRR 459
>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R I FD+V R+LR Y +
Sbjct: 2 LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + D L+I P+ +P AT +IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVALVDRMVAEMHNDFDALNILRPESEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+LI G AY NG DV ++V + +YGKLS + L E + K++
Sbjct: 122 IEIVEQLIARGHAYVAGNG----DVMFAVESDADYGKLSRQDLEQLQAGARVEVADSKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDR---SVAAAGGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL++ T
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSGAQTNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIVKRLEARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|345298190|ref|YP_004827548.1| cysteinyl-tRNA synthetase [Enterobacter asburiae LF7a]
gi|345092127|gb|AEN63763.1| cysteinyl-tRNA synthetase [Enterobacter asburiae LF7a]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+IQ PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + EKLI G AY +NG DV +SV YGKLS + L + + K++
Sbjct: 122 IDITEKLIERGHAYVADNG----DVMFSVPTDPAYGKLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RF+ MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDK---SVAAAGGEAFEARFVEVMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EAR+ K++ AD R L GIILED G T WRR
Sbjct: 412 EVA-----EIEALIKARLEARQAKDWAAADAARNRLTEMGIILEDGAQGTT-WRR 460
>gi|354596705|ref|ZP_09014722.1| cysteinyl-tRNA synthetase [Brenneria sp. EniD312]
gi|353674640|gb|EHD20673.1| cysteinyl-tRNA synthetase [Brenneria sp. EniD312]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E+ LT+R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNVTDIDDKIIKRAAENGETCDQLTTRMIAEMHADFDALNILRPDEEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ LI AY +NG DV +SV YG LS + L E K +
Sbjct: 122 IELVKALIARRHAYVASNG----DVMFSVATARGYGALSRQDLDQLQAGARVEITEVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK SK +P+ W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKKSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSTSAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + ++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDSSVEAQGGEIFEA---RFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ ++A LR L LGLLE + FL++ T+
Sbjct: 352 TPEAYSVLFDMARDINRLKTEDPHEANQLASALRKLAKVLGLLEQDPEVFLQSGAQTD-- 409
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR+ K++ AD+ R L GIILED P G T WRR
Sbjct: 410 ---DAEVREIEGLIKQRKDARQAKDWALADQARDRLNEMGIILEDGPQG-TIWRR 460
>gi|417850906|ref|ZP_12496721.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338220217|gb|EGP05763.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 304/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARTAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/480 (45%), Positives = 293/480 (61%), Gaps = 33/480 (6%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L ++N+ +R+K+ F P G+V +YVCG+T YD CH+GHAR + FD+V R+LR YD
Sbjct: 2 ALTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITD+DDKII A +N E LT R+I D L++ PD +P T ++
Sbjct: 62 VTYVRNITDLDDKIIKRAAENGEPFDALTQRYIDEMHRDFAALNLLEPDVEPRVTQHMDD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
I++MIE L+ G AYQ +NG DV + V F +YG+LS N ++
Sbjct: 122 IIRMIESLVTQGYAYQADNG----DVLFDVSTFDDYGRLS----RQNLEQLQAGARVDVE 173
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K DPLDF LWK +K +P W+S WG GRPGWHIECSAM+ LG FDIHGGG D
Sbjct: 174 ASKLDPLDFVLWKKAKAGEP---SWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSD 230
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQS A + +VNYWMHSG V++++ KMSKS GNF TIRD+L Y+ E +
Sbjct: 231 LTFPHHENEIAQSCCANQTNYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLNAYDAETV 290
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAM 357
R+F+L SHYRS +NY++ L A +L RLY A++ + + +L P+ +F AM
Sbjct: 291 RYFLLSSHYRSQLNYTQDNLEQAHAALERLYTALRGLTPEQPDE--NLRLPYWNQFTDAM 348
Query: 358 NDDFNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNI 411
NDDFN P A+S+LF+L INK ++ ++A L L + LGLL+ S + FL+
Sbjct: 349 NDDFNAPEAMSVLFELVREINKARDNDAERAAQLAHVLVELADVLGLLQQSPESFLQGGA 408
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E I+ I R++AR K++ AD+ R L GI+LED NG T+WRR
Sbjct: 409 DDEVAL--------IEALIAQRNKARAEKDWAAADEARDRLTEMGIVLEDGANG-TQWRR 459
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 305/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVQKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+E+R K++ AD R L GIILED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNESRATKDWAAADAARNALTEMGIILEDGPNGTT-WRK 468
>gi|425065810|ref|ZP_18468930.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
gi|404383305|gb|EJZ79759.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 304/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|417853615|ref|ZP_12498974.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338219221|gb|EGP04909.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 459
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 304/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVVLIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|387890094|ref|YP_006320392.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414592245|ref|ZP_11441897.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386924927|gb|AFJ47881.1| cysteinyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403196768|dbj|GAB79549.1| cysteinyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 461
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRFLGYRL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ L R I +D L+I PPD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIRRASENGEAFTDLVDRMIGEMHKDFAALNILPPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +SV YG LS + L E + K++
Sbjct: 122 IEITEQLIARGHAYVADNG----DVMFSVPTDPGYGVLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWTSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDK---EAAPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +MA +R L + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDMAQANQMAAHMRKLASVLGLLEQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/479 (45%), Positives = 299/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YN+ +R+K+ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR + Y+V
Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES +LT R I D L++ PD++P AT ++P+I
Sbjct: 62 NFQRNITDVDDKIIKRANENNESCDSLTERLIGEMHRDFDSLNMARPDFEPRATLHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+EKLI AY NGDV +SV +F YG+LSG+ L E + K+D
Sbjct: 122 IEMVEKLIAREHAYV----AANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVEDAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VNYWMH+G V ++ +KMSKS NF TIRD+L Y+ +R+F+L
Sbjct: 235 HENEIAQSCCAHDTKYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAATVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII----AMN 358
HYRS +NYSE L AK L R+Y A+KD+ + ++ A+ FI AM+
Sbjct: 295 SGHYRSQLNYSEENLKQAKSGLERIYTALKDLD-------LTVDAAPAEAFIAQFKRAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LF++ IN+ K M + L+ L + LG+L D F K
Sbjct: 348 DDFNTPEAYSVLFEMVREINRLKLTDMQQASALGVALKQLADVLGILGQDVDTFFKG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G+ILED P G T WR+
Sbjct: 405 ----EGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILEDGPEGTT-WRK 458
>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
Length = 461
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 299/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+IQ PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVERMIAEMHKDFDALNIQRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L + LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLASVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 301/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR + YD+
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I D L ++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI G AY +NG DV + V F +YG+LS + L + K+
Sbjct: 122 IALCERLIERGFAYVASNG----DVMFEVSKFEDYGRLSKQDLDQLQAGARVDIETAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ ++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTSLR---GLDTSVEAAGGEEFVARFKEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A ++R L + LGLL + FL+
Sbjct: 352 TPEAYSVLFDMAREINRLKADDVAAASVLGARMRELADVLGLLSQEPETFLQGGA----G 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ + +E I+ I R +AR K++ AD+ R +L+ GIILED G T WRR
Sbjct: 408 EDDDVAE--IEALIQQRLDARAAKDWAAADEARDKLMAMGIILEDGAQGTT-WRR 459
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4.1|SYC_ERWCT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/477 (46%), Positives = 295/477 (61%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI +V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT+R I D L+I PD +P AT++I I
Sbjct: 62 KYVRNITDIDDKIIKRAIENGETSDQLTTRMIAEMHADFDALNILRPDAEPRATHHIADI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E LI AY +NG DV +SV YG LS + L E K++
Sbjct: 122 IEMVETLITRRHAYVASNG----DVMFSVDTASGYGVLSRQDLDQLRAGARVEITEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P+ W+S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPGEPH---WSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF T+RD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAYYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMNDDF 361
HYRS +NYSE L A+ +L RLY+A++ P + + RF AM+DDF
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERLYIALRGTDPSVEAHG----GDEFEARFHDAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A S+LFD+A +N+ K+ ++A LR L LGLLE ++FL+N
Sbjct: 351 NTPEAYSVLFDMAREVNRLKAEDVQAANQLASTLRKLSGVLGLLEQDPEQFLQNG----- 405
Query: 416 KKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ I R +AR K++ AD+ R L GI+LED P G T WRR
Sbjct: 406 -AQVNDDEVKEIEALIQQRKDARATKDWALADQARDRLNEMGIVLEDGPQG-TIWRR 460
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N E+ LT R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENGETCDQLTGRMLAEMHADFDALLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++L+ AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLLERDHAYVASNG----DVMFSIDSDPQYGLLSRQDLEQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDPAAQPAG---GEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ KS MA +LR L N LGLL+ + FL++ +
Sbjct: 352 TPEAYSALFDLAREVNRLKSEDMAAANAMAAELRKLANVLGLLQQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K + AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKSKEWALADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|440757694|ref|ZP_20936876.1| Cysteinyl-tRNA synthetase [Pantoea agglomerans 299R]
gi|436428589|gb|ELP26244.1| Cysteinyl-tRNA synthetase [Pantoea agglomerans 299R]
Length = 461
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 304/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +I +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V + +YG LS + L E + K++
Sbjct: 122 IELVEKLIARGHAYVADNG----DVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---AWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSMPASGGDAFE---ARFRSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS +A +LR + N LG+L+ + FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDGASAHALASKLREMANVLGILQQDPELFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R++AR K + EAD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVEDGPQGSS-WRR 460
>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189082064|sp|B0U0I3.1|SYC_FRAP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 459
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 304/476 (63%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S KK+ F PI P K+ +YVCGIT YD CH+GHAR I FD++ R+ + +DVT+V
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFDVTFV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N E+ L R IK+ + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGETTDKLVERTIKSMHDAFDKLNILRPTKEPRATQTIPEMIAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE L+ G AYQ NG DV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLVEKGFAYQGTNG----DVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI +++++Y+PEVIR+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIEEYHPEVIRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L+ A+ S+ RL+ A++DI + D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA IN K++ K LR L + LG+L +E+ K +
Sbjct: 352 NTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFK------Q 405
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ SE I+ I R++A+K KN+ AD+IR +L N GIILED G T W++
Sbjct: 406 GDGIDVSE--IEKLIAERTQAKKDKNYARADEIRNDLQNQGIILEDSATGTT-WKK 458
>gi|304395563|ref|ZP_07377446.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
gi|304356857|gb|EFM21221.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
Length = 461
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 304/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +I +I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V + +YG LS + L E + K++
Sbjct: 122 IELVEKLIARGHAYVADNG----DVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---AWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVPASGGDAFE---ARFRSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS +A +LR + N LG+L+ + FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDGASAHALASKLREMANVLGILQQDPELFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R++AR K + EAD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVEDGPQGSS-WRR 460
>gi|296101636|ref|YP_003611782.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056095|gb|ADF60833.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 461
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + EKLI G AY +NG DV +SV YG LS + L + + K++
Sbjct: 122 IDITEKLIARGHAYVADNG----DVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RF+ MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEAA---GGEAFEARFVEVMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMAAANALAAHLRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R EAR+ K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALINARLEARQAKDWAAADAARNRLTEMGIILEDGPQGTT-WRR 460
>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868556|ref|YP_005700025.1| cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 461
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYRL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES + LT R + D L+I PD +P AT++I +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENKESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI AY +NG DV ++V +YG LS + L E + K++
Sbjct: 122 IALVEQLIARDHAYVASNG----DVMFAVDTDPDYGVLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ +E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARAALERLYTALRGTDAAAQPAA---DETFTARFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K MA+ Q+RGL + LGLLE + + FL++
Sbjct: 352 TPEAYSVLFDMAREINRLKGEDMAQASALAAQMRGLAHVLGLLEQTPEHFLQSGAAAGDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K + AD+ R L GI+LED P G T WRR
Sbjct: 412 EVAQ-----IEALIKQRNDARAAKAWALADEARDSLNAMGIVLEDGPQGTT-WRR 460
>gi|107101226|ref|ZP_01365144.1| hypothetical protein PaerPA_01002258 [Pseudomonas aeruginosa PACS2]
gi|416854173|ref|ZP_11910721.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 138244]
gi|334844312|gb|EGM22888.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 138244]
gi|453047156|gb|EME94871.1| cysteinyl-tRNA ligase [Pseudomonas aeruginosa PA21_ST175]
Length = 460
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 293/474 (61%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++F P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQILIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
T A S+LF+LA +N+ + +A +L+ L LG+L+ + FL+ +
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA----E 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R EAR KN+ E+D+IR L G++LED G T WR
Sbjct: 407 GKVDAAE--VEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGKGGTT-WR 457
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 301/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI LT R KA ED L++ PD +P T+++ +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+++LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IVMVKRLIEKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK Y+PE +R+F++
Sbjct: 235 HENEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDPESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++D+ + ++ NE AK F AMNDDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRDVEPVECD--LEGNEFVAK-FRKAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +N+ K + ++A LR +GN LG+ + + + FL+ +
Sbjct: 352 TPEALPVLFELAKELNRVKESDAVQAGQLAFILRSIGNVLGVAQQAPEAFLQGGQDDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR KN+ AD+ R L G+ILED GKT WR+
Sbjct: 412 AT-------IEALIVKRNEARASKNWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|226944443|ref|YP_002799516.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
gi|259511824|sp|C1DHE6.1|SYC_AZOVD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226719370|gb|ACO78541.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
Length = 461
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/471 (46%), Positives = 284/471 (60%), Gaps = 13/471 (2%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TL IY++ S+ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR + YD
Sbjct: 2 TLSIYSTLSKGKEAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVSRWLRHSGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N ES + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRANENGESFQDLVGRMIAAMHEDEARLNVLRPDSEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI LI AY NG DV Y V F YGKLS R I E K+
Sbjct: 122 MHAMIRTLIDKSYAYAPGNG----DVYYRVGKFEGYGKLSRRKIEDLKIGARIEPGEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K P E W S WGAGRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAK---PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A ++ N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKRYANIWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L A+ +L R Y A+K +P + + RF AMNDDF
Sbjct: 295 VSSHYRSPINYSEDSLREARAALERFYNALKGLPAAQPTG----GDEYVARFNAAMNDDF 350
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNY 421
NTP A ++LF+LA +N+ + + L L+ + +
Sbjct: 351 NTPEACAVLFELAREVNRLRDTDLQSAASLAARLKELGGLLGVLQLEPEAFLQAGAADRV 410
Query: 422 SENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+++ I R AR KN+ E+D+IR +L G++LED NG T WR +
Sbjct: 411 DAAEVEALIAARLAARAGKNWAESDRIRDQLAAMGVLLEDGKNGTT-WRLV 460
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/475 (45%), Positives = 303/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIFNTLTREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
++RNITD+DDKII A +NNE+ L R I +D L+I PD +P AT ++P+I
Sbjct: 62 RFIRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E LI G AY +GDV + V ++ NYG+LS + L E + KK+
Sbjct: 122 IAMVEALIKRGHAYV----AADGDVMFDVESYQNYGRLSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWESPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F L
Sbjct: 235 HENEIAQSCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDSESVRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS ++YSE + A+K+L RLY A++ ++ + ++ + + F AM+DDFN
Sbjct: 295 TAQYRSLLDYSEENIGLARKALERLYTALR---GCDFNVKMPESDQYVEAFKEAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LFDLA INK N++ +++ +L+ L LGLLE + FL+ + +
Sbjct: 352 TPGALAVLFDLAREINKLKTENINEANRLSSRLKQLAGVLGLLEQDPESFLQGDTADDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ +AD R EL GI+LED NG T WR+
Sbjct: 412 AK-------IEQLIKQRNEARAAKDWAQADAARNELTAMGIVLEDGANGTT-WRK 458
>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431884|sp|P57890.1|SYC_PASMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
Length = 459
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 303/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|421154515|ref|ZP_15614020.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|404521916|gb|EKA32470.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
Length = 460
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/477 (47%), Positives = 292/477 (61%), Gaps = 31/477 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ S+ K++ P+ +V +YVCG+T YDYCHLGH R M+ FD++ RWLR YD+
Sbjct: 2 LQIYNTLSKTKEVVTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +N E LT R I A ED L+I PD +P AT++I +
Sbjct: 62 TYVRNITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHIAGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
MI+ LI G AY NG DV Y V F YGKLS R + E K+D
Sbjct: 122 HAMIQTLIDKGYAYAPGNG----DVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGEAKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKGAKPGEP---SWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A + W+H G + IN +KMSKS GNF TIR++L+KY+PEV+R+ ++
Sbjct: 235 HENEIAQSEAATGKPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLEKYHPEVVRYLLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS INYSE L AK +L R Y A+K +P+ + + + +RF AM+DDFN
Sbjct: 295 ASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAE----YVERFAAAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKS---------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
T A S+LF+LA +N+ + KQL GL LG+L+ + FL+
Sbjct: 351 TAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGL---LGVLQLEPEAFLQAGA-- 405
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ V+ +E ++ I R EAR KN+ E+D+IR +L G++LED G T WR
Sbjct: 406 --EGKVDAAE--VEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 457
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 295/475 (62%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F PI PGKV +YVCG+T YD+CH+GH R + FD+V R+LR + Y +
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A + + LT R I D L + PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAAETGVTCDDLTERLIGDMHADFDALGMVRPDVEPRATQHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++++ L+ AY +NG DV + V ++ +YGKLSG+ L + + K++
Sbjct: 122 IELVQSLLDKEHAYVADNG----DVMFIVDSYADYGKLSGQDLEQLQAGARVDVVDAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L R+Y A++D+P+ + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARAALERMYTALRDLPEAAAAG----GDEQVARFKEAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDL IN+ K MA +LR LG LG+L+ D FLK +
Sbjct: 351 TPEAYSALFDLVREINRQKGEDMAVAAGLGARLRELGAVLGILQQDPDAFLKGD------ 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR KN+ AD R L GI+LED GKT WRR
Sbjct: 405 -EADDEVAEIERLITERNQARADKNWAAADAARARLTEMGIVLED-SAGKTSWRR 457
>gi|425063642|ref|ZP_18466767.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
gi|404382196|gb|EJZ78657.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
Length = 459
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 303/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGKGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARAAKDWASADATRNKLAEMGVVLEDNVNGTT-WRK 458
>gi|383309904|ref|YP_005362714.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871176|gb|AFF23543.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
Length = 459
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 302/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHRDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|422320434|ref|ZP_16401495.1| CysS protein [Achromobacter xylosoxidans C54]
gi|317404801|gb|EFV85180.1| CysS protein [Achromobacter xylosoxidans C54]
Length = 484
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 306/490 (62%), Gaps = 30/490 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L + PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEFYIAAMHADERALGVASPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I KL GLAYQ ++G DVNY+VR F YGKLSG+ + + E+ + K
Sbjct: 122 LDIIGKLEQKGLAYQADDG----DVNYAVRGFEGYGKLSGKTLDDL--RAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKEEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP------ 294
PHHENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR + + P
Sbjct: 236 PHHENEIAQTEGAFGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGEPAADTAD 295
Query: 295 --------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
E++RFFI+R+HYRS NY+ L A+ +L RLY A++++P + + ID N
Sbjct: 296 YRVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADD--QGIDWN 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ KS + A QL+ LG LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRGKSARSAGQLKALGGLLGLLQQDPAAY 413
Query: 407 LKNNIY-----TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+++ E+ I+ I R+ A+ ++F +AD+IR EL GI L+D
Sbjct: 414 FQSSTRYSAAGMEQGARAELDAAAIQALIDARAAAKAARDFAQADRIRAELREAGIELDD 473
Query: 462 MPNGKTEWRR 471
P G T+WRR
Sbjct: 474 KPGGLTQWRR 483
>gi|399114983|emb|CCG17779.1| cysteinyl-tRNA synthetase [Taylorella equigenitalis 14/56]
Length = 486
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 303/492 (61%), Gaps = 31/492 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IY+S +R+KQ PI K+ +YVCGIT YD+CHLGHAR+++ FD++ RWLR Y V
Sbjct: 1 MQIYDSLTRQKQELKPIETNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRYKGYQV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A N+ + +T +I A D L + PPD++P AT++I +
Sbjct: 61 NYVRNVTDIDDKIIKKAVALNKRLNEITQFYIDAMHADERALGVLPPDHEPRATDHISGM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNNF 179
L++I KL GLAY++ + DVN+SVR F +YGKLSGR I S I+E
Sbjct: 121 LEIINKLESKGLAYKSKDN----DVNFSVRKFDSYGKLSGRSIDDLRSGERVAISEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K+++P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLK
Sbjct: 174 KLDPLDFVLWKAAKDSEPEDSKWTSPYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDLK 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK--------- 290
FPHHENEIAQSEGAY + WMH G + ++N KMSKS GNF TIR +
Sbjct: 234 FPHHENEIAQSEGAYDIELARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGEVSDDSA 293
Query: 291 -----KYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINY-KKIID 344
+ E++RFFI+R+HYRS N++ L A+ ++ RLY ++ + ID
Sbjct: 294 EYEFNEREAEMLRFFIVRNHYRSAQNFTPDNLVDAQSAIDRLYQTFGTFDAKDFIESPID 353
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSD 404
+ P+A +F+ AM+DDFNT +A+S+LF+L +NK KS ++ K L LG LGL +
Sbjct: 354 WSNPYAVKFMNAMDDDFNTSLAVSVLFELNTEVNKTKSKELFKLLVALGKLLGLFRVNPR 413
Query: 405 EFLK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
+ K + + + S NDI+ I R A+ K+F +AD+IR L GI L
Sbjct: 414 LYFKIPTRYSKTQIDGSGGIAISNNDIEGLIEERKVAKANKDFKKADEIRDYLKATGIEL 473
Query: 460 EDMPNGKTEWRR 471
ED P G T WRR
Sbjct: 474 EDKPGGITNWRR 485
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES LT+R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTDANAQPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K MA +LR L LGLL+ ++FL++ +
Sbjct: 352 TPEAYSALFDLARDVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSGAQADDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQGTT-WRR 460
>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
Length = 460
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 301/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR + YD+
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I D L ++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI G AY +NG DV + V + +YG+LS + L + + K+
Sbjct: 122 IALCERLIERGFAYVASNG----DVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ ++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARSALERLYTSLR---GLDTSVEAAGGEEFVTRFKEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A ++R L + LGLL + FL+
Sbjct: 352 TPEAYSVLFDMAREINRLKTDDVATASALGARMRELADVLGLLSQEPEAFLQGGA----G 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ N +E I+ I R +AR K++ AD+ R +L+ GIILED G T WRR
Sbjct: 408 EDDNVAE--IEALIQQRLDARAAKDWAAADEARDKLLAMGIILEDGAQGTT-WRR 459
>gi|427824698|ref|ZP_18991760.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
gi|410589963|emb|CCN05039.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
Length = 467
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/486 (45%), Positives = 297/486 (61%), Gaps = 39/486 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +Q PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQRPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L GLAY+ +G DVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKGLAYRAEDG----DVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + +D +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADG--QGVDWS 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPPAY 413
Query: 407 LKNNI-YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNG 465
++ Y+ + + A+ ++F AD IR EL GI L+D P G
Sbjct: 414 FQSPTRYSAAARGQG-------------APAKAARDFARADAIRAELRAAGIELDDRPGG 460
Query: 466 KTEWRR 471
T+WRR
Sbjct: 461 LTQWRR 466
>gi|432396401|ref|ZP_19639192.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|432722093|ref|ZP_19957018.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|432726636|ref|ZP_19961518.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|432740322|ref|ZP_19975044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|432989634|ref|ZP_20178302.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|433109856|ref|ZP_20295732.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
gi|430918408|gb|ELC39415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE25]
gi|431268116|gb|ELF59597.1| cysteinyl-tRNA synthetase [Escherichia coli KTE17]
gi|431275345|gb|ELF66374.1| cysteinyl-tRNA synthetase [Escherichia coli KTE18]
gi|431286451|gb|ELF77277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE23]
gi|431498086|gb|ELH77300.1| cysteinyl-tRNA synthetase [Escherichia coli KTE217]
gi|431631059|gb|ELI99378.1| cysteinyl-tRNA synthetase [Escherichia coli KTE150]
Length = 461
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/479 (47%), Positives = 298/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AMN
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 TDDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 303/479 (63%), Gaps = 32/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI PGKV +YVCG+T YDYCH+GHAR + FD + R+LR DV
Sbjct: 2 LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNES + L +RF +A +D L++ PD +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIRRAAENNESCEALVARFTEAMYQDFDALNLLRPDIEPTVTGHMAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS----GRLISSNFNKINEKNNF 179
+ +I+ L+ G AY + G DV + V+ F +YGKLS +L S +++E
Sbjct: 122 IDIIQTLVNKGHAYVTDAG----DVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDES--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DFALWK +K P E W S WG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 175 KRNPMDFALWKSAK---PGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLM 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENE+AQS A+ +VNYW+HSG V++N +KMSKS NF TIR++LK+Y E +R+
Sbjct: 232 FPHHENEVAQSCCAHDTNYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVLKQYQAESVRY 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+L SHYRS +NYSE LN A +L RLY A++ + ++L+ H RF AMND
Sbjct: 292 FLLSSHYRSQLNYSEENLNQAHAALERLYTALRGVTPATE---LNLDNDHVARFQAAMND 348
Query: 360 DFNTPVAISILFDLA---NIINKNKSIKMAKQLRGL----GNWLGLLEYSSDEFLKNNIY 412
DFNT A+ +LFDLA NI ++ + A QL GL G +GLLE + + FL+
Sbjct: 349 DFNTAEALPVLFDLARELNITKEDGESEQAAQLAGLMRYLGGVMGLLEQAPEAFLQGGGD 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R EL GI+LED G T WRR
Sbjct: 409 DDEVAK-------IEGLIKARNDARASKDWAAADAARDELTAMGIVLEDGAGG-TSWRR 459
>gi|329298451|ref|ZP_08255787.1| cysteinyl-tRNA synthetase [Plautia stali symbiont]
Length = 461
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/476 (46%), Positives = 301/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ PI ++ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEELKPIHACEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I +D L I PPD +P AT +I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESIETLTNRMIAEMHKDFAALGILPPDLEPRATRHIGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++I KLI G AY +NG DV + V + +YG LS + L E K++
Sbjct: 122 IELIGKLIDRGHAYVADNG----DVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P WNS WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEPA---WNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEVAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +N E LN A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNDGEDNLNQARAALERLYTALR---HTDASATPAGGEAFEARFRTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS +A +LR L + LG+L+ ++FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDKAAADALAAKLRQLADVLGILQQDPEQFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R+ AR K++ +AD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNADEVAEIEHWVKTRANARAAKDWAQADIARDKLNELGVIVEDGPKGSS-WRR 460
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES LT+R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTDANAQPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K MA +LR L LGLL+ ++FL++ +
Sbjct: 352 TPEAYSALFDLAREVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGPQGTT-WRR 460
>gi|372277493|ref|ZP_09513529.1| cysteinyl-tRNA synthetase [Pantoea sp. SL1_M5]
gi|390435779|ref|ZP_10224317.1| cysteinyl-tRNA ligase [Pantoea agglomerans IG1]
Length = 461
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 303/476 (63%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +I +I
Sbjct: 62 NYVRNITDIDDKIIRRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E LI G AY +NG DV + V + +YG LS + L E + K++
Sbjct: 122 IELVETLIARGHAYVADNG----DVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---AWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY E LN A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALR---HTDSSVPAHGGEAFEARFRSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS +A +LR + N LG+L+ + FL++
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDGASAHGLASKLREMANVLGILQQDPELFLQSG------ 405
Query: 417 KNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R++AR K + EAD R +L G+I+ED P G + WRR
Sbjct: 406 AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVEDGPQGSS-WRR 460
>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
Length = 461
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYTL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAG---GEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMAAANAMASHLRKISGVLGLLEQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 ELA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|381405378|ref|ZP_09930062.1| cysteinyl-tRNA synthetase [Pantoea sp. Sc1]
gi|380738577|gb|EIB99640.1| cysteinyl-tRNA synthetase [Pantoea sp. Sc1]
Length = 461
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/480 (47%), Positives = 304/480 (63%), Gaps = 33/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +IP+I
Sbjct: 62 NYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDQEPRATRHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E LI G AY +NG DV + V + +YG LS + L E + K++
Sbjct: 122 IALVETLIARGHAYVADNG----DVMFDVLSDPDYGALSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK ++P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKADEP---AWSSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSGCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIK----DIPKINYKKIIDLNEPHAKRFIIAMN 358
HYRS +NY E LN A+ +L RLY A++ +P E RF AM+
Sbjct: 295 SGHYRSQLNYGEDNLNQARAALERLYTALRHTESSVPASG-------GEAFEARFRSAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ KS + +A +LR L LG+L+ + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKSEEGASAHGLASKLRELAKVLGILQQDPELFLQSG-- 405
Query: 413 TERKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R++AR K + EAD R +L G+I+ED P G + WRR
Sbjct: 406 ----AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVEDGPQGSS-WRR 460
>gi|378773899|ref|YP_005176142.1| cysteinyl-tRNA synthetase [Pasteurella multocida 36950]
gi|356596447|gb|AET15173.1| cysteinyl-tRNA synthase [Pasteurella multocida 36950]
Length = 459
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 304/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR Y++
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMISEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWSSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED NG T WR+
Sbjct: 406 -----SDNDEVVLIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNGTT-WRK 458
>gi|421263687|ref|ZP_15714715.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401689234|gb|EJS84709.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 459
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 302/479 (63%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+ L + I +D L++ PD +P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ MIEKLI AY + NGDV + V +F YGKLS + L E N KK+
Sbjct: 122 IAMIEKLIARQHAYVS----ANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVNVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGETSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF T+R++L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHSGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSLYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ + + + + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHSALERLYTALR---GTDPTAVATEGQNYLAAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSI----KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP AIS+LF++A IN KN+ I +A +LR L LGLL ++FL++
Sbjct: 352 TPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG------ 405
Query: 417 KNVNYSEND----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
S+ND I+ I R++AR K++ AD R +L G++LED N T WR+
Sbjct: 406 -----SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNATT-WRK 458
>gi|33596886|ref|NP_884529.1| cysteinyl-tRNA synthetase [Bordetella parapertussis 12822]
gi|33573587|emb|CAE37581.1| cysteinyl-tRNA synthetase [Bordetella parapertussis]
Length = 551
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/493 (45%), Positives = 304/493 (61%), Gaps = 31/493 (6%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+ L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR +
Sbjct: 66 AMLHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGL 125
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
V YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+
Sbjct: 126 AVDYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVG 185
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NN 178
++L +I +L GLAY+ +GDVNY+VR F +YGKLSG+ S + + E+ +
Sbjct: 186 EMLDIIGRLESKGLAYRAE----DGDVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGS 239
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DL
Sbjct: 240 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 299
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK------- 291
KFPHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 300 KFPHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDTQ 359
Query: 292 ----YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID 344
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + +D
Sbjct: 360 AEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADG--QGVD 417
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSD 404
+EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+
Sbjct: 418 WSEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPP 477
Query: 405 EFLKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ ++ Y+ + I+ +I R+ A+ ++F AD IR EL G+
Sbjct: 478 AYFQSPTRYSAAAREQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGVE 537
Query: 459 LEDMPNGKTEWRR 471
L+D P G T+WRR
Sbjct: 538 LDDKPGGLTQWRR 550
>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 460
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 293/475 (61%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNES LT+R + D L+IQ PD +P AT +I +I
Sbjct: 62 TYVRNVTDVDDKIIKRATENNESCDALTTRMLSEMHSDFDALNIQRPDSEPRATQHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +S+ +YG LS + L E + K++
Sbjct: 122 IQITEELINRGHAYVADNG----DVMFSIDTNPDYGLLSRQDLEQLQAGARVEIADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHGGPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLGYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ K +E RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALRGTDKSAQPT---GSEAFEARFTEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN K+ +A +LR L LGLLE ++FL+ +
Sbjct: 352 TPEAYSVLFDIAREINCLKTENLAAANGLAAELRKLAGILGLLEQEPEQFLQGGAH---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ I+ I R++AR K + AD R +L I LED P G T WRR
Sbjct: 408 --VDDDVAQIEALIKQRNDARTNKEWALADAARDQLNAMRIELEDGPQGTT-WRR 459
>gi|319779351|ref|YP_004130264.1| cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
gi|397661589|ref|YP_006502289.1| cysteinyl-tRNA synthetase [Taylorella equigenitalis ATCC 35865]
gi|317109375|gb|ADU92121.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
gi|394349768|gb|AFN35682.1| cysteinyl-tRNA synthetase [Taylorella equigenitalis ATCC 35865]
Length = 486
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/492 (45%), Positives = 302/492 (61%), Gaps = 31/492 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IY+S +R+KQ PI K+ +YVCGIT YD+CHLGHAR+++ FD++ RWLR Y V
Sbjct: 1 MQIYDSLTRQKQELKPIETNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRYKGYQV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A N+ + +T + A D L + PPD++P AT++I +
Sbjct: 61 NYVRNVTDIDDKIIKKAVALNKRLNEITQFYTDAMHADERALGVLPPDHEPRATDHISGM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNNF 179
L++I KL GLAY++ + DVN+SVR F +YGKLSGR I S I+E
Sbjct: 121 LEIINKLESKGLAYKSKDN----DVNFSVRKFDSYGKLSGRSIDDLRSGERVAISEA--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K DPLDF LWK +K+++P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLK
Sbjct: 174 KLDPLDFVLWKAAKDSEPEDSKWTSPYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDLK 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLK--------- 290
FPHHENEIAQSEGAY + WMH G + ++N KMSKS GNF TIR +
Sbjct: 234 FPHHENEIAQSEGAYDIELARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGEVSDDSA 293
Query: 291 -----KYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINY-KKIID 344
+ E++RFFI+R+HYRS N++ L A+ ++ RLY ++ + ID
Sbjct: 294 EYEFNEREAEMLRFFIVRNHYRSAQNFTPDNLVDAQSAIDRLYQTFGTFDAKDFIESPID 353
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSD 404
+ P+A +F+ AM+DDFNT +A+S+LF+L +NK KS ++ K L LG LGL +
Sbjct: 354 WSNPYAVKFMNAMDDDFNTSLAVSVLFELNTEVNKTKSKELFKLLVALGKLLGLFRVNPR 413
Query: 405 EFLK-----NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
+ K + + + S NDI+ I R A+ K+F +AD+IR L GI L
Sbjct: 414 LYFKIPTRYSKTQIDGSGGIAISNNDIEGLIEERKAAKANKDFKKADEIRDYLKATGIEL 473
Query: 460 EDMPNGKTEWRR 471
ED P G T WRR
Sbjct: 474 EDKPGGITNWRR 485
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES LT+R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTDANAQPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K MA +LR L LGLL+ ++FL++ +
Sbjct: 352 TPEAYSALFDLARDVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKAKDWALADAARDRLNEMNIVLEDGPQGTT-WRR 460
>gi|238920879|ref|YP_002934394.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
gi|259511831|sp|C5B8V6.1|SYC_EDWI9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|238870448|gb|ACR70159.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 461
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI G+V +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGYRL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES + LT R + D L+I PD +P AT++I +I
Sbjct: 62 KYVRNVTDVDDKIIKRALENQESCEQLTERMLAEMHRDFDALNIARPDVEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++E+LI AY +NG DV ++V +YG LS + L E + K++
Sbjct: 122 IALVEQLIARDHAYVASNG----DVMFAVDTDPDYGVLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V I+ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGAYVNCWMHSGMVMIDREKMSKSLGNFFTIRDVLAHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARAALERLYTALRGT-DVAAQPTAD--ETFTTRFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K MA+ Q+RGL + LGLLE + + FL++
Sbjct: 352 TPEAYSVLFDMAREINRLKGEDMAQANALAAQMRGLAHVLGLLEQTPEHFLQSGAAAGDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K + AD+ R L GI+LED P G T WRR
Sbjct: 412 EVAQ-----IEALIRQRNDARAAKAWALADEARDSLNAMGIVLEDGPQGTT-WRR 460
>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|187631629|sp|A9MLA7.1|SYC_SALAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 461
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IEITRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ KS MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKSEDMTAANAMASHLRKISGVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
gi|187631654|sp|A4VL73.2|SYC_PSEU5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 292/475 (61%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ S+ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR YD
Sbjct: 2 ALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 62 VTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E + K+
Sbjct: 122 MHTMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P+ + RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAG----GDEFVARFAAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L LG+L+ D FL+
Sbjct: 351 NSPEACAVLFEMIREVNRLREADLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGA---- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 407 AGKVDAAE--VEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|422835304|ref|ZP_16883360.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
gi|371612695|gb|EHO01202.1| cysteinyl-tRNA synthetase [Escherichia coli E101]
Length = 461
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD QP AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMQPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLHEMGIVLEDGPQGTT-WRR 460
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 297/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNES + LT+R + +D L+++ PD +P AT++IP+I
Sbjct: 62 TYVRNVTDVDDKIIKRALENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI AY +NG DV ++V + +YG LS + L E + K++
Sbjct: 122 IALTERLIARDHAYVASNG----DVMFAVDSDPDYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALR---GTDANATPAGGAEFEARFRAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFD+A +N+ K+ +A +LR L + LGLLE + FL++ T
Sbjct: 352 TPEAYSALFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSGAQTNDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R++AR K++ AD R +L GI+LED P G T WRR
Sbjct: 412 EVAK-----IEALIKQRNDARSSKDWALADSARDQLNELGIVLEDGPQG-TIWRR 460
>gi|418849052|ref|ZP_13403787.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822399|gb|EJA78211.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 461
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFALWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|383816533|ref|ZP_09971929.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294627|gb|EIC82965.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
Length = 462
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 292/475 (61%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV NITDIDDKII A +N E L+ R I D L I PD +P AT++IP+I
Sbjct: 62 NYVCNITDIDDKIIKRAAENGEGFNDLSDRMIAEMHADFDSLGILRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++++LI AY +NGDV +SV + NYG LS + L E + K++
Sbjct: 122 VEIVQQLIDRDHAYV----AVNGDVMFSVASDPNYGLLSRQDLDQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P WNS WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWNSPWGNGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMHSG V I+ +KMSKS NF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLKYYDAESVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ S+ RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKLARTSMERLYTALR---GTDANAQPAGGEEFEARFRSAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ KS +A +LR L LGLL ++FL++ +
Sbjct: 352 TPEAYSVLFDMARDINRLKSENPQAANGLAAELRRLAGILGLLAQDPEQFLQSGAQADDN 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V E IK R +AR K++ AD+ R L GI+LED +G T WRR
Sbjct: 412 DEVAEIETLIKQ----RKDARASKDWALADQARDRLNEMGIVLEDGASGTT-WRR 461
>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
Length = 461
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQLRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|421728113|ref|ZP_16167269.1| cysteinyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|410371073|gb|EKP25798.1| cysteinyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 461
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GHAR + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHARTFVAFDVVSRYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV NITDIDDKII A +N ES L R I +D L+IQ PD +P AT++I +I
Sbjct: 62 KYVSNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNIQRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ K+VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAEPS---GGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|416074249|ref|ZP_11584479.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337722|ref|ZP_21151657.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348006937|gb|EGY47302.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546405|gb|ELT56069.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 469
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 304/475 (64%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 72 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AY +NG DV + V +F +YGKLS + L E N KK+
Sbjct: 132 IDIVQKLIQRGHAYVADNG----DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 TMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 245 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 305 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S+LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 362 TPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+E+R K++ AD R L GIILED PNG T WR+
Sbjct: 422 AK-------IEALIKQRNESRATKDWAAADAARNALTEMGIILEDGPNGTT-WRK 468
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/481 (43%), Positives = 299/481 (62%), Gaps = 36/481 (7%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+L +YN+ R+K+ F PI PG + +YVCG+T YDYCH+GHAR+MIVFD++ RWL + +D
Sbjct: 2 SLMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGFD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V YVRN TD+DDKII A + +I LT+ I A D+ L P ++P AT ++
Sbjct: 62 VDYVRNFTDVDDKIIKRAAERGIAIDALTNEMIDAFHADADALGCLRPTHEPRATAHMDA 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFK 180
++ MI+ L+ +AY + +G DV Y+VR F +YG+LSG+ I + ++++ + K
Sbjct: 122 MISMIQALMEKDMAYVSESG----DVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQS-K 176
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK++K ++P W S WG GRPGWHIECSAMSC LG FDIHGGG DLKF
Sbjct: 177 RDPLDFVLWKMAKADEP---AWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKF 233
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQ+ A F YW+H+GFV IN +KMSKS GNF TIR++ ++Y+PEV+R F
Sbjct: 234 PHHENEIAQARAANGGGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTERYHPEVLRMF 293
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIK-----DIPKINYKKIIDLNEPHAKRFII 355
+L +HYRS +++S+ L+ AK L RLY K + + ++ PH F
Sbjct: 294 MLGTHYRSPLDFSDAALDVAKSGLDRLYKTAKRCQESGVTGAGGQALL----PH--HFTT 347
Query: 356 AMNDDFNTPVAISILFDLANIINKN-----KSIKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
AM+DDFNTP A+++LFD + +NK +A Q + LG+++ + + ++
Sbjct: 348 AMDDDFNTPEALAVLFDTSRALNKGLNEAQDVTALAGQFTAMSALLGIVQQDTAIWFQSG 407
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ I+ I R +ARK ++F AD IR EL GI+LED +G T W+
Sbjct: 408 ---------DVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDSASGTT-WK 457
Query: 471 R 471
+
Sbjct: 458 K 458
>gi|392309602|ref|ZP_10272136.1| cysteinyl-tRNA synthetase [Pseudoalteromonas citrea NCIMB 1889]
Length = 459
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K F P+ GKV +YVCGIT YD+CH+GHAR + FD++ R+ R YDV
Sbjct: 2 LQIYNTLTRQKTPFKPLVEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYFRHLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE I LT R KA ED L+I P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEDINALTVRMTKAMHEDFDALNILPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++MIE+LI G AY ++G DV + V F YG+LS + L E K D
Sbjct: 122 IEMIERLITKGHAYVASSG----DVLFDVSTFEQYGQLSQQNLEMLQAGARVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWTSPWGEGRPGWHIECSAMSSKHLGDFFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS GNF T+R++LKKY+ E +R+F++
Sbjct: 235 HENEIAQSCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKKYDRETVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
YRS +NYS+ L A+ SL R+Y A++ + + ++ + +RF AMNDDFN
Sbjct: 295 NGQYRSQLNYSQENLEQARASLERIYTALRGVEPV---EVTLAGNSYVERFETAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ ++F+LA +N K+K + A + L LG LG+ + + + FL+
Sbjct: 352 TPEALPVIFELAKEVNLLKDKDSEAAAKHAYILVMLGEVLGIAQQAPESFLQG------- 404
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ N I+ I R+EAR K++ AD R L G++LED GKT WR+
Sbjct: 405 EQDNDEVAKIEALIVARNEARASKDWAAADVARDALTALGVVLEDSA-GKTTWRK 458
>gi|410645940|ref|ZP_11356395.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410134539|dbj|GAC04794.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 464
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/479 (45%), Positives = 309/479 (64%), Gaps = 28/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ + LT R I +D +++ PD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI G AYQ +G DV + V ++ +YGKLS + L N + ++ K D
Sbjct: 122 IAIIERLIQRGHAYQAKSG----DVLFDVSSYSDYGKLSKQDLEQLNIGSRVDVDSGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK K P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTVK---PGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+LK+++ E +R+F++
Sbjct: 235 HENEVAQSCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL-NEPHAKRFIIAMNDDF 361
+HYRS ++YSE + A+ +L RLY A++D +N +D+ ++ + RF AM+DDF
Sbjct: 295 SAHYRSQLSYSEDNITQARSALERLYTALRD---VNANIQVDMQSDDYLARFDKAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRG---------LGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LFD+A +NK K+ + Q R LG LG+L+ S E+L+ +
Sbjct: 352 NTPEAMAVLFDVAKELNKAKAEDQSGQSRASDLAGILLNLGKVLGILQRSPSEYLQGD-- 409
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ +E I+ I R++AR K++ AD R L IILED P+G T WR+
Sbjct: 410 --QQDADEVAE--IEALIKARNDARAAKDWPAADAARDGLNALNIILEDGPSGTT-WRK 463
>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|222155312|ref|YP_002555451.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|366161381|ref|ZP_09461243.1| cysteinyl-tRNA synthetase [Escherichia sp. TW09308]
gi|386618953|ref|YP_006138533.1| cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|387615841|ref|YP_006118863.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|387828542|ref|YP_003348479.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|417661098|ref|ZP_12310679.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|432371305|ref|ZP_19614366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|432380152|ref|ZP_19623115.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|432385981|ref|ZP_19628879.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|432405395|ref|ZP_19648117.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|432420637|ref|ZP_19663193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|432498773|ref|ZP_19740551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|432512732|ref|ZP_19749974.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|432557544|ref|ZP_19794235.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|432610258|ref|ZP_19846430.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|432615307|ref|ZP_19851439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|432644949|ref|ZP_19880751.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|432654534|ref|ZP_19890252.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|432693314|ref|ZP_19928526.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|432697840|ref|ZP_19933012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|432709359|ref|ZP_19944426.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|432744461|ref|ZP_19979165.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|432893189|ref|ZP_20105246.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|432902919|ref|ZP_20112536.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|432917706|ref|ZP_20122189.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|432925011|ref|ZP_20127102.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|432942407|ref|ZP_20139728.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|432980032|ref|ZP_20168811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|432984216|ref|ZP_20172954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|433037519|ref|ZP_20225136.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|433095455|ref|ZP_20281668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|433100097|ref|ZP_20286207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|433104663|ref|ZP_20290685.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|433143087|ref|ZP_20328265.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|433187320|ref|ZP_20371448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
gi|226735059|sp|B1LKE5.1|SYC_ECOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|333969454|gb|AEG36259.1| Cysteinyl-tRNA synthetase [Escherichia coli NA114]
gi|430899908|gb|ELC21986.1| cysteinyl-tRNA synthetase [Escherichia coli KTE11]
gi|430909487|gb|ELC30853.1| cysteinyl-tRNA synthetase [Escherichia coli KTE16]
gi|430911860|gb|ELC33128.1| cysteinyl-tRNA synthetase [Escherichia coli KTE15]
gi|430932312|gb|ELC52735.1| cysteinyl-tRNA synthetase [Escherichia coli KTE28]
gi|430947109|gb|ELC66816.1| cysteinyl-tRNA synthetase [Escherichia coli KTE178]
gi|431031922|gb|ELD44646.1| cysteinyl-tRNA synthetase [Escherichia coli KTE216]
gi|431044685|gb|ELD54945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE224]
gi|431094220|gb|ELD99866.1| cysteinyl-tRNA synthetase [Escherichia coli KTE49]
gi|431151076|gb|ELE52111.1| cysteinyl-tRNA synthetase [Escherichia coli KTE72]
gi|431157494|gb|ELE58133.1| cysteinyl-tRNA synthetase [Escherichia coli KTE75]
gi|431184199|gb|ELE83964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE86]
gi|431195273|gb|ELE94471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE93]
gi|431236551|gb|ELF31756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE162]
gi|431247034|gb|ELF41277.1| cysteinyl-tRNA synthetase [Escherichia coli KTE169]
gi|431251528|gb|ELF45535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE6]
gi|431295558|gb|ELF85297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE43]
gi|431425080|gb|ELH07154.1| cysteinyl-tRNA synthetase [Escherichia coli KTE165]
gi|431436449|gb|ELH17964.1| cysteinyl-tRNA synthetase [Escherichia coli KTE194]
gi|431446580|gb|ELH27324.1| cysteinyl-tRNA synthetase [Escherichia coli KTE173]
gi|431448483|gb|ELH29198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE175]
gi|431453958|gb|ELH34337.1| cysteinyl-tRNA synthetase [Escherichia coli KTE183]
gi|431494027|gb|ELH73617.1| cysteinyl-tRNA synthetase [Escherichia coli KTE211]
gi|431505959|gb|ELH84563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE215]
gi|431555054|gb|ELI28912.1| cysteinyl-tRNA synthetase [Escherichia coli KTE113]
gi|431619511|gb|ELI88431.1| cysteinyl-tRNA synthetase [Escherichia coli KTE139]
gi|431622220|gb|ELI91001.1| cysteinyl-tRNA synthetase [Escherichia coli KTE145]
gi|431634346|gb|ELJ02593.1| cysteinyl-tRNA synthetase [Escherichia coli KTE148]
gi|431666454|gb|ELJ33088.1| cysteinyl-tRNA synthetase [Escherichia coli KTE168]
gi|431709673|gb|ELJ74126.1| cysteinyl-tRNA synthetase [Escherichia coli KTE88]
Length = 461
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AMN
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMN 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMA------KQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA LR L + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANGMASHLRKLSSVLGLLEQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
gi|383177100|ref|YP_005455105.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|414574725|ref|ZP_11431934.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|415852442|ref|ZP_11528807.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|418262555|ref|ZP_12883934.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|420357139|ref|ZP_14858155.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420362062|ref|ZP_14862988.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|109894944|sp|Q3Z4P5.1|SYC_SHISS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
gi|391288875|gb|EIQ47374.1| cysteinyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391289353|gb|EIQ47848.1| cysteinyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391296989|gb|EIQ55065.1| cysteinyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|397903092|gb|EJL19399.1| cysteinyl-tRNA synthetase [Shigella sonnei str. Moseley]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYAADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTEKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|415790436|ref|ZP_11495055.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|415820945|ref|ZP_11509959.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|417192750|ref|ZP_12014597.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|417218201|ref|ZP_12023803.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|417299406|ref|ZP_12086636.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|417590210|ref|ZP_12240929.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|419201626|ref|ZP_13744853.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|419207530|ref|ZP_13750658.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419214078|ref|ZP_13757109.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419219795|ref|ZP_13762752.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|419231040|ref|ZP_13773831.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|419236371|ref|ZP_13779122.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419241968|ref|ZP_13784617.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419247379|ref|ZP_13789994.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419253156|ref|ZP_13795706.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419259194|ref|ZP_13801652.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419264908|ref|ZP_13807295.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|419270854|ref|ZP_13813187.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|419282385|ref|ZP_13824605.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419878696|ref|ZP_14400158.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419879713|ref|ZP_14401143.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419890227|ref|ZP_14410523.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419902951|ref|ZP_14422099.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419908910|ref|ZP_14427556.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|420090600|ref|ZP_14602368.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420096953|ref|ZP_14608277.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420105206|ref|ZP_14615764.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|420111644|ref|ZP_14621469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115267|ref|ZP_14624843.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420122529|ref|ZP_14631483.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128639|ref|ZP_14637191.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|420134779|ref|ZP_14642880.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|424747032|ref|ZP_18175241.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755822|ref|ZP_18183676.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424771008|ref|ZP_18198173.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425377365|ref|ZP_18761761.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli OK1180]
gi|345345084|gb|EGW77437.1| cysteinyl-tRNA synthetase [Escherichia coli 2534-86]
gi|378056534|gb|EHW18774.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8B]
gi|378063186|gb|EHW25356.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378068487|gb|EHW30587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378072849|gb|EHW34906.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8E]
gi|378082034|gb|EHW43980.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9B]
gi|378090593|gb|EHW52430.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378094581|gb|EHW56375.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378102477|gb|EHW64154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378107992|gb|EHW69610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378116471|gb|EHW77995.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378119143|gb|EHW80638.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378121799|gb|EHW83250.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10D]
gi|378139228|gb|EHX00469.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10F]
gi|386189931|gb|EIH78679.1| cysteine--tRNA ligase [Escherichia coli 4.0522]
gi|386193084|gb|EIH87383.1| cysteine--tRNA ligase [Escherichia coli JB1-95]
gi|386257198|gb|EIJ12689.1| cysteine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|388334332|gb|EIL00929.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388355205|gb|EIL20063.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388370902|gb|EIL34398.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388372985|gb|EIL36343.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388374161|gb|EIL37362.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|394385165|gb|EJE62708.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10224]
gi|394385728|gb|EJE63248.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394387139|gb|EJE64606.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394398048|gb|EJE74261.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394399442|gb|EJE75469.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394407155|gb|EJE82022.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394420883|gb|EJE94383.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394421067|gb|EJE94561.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|408309823|gb|EKJ26938.1| cysteine--tRNA ligase [Escherichia coli EC1865]
gi|421941150|gb|EKT98570.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421947115|gb|EKU04204.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421950090|gb|EKU06987.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 298/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY+A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYIALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|365105048|ref|ZP_09334440.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|395231060|ref|ZP_10409357.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|424731036|ref|ZP_18159624.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|363643989|gb|EHL83293.1| cysteinyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|394715181|gb|EJF21015.1| cysteinyl-tRNA synthetase [Citrobacter sp. A1]
gi|422894446|gb|EKU34258.1| cysteinyl-trna synthetase [Citrobacter sp. L17]
gi|455641712|gb|EMF20883.1| cysteinyl-tRNA synthetase [Citrobacter freundii GTC 09479]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA LR L + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANGMAAHLRKLSSVLGLLEQDPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 289/475 (60%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN+TD+DDKII A +NNES LT+R + D L+I PD +P AT++I +I
Sbjct: 62 TYVRNVTDVDDKIIKRAIENNESCDDLTTRMLAEMHNDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY NGDV +S+ +YG LS + L E + K++
Sbjct: 122 IEITETLIERGHAYV----AANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKQGEP---SWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLGYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ SL RLY +++ K RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTSLERLYTSLRGTDKSAQPAG---GAGFEARFTEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K+ +A +LR L LGLLE + FL+
Sbjct: 352 TPEAYSVLFDMAREINRLKAEDIVAANGLAAELRKLAGILGLLEQEPEHFLQGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ I+ I R++ARK K + AD R +L GI LED P G T WRR
Sbjct: 406 AQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELEDGPQGTT-WRR 459
>gi|410641387|ref|ZP_11351907.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|410138920|dbj|GAC10094.1| cysteinyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 464
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/479 (45%), Positives = 307/479 (64%), Gaps = 28/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLIVRYLRHKGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ + LT R I +D +++ PD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI G AYQ +G DV + V ++ +YGKLS + L N + ++ K D
Sbjct: 122 IAIIERLIQRGHAYQAKSG----DVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK K P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTVK---PGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+LK+++ E +R+F++
Sbjct: 235 HENEVAQSCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
+HYRS ++YSE + A+ +L RLY A++D +N +D+ + RF AM+DDF
Sbjct: 295 SAHYRSQLSYSEDNITQARSALERLYTALRD---VNANIQVDMQSGDYLARFDKAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRG---------LGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LFD+A +NK K+ + Q R LG LG+L+ S E+L+ +
Sbjct: 352 NTPEAMAVLFDVAKELNKAKAEDQSGQSRASDLAGILLNLGKVLGILQRSPSEYLQGD-- 409
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ +E I+ I R++AR K++ AD R L IILED P+G T WR+
Sbjct: 410 --QQDADEVAE--IEALIKARNDARAAKDWPAADAARDGLNALNIILEDGPSGTT-WRK 463
>gi|422765059|ref|ZP_16818786.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ K+VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|419195628|ref|ZP_13739035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
gi|378052504|gb|EHW14809.1| cysteinyl-tRNA synthetase [Escherichia coli DEC8A]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 299/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV ++V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFNVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY+A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYIALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P ++ +YVCG+T YD CH GH R + FD++ R+LR + Y+V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N E+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +G DV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYVAEDG----DVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YS L+ A+ +L RLY A++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLDYSVENLDLARSALERLYTALR---GCDVSGAAEGGEHYVEAFKTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLLE + FL+ + ++
Sbjct: 352 TPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPESFLQGDTNSDEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 412 A-------EIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPNG-TIWRK 458
>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
gi|187631631|sp|A8GAY0.1|SYC_SERP5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/475 (46%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES LT+R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTTRMLAEMHADFDSLLIERPDIEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI G AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 VEITQRLIDRGHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ +N + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALRGT-DVNAQPAG--GEVFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K+ + A +LR L LGLL+ + FL+ +
Sbjct: 352 TPEAYSALFDLAREVNRLKAEDLTAANGLAAELRKLAKVLGLLQQEPELFLQGGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKAKDWALADAARDRLNEMNIVLEDGPQGTT-WRR 460
>gi|33600720|ref|NP_888280.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|412339090|ref|YP_006967845.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica 253]
gi|427813892|ref|ZP_18980956.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica 1289]
gi|61216294|sp|Q7W862.2|SYC_BORPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216296|sp|Q7WLL0.1|SYC_BORBR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33568320|emb|CAE32232.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|408768924|emb|CCJ53697.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica 253]
gi|410564892|emb|CCN22440.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica 1289]
Length = 485
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 303/491 (61%), Gaps = 31/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L GLAY+ +GDVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKGLAYRAE----DGDVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + +D +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADG--QGVDWS 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPPAY 413
Query: 407 LKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ Y+ + I+ +I R+ A+ ++F AD IR EL G+ L+
Sbjct: 414 FQSPTRYSAAAREQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGVELD 473
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 474 DKPGGLTQWRR 484
>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
Length = 461
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 298/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L +A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKHARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K + MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 300/475 (63%), Gaps = 26/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR + Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 IAMVEKLIHNGHAYV----AADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YS L+ A+ +L RLY A++ ++ + I E + + F AM+DDFN
Sbjct: 295 TAHYRSLLDYSIDNLDLARSALERLYTALRGC-DVSGEAI---GEHYVEAFKTAMDDDFN 350
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLLE D FLK + +
Sbjct: 351 TPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGDANDDET 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 411 A-------EIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPNG-TIWRK 457
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 292/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N ES LT+R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRATENGESCDQLTARMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ N E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTNANAQPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ K M A +LR L LGLL+ ++FL++ +
Sbjct: 352 TPEAYSALFDLARDVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++ARK K++ AD R L I+LED G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARKAKDWALADAARDRLNEMSIVLEDGSQGTT-WRR 460
>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 460
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/475 (46%), Positives = 299/475 (62%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PI PGK+ +YVCG+T YD CH+GH R + FD+V R+LR + YD+
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+ RNITDIDDKII A +N ES +LT R I D L ++ PD +P AT +I +I
Sbjct: 62 TFARNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALGMKRPDVEPRATQFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI G AY +NG DV + V + +YG+LS + L + + K+
Sbjct: 122 IALCERLIERGFAYVASNG----DVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDMAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+PE +R+F++
Sbjct: 235 HENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLNHYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ ++ E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTSLR---GLDTSIEAAGGEEFVARFKEAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S++FD+A IN+ K+ + ++R L + LGLL + FL+
Sbjct: 352 TPEAYSVMFDMAREINRLKTDDVTKASALGSRMRELADVLGLLSQEPEAFLQGGA----G 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ N +E I+ I R +AR K++ AD+ R +L+ GIILED G T WRR
Sbjct: 408 EDDNVAE--IEALIQQRLDARAAKDWAAADEARDKLLAMGIILEDGAQGTT-WRR 459
>gi|145629045|ref|ZP_01784844.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|144978548|gb|EDJ88271.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
Length = 414
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/412 (49%), Positives = 279/412 (67%), Gaps = 17/412 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+IF PI KV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R ++ +D L++ PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVQEMYKDFDALNVLRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++EKLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IEIVEKLIKRGHAYVADNG----DVMFDVESFKEYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+HSG + ++ +KMSKS GNF TIRD+L YN E +R+F+L
Sbjct: 235 HENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLNHYNAEAVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A+ +L RLY A++ + ++ E + F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAQGALERLYTALRGTDQ---SAVVFGGENFVETFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
TP A+S+LF++A INK K+ +A +LR LG LGLL+ ++FL+
Sbjct: 352 TPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQ 403
>gi|448240905|ref|YP_007404958.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
gi|445211269|gb|AGE16939.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 290/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N+E+ LT R + D L I PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTDADAAPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ KS MA +LR L LGLL+ ++FL+ +
Sbjct: 352 TPEAYSALFDLAREVNRLKSEDMAAANGMAAELRKLAKVLGLLQQEPEQFLQGGAQVDDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+EAR K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNEARAAKDWALADAARDRLNEMNIVLEDGPQGTT-WRR 460
>gi|451822878|ref|YP_007459152.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775678|gb|AGF46719.1| cysteinyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 482
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/486 (46%), Positives = 306/486 (62%), Gaps = 22/486 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ + K F P G V +YVCG+T YDYCHLGHAR+M+VFD++QRWL + V
Sbjct: 2 LHIYNTLTHTKDKFKPFHNGLVRMYVCGMTVYDYCHLGHARVMVVFDVIQRWLHNIGFRV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + + IK +TS +I A D L + P+ +P AT+Y+ +
Sbjct: 62 EYVRNITDIDDKIINRALEIGKPIKEVTSFYINAMHADERALWVVSPNKEPKATDYVSHM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKK 181
LK I L NGLAY++ ++GDVN+SVR+F +YGKLS R + + +I + K+
Sbjct: 122 LKFINLLEKNGLAYRS----VDGDVNFSVRSFPSYGKLSRRTLDDLRSGERITILKS-KR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K N+P + +W S +G GRPGWHIECSAMS LL DIHGGG DL FP
Sbjct: 177 DPLDFVLWKKAKENEPEDSKWESSYGLGRPGWHIECSAMSHALLDLPVDIHGGGPDLVFP 236
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYN-------- 293
HHENEIAQ+EGAY +F NYWMH G + +N+ KMSKS N+ TIR ++ +
Sbjct: 237 HHENEIAQTEGAYGERFANYWMHCGPLMVNDSKMSKSLKNYSTIRQIIGSGDLSKPEYEV 296
Query: 294 ----PEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
E++RFFI+RSHYRS NY L A+ SL +LY AI + + + L++
Sbjct: 297 NHREAEMLRFFIVRSHYRSKQNYIYENLVDAQSSLDKLYTAISNFDLSDMNGVNCLDDVD 356
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
F AMNDDFNTP AISILF+LA+ NKN I+ AK+ + L N LGLL + + KN
Sbjct: 357 IIAFSNAMNDDFNTPKAISILFELASRTNKNHCIESAKKTKYLSNILGLLYQNPSSYFKN 416
Query: 410 NIYTER---KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGK 466
+ R K++ S++DI+ + R A+ ++ ++D IR EL +G+ LED+ +
Sbjct: 417 STRYTRDVLDKSLYLSDHDIEELVKQRITAKTNCDYNKSDHIRSELKKSGVELEDLTDSS 476
Query: 467 TEWRRI 472
T WRR+
Sbjct: 477 TRWRRV 482
>gi|359434426|ref|ZP_09224691.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918934|dbj|GAA60940.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/473 (46%), Positives = 301/473 (63%), Gaps = 25/473 (5%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKII A +N ESI LTSR KA ED L++ PD +P T+++ +I+
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTSRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIV 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPL 184
M+++LI G AY +GDV + V F YG LS + L E K DPL
Sbjct: 124 MVKRLIEKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHE 236
Query: 245 NEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRS 304
NEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK Y+ E +R+F++
Sbjct: 237 NEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISG 296
Query: 305 HYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTP 364
HYRS +NYS+ L+ A+ SL R+Y A++D+ + ++ NE AK F AM+DDFNTP
Sbjct: 297 HYRSQLNYSQENLDQARSSLERIYTALRDVEPVECD--LEGNEFVAK-FRKAMDDDFNTP 353
Query: 365 VAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
A+ +LF+LA +N+ +++ K+A LR LG LG+ + + + FL+ +
Sbjct: 354 EALPVLFELAKELNRVKDTEADQAGKLAFILRSLGEVLGVAQQAPEAFLQGG---QDDDE 410
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+ I R+E+R KN+ AD+ R L G+ILED GKT WR+
Sbjct: 411 VAI----IEALIVKRNESRASKNWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|397167255|ref|ZP_10490698.1| cysteine--tRNA ligase [Enterobacter radicincitans DSM 16656]
gi|396091401|gb|EJI88968.1| cysteine--tRNA ligase [Enterobacter radicincitans DSM 16656]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+L+ G AY +NG DV +SV YG+LS + L E K++
Sbjct: 122 IEITERLLERGHAYVADNG----DVMFSVPTDPTYGQLSRQDLDQLQAGARVEVAEIKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + E RF+ AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR---GTDSTVPAEGGEAFEARFVEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A +R L LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAHAANALASHMRKLAGVLGLLEQEPDVFLQSGAQADDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEQLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 297/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V +YG+LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPA---GGEAFEARFIDAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIK----MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N KN+ + MA LR + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKNEDMAAANAMASHLRKISAVLGLLEQEPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVAQ-----IEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|453062355|gb|EMF03346.1| cysteinyl-tRNA ligase [Serratia marcescens VGH107]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 290/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +N+E+ LT R + D L I PD +P AT +I +I
Sbjct: 62 NYVRNVTDVDDKIIRRAAENHETCDQLTERMLAEMHADFDALLIDRPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ ++LI AY +NG DV +S+ + YG LS + L E ++ K++
Sbjct: 122 IEITQRLIDRDHAYVASNG----DVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALR---GTDADAAPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFDLA +N+ KS MA +LR L LGLL+ ++FL+ +
Sbjct: 352 TPEAYSALFDLAREVNRLKSEDMAAANGIAAELRKLAKVLGLLQQEPEQFLQGGAQVDDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+EAR K++ AD R L I+LED P G T WRR
Sbjct: 412 EVA-----EIEALIKQRNEARAAKDWALADAARDRLNEMNIVLEDGPQGTT-WRR 460
>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|422806499|ref|ZP_16854931.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|432390459|ref|ZP_19633323.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
gi|226735060|sp|B7LJI4.1|SYC_ESCF3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
gi|430922816|gb|ELC43563.1| cysteinyl-tRNA synthetase [Escherichia coli KTE21]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMVAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|422785137|ref|ZP_16837876.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
gi|323963293|gb|EGB58857.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 298/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N+ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENSESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|415836402|ref|ZP_11518787.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
gi|417284620|ref|ZP_12071915.1| cysteine--tRNA ligase [Escherichia coli 3003]
gi|425276403|ref|ZP_18667746.1| cysteine--tRNA ligase [Escherichia coli ARS4.2123]
gi|323191193|gb|EFZ76457.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
gi|386242829|gb|EII84564.1| cysteine--tRNA ligase [Escherichia coli 3003]
gi|408207124|gb|EKI31885.1| cysteine--tRNA ligase [Escherichia coli ARS4.2123]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKGGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|419955025|ref|ZP_14471158.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri TS44]
gi|387968208|gb|EIK52500.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri TS44]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 289/475 (60%), Gaps = 25/475 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IY++ S+ K P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR Y+
Sbjct: 2 ALSIYSTLSKSKDELKPLEDNKVRMYVCGMTVYDFCHIGHARVMVAFDVVARWLRHRGYE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII AK+N ES + L +R I A ED L++ PD +P AT++I
Sbjct: 62 LTYVRNITDIDDKIIKRAKENGESFQELVARMIAAMHEDEARLNVLRPDLEPRATDHIAG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F YGKLS R I E + K+
Sbjct: 122 MHVMIQTLIDKGFAYAPGNG----DVYYRVGKFEGYGKLSRRKIEDLKIGARIEVDEAKE 177
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK +K +P W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 178 DPLDFVLWKGAKPGEP---SWESPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ +
Sbjct: 235 HHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLL 294
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L AK +L R Y +K +P E +RF AM+DDF
Sbjct: 295 VSSHYRSPINYSEDSLREAKGALERFYNGLKGLPVAAPAG----GEAFVERFGAAMDDDF 350
Query: 362 NTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
N+P A ++LF++ +N+ + +A +L+ L LG+L+ + D FL+ +
Sbjct: 351 NSPEACAVLFEMIREVNRLRETDLAGAAALAARLKELAGVLGVLQLAPDAFLQAGAAGKV 410
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ +L +AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 411 DAAAVEALIAARL------QARSEKNWAESDRIRDQLTAMGVVLEDGKGGTT-WR 458
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEVAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|421843582|ref|ZP_16276742.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411775303|gb|EKS58749.1| cysteinyl-tRNA synthetase [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHSDFDALNILRPDLEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+L+ G AY +NG DV + V NYG+LS + L + + K++
Sbjct: 122 IEITEQLMAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA LR L + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANGMAAHLRKLSSVLGLLEQDPEAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/475 (46%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR + Y++
Sbjct: 12 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 71
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 72 RYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 131
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 132 IAMVEKLIHNGHAYV----AADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSIKKN 187
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 188 PMDFVLWKMSKAGEP---SWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 244
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R+F L
Sbjct: 245 HENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFL 304
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YS L+ A+ +L RLY A++ ++ + I E + + F AM+DDFN
Sbjct: 305 TAHYRSLLDYSIDNLDLARSALERLYTALRGC-DVSGEAIG--GEHYVEAFKTAMDDDFN 361
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLLE D FLK + +
Sbjct: 362 TPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGDANDDET 421
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 422 A-------EIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPNG-TIWRK 468
>gi|424815404|ref|ZP_18240555.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNQMGIVLEDGPQGTT-WRR 460
>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|375117973|ref|ZP_09763140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378960494|ref|YP_005217980.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|386590471|ref|YP_006086871.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416424774|ref|ZP_11691955.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416432900|ref|ZP_11696505.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416440170|ref|ZP_11700751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416444471|ref|ZP_11703704.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416453677|ref|ZP_11709751.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416458657|ref|ZP_11713176.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416465692|ref|ZP_11717014.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416478343|ref|ZP_11721707.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416490174|ref|ZP_11726680.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416501486|ref|ZP_11732076.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416542410|ref|ZP_11751580.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416576758|ref|ZP_11769340.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416583650|ref|ZP_11773406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594999|ref|ZP_11780813.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596677|ref|ZP_11781569.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416605824|ref|ZP_11787256.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614650|ref|ZP_11792902.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416623468|ref|ZP_11797443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416633974|ref|ZP_11802255.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416638936|ref|ZP_11804235.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648571|ref|ZP_11809216.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416670853|ref|ZP_11820342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416681864|ref|ZP_11823863.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416693733|ref|ZP_11826833.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416706889|ref|ZP_11832078.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416713303|ref|ZP_11836945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416719366|ref|ZP_11841222.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723502|ref|ZP_11844168.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416733637|ref|ZP_11850598.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416739762|ref|ZP_11853992.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416745200|ref|ZP_11857132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416757240|ref|ZP_11863070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764316|ref|ZP_11867920.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416766726|ref|ZP_11869342.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418485343|ref|ZP_13054327.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491010|ref|ZP_13057539.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493088|ref|ZP_13059556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498170|ref|ZP_13064585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418504464|ref|ZP_13070822.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507905|ref|ZP_13074213.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418525684|ref|ZP_13091664.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763106|ref|ZP_13319230.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418766639|ref|ZP_13322711.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418771811|ref|ZP_13327817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418774939|ref|ZP_13330900.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781109|ref|ZP_13336994.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784571|ref|ZP_13340408.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418788084|ref|ZP_13343882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418793959|ref|ZP_13349685.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799466|ref|ZP_13355132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418804829|ref|ZP_13360433.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807689|ref|ZP_13363247.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812228|ref|ZP_13367752.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815587|ref|ZP_13371088.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821233|ref|ZP_13376658.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418828661|ref|ZP_13383682.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418831865|ref|ZP_13386815.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835867|ref|ZP_13390758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418838852|ref|ZP_13393694.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418844306|ref|ZP_13399098.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418854017|ref|ZP_13408701.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418860895|ref|ZP_13415470.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418864745|ref|ZP_13419269.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418866398|ref|ZP_13420861.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419727697|ref|ZP_14254665.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734001|ref|ZP_14260896.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739729|ref|ZP_14266473.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419745923|ref|ZP_14272533.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419749653|ref|ZP_14276132.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788833|ref|ZP_14314516.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419793876|ref|ZP_14319492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421570132|ref|ZP_16015825.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421577364|ref|ZP_16022952.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421581953|ref|ZP_16027494.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584647|ref|ZP_16030155.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|445144283|ref|ZP_21387032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445150875|ref|ZP_21389941.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|21264006|sp|Q8Z8P6.1|SYC_SALTI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216133|sp|Q5PCE2.1|SYC_SALPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631630|sp|A9MW31.1|SYC_SALPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710850|sp|B5FLP7.1|SYC_SALDC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558785|sp|B4TA89.1|SYC_SALHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558786|sp|B4SXP2.1|SYC_SALNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558787|sp|B5BCZ8.1|SYC_SALPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558788|sp|B4TN59.1|SYC_SALSV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|366056321|gb|EHN20647.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063705|gb|EHN27918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366065263|gb|EHN29453.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366071306|gb|EHN35406.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366073947|gb|EHN38011.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366080211|gb|EHN44183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366829565|gb|EHN56441.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372206453|gb|EHP19957.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|374354366|gb|AEZ46127.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|381297904|gb|EIC38988.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381299188|gb|EIC40262.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381301279|gb|EIC42335.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381304571|gb|EIC45546.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381310809|gb|EIC51635.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383797515|gb|AFH44597.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392615966|gb|EIW98401.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392616299|gb|EIW98732.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392733386|gb|EIZ90588.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392734350|gb|EIZ91532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392736650|gb|EIZ93812.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392747836|gb|EJA04827.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392750139|gb|EJA07115.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392754102|gb|EJA11021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392763639|gb|EJA20446.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392763784|gb|EJA20590.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392764542|gb|EJA21341.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392769858|gb|EJA26587.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392776968|gb|EJA33654.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778952|gb|EJA35623.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392789424|gb|EJA45943.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392790828|gb|EJA47321.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392792039|gb|EJA48507.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392798762|gb|EJA55033.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392803142|gb|EJA59343.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392814678|gb|EJA70629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392815126|gb|EJA71070.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392825524|gb|EJA81264.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826279|gb|EJA82012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392829863|gb|EJA85523.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840308|gb|EJA95844.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|402515390|gb|EJW22804.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402515952|gb|EJW23365.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525289|gb|EJW32579.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531165|gb|EJW38378.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|444847423|gb|ELX72573.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444856380|gb|ELX81413.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|254781678|sp|B7UKK3.1|SYC_ECO27 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
gi|187629823|sp|A0Q4Q1.1|SYC_FRATN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/476 (47%), Positives = 298/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG----- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ SE I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 407 -DGVDASE--IEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 458
>gi|419389943|ref|ZP_13930782.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|419395117|ref|ZP_13935901.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419400465|ref|ZP_13941199.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|419405639|ref|ZP_13946342.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419411130|ref|ZP_13951803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
gi|422330798|ref|ZP_16411815.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373248291|gb|EHP67722.1| cysteinyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|378244745|gb|EHY04687.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378251328|gb|EHY11228.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378252296|gb|EHY12190.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378257368|gb|EHY17207.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378261321|gb|EHY21116.1| cysteinyl-tRNA synthetase [Escherichia coli DEC15E]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMTAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|419916744|ref|ZP_14435033.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|388395398|gb|EIL56603.1| cysteinyl-tRNA synthetase [Escherichia coli KD2]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMITEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|432970700|ref|ZP_20159578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|433081471|ref|ZP_20267945.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|431485837|gb|ELH65494.1| cysteinyl-tRNA synthetase [Escherichia coli KTE207]
gi|431605306|gb|ELI74695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE133]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V YG LS + L + + K+
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRT 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|251784032|ref|YP_002998336.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254287398|ref|YP_003053146.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|378714071|ref|YP_005278964.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386598243|ref|YP_006099749.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|386605520|ref|YP_006111820.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|386607882|ref|YP_006123368.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|386612720|ref|YP_006132386.1| cysteinyl-tRNA synthetase [Escherichia coli UMNK88]
gi|386622899|ref|YP_006142627.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|386628111|ref|YP_006147831.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386633031|ref|YP_006152750.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386637937|ref|YP_006104735.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|386702670|ref|YP_006166507.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386708326|ref|YP_006172047.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|387606036|ref|YP_006094892.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|387611052|ref|YP_006114168.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|404373854|ref|ZP_10979084.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|407467973|ref|YP_006785585.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483296|ref|YP_006780445.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483848|ref|YP_006771394.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415800124|ref|ZP_11499194.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|415814734|ref|ZP_11506332.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|415828206|ref|ZP_11514822.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|415862805|ref|ZP_11536245.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|415877070|ref|ZP_11543353.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|416283944|ref|ZP_11647051.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|416341862|ref|ZP_11676298.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|416895976|ref|ZP_11925860.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|417118733|ref|ZP_11969251.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|417121043|ref|ZP_11970497.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|417132399|ref|ZP_11977184.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|417139602|ref|ZP_11983024.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|417144232|ref|ZP_11986038.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|417152979|ref|ZP_11991770.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|417163431|ref|ZP_11998667.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|417174830|ref|ZP_12004626.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|417179210|ref|ZP_12007310.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|417225306|ref|ZP_12028597.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|417229854|ref|ZP_12031440.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|417246914|ref|ZP_12040015.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|417267689|ref|ZP_12055050.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|417288269|ref|ZP_12075554.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|417307037|ref|ZP_12093915.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|417579750|ref|ZP_12230571.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|417595456|ref|ZP_12246124.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417600814|ref|ZP_12251399.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417606574|ref|ZP_12257102.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|417621796|ref|ZP_12272125.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|417637834|ref|ZP_12288007.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|417665611|ref|ZP_12315178.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|417700365|ref|ZP_12349505.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|417706059|ref|ZP_12355124.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|417711094|ref|ZP_12360100.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|417716053|ref|ZP_12364986.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|417737339|ref|ZP_12385945.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|417754323|ref|ZP_12402418.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|417803882|ref|ZP_12450917.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417826525|ref|ZP_12473103.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|417831633|ref|ZP_12478155.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417863774|ref|ZP_12508821.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|418042639|ref|ZP_12680830.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|418253733|ref|ZP_12878730.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|418944980|ref|ZP_13497936.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419168518|ref|ZP_13712916.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419179511|ref|ZP_13723136.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419185072|ref|ZP_13728594.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|419190319|ref|ZP_13733787.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419276658|ref|ZP_13818926.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419287990|ref|ZP_13830107.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419293328|ref|ZP_13835389.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419298769|ref|ZP_13840786.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419305052|ref|ZP_13846966.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419310117|ref|ZP_13851993.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419315395|ref|ZP_13857223.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419321194|ref|ZP_13862934.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419327418|ref|ZP_13869051.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419332855|ref|ZP_13874417.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419338277|ref|ZP_13879766.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|419344172|ref|ZP_13885556.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419348605|ref|ZP_13889958.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419353519|ref|ZP_13894803.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|419358851|ref|ZP_13900082.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419363853|ref|ZP_13905035.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419368812|ref|ZP_13909941.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|419373998|ref|ZP_13915054.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|419379419|ref|ZP_13920399.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|419384682|ref|ZP_13925584.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419699440|ref|ZP_14227056.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419804372|ref|ZP_14329531.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|419865801|ref|ZP_14388178.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419871660|ref|ZP_14393712.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419915388|ref|ZP_14433754.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|419924320|ref|ZP_14442211.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|419928907|ref|ZP_14446607.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|419945465|ref|ZP_14461907.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|419948837|ref|ZP_14465102.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420319117|ref|ZP_14820973.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|420329715|ref|ZP_14831420.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|420384166|ref|ZP_14883554.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|420389867|ref|ZP_14889139.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|421777864|ref|ZP_16214453.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|422352435|ref|ZP_16433217.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|422356189|ref|ZP_16436878.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|422362939|ref|ZP_16443487.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422369164|ref|ZP_16449567.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422378165|ref|ZP_16458388.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|422382389|ref|ZP_16462549.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|422748407|ref|ZP_16802320.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|422753183|ref|ZP_16807010.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|422763319|ref|ZP_16817074.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|422777227|ref|ZP_16830880.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|422782673|ref|ZP_16835458.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|422802421|ref|ZP_16850915.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|422827700|ref|ZP_16875873.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|422839049|ref|ZP_16887021.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|422960410|ref|ZP_16971858.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|422978523|ref|ZP_16977717.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|422991239|ref|ZP_16982010.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422993178|ref|ZP_16983942.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|422998389|ref|ZP_16989145.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423006853|ref|ZP_16997596.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423008494|ref|ZP_16999232.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423022680|ref|ZP_17013383.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423027834|ref|ZP_17018527.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423033671|ref|ZP_17024355.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423036537|ref|ZP_17027211.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423041657|ref|ZP_17032324.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423048343|ref|ZP_17039000.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423051927|ref|ZP_17040735.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423058892|ref|ZP_17047688.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423710290|ref|ZP_17684640.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|424837002|ref|ZP_18261639.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|425287081|ref|ZP_18678015.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|425298721|ref|ZP_18688771.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|425304029|ref|ZP_18693817.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|425421148|ref|ZP_18802373.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|427803585|ref|ZP_18970652.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|427808202|ref|ZP_18975267.1| cysteine tRNA synthetase [Escherichia coli]
gi|429722721|ref|ZP_19257618.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774816|ref|ZP_19306819.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429780079|ref|ZP_19312032.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784131|ref|ZP_19316044.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429789469|ref|ZP_19321344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429795699|ref|ZP_19327525.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429801625|ref|ZP_19333403.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429805257|ref|ZP_19337004.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429810068|ref|ZP_19341770.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429815828|ref|ZP_19347487.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429821416|ref|ZP_19353029.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429907091|ref|ZP_19373060.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911288|ref|ZP_19377244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429917124|ref|ZP_19383064.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922162|ref|ZP_19388083.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927980|ref|ZP_19393886.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931912|ref|ZP_19397807.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429933514|ref|ZP_19399404.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939168|ref|ZP_19405042.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946811|ref|ZP_19412666.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429949443|ref|ZP_19415291.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957727|ref|ZP_19423556.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432356871|ref|ZP_19600118.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|432361277|ref|ZP_19604474.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|432368498|ref|ZP_19611603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|432375601|ref|ZP_19618615.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|432410589|ref|ZP_19653272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|432430637|ref|ZP_19673082.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|432435165|ref|ZP_19677566.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|432439835|ref|ZP_19682198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|432444959|ref|ZP_19687268.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|432453139|ref|ZP_19695381.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|432455449|ref|ZP_19697651.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|432464537|ref|ZP_19706645.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|432469956|ref|ZP_19712009.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|432479879|ref|ZP_19721844.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|432484246|ref|ZP_19726170.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|432492823|ref|ZP_19734661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|432494389|ref|ZP_19736207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|432503229|ref|ZP_19744966.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|432522673|ref|ZP_19759812.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|432529894|ref|ZP_19766937.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|432532707|ref|ZP_19769707.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|432541902|ref|ZP_19778763.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|432547246|ref|ZP_19784043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|432552535|ref|ZP_19789266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|432567359|ref|ZP_19803886.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|432572521|ref|ZP_19809012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|432579200|ref|ZP_19815634.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|432582635|ref|ZP_19819045.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|432586825|ref|ZP_19823197.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|432591639|ref|ZP_19827968.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|432596411|ref|ZP_19832700.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|432601044|ref|ZP_19837298.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|432606405|ref|ZP_19842601.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|432620629|ref|ZP_19856675.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|432650049|ref|ZP_19885811.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|432669451|ref|ZP_19905000.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|432678122|ref|ZP_19913546.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|432678954|ref|ZP_19914357.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|432712244|ref|ZP_19947296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|432717537|ref|ZP_19952539.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|432731249|ref|ZP_19966087.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|432748981|ref|ZP_19983604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|432753323|ref|ZP_19987891.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|432758327|ref|ZP_19992831.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|432763814|ref|ZP_19998266.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|432769338|ref|ZP_20003702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|432773705|ref|ZP_20007995.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|432777378|ref|ZP_20011632.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|432782428|ref|ZP_20016614.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|432786174|ref|ZP_20020342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|432800808|ref|ZP_20034796.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|432804605|ref|ZP_20038551.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|432812631|ref|ZP_20046480.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|432814022|ref|ZP_20047833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|432819845|ref|ZP_20053559.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|432825974|ref|ZP_20059631.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|432830510|ref|ZP_20064119.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|432833574|ref|ZP_20067122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|432838074|ref|ZP_20071567.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|432842808|ref|ZP_20076229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|432848666|ref|ZP_20080179.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|432859288|ref|ZP_20085359.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|432873191|ref|ZP_20092889.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|432880015|ref|ZP_20096835.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|432897398|ref|ZP_20108307.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|432932861|ref|ZP_20132715.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|432959943|ref|ZP_20150198.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|432966635|ref|ZP_20155554.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|432977242|ref|ZP_20166067.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|432994316|ref|ZP_20182933.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|432998735|ref|ZP_20187275.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|433004052|ref|ZP_20192490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|433011261|ref|ZP_20199666.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|433012696|ref|ZP_20201079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|433022269|ref|ZP_20210295.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|433027568|ref|ZP_20215443.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|433031977|ref|ZP_20219787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|433056859|ref|ZP_20243946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|433061748|ref|ZP_20248711.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|433071574|ref|ZP_20258276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|433076721|ref|ZP_20263287.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|433086124|ref|ZP_20272528.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|433090850|ref|ZP_20277156.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|433114472|ref|ZP_20300288.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|433119073|ref|ZP_20304787.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|433124089|ref|ZP_20309680.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|433128846|ref|ZP_20314326.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|433133666|ref|ZP_20319049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|433138150|ref|ZP_20323437.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|433147978|ref|ZP_20333044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|433152670|ref|ZP_20337640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|433162341|ref|ZP_20347106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|433167315|ref|ZP_20351991.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|433172388|ref|ZP_20356948.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|433182058|ref|ZP_20366361.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|433192455|ref|ZP_20376476.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|433197152|ref|ZP_20381078.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|433201948|ref|ZP_20385759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|433206671|ref|ZP_20390372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|433211450|ref|ZP_20395065.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|433326928|ref|ZP_20403589.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|442597621|ref|ZP_21015406.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443616547|ref|YP_007380403.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|450185938|ref|ZP_21889301.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
gi|450211309|ref|ZP_21894283.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|29336539|sp|Q8FK44.1|SYC_ECOL6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123266145|sp|Q1RF08.1|SYC_ECOUT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629813|sp|A7ZIT5.1|SYC_ECO24 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629814|sp|A7ZXI1.1|SYC_ECOHS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629815|sp|A1A8J2.1|SYC_ECOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631652|sp|Q0T776.2|SYC_SHIF8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189082063|sp|B1IZ75.1|SYC_ECOLC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710841|sp|B6I0H1.1|SYC_ECOSE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735055|sp|B7ME49.1|SYC_ECO45 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735056|sp|B7NL20.1|SYC_ECO7I RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735057|sp|B7M4M9.1|SYC_ECO8A RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781679|sp|B7L7F3.1|SYC_ECO55 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781680|sp|B7MRI9.1|SYC_ECO81 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
UTI89]
gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli OK1357]
gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
gi|335577090|gb|EGM63323.1| cysteinyl-tRNA synthetase [Shigella flexneri J1713]
gi|338771329|gb|EGP26071.1| Cysteinyl-tRNA synthetase [Escherichia coli PCN033]
gi|340735785|gb|EGR64841.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340741591|gb|EGR75737.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341917063|gb|EGT66679.1| hypothetical protein C22711_0707 [Escherichia coli O104:H4 str.
C227-11]
gi|342928251|gb|EGU96973.1| cysteine--tRNA ligase [Escherichia coli MS 79-10]
gi|345343749|gb|EGW76129.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345354159|gb|EGW86386.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345361066|gb|EGW93228.1| cysteinyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345365010|gb|EGW97123.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345386371|gb|EGX16206.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345395395|gb|EGX25141.1| cysteinyl-tRNA synthetase [Escherichia coli TX1999]
gi|349736637|gb|AEQ11343.1| cysteinyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|354858352|gb|EHF18803.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354860225|gb|EHF20672.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354866921|gb|EHF27344.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354877257|gb|EHF37617.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354879564|gb|EHF39902.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354883648|gb|EHF43964.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354885952|gb|EHF46244.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354889019|gb|EHF49273.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354901620|gb|EHF61747.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354905851|gb|EHF65934.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354908358|gb|EHF68414.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354918830|gb|EHF78786.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354922518|gb|EHF82433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|355419010|gb|AER83207.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355423930|gb|AER88126.1| cysteinyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|371592474|gb|EHN81375.1| cysteinyl-tRNA synthetase [Escherichia coli TA124]
gi|371593900|gb|EHN82774.1| cysteinyl-tRNA synthetase [Escherichia coli H494]
gi|371603560|gb|EHN92213.1| cysteinyl-tRNA synthetase [Escherichia coli B093]
gi|371611520|gb|EHO00043.1| cysteinyl-tRNA synthetase [Escherichia coli H397]
gi|375319713|gb|EHS65802.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|377879269|gb|EHU43842.1| cysteinyl-tRNA synthetase [Escherichia coli DEC2B]
gi|378018924|gb|EHV81770.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378027972|gb|EHV90597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378032490|gb|EHV95071.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7D]
gi|378042422|gb|EHW04871.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378133979|gb|EHW95310.1| cysteinyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378136188|gb|EHW97485.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378147439|gb|EHX08587.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378153181|gb|EHX14267.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378156541|gb|EHX17588.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378161309|gb|EHX22292.1| cysteinyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378174552|gb|EHX35376.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378175188|gb|EHX36007.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378177188|gb|EHX37989.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378190671|gb|EHX51255.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378190795|gb|EHX51374.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378193682|gb|EHX54211.1| cysteinyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378204267|gb|EHX64683.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378208416|gb|EHX68800.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378208669|gb|EHX69049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13C]
gi|378219873|gb|EHX80140.1| cysteinyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378222018|gb|EHX82260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14A]
gi|378226412|gb|EHX86599.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14B]
gi|378234094|gb|EHX94176.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14C]
gi|378236993|gb|EHX97026.1| cysteinyl-tRNA synthetase [Escherichia coli DEC14D]
gi|380349455|gb|EIA37727.1| cysteinyl-tRNA synthetase [Escherichia coli SCI-07]
gi|383394197|gb|AFH19155.1| cysteinyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383404018|gb|AFH10261.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|383466054|gb|EID61075.1| cysteinyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|383474475|gb|EID66463.1| cysteinyl-tRNA synthetase [Escherichia coli W26]
gi|384472678|gb|EIE56730.1| cysteinyl-tRNA synthetase [Escherichia coli AI27]
gi|385704938|gb|EIG42010.1| cysteinyl-tRNA synthetase [Escherichia coli B799]
gi|386138267|gb|EIG79427.1| cysteine--tRNA ligase [Escherichia coli 1.2741]
gi|386148773|gb|EIG95208.1| cysteine--tRNA ligase [Escherichia coli 97.0246]
gi|386150253|gb|EIH01542.1| cysteine--tRNA ligase [Escherichia coli 5.0588]
gi|386157330|gb|EIH13672.1| cysteine--tRNA ligase [Escherichia coli 97.0259]
gi|386164115|gb|EIH25901.1| cysteine--tRNA ligase [Escherichia coli 1.2264]
gi|386169703|gb|EIH36211.1| cysteine--tRNA ligase [Escherichia coli 96.0497]
gi|386173114|gb|EIH45127.1| cysteine--tRNA ligase [Escherichia coli 99.0741]
gi|386177522|gb|EIH55001.1| cysteine--tRNA ligase [Escherichia coli 3.2608]
gi|386186462|gb|EIH69178.1| cysteine--tRNA ligase [Escherichia coli 93.0624]
gi|386200354|gb|EIH99345.1| cysteine--tRNA ligase [Escherichia coli 96.154]
gi|386206344|gb|EII10850.1| cysteine--tRNA ligase [Escherichia coli 5.0959]
gi|386209542|gb|EII20029.1| cysteine--tRNA ligase [Escherichia coli 9.0111]
gi|386230047|gb|EII57402.1| cysteine--tRNA ligase [Escherichia coli 3.3884]
gi|386247061|gb|EII93234.1| cysteine--tRNA ligase [Escherichia coli TW07793]
gi|388336699|gb|EIL03232.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388336807|gb|EIL03332.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388384180|gb|EIL45922.1| cysteinyl-tRNA synthetase [Escherichia coli KD1]
gi|388390266|gb|EIL51760.1| cysteinyl-tRNA synthetase [Escherichia coli 541-15]
gi|388404599|gb|EIL65053.1| cysteinyl-tRNA synthetase [Escherichia coli 541-1]
gi|388415693|gb|EIL75614.1| cysteinyl-tRNA synthetase [Escherichia coli HM605]
gi|388420608|gb|EIL80295.1| cysteinyl-tRNA synthetase [Escherichia coli CUMT8]
gi|391254410|gb|EIQ13572.1| cysteinyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|391259245|gb|EIQ18320.1| cysteinyl-tRNA synthetase [Shigella flexneri K-1770]
gi|391309675|gb|EIQ67343.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa12]
gi|391314928|gb|EIQ72466.1| cysteinyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|397787008|gb|EJK97839.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|397901123|gb|EJL17474.1| cysteinyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|404292676|gb|EJZ49476.1| cysteinyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|406779010|gb|AFS58434.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055593|gb|AFS75644.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064008|gb|AFS85055.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408218814|gb|EKI43002.1| cysteine--tRNA ligase [Escherichia coli 3006]
gi|408221724|gb|EKI45657.1| cysteine--tRNA ligase [Escherichia coli 07798]
gi|408231841|gb|EKI55102.1| cysteine--tRNA ligase [Escherichia coli N1]
gi|408347739|gb|EKJ61900.1| cysteine--tRNA ligase [Escherichia coli 0.1288]
gi|408457053|gb|EKJ80855.1| cysteinyl-tRNA synthetase [Escherichia coli AD30]
gi|412961767|emb|CCK45676.1| cysteine tRNA synthetase [Escherichia coli chi7122]
gi|412968381|emb|CCJ43001.1| cysteine tRNA synthetase [Escherichia coli]
gi|429351632|gb|EKY88352.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429352335|gb|EKY89051.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429353093|gb|EKY89802.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429367006|gb|EKZ03607.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429367917|gb|EKZ04509.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429370412|gb|EKZ06978.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429382799|gb|EKZ19263.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429385032|gb|EKZ21486.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429385555|gb|EKZ22008.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429397248|gb|EKZ33595.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429398865|gb|EKZ35192.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429399055|gb|EKZ35379.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410538|gb|EKZ46760.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412438|gb|EKZ48635.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419423|gb|EKZ55561.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427982|gb|EKZ64062.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429434826|gb|EKZ70850.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429435650|gb|EKZ71668.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429440191|gb|EKZ76170.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429444791|gb|EKZ80736.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429451096|gb|EKZ86988.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456588|gb|EKZ92433.1| cysteinyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|430879681|gb|ELC03012.1| cysteinyl-tRNA synthetase [Escherichia coli KTE4]
gi|430888964|gb|ELC11635.1| cysteinyl-tRNA synthetase [Escherichia coli KTE10]
gi|430891512|gb|ELC14048.1| cysteinyl-tRNA synthetase [Escherichia coli KTE5]
gi|430901505|gb|ELC23473.1| cysteinyl-tRNA synthetase [Escherichia coli KTE12]
gi|430938525|gb|ELC58766.1| cysteinyl-tRNA synthetase [Escherichia coli KTE39]
gi|430956259|gb|ELC74935.1| cysteinyl-tRNA synthetase [Escherichia coli KTE187]
gi|430966744|gb|ELC84107.1| cysteinyl-tRNA synthetase [Escherichia coli KTE188]
gi|430969645|gb|ELC86749.1| cysteinyl-tRNA synthetase [Escherichia coli KTE189]
gi|430974742|gb|ELC91658.1| cysteinyl-tRNA synthetase [Escherichia coli KTE193]
gi|430976334|gb|ELC93209.1| cysteinyl-tRNA synthetase [Escherichia coli KTE191]
gi|430985321|gb|ELD01927.1| cysteinyl-tRNA synthetase [Escherichia coli KTE201]
gi|430997288|gb|ELD13555.1| cysteinyl-tRNA synthetase [Escherichia coli KTE205]
gi|431000023|gb|ELD16097.1| cysteinyl-tRNA synthetase [Escherichia coli KTE206]
gi|431010896|gb|ELD25240.1| cysteinyl-tRNA synthetase [Escherichia coli KTE210]
gi|431013004|gb|ELD26752.1| cysteinyl-tRNA synthetase [Escherichia coli KTE213]
gi|431018648|gb|ELD32079.1| cysteinyl-tRNA synthetase [Escherichia coli KTE212]
gi|431027905|gb|ELD40950.1| cysteinyl-tRNA synthetase [Escherichia coli KTE214]
gi|431042231|gb|ELD52723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE220]
gi|431054793|gb|ELD64362.1| cysteinyl-tRNA synthetase [Escherichia coli KTE230]
gi|431056970|gb|ELD66448.1| cysteinyl-tRNA synthetase [Escherichia coli KTE233]
gi|431063899|gb|ELD73113.1| cysteinyl-tRNA synthetase [Escherichia coli KTE234]
gi|431078419|gb|ELD85477.1| cysteinyl-tRNA synthetase [Escherichia coli KTE236]
gi|431085419|gb|ELD91532.1| cysteinyl-tRNA synthetase [Escherichia coli KTE237]
gi|431086820|gb|ELD92836.1| cysteinyl-tRNA synthetase [Escherichia coli KTE47]
gi|431103192|gb|ELE07862.1| cysteinyl-tRNA synthetase [Escherichia coli KTE53]
gi|431108902|gb|ELE12873.1| cysteinyl-tRNA synthetase [Escherichia coli KTE56]
gi|431110859|gb|ELE14776.1| cysteinyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119651|gb|ELE22650.1| cysteinyl-tRNA synthetase [Escherichia coli KTE57]
gi|431124105|gb|ELE26759.1| cysteinyl-tRNA synthetase [Escherichia coli KTE58]
gi|431133083|gb|ELE35081.1| cysteinyl-tRNA synthetase [Escherichia coli KTE60]
gi|431134078|gb|ELE36044.1| cysteinyl-tRNA synthetase [Escherichia coli KTE62]
gi|431140627|gb|ELE42393.1| cysteinyl-tRNA synthetase [Escherichia coli KTE67]
gi|431143745|gb|ELE45461.1| cysteinyl-tRNA synthetase [Escherichia coli KTE66]
gi|431162988|gb|ELE63428.1| cysteinyl-tRNA synthetase [Escherichia coli KTE76]
gi|431193420|gb|ELE92756.1| cysteinyl-tRNA synthetase [Escherichia coli KTE87]
gi|431207283|gb|ELF05547.1| cysteinyl-tRNA synthetase [Escherichia coli KTE142]
gi|431213841|gb|ELF11697.1| cysteinyl-tRNA synthetase [Escherichia coli KTE119]
gi|431225147|gb|ELF22356.1| cysteinyl-tRNA synthetase [Escherichia coli KTE143]
gi|431259759|gb|ELF52122.1| cysteinyl-tRNA synthetase [Escherichia coli KTE8]
gi|431267141|gb|ELF58674.1| cysteinyl-tRNA synthetase [Escherichia coli KTE9]
gi|431278157|gb|ELF69151.1| cysteinyl-tRNA synthetase [Escherichia coli KTE45]
gi|431300719|gb|ELF90270.1| cysteinyl-tRNA synthetase [Escherichia coli KTE29]
gi|431305704|gb|ELF94025.1| cysteinyl-tRNA synthetase [Escherichia coli KTE22]
gi|431311537|gb|ELF99695.1| cysteinyl-tRNA synthetase [Escherichia coli KTE46]
gi|431313466|gb|ELG01439.1| cysteinyl-tRNA synthetase [Escherichia coli KTE48]
gi|431318910|gb|ELG06603.1| cysteinyl-tRNA synthetase [Escherichia coli KTE50]
gi|431320826|gb|ELG08456.1| cysteinyl-tRNA synthetase [Escherichia coli KTE54]
gi|431330952|gb|ELG18216.1| cysteinyl-tRNA synthetase [Escherichia coli KTE59]
gi|431332140|gb|ELG19383.1| cysteinyl-tRNA synthetase [Escherichia coli KTE63]
gi|431342105|gb|ELG29101.1| cysteinyl-tRNA synthetase [Escherichia coli KTE65]
gi|431351000|gb|ELG37798.1| cysteinyl-tRNA synthetase [Escherichia coli KTE84]
gi|431357523|gb|ELG44190.1| cysteinyl-tRNA synthetase [Escherichia coli KTE101]
gi|431357938|gb|ELG44604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE91]
gi|431369041|gb|ELG55272.1| cysteinyl-tRNA synthetase [Escherichia coli KTE115]
gi|431370847|gb|ELG56640.1| cysteinyl-tRNA synthetase [Escherichia coli KTE118]
gi|431375358|gb|ELG60702.1| cysteinyl-tRNA synthetase [Escherichia coli KTE123]
gi|431380272|gb|ELG65172.1| cysteinyl-tRNA synthetase [Escherichia coli KTE135]
gi|431388736|gb|ELG72459.1| cysteinyl-tRNA synthetase [Escherichia coli KTE136]
gi|431391977|gb|ELG75581.1| cysteinyl-tRNA synthetase [Escherichia coli KTE140]
gi|431397336|gb|ELG80792.1| cysteinyl-tRNA synthetase [Escherichia coli KTE141]
gi|431401975|gb|ELG85296.1| cysteinyl-tRNA synthetase [Escherichia coli KTE144]
gi|431405292|gb|ELG88535.1| cysteinyl-tRNA synthetase [Escherichia coli KTE147]
gi|431407927|gb|ELG91124.1| cysteinyl-tRNA synthetase [Escherichia coli KTE146]
gi|431413639|gb|ELG96404.1| cysteinyl-tRNA synthetase [Escherichia coli KTE154]
gi|431429444|gb|ELH11372.1| cysteinyl-tRNA synthetase [Escherichia coli KTE192]
gi|431456894|gb|ELH37237.1| cysteinyl-tRNA synthetase [Escherichia coli KTE184]
gi|431474459|gb|ELH54276.1| cysteinyl-tRNA synthetase [Escherichia coli KTE203]
gi|431478482|gb|ELH58229.1| cysteinyl-tRNA synthetase [Escherichia coli KTE202]
gi|431482346|gb|ELH62049.1| cysteinyl-tRNA synthetase [Escherichia coli KTE209]
gi|431509650|gb|ELH87899.1| cysteinyl-tRNA synthetase [Escherichia coli KTE218]
gi|431514304|gb|ELH92146.1| cysteinyl-tRNA synthetase [Escherichia coli KTE223]
gi|431517373|gb|ELH94895.1| cysteinyl-tRNA synthetase [Escherichia coli KTE227]
gi|431519473|gb|ELH96925.1| cysteinyl-tRNA synthetase [Escherichia coli KTE229]
gi|431536031|gb|ELI12366.1| cysteinyl-tRNA synthetase [Escherichia coli KTE104]
gi|431541154|gb|ELI16604.1| cysteinyl-tRNA synthetase [Escherichia coli KTE106]
gi|431545638|gb|ELI20285.1| cysteinyl-tRNA synthetase [Escherichia coli KTE109]
gi|431559816|gb|ELI33353.1| cysteinyl-tRNA synthetase [Escherichia coli KTE112]
gi|431574302|gb|ELI47084.1| cysteinyl-tRNA synthetase [Escherichia coli KTE124]
gi|431587891|gb|ELI59241.1| cysteinyl-tRNA synthetase [Escherichia coli KTE125]
gi|431593761|gb|ELI64053.1| cysteinyl-tRNA synthetase [Escherichia coli KTE129]
gi|431601298|gb|ELI70815.1| cysteinyl-tRNA synthetase [Escherichia coli KTE131]
gi|431610286|gb|ELI79587.1| cysteinyl-tRNA synthetase [Escherichia coli KTE137]
gi|431614769|gb|ELI83904.1| cysteinyl-tRNA synthetase [Escherichia coli KTE138]
gi|431636972|gb|ELJ05091.1| cysteinyl-tRNA synthetase [Escherichia coli KTE153]
gi|431649422|gb|ELJ16780.1| cysteinyl-tRNA synthetase [Escherichia coli KTE157]
gi|431650192|gb|ELJ17529.1| cysteinyl-tRNA synthetase [Escherichia coli KTE160]
gi|431651716|gb|ELJ18955.1| cysteinyl-tRNA synthetase [Escherichia coli KTE163]
gi|431663481|gb|ELJ30243.1| cysteinyl-tRNA synthetase [Escherichia coli KTE166]
gi|431665119|gb|ELJ31846.1| cysteinyl-tRNA synthetase [Escherichia coli KTE167]
gi|431676871|gb|ELJ42954.1| cysteinyl-tRNA synthetase [Escherichia coli KTE174]
gi|431678726|gb|ELJ44722.1| cysteinyl-tRNA synthetase [Escherichia coli KTE176]
gi|431692379|gb|ELJ57817.1| cysteinyl-tRNA synthetase [Escherichia coli KTE179]
gi|431694270|gb|ELJ59655.1| cysteinyl-tRNA synthetase [Escherichia coli KTE180]
gi|431696333|gb|ELJ61520.1| cysteinyl-tRNA synthetase [Escherichia coli KTE232]
gi|431711954|gb|ELJ76261.1| cysteinyl-tRNA synthetase [Escherichia coli KTE85]
gi|431721168|gb|ELJ85164.1| cysteinyl-tRNA synthetase [Escherichia coli KTE90]
gi|431725339|gb|ELJ89193.1| cysteinyl-tRNA synthetase [Escherichia coli KTE94]
gi|431726189|gb|ELJ90006.1| cysteinyl-tRNA synthetase [Escherichia coli KTE95]
gi|431733227|gb|ELJ96668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE97]
gi|431736105|gb|ELJ99447.1| cysteinyl-tRNA synthetase [Escherichia coli KTE99]
gi|432345151|gb|ELL39671.1| cysteinyl-tRNA synthetase [Escherichia coli J96]
gi|441653817|emb|CCQ01296.1| Cysteinyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443421055|gb|AGC85959.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O78]
gi|449322524|gb|EMD12513.1| cysteinyl-tRNA synthetase [Escherichia coli O08]
gi|449324848|gb|EMD14770.1| cysteinyl-tRNA synthetase [Escherichia coli SEPT362]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|359449072|ref|ZP_09238573.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358045104|dbj|GAA74822.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/480 (45%), Positives = 304/480 (63%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR Y++
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N ESI LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IEMVERLIAKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGARVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS NF T+RD+LK+Y+PE +R+F++
Sbjct: 235 HENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++D+ I + ++ NE +F AM+DDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECE--LESNE-FVIKFRKAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLK-----NNI 411
TP A+ +LF+LA +N+ K + ++A LR +G LG+ + + + FL+ N +
Sbjct: 352 TPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQGGQDDNEV 411
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T I+ I R+EAR K++ AD+ R L G+ILED GKT WR+
Sbjct: 412 AT------------IEALIVKRNEARASKDWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|386020696|ref|YP_005938720.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
Length = 462
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/477 (46%), Positives = 291/477 (61%), Gaps = 25/477 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ S+ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR
Sbjct: 1 MMALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
+ MI+ LI G AY NG DV Y V F+ YGKLS R I E +
Sbjct: 121 AGMHTMIQTLIDKGFAYAPGNG----DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL
Sbjct: 177 KEDPLDFVLWKGAKPGEP---SWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+
Sbjct: 234 FPHHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
++ SHYRS INYSE L AK +L R Y +K +P+ + RF M+D
Sbjct: 294 LLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAG----GDEFVARFAAVMDD 349
Query: 360 DFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFN+P A ++LF++ +N+ + +A +L+ L LG+L+ FL+
Sbjct: 350 DFNSPEACAVLFEMIREVNRLRESDLTAAAALAARLKELAGVLGVLQLEPGAFLQAGA-- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 408 --AGKVDAAE--VEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGKGGTT-WR 459
>gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|386279546|ref|ZP_10057227.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386703743|ref|YP_006167590.1| cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|415777054|ref|ZP_11488306.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|417260547|ref|ZP_12048045.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|417270680|ref|ZP_12058033.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|417275430|ref|ZP_12062767.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|417633016|ref|ZP_12283236.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|418301374|ref|ZP_12913168.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|419141063|ref|ZP_13685819.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|419146464|ref|ZP_13691160.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|419152376|ref|ZP_13696963.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|419157860|ref|ZP_13702384.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|419162789|ref|ZP_13707268.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812720|ref|ZP_14337583.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422791338|ref|ZP_16844041.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|422816537|ref|ZP_16864752.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|425113893|ref|ZP_18515724.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|425118657|ref|ZP_18520387.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|425271229|ref|ZP_18662737.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|425281903|ref|ZP_18673019.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|432415475|ref|ZP_19658106.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|432626107|ref|ZP_19862092.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|432635837|ref|ZP_19871723.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|432659767|ref|ZP_19895427.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|432684365|ref|ZP_19919683.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|432690413|ref|ZP_19925659.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|432703095|ref|ZP_19938221.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|432953686|ref|ZP_20145956.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|339413472|gb|AEJ55144.1| cysteinyl-tRNA synthetase [Escherichia coli UMNF18]
gi|345390686|gb|EGX20483.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|377999531|gb|EHV62610.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6A]
gi|378001392|gb|EHV64451.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6B]
gi|378003357|gb|EHV66400.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6C]
gi|378013846|gb|EHV76761.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6D]
gi|378016379|gb|EHV79260.1| cysteinyl-tRNA synthetase [Escherichia coli DEC6E]
gi|383101911|gb|AFG39420.1| Cysteinyl-tRNA synthetase [Escherichia coli P12b]
gi|385154446|gb|EIF16459.1| cysteinyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385540010|gb|EIF86837.1| cysteinyl-tRNA synthetase [Escherichia coli M919]
gi|386123545|gb|EIG72141.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386225705|gb|EII48030.1| cysteine--tRNA ligase [Escherichia coli 2.3916]
gi|386237023|gb|EII68995.1| cysteine--tRNA ligase [Escherichia coli 2.4168]
gi|386242083|gb|EII78996.1| cysteine--tRNA ligase [Escherichia coli 3.2303]
gi|408198513|gb|EKI23739.1| cysteine--tRNA ligase [Escherichia coli TW15901]
gi|408205859|gb|EKI30689.1| cysteine--tRNA ligase [Escherichia coli TW00353]
gi|408572824|gb|EKK48706.1| cysteine--tRNA ligase [Escherichia coli 8.0566]
gi|408573418|gb|EKK49269.1| cysteine--tRNA ligase [Escherichia coli 8.0569]
gi|430943851|gb|ELC63957.1| cysteinyl-tRNA synthetase [Escherichia coli KTE44]
gi|431165242|gb|ELE65600.1| cysteinyl-tRNA synthetase [Escherichia coli KTE77]
gi|431174119|gb|ELE74180.1| cysteinyl-tRNA synthetase [Escherichia coli KTE81]
gi|431203377|gb|ELF02035.1| cysteinyl-tRNA synthetase [Escherichia coli KTE111]
gi|431224783|gb|ELF21993.1| cysteinyl-tRNA synthetase [Escherichia coli KTE156]
gi|431230901|gb|ELF26671.1| cysteinyl-tRNA synthetase [Escherichia coli KTE161]
gi|431247226|gb|ELF41468.1| cysteinyl-tRNA synthetase [Escherichia coli KTE171]
gi|431470182|gb|ELH50105.1| cysteinyl-tRNA synthetase [Escherichia coli KTE197]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADGSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLNNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|308185969|ref|YP_003930100.1| cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308056479|gb|ADO08651.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 500
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/478 (46%), Positives = 303/478 (63%), Gaps = 25/478 (5%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+IYN+ SR+K+ F PI GK+ +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 39 SMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY 98
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
+ YVRNITDIDDKII A +N ESI+TLT+R I D L I PPD +P AT +I
Sbjct: 99 QLNYVRNITDIDDKIIKRANENGESIETLTNRMIGEMHNDFAALGILPPDEEPRATRHIA 158
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+++++ LI AY +NG DV + V + +YG LS + L E + K
Sbjct: 159 EIIELVQTLIARNHAYVADNG----DVMFDVLSDTDYGALSRQDLEQLQAGARVEVADVK 214
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK ++P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL F
Sbjct: 215 RNPMDFVLWKMSKADEPA---WSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 271
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F
Sbjct: 272 PHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQHYDAETVRYF 331
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NY E LN A+ +L RLY A++ + E RF AM+DD
Sbjct: 332 LMSGHYRSQLNYGEDNLNQARAALERLYTALR---HTDSSVKAHGGEAFEARFRSAMDDD 388
Query: 361 FNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ KS +A +LR + N LG+L+ + FL++
Sbjct: 389 FNTPEAYSVLFDMAREVNRLKSEDGASAHGLASKLREMANVLGILQQDPELFLQSG---- 444
Query: 415 RKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ + R++AR K + EAD R +L G+I+ED P G + WRR
Sbjct: 445 --AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVEDGPQGSS-WRR 499
>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209397071|ref|YP_002269179.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|291281437|ref|YP_003498255.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387505547|ref|YP_006157803.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387881125|ref|YP_006311427.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416313090|ref|ZP_11658025.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|416316906|ref|ZP_11660038.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|416325524|ref|ZP_11665932.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|416780688|ref|ZP_11876986.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416791781|ref|ZP_11881885.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416803464|ref|ZP_11886776.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416814018|ref|ZP_11891462.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416824091|ref|ZP_11895980.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416835122|ref|ZP_11901349.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419043251|ref|ZP_13590227.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|419049144|ref|ZP_13596061.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419055199|ref|ZP_13602055.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419060792|ref|ZP_13607576.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|419066698|ref|ZP_13613352.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|419073826|ref|ZP_13619398.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419078890|ref|ZP_13624373.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419084511|ref|ZP_13629925.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419090569|ref|ZP_13635888.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|419096679|ref|ZP_13641923.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|419102276|ref|ZP_13647442.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419107627|ref|ZP_13652737.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|419113393|ref|ZP_13658428.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|419118975|ref|ZP_13663959.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|419127178|ref|ZP_13672057.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|419130196|ref|ZP_13675049.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|419134957|ref|ZP_13679765.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|420267922|ref|ZP_14770329.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|420273603|ref|ZP_14775936.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|420278692|ref|ZP_14780959.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|420286388|ref|ZP_14788591.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|420290673|ref|ZP_14792838.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|420296512|ref|ZP_14798607.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|420302486|ref|ZP_14804516.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|420308017|ref|ZP_14809990.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|420313272|ref|ZP_14815180.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|421810767|ref|ZP_16246576.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|421816855|ref|ZP_16252417.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|421822243|ref|ZP_16257680.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|421828974|ref|ZP_16264303.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|423658502|ref|ZP_17633799.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|424075405|ref|ZP_17812766.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|424081733|ref|ZP_17818606.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|424088357|ref|ZP_17824627.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|424094572|ref|ZP_17830344.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|424100974|ref|ZP_17836150.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|424107789|ref|ZP_17842381.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|424113778|ref|ZP_17847942.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|424119840|ref|ZP_17853566.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|424126095|ref|ZP_17859310.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|424138726|ref|ZP_17871035.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|424145170|ref|ZP_17876954.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|424151314|ref|ZP_17882582.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|424185053|ref|ZP_17888017.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|424267094|ref|ZP_17893917.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|424422510|ref|ZP_17899647.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|424453720|ref|ZP_17905272.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|424460023|ref|ZP_17910974.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|424466492|ref|ZP_17916695.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|424473053|ref|ZP_17922742.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|424479001|ref|ZP_17928261.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|424485067|ref|ZP_17933948.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|424491202|ref|ZP_17939604.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|424498277|ref|ZP_17945566.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|424504513|ref|ZP_17951304.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|424510767|ref|ZP_17957015.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|424518332|ref|ZP_17962776.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|424524165|ref|ZP_17968202.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|424530371|ref|ZP_17974013.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|424536346|ref|ZP_17979623.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|424542256|ref|ZP_17985089.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|424548576|ref|ZP_17990797.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|424554844|ref|ZP_17996577.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|424561189|ref|ZP_18002488.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|424567218|ref|ZP_18008147.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|424573404|ref|ZP_18013842.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|424579358|ref|ZP_18019305.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|425096036|ref|ZP_18499072.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|425102172|ref|ZP_18504834.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|425107971|ref|ZP_18510235.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|425123800|ref|ZP_18525390.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|425129836|ref|ZP_18530948.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|425136173|ref|ZP_18536909.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|425142078|ref|ZP_18542378.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|425148392|ref|ZP_18548299.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|425154011|ref|ZP_18553571.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|425160458|ref|ZP_18559645.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|425165967|ref|ZP_18564789.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|425172262|ref|ZP_18570672.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|425184291|ref|ZP_18581927.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|425191041|ref|ZP_18588181.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|425197374|ref|ZP_18594036.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|425204032|ref|ZP_18600173.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|425209788|ref|ZP_18605535.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|425215828|ref|ZP_18611158.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|425222402|ref|ZP_18617272.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|425228643|ref|ZP_18623050.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|425234944|ref|ZP_18628916.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|425240946|ref|ZP_18634592.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|425247066|ref|ZP_18640288.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|425252799|ref|ZP_18645688.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|425259111|ref|ZP_18651486.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|425265214|ref|ZP_18657146.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|425292673|ref|ZP_18683266.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|425309409|ref|ZP_18698886.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|425315327|ref|ZP_18704413.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|425321382|ref|ZP_18710063.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|425327573|ref|ZP_18715806.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|425333759|ref|ZP_18721490.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|425340177|ref|ZP_18727429.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|425346052|ref|ZP_18732864.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|425352271|ref|ZP_18738660.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|425358264|ref|ZP_18744246.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|425364367|ref|ZP_18749927.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|425370818|ref|ZP_18755789.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|425383609|ref|ZP_18767497.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|425390305|ref|ZP_18773773.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|425396427|ref|ZP_18779482.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|425402413|ref|ZP_18785025.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|425408952|ref|ZP_18791116.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|425415230|ref|ZP_18796876.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|425426375|ref|ZP_18807433.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|428945035|ref|ZP_19017687.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|428951187|ref|ZP_19023326.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|428957044|ref|ZP_19028746.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|428963369|ref|ZP_19034561.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|428969533|ref|ZP_19040172.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|428975982|ref|ZP_19046160.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|428981706|ref|ZP_19051446.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|428987987|ref|ZP_19057283.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|428993801|ref|ZP_19062712.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|428999904|ref|ZP_19068415.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|429006146|ref|ZP_19074062.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|429012485|ref|ZP_19079742.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|429018693|ref|ZP_19085479.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|429024374|ref|ZP_19090790.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|429030691|ref|ZP_19096572.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|429036880|ref|ZP_19102323.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|429042795|ref|ZP_19107804.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|429048599|ref|ZP_19113258.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|429053964|ref|ZP_19118457.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|429059639|ref|ZP_19123787.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|429065104|ref|ZP_19128968.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429071666|ref|ZP_19135022.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|429076986|ref|ZP_19140205.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|429824162|ref|ZP_19355669.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429830525|ref|ZP_19361385.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444922864|ref|ZP_21242583.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444929179|ref|ZP_21248332.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444934530|ref|ZP_21253473.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444940108|ref|ZP_21258756.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444945697|ref|ZP_21264118.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444951256|ref|ZP_21269481.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444962013|ref|ZP_21279766.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444967744|ref|ZP_21285220.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444973246|ref|ZP_21290528.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444978787|ref|ZP_21295783.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444984081|ref|ZP_21300950.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444989325|ref|ZP_21306065.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444994678|ref|ZP_21311274.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|445000176|ref|ZP_21316639.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|445005633|ref|ZP_21321973.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|445010804|ref|ZP_21326996.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|445016582|ref|ZP_21332632.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|445022033|ref|ZP_21337955.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|445027273|ref|ZP_21343052.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|445032769|ref|ZP_21348394.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|445038463|ref|ZP_21353933.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|445043676|ref|ZP_21359015.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|445049249|ref|ZP_21364418.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|445054899|ref|ZP_21369851.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
gi|452969873|ref|ZP_21968100.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4009]
gi|21264001|sp|Q8XCT9.1|SYC_ECO57 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710840|sp|B5YPP1.1|SYC_ECO5E RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|374357541|gb|AEZ39248.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377900868|gb|EHU65194.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3A]
gi|377901968|gb|EHU66277.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377913697|gb|EHU77829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377918173|gb|EHU82224.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3D]
gi|377920349|gb|EHU84370.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377931796|gb|EHU95655.1| cysteinyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377933977|gb|EHU97817.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377939220|gb|EHV02976.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377949522|gb|EHV13154.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377951579|gb|EHV15198.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4D]
gi|377954097|gb|EHV17657.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377966184|gb|EHV29597.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377967498|gb|EHV30904.1| cysteinyl-tRNA synthetase [Escherichia coli DEC4F]
gi|377973176|gb|EHV36519.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5B]
gi|377973203|gb|EHV36545.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5C]
gi|377981570|gb|EHV44829.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5D]
gi|377987963|gb|EHV51146.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|386794583|gb|AFJ27617.1| cysteinyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|390650777|gb|EIN29167.1| cysteine--tRNA ligase [Escherichia coli FRIK1996]
gi|390652731|gb|EIN30916.1| cysteine--tRNA ligase [Escherichia coli FDA517]
gi|390653268|gb|EIN31426.1| cysteine--tRNA ligase [Escherichia coli FDA505]
gi|390669715|gb|EIN46323.1| cysteine--tRNA ligase [Escherichia coli 93-001]
gi|390672808|gb|EIN49069.1| cysteine--tRNA ligase [Escherichia coli FRIK1990]
gi|390673820|gb|EIN50038.1| cysteine--tRNA ligase [Escherichia coli FRIK1985]
gi|390688595|gb|EIN63641.1| cysteine--tRNA ligase [Escherichia coli PA3]
gi|390692098|gb|EIN66808.1| cysteine--tRNA ligase [Escherichia coli PA9]
gi|390692968|gb|EIN67620.1| cysteine--tRNA ligase [Escherichia coli PA5]
gi|390710108|gb|EIN83140.1| cysteine--tRNA ligase [Escherichia coli PA15]
gi|390712657|gb|EIN85608.1| cysteine--tRNA ligase [Escherichia coli PA14]
gi|390720402|gb|EIN93114.1| cysteine--tRNA ligase [Escherichia coli PA22]
gi|390733459|gb|EIO05038.1| cysteine--tRNA ligase [Escherichia coli PA25]
gi|390733640|gb|EIO05207.1| cysteine--tRNA ligase [Escherichia coli PA24]
gi|390736822|gb|EIO08144.1| cysteine--tRNA ligase [Escherichia coli PA28]
gi|390751986|gb|EIO21847.1| cysteine--tRNA ligase [Escherichia coli PA31]
gi|390752574|gb|EIO22402.1| cysteine--tRNA ligase [Escherichia coli PA32]
gi|390754888|gb|EIO24444.1| cysteine--tRNA ligase [Escherichia coli PA33]
gi|390762521|gb|EIO31779.1| cysteine--tRNA ligase [Escherichia coli PA40]
gi|390776062|gb|EIO44031.1| cysteine--tRNA ligase [Escherichia coli PA41]
gi|390777986|gb|EIO45758.1| cysteine--tRNA ligase [Escherichia coli PA42]
gi|390783774|gb|EIO51364.1| cysteine--tRNA ligase [Escherichia coli PA39]
gi|390785666|gb|EIO53208.1| cysteine--tRNA ligase [Escherichia coli TW06591]
gi|390792034|gb|EIO59397.1| cysteine--tRNA ligase [Escherichia coli TW10246]
gi|390801904|gb|EIO68955.1| cysteine--tRNA ligase [Escherichia coli TW11039]
gi|390809673|gb|EIO76456.1| cysteine--tRNA ligase [Escherichia coli TW07945]
gi|390811463|gb|EIO78170.1| cysteine--tRNA ligase [Escherichia coli TW09109]
gi|390819156|gb|EIO85505.1| cysteine--tRNA ligase [Escherichia coli TW10119]
gi|390822915|gb|EIO89000.1| cysteine--tRNA ligase [Escherichia coli TW09098]
gi|390837150|gb|EIP01592.1| cysteine--tRNA ligase [Escherichia coli EC4203]
gi|390839982|gb|EIP04057.1| cysteine--tRNA ligase [Escherichia coli EC4196]
gi|390841823|gb|EIP05710.1| cysteine--tRNA ligase [Escherichia coli TW09195]
gi|390855612|gb|EIP18302.1| cysteine--tRNA ligase [Escherichia coli TW14301]
gi|390859718|gb|EIP22057.1| cysteine--tRNA ligase [Escherichia coli EC4421]
gi|390860107|gb|EIP22433.1| cysteine--tRNA ligase [Escherichia coli TW14313]
gi|390871585|gb|EIP32983.1| cysteine--tRNA ligase [Escherichia coli EC4422]
gi|390876160|gb|EIP37154.1| cysteine--tRNA ligase [Escherichia coli EC4013]
gi|390886063|gb|EIP46217.1| cysteine--tRNA ligase [Escherichia coli EC4402]
gi|390888064|gb|EIP47970.1| cysteine--tRNA ligase [Escherichia coli EC4439]
gi|390894587|gb|EIP54089.1| cysteine--tRNA ligase [Escherichia coli EC4436]
gi|390903720|gb|EIP62761.1| cysteine--tRNA ligase [Escherichia coli EC1738]
gi|390910369|gb|EIP69110.1| cysteine--tRNA ligase [Escherichia coli EC4437]
gi|390911837|gb|EIP70518.1| cysteine--tRNA ligase [Escherichia coli EC1734]
gi|390915057|gb|EIP73580.1| cysteine--tRNA ligase [Escherichia coli EC4448]
gi|390924815|gb|EIP82557.1| cysteine--tRNA ligase [Escherichia coli EC1863]
gi|390926145|gb|EIP83744.1| cysteine--tRNA ligase [Escherichia coli EC1845]
gi|408071980|gb|EKH06305.1| cysteine--tRNA ligase [Escherichia coli PA7]
gi|408075425|gb|EKH09657.1| cysteine--tRNA ligase [Escherichia coli FRIK920]
gi|408086000|gb|EKH19557.1| cysteine--tRNA ligase [Escherichia coli PA34]
gi|408090098|gb|EKH23377.1| cysteine--tRNA ligase [Escherichia coli FDA506]
gi|408095488|gb|EKH28464.1| cysteine--tRNA ligase [Escherichia coli FDA507]
gi|408102441|gb|EKH34850.1| cysteine--tRNA ligase [Escherichia coli FDA504]
gi|408116641|gb|EKH47923.1| cysteine--tRNA ligase [Escherichia coli FRIK1997]
gi|408122122|gb|EKH53006.1| cysteine--tRNA ligase [Escherichia coli NE1487]
gi|408130229|gb|EKH60390.1| cysteine--tRNA ligase [Escherichia coli NE037]
gi|408132284|gb|EKH62273.1| cysteine--tRNA ligase [Escherichia coli FRIK2001]
gi|408141508|gb|EKH70976.1| cysteine--tRNA ligase [Escherichia coli PA4]
gi|408150296|gb|EKH78894.1| cysteine--tRNA ligase [Escherichia coli PA23]
gi|408152772|gb|EKH81193.1| cysteine--tRNA ligase [Escherichia coli PA49]
gi|408158068|gb|EKH86205.1| cysteine--tRNA ligase [Escherichia coli PA45]
gi|408166906|gb|EKH94446.1| cysteine--tRNA ligase [Escherichia coli TT12B]
gi|408172216|gb|EKH99296.1| cysteine--tRNA ligase [Escherichia coli MA6]
gi|408174594|gb|EKI01569.1| cysteine--tRNA ligase [Escherichia coli 5905]
gi|408186998|gb|EKI12991.1| cysteine--tRNA ligase [Escherichia coli CB7326]
gi|408191909|gb|EKI17504.1| cysteine--tRNA ligase [Escherichia coli EC96038]
gi|408191966|gb|EKI17555.1| cysteine--tRNA ligase [Escherichia coli 5412]
gi|408233008|gb|EKI56159.1| cysteine--tRNA ligase [Escherichia coli PA38]
gi|408239030|gb|EKI61795.1| cysteine--tRNA ligase [Escherichia coli EC1735]
gi|408249030|gb|EKI70991.1| cysteine--tRNA ligase [Escherichia coli EC1736]
gi|408253092|gb|EKI74708.1| cysteine--tRNA ligase [Escherichia coli EC1737]
gi|408259490|gb|EKI80667.1| cysteine--tRNA ligase [Escherichia coli EC1846]
gi|408268363|gb|EKI88743.1| cysteine--tRNA ligase [Escherichia coli EC1847]
gi|408269982|gb|EKI90207.1| cysteine--tRNA ligase [Escherichia coli EC1848]
gi|408278886|gb|EKI98561.1| cysteine--tRNA ligase [Escherichia coli EC1849]
gi|408285285|gb|EKJ04329.1| cysteine--tRNA ligase [Escherichia coli EC1850]
gi|408287790|gb|EKJ06641.1| cysteine--tRNA ligase [Escherichia coli EC1856]
gi|408300524|gb|EKJ18217.1| cysteine--tRNA ligase [Escherichia coli EC1862]
gi|408300942|gb|EKJ18617.1| cysteine--tRNA ligase [Escherichia coli EC1864]
gi|408318019|gb|EKJ34244.1| cysteine--tRNA ligase [Escherichia coli EC1868]
gi|408318077|gb|EKJ34294.1| cysteine--tRNA ligase [Escherichia coli EC1866]
gi|408331424|gb|EKJ46595.1| cysteine--tRNA ligase [Escherichia coli EC1869]
gi|408336739|gb|EKJ51489.1| cysteine--tRNA ligase [Escherichia coli NE098]
gi|408338133|gb|EKJ52794.1| cysteine--tRNA ligase [Escherichia coli EC1870]
gi|408350506|gb|EKJ64373.1| cysteine--tRNA ligase [Escherichia coli FRIK523]
gi|408353100|gb|EKJ66624.1| cysteine--tRNA ligase [Escherichia coli 0.1304]
gi|408558784|gb|EKK35142.1| cysteine--tRNA ligase [Escherichia coli 5.2239]
gi|408559209|gb|EKK35551.1| cysteine--tRNA ligase [Escherichia coli 3.4870]
gi|408560107|gb|EKK36388.1| cysteine--tRNA ligase [Escherichia coli 6.0172]
gi|408585274|gb|EKK60165.1| cysteine--tRNA ligase [Escherichia coli 8.0586]
gi|408590183|gb|EKK64674.1| cysteine--tRNA ligase [Escherichia coli 8.2524]
gi|408591951|gb|EKK66355.1| cysteine--tRNA ligase [Escherichia coli 10.0833]
gi|408604153|gb|EKK77745.1| cysteine--tRNA ligase [Escherichia coli 10.0869]
gi|408605733|gb|EKK79226.1| cysteine--tRNA ligase [Escherichia coli 8.0416]
gi|408610407|gb|EKK83779.1| cysteine--tRNA ligase [Escherichia coli 88.0221]
gi|408617074|gb|EKK90201.1| cysteine--tRNA ligase [Escherichia coli 10.0821]
gi|427214570|gb|EKV83868.1| cysteine--tRNA ligase [Escherichia coli 88.1042]
gi|427216846|gb|EKV85939.1| cysteine--tRNA ligase [Escherichia coli 89.0511]
gi|427217114|gb|EKV86187.1| cysteine--tRNA ligase [Escherichia coli 88.1467]
gi|427233881|gb|EKW01600.1| cysteine--tRNA ligase [Escherichia coli 90.2281]
gi|427233952|gb|EKW01662.1| cysteine--tRNA ligase [Escherichia coli 90.0039]
gi|427236143|gb|EKW03739.1| cysteine--tRNA ligase [Escherichia coli 90.0091]
gi|427251392|gb|EKW17971.1| cysteine--tRNA ligase [Escherichia coli 93.0056]
gi|427252944|gb|EKW19403.1| cysteine--tRNA ligase [Escherichia coli 93.0055]
gi|427254045|gb|EKW20420.1| cysteine--tRNA ligase [Escherichia coli 94.0618]
gi|427270248|gb|EKW35139.1| cysteine--tRNA ligase [Escherichia coli 95.0943]
gi|427270732|gb|EKW35605.1| cysteine--tRNA ligase [Escherichia coli 95.0183]
gi|427275842|gb|EKW40436.1| cysteine--tRNA ligase [Escherichia coli 95.1288]
gi|427286257|gb|EKW50113.1| cysteine--tRNA ligase [Escherichia coli 96.0428]
gi|427291969|gb|EKW55334.1| cysteine--tRNA ligase [Escherichia coli 96.0427]
gi|427293714|gb|EKW56954.1| cysteine--tRNA ligase [Escherichia coli 96.0939]
gi|427304690|gb|EKW67320.1| cysteine--tRNA ligase [Escherichia coli 97.0003]
gi|427306228|gb|EKW68767.1| cysteine--tRNA ligase [Escherichia coli 96.0932]
gi|427310676|gb|EKW72913.1| cysteine--tRNA ligase [Escherichia coli 96.0107]
gi|427321491|gb|EKW83180.1| cysteine--tRNA ligase [Escherichia coli 97.1742]
gi|427322234|gb|EKW83875.1| cysteine--tRNA ligase [Escherichia coli 97.0007]
gi|427334224|gb|EKW95301.1| cysteine--tRNA ligase [Escherichia coli 99.0713]
gi|427334272|gb|EKW95345.1| cysteine--tRNA ligase [Escherichia coli 99.0678]
gi|427336753|gb|EKW97707.1| cysteine--tRNA ligase [Escherichia coli 99.0672]
gi|429260091|gb|EKY43702.1| cysteine--tRNA ligase [Escherichia coli 96.0109]
gi|429261797|gb|EKY45196.1| cysteine--tRNA ligase [Escherichia coli 97.0010]
gi|444542382|gb|ELV21747.1| cysteine--tRNA ligase [Escherichia coli 99.0814]
gi|444550651|gb|ELV28705.1| cysteine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444551750|gb|ELV29635.1| cysteine--tRNA ligase [Escherichia coli 99.0815]
gi|444564861|gb|ELV41771.1| cysteine--tRNA ligase [Escherichia coli 99.0839]
gi|444567061|gb|ELV43837.1| cysteine--tRNA ligase [Escherichia coli 99.0816]
gi|444571215|gb|ELV47705.1| cysteine--tRNA ligase [Escherichia coli 99.0848]
gi|444585099|gb|ELV60684.1| cysteine--tRNA ligase [Escherichia coli 99.1775]
gi|444586042|gb|ELV61570.1| cysteine--tRNA ligase [Escherichia coli 99.1793]
gi|444599674|gb|ELV74539.1| cysteine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444600191|gb|ELV75035.1| cysteine--tRNA ligase [Escherichia coli PA11]
gi|444608265|gb|ELV82805.1| cysteine--tRNA ligase [Escherichia coli 99.1805]
gi|444614298|gb|ELV88527.1| cysteine--tRNA ligase [Escherichia coli PA13]
gi|444615064|gb|ELV89283.1| cysteine--tRNA ligase [Escherichia coli PA19]
gi|444623354|gb|ELV97283.1| cysteine--tRNA ligase [Escherichia coli PA2]
gi|444632495|gb|ELW06063.1| cysteine--tRNA ligase [Escherichia coli PA48]
gi|444632775|gb|ELW06329.1| cysteine--tRNA ligase [Escherichia coli PA47]
gi|444637518|gb|ELW10891.1| cysteine--tRNA ligase [Escherichia coli PA8]
gi|444647524|gb|ELW20489.1| cysteine--tRNA ligase [Escherichia coli 7.1982]
gi|444650033|gb|ELW22890.1| cysteine--tRNA ligase [Escherichia coli 99.1781]
gi|444653772|gb|ELW26479.1| cysteine--tRNA ligase [Escherichia coli 99.1762]
gi|444662515|gb|ELW34768.1| cysteine--tRNA ligase [Escherichia coli PA35]
gi|444667131|gb|ELW39178.1| cysteine--tRNA ligase [Escherichia coli 3.4880]
gi|444672647|gb|ELW44344.1| cysteine--tRNA ligase [Escherichia coli 95.0083]
gi|444674421|gb|ELW45960.1| cysteine--tRNA ligase [Escherichia coli 99.0670]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K + MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|437834270|ref|ZP_20844942.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435301340|gb|ELO77373.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 461
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDIVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|392538778|ref|ZP_10285915.1| cysteinyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/480 (45%), Positives = 304/480 (63%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR Y++
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N ESI LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMGEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IEMVERLIAKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS NF T+RD+LK+Y+PE +R+F++
Sbjct: 235 HENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++D+ I + ++ NE +F AM+DDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECE--LESNE-FVIKFRKAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLK-----NNI 411
TP A+ +LF+LA +N+ K + ++A LR +G LG+ + + + FL+ N +
Sbjct: 352 TPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQGGQDDNEV 411
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T I+ I R+EAR K++ AD+ R L G+ILED GKT WR+
Sbjct: 412 AT------------IEALIVKRNEARASKDWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/475 (45%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P ++ +YVCG+T YD CH GH R + FD++ R+LR + Y+V
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYNV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N E+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENKETCDQLVDRMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +G DV + V +F YG LS + L E + KK+
Sbjct: 122 IAMVEKLIANGHAYVAEDG----DVMFDVESFKQYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YS L+ A+ +L RLY +++ + + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLDYSVENLDLARSALERLYTSLR---GCDVSGVAEGGEHYVEAFKTAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K MAK +L+ L LGLLE + FL+ + ++
Sbjct: 352 TPGALAVLFEIARELNKLKIEDMAKANGLAVRLKELAGVLGLLEQEPESFLQGDTNSDEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 412 A-------EIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPNG-TIWRK 458
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEGMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLNNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
Length = 464
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/476 (48%), Positives = 298/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ YDVT V
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFNYRGYDVTLV 68
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 69 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 128
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 129 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P WNS WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 182 -PMDFVLWKMAKEGEP---AWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 238 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 298 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 356
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K +
Sbjct: 357 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFK------Q 410
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ SE I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 411 GDGVDASE--IEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 463
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/479 (45%), Positives = 299/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR + Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT++IP+I
Sbjct: 62 HYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+EKLI NG AY +GDV + V +F YG LS N +++ E +
Sbjct: 122 IAMVEKLIANGHAYV----AADGDVMFDVESFPKYGALS----RQNLDQLQAGARVEIKS 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 VKKNPMDFVLWKMSKENEP---SWESPWGKGRPGWHIECSAMNSKELGEHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R
Sbjct: 231 MFPHHENEIAQSCCAHHGDYVNYWLHTGMLTIDREKMSKSLGNFFSIRYMLDLYDAESLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F L +HYRS ++YS LN A+ +L RLY A++ K E + + F IAM+
Sbjct: 291 YFFLTAHYRSLLDYSIDNLNLARSALERLYTALRGCDLTVPAKG---GEQYVEAFKIAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+++LF++A +NK K+ +A L+ L LGLLE + FLK
Sbjct: 348 DDFNTPGALAVLFEIAREVNKLKTEDAETANGLAVCLKELAGVLGLLEQDPETFLKGGAN 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 DDEAA-------EIEALIKQRNEAKAAKNWAIADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella novicida FTE]
gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
FTE]
Length = 464
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/476 (47%), Positives = 298/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 68
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 69 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 128
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 129 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 182 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 238 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 298 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 356
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K
Sbjct: 357 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG----- 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V+ SE I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 412 -DGVDASE--IEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 463
>gi|418464825|ref|ZP_13035764.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756780|gb|EHK90937.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 303/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+++N+ +R+K+IF PI GK+ +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N E+ L R + +D L+I PD++P AT++IP+I
Sbjct: 62 TYVRNITDVDDKIIKRALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AY +NG DV + V +F YGKLS + L E N KK+
Sbjct: 122 IDIVQKLIQRGHAYVADNG----DVMFDVESFKGYGKLSRQDLEQLQAGARIEINEIKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +++VNYW+HSG + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLSHYDAESVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYSE LN A +L RLY A++ K + E F AM+DDFN
Sbjct: 295 TAHYRSQLNYSEENLNLAHGALERLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+S LF++A +NK K+ MAK +LR L LGLL+ ++FL+ +
Sbjct: 352 TPNALSALFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD R L GI+LED PNG T WR+
Sbjct: 412 AK-------IEALIKQRNEARAAKDWAAADAARNALTEMGIVLEDGPNGTT-WRK 458
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/480 (45%), Positives = 304/480 (63%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR Y++
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N ESI LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENKESINDLTLRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IEMVERLIAKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS NF T+RD+LK+Y+PE +R+F++
Sbjct: 235 HENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLKEYDPESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++D+ I + ++ NE +F AM+DDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECE--LESNE-FVIKFRKAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLK-----NNI 411
TP A+ +LF+LA +N+ K + ++A LR +G LG+ + + + FL+ N +
Sbjct: 352 TPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQGGQDDNEV 411
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
T I+ I R++AR KN+ AD+ R L G+ILED GKT WR+
Sbjct: 412 AT------------IEALIVKRNDARASKNWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|417253478|ref|ZP_12045237.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
gi|386217409|gb|EII33898.1| cysteine--tRNA ligase [Escherichia coli 4.0967]
Length = 461
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIVEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|339494031|ref|YP_004714324.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338801403|gb|AEJ05235.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 462
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/477 (46%), Positives = 290/477 (60%), Gaps = 25/477 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
M L IYN+ S+ K+ F P+ KV +YVCG+T YD+CH+GHAR+M+ FD+V RWLR
Sbjct: 1 MMALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVTYVRNITDIDDKII A +N E + L R I A ED L++ PD +P AT++I
Sbjct: 61 YDVTYVRNITDIDDKIIRRASENGEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNF 179
+ MI+ LI G AY NG DV Y V F YGKLS R I E +
Sbjct: 121 AGMHTMIQTLIDKGFAYAPGNG----DVYYRVGKFAGYGKLSRRKIEDLKIGARIEVDEA 176
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDF LWK +K +P W+S WG GRPGWHIECS MS LG FDIHGGG DL
Sbjct: 177 KEDPLDFVLWKGAKPGEP---SWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 233
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A + N WMH+G V+++ +KMSKS GNF TIR++L+KY+PEV+R+
Sbjct: 234 FPHHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRY 293
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
++ SHYRS INYSE L AK +L R Y +K +P+ + RF AM+D
Sbjct: 294 LLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAG----GDEFVARFAAAMDD 349
Query: 360 DFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT 413
DFN+P ++LF++ +N+ + +A +L+ L LG+L+ FL+
Sbjct: 350 DFNSPEGCAVLFEMIREVNRLRESDLTAAAALAARLKELAGVLGVLQLEPGAFLQAGA-- 407
Query: 414 ERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
V+ +E ++ I R AR KN+ E+D+IR +L G++LED G T WR
Sbjct: 408 --AGKVDAAE--VEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGKGGTT-WR 459
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/479 (45%), Positives = 299/479 (62%), Gaps = 32/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS SR KQ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+ RNITD+DDKII A +NNES ++LT R I +D L+++ PD++P AT +I +I
Sbjct: 62 NFQRNITDVDDKIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+++L+ AY +NG DV +SV +F YG+LSG+ N +++ E +N
Sbjct: 122 IDMVQRLLDRDHAYVASNG----DVLFSVASFPEYGQLSGQ----NLDQLQAGARVEIDN 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 AKRNPMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQS A+ +VNYWMH+G V ++ +KMSKS NF TIRD+LK Y+ E +R
Sbjct: 231 QFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F+L HYRS +NYSE L A+ +L RLY A+K ++ E +F AM+
Sbjct: 291 YFLLSGHYRSQLNYSEDNLKQARAALERLYTALK---GLDLTVDAAPAEAFVAKFKSAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LF++ IN+ K+ MA+ L+ L + LGL+ + + F K
Sbjct: 348 DDFNTPEAYSVLFEMVREINRLKTTDMAEASALGVSLKQLADVLGLISQTPEAFFKG--- 404
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R+ AR K++ AD R L G+ LED T WR+
Sbjct: 405 ----EGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELEDGGPSGTTWRK 459
>gi|254469086|ref|ZP_05082492.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
gi|207087896|gb|EDZ65179.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
Length = 453
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/471 (46%), Positives = 309/471 (65%), Gaps = 25/471 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++I+N+F+ KK+ F PIT V +YVCG+T YD CH+GHAR++IVFD++ RW + YDV
Sbjct: 2 IKIFNTFTSKKEKFKPITENHVKMYVCGMTVYDDCHVGHARVLIVFDLIYRWFLNSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII + + LT R+I + EDS L + PP +QP AT IP +
Sbjct: 62 QYVRNITDIDDKIINKSNDQDCKFNELTDRYIDSMHEDSKALSVIPPTFQPKATEAIPSM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+KMI L+ G AY GK NGDV + + F +YGKLS + L + + KI++
Sbjct: 122 IKMISILVDKGFAYI---GK-NGDVFFEIAKFKDYGKLSKKNVDDLDAGSRVKIDDN--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
KK DF LWK+SK N+P W S WG GRPGWHIECSAMS +LG FDIHGGGQDL
Sbjct: 175 KKSFGDFVLWKLSKENEP---SWQSPWGNGRPGWHIECSAMSSDILGESFDIHGGGQDLI 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE + HK NYW+H+GFV ++++KMSKS GNF T++++LKKY+ EV+RF
Sbjct: 232 FPHHENEIAQSESCHGHKMANYWIHNGFVNVDDEKMSKSLGNFFTLKNVLKKYSGEVVRF 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMND 359
F+ +SHYRS +NYS+ LN AK ++ ++Y+A++ P + +D ++ + A++D
Sbjct: 292 FVYKSHYRSPLNYSDQNLNDAKVAVEKIYIALR--PYKCIQVDLDWSKASLSKIKDALDD 349
Query: 360 DFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
DFN+P AISI+F L N +NK + +A ++ + LGL+ +EF K+
Sbjct: 350 DFNSPKAISIIFKLINQLNKGSNNDLANEIYSVLKALGLMAIPQEEFF--------TKSS 401
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
+ I+ I R++A+ +K++ +AD++R E+ + G++LED +G T WR
Sbjct: 402 KIDHDHIEKLIQQRAQAKLQKDYQKADELRNEIDSLGVVLEDTASG-TVWR 451
>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|386596602|ref|YP_006093002.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|387620285|ref|YP_006127912.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|388476629|ref|YP_488815.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
W3110]
gi|417290179|ref|ZP_12077462.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|417616919|ref|ZP_12267351.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|417946862|ref|ZP_12590070.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|417978453|ref|ZP_12619219.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|418959182|ref|ZP_13511081.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|419941304|ref|ZP_14457994.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|422769750|ref|ZP_16823441.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|423701304|ref|ZP_17675763.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|432562434|ref|ZP_19799061.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|432736050|ref|ZP_19970825.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|433046606|ref|ZP_20234034.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|442590918|ref|ZP_21009668.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450239841|ref|ZP_21899168.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|135097|sp|P21888.2|SYC_ECOLI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558631|sp|B1XGC4.1|SYC_ECODH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|259511830|sp|C4ZUX4.1|SYC_ECOBW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
Complex With Trnacys
gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|342361392|gb|EGU25531.1| cysteinyl-tRNA synthetase [Escherichia coli XH140A]
gi|344191882|gb|EGV45986.1| cysteinyl-tRNA synthetase [Escherichia coli XH001]
gi|345380793|gb|EGX12685.1| cysteinyl-tRNA synthetase [Escherichia coli G58-1]
gi|359331278|dbj|BAL37725.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MDS42]
gi|384377884|gb|EIE35776.1| cysteinyl-tRNA synthetase [Escherichia coli J53]
gi|385712658|gb|EIG49600.1| cysteinyl-tRNA synthetase [Escherichia coli H730]
gi|386256217|gb|EIJ05905.1| cysteine--tRNA ligase [Escherichia coli B41]
gi|388400992|gb|EIL61672.1| cysteinyl-tRNA synthetase [Escherichia coli 75]
gi|431099667|gb|ELE04687.1| cysteinyl-tRNA synthetase [Escherichia coli KTE51]
gi|431286646|gb|ELF77470.1| cysteinyl-tRNA synthetase [Escherichia coli KTE42]
gi|431572510|gb|ELI45342.1| cysteinyl-tRNA synthetase [Escherichia coli KTE120]
gi|441608739|emb|CCP95581.1| Cysteinyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324899|gb|EMD14820.1| cysteinyl-tRNA ligase [Escherichia coli S17]
gi|227964|prf||1714234A Cys-tRNA synthetase
Length = 461
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES + R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/484 (44%), Positives = 298/484 (61%), Gaps = 42/484 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L++YNS +++K+ F PI G+V LYVCG+T YD CH+GHAR + FD++ R+LR Y V
Sbjct: 2 LKLYNSLTQRKEEFKPIQAGEVKLYVCGVTIYDLCHIGHARTYVAFDVIVRYLRYLGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRN+TD+DDKII A +NNESI ++T RF+ +D L++ PD +P T ++ +I
Sbjct: 62 TFVRNVTDVDDKIIRRAAENNESIDSITERFLGYMHDDFRALNLVEPDIEPRVTTHMQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
+ ++ +L+ AY ++G DV + V +F YG+LSG+ N ++
Sbjct: 122 IDLVAQLVEKKHAYVASSG----DVLFDVSSFPEYGRLSGQ----NLEQLQAGARVAVTE 173
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+D +DF LWK +K ++P W S WGAGRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 GKQDQMDFVLWKRAKADEP---SWESPWGAGRPGWHIECSAMNGKHLGKHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYWMH+G V++N +KMSKS GNF TIRD+L Y E +R
Sbjct: 231 MFPHHENEIAQSCCAHDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTIRDVLASYAAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
FF+L HYRS +NYSE +L+ A SL R+Y A++ I + E + R A+N
Sbjct: 291 FFLLSGHYRSQLNYSEAHLDQAHASLERIYTAMRGINAETASASV--RESYEARIREALN 348
Query: 359 DDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFN P A+S++F++ +N+ +S ++ L+ G LG+L+ DEFLK
Sbjct: 349 DDFNVPEAMSVIFEITREVNRQRSENKSLAAELVFLLQEYGAILGILQQQPDEFLKG--- 405
Query: 413 TERKKNVNYSEND-----IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
SE+D I+ I R+ AR+ K++ AD R EL GI+LED G T
Sbjct: 406 ---------SEDDSEVAKIEALIEQRNSAREAKDWAGADAARDELQALGIVLEDTAEG-T 455
Query: 468 EWRR 471
WRR
Sbjct: 456 LWRR 459
>gi|432945216|ref|ZP_20141490.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|433042019|ref|ZP_20229550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
gi|431462670|gb|ELH42878.1| cysteinyl-tRNA synthetase [Escherichia coli KTE196]
gi|431559940|gb|ELI33471.1| cysteinyl-tRNA synthetase [Escherichia coli KTE117]
Length = 461
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|375000267|ref|ZP_09724607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353074955|gb|EHB40715.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 461
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 292/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IDLTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|146310641|ref|YP_001175715.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
gi|145317517|gb|ABP59664.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
Length = 465
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 6 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 65
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 66 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 125
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ EKLI G AY +NG DV +SV YG+LS + L + + K++
Sbjct: 126 IEITEKLIERGHAYVASNG----DVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVDVKRN 181
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 182 PMDFVLWKTSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 238
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS NF T+RD+LK Y+ E +R+F++
Sbjct: 239 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLKYYDAETVRYFLM 298
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY+A++ K E RFI MNDDFN
Sbjct: 299 SGHYRSQLNYSEENLKQARSALERLYIAVRGTDK---SVAPAGGEAFEARFIDVMNDDFN 355
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K + +A LR L LGLLE + FL++
Sbjct: 356 TPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQSG-----A 410
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+N I+ I R EAR+ K++ AD R L GI+LED P G T WRR
Sbjct: 411 QNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLEDGPQG-TIWRR 464
>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|419937015|ref|ZP_14453934.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|432352190|ref|ZP_19595498.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|432400638|ref|ZP_19643398.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|432429676|ref|ZP_19672135.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|432459496|ref|ZP_19701660.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|432474545|ref|ZP_19716558.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|432521162|ref|ZP_19758327.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|432541381|ref|ZP_19778255.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|432630097|ref|ZP_19866047.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|432639646|ref|ZP_19875491.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|432664713|ref|ZP_19900309.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|432791775|ref|ZP_20025869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|432797742|ref|ZP_20031770.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|432884493|ref|ZP_20099449.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|432910211|ref|ZP_20117338.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|433017483|ref|ZP_20205753.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|433051826|ref|ZP_20239063.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|433066735|ref|ZP_20253578.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|433157470|ref|ZP_20342345.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|433176977|ref|ZP_20361441.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
gi|226735058|sp|B7N980.1|SYC_ECOLU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|388398419|gb|EIL59325.1| cysteinyl-tRNA synthetase [Escherichia coli 576-1]
gi|430880589|gb|ELC03874.1| cysteinyl-tRNA synthetase [Escherichia coli KTE2]
gi|430929358|gb|ELC49869.1| cysteinyl-tRNA synthetase [Escherichia coli KTE26]
gi|430947342|gb|ELC67043.1| cysteinyl-tRNA synthetase [Escherichia coli KTE181]
gi|430992580|gb|ELD08951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE204]
gi|431010485|gb|ELD24833.1| cysteinyl-tRNA synthetase [Escherichia coli KTE208]
gi|431045716|gb|ELD55946.1| cysteinyl-tRNA synthetase [Escherichia coli KTE228]
gi|431064099|gb|ELD73297.1| cysteinyl-tRNA synthetase [Escherichia coli KTE235]
gi|431174616|gb|ELE74661.1| cysteinyl-tRNA synthetase [Escherichia coli KTE80]
gi|431185221|gb|ELE84951.1| cysteinyl-tRNA synthetase [Escherichia coli KTE83]
gi|431204781|gb|ELF03339.1| cysteinyl-tRNA synthetase [Escherichia coli KTE116]
gi|431342571|gb|ELG29550.1| cysteinyl-tRNA synthetase [Escherichia coli KTE78]
gi|431345962|gb|ELG32876.1| cysteinyl-tRNA synthetase [Escherichia coli KTE79]
gi|431420081|gb|ELH02415.1| cysteinyl-tRNA synthetase [Escherichia coli KTE158]
gi|431447286|gb|ELH28028.1| cysteinyl-tRNA synthetase [Escherichia coli KTE190]
gi|431537058|gb|ELI13207.1| cysteinyl-tRNA synthetase [Escherichia coli KTE105]
gi|431575791|gb|ELI48517.1| cysteinyl-tRNA synthetase [Escherichia coli KTE122]
gi|431590975|gb|ELI61978.1| cysteinyl-tRNA synthetase [Escherichia coli KTE128]
gi|431681896|gb|ELJ47668.1| cysteinyl-tRNA synthetase [Escherichia coli KTE177]
gi|431710199|gb|ELJ74628.1| cysteinyl-tRNA synthetase [Escherichia coli KTE82]
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L + LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSSVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|410472139|ref|YP_006895420.1| cysteinyl-tRNA synthetase [Bordetella parapertussis Bpp5]
gi|408442249|emb|CCJ48771.1| cysteinyl-tRNA synthetase [Bordetella parapertussis Bpp5]
Length = 485
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 302/491 (61%), Gaps = 31/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L LAY+ +G DVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKSLAYRAEDG----DVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + +D +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADG--QGVDWS 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPPAY 413
Query: 407 LKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ Y+ + I+ +I R+ A+ ++F AD IR EL GI L+
Sbjct: 414 FQSPTRYSAAARGQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGIELD 473
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 474 DKPGGLTQWRR 484
>gi|187631664|sp|A4W7I4.2|SYC_ENT38 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGYTL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ EKLI G AY +NG DV +SV YG+LS + L + + K++
Sbjct: 122 IEITEKLIERGHAYVASNG----DVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS NF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHGGEYVNYWMHSGMVMVDREKMSKSLDNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY+A++ K E RFI MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYIAVRGTDK---SVAPAGGEAFEARFIDVMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A IN+ K + +A LR L LGLLE + FL++
Sbjct: 352 TPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQSG-----A 406
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+N I+ I R EAR+ K++ AD R L GI+LED P G T WRR
Sbjct: 407 QNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLEDGPQG-TIWRR 460
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 297/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLNNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVCLKELAAVLGLLYQDPEAFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|416552292|ref|ZP_11757008.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363564518|gb|EHL48565.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IDLTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K ++ E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEVFE---ARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|422939228|ref|YP_007012375.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|407294379|gb|AFT93285.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
Length = 459
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 297/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG----- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ SE I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 407 -DGADASE--IEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 458
>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
gi|123344273|sp|Q0TKB5.1|SYC_ECOL5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 296/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGLYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|420370198|ref|ZP_14870814.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391320627|gb|EIQ77459.1| cysteinyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 461
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDLEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANAMAAHLRKLSGVLGLLEQEPETFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/474 (46%), Positives = 294/474 (62%), Gaps = 25/474 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y+V
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDI+DKII A +N E+ LT R I D L+I PD +P AT+YI I
Sbjct: 62 NYVRNITDIEDKIIRRAAENGETFHQLTERMISEMHSDFDQLNILRPDQEPRATHYIDAI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++ +LI AY NGDV ++V + +YG LS + L E + K++
Sbjct: 122 IELVGQLIDRDHAYV----AANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMH+G V ++ +KMSKS GNF T+RD+L+ Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVLRYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY+A++ + + + +FI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYIALR---GTDATAVPAGGDHFVAQFIAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK-----MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
TP A S+LFD+A +N+ KS + MA LR L LGLLE FL+ +
Sbjct: 352 TPKAYSVLFDIAREVNRLKSEQPAAQGMAATLRQLAGVLGLLEQEPAAFLQQGAAED--- 408
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
NV I+ I R++ARK + + AD+ R +L GI+LED P G T WRR
Sbjct: 409 NVM-----IEALIQQRNDARKARQWALADEARDKLTALGIVLEDGPQGTT-WRR 456
>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W+S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
Length = 506
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 300/475 (63%), Gaps = 19/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+IF PI GK+ +YVCGIT YD CH+GH R + FD++ R+LR +YD+
Sbjct: 43 LKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVRYLRYLDYDL 102
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +NNE+ + LT R + D L+I P+ +P AT +I +I
Sbjct: 103 TYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNILRPNEEPQATAHITEI 162
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +I+KLI AY +GDV ++V++ NYG LS + L + + K+D
Sbjct: 163 IALIKKLIEGKHAYI----AADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIADGKED 218
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK + DP W+S WGAGRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 219 PMDFVLWKRALPGDP---SWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLFPH 275
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMH+G V + KMSKS NF TIRDLL Y+ E +R+F++
Sbjct: 276 HENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDAETVRYFLM 335
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YSE L ++ +L RLY+A++ + E KRF AM+DDFN
Sbjct: 336 SAHYRSQLDYSEENLRQSRIALERLYIALRGTDET--ASAAAAGENFEKRFRDAMDDDFN 393
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A ++LFD+A +N+ K+ +A LR + LGLL + FL+ ++E
Sbjct: 394 TPEACAVLFDIAREVNRLKTEDNAAASGLAATLRSMAQVLGLLTQKPEHFLQAVNHSEIA 453
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++ I+ I R+ AR++KN++ AD+ R +L I LED P G T WRR
Sbjct: 454 KDTEIAK--IEALIEQRNTARQQKNWVLADEARHQLNEMKITLEDGPQGTT-WRR 505
>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES + R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ ++ RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAAVERLYTALRGTDKTVAPA---GGEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|416269156|ref|ZP_11642364.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|416295501|ref|ZP_11651200.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417680511|ref|ZP_12329896.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420324132|ref|ZP_14825918.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|420334694|ref|ZP_14836316.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|420351298|ref|ZP_14852496.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421681218|ref|ZP_16121048.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|229558790|sp|B2TTB3.1|SYC_SHIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391257022|gb|EIQ16144.1| cysteinyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391268385|gb|EIQ27313.1| cysteinyl-tRNA synthetase [Shigella flexneri K-315]
gi|391288622|gb|EIQ47122.1| cysteinyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404341966|gb|EJZ68368.1| cysteinyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 296/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L + +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|416510386|ref|ZP_11736984.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416520758|ref|ZP_11740383.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416557371|ref|ZP_11759500.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363549055|gb|EHL33412.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363554086|gb|EHL38325.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363578885|gb|EHL62687.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDID+KII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDEKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 294/475 (61%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDALVERMIAEMHKDFDDLNILRPDVEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI G AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 IAMVEKLIAKGHAYV----AADGDVMFDVESFSQYGALSRQNLAQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWESPWGNGRPGWHIECSAMNSQELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGGEYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGLYDAESLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS ++YS L+ A+ +L RLY A++ + E + F AMNDDFN
Sbjct: 295 TAHYRSLLDYSVDNLDLARSALERLYTALR---GCDLTVAPAGGEQYISAFETAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ +A +L+ L LGLLE + FLK +
Sbjct: 352 TPGALAVLFEIAREVNKLKAEDPAQANGLAVRLKALAGVLGLLEQDPESFLKGESNADEA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 412 A-------EIEALIAKRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|423119049|ref|ZP_17106733.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376399695|gb|EHT12309.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 461
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 298/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHNDFDALNILRPDMEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +SV NYG+LS + L + + K++
Sbjct: 122 IEITEQLIARGHAYVADNG----DVMFSVPTDPNYGQLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGNGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K D E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEPAGGDAFE---ARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A +R L LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDVAAANAMAAHMRKLSGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIERLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
OSU18]
gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
GA99-3549]
gi|421751146|ref|ZP_16188203.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|421753001|ref|ZP_16190009.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|421756735|ref|ZP_16193634.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|421758602|ref|ZP_16195446.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|423051325|ref|YP_007009759.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
gi|424673870|ref|ZP_18110799.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|109894902|sp|Q2A1T7.1|SYC_FRATH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122324692|sp|Q0BKI3.1|SYC_FRATO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629822|sp|A7NE53.1|SYC_FRATF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629824|sp|A4IWF2.1|SYC_FRATW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
OSU18]
gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|409088688|gb|EKM88750.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|409088845|gb|EKM88903.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|409092065|gb|EKM92047.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|409093282|gb|EKM93232.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|417435524|gb|EKT90418.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|421952047|gb|AFX71296.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
Length = 464
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 297/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 68
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 69 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 128
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 129 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 182 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 238 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 298 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 356
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+
Sbjct: 357 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF-------- 408
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 409 KQGDGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 463
>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
Length = 464
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/479 (44%), Positives = 307/479 (64%), Gaps = 28/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ + LT R I +D +++ PD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTRALTERTIAMMHDDFAAINLLEPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI G AYQ +G DV + V ++ +YGKLS + L N + ++ K D
Sbjct: 122 IAIIERLIQRGHAYQAKSG----DVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDSDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK K P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTVK---PGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+LK+++ E +R+F++
Sbjct: 235 HENEVAQSCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLKQHDAETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
+HYRS ++YSE + A+ +L RLY A++D +N +D+ + RF AM+DDF
Sbjct: 295 SAHYRSQLSYSEDNITQARSALERLYTALRD---VNANIQVDMQSGDYLARFDKAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRG---------LGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LFD+A +NK K+ + + R LG LG+L+ S E+L+ +
Sbjct: 352 NTPEAMAVLFDVAKELNKAKAEEQSGHSRASDLAGILLNLGKVLGILQRSPSEYLQGD-- 409
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ +E I+ I R++AR K++ AD R L IILED P+G T WR+
Sbjct: 410 --QQDADEVAE--IEALIKARNDARAAKDWPAADAARDGLNVLNIILEDGPSGTT-WRK 463
>gi|82775639|ref|YP_401986.1| cysteinyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|109894938|sp|Q32JL0.1|SYC_SHIDS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81239787|gb|ABB60497.1| cysteine tRNA synthetase [Shigella dysenteriae Sd197]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/479 (46%), Positives = 296/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFNALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-----LISSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + L + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVVDNG----DVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----TMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|419173997|ref|ZP_13717852.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
gi|378037315|gb|EHV99843.1| cysteinyl-tRNA synthetase [Escherichia coli DEC7B]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 297/479 (62%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGENFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|378956076|ref|YP_005213563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438120779|ref|ZP_20872025.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|357206687|gb|AET54733.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434943402|gb|ELL49529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K S MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTASNAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|423138995|ref|ZP_17126633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379051549|gb|EHY69440.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 292/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHRDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IEITRILIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTT-WRR 460
>gi|385792247|ref|YP_005825223.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 296/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P WNS WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKKGEP---AWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI M++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKVMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF-------- 403
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 404 KQGDGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 458
>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 459
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/473 (46%), Positives = 297/473 (62%), Gaps = 25/473 (5%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKII A +N ESI LT R KA ED L++ PD +P T+++ +I+
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIA 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPL 184
M+++LI G AY +GDV + V F YG LS + L E K DPL
Sbjct: 124 MVKRLIEKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W+S WG GRPGWHIECS MS LG HFDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHHE 236
Query: 245 NEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRS 304
NEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK Y+ E +R+F++
Sbjct: 237 NEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISG 296
Query: 305 HYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTP 364
HYRS +NYS+ L+ A+ SL R+Y A++D+ + ++ NE AK F AMNDDFNTP
Sbjct: 297 HYRSQLNYSQENLDQARSSLERIYTALRDVVPVECD--LEGNEFVAK-FRKAMNDDFNTP 353
Query: 365 VAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
A+ +LF+LA +N+ ++ K+A LR LG LG+ + + + FL+ +
Sbjct: 354 EALPVLFELAKELNRVKESDAGQAGKLAFILRSLGEVLGVAQQAPEAFLQGGQDDDEVAT 413
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R+EAR K++ AD+ R L G+ILED GKT WR+
Sbjct: 414 -------IEALIVKRNEARASKDWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/498 (42%), Positives = 301/498 (60%), Gaps = 42/498 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+++YN+ SR+K+ F P+ PG V +Y CG+T YD CH+GHAR +VFD++ R+LR V
Sbjct: 1 MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLGNKV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
++VRN TDIDDKII A++ + S KT+ +I + Q D L + P D +P AT++I +I
Sbjct: 61 SWVRNFTDIDDKIIQRAEREHTSWKTVAETYIASFQRDMAALGVAPADIEPKATDHIDEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKKD- 182
+ I+ L GLAYQ N GDV + V F YGKLSGR + N +KD
Sbjct: 121 IGFIQVLEDQGLAYQRN-----GDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQKDN 175
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P DFALWK SK +P W+S WG GRPGWHIECSAMS + LG FDIHGGG DL FPH
Sbjct: 176 PFDFALWKASKPGEPA---WDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPH 232
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A+ YW+H+G V +N +KMSKS GNF TIR++L K++PEV+RFF++
Sbjct: 233 HENEIAQSEAAHGKPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLAKFHPEVVRFFLI 292
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-----PKINYKKI--------IDLNEPH 349
++HYRS +++S+ L A+ +L RLY + + P + I +D E
Sbjct: 293 QNHYRSPLDFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLSGLDSEEQS 352
Query: 350 -----AKRFIIAMNDDFNTPVAISILFDLANIINK------NKSIKMA------KQLRGL 392
RF+ AM+DDFNT A+ +LFD ++N+ + + M+ ++L L
Sbjct: 353 RLLTIRSRFLEAMDDDFNTAQALGVLFDAVRLLNRIVEHNPSGNADMSALAWTRRELTVL 412
Query: 393 GNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQEL 452
G L LL+ L+N ++ + ++I+ I R+EARK+++F +AD IRQ+L
Sbjct: 413 GGILNLLQQDPQTMLQN--LRQKTDALTIPPSEIERLIAARAEARKQRDFTKADAIRQQL 470
Query: 453 VNNGIILEDMPNGKTEWR 470
G++LED P G WR
Sbjct: 471 AEAGVLLEDTPQGAV-WR 487
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/473 (46%), Positives = 299/473 (63%), Gaps = 25/473 (5%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+ Y
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDLKY 63
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRNITDIDDKII A +N ESI LT R KA ED L++ PD +P T+++ +I+
Sbjct: 64 VRNITDIDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTSHMDEIIV 123
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPL 184
M+++LI G AY +GDV + V F YG LS + L E K DPL
Sbjct: 124 MVKRLIEKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPHHE
Sbjct: 180 DFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHHE 236
Query: 245 NEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRS 304
NEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK Y+ E +R+F++
Sbjct: 237 NEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKAYDAESVRYFLISG 296
Query: 305 HYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTP 364
HYRS +NYS+ L+ A+ SL R+Y A++D+ + ++ NE AK F AM+DDFNTP
Sbjct: 297 HYRSQLNYSQENLDQARSSLERIYTALRDVEPVECD--LEGNEFVAK-FRKAMDDDFNTP 353
Query: 365 VAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKN 418
A+ +LF+LA +N+ K + ++A LR +GN LG+ + + + FL+
Sbjct: 354 EALPVLFELAKELNRVKESDVVQAGQLAFILRSIGNVLGVAQQAPEAFLQGG-------Q 406
Query: 419 VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R+EAR K++ AD+ R L G+ILED GKT WR+
Sbjct: 407 DDGEVATIEALIVKRNEARTSKDWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|408414906|ref|YP_006625613.1| cysteinyl-tRNA synthetase [Bordetella pertussis 18323]
gi|401777076|emb|CCJ62332.1| cysteinyl-tRNA synthetase [Bordetella pertussis 18323]
Length = 486
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 302/491 (61%), Gaps = 30/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L GLAY+ +GDVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKGLAYRAE----DGDVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + + +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNT-AADGQGVDWSE 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+ +
Sbjct: 355 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPPAY 414
Query: 407 LKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ Y+ + I+ +I R+ A+ ++F AD IR EL GI L+
Sbjct: 415 FQSPTRYSAAARGQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGIELD 474
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 475 DKPGGLTQWRR 485
>gi|375122626|ref|ZP_09767790.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 461
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E++R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAEIVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|416573459|ref|ZP_11767805.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363571726|gb|EHL55630.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
Length = 461
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IDLTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ + +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDR 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|387823873|ref|YP_005823344.1| cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/476 (47%), Positives = 298/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPKATETIPEMIAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIEKGYAYQG----ANGDVFYRVSKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PIDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ +L+ ++DI + D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVEKLFNTLRDIEPVEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG----- 406
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V+ E I+ I R++A+K KN+L AD+IR +L GIILED G T W++
Sbjct: 407 -DSVDVGE--IERLIVERTQAKKDKNYLRADEIRNQLQEQGIILEDSATGTT-WKK 458
>gi|419762171|ref|ZP_14288420.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397745089|gb|EJK92298.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 478
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/479 (47%), Positives = 299/479 (62%), Gaps = 27/479 (5%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y
Sbjct: 17 SMLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY 76
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
+ YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I
Sbjct: 77 KLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIA 136
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+++ E+LI G AY +NG DV + V NYG LS + L + + K
Sbjct: 137 EIIEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVK 192
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL F
Sbjct: 193 RNPMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 249
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F
Sbjct: 250 PHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYF 309
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMN 358
++ HYRS +NYSE L A+ +L RLY A++ K +D E RFI AM+
Sbjct: 310 LMSGHYRSQLNYSEENLKQARSALERLYTALR-----GTDKSVDAAGGEAFEARFIEAMD 364
Query: 359 DDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 365 DDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQ 424
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 425 VD-----DAEVTEIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 477
>gi|423127880|ref|ZP_17115559.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376394919|gb|EHT07569.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 461
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 297/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAEPSG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDTAAANAMAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY + DV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHSGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + +E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLR---GCDLSVQVAGSEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNG-TMWRK 458
>gi|397656419|ref|YP_006497121.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|423101703|ref|ZP_17089405.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|376390529|gb|EHT03212.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|394345010|gb|AFN31131.1| Cysteinyl-tRNA synthetase [Klebsiella oxytoca E718]
Length = 461
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 297/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAEPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|410419428|ref|YP_006899877.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica MO149]
gi|408446723|emb|CCJ58393.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica MO149]
Length = 485
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 302/491 (61%), Gaps = 31/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +Q PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQRPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L GLAY+ +G DVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKGLAYRAEDG----DVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + +D +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADG--QGVDWS 353
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + A QL+ LG LGLL+ +
Sbjct: 354 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDPPAY 413
Query: 407 LKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ Y+ + I+ +I R+ A+ ++F AD IR EL GI L+
Sbjct: 414 FQSPTRYSAAARGQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGIELD 473
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 474 DRPGGLTQWRR 484
>gi|418511935|ref|ZP_13078183.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366084252|gb|EHN48163.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 461
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|374978567|ref|ZP_09719909.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375113462|ref|ZP_09758632.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444037|ref|YP_005231669.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448881|ref|YP_005236240.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378698497|ref|YP_005180454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378983142|ref|YP_005246297.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378987939|ref|YP_005251103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699758|ref|YP_005241486.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383495343|ref|YP_005396032.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|409248984|ref|YP_006884821.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|421357672|ref|ZP_15807980.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421365334|ref|ZP_15815556.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421368891|ref|ZP_15819075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372340|ref|ZP_15822489.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375950|ref|ZP_15826059.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380522|ref|ZP_15830584.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385971|ref|ZP_15835987.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421392385|ref|ZP_15842342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396099|ref|ZP_15846031.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398756|ref|ZP_15848661.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405061|ref|ZP_15854896.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407663|ref|ZP_15857470.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421412003|ref|ZP_15861766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419352|ref|ZP_15869044.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421423972|ref|ZP_15873623.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425728|ref|ZP_15875363.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430073|ref|ZP_15879667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436902|ref|ZP_15886428.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421439275|ref|ZP_15888766.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421445950|ref|ZP_15895371.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421451097|ref|ZP_15900463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421884239|ref|ZP_16315454.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422024672|ref|ZP_16371149.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422029698|ref|ZP_16375953.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427545987|ref|ZP_18926463.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427562223|ref|ZP_18931226.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427580807|ref|ZP_18936049.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427602934|ref|ZP_18940824.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427627657|ref|ZP_18945736.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427650961|ref|ZP_18950491.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427659909|ref|ZP_18955447.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427665020|ref|ZP_18960192.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427700860|ref|ZP_18965144.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436707351|ref|ZP_20518603.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436797095|ref|ZP_20523041.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436810693|ref|ZP_20529731.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436813561|ref|ZP_20531749.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436831285|ref|ZP_20535953.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849875|ref|ZP_20541012.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856288|ref|ZP_20545393.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863273|ref|ZP_20549816.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436871749|ref|ZP_20554923.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436878902|ref|ZP_20559321.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436887016|ref|ZP_20563422.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436894318|ref|ZP_20567796.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436904444|ref|ZP_20574461.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436910080|ref|ZP_20576665.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436918333|ref|ZP_20581504.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436925448|ref|ZP_20585880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436934372|ref|ZP_20590376.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436941200|ref|ZP_20594760.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436949190|ref|ZP_20599204.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436959759|ref|ZP_20603956.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436975025|ref|ZP_20611301.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436987284|ref|ZP_20615928.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436999822|ref|ZP_20620395.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437010139|ref|ZP_20624119.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437018063|ref|ZP_20626555.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437035651|ref|ZP_20633577.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437046499|ref|ZP_20638315.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049250|ref|ZP_20639870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437056937|ref|ZP_20644305.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437065389|ref|ZP_20649074.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437078832|ref|ZP_20656326.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437081856|ref|ZP_20657931.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437089880|ref|ZP_20662452.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437117255|ref|ZP_20669875.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122452|ref|ZP_20672294.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437132552|ref|ZP_20678002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437137659|ref|ZP_20680454.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148972|ref|ZP_20687845.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437152070|ref|ZP_20689741.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161017|ref|ZP_20695090.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172875|ref|ZP_20701398.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437175355|ref|ZP_20702818.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437188339|ref|ZP_20710343.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437201147|ref|ZP_20711796.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437259799|ref|ZP_20717319.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437272811|ref|ZP_20724561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437279181|ref|ZP_20727518.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437288448|ref|ZP_20730782.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437306917|ref|ZP_20734559.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437323656|ref|ZP_20739390.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437338327|ref|ZP_20743633.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437370524|ref|ZP_20749229.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437421767|ref|ZP_20755056.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437456365|ref|ZP_20760484.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437469912|ref|ZP_20764927.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437485370|ref|ZP_20769482.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437498954|ref|ZP_20773763.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437502455|ref|ZP_20774537.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437528684|ref|ZP_20780137.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437558041|ref|ZP_20785330.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569191|ref|ZP_20787817.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437593166|ref|ZP_20795332.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437602273|ref|ZP_20798280.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437625451|ref|ZP_20805536.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437638451|ref|ZP_20807509.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437658385|ref|ZP_20811592.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437670670|ref|ZP_20815680.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694697|ref|ZP_20821772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437718071|ref|ZP_20828471.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437723537|ref|ZP_20829366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437811699|ref|ZP_20841291.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437868275|ref|ZP_20848257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438091359|ref|ZP_20860870.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438105690|ref|ZP_20866308.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438114367|ref|ZP_20869983.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|440762064|ref|ZP_20941129.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440768809|ref|ZP_20947773.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772397|ref|ZP_20951302.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445136689|ref|ZP_21383553.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445172421|ref|ZP_21396512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445218538|ref|ZP_21402566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445230753|ref|ZP_21405529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445311497|ref|ZP_21411814.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445324771|ref|ZP_21412334.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445343434|ref|ZP_21416903.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445354512|ref|ZP_21421411.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|21264009|sp|Q8ZR68.1|SYC_SALTY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81309761|sp|Q57S29.1|SYC_SALCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710849|sp|B5EYD7.1|SYC_SALA4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710851|sp|B5R6X0.1|SYC_SALG2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558784|sp|B5QUV0.1|SYC_SALEP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781692|sp|C0PVI8.1|SYC_SALPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379985953|emb|CCF87727.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|380462164|gb|AFD57567.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|395980845|gb|EJH90068.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395983186|gb|EJH92379.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989909|gb|EJH99041.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395999990|gb|EJI09005.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396003177|gb|EJI12165.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396003571|gb|EJI12558.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007946|gb|EJI16881.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396011143|gb|EJI20054.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015454|gb|EJI24336.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396024372|gb|EJI33158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396029595|gb|EJI38331.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396030546|gb|EJI39280.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035492|gb|EJI44164.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396036020|gb|EJI44691.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396044251|gb|EJI52848.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396052222|gb|EJI60730.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396056999|gb|EJI65472.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396057390|gb|EJI65862.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396063852|gb|EJI72240.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396064385|gb|EJI72772.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396071481|gb|EJI79806.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|414023396|gb|EKT06830.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414023540|gb|EKT06968.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414025083|gb|EKT08423.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414037278|gb|EKT20062.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414038392|gb|EKT21103.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414042477|gb|EKT25015.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414051626|gb|EKT33715.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414053052|gb|EKT35070.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414057250|gb|EKT39009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414061693|gb|EKT43076.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414067187|gb|EKT47591.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434961167|gb|ELL54485.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434965185|gb|ELL58148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434975069|gb|ELL67379.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434982242|gb|ELL74065.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434988452|gb|ELL80051.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434991721|gb|ELL83209.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434992461|gb|ELL83914.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434997800|gb|ELL89039.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435000964|gb|ELL92086.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435007578|gb|ELL98431.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435011548|gb|ELM02268.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435016966|gb|ELM07474.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435018132|gb|ELM08607.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435028453|gb|ELM18532.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031065|gb|ELM21054.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435039841|gb|ELM29610.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435041512|gb|ELM31254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435045031|gb|ELM34676.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435049976|gb|ELM39481.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053888|gb|ELM43324.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435054424|gb|ELM43859.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435059865|gb|ELM49140.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435060363|gb|ELM49633.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435067039|gb|ELM56110.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435075018|gb|ELM63841.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435077969|gb|ELM66713.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435081655|gb|ELM70296.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435096455|gb|ELM84727.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435096788|gb|ELM85050.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435100037|gb|ELM88228.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435101188|gb|ELM89342.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111024|gb|ELM98929.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113627|gb|ELN01473.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435114898|gb|ELN02688.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122099|gb|ELN09621.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435123278|gb|ELN10771.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435130781|gb|ELN18009.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435134293|gb|ELN21421.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435143543|gb|ELN30409.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435143952|gb|ELN30806.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435146530|gb|ELN33323.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435156259|gb|ELN42761.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435157013|gb|ELN43480.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435165187|gb|ELN51247.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168143|gb|ELN53996.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435171337|gb|ELN56973.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435183848|gb|ELN68809.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435186905|gb|ELN71718.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435194707|gb|ELN79135.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435196324|gb|ELN80667.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435200583|gb|ELN84568.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206743|gb|ELN90245.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435207072|gb|ELN90564.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435214272|gb|ELN97095.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435214797|gb|ELN97545.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435216545|gb|ELN99020.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435223877|gb|ELO05861.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435237883|gb|ELO18538.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435240193|gb|ELO20613.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435246239|gb|ELO26257.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435250670|gb|ELO30390.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435252427|gb|ELO31977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435253270|gb|ELO32758.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435259961|gb|ELO39174.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435270384|gb|ELO48880.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278076|gb|ELO55951.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435278277|gb|ELO56148.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435280876|gb|ELO58561.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435283923|gb|ELO61437.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435293849|gb|ELO70512.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435298053|gb|ELO74310.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435315768|gb|ELO88988.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435321379|gb|ELO93794.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435328766|gb|ELP00224.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335378|gb|ELP05624.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436416249|gb|ELP14158.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436418881|gb|ELP16762.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436424013|gb|ELP21801.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|444845036|gb|ELX70258.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856300|gb|ELX81336.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444860528|gb|ELX85443.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444864127|gb|ELX88935.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444873428|gb|ELX97724.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|444881238|gb|ELY05282.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444882002|gb|ELY06002.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444887602|gb|ELY11295.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 461
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|423107105|ref|ZP_17094800.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|376389231|gb|EHT01923.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
Length = 461
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAAPA---GGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSAVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|379717862|ref|YP_005306198.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726465|ref|YP_005318651.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377827914|gb|AFB81162.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377829539|gb|AFB79618.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
Length = 459
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/476 (47%), Positives = 297/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ N DV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIKKGYAYQG----ANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF-------- 403
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++I+ I R++A+K KN++ AD+IR +L GIILED G T W++
Sbjct: 404 KQGDGADASEIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSATGTT-WKK 458
>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|254371268|ref|ZP_04987270.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|385795338|ref|YP_005831744.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|421756284|ref|ZP_16193204.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
gi|61216126|sp|Q5NEL1.1|SYC_FRATT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123063359|sp|Q14G14.1|SYC_FRAT1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|409085022|gb|EKM85176.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
Length = 464
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/476 (47%), Positives = 297/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 68
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 69 RNITDIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 128
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ N DV Y V F +YGKLS + + S + + EK N
Sbjct: 129 IETLIKKGYAYQG----ANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 182 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 238 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 298 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 356
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+ K
Sbjct: 357 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG----- 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ SE I+ I R++A+K KN++ AD+IR +L GIILED G T W++
Sbjct: 412 -DGADASE--IEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSATGTT-WKK 463
>gi|423112988|ref|ZP_17100679.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376389530|gb|EHT02220.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
Length = 461
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAAPA---GGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSAVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPRGTT-WRR 460
>gi|375259436|ref|YP_005018606.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|365908914|gb|AEX04367.1| cysteinyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
Length = 461
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKTAEPA---GGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVAA-----IESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|422013258|ref|ZP_16359886.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414103466|gb|EKT65041.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 462
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 295/475 (62%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI PGK+ +YVCGIT YD CH+GH R + FD + R+LR YD+
Sbjct: 2 LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +NNES+ LT+R + +D L+I P+ +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIKRAAENNESVDALTARMLAEMHKDFDALNILRPNSEPRATQHIIEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E LI G AY NG DV + V+ +YGKLS + L E + K++
Sbjct: 122 IEITELLINRGHAYVAENG----DVMFEVKTDEDYGKLSRQDLEQLQAGARVEVADVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L+ Y+ E +R+F+L
Sbjct: 235 HENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY A++ K E RF AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTALRGTDK---NVAPAGGEIFKARFEEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S LFD+ IN+ KS MA +LR L LGLLE + FL+ + E
Sbjct: 352 TPEAYSALFDMVREINRLKSEDMAAANAMASELRRLAGVLGLLEQDPEAFLQGSAQGEDD 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ V E IK R++ARK K + AD R EL + GI+LED G T WRR
Sbjct: 412 EEVAKIEALIKQ----RNDARKTKEWALADAARDELTSMGIVLEDGAQG-TIWRR 461
>gi|339998481|ref|YP_004729364.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339511842|emb|CCC29553.1| cysteinyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 461
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + + LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 INITQTLIEKGHAYVADNG----DVMFDVPTDPAYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPEAFLQSGAQADDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|442611662|ref|ZP_21026368.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747590|emb|CCQ12430.1| Cysteinyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 459
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 298/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ +R+K+ F P+TPGKV +YVCGIT YDYCH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIYNTLTRQKEEFKPLTPGKVDMYVCGITIYDYCHVGHARTYVSFDVMNRYLRHLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE+I LT R KA +D L++ P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRANENNEAINDLTVRMTKAMHDDFAALNMLPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E+LI G AY NG DV + V F +YGKLS + L E K+D
Sbjct: 122 IVMVERLIEKGHAYVAKNG----DVLFDVSTFTDYGKLSQQDLEMLQAGARVEVVQDKED 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAK---PSEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS GNF T+RD+LK+++ E +R+F++
Sbjct: 235 HENEIAQSCCANHGQYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLKEFDAETVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS L A+ ++ R+Y A++ + + + L+ + RF AMNDDFN
Sbjct: 295 NGHYRSQLNYSHENLEQARATVERIYTALRGVKPV---AVDLLSNDYVARFEAAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ ++F+LA +N+ K K+A L L LG+ + + F + ++
Sbjct: 352 TPEALPVIFELAKEVNRLKEAEPLEAGKLAYVLVQLAGVLGIAQRDPEAFFQGGQDSDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R AR+ K++ AD R L G++LED GKT WR+
Sbjct: 412 AK-------IEALIEQRKAARESKDWAAADAARDALTAMGVVLED-SAGKTTWRK 458
>gi|359437267|ref|ZP_09227337.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|359446712|ref|ZP_09236363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|392554148|ref|ZP_10301285.1| cysteinyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
gi|358028091|dbj|GAA63586.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358039518|dbj|GAA72612.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 459
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/475 (44%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+
Sbjct: 2 VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N E+I LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IAMVERLIAKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS NF T+R++LK+Y+ E +R+F++
Sbjct: 235 HENEIAQSCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++ + + + ++ NE + +F AMNDDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVECE--LEGNE-YVAKFRKAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
+P A+ ++F++A +N+ K+ +A LR LG LG+ + + + FL+ +
Sbjct: 352 SPEALPVVFEVAKELNRVKESDSEKAGHLAFVLRSLGEILGIAQQAPEAFLQGGQNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD+ R L G+ILED GKT WR+
Sbjct: 412 A-------EIEALIVKRNDARASKNWAAADEARDALNALGVILEDSA-GKTTWRK 458
>gi|416526740|ref|ZP_11742645.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536050|ref|ZP_11748117.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363557792|gb|EHL41997.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363565156|gb|EHL49192.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
Length = 461
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 292/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + LI G AY +NG DV + V YG+LS + L + + K++
Sbjct: 122 IDLTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K + MA LR + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDMAAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 412 EVA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 460
>gi|416224314|ref|ZP_11626455.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
gi|326562651|gb|EGE12953.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
Length = 483
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/454 (45%), Positives = 280/454 (61%), Gaps = 22/454 (4%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L++Y++ S K+ F PI G++ +YVCG+T YDYCH+GHAR+M+ FD++ RWLR Y
Sbjct: 9 SQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIGY 68
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
V YVRNITDIDDKII A N E+I LT RFI A +D L Q P+ +P AT +I
Sbjct: 69 QVNYVRNITDIDDKIIQRAYDNGETITELTDRFITAMHQDEQFLGCQSPNIEPRATEHIE 128
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKK 181
+ +I+ L+ LAYQ + G DV Y++ F NYGKLS R + +E+ + +
Sbjct: 129 NMQHLIDVLLTKNLAYQGSGG----DVYYAIEKFPNYGKLSKRHVDDMQAGASERVSTAE 184
Query: 182 D---PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
D P DF LWK +K ++P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 185 DKRHPFDFVLWKTAKPSEPH---WQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGHDL 241
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
+FPHHENEIAQSEGA + N+WMH GF+ I+ +KMSKS GNF TIR+++ K++PE IR
Sbjct: 242 QFPHHENEIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVDKFHPETIR 301
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIA 356
FF+L SHYRS +N+S+ L + +L R+Y ++K I+ + F A
Sbjct: 302 FFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWESEAGQAFAKA 361
Query: 357 MNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
MNDDFNTP A+S+LF + IN+ K+ + A L+ L + L + + S EFL+
Sbjct: 362 MNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIAQSSPHEFLQA 421
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFL 443
NI K S+ +I KI R +A+ K L
Sbjct: 422 NI---GNKPDGLSDAEIANKIAQRQQAKSSKKTL 452
>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 459
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII + +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEMHKDFDALNILRPDVEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKL+ G AY +G DV ++V +F YG LS + L E + K++
Sbjct: 122 IAIVEKLLAKGHAYVAEDG----DVMFNVESFQKYGALSRQNLEQLQAGARVEIKSVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILNKYDCESVRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS ++YSE + A+K+L RLY A++ ++ + N+ + F +M+DDFN
Sbjct: 295 TAQYRSLLDYSEENIGLARKALERLYTALR---GCDWNVELAENDQYVTAFKESMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF+LA INK K+ K+A +L+ L LGLLE + FL+ +
Sbjct: 352 TPGALAVLFELAREINKLKAENQVEANKLAARLKQLAGVLGLLEQDPETFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EAR KN+ AD+ R +L GI+LED NG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEARASKNWAVADEARNKLTAMGIVLEDGANGTT-WRK 458
>gi|433657370|ref|YP_007274749.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
gi|432508058|gb|AGB09575.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
Length = 436
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/452 (47%), Positives = 285/452 (63%), Gaps = 24/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GH R + FD+V R+LR YD+T+VRNITDIDDKII A +N ES
Sbjct: 1 MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDLTFVRNITDIDDKIIKRAAENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
++LT R I D L+++ PD +P AT +I +I++++EKLI G AY +NG
Sbjct: 61 CESLTERLIGDMHADFDALNMKRPDVEPRATQFIAEIIELVEKLIERGFAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + V F YGKLS + L + K+ PLDF LWK+SK P E W S
Sbjct: 117 DVMFEVGKFDEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSK---PGEPTWESP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+ +LG HFDIHGGG DL+FPHHENEIAQS A+ K+VN WMHS
Sbjct: 174 WGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFPHHENEIAQSCCAHDTKYVNTWMHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G V ++ +KMSKS GNF TIRD+L Y+ E +R+F++ HYRS +NYSE LN A+ SL
Sbjct: 234 GMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQARASLE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN--KNKSI 383
RLY +++ ++ E + RF AMNDDFNTP A S+LFD+A +N K +S+
Sbjct: 294 RLYTSLR---GLDLNAAPAGGEEYVSRFTAAMNDDFNTPEAYSVLFDMAREVNRLKTESV 350
Query: 384 KMAKQL----RGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
+ A +L R L + +G+L + FLK N + + +I+ I R+++R
Sbjct: 351 EKASELGALMRELADVIGILYQDPEAFLKGNAGNDDEVA------EIEALIKLRNDSRAS 404
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ AD R +L GI+LED P G T WRR
Sbjct: 405 KDWANADMARDKLTEMGIVLEDGPEGTT-WRR 435
>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|229558635|sp|B2SFH9.1|SYC_FRATM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/476 (47%), Positives = 298/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 63
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNIT+IDDKII A +N ES L R IKA + L+I P +P AT IP+++ M
Sbjct: 64 RNITNIDDKIIKRANENGESTTELVERNIKAMHDVFARLNILKPSKEPRATETIPEMVAM 123
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 124 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG+ FDIH GG DL+FP
Sbjct: 177 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGNTFDIHAGGSDLRFP 232
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 233 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 292
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I D +E + ++FI AM++DF
Sbjct: 293 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE-YEEKFIKAMDNDF 351
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+
Sbjct: 352 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF-------- 403
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 404 KQGDGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 458
>gi|440288665|ref|YP_007341430.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
gi|440048187|gb|AGB79245.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI
57]
Length = 463
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/476 (46%), Positives = 295/476 (61%), Gaps = 23/476 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD+CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDFCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVQLVDRMIVEMHKDFDALNILRPDAEPRATHHIHEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +G DV +SV NYGKLS + L E K++
Sbjct: 122 IEITERLIERGHAYVAESG----DVMFSVPTDPNYGKLSRQDLEQLQAGARVEVAEVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEP---SWPSPWGEGRPGWHIECSAMNCKQLGHHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + + + + + RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARSALERLYTALRGTTTTDLEFV--RSAQYVDRFKEAMDDDFN 352
Query: 363 TPVAISILFDLANIINKNKSI-------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
TPVA ++LFDLA +N K A LR L LGLLE + FL++ +
Sbjct: 353 TPVAYAVLFDLAKEVNNAKQAGNSEEANAAATCLRTLAAVLGLLEQDPEAFLQSGAQADD 412
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 413 GEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 462
>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|254781682|sp|B8F392.1|SYC_HAEPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 459
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII + +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEMHKDFDALNILRPDVEPRATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++EKL+ G AY +G DV ++V +F YG LS + L E + K++
Sbjct: 122 IAIVEKLLAKGHAYVAEDG----DVMFNVESFQKYGALSRQNLEQLQAGARVEIKSVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKENEP---SWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F L
Sbjct: 235 HENEIAQSCCAHGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILNKYDCESVRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS ++YSE + A+K+L RLY A++ ++ + N+ + F +M+DDFN
Sbjct: 295 TAQYRSLLDYSEENIGLARKALERLYTALR---GCDWNVELVENDQYVTAFKESMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF+LA +NK K+ K+A +L+ L LGLLE + FL+ +
Sbjct: 352 TPGALAVLFELAREVNKLKAENQAEANKLAARLKQLAGVLGLLEQDPETFLQGDAN---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EAR KN+ AD+ R +L GI+LED NG T WRR
Sbjct: 408 ---NDEVAEIEAFIKQRNEARASKNWAVADEARNKLTAMGIVLEDGANGTT-WRR 458
>gi|402841392|ref|ZP_10889843.1| cysteine--tRNA ligase [Klebsiella sp. OBRC7]
gi|402283213|gb|EJU31734.1| cysteine--tRNA ligase [Klebsiella sp. OBRC7]
Length = 461
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 299/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG+LS + L + + K +
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K N + E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDK-NAEPA--GGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|24111894|ref|NP_706404.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30062010|ref|NP_836181.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|415859298|ref|ZP_11533573.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|417731992|ref|ZP_12380663.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|417741957|ref|ZP_12390509.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
gi|61216306|sp|Q83M27.1|SYC_SHIFL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24050695|gb|AAN42111.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30040254|gb|AAP15987.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|313646855|gb|EFS11312.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|332761515|gb|EGJ91797.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|332768439|gb|EGJ98623.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
Length = 461
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/479 (46%), Positives = 296/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----RMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
Length = 464
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/476 (46%), Positives = 296/476 (62%), Gaps = 32/476 (6%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
YNS S +K+ F PI K+ +Y CG+T YD CH+GHAR I FD++ R+ + YDVT V
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYDVTLV 68
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R I+A + L+I P +P AT IP+++ M
Sbjct: 69 RNITDIDDKIIKRANENGESTTELVERNIRAMHDVFARLNILKPSKEPRATETIPEMVAM 128
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKK 181
IE LI G AYQ NGDV Y V F +YGKLS + + S + + EK N
Sbjct: 129 IETLIKKGYAYQG----ANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEKEN--- 181
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK++K +P W+S WGAGRPGWHIECSAMS LLG FDIH GG DL+FP
Sbjct: 182 -PMDFVLWKMAKEGEP---AWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFP 237
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + F NYW+HSG VK+N +KMSKS NF TI ++L++Y+PEV+R+F+
Sbjct: 238 HHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLEEYHPEVVRYFL 297
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ YRS INYS+ L AK S+ RL+ A++DI I + D + ++FI AM++DF
Sbjct: 298 ASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEV-NLPDNASEYEEKFIKAMDNDF 356
Query: 362 NTPVAISILFDLANII------NKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+++LF LA I NK K+ A LR L + LG+L +E+
Sbjct: 357 NTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF-------- 408
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K+ ++I+ I R++A+K KN+ AD+IR +L GIILED G T W++
Sbjct: 409 KQGDGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSATGTT-WKK 463
>gi|238893488|ref|YP_002918222.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402782012|ref|YP_006637558.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|238545804|dbj|BAH62155.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402542876|gb|AFQ67025.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 461
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 298/477 (62%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMNDD 360
HYRS +NYSE L A+ +L RLY A++ K +D E RFI AM+DD
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR-----GTDKSVDAAGGEAFEARFIEAMDDD 349
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++ +
Sbjct: 350 FNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQVD 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 410 DAEVA-----EIESLIQRRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|152969054|ref|YP_001334163.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206578467|ref|YP_002239997.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|262041635|ref|ZP_06014829.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288936751|ref|YP_003440810.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
gi|365138546|ref|ZP_09345230.1| cysteinyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|378977390|ref|YP_005225531.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419973228|ref|ZP_14488653.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978412|ref|ZP_14493708.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983798|ref|ZP_14498947.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989850|ref|ZP_14504824.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995729|ref|ZP_14510534.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420000640|ref|ZP_14515298.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007734|ref|ZP_14522227.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013201|ref|ZP_14527512.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018286|ref|ZP_14532483.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024379|ref|ZP_14538392.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030137|ref|ZP_14543964.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035243|ref|ZP_14548907.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420041573|ref|ZP_14555069.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420047634|ref|ZP_14560950.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053338|ref|ZP_14566516.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058181|ref|ZP_14571194.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420064468|ref|ZP_14577277.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070446|ref|ZP_14583098.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076023|ref|ZP_14588496.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420085684|ref|ZP_14597899.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421913625|ref|ZP_16343300.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915765|ref|ZP_16345359.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|425078005|ref|ZP_18481108.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425080240|ref|ZP_18483337.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425088638|ref|ZP_18491731.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425090362|ref|ZP_18493447.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428151347|ref|ZP_18999072.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428932885|ref|ZP_19006453.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428939917|ref|ZP_19013015.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|449049411|ref|ZP_21731438.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
gi|187629829|sp|A6T5R2.1|SYC_KLEP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226710845|sp|B5Y0K6.1|SYC_KLEP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150953903|gb|ABR75933.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206567525|gb|ACI09301.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|259041024|gb|EEW42101.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288891460|gb|ADC59778.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
gi|363655006|gb|EHL93879.1| cysteinyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|364516801|gb|AEW59929.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397348700|gb|EJJ41798.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397351483|gb|EJJ44566.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397354849|gb|EJJ47875.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366713|gb|EJJ59328.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397368371|gb|EJJ60977.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372855|gb|EJJ65327.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397380150|gb|EJJ72335.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397384435|gb|EJJ76555.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397390243|gb|EJJ82153.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398994|gb|EJJ90651.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397401958|gb|EJJ93570.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397407979|gb|EJJ99355.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397416474|gb|EJK07647.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397418110|gb|EJK09269.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424123|gb|EJK15030.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433174|gb|EJK23824.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397437222|gb|EJK27791.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397441828|gb|EJK32194.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447534|gb|EJK37724.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397448976|gb|EJK39131.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405590984|gb|EKB64497.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405601730|gb|EKB74883.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405607165|gb|EKB80135.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614046|gb|EKB86767.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410112430|emb|CCM85925.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121894|emb|CCM87984.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426303207|gb|EKV65385.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426306692|gb|EKV68791.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427538659|emb|CCM95210.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448876784|gb|EMB11763.1| cysteinyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
Length = 461
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 298/477 (62%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMNDD 360
HYRS +NYSE L A+ +L RLY A++ K +D E RFI AM+DD
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR-----GTDKSVDAAGGEAFEARFIEAMDDD 349
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++ +
Sbjct: 350 FNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQVD 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 410 DAEVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLNNLDLARSALERLYTSLR---GCDLSVEVAGGEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ MAK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDMAKANGLAARLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|418021756|ref|ZP_12660775.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
gi|347602886|gb|EGY27832.1| cysteinyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
Length = 497
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/480 (45%), Positives = 293/480 (61%), Gaps = 35/480 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+IF PI GK+ +YVCGIT YD CH+GH R + FD++ R+LR Y +
Sbjct: 37 LKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVRYLRYLGYHL 96
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITDIDDKII A +NNE+ + LT R + D L+I PD +P AT +I +I
Sbjct: 97 TYVRNITDIDDKIIKRAAENNETCQQLTERMMIEMYRDFDALNILRPDEEPQATAHIAEI 156
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
+ +I+KLI AY +GDV ++V++ NYG LS N +
Sbjct: 157 IALIKKLIEGKHAYI----AADGDVVFAVKSAPNYGLLS----RQNLEHLQAGARVAIAD 208
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DP+DF LWK + DP W+S WGAGRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 209 GKEDPMDFVLWKRALPGDP---SWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDL 265
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ +VNYWMH+G V + KMSKS NF TIRDLL Y+ E +R
Sbjct: 266 LFPHHENEIAQSTCAHGDPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLDHYDAETVR 325
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ +HYRS ++YSE L ++ +L RLY+A++ + E KRF AM+
Sbjct: 326 YFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTDET--ASTAAAGENFEKRFRDAMD 383
Query: 359 DDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A ++LFD+A +N+ K+ +A LR + LGLL + FL+
Sbjct: 384 DDFNTPEACAVLFDIAREVNRLKTEDNAAASGLAATLRSMAQVLGLLTQKPEHFLQA--- 440
Query: 413 TERKKNVNYSE-NDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN+SE I++ I R+ AR++KN+ AD R +L I LED P G T WRR
Sbjct: 441 ------VNHSEIAKIEVLIEQRNTARQQKNWALADAARHQLNEMKITLEDGPKGTT-WRR 493
>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 447
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/456 (48%), Positives = 298/456 (65%), Gaps = 22/456 (4%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YDYCH+GHAR+M+ FD + R+LR + V Y+RNITDIDDKII A +N E+
Sbjct: 1 MYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRYIRNITDIDDKIIKRANENGET 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I+ LT+RFI A ED+ L PD P AT YI Q+ MI L+ G AY +NG
Sbjct: 61 IQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---KKDPLDFALWKVSKNNDPYEIRWN 203
DV + V F YG+LSGR + +E+ + KK P DF LWK +K N+P W
Sbjct: 117 DVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEP---SWA 173
Query: 204 SKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWM 263
S WG GRPGWHIECSAMS LG+HFDIHGGG DL FPHHENEIAQSE + ++VNYWM
Sbjct: 174 SPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWM 233
Query: 264 HSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKS 323
H GF+ ++ +KMSKS GNF TIRD+++K++PEVIR+FI+ SHYRS +N+S++ L AK S
Sbjct: 234 HVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTS 293
Query: 324 LIRLYLAIKDIPKINYKKIID-LNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKS 382
L R Y + K ++ + + L++ +RF AM DDFNT A+++LF+L +N+
Sbjct: 294 LTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNAMCDDFNTAEAMAVLFELNKELNRAVK 353
Query: 383 IKMAKQ-------LRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSE 435
+ A Q LR L N LGL++++ D+FLK++I + + S+ +I+ I R +
Sbjct: 354 EEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDI---GQDALALSDAEIEDFIQQRVD 410
Query: 436 ARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
A+K K+F +AD IRQ L+ G++LED G T WRR
Sbjct: 411 AKKAKDFAKADSIRQSLLEQGVVLEDTRQG-TVWRR 445
>gi|33592950|ref|NP_880594.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|384204248|ref|YP_005589987.1| cysteinyl-tRNA synthetase [Bordetella pertussis CS]
gi|61216293|sp|Q7VX96.1|SYC_BORPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33572598|emb|CAE42190.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|332382362|gb|AEE67209.1| cysteinyl-tRNA synthetase [Bordetella pertussis CS]
Length = 486
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/491 (45%), Positives = 301/491 (61%), Gaps = 30/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ SR K+ F P G+V +YVCG+T YDYCHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L +QPPD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEYYIAAMHADERALGVQPPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
L +I +L GLAY+ +GDVNY+VR F +YGKLSG+ S + + E+ + K
Sbjct: 122 LDIIGRLESKGLAYRAE----DGDVNYAVRGFADYGKLSGK--SLDDLRAGERVAVGSAK 175
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+DPLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKF
Sbjct: 176 RDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDLKF 235
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKK--------- 291
PHHENEIAQ+EGA+ N WMH G + ++ KMSKS GNF TIR + +
Sbjct: 236 PHHENEIAQTEGAFGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDTQAE 295
Query: 292 --YNP---EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN 346
NP E++RFFI+R+HYRS NY+ L A+ +L RLY A+++ + + +
Sbjct: 296 YAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNT-AADGQGVDWSE 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
EP A+ F AM+DDFN+ A++ LF+LA+ N+ S + QL+ LG LGLL+ +
Sbjct: 355 EPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAVGQLKALGAVLGLLQQDPPAY 414
Query: 407 LKNNI-YTERKKNVN-----YSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ Y+ + I+ +I R+ A+ ++F AD IR EL GI L+
Sbjct: 415 FQSPTRYSAAARGQGAPAAALDAAAIEARIAERAAAKAARDFARADAIRAELRAAGIELD 474
Query: 461 DMPNGKTEWRR 471
D P G T+WRR
Sbjct: 475 DKPGGLTQWRR 485
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/475 (45%), Positives = 290/475 (61%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS SR+K+ F PI PGK+ +YVCG+T YD CH+GH R + FD++ R+LR Y+V
Sbjct: 2 LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y RNITD+DDKII A +N ES +LT R I D L++ P ++P AT +I +I
Sbjct: 62 NYQRNITDVDDKIIKRANENGESCDSLTERLIGEMHADFDALNMVRPSFEPRATLHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+ +L+ G AY +GDV + V ++ YG+LSG+ L E + K++
Sbjct: 122 IDMVTRLLDRGHAYV----AADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDENKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL+FPH
Sbjct: 178 PMDFVLWKMSK---PGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VN WMH+G V ++ +KMSKS GNF TIRD+L Y+ + +R+F+L
Sbjct: 235 HENEIAQSCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLAHYDAQTVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ SL R+Y A+K + D RF+ AM+DDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARASLERMYTALKGLDLTVEAAGAD---EFVSRFMAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+ IN+ K+ MA L+ L LG+L + + FL+ +
Sbjct: 352 TPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQGEGNADEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R+ AR K++ AD R L G++LED P G T WR+
Sbjct: 412 A-------EIEALIVERNRARAEKDWPAADVARDRLNALGVVLEDGPEGTT-WRK 458
>gi|386033536|ref|YP_005953449.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|424829340|ref|ZP_18254068.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424934716|ref|ZP_18353088.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|339760664|gb|AEJ96884.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|407808903|gb|EKF80154.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|414706759|emb|CCN28463.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 461
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDK---SADAAGGEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQVDDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|417363990|ref|ZP_12137052.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|353598700|gb|EHC55077.1| Cysteinyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 292/474 (61%), Gaps = 23/474 (4%)
Query: 5 RIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVT 64
+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 1 KIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLK 60
Query: 65 YVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQIL 124
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I+
Sbjct: 61 YVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEII 120
Query: 125 KMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDP 183
++ LI G AY +NG DV + V YG+LS + L + + K++P
Sbjct: 121 ELTRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNP 176
Query: 184 LDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHH 243
+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPHH
Sbjct: 177 MDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHH 233
Query: 244 ENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILR 303
ENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 234 ENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMS 293
Query: 304 SHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNT 363
HYRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFNT
Sbjct: 294 GHYRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFNT 350
Query: 364 PVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
P A S+LFD+A +N+ K + MA LR + LGLLE D FL++ + +
Sbjct: 351 PEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDGE 410
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 411 VA-----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 458
>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 459
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/475 (44%), Positives = 300/475 (63%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+
Sbjct: 2 VQIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N E+I LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENGEAINDLTVRMTKAMHEDFDSLNMLRPDIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IAMVERLIAKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS NF T+R++LK+Y+ E +R+F++
Sbjct: 235 HENEIAQSCCANNGQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++ + + + ++ NE + +F AMNDDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVECE--LEGNE-YVAKFRKAMNDDFN 351
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
+P A+ ++F++A +N+ K+ +A LR LG LG+ + + + FL+ +
Sbjct: 352 SPEALPVVFEVAKELNRVKDSDSEKAGHLAFILRSLGEILGIAQQAPEAFLQGGQNDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R++AR KN+ AD+ R L G++LED GKT WR+
Sbjct: 412 A-------EIEALIVKRNDARASKNWAAADEARDALNALGVVLEDSA-GKTTWRK 458
>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 464
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/480 (46%), Positives = 296/480 (61%), Gaps = 30/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +++K+ F PI PGKV +YVCG+T YD CH+GH R + FD+V R+LR + YD+
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES +LT R I +D L ++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHKDFDALGMKRPDIEPRATEFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M E+LI G AY +NG DV + V F YG+LS + L + + K+
Sbjct: 122 ITMCERLIERGFAYVASNG----DVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDMAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCATGSQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAESVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ ++ + E RF +MNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTSLR---GLDLTAQAEGGEEFVTRFTASMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK-----------MAKQLRGLGNWLGLLEYSSDEFLKNNI 411
TP A S+LFD+ IN+ K+ + + +LR L + LGLL + FL+
Sbjct: 352 TPEAYSVLFDMVREINRLKADETIADNIAQASALGARLRELADILGLLSQDPEAFLQGGA 411
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +AR K++ AD R +L+ IILED P G T WRR
Sbjct: 412 GQDDVA-------EIESLIQQRLDARAAKDWAAADAARDKLLAMKIILEDGPQGTT-WRR 463
>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425068915|ref|ZP_18472031.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|425071558|ref|ZP_18474664.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|229470558|sp|B4F1M6.1|SYC_PROMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404598416|gb|EKA98886.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|404598815|gb|EKA99283.1| cysteinyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 463
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/475 (46%), Positives = 293/475 (61%), Gaps = 22/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI GK+ +YVCGIT YD CH+GH R + FD + R+LR YDV
Sbjct: 2 LKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TD+DDKII A +NNE+ + LT+R + +D L+I PD +P AT++I +I
Sbjct: 62 NYVRNVTDVDDKIIKRAIENNETCEQLTTRMLAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E LI G AY NG DV +++ +YG LS + L E N K++
Sbjct: 122 IALTETLIKRGHAYVAENG----DVMFAIDTDPDYGLLSRQDLEQLQAGARVEVANVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYWMHSG V ++ +KMSKS NF TIRD+L Y+ E +R+F+L
Sbjct: 235 HENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAYYDAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NY+E L A+ +L RLY +++ + E +FI AMNDDFN
Sbjct: 295 SGHYRSQLNYTEENLKQARTALERLYTSLR---GTDANAQPAGGEAFEAQFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA +N+ K++ M A LR L LGLLE + FL++ +
Sbjct: 352 TPEAYSVLFDLAREVNRLKTVNMEAANGLAAVLRKLAKVLGLLEQQPEHFLQSGAQADDA 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V I+ I R++ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 DEV----EKIEALIQQRNDARKNKDWAAADAARDALTAMGIVLEDGPQGTT-WRR 461
>gi|290510194|ref|ZP_06549564.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|289776910|gb|EFD84908.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 461
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/477 (47%), Positives = 297/477 (62%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMNDD 360
HYRS +NYSE L A+ +L RLY A++ K +D E RFI AM+DD
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR-----GTDKSVDAAGGEAFEARFIEAMDDD 349
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++ +
Sbjct: 350 FNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSGAQVD 409
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R ARK K++ AD R L GI+LED P G T WRR
Sbjct: 410 DAEVA-----EIESLIQQRLNARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|400406322|ref|YP_006589070.1| cysteinyl-tRNA synthetase [secondary endosymbiont of Heteropsylla
cubana]
gi|400364575|gb|AFP85642.1| cysteinyl-tRNA synthetase [secondary endosymbiont of Heteropsylla
cubana]
Length = 462
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/476 (46%), Positives = 300/476 (63%), Gaps = 24/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +K++F PI GKVS+YVCG+T YD+CH+GHAR IVFD+V R+LR Y V
Sbjct: 2 LKIFNTLRHQKEVFKPICVGKVSIYVCGVTVYDFCHIGHARTFIVFDMVTRYLRHCGYTV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
Y+RNITDI+DKII A +N E+ LT R I + + D LHI PP+ +PCAT +IP+I
Sbjct: 62 NYIRNITDIEDKIIRRAAENKETCHNLTLRMISSMRSDFEKLHILPPNKEPCATQHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++ + KLI AY +NG DV +SV NYG LS + L + + + K+D
Sbjct: 122 IEFVAKLIRRDHAYIADNG----DVMFSVDTDKNYGLLSRQDLDQLQVDTRAKIPSIKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
DF LWK +K N+P W S WGAGRPGWHIECSA++ LG HFDIHGGG DL FPH
Sbjct: 178 FRDFVLWKKAKPNEP---SWESPWGAGRPGWHIECSAINRQQLGHHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS + +VN WMH+G V N +K+SKS NF T+R++L+ Y+PE +R+F++
Sbjct: 235 HENEIAQSTCSQDGPYVNIWMHAGMVMFNREKISKSSNNFFTVREVLQDYDPETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS I+YSE L A+ +L LYLA++ + + E +RFI AMNDDFN
Sbjct: 295 SAHYRSPIHYSESNLKQARSALEHLYLALRG---TSTTALPSGGEEFIERFIKAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAKQLRG-------LGNWLGLLEYSSDEFLKNNIYTER 415
TP A S+LF++A+++N K K+ K++ G LG LGL + + FLK
Sbjct: 352 TPEAYSVLFNVAHVVNSLKRKKLTKEVEGMAATLRYLGGILGLFKQPTHLFLKKIREDNL 411
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+KN+ I+ I R+EARK K + AD +R +L IILED KT WRR
Sbjct: 412 EKNII-----IEALIQKRNEARKVKQWDVADAVRNKLTALDIILED-SEEKTFWRR 461
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/483 (45%), Positives = 296/483 (61%), Gaps = 31/483 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR+K+ F PI GKV LYVCG T YD CH+GH R I FD + R+LR + YDV
Sbjct: 2 LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD++DKII A +NNE+ + LT R I A +D L++ PD +P T ++ +I
Sbjct: 62 NYVRNITDVEDKIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEI 121
Query: 124 LKMIEKLIFNGLAY---QNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----E 175
+ MIE L+ AY N GDV + V ++ +YGKLSG+ N ++ E
Sbjct: 122 IAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQ----NLEQLQSGSRVE 177
Query: 176 KNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGG 235
+ K +PLDF LWK +K P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG
Sbjct: 178 VDQNKNNPLDFVLWKSAK---PGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGG 234
Query: 236 QDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
DL FPHHENEIAQS A +VNYWMH+G V+++ +KMSKS GNF TIRD+L +Y+ E
Sbjct: 235 SDLTFPHHENEIAQSCCALNTPYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLAQYDAE 294
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII 355
+RFF+ HYRS +NYS L A+ S+ R+Y +++D+ I +I+ + K+F
Sbjct: 295 TVRFFLTTGHYRSQLNYSTDNLTQARASVERIYTSLRDV-NIESDYVINKDSSFVKQFCQ 353
Query: 356 AMNDDFNTPVAISILFDLAN-------IINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
AM+DDFNTP A+++LF+++ N +I +A L LG +GLL+ FL+
Sbjct: 354 AMDDDFNTPQALAVLFEISKELNVAKAAANNALAIDLASTLVALGEIVGLLQLDPAAFLQ 413
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ N N I+ I R++AR K++ AD R +L I+LED GKT
Sbjct: 414 GD-------NDNDEVAIIEALIVQRNQARIDKDWAMADDARDKLNAMNIVLEDSA-GKTT 465
Query: 469 WRR 471
WR+
Sbjct: 466 WRK 468
>gi|54308291|ref|YP_129311.1| cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
gi|61216519|sp|Q6LT67.1|SYC1_PHOPR RecName: Full=Cysteine--tRNA ligase 1; AltName: Full=Cysteinyl-tRNA
synthetase 1; Short=CysRS 1
gi|46912719|emb|CAG19509.1| putative cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 464
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/480 (45%), Positives = 298/480 (62%), Gaps = 30/480 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +++K+ F PI PGK+ +YVCG+T YD CH+GH R + FD+V R+LR + YD+
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N ES ++LT R I +D L ++ PD +P AT +I +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGESCESLTERLIGEMHKDFDALGMKRPDIEPRATEFIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ + E+LI G AY +NG DV + V F YG+LS + L + + K+
Sbjct: 122 IILCERLIERGFAYVASNG----DVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDMAKRS 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK+SK P E W S WGAGRPGWHIECSAM+ +LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKMSK---PGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSCCATGSQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDAESVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ ++ + E RF +MNDDFN
Sbjct: 295 SGHYRSQLNYSEDNLKQARSALERLYTSLR---GLDLTAQAEGGEEFVTRFTASMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK-----------MAKQLRGLGNWLGLLEYSSDEFLKNNI 411
TP A S+LFD+A IN+ K+ + + +LR L + LGLL + FL+
Sbjct: 352 TPEAYSVLFDMAREINRLKADETIANNIVQASALGARLRELADILGLLSQDPEAFLQGGA 411
Query: 412 YTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ + R +AR K++ AD R +L+ IILED P G T WRR
Sbjct: 412 GQDDVA-------EIETLVQQRLDARAAKDWAAADAARDKLLAMKIILEDGPQGTT-WRR 463
>gi|444352744|ref|YP_007388888.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|443903574|emb|CCG31348.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 461
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 296/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDNEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIARGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSAQPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANALAAHMRKLASVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIERLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 299/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+EKLI NG AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 VAMVEKLIANGHAYV----AADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ +VNYW+H+G + I+++KMSKS GNF TIR +L+KY E +R+F L
Sbjct: 235 HENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLEKYESETLRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+HYRS +NYS L+ A+ +L RLY +++ ++ + + E + + F AM+DDFN
Sbjct: 295 TAHYRSLLNYSLDNLDLARSALERLYTSLRGC-DLSVEAVG--GEQYVEAFKAAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIKMAK------QLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF++A +NK K+ +AK +L+ L LGLL + FL+ +
Sbjct: 352 TPGALAVLFEIAREVNKLKTEDVAKANGLAVRLKELAGVLGLLYQDPEAFLQGDAD---- 407
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
N +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 ---NDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/476 (45%), Positives = 294/476 (61%), Gaps = 27/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K F P+ GKV +YVCGIT YD+CH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNESI LT R KA ED L++ P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++MI +LI G AY +G DV + V F YG+LS + L E K D
Sbjct: 122 IEMIARLIEKGHAYVAKDG----DVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEPA---WQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS GNF T+R++LK ++ E +R+F++
Sbjct: 235 HENEIAQSCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL-NEPHAKRFIIAMNDDF 361
HYRS +NYS+ L A+ SL R+Y A++ + + I+L +A+RF AMNDDF
Sbjct: 295 NGHYRSQLNYSQENLEQARSSLERIYTALRGVELVE----IELKGNAYAERFETAMNDDF 350
Query: 362 NTPVAISILFDLANIIN--KNKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+ ++F+L+ +N K+ K A + L L LG+ + + FL+ +
Sbjct: 351 NTPEALPVIFELSKEVNRLKDSDAKAAGEHAFILVKLAEILGIAQQDPESFLQGEQDDDE 410
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R AR+ K++ AD+ R L G++LED GKT WR+
Sbjct: 411 VAQ-------IEALIEKRRSARENKDWAAADEARDALTALGVVLEDSA-GKTTWRK 458
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/479 (45%), Positives = 297/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR + Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT++I +I
Sbjct: 62 CYVRNITDVDDKIIKRAIENNETCDQLVDRMIAEMHKDFDALNILRPDVEPRATHHISEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+EKLI NG AY +GDV + V +F YG LS N +++ E +
Sbjct: 122 IAMVEKLIANGHAYV----AADGDVMFDVESFPKYGALS----RQNLDQLQAGARVEIKS 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P+DF LWK+SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 VKKNPMDFVLWKMSKENEP---SWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A +VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R
Sbjct: 231 MFPHHENEIAQSCCANHGNYVNYWLHTGMLTIDKEKMSKSLGNFFSIRYMLDLYDAESLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F L +HYRS ++YS LN A+ +L RLY A++ K E + + F AM+
Sbjct: 291 YFFLTAHYRSLLDYSIDNLNLARSALERLYTALRGCDLTVPAKG---GEQYVEAFKTAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+++LF++A +NK K+ +A L+ L LGLLE + FLK +
Sbjct: 348 DDFNTPGALAVLFEIAREVNKLKTEDAETANGLAVCLKELAGVLGLLEQDPETFLKGDAN 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R+EA+ KN+ AD++R +L I+LED PNG T WR+
Sbjct: 408 DDEAA-------EIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPNGTT-WRK 458
>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|109894923|sp|Q3IF51.1|SYC_PSEHT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/475 (45%), Positives = 296/475 (62%), Gaps = 25/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+ IYN+ +R+K+ F P+ GK+ +YVCGIT YDYCH+GHAR + FD++ R+LR YD+
Sbjct: 2 VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +N ESI LT R KA ED L++ PD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIKRANENGESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVTAHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++M+E+LI G AY +GDV + V F YG LS + L E K D
Sbjct: 122 IEMVERLITKGHAYV----AADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W+S WG GRPGWHIECSAMS LG HFDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A K+VN W+H+G V++N +KMSKS NF T+R++LK+Y+ E +R+F++
Sbjct: 235 HENEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLKQYDAESVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L+ A+ SL R+Y A++ + + + +D NE + +F AM+DDFN
Sbjct: 295 SGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVACE--LDDNE-YVIKFRKAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ +LF+LA +N K I ++A L + LG+ + + FL+ +
Sbjct: 352 TPEALPVLFELAKELNLVKDIDSQQAGQLAFILGSISEVLGVAQQDPEAFLQGGQDDDEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R++AR KN+ AD+ R L G+ILED GKT WR+
Sbjct: 412 AQ-------IEALIVKRNDARASKNWAAADEARDALSALGVILEDSA-GKTTWRK 458
>gi|384542068|ref|YP_005726129.1| cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
gi|417721414|ref|ZP_12370260.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
gi|417726860|ref|ZP_12375604.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
gi|420340090|ref|ZP_14841617.1| cysteinyl-tRNA synthetase [Shigella flexneri K-404]
gi|281599852|gb|ADA72836.1| Cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332763819|gb|EGJ94057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
gi|333021864|gb|EGK41112.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
gi|391273930|gb|EIQ32748.1| cysteinyl-tRNA synthetase [Shigella flexneri K-404]
Length = 461
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/479 (46%), Positives = 295/479 (61%), Gaps = 31/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +N DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNS----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----RMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L A+ +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG---GEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|437755435|ref|ZP_20834252.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435310569|gb|ELO84997.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
Length = 477
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/472 (47%), Positives = 290/472 (61%), Gaps = 23/472 (4%)
Query: 7 YNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYV 66
+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y + YV
Sbjct: 21 FNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYV 80
Query: 67 RNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKM 126
RNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I+++
Sbjct: 81 RNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEIIEL 140
Query: 127 IEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLD 185
LI G AY +NG DV + V YG+LS + L + + K++P+D
Sbjct: 141 TRTLIEKGHAYVADNG----DVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMD 196
Query: 186 FALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHEN 245
F LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPHHEN
Sbjct: 197 FVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHEN 253
Query: 246 EIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSH 305
EIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++ H
Sbjct: 254 EIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGH 313
Query: 306 YRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPV 365
YRS +NYSE L A+ SL RLY A++ K E RF+ AMNDDFNTP
Sbjct: 314 YRSQLNYSEENLKQARASLERLYTALRGTDK---SAAPAGGEAFEARFVEAMNDDFNTPE 370
Query: 366 AISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNV 419
A S+LFD+A +N+ K + MA LR + LGLLE D FL++ + +
Sbjct: 371 AYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDGEVA 430
Query: 420 NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+I+ I R +ARK K++ AD R L GIILED P G T WRR
Sbjct: 431 -----EIEALIQQRLDARKAKDWAAADAARDRLAEMGIILEDGPQGTT-WRR 476
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 297/479 (62%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ R+K+ F PI P +V +YVCG+T YD CH GH R + FD++ R+LR + Y++
Sbjct: 2 LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNES + L R I D L+I PD +P AT +I +I
Sbjct: 62 RYVRNITDVDDKIIKRALENNESCEALVERMIAEMHNDFDALNIMRPDVEPRATEHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-----EKNN 178
+ M+EKLI NG AY +GDV + V +F YG LS N +++ E +
Sbjct: 122 IAMVEKLIMNGHAYV----AADGDVMFDVTSFNQYGALS----RQNLDQLQAGARVEIKS 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P+DF LWK SK N+P W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 AKKNPMDFVLWKRSKENEP---SWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A++ ++VNYW+H+G + I+ +KMSKS GNF +IR +L Y+ E +R
Sbjct: 231 MFPHHENEIAQSCCAHQGEYVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGLYDAESLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F L +HYRS ++YS L+ A+ +L RLY A++ + + E + F AM+
Sbjct: 291 YFFLTAHYRSLLDYSTDNLDLARSALERLYTALR---GCDLSVQANGGENYVTAFKTAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A+++LF++A +NK K+ +A L+ L LGLL D FLK +
Sbjct: 348 DDFNTPAALAVLFEMAREVNKLKTEDQQQANALAVCLKELAAVLGLLTQDPDNFLKGEVN 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
++ +I+ I R++A+ KN+ AD++R +L I+LED P G T WR+
Sbjct: 408 IDQTA-------EIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLEDTPTG-TVWRK 458
>gi|336249110|ref|YP_004592820.1| cysteinyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|334735166|gb|AEG97541.1| cysteinyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
Length = 461
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 295/475 (62%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHTDFDALNILRPDNEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIARGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ K E RFI AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALRGTDKSAQPAG---GEAFEARFIEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A +R L + LGLLE D FL++ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDAAAANALAAHMRKLSSVLGLLEQEPDAFLQSGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIERLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/491 (45%), Positives = 296/491 (60%), Gaps = 36/491 (7%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LR+YN+ + +K+ F P+ PGKV +YVCG+T YDYCH+GHAR +VFDI+ R+L+ +D
Sbjct: 2 SLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGFD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TD+DDKII A + S TL FI+A ED L + P QP AT +I
Sbjct: 62 VTYVRNYTDVDDKIIKRANERGISSDTLAGEFIQAFDEDMNRLGLAEPTIQPKATCHIDH 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
I+ ++++LI G+AY++ GDV +SV +F +Y KLS R N +++
Sbjct: 122 IVNLVQRLIDRGIAYESQ-----GDVYFSVEDFPSYLKLSKR----NMDEMRSGARITPG 172
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K++P+DFALWK +K P E W S WG GRPGWHIECSAMS LG FDIHGGG+D
Sbjct: 173 EQKRNPMDFALWKAAK---PGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKD 229
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSEGA FV YW+H+GFV +N +KMSKS GNF TIRD+L+ Y+PEV+
Sbjct: 230 LVFPHHENEIAQSEGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQTYDPEVL 289
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI-----NYKKIIDLNEPHAKR 352
RFFIL +HYRS I++S+ L A+ L R Y + ++ +
Sbjct: 290 RFFILTAHYRSPIDFSDQNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATLENV 349
Query: 353 FIIAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGLGNWLGLLEYSSDE 405
F AM+DDFNT AI LFD IN+ K+ + Q+R L + L L
Sbjct: 350 FREAMDDDFNTAAAIGHLFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLGGVLGL 409
Query: 406 FLKNNIYTERKKNV------NYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
F+ + ++ N+ Y+E+DI+ I R EARK K+F AD+IR EL GI L
Sbjct: 410 FVSDPAAWLKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAAKGIQL 469
Query: 460 EDMPNGKTEWR 470
D P G T W+
Sbjct: 470 LDGPQG-TAWK 479
>gi|424040775|ref|ZP_17778852.1| cysteine--tRNA ligase [Vibrio cholerae HENC-02]
gi|424045351|ref|ZP_17782916.1| cysteine--tRNA ligase [Vibrio cholerae HENC-03]
gi|408886401|gb|EKM25075.1| cysteine--tRNA ligase [Vibrio cholerae HENC-03]
gi|408891481|gb|EKM29277.1| cysteine--tRNA ligase [Vibrio cholerae HENC-02]
Length = 436
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/452 (46%), Positives = 283/452 (62%), Gaps = 24/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GH R + FD+V R+LR YD+T+VRNITDIDDKII A +N ES
Sbjct: 1 MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDLTFVRNITDIDDKIIKRAAENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
+LT R I D L+++ PD +P AT +I +I++++EKLI G AY +NG
Sbjct: 61 CDSLTERLIGEMHADFDALNMKRPDVEPRATQFIAEIIELVEKLIERGFAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + V F YGKLS + L + K+ PLDF LWK+SK P E W S
Sbjct: 117 DVMFEVGKFNEYGKLSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSK---PGEPTWESP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPHHENEIAQS A+ ++VN WMHS
Sbjct: 174 WGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYVNTWMHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G V ++ +KMSKS GNF TIRD+L Y+ E +R+F++ HYRS +NYSE LN A+ SL
Sbjct: 234 GMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQARASLE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINK------ 379
RLY +++ ++ E + RF AMNDDFNTP A S+LFD+A +N+
Sbjct: 294 RLYTSLR---GLDLNAAPAGGEEYVTRFTAAMNDDFNTPEAYSVLFDMAREVNRLKTENL 350
Query: 380 NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
K+ ++ +R L + +G+L + FLK + + + +I+ I R+++R
Sbjct: 351 EKASELGALMRELADVIGILHQDPEAFLKGDAGDDDEVA------EIEALIKLRNDSRAA 404
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ AD R +L GI+LED P G T WRR
Sbjct: 405 KDWANADMARDKLTEMGIVLEDGPEGTT-WRR 435
>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
Length = 476
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/478 (45%), Positives = 300/478 (62%), Gaps = 26/478 (5%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
S L+I+N+ +R+K+ F PI P KV +YVCG+T YD CH GH R + FD++ R+LR Y
Sbjct: 18 SMLKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGY 77
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
D+ YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP
Sbjct: 78 DLRYVRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHIP 137
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFK 180
+I+ M+E LI G AY +G DV + V +F YG LS + L E + K
Sbjct: 138 EIIAMVETLIRRGHAYVAEDG----DVMFDVESFQKYGALSRQNLEQLQAGARVEIKSVK 193
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
K+P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL F
Sbjct: 194 KNPMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMF 250
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ ++VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F
Sbjct: 251 PHHENEIAQSCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDAESVRYF 310
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
L + YRS ++YSE + A+K+L RLY A++ + I + + F AM+DD
Sbjct: 311 FLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVE----IPAEDQYVIDFKTAMDDD 366
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A+++LF+LA INK K+ ++A +L+ L LGLLE + + FL+ +
Sbjct: 367 FNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGDA--- 423
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ I R+EAR K++ AD R EL G++LED G T WR++
Sbjct: 424 ----ADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLEDGAKGTT-WRKL 476
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/486 (45%), Positives = 305/486 (62%), Gaps = 43/486 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ S +K++F P+ KV +YVCG+T YDYCH+GHAR IVFD ++R+L+ +DV
Sbjct: 2 LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+V+N TD+DDKII A + N+SI +T FIKA ED L+I PDY P AT YI +
Sbjct: 62 TFVKNFTDVDDKIIKRANEENKSINEITDFFIKAHDEDMDKLNILRPDYTPRATEYIDGM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+K+ EKLI G AY++N GDV + VR F +YGKLS R L++ +NE
Sbjct: 122 IKLCEKLIEKGFAYESN-----GDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNE---I 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+DPLDFALWK SK +P W+S WG GRPGWHIECS MS +LG FDIHGGG+DL
Sbjct: 174 KEDPLDFALWKRSKEGEP---GWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLI 230
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A +F YW+H+GFV IN +KMSKS GNF TIRD+LK+ +PEV+RF
Sbjct: 231 FPHHENEIAQSEAAEGKEFARYWIHNGFVNINKEKMSKSLGNFFTIRDVLKEVDPEVLRF 290
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK--------KIIDLNEPHAK 351
F+L +HYRS +++S L A+ +L R+Y AI ++ + KI ++ + +
Sbjct: 291 FLLTTHYRSPLDFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKIDEIVDRFKR 350
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINKNKS------------IKMAKQLRGLGNWLGLL 399
F +M+DDFNT AIS +F+L +N S ++ + + + LG+L
Sbjct: 351 DFEESMDDDFNTASAISNIFELIKGVNLLLSERLNSEDLNYLKVRFEEVKAIIRDVLGIL 410
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
++ E+ K N+ + E++++ I R AR+ K+F +AD IR EL G+ L
Sbjct: 411 TKTASEWFKMNL--------SIDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVEL 462
Query: 460 EDMPNG 465
D P G
Sbjct: 463 LDTPTG 468
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/497 (43%), Positives = 305/497 (61%), Gaps = 42/497 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
LR+YN+ S +K+ F P GKV +YVCG+T YD+CH+GHAR IVFD++ R+LR + YD
Sbjct: 2 ALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTY+RN TDIDDKII A + +T+ R+I ED L + P +P AT++I
Sbjct: 62 VTYIRNYTDIDDKIINRANQEGTDYRTIADRYIATFDEDMDRLGMLRPTIEPKATDHIED 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNN 178
I+ +I++LI NG AY ++GDV ++V F Y KLSGR +++ ++E+
Sbjct: 122 IISIIQRLIDNGHAY-----AVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDER-- 174
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++P+DFALWK SK +P+ W S WG GRPGWHIECSAMS LG FDIHGGG+DL
Sbjct: 175 -KRNPMDFALWKGSKPGEPW---WESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEGA +FV YW+H+GFV IN++KMSKS GNF TIR++L+ ++PE +R
Sbjct: 231 VFPHHENEIAQSEGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFTIREVLELFDPETLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAK------- 351
FFIL++HYRS ++YS+ L A+ L R+Y A+ + + K ++ P +
Sbjct: 291 FFILQAHYRSPLDYSDQNLREAQAGLSRIYEALAALDQALEKPATAIHLPASAAEFAEKV 350
Query: 352 -----RFIIAMNDDFNTPVAISILFDLANIINK---------NKSIKMAKQLRG----LG 393
RF AM+DDFNT A+ LFD +N+ + S +QLR +G
Sbjct: 351 AGLLPRFREAMDDDFNTAQALGTLFDSIRTLNRLLAEGGGSSSASRADLEQLRAAVTEIG 410
Query: 394 NWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELV 453
LGL ++L E+ +++ S +I+ I R+ ARK K+F +D+IR L+
Sbjct: 411 AVLGLFRIKPSDWLAAR-EAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIRDYLL 469
Query: 454 NNGIILEDMPNGKTEWR 470
+ I L D P G T W+
Sbjct: 470 SRDIQLVDTPQG-TAWK 485
>gi|395235526|ref|ZP_10413735.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
gi|394729760|gb|EJF29694.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
Length = 461
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI GKV +YVCGIT YD CH+GH R + FD+V R+LR Y++
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRSLGYEL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R + +D L+I P+ +P AT +IP+I
Sbjct: 62 NYVRNITDIDDKIIKRAHENGEDFVALVDRMVVEMHKDFDALNISRPNSEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++++E+L+ AY NG DV +SV NYG LS + L + + K++
Sbjct: 122 IEIVEQLLARDHAYVAENG----DVMFSVLTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPAWTSPWGEGRPGWHIECSAMNCKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY +++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTSLR---GTDSSVAPAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ +A LR L LGLLE ++FL+ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKAEDLAAANGLAAALRKLSAILGLLEQDPEQFLQGGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R++AR+ K++ AD+ R L GI+LED G T WRR
Sbjct: 412 EVA-----EIEALIKQRNDARQSKDWALADQARDRLNEMGIVLEDGAGGTT-WRR 460
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/493 (46%), Positives = 313/493 (63%), Gaps = 44/493 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+N+ + KK+ F P+ KV +YVCG+T YDYCH+GHAR +VFDI++R+L YDV
Sbjct: 2 LIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYLIYKEYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+V+N TDIDDKII + + N K LT +FIK D L+I PPD+ P AT +I ++
Sbjct: 62 TFVKNFTDIDDKIIKRSNEENIHWKELTEKFIKEHDYDMEKLNIMPPDFTPKATEFIDEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+K+ EKLI G AY ++GDV Y V F +YGKLS R L++ +++E+
Sbjct: 122 IKLCEKLIEKGYAYV-----VDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDER--- 173
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++PLDFALWK SK N+PY W S WG GRPGWHIECS MS LLG FDIHGGG+DL
Sbjct: 174 KENPLDFALWKKSKENEPY---WESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLI 230
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A + F YW+H+GFV IN +KMSKS GNF TIR+++K+++PEV+RF
Sbjct: 231 FPHHENEIAQSEAAEEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREIIKEFDPEVLRF 290
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI-------NY-KKIIDLNEPHAK 351
F+L +HYRS I++S +L A++SL R+Y + D+ NY ++ + E K
Sbjct: 291 FLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIFENFKK 350
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQ-----LRGLGNW-------LGLL 399
F +M+DDFN+ A++ +FD IN+ + K+ K+ L+ N+ LG++
Sbjct: 351 EFETSMDDDFNSAKALAAIFDYIKEINRLLNQKVVKETYEEILKLTNNFKKIVNQVLGII 410
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
+ E+ +N+ SE+++ KI R+ ARK KNF ADKIR EL + GI L
Sbjct: 411 NKTPKEWFASNL--------PISESELIKKIEERTNARKNKNFELADKIRDELESLGIEL 462
Query: 460 EDMPNGKTEWRRI 472
D P G T +R I
Sbjct: 463 LDTPTG-TRYRAI 474
>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
Length = 413
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/431 (49%), Positives = 287/431 (66%), Gaps = 24/431 (5%)
Query: 46 MIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLL 105
M+ FD++ R+LR +DVTYVRNITDIDDKIIA A + + SI LT+++I A D+ L
Sbjct: 1 MVAFDVMVRYLRSQGFDVTYVRNITDIDDKIIARASERDVSIDELTAQYIDAMNNDTHAL 60
Query: 106 HIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR- 164
+I PPD++P AT +I I+++I++L+ G AY + NG DV Y V F YGKLS +
Sbjct: 61 NILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENG----DVCYEVDTFPEYGKLSHKD 116
Query: 165 ---LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMS 221
L+S + +I ++ K+ PLDF LWK +K P E W S WG GRPGWHIECSAM+
Sbjct: 117 IEGLVSGSRVEIVKE---KRSPLDFVLWKKAK---PGEPSWPSPWGEGRPGWHIECSAMA 170
Query: 222 CYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGN 281
+ LG FDIHGGG DL+FPHHENEIAQSE A F NYW+H G +++N +KM+KS GN
Sbjct: 171 MHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGN 230
Query: 282 FCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKK 341
F TI D+LK+++PEVIR+F+L SHYRS +NYSE L AKK+LIRLY A+KD+P
Sbjct: 231 FYTIADVLKEHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADS 290
Query: 342 IIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEY 401
+D E ++F AMNDDFNTPVA+S+LF LA+ +NK+ S +A L+ L LG L+
Sbjct: 291 KLD--EYWQEQFNQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQK 348
Query: 402 SSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILED 461
+ FL++ + E K I+ I R +AR +N+ +AD+IR +L++ GI LED
Sbjct: 349 DPESFLQSGLAEEEKLV-------IEQLIAERLQARAERNWAKADQIRTDLLSKGIELED 401
Query: 462 MPNGKTEWRRI 472
G T WRRI
Sbjct: 402 GATGTT-WRRI 411
>gi|406597253|ref|YP_006748383.1| cysteinyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
gi|406374574|gb|AFS37829.1| cysteinyl-tRNA ligase [Alteromonas macleodii ATCC 27126]
Length = 460
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/475 (45%), Positives = 300/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R++R DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IAIIQRLMDKGYAYQAKSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + DL+ + KRF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALR---GVEVDESTDLSYGGYLKRFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D FLK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNADEAGKLAAVLKGLGAILGMLQSDPDTFLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P+G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGPSGTT-WRK 459
>gi|88941991|sp|Q65UY1.2|SYC_MANSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 458
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/476 (45%), Positives = 299/476 (62%), Gaps = 26/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI P KV +YVCG+T YD CH GH R + FD++ R+LR YD+
Sbjct: 2 LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDVEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M+E LI G AY +G DV + V +F YG LS + L E + KK+
Sbjct: 122 IAMVETLIRRGHAYVAEDG----DVMFDVESFQKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F L
Sbjct: 235 HENEIAQSCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDAESVRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS ++YSE + A+K+L RLY A++ + I + + F AM+DDFN
Sbjct: 295 TAQYRSLLDYSEENIGLARKALERLYTALRGCETVE----IPAEDQYVIDFKTAMDDDFN 350
Query: 363 TPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF+LA INK K+ ++A +L+ L LGLLE + + FL+ +
Sbjct: 351 TPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGDA----- 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
+ + I+ I R+EAR K++ AD R EL G++LED G T WR++
Sbjct: 406 --ADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLEDGAKGTT-WRKL 458
>gi|429463245|ref|YP_007184708.1| cysteinyl-tRNA synthetase 2 [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|429338759|gb|AFZ83182.1| cysteinyl-tRNA synthetase 2 [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
Length = 456
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/461 (47%), Positives = 300/461 (65%), Gaps = 22/461 (4%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD+CHLGHAR+MIVFDIVQRWLR + V YVRNITDIDDKII + + +
Sbjct: 1 MYVCGMTVYDFCHLGHARVMIVFDIVQRWLRNIGFRVEYVRNITDIDDKIIKRSLELKKD 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I +T+ +I A D L + P+ +P AT+Y+ +++MI++L GLAY NG
Sbjct: 61 ISDITNFYISAMHADERALWVNSPNKEPRATHYVDHMIEMIQQLEKKGLAYHAENG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISS--NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNS 204
DVN+ VR+F +YGKLS + + S + ++ ++ K DPLDF LWK SK NDP + +WNS
Sbjct: 117 DVNFKVRSFPSYGKLSRKDLDSLRSGERVPVASD-KHDPLDFVLWKHSKENDPDDSKWNS 175
Query: 205 KWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMH 264
+G GRPGWHIECSAMS +LG DIHGGG DL FPHHENEIAQ+EG Y F + WMH
Sbjct: 176 CYGIGRPGWHIECSAMSHSILGLPIDIHGGGPDLIFPHHENEIAQTEGVYGGVFSHNWMH 235
Query: 265 SGFVKINNKKMSKSFGNFCTIRDLLKKYN------------PEVIRFFILRSHYRSTINY 312
G + +N+ KMSKS N+CTIR+ + N E++RFFI+R+HYRS NY
Sbjct: 236 CGPLMVNDYKMSKSLNNYCTIREAIGYGNLSNDEYCVNTREAEMLRFFIVRNHYRSKQNY 295
Query: 313 SEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFD 372
L A+ SL +LY AI + + + +D ++P A F AMNDDFNTP A++ILFD
Sbjct: 296 VIDNLIDAQSSLDKLYSAIINF-QFDSDYCVDWSDPSATEFAEAMNDDFNTPKAVAILFD 354
Query: 373 LANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY--TERKKNVNYSENDIKLKI 430
LA+ N++ ++ A+QL+ L + LGLL + + K+N + K+V S+ D++L +
Sbjct: 355 LASKANRDNCVRSARQLKSLSSILGLLNQDPENYFKSNTRYGSGSIKSVYLSDEDVELLV 414
Query: 431 YFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
RS+A+K ++ E+D IR L +GI +ED+PN T WRR
Sbjct: 415 LKRSQAKKNLDYKESDYIRNLLKESGIEVEDLPNYSTRWRR 455
>gi|423686370|ref|ZP_17661178.1| cysteinyl-tRNA synthetase [Vibrio fischeri SR5]
gi|371494438|gb|EHN70036.1| cysteinyl-tRNA synthetase [Vibrio fischeri SR5]
Length = 461
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/477 (45%), Positives = 295/477 (61%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ ++E+LI G AY +NG DV + V+ + YG+LS + + + E+ + K
Sbjct: 122 VALVERLIERGFAYVASNG----DVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEEASVK 177
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+ +DF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL F
Sbjct: 178 RSGMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F
Sbjct: 235 PHHENEIAQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE LN A+ SL RLY +++ ++ E RF AMNDD
Sbjct: 295 LMSGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVTPAGGEEFVGRFSTAMNDD 351
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LF++A +N+ + + K+ +R L + LGLL + FL+
Sbjct: 352 FNTPEAYSVLFEMAREVNRLKTENIDTASKLGALMRELADVLGLLSQEPEAFLQGG---- 407
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ N +I+ I R++AR K++ AD R + I+LED P G T WRR
Sbjct: 408 ---SGNDDVAEIEALIKARNDARAAKDWAAADAARDAIAALNIVLEDGPEGTT-WRR 460
>gi|407688198|ref|YP_006803371.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407291578|gb|AFT95890.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 300/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R++R DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IEIIQRLMDKGYAYQAKSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + +LN + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALR---GVTVDESTELNHGGYLTRFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D FLK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNVEEAGKLAAVLKGLGAILGMLQSDPDTFLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P+G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGPSGTT-WRK 459
>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/477 (45%), Positives = 295/477 (61%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYNS +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 1 MKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ LT R I D L+++ PD +P AT YI +I
Sbjct: 61 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ ++E+LI G AY +NG DV + V+ + YG+LS + + + E+ + K
Sbjct: 121 VALVERLIERGFAYVASNG----DVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEEASVK 176
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+ +DF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL F
Sbjct: 177 RSGMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMF 233
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F
Sbjct: 234 PHHENEIAQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYF 293
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE LN A+ SL RLY +++ ++ E RF AMNDD
Sbjct: 294 LMSGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVTPAGGEEFVGRFSTAMNDD 350
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LF++A +N+ + + K+ +R L + LGLL + FL+
Sbjct: 351 FNTPEAYSVLFEMAREVNRLKTENLDTASKLGALMRELADVLGLLSQEPEAFLQGG---- 406
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ N +I+ I R++AR K++ AD R + I+LED P G T WRR
Sbjct: 407 ---SSNDDVAEIEALIKARNDARAAKDWAAADAARDAIAALNIVLEDGPEGTT-WRR 459
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 298/484 (61%), Gaps = 43/484 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L I+N+ +R+K F P+ P KV +YVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE++ LT R + ED L++ PPD +P T ++ +I
Sbjct: 62 KYVRNITDVDDKIIQRAIENNETMSQLTERTVAMMHEDFAALNLLPPDIEPRVTTHMAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKN-----N 178
+++IEKL+ G AY ++G DV + V F +YG LS + + +++ +
Sbjct: 122 IEVIEKLVAKGHAYVASSG----DVLFDVSTFKDYGALSKQ----DLDQLQSGARVAVAD 173
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K DP+DF LWK +K N+P W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 GKDDPMDFVLWKKAKANEP---SWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENE+AQS A+ +VN W+H+G V+++N+KMSKS GNF T+R +L++++ E +R
Sbjct: 231 TFPHHENEVAQSCCAFDTPYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHKETLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-----PKINYKKIIDLNEPHAKRF 353
FF++ +HYRS ++YS+ L A+ L RLY A++D+ ++ Y + RF
Sbjct: 291 FFLMSAHYRSQLSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYL-------ARF 343
Query: 354 IIAMNDDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFL 407
AMNDDFNTP+A S+LFD A +NK KS ++A+ L LG LG L+ FL
Sbjct: 344 EAAMNDDFNTPIAFSVLFDCAKDLNKAKSTDPAEASRLAQVLISLGAILGCLQDDPVNFL 403
Query: 408 KNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
++ + + + I R++AR K++ AD R L G+++ED G T
Sbjct: 404 QS--------DADIDGEAVAALIAQRNQARADKDWGAADAARDALTAMGVVIEDSATGTT 455
Query: 468 EWRR 471
WR+
Sbjct: 456 -WRK 458
>gi|407684266|ref|YP_006799440.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
gi|407245877|gb|AFT75063.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'English Channel
673']
Length = 460
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 299/475 (62%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R++R DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IAIIQRLMDKGYAYQAKSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE-PHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + +LN + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALR---GVTVDESTELNHGGYLTRFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D FLK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNVEEAGKLAAVLKGLGAILGMLQSDPDTFLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P+G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGPSGTT-WRK 459
>gi|423013097|ref|ZP_17003818.1| cysteinyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
gi|338783933|gb|EGP48284.1| cysteinyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
Length = 484
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/488 (45%), Positives = 303/488 (62%), Gaps = 26/488 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYN+ SR K+ F P G+V +YVCG+T YD+CHLGHAR+++ FD+VQRWLR + V
Sbjct: 2 LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A + I +T +I A D L ++ PD +P AT Y+ ++
Sbjct: 62 DYVRNITDIDDKIIRRAVETGRRIGEVTEFYIAAMHADERALGVETPDREPRATQYVGEM 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
L +I KL GLAYQ ++G DVNY+VR F YGKLSG+ + + + K+D
Sbjct: 122 LDIIGKLEQKGLAYQADDG----DVNYAVRGFEGYGKLSGKTLDDLRAGERVAVGSAKRD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P + +W S +G GRPGWHIECSAMS LLG DIHGGG DLKFPH
Sbjct: 178 PLDFVLWKSAKEEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKFPH 237
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNP-------- 294
HENEIAQ+EGA+ N WMH G + +++ KMSKS GNF TIR + + P
Sbjct: 238 HENEIAQTEGAFGGVLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGEPAADVADYR 297
Query: 295 ------EVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP 348
E++RFFI+R+HYRS NY+ L A+ +L RLY A++++ + + ID +EP
Sbjct: 298 VNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVAADD--QGIDWSEP 355
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLK 408
A+ F AM+DDFN+ A++ LF+LA+ N+ K + A QL+ LG LGLL+ + +
Sbjct: 356 QAQAFKAAMDDDFNSSGAVAALFELASEANRGKRARSAGQLKALGGLLGLLQQDPAAYFQ 415
Query: 409 NNIY-----TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
+ E+ + I+ I R+ A+ ++F AD+IR EL + GI L+D P
Sbjct: 416 SATRYSAAGMEQGARAELDADAIQALIDARAAAKAARDFAAADRIRAELRDAGIELDDKP 475
Query: 464 NGKTEWRR 471
G T+WRR
Sbjct: 476 GGLTQWRR 483
>gi|59712207|ref|YP_204983.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
gi|71657967|sp|Q5E4F1.1|SYC_VIBF1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59480308|gb|AAW86095.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
Length = 461
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/477 (45%), Positives = 294/477 (61%), Gaps = 27/477 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IYNS +R+K+ F PIT GKV +YVCG+T YD CH+GH R + FD++ R+LR YD+
Sbjct: 2 LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRNITDIDDKII A +N E+ LT R I D L+++ PD +P AT YI +I
Sbjct: 62 TFVRNITDIDDKIIKRAAENGETCDALTERLIADMHADFDALNMKRPDVEPRATEYIKEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR---LISSNFNKINEKNNFK 180
+ ++E+LI G AY +NG DV + V+ + YG LS + + + E+ + K
Sbjct: 122 IALVERLIERGFAYVASNG----DVMFEVKKYDEYGCLSRQDLEQLQAGSRVTLEEASVK 177
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
+ +DF LWK+SK P E W S WG GRPGWHIECSAM+ +LG HFDIHGGG DL F
Sbjct: 178 RSGMDFVLWKMSK---PGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLMF 234
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEIAQS A+ +VN WMHSG V ++ +KMSKS GNF TIRD+L Y+ E +R+F
Sbjct: 235 PHHENEIAQSCCAHDTPYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLAHYDSETVRYF 294
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDD 360
++ HYRS +NYSE LN A+ SL RLY +++ ++ E RF AMNDD
Sbjct: 295 LMSGHYRSQLNYSEENLNQARASLERLYTSLR---GLDLSVTPAGGEEFVGRFSTAMNDD 351
Query: 361 FNTPVAISILFDLANIINK------NKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTE 414
FNTP A S+LF++A +N+ + + K+ +R L + LGLL + FL+
Sbjct: 352 FNTPEAYSVLFEMAREVNRLKTENIDTASKLGALMRELADVLGLLSQEPEAFLQGG---- 407
Query: 415 RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ N +I+ I R++AR K++ AD R + I+LED P G T WRR
Sbjct: 408 ---SSNDDVAEIEALIKARNDARAAKDWAAADAARDAIAALNIVLEDGPEGTT-WRR 460
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/476 (44%), Positives = 292/476 (61%), Gaps = 27/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K F P+ GKV +YVCGIT YD+CH+GHAR + FD++ R+LR YDV
Sbjct: 2 LQIFNTLTRQKAPFKPLKEGKVDMYVCGITIYDFCHVGHARTYVSFDVMNRYLRYLGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +N ESI LT R KA ED L++ P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENKESINDLTVRMTKAMHEDFTALNMLPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++MI +LI G AY +G DV + V F YG+LS + L E K D
Sbjct: 122 IEMIVRLIEKGHAYVAKDG----DVLFDVSTFEQYGQLSQQDLEMLQAGARVEVAQDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEPA---WQSPWGEGRPGWHIECSAMSSKHLGEFFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A ++VN W+H+G V++N +KMSKS GNF T+R++LK ++ E +R+F++
Sbjct: 235 HENEIAQSCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAFDRETVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL-NEPHAKRFIIAMNDDF 361
HYRS +NYS+ L A+ SL R+Y A++ + + ++L + +RF AMNDDF
Sbjct: 295 NGHYRSQLNYSQENLEQARSSLERIYTALRGVELVE----VELKGNAYVERFETAMNDDF 350
Query: 362 NTPVAISILFDLANIIN--KNKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTER 415
NTP A+ ++F+L+ +N K+ K A + L L LG+ + + FL+ +
Sbjct: 351 NTPEALPVIFELSKEVNRLKDSDAKAAGEHAFILVKLAEVLGIAQQDPESFLQGEQDDDE 410
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
I+ I R AR+ K++ AD+ R L G++LED GKT WR+
Sbjct: 411 VAQ-------IEALIEKRRSARENKDWAAADEARDALTALGVVLED-SAGKTTWRK 458
>gi|291616610|ref|YP_003519352.1| CysS [Pantoea ananatis LMG 20103]
gi|291151640|gb|ADD76224.1| CysS [Pantoea ananatis LMG 20103]
Length = 437
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/452 (47%), Positives = 289/452 (63%), Gaps = 23/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCGIT YD CH+GH R + FD+V R+LR +DV YVRNITDIDDKII A +N ES
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFDVNYVRNITDIDDKIIKRANENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
I+TLT+R I D L I PPD +P AT +IP+I++++EKLI G AY NG
Sbjct: 61 IETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEIVELVEKLIARGHAYVAENG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + V + ++YG LS + L E + K++P+DF LWK+SK ++P W S
Sbjct: 117 DVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKADEP---SWPSP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+C LG+HFDIHGGG DL FPHHENEIAQS A+ +VNYWMHS
Sbjct: 174 WGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G V I+ +KMSKS NF T+RD+L+ Y+ E +R+F++ HYRS +NY E LN A+ +L
Sbjct: 234 GMVMIDREKMSKSLNNFFTVRDVLQHYDAETVRYFLMSGHYRSQLNYGEDNLNQARAALE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY A++ + + D E RF AM+DDFNTP A S+LFD+A +N+ K M
Sbjct: 294 RLYTALR---HTDRNAVADGGEAFEARFREAMDDDFNTPEAYSVLFDMAREVNRLKGEDM 350
Query: 386 ------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
A +LR + N LG+L+ + FL+++ ++ +I+ + R++AR
Sbjct: 351 TAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDEEVA-----EIERWVKARADARAA 405
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ +AD R +L G+I+ED P G + WRR
Sbjct: 406 KDWAQADVARDKLNALGVIVEDGPQGSS-WRR 436
>gi|365848422|ref|ZP_09388898.1| cysteine--tRNA ligase [Yokenella regensburgei ATCC 43003]
gi|364570726|gb|EHM48329.1| cysteine--tRNA ligase [Yokenella regensburgei ATCC 43003]
Length = 461
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/475 (47%), Positives = 294/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGVVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R I +D L+I PD +P AT++IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVGLVDRMIIEMHKDFDALNILRPDSEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +SV + YG+LS + L + + K++
Sbjct: 122 IEITERLIERGHAYVADNG----DVMFSVPSDPTYGELSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEPA---WASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKFYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RFI AMNDDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR---GTDASAAAAGGEAFEARFIEAMNDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K+ MA LR L +GLLE + FL+ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKTEDADAASAMASHLRKLAGVIGLLEQDPEAFLQGGAQADDG 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIEQLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/493 (44%), Positives = 296/493 (60%), Gaps = 40/493 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+LR+YN+ S K++F P PGKV +YVCG+T YDYCH+GHAR IVFDIV R+L+ ++YD
Sbjct: 2 SLRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKYSDYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TD+DDKII A + + + L+ FI+A ED L + P QP AT +I
Sbjct: 62 VTYVRNYTDVDDKIINRANERGITSQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHIDH 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF--- 179
I+ ++E+LI NG AY ++ GDV ++V +F +Y KLS R N +++
Sbjct: 122 IIALVERLIANGKAYASD-----GDVYFAVESFDSYLKLSKR----NLDEMQAGARIAPG 172
Query: 180 --KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
K++P+DFALWK +K P E W S WG GRPGWHIECSAM LG FDIHGGG+D
Sbjct: 173 EKKRNPMDFALWKAAK---PGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKD 229
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHHENEIAQSE A FV YW+H+GFV +N +KMSKS GNF TIRD+LK Y+PEV+
Sbjct: 230 LVFPHHENEIAQSEAATGQPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKTYDPEVV 289
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK------KIIDLNEPHAK 351
RFFIL +HYRS I++S+ L A+ L R Y ++ ++ + + D E AK
Sbjct: 290 RFFILSAHYRSPIDFSDQNLKEARLGLSRFYEGLQAAAEVLAECPPSDVEATDGAELTAK 349
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRG-------LGNWLG 397
F AM+DDFNT AI LF+ +N+ K + +R LG LG
Sbjct: 350 -FREAMDDDFNTAQAIGYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLELGKVLG 408
Query: 398 LLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGI 457
+ +L N +++ + +I I R +AR+ K+F +D IR EL GI
Sbjct: 409 MFGSEPKAWL-NQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAEKGI 467
Query: 458 ILEDMPNGKTEWR 470
+L D G T+W+
Sbjct: 468 LLLDGAGG-TDWK 479
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/497 (43%), Positives = 301/497 (60%), Gaps = 41/497 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
LRIYN+ + +K F P+ PGK +YVCG+T YDYCH+GHAR +VFD++ R+L + Y
Sbjct: 2 ALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGYA 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TDIDDKII A + T++ R+I+A +D L + P +P AT+++
Sbjct: 62 VTYVRNFTDIDDKIINRANQEGVDYTTISERYIEAFNQDMARLGLAKPTVEPKATDHMGG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
I+ +IE LI G AY+++ GDV Y+V +F +Y +LSGR + E ++ K+
Sbjct: 122 IISVIETLIAKGHAYESD-----GDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDRKR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DFALWK SK P E W+S WGAGRPGWHIECSAMS LG FDIHGGG+DL FP
Sbjct: 177 NPMDFALWKGSK---PGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A +FV YWMH+GFV IN++KMSKS GNF TIR++L++Y+PE +RFFI
Sbjct: 234 HHENEIAQSEAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFTIREVLEQYDPETLRFFI 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAI---------KDIP--KINYKKIIDLN-EPH 349
L +HYRS I++S+ LN A+ L R+Y + +D+P + + E H
Sbjct: 294 LSAHYRSPIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPVEGAPLPPAGAELH 353
Query: 350 AK------RFIIAMNDDFNTPVAISILFDLANIINK---------NKSIKMAKQLRGL-- 392
K RF AM+DDFNT A+ +LF+ N+ ++ + Q+R L
Sbjct: 354 EKLQSLISRFREAMDDDFNTAQALGVLFEAVRATNRFMAESGDQTPATLALLGQVRRLFA 413
Query: 393 --GNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
G+ LGL +L+ +I + + S +I+ I R+ AR ++F D+IR
Sbjct: 414 ETGDVLGLFTSQPAAWLE-SIKQAKSDQMEISPQEIEQLIAERAAARTNRDFKRGDEIRD 472
Query: 451 ELVNNGIILEDMPNGKT 467
L+ GI L D P G T
Sbjct: 473 LLLQKGIQLLDSPQGTT 489
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/500 (42%), Positives = 290/500 (58%), Gaps = 42/500 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L +YN+ ++ K+ F P+ PGKV YVCG+T YD H+GHAR IVFD++ R+LR ++
Sbjct: 2 VLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFE 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TD+DDKII A +++ R+I A ED L + PD +P AT +P
Sbjct: 62 VTYVRNFTDVDDKIIRRANDAGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPLATENVPG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
++++I L+ G+AYQ DV + + F YGKLSGR I E + K+
Sbjct: 122 MIEIIRVLMDKGIAYQ-----AGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDARKR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+PLDF LWK SK +P W+S WG GRPGWHIECSAM LG FDIHGGG+DL FP
Sbjct: 177 NPLDFVLWKGSKPGEP---SWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A+ FV YW+H+GFV INN+KMSKS GNF TIRD+L+K +PE +RFF+
Sbjct: 234 HHENEIAQSEAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVLQKVHPETVRFFV 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLY--------LAIKDIPKINYKKIIDLNEPH---- 349
L HYRS +++S+ + A+K L RLY A + + +K + +P
Sbjct: 294 LSKHYRSPVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALRGQDPELFDQ 353
Query: 350 ----AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNW---------- 395
+ F AM++DFNT A+ LF L + + KQL+G +
Sbjct: 354 IAALSGAFREAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQLKGPASALARAGADAIR 413
Query: 396 -----LGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
LGLL + F + + K+ +E +++ I R +AR+ KNF EAD++R+
Sbjct: 414 DHALVLGLLTREPEAFQAEQ-RSLKIKSTGLTEAEVERCIELRRQARQDKNFAEADRLRE 472
Query: 451 ELVNNGIILEDMPNGKTEWR 470
E+ GI LED P G T WR
Sbjct: 473 EIEKKGIQLEDSPAG-TRWR 491
>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 436
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/452 (46%), Positives = 284/452 (62%), Gaps = 24/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GH R + FD+V R+LR YD+T+VRNITDIDDKII A +N ES
Sbjct: 1 MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDLTFVRNITDIDDKIIKRANENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
+LT R I D L+++ PD +P AT YI +I++++E LI G AY +NG
Sbjct: 61 CDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERGFAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + + + YGKLSG+ L E + K+ LDF LWK+SK P E W S
Sbjct: 117 DVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSK---PGEPTWESP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+ +LG+HFDIHGGG DL+FPHHENEIAQS A+ ++VN WMHS
Sbjct: 174 WGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYVNTWMHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G V ++ +KMSKS GNF TIRD+L Y+ E +R+F++ HYRS +NYSE LN A+ +L
Sbjct: 234 GMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEDNLNQARSALE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY +++ + + + E + RF AMNDDFNTP A S+LFD+A IN+ K+ +
Sbjct: 294 RLYTSLRGL-DLTVSAV--GGEEYVARFNDAMNDDFNTPEAYSVLFDMAREINRLKAEDV 350
Query: 386 AKQ------LRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
A +R L + +G+L + FLK + + + +I+ I R+++R
Sbjct: 351 AAASSLGVTMRQLADVIGILHQDPEAFLKGDAGNDDEVA------EIEALIKLRNDSRAS 404
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ AD R +L GI+LED P G T WRR
Sbjct: 405 KDWANADMARDKLTEMGIVLEDGPEGTT-WRR 435
>gi|422683333|ref|ZP_16741594.1| cysteinyl-tRNA synthetase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331012668|gb|EGH92724.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 391
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/378 (52%), Positives = 245/378 (64%), Gaps = 12/378 (3%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
L IYN+ ++ K++F P+ KV +YVCG+T YDYCHLGH R M+ FD+V RWLR + Y+
Sbjct: 7 VLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 66
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
+TYVRNITDIDDKII A+ N ES LT+R I A ED L+I PD +P AT++IP
Sbjct: 67 LTYVRNITDIDDKIINRARDNGESFDALTARMIDAMHEDEARLNILKPDMEPRATDHIPG 126
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
+ MI+ LI G AY NG DV Y V F YGKLS + I E + K+
Sbjct: 127 MHAMIQTLIDKGYAYAPGNG----DVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDESKE 182
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK K +P W S WGAGRPGWHIECS MS LG FDIHGGG DL+FP
Sbjct: 183 DPLDFVLWKGVKPGEP---SWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE A + N W+H G ++IN +KMSKS NF TIRD+L+KY+PEV+R+ +
Sbjct: 240 HHENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLEKYHPEVVRYLL 299
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDF 361
+ SHYRS INYSE L +K +L R Y A+K +P E +RF AMNDDF
Sbjct: 300 VSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAG----GEAFVERFSTAMNDDF 355
Query: 362 NTPVAISILFDLANIINK 379
TP A ++LF++ IN+
Sbjct: 356 GTPEACAVLFEMVREINR 373
>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 460
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 300/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R+LR DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IEIIQRLMDKGYAYQAKSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + DL+ + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALRGVV---VNESTDLSYGGYLARFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D +LK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P+G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGPSGTT-WRK 459
>gi|410862130|ref|YP_006977364.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
gi|410819392|gb|AFV86009.1| cysteinyl-tRNA ligase [Alteromonas macleodii AltDE1]
Length = 460
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 300/475 (63%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R+LR DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IEIIKRLMDKGYAYQAKSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + DL+ + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALRGVV---VNESTDLSYGGYLARFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D +LK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P+G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGPSGTT-WRK 459
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/502 (44%), Positives = 303/502 (60%), Gaps = 45/502 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+L++YN+ + KK++F PI G+V LYVCGIT YD CH+GHAR +VFD+++R+L Y+
Sbjct: 58 SLKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGYE 117
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTY++N TD+DDKIIA A SI + +R+I + +D L + P P AT +I +
Sbjct: 118 VTYIKNFTDVDDKIIARANAEGVSISEIANRYIASHDKDMDRLGVLRPTVTPRATEHIGE 177
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
++++I KL GLAY ++G+V Y+V F YGKLSGR + + N K
Sbjct: 178 MIELISKLQKRGLAYA-----VDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEHKN 232
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P+DFALWK SK N+P W+S WG GRPGWHIECS MS LG FDIHGGG+DL FP
Sbjct: 233 NPMDFALWKASKPNEPA---WDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFP 289
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSEG N W+H+GFVKIN++KMSKS GN TI+++L +Y+ EVIR F+
Sbjct: 290 HHENEIAQSEGVTGKPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTRYHAEVIRLFM 349
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI---------------PKINYKKIIDL- 345
L+SHYRS +++SE L+ A++ + R Y +K I P+ K +L
Sbjct: 350 LQSHYRSAVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPETLTGKTAELY 409
Query: 346 --NEPHAKRFIIAMNDDFNTPVAISILFDLANIINKN-KSIKMAKQLRG----------- 391
+ RF+ AM+DD NT AI LFD A IN + KMAK G
Sbjct: 410 AHVQGLPDRFVEAMDDDLNTARAIGYLFDAARQINGFIRDAKMAKSKEGWKVLALAGKSI 469
Query: 392 --LGNWLGLLEYSSDE-FLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKI 448
LG LGL + + D FL++ RK+ + +E I+L I R AR K++ +AD+I
Sbjct: 470 KDLGYVLGLFQENPDVYFLQDREREIRKRGLEPAE--IELLIADRWAARNDKDWHKADEI 527
Query: 449 RQELVNNGIILEDMPNGKTEWR 470
RQ L GI+L+D P G T W+
Sbjct: 528 RQLLTEKGIVLKDTPTGTT-WK 548
>gi|440509880|ref|YP_007347316.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia chromaiodes str.
640]
gi|440454093|gb|AGC03585.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia chromaiodes str.
640]
Length = 474
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/482 (48%), Positives = 295/482 (61%), Gaps = 26/482 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ ++KK+ F PI GK+ +YVCG+T YD CHLGHAR IVFD V R+LR Y V
Sbjct: 2 LKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +NNE+ + LT+R I+ D L+I P+Y+P T +I I
Sbjct: 62 DYVRNITDIDDKIIKRAYENNETTEQLTNRMIQEMHLDFDALNILRPNYEPKVTEHIDII 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRL----ISSNFNKINEKNNF 179
+K I LI AY NGD+ +SV NYG LS + I N KI N
Sbjct: 122 IKFICLLISKKHAYT----APNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIP---NI 174
Query: 180 KKDPLDFALWK--VSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQD 237
KK+P+DF LWK S NN P E W+S WG GRPGWHIECSAM+ + G+ DIHGGG D
Sbjct: 175 KKNPMDFVLWKKTTSYNNKPGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSD 234
Query: 238 LKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVI 297
L FPHH+NEIAQS A++ + N WMHSG + +N +KMSKS NF TIRD+LK Y+PE I
Sbjct: 235 LIFPHHDNEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETI 294
Query: 298 RFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIA 356
RFF++ +HYRS + Y++ L A+ SL RLY+A++D P I + E +FI
Sbjct: 295 RFFLMSAHYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGEYFISKFISK 354
Query: 357 MNDDFNTPVAISILFDLANIINKNKSIK--------MAKQLRGLGNWLGLLEYSSDEFLK 408
MNDDFNTP A S+LFD+A+ +N N IK MA L+ L N +GLL + + FLK
Sbjct: 355 MNDDFNTPEAYSVLFDIAHRLN-NLKIKGHSPLAQGMAATLKYLANIIGLLHQNPEIFLK 413
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
K N N I+ I R ARK + AD IR++L GI LED P G T+
Sbjct: 414 K---ITLKNNTNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITK 470
Query: 469 WR 470
W
Sbjct: 471 WH 472
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 301/491 (61%), Gaps = 39/491 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LR+YN+ + K+ F PI PGKV +YVCG+T YD+CH+GHAR +VFD++ R+L+ +V
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGLEV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN TDIDDKII A ++ ++ RFIK D L ++ P +QP AT ++P+I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDSDMARLMLRIPTFQPKATEHVPEI 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AYQ+ + DV Y V F Y KLS R L E ++ K+
Sbjct: 123 IALVQKLIDKGFAYQSGS-----DVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDKKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK +K +PY W S WG GRPGWHIECSAMS LG DIHGGG+DL FPH
Sbjct: 178 PMDFALWKGAKPGEPY---WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A FV YW+H+GFV IN +KMSKS GNF TI+++L++Y+ EV+RFF+L
Sbjct: 235 HENEIAQSEAASGKPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLERYDAEVLRFFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI--------NYKKIIDLNE---PHAK 351
+HYRS I++S+ L A+ L R+Y A+ I + ++ +L E A
Sbjct: 295 SAHYRSPIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAELEEKCSAIAT 354
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINKNKSI-------KMAKQLRGLGNWLGLLEYSSD 404
RFI AM+DDFNT +A+ +FDL IN+ + ++ +++ + LG+ +
Sbjct: 355 RFIEAMDDDFNTAMALGHIFDLVRSINRALPVSPLELLKRVKEEVARIAATLGVCDSVPA 414
Query: 405 EFLKNNIYTERKKNVNYSENDIKLK-----IYFRSEARKRKNFLEADKIRQELVNNGIIL 459
FL +R K+ SE +I ++ I R+EAR+ KNF +D+IR L+ I+L
Sbjct: 415 AFL------QRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEKDIVL 468
Query: 460 EDMPNGKTEWR 470
D P G T W+
Sbjct: 469 LDTPQGTT-WK 478
>gi|82543006|ref|YP_406953.1| cysteinyl-tRNA synthetase [Shigella boydii Sb227]
gi|109894937|sp|Q324Y3.1|SYC_SHIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|81244417|gb|ABB65125.1| cysteine tRNA synthetase [Shigella boydii Sb227]
Length = 439
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 280/450 (62%), Gaps = 30/450 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNN 178
+++ E+LI G AY +NG DV + V YG LS + + + + +++K N
Sbjct: 122 IELTEQLIAKGHAYVADNG----DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN 177
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL
Sbjct: 178 ----PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R
Sbjct: 231 MFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ HYRS +NYSE L + +L RLY A++ K E RFI AM+
Sbjct: 291 YFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPA---GGEAFEARFIEAMD 347
Query: 359 DDFNTPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
DDFNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 348 DDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQ 407
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNF 442
+ + +I+ I R +ARK K++
Sbjct: 408 ADDSEVA-----EIEALIQQRLDARKAKDW 432
>gi|311280587|ref|YP_003942818.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308749782|gb|ADO49534.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 461
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/475 (46%), Positives = 293/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E L R I +D L+I PD +P AT++IP+I
Sbjct: 62 KYVRNITDIDDKIIKRANENGEDFVGLVDRMIIEMHKDFDALNILRPDNEPRATHHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV +SV + YG+LS + L + + K++
Sbjct: 122 IEITERLIERGHAYVADNG----DVMFSVPSDPTYGELSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WG GRPGWHIECSAM+C LGSHFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKAGEPA---WASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VN WMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ + E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR---GTDASAAAAGGEAFEARFREAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFD+A +N+ K MA LR L LGLLE + FL+ +
Sbjct: 352 TPEAYSVLFDMAREVNRLKGEDAQAASAMAAHLRKLSGVLGLLEQDPETFLQGGAQADDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ +I+ I R +ARK K++ AD R L GI+LED P G T WRR
Sbjct: 412 EVA-----EIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 460
>gi|374263848|ref|ZP_09622394.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
gi|363535691|gb|EHL29139.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
Length = 412
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/436 (49%), Positives = 282/436 (64%), Gaps = 35/436 (8%)
Query: 46 MIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLL 105
M+ FD++ R+LR YDVT+VRNITDIDDKIIA A + I LT+ +I A ED L
Sbjct: 1 MVCFDVIVRYLRSQGYDVTFVRNITDIDDKIIARANERGIPIDELTAHYIDAMHEDMRAL 60
Query: 106 HIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS--- 162
+I PP+Y+P AT +I I+++IE+L+ G AY ++NG DV Y V +F YGKLS
Sbjct: 61 NILPPNYEPRATEHIATIIRLIERLLARGNAYVSDNG----DVCYQVDSFAEYGKLSHKD 116
Query: 163 --GRLISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAM 220
G + + + EK + PLDF LWK +K +PY W S WG GRPGWHIECSAM
Sbjct: 117 LEGLMSGARVEVVKEK----RSPLDFVLWKKAKPGEPY---WASPWGNGRPGWHIECSAM 169
Query: 221 SCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFG 280
+ LG HFDIHGGG DL+FPHHENEIAQSE A F NYW+H G +++NN+KMSKS G
Sbjct: 170 AIEELGEHFDIHGGGLDLQFPHHENEIAQSEAATHKPFANYWLHVGMLQVNNEKMSKSLG 229
Query: 281 NFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIP-KINY 339
NF TI D+L K++PEV+R+F+L SHYRS++NYSE L AKK+L RLY +KD P +N
Sbjct: 230 NFFTIADVLAKHHPEVVRYFLLSSHYRSSLNYSEENLFNAKKALTRLYQTMKDSPVTVNG 289
Query: 340 KKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLL 399
+L+ F AMNDDFN+PVA+S+LF L++ +NKN + +A L+ L +GLL
Sbjct: 290 ----ELDNHWINEFNKAMNDDFNSPVALSVLFQLSHEVNKNGTPVLATTLKHLAGLMGLL 345
Query: 400 EYSSDEFLKNNIYTERKKNVNYSEND---IKLKIYFRSEARKRKNFLEADKIRQELVNNG 456
+ S EFL+ + E+D I+ I R +AR +N+ AD+IR EL+N G
Sbjct: 346 QSDSAEFLQ----------AGFDEDDKAAIEQLIAERLQARADRNWERADQIRAELLNQG 395
Query: 457 IILEDMPNGKTEWRRI 472
I LED G T WR+I
Sbjct: 396 IELEDGAKGTT-WRKI 410
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/486 (44%), Positives = 292/486 (60%), Gaps = 29/486 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LR+YN+ + K+ F PI PGKV +YVCG+T YD+CH+GHAR +VFD++ R LR +V
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGLEV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN TDIDDKII A ++ ++ RFIK D L +Q P +QP AT +IP+I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEI 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++ LI G AYQ+ + DV Y V F Y KLS R L + + K+
Sbjct: 123 IALVQTLIDKGFAYQSGS-----DVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK +K +PY W S WG GRPGWHIECSAMS LG DIHGGG+DL FPH
Sbjct: 178 PMDFALWKGAKPGEPY---WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A FV YW+H+GFV IN++KMSKS GNF TI+++L+ Y+ EV+RFF+L
Sbjct: 235 HENEIAQSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-----------PKINYKKIIDLNEPHAK 351
+HYRS I++S+ L A+ L R+Y A+ I + + ++ A
Sbjct: 295 SAHYRSPIDFSDQNLKEAELGLERIYKALAGIYERLASGANTPAGADNAEFVEKVAGFAG 354
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINK---NKSIKMAKQLRG----LGNWLGLLEYSSD 404
RF AM+DDFNT +A+ LFDL +IN+ S + +Q + + LG+ +
Sbjct: 355 RFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEQAKAEVAKMAAVLGICDSVPA 414
Query: 405 EFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPN 464
FL+ + + ++ S +I+ I R+EARK KNF D+IR L+ I+L D
Sbjct: 415 AFLQ-RMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQ 473
Query: 465 GKTEWR 470
G T W+
Sbjct: 474 GTT-WK 478
>gi|410630804|ref|ZP_11341491.1| cysteinyl-tRNA synthetase [Glaciecola arctica BSs20135]
gi|410149770|dbj|GAC18358.1| cysteinyl-tRNA synthetase [Glaciecola arctica BSs20135]
Length = 459
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/474 (44%), Positives = 300/474 (63%), Gaps = 23/474 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F P+ GKV LYVCGIT YD CH+GHAR + FD++ R++R +V
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSRGLEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII+ A + + + T + I ED + + PD +P T ++P+I
Sbjct: 62 KYVRNITDVDDKIISRANEQGLTPEQFTEKTIGRMHEDFAAIGLLEPDVEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR--LISSNFNKINEKNNFKK 181
+ +I++LI G AYQ +GDV + V + YGKL GR L N E + K+
Sbjct: 122 INVIQRLIDKGYAYQ----APSGDVLFEVNTYAEYGKL-GRQDLEQLNSGARVEVVDEKR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DPLDF LWK K +P+ W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FP
Sbjct: 177 DPLDFVLWKSVKPGEPF---WESPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDLIFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENE+AQS A+ +VNYW+H+G V++N +KMSKS GNF T+RD+L Y+ E +R+F+
Sbjct: 234 HHENEVAQSCCAFDTPYVNYWVHTGMVQVNQEKMSKSLGNFFTLRDVLDVYDAETVRYFL 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAMNDD 360
+ + YRS ++YS+ ++ A+ L RLY +++D+ P +N I + + + RF AM+DD
Sbjct: 294 MSAQYRSQLSYSDSFIQQARSGLERLYTSLRDVTPNMNVD--IAMGD-YQTRFNHAMDDD 350
Query: 361 FNTPVAISILFDLANIINKN---KSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKK 417
FNTP A ++LFDLA INK+ ++ +A + L + LG+L+ + +EFL++ E +
Sbjct: 351 FNTPEAFAVLFDLAKEINKSTGQQAADLAGVMIKLADILGILQQAPNEFLQSAAGGE-QD 409
Query: 418 NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V E IK R++AR K++ AD R L I+LED NG T WRR
Sbjct: 410 DVAQIEGLIKA----RNDARASKDWAAADSARDALNALNIVLEDNENGTT-WRR 458
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/484 (45%), Positives = 285/484 (58%), Gaps = 28/484 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TLRI+N+ + K+ F P++PGKV +YVCG+T YDY H+GHAR IVFD + R+L+ YD
Sbjct: 2 TLRIFNTLTGNKEEFVPLSPGKVRMYVCGVTVYDYSHVGHARAAIVFDTLYRYLKHAGYD 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TDIDDKII A++ N + +T ++I A ED L+++ P +P AT +I
Sbjct: 62 VTYVRNFTDIDDKIINRAREQNVPWQEVTHKYIDAFYEDMDALNVERPTTEPLATEHIGD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKK 181
++KMIE L+ G AY GDV YSV+ F YG+LS R I E KK
Sbjct: 122 MIKMIEGLVKAGKAY-----PAEGDVYYSVKAFPEYGRLSKRNIEDMQAGARVEPGEHKK 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
DP+DFALWK SK P E W+S WG GRPGWHIECSAMS LLG FDIHGGG+DL FP
Sbjct: 177 DPMDFALWKKSK---PGEPAWDSPWGPGRPGWHIECSAMSYQLLGETFDIHGGGKDLVFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS G V YW+H+GFV IN +KMSKS GNF TIRD+LK ++PEV+R F+
Sbjct: 234 HHENEIAQSCGFTGKPPVRYWVHNGFVNINKEKMSKSLGNFFTIRDILKTFHPEVLRLFL 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE---------PHAKR 352
L +HYR I++S+ YL A+K+L R Y + E P K+
Sbjct: 294 LTNHYRGPIDFSDQYLKDAEKNLDRFYEFFAQAESAQGSRNGGAAEIAEDTLRSQPLLKK 353
Query: 353 FIIAMNDDFNTPVAISILFDLANIINK---------NKSIKMAKQLRGLGNWLGLLEYSS 403
F AM+DDFNT VA++ + + +NK + + A LR G LGL Y +
Sbjct: 354 FDEAMDDDFNTAVALADMMEELRRLNKQLGEEGTDRDAFHRDAATLRHAGQLLGLF-YRT 412
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
E K I + + I+ I R AR K+F AD+ R EL G++L+D
Sbjct: 413 PEEYKTEIRALKGGGQDLDVARIEQLIAERQAARSSKDFATADRCRDELQKMGVVLKDTK 472
Query: 464 NGKT 467
G T
Sbjct: 473 TGTT 476
>gi|152979432|ref|YP_001345061.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
gi|187629819|sp|A6VQ79.1|SYC_ACTSZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150841155|gb|ABR75126.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
Length = 459
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/476 (44%), Positives = 295/476 (61%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI +V +YVCG+T YD CH GH R + FD++ R+LR Y++
Sbjct: 2 LKIFNTLTREKEEFKPINQNQVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRFLGYNL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A +NNE+ L R I +D L+I PD +P AT +IP+I
Sbjct: 62 RYVRNITDVDDKIIKRALENNETCDQLVERMIAEMHKDFDALNILRPDAEPRATKHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ M++ L+ G AY +GDV + V +F YG LS + L E + KK+
Sbjct: 122 IAMVDALLQRGHAYL----AADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKSVKKN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK N+P W+S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKPNEP---SWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYW+H+G + IN +KMSKS NF TIRD+L KY+ E +R+F L
Sbjct: 235 HENEIAQSCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILTKYDAESVRYFFL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
+ YRS ++YSE + A+K+L RLY A++ ++ + + + F AM+DDFN
Sbjct: 295 TAQYRSLLDYSEENIGLARKALERLYTALR---GCDWNSELPAQDQYVGAFKDAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+++LF+LA INK K+ +A +L+ L LGLLE + FL+ E
Sbjct: 352 TPGALAVLFELAREINKLKAENPAQANHLAARLKHLAGVLGLLEQDPEAFLQGGAENEEV 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ I R++AR KN+ AD R L G++LED NG T WR++
Sbjct: 412 -------GKIEALIKQRNDARAEKNWAAADAARDALKEMGVVLEDGANG-TSWRKL 459
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/496 (43%), Positives = 286/496 (57%), Gaps = 48/496 (9%)
Query: 6 IYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTY 65
I+N+ + +K+ F P+T V +YVCGIT YDYCH+GHAR ++VFD++ R+LR YDVT+
Sbjct: 5 IHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRYDVTF 64
Query: 66 VRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILK 125
VRN TDIDDKII A + S + L+ RFI+A ED L +PP +P AT ++P+++
Sbjct: 65 VRNFTDIDDKIIKRAAEQQTSCQELSQRFIQAFHEDMAALGTEPPTLEPKATEHLPEMIA 124
Query: 126 MIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKDPL 184
+IE+LI GLAY GDV + VRNF YGKLS R + + N K+DPL
Sbjct: 125 LIEELIAKGLAY-----PAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNELKEDPL 179
Query: 185 DFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHE 244
DF LWK SK P E W S WG GRPGWHIECSAM LG FDIHGGG+DL FPHHE
Sbjct: 180 DFVLWKGSK---PEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPHHE 236
Query: 245 NEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRS 304
NEIAQSEGA F N+W+H GFV I ++KM+KS GNF TIRD+LK+Y EV+R + +
Sbjct: 237 NEIAQSEGATGKPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVLKQYPAEVLRLLLFST 296
Query: 305 HYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFII--------- 355
HYR+ ++YSE + A+ +L RLY A+ + K+ P A I
Sbjct: 297 HYRNPVDYSEAAMADAETALSRLYAALAAVGKLPAG-----GAPEATSVITAKDRQKLDN 351
Query: 356 -------AMNDDFNTPVAISILFDLANIINKNKSI--------------KMAKQLRGLGN 394
AM+ DFN+ A+ FD IINK + A +LR LG
Sbjct: 352 LESDFHQAMDIDFNSAKALGRFFDTVKIINKVRQALPATPATRDLELLRDSAAKLRELGG 411
Query: 395 WLGLLEYSSDEFLKNNIYTER-KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELV 453
GLL+ +L ER ++ + +I+ + R AR+ ++ EAD+IR L
Sbjct: 412 IFGLLQEDPAAYLARR--QERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRIRDLLA 469
Query: 454 NNGIILEDMPNGKTEW 469
I ++D P+G T W
Sbjct: 470 AKKIAIKDGPDG-TSW 484
>gi|307154328|ref|YP_003889712.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306984556|gb|ADN16437.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 480
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/496 (42%), Positives = 288/496 (58%), Gaps = 44/496 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
TL IYN+ +R+K+ F PI PGKV +Y CGIT YDYCHLGHAR +V+D+V+R+L+ Y
Sbjct: 2 TLTIYNTLTRRKEPFQPIEPGKVRMYCCGITVYDYCHLGHARTCVVWDVVRRYLQWRGYQ 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V Y++N TDIDDKI+ AKK S++ ++ RFIKA ED LHI+ D P AT+ +
Sbjct: 62 VKYIQNFTDIDDKILNRAKKEGTSMEEVSERFIKAYFEDMDRLHIEKADAYPRATHTLDG 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI-------SSNFNKINE 175
I +++ +L G AY +GDV YSVR F +YGKLSGR + S +
Sbjct: 122 IKRLVYELEQKGYAY-----AADGDVYYSVRRFADYGKLSGRKLEDLQAGASGRVELEDP 176
Query: 176 KNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGG 235
+ KKDP DFALWK +K +P W S WG GRPGWHIECSAM LG DIH GG
Sbjct: 177 ETQKKKDPFDFALWKAAKAGEP---SWESPWGEGRPGWHIECSAMVRERLGETIDIHVGG 233
Query: 236 QDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPE 295
DL FPHHENEIAQSE A YWMH+G VK+ KMSKS GNF TIRDLL K P
Sbjct: 234 SDLIFPHHENEIAQSEAATGQPLARYWMHNGMVKVGGDKMSKSLGNFTTIRDLLDKVEPM 293
Query: 296 VIRFFILRSHYRSTINYSEIYLNYAKKSLIRLY------------LAIKDIPKINYKKII 343
V+R FIL++HYR+ ++++E ++ A L LA D+P +++
Sbjct: 294 VVRLFILQTHYRNPVDFTEKAIDAASNGWQTLQEGLLFGHHYGEKLAWDDLPGATVPELV 353
Query: 344 DLNEPHAKRFIIAMNDDFNTPVAISILFDLAN--------IINKNKSIKMAKQLRGLGNW 395
+++ ++DDFN +++LF+LA ++++ K+ ++L+ W
Sbjct: 354 -------QKYREIVDDDFNFAGGLAVLFELAKELRKEGNILVHQGKTDTSPEKLK--AQW 404
Query: 396 LGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNN 455
L+E S L+ ++ S+ DI+ I R++ARK KNF E D+IR EL N
Sbjct: 405 QTLVELSQVLGLEAIAAQPEQETTGLSDADIEALIEQRAQARKAKNFAEGDRIRDELKAN 464
Query: 456 GIILEDMPNGKTEWRR 471
GI L D G T+W R
Sbjct: 465 GITLIDAGGGVTKWHR 480
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/502 (42%), Positives = 303/502 (60%), Gaps = 49/502 (9%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ SRKK+IF P GKV +YVCG+TAYD+ H+GHAR + FDI+ R+L+ YDV
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN TD+DDKIIA A + E+ +L+ RF +D LH PP +P ++++PQI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ MI++++ NG AY ++GDV +SV F +YG+LSGR + N + E+ ++ K
Sbjct: 204 IDMIKQIVDNGFAY-----GVDGDVYFSVEKFPDYGRLSGRKLEDN--RAGERVAIDSRK 256
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P DFALWK +K +P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 257 RNPADFALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMF 313
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEI QS A + YW+H+GFV IN++KMSKS GNF TIR +++ Y+P +R F
Sbjct: 314 PHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLF 373
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKD----------------IPKINYKKIID 344
++ +HYRS INYS++ L A + + +Y ++D IP+ I D
Sbjct: 374 LMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCIND 433
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN--------KNKSIK------MAKQLR 390
L F+I+M+DD +TPV ++ L D IN K + ++ + K ++
Sbjct: 434 LQ----NSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAALEKTIK 489
Query: 391 GLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
+ LGL+ S E L + + + K V +SE +++ KI R ARK K + ++D IR+
Sbjct: 490 HVLTALGLMPSSYSEAL-HQLREKALKRVKFSETEVQQKIEERDMARKNKEYEKSDAIRK 548
Query: 451 ELVNNGIILEDMPNGKTEWRRI 472
EL GI L D P G T WR +
Sbjct: 549 ELAAVGIALMDSPEGTT-WRPV 569
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 298/493 (60%), Gaps = 33/493 (6%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
MST+R+YN+ +RKK+ F P+ PGKV +YVCG+T Y++ H+G+AR +V+D++ R+L
Sbjct: 1 MSTIRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEG 60
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVT+V+N TD+DDKII A K + + +R+IKA E LH++ P +++I
Sbjct: 61 YDVTHVQNFTDVDDKIIREANKEGVTWDVIANRYIKAYFEVMDKLHVRRAHVYPRVSDHI 120
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNF 179
P I+ +++LI +G Y ++GDV Y V F +YG+LSGR + + +
Sbjct: 121 PDIIHTVQQLIDHGYGYV-----VDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDER 175
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DFALWK +K +P W+S WG GRPGWHIECS MS LGS FD HGGG DL
Sbjct: 176 KENPMDFALWKSAKPGEP---SWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLI 232
Query: 240 FPHHENEIAQSEGAY-KHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEGA H FV YW+H+GF+ IN +KMSKS GNF T+ D+LK+Y PEV+R
Sbjct: 233 FPHHENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLR 292
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH--------- 349
+FIL++HYRS +++S+ L A +SL RL A +++ ++ K +I +
Sbjct: 293 YFILQTHYRSPLDFSDARLKEASRSLERLRTAAQNLTEL--KGVISVGPDEDSLALREKV 350
Query: 350 ---AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF 406
+ F+ AM DDFNT +AIS LF L IN M + G + +++ + E
Sbjct: 351 SGFVESFLEAMRDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDKAWKEM 410
Query: 407 LK--------NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
TE K+ + I+ I R EARK K+F +AD IR EL GI+
Sbjct: 411 TSIIGILEEDPGAKTEAVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQKGIL 470
Query: 459 LEDMPNGKTEWRR 471
LED P G W+R
Sbjct: 471 LEDTPQG-VRWKR 482
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/502 (42%), Positives = 303/502 (60%), Gaps = 49/502 (9%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ SRKK+IF P GKV +YVCG+TAYD+ H+GHAR + FDI+ R+L+ YDV
Sbjct: 84 LWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYLGYDV 143
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN TD+DDKIIA A + E+ +L+ RF +D LH PP +P ++++PQI
Sbjct: 144 CYVRNFTDVDDKIIARANEVGENPISLSRRFCDEFHQDMSYLHCLPPSVEPRVSDHMPQI 203
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NNFK 180
+ MI++++ NG AY ++GDV +SV F +YG+LSGR + N + E+ ++ K
Sbjct: 204 IDMIKQIVDNGFAY-----GVDGDVYFSVEKFPDYGRLSGRKLEDN--RAGERVAIDSRK 256
Query: 181 KDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKF 240
++P DFALWK +K +P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 257 RNPADFALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDLMF 313
Query: 241 PHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFF 300
PHHENEI QS A + YW+H+GFV IN++KMSKS GNF TIR +++ Y+P +R F
Sbjct: 314 PHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIELYHPLALRLF 373
Query: 301 ILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKD----------------IPKINYKKIID 344
++ +HYRS INYS++ L A + + +Y ++D IP+ I D
Sbjct: 374 LMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSIPQDIVSCIND 433
Query: 345 LNEPHAKRFIIAMNDDFNTPVAISILFDLANIIN--------KNKSIK------MAKQLR 390
L F+I+M+DD +TPV ++ L D IN K + ++ + K ++
Sbjct: 434 LQ----NSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAALEKTIK 489
Query: 391 GLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
+ LGL+ S E L + + + K V +SE +++ KI R ARK K + ++D IR+
Sbjct: 490 HVLTALGLMPSSYSEAL-HQLREKALKRVKFSETEVQQKIEERDMARKYKEYEKSDAIRK 548
Query: 451 ELVNNGIILEDMPNGKTEWRRI 472
EL GI L D P G T WR +
Sbjct: 549 ELAAVGIALMDSPEGTT-WRPV 569
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/492 (44%), Positives = 296/492 (60%), Gaps = 50/492 (10%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+R+YNS +R+K+ F PI PG+V +YVCG T Y+Y H+G+ R I+FD ++R+L Y V
Sbjct: 1 MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYRGYKV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+++N TDIDDK+I A ++K L +FI +D+ L ++ P AT YI ++
Sbjct: 61 TFIQNFTDIDDKMINKANAEGITVKELGDKFIDEYYQDADGLQVKRATINPRATEYIDEV 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
++ ++ LI G AY+ I+GDV +S + F YGKL G+ L S ++E+
Sbjct: 121 VEFVKDLIDRGFAYE-----IDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDER--- 172
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
KKDP+DFA+WK K P E W S WG GRPGWHIECS M+ LLG DIHGGG DLK
Sbjct: 173 KKDPMDFAVWKSQK---PGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLK 229
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE KF NYWMH+ FV ++NKKMSKS NF T R+ LKKYN +VIRF
Sbjct: 230 FPHHENEIAQSEAVTGQKFANYWMHAAFVNVDNKKMSKSENNFVTAREALKKYNSDVIRF 289
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKD----IPKINYKKIIDLN-------EP 348
+L HYR+ IN+S L+ AK S+ RLY + + I ++N K+ D +
Sbjct: 290 LMLSGHYRTQINFSAELLDSAKSSVERLYNCVNNLENLINEVNRKEANDSEKAYLKSLDK 349
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQL--------RGLGNWLGLLE 400
H ++FI M+DDFNT IS++FDL IN N SI + +L R LG+ LG+L+
Sbjct: 350 HREKFIEKMDDDFNTADGISVIFDLIKDINNNVSIDSSSELCEGTLNLIRELGSPLGILQ 409
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
+ ++ L E +I+ I R EARK ++F ADKIR +L IILE
Sbjct: 410 KTEEKSL---------------EVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILE 454
Query: 461 DMPNGKTEWRRI 472
D P G W++I
Sbjct: 455 DTPQG-VRWKKI 465
>gi|444335137|ref|ZP_21150465.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443549406|gb|ELT58237.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 435
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/452 (48%), Positives = 288/452 (63%), Gaps = 25/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GH R + FD++ R+LR YD+TYVRNITD+DDKII A +N E+
Sbjct: 1 MYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDLTYVRNITDVDDKIIKRALENKET 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
L R + +D L+I PD++P AT++IP+I+ ++EKLI G AY +NG
Sbjct: 61 CDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + V +F +YGKLS + L E N KK+P+DF LWK+SK N+P W+S
Sbjct: 117 DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP---SWDSP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+ LG HFDIHGGG DL FPHHENEIAQS A+ +++VNYW+HS
Sbjct: 174 WGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L +HYRS +NYSE LN A +L
Sbjct: 234 GMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY A++ I K + E F AM+DDFNTP A+S+LF++A +NK K+ M
Sbjct: 294 RLYTALRGIDK---SAVAFGGENFVDAFREAMDDDFNTPNALSVLFEMARELNKLKTEDM 350
Query: 386 AK------QLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
AK +LR L LGLL+ ++FL+ + I+ I R+EAR
Sbjct: 351 AKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEVAK-------IEALIKQRNEARTA 403
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ AD R L GIILED PNG T WR+
Sbjct: 404 KDWAAADAARNALTKMGIILEDGPNGTT-WRK 434
>gi|320538832|ref|ZP_08038508.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
gi|320030992|gb|EFW12995.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
Length = 461
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/476 (46%), Positives = 291/476 (61%), Gaps = 25/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SR+K+ F PI GKV +YVCG+T YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLSRQKEEFKPIDAGKVGMYVCGVTLYDLCHIGHGRTFVAFDVVARYLRYLGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII + +N E+ LT R + D L I+ PD +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIIRRSAENAETCDQLTERMLAEMHADFDSLLIERPDQEPRATQHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ + ++LI AY +NG DV +S+ + YG LS + + E ++ K +
Sbjct: 122 IAITQRLIDRNHAYVASNG----DVMFSIDSDPQYGLLSHQALEQLQAGARVEIDDVKHN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK P E W S WGAGRPGWHIECSAM+C LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSK---PGEPSWQSPWGAGRPGWHIECSAMNCKQLGPHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V I+ +KMSKS NF TIRD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSSCAHDGRYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYSE L A+ +L RLY A++ D E RF AM+DDFN
Sbjct: 295 SGHYRSQLNYSEENLKQARTALERLYTALRGADADAQPMGGDAFEA---RFRQAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF+LA +N+ K + MA LR L LGLL+ ++ L+N
Sbjct: 352 TPEAYSVLFELAREVNRLKNEDRVAANGMAATLRKLAKVLGLLQQQPEQLLQNG------ 405
Query: 417 KNVNYSEN-DIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
VN E +I+ I R+EAR+ KN+ AD R L I+LED P G T WRR
Sbjct: 406 AQVNGGEGAEIEALIKQRNEARETKNWALADVARDRLNEMNIVLEDAPQGTT-WRR 460
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/486 (43%), Positives = 292/486 (60%), Gaps = 29/486 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
LR+YN+ + K+ F PI PGKV +YVCG+T YD+CH+GHAR +VFD++ R L +V
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGLEV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRN TDIDDKII A ++ + ++ RFIK D L +Q P +QP AT +IP+I
Sbjct: 63 TYVRNYTDIDDKIINRANRDGVAYNEISERFIKEFDNDMARLMLQLPTFQPKATEHIPEI 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +++KLI G AYQ+ + DV Y V F Y KLS R L + + K+
Sbjct: 123 INLVQKLIDKGFAYQSGS-----DVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDERKEH 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DFALWK +K +PY W S WG GRPGWHIECSAMS LG DIHGGG+DL FPH
Sbjct: 178 PMDFALWKGAKPGEPY---WESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A FV YW+H+GFV IN++KMSKS GNF TI+++L+ Y+ EV+RFF+L
Sbjct: 235 HENEIAQSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILESYDAEVLRFFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPK-----------INYKKIIDLNEPHAK 351
+HYRS I++S+ L A+ L R+Y A+ I + + + + A
Sbjct: 295 SAHYRSPIDFSDQNLKEAELGLERIYKALAGIDERLASGAHTPADADNTEFAEKVAGFAG 354
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINKNKSI-------KMAKQLRGLGNWLGLLEYSSD 404
RF AM+DDFNT +A+ LFDL +IN+ K+ ++ + LG+ +
Sbjct: 355 RFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEKVKAEVAKMAAVLGICDSVPA 414
Query: 405 EFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPN 464
FL+ + + ++ S +I+ I R+EARK KNF D+IR L+ I+L D
Sbjct: 415 AFLQ-RMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQ 473
Query: 465 GKTEWR 470
G T W+
Sbjct: 474 GTT-WK 478
>gi|410628124|ref|ZP_11338853.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
gi|410152346|dbj|GAC25622.1| cysteinyl-tRNA synthetase [Glaciecola mesophila KMM 241]
Length = 464
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/479 (45%), Positives = 307/479 (64%), Gaps = 28/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR YDV
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT R I ED + + PD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSALTERTIAMMHEDFAAIGLLEPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI G AYQ +G DV + V ++ +YGKLS + L N + ++ K D
Sbjct: 122 VAIIERLIQRGHAYQAKSG----DVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK K P E W+S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTVK---PGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+L++++ E +R+F++
Sbjct: 235 HENEVAQSCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFIIAMNDDF 361
+HYRS ++YSE + A+ +L RLY +++D+ K N + +D+ + RF AM+DDF
Sbjct: 295 SAHYRSQLSYSENNITQARSALERLYTSLRDV-KANTR--VDMQSTDYLTRFDKAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNKSIKMAKQLRG---------LGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LFD+A +N+ K+ A R LG LG+L+ S E+L+
Sbjct: 352 NTPEAMAVLFDVAKELNRAKAEGEAGHERASDLAGVLINLGKVLGILQRSPSEYLQG--- 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E++ + +E I+ I R++AR K++ AD R L IILED P+G T WR+
Sbjct: 409 -EQQDDDEVAE--IEGLIKARNDARAAKDWAAADAARDALNALNIILEDGPSGTT-WRK 463
>gi|407700517|ref|YP_006825304.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
gi|407249664|gb|AFT78849.1| cysteinyl-tRNA ligase [Alteromonas macleodii str. 'Black Sea 11']
Length = 460
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/475 (45%), Positives = 298/475 (62%), Gaps = 24/475 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K F P+ GKV LYVCGIT YD H+GHAR + FD++ R++R DV
Sbjct: 2 LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKIIA A +N ES + LT+R I ED +++ PD +P + ++ +I
Sbjct: 62 KYVRNITDIDDKIIARANENGESFEALTARTIGMMHEDFAAINLLEPDVEPTVSGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +I++L+ G AYQ +G DV + V + +YGKLS + L E K D
Sbjct: 122 IAIIQRLMDKGYAYQAQSG----DVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K P E W S WG GRPGWHIECSAM+ LG+HFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKTTK---PGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VN WMH+G V++N++KMSKS GNF T+RD+LK+++ E +RFF++
Sbjct: 235 HENEVAQSCCAYDTPYVNVWMHTGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLN-EPHAKRFIIAMNDDF 361
+HYRS ++YS+ + AK +L RLY A++ + + DL+ + RF AMNDD
Sbjct: 295 SAHYRSQLSYSQDNITQAKAALERLYTALR---GVEVDESTDLSYGGYLTRFEAAMNDDL 351
Query: 362 NTPVAISILFDLANIINKNK-----SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
N P A S+LFD+A +N+ K + K+A L+GLG LG+L+ D +LK
Sbjct: 352 NVPEAFSVLFDVARELNRQKDNADEAGKLAAVLKGLGAILGMLQSDPDTYLKGG------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ + +I+ I R++AR K++ AD R L G++LED P G T WR+
Sbjct: 406 EGNDDEAAEIEALIKQRNDARAAKDWAAADAARDALNAKGVVLEDGPAGTT-WRK 459
>gi|145570618|gb|ABP79724.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
Length = 436
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/451 (47%), Positives = 278/451 (61%), Gaps = 25/451 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD+CH+GHAR+M+ FD+V RWLR YDVTYVRNITDIDDKII A +N E
Sbjct: 1 MYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYDVTYVRNITDIDDKIIRRASENGEP 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
+ L R I A ED L++ PD +P AT++I + MI+ LI G AY NG
Sbjct: 61 FQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGMHTMIQTLIDKGFAYAPGNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV Y V F+ YGKLS R I E + K+DPLDF LWK +K +P W+S
Sbjct: 117 DVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEP---SWDSP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECS MS LG FDIHGGG DL FPHHENEIAQSE A + N WMH+
Sbjct: 174 WGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATGKLYANAWMHA 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G V+++ +KMSKS GNF TIR++L+KY+PEV+R+ ++ SHYRS INYSE L AK +L
Sbjct: 234 GAVRVDGEKMSKSLGNFFTIREVLEKYHPEVVRYLLVSSHYRSPINYSEDSLREAKSALE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKS--- 382
R Y +K +P+ + RF AM+DDFN+P A ++LF++ +N+ +
Sbjct: 294 RFYNGLKGLPEAQPAG----GDEFVARFAAAMDDDFNSPEACAVLFEMIREVNRLREADL 349
Query: 383 ---IKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
+A +L+ L LG+L+ D FL+ V+ +E ++ I R AR
Sbjct: 350 AAAAALAARLKVLAGVLGVLQLEPDAFLQAGA----AGKVDAAE--VEALIAARLAARAE 403
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
KN+ E+D+IR +L G++LED G T WR
Sbjct: 404 KNWGESDRIRDQLTAMGVVLEDGKGGTT-WR 433
>gi|374314065|ref|YP_005060494.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
gi|363988291|gb|AEW44482.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
Length = 461
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/475 (45%), Positives = 291/475 (61%), Gaps = 23/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ SRKK+ F PI GKV++YVCG+T YD CH+GH R ++FDI+ R+LR Y +
Sbjct: 2 LKIFNTLSRKKEKFQPINAGKVNMYVCGVTLYDLCHIGHGRTFVIFDIMARYLRYIGYSL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN+TDIDDKII A +N E LT R + D L I+ P+ +P AT +I +I
Sbjct: 62 NYVRNVTDIDDKIICRALENTEDCDKLTERMLIEMHSDFDALLIERPNKEPRATQHIDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ + ++LI AY +NG D+ +S+ + YG LS + + + N+ K++
Sbjct: 122 INITQRLIDRNHAYIASNG----DIMFSINSDPRYGLLSHQALEQLQLGARVKINHVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+ G HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKLSKPGEPC---WQSPWGAGRPGWHIECSAMNYKQFGPHFDIHGGGADLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V + +KMSKS NF TIR++L YN E IR+F++
Sbjct: 235 HENEIAQSRCAHDSQYVNYWMHSGMVMVEKEKMSKSLNNFLTIRNILSYYNGETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
SHYRS +NYSE L A SL RLY+A++ +Y + E +F AM+DD N
Sbjct: 295 SSHYRSPLNYSEKNLKQANLSLERLYMALRGTDTNDYPVKGGIFE---YQFQQAMDDDLN 351
Query: 363 TPVAISILFDLANIINKNKSIKM------AKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LF++A+ IN KS M A LR L LGLL+ ++FL+ +
Sbjct: 352 TPAAYSVLFNMAHTINSLKSKNMIAANRIATTLRKLAKVLGLLQQQPEDFLQYKTQIKDS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ V E I R++ARK KN++ AD R +L IILED G T WRR
Sbjct: 412 ERVTIEE-----LIKQRNKARKNKNWIIADAARDQLKKMNIILEDSSKGTT-WRR 460
>gi|71892086|ref|YP_277816.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|109894884|sp|Q493A1.1|SYC_BLOPB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71796192|gb|AAZ40943.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 473
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 299/481 (62%), Gaps = 25/481 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ ++KK+ F PI GK+ +YVCG+T YD CHLGHAR IVFD V R+LR Y V
Sbjct: 2 LKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
+YVRNITDIDDKII A +NNE+ + LT+R I+ D L+I P+Y+P T +I I
Sbjct: 62 SYVRNITDIDDKIIKRAYENNETTQQLTNRMIQEMHLDLDALNILRPNYEPKVTEHIDII 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRL----ISSNFNKINEKNNF 179
+K I LI AY NGD+ +SV NYG LS + I N KI N
Sbjct: 122 IKFICLLISKKHAYT----APNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIP---NI 174
Query: 180 KKDPLDFALWK-VSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P+DF LWK + NN E W+S WG GRPGWHIECSAM+ + G+ DIHGGG DL
Sbjct: 175 KKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSDL 234
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHH+NEIAQS A++ + N WMHSG + +N +KMSKS NF TIRD+LK Y+PE IR
Sbjct: 235 IFPHHDNEIAQSVCAHETSYANIWMHSGLLLLNYEKMSKSLNNFFTIRDILKHYDPETIR 294
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKIIDLNEPHAKRFIIAM 357
FF++ +HYRS + Y++ L A+ SL RLY+A++D P I + E +FI M
Sbjct: 295 FFLMSAHYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGEYFISKFISKM 354
Query: 358 NDDFNTPVAISILFDLANIINKNKSIK--------MAKQLRGLGNWLGLLEYSSDEFLKN 409
NDDFNTP A S+LFD+A+ +N N IK MA L+ L N +GLL + + FLK
Sbjct: 355 NDDFNTPEAYSVLFDIAHRLN-NLKIKGHSLLAQGMAATLKYLANIIGLLHQNPEIFLK- 412
Query: 410 NIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEW 469
I + KN ++ + I+ I R ARK + AD IR++L GI LED P G T+W
Sbjct: 413 KITLKHNKNRHFEK--IQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPTGITKW 470
Query: 470 R 470
Sbjct: 471 H 471
>gi|392546145|ref|ZP_10293282.1| cysteinyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 459
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/479 (45%), Positives = 289/479 (60%), Gaps = 33/479 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+IY++ +R+K F PI GKV +YVCGIT YD+CH+GHAR + FD++ R+LR Y+V
Sbjct: 2 LQIYDTLTRQKTEFKPIVEGKVGMYVCGITIYDFCHVGHARTYVSFDVMNRYLRHLGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TYVRNITD+DDKII A +NNE I LT R KA ED L+I P D +P T ++ +I
Sbjct: 62 TYVRNITDVDDKIIKRAAENNEEINALTVRMTKAMHEDFEALNILPADIEPTVTGHMDEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
++MIE+LI G AY +NG DV + V F +YGKLS + L E K D
Sbjct: 122 IEMIERLIEKGHAYVASNG----DVLFDVSTFEDYGKLSQQDLDMLQAGARVEVAEGKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WG GRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 PLDFVLWKKAKAGEP---SWTSPWGEGRPGWHIECSAMSSKHLGELFDIHGGGSDLQFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A +VN W+H+G V++N +KMSKS GNF T+R++LK Y+ E +R+F++
Sbjct: 235 HENEIAQSCCANNGCYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLKAYDRETVRYFLI 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS +NYS+ L A+ SL R+Y A++ + + + P RF AMNDDFN
Sbjct: 295 NGHYRSQLNYSQENLEQARSSLERIYTALRGVELVETELA---GNPFVARFEAAMNDDFN 351
Query: 363 TPVAISILFDLANIIN--KNKSIKMAKQ----LRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A+ ++F+LA +N K+ K A + L L LG+ + + FL +
Sbjct: 352 TPEALPVIFELAKEVNLLKDSDAKAAGEHAFILVKLAEVLGIAQQDPEAFLHGD------ 405
Query: 417 KNVNYSENDIKLKIYFRSEARK----RKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+ D KI E RK K++ AD R L G++LED GKT WR+
Sbjct: 406 -----QDEDEVAKIEALIEQRKNARADKDWAAADAARDALTAMGVVLED-SAGKTTWRK 458
>gi|329999154|ref|ZP_08303351.1| cysteine--tRNA ligase, partial [Klebsiella sp. MS 92-3]
gi|328538407|gb|EGF64532.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
Length = 444
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 268/416 (64%), Gaps = 21/416 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI G+V +YVCGIT YD CH+GH R + FD+V R+LR Y +
Sbjct: 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYKL 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N ES L R I +D L+I PD +P AT++I +I
Sbjct: 62 KYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIAEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+++ E+LI G AY +NG DV + V NYG LS + L + + K++
Sbjct: 122 IEITEQLIAKGHAYVADNG----DVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVDVKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK+SK +P W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKMSKEGEP---SWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS A+ ++VNYWMHSG V ++ +KMSKS GNF T+RD+LK Y+ E IR+F++
Sbjct: 235 HENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETIRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPHAKRFIIAMNDD 360
HYRS +NYSE L A+ +L RLY A++ K +D E RFI AM+DD
Sbjct: 295 SGHYRSQLNYSEENLKQARSALERLYTALR-----GTDKSVDAAGGEAFEARFIEAMDDD 349
Query: 361 FNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSSDEFLKNN 410
FNTP A S+LFD+A +N+ K+ MA LR L LGLLE + FL++
Sbjct: 350 FNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/491 (43%), Positives = 289/491 (58%), Gaps = 34/491 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++N+ +R K+ F P+ P KV++YVCGITAYD CH+GHAR +VFD++ R+LR YDV
Sbjct: 1 MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRN TD+DDKII A + + R+I A ED L I D +P AT Y+ +
Sbjct: 61 TFVRNFTDVDDKIIKKAASEGATCAGIAERYIAAFYEDMDKLGILRADAEPRATEYVAAM 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
M E+LI G AY+ +G DV + VR+F +YGKLSGR I + K+D
Sbjct: 121 ADMAERLIETGHAYRTPSG----DVYFRVRSFADYGKLSGRDIEDMRAGARVAPGDEKED 176
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDFALWK SK +P W S +G GRPGWH+ECS MS LLG FDIHGGGQDL FPH
Sbjct: 177 PLDFALWKASKPGEPV---WESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFPH 233
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A +F +W+H+GFV+IN +KMSKS GNF TIRD+ K+Y PEV+RFF++
Sbjct: 234 HENEIAQSEAATGKEFCRFWVHNGFVRINTEKMSKSLGNFITIRDIYKRYLPEVLRFFLV 293
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK----------KIIDLNEPHAKR 352
SHYRS ++YS+ L+ A+K + RLY A + + + +I + H +
Sbjct: 294 ASHYRSPLDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIAEELARHEQG 353
Query: 353 FIIAMNDDFNTPVAISILFDLANIINK-------NKSIKMAKQLRGL----GNW---LGL 398
FI AM+DD NT A+ +F + + KS + A LR + W LG+
Sbjct: 354 FIAAMDDDCNTAQALGHVFGAVRLAGRLLEDKTLAKSAETADILRRILADFETWSGILGV 413
Query: 399 LEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
S EFL + + R + + + R +ARK K+F +D IR EL G+
Sbjct: 414 CGRDSREFL-DALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRDELATLGVT 472
Query: 459 LEDMPNGKTEW 469
+ D P G +W
Sbjct: 473 VMDTPTGP-QW 482
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 294/499 (58%), Gaps = 54/499 (10%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++ N+ +RKK++F P++P +V++Y CG+TAYD HLGHAR +VFD++ R+L+ ++V
Sbjct: 6 IKFQNTLTRKKEVFEPLSPPRVTMYACGVTAYDESHLGHARAAVVFDVLFRFLKFLGFEV 65
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRN TDIDDKII A + S K L R+IK+ ED L + P Y+P AT +IPQI
Sbjct: 66 IYVRNYTDIDDKIIKRAYEVGVSPKELAERYIKSYDEDMKALKVLRPTYEPKATEHIPQI 125
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNNF 179
+ +IE LI G AY + GDV +SV F YGKLSGR L + ++EK
Sbjct: 126 IALIETLIKKGFAYVAD-----GDVYFSVEKFPEYGKLSGRNLEELKAGARIAVSEK--- 177
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K+ PLDFALWK K +P W+S WG GRPGWHIECSAM+ Y LG DIHGGG DL
Sbjct: 178 KRHPLDFALWKAEKPGEP---SWDSPWGRGRPGWHIECSAMAMYYLGETIDIHGGGLDLI 234
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSE A FV YW+H+G V + +KMSKS GNF TI+ +L +++PE IR
Sbjct: 235 FPHHENEIAQSEAATGKPFVRYWLHNGMVTVGREKMSKSLGNFVTIKQMLSRHHPEAIRL 294
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI-------------NYKKIIDLN 346
F+L HYRS ++Y+E ++ +K+L LY + I K+ N KI +
Sbjct: 295 FLLSMHYRSPLDYTEKVVSDHEKALEGLYETLYLIEKLRPSSEKAPENQQKNLAKISETI 354
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIIN----------KNKSIKMAKQLRGL---- 392
+ FI A+ DD NT AI LF L +N +K+AK+ + L
Sbjct: 355 KNFENDFISALADDLNTARAIGSLFSLEKALNNLLKLCARKVAEDHLKLAKKGKTLATKL 414
Query: 393 -GNWLGLLEYSSDEFLKNNIYTERKKNV-----NYSENDIKLKIYFRSEARKRKNFLEAD 446
G+ LG+LE S + F+ ERK++ ++I+ I R EARK KNF +AD
Sbjct: 415 AGSLLGILEESPEAFI------ERKRSQALLAKGLDRDEIERLIKEREEARKAKNFEKAD 468
Query: 447 KIRQELVNNGIILEDMPNG 465
IR +L GII+ D P G
Sbjct: 469 AIRDDLAQKGIIIRDTPWG 487
>gi|410615541|ref|ZP_11326560.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
gi|410164954|dbj|GAC40449.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
Length = 459
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/476 (43%), Positives = 301/476 (63%), Gaps = 27/476 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K+ F P+ GKV LYVCGIT YD CH+GHAR + FD++ R++R +V
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSRGLEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII+ A + + T + I ED + + PD +P T +IP+I
Sbjct: 62 KYVRNITDVDDKIISRANEQGLTPDQFTEKTIARMHEDFAAIGLLEPDVEPRVTTHIPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
+ +I++LI G AYQ ++G DV + V + +YG+L GR + +++N +
Sbjct: 122 INVIQRLIDKGYAYQADSG----DVLFEVSTYADYGRL-GR---QDLDQLNSGSRVAVAA 173
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DPLDF LWK K +P+ W S WG GRPGWHIECSAM+ LG HFDIHGGG DL
Sbjct: 174 EKRDPLDFVLWKSVKPGEPF---WESPWGNGRPGWHIECSAMNHKHLGEHFDIHGGGSDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENE+AQS A+ +VNYWMH+G V++N +KMSKS GNF T+RD+L+ Y+ E +R
Sbjct: 231 TFPHHENEVAQSCCAFDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTLRDVLEVYDAETVR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMN 358
+F++ + YRS ++YS+ ++ A+ SL RLY A++D+ N + + + + RF AM+
Sbjct: 291 YFLMSAQYRSQLSYSDSFIQQARASLERLYTALRDVTP-NMDVDVSMGD-YQTRFNQAMD 348
Query: 359 DDFNTPVAISILFDLANIINKN---KSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTER 415
DDFNTP A +ILFDLA INK+ ++ +A + L + LG+L+ + ++FL+ +
Sbjct: 349 DDFNTPEAFAILFDLAKEINKSDEQQAADLAGVMIKLADILGILQQAPNDFLQGS----- 403
Query: 416 KKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
V +I+ I R++AR K++ AD R L ++LED NG T WRR
Sbjct: 404 AGGVQDDVFEIEALIKARNDARTNKDWAAADAARDALNALNVVLEDSANGTT-WRR 458
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/492 (41%), Positives = 303/492 (61%), Gaps = 35/492 (7%)
Query: 2 STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNY 61
+ L +YN+ SR K +F P GKV +YVCG+TAYD H+GHAR+ + FD++ R+L+ Y
Sbjct: 69 TELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGY 128
Query: 62 DVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIP 121
DV YVRN TD+DDKIIA A + E +L+ R+ + D + LH PP +PC ++++P
Sbjct: 129 DVCYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFHNDMVYLHCLPPSIEPCVSDHMP 188
Query: 122 QILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEK---NN 178
QI+ MI++++ NG AY +I+GDV +S+ + YGKLSGR + N + E+ ++
Sbjct: 189 QIINMIKQILDNGCAY-----RIDGDVYFSIDGYPEYGKLSGRKLEDN--RAGERVAVDS 241
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK+P DFALWK +K +P+ W S WG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 242 RKKNPADFALWKSAKEGEPF---WESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDL 298
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQS A + ++YW+H+GFV IN++KMSKS GNF TIR ++ Y+P +R
Sbjct: 299 VFPHHENEIAQSCAACRGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDLYHPLALR 358
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI------NYKK------IIDLN 346
FF+L +HYRS +NYS++ L A + + +Y + D + ++K +D
Sbjct: 359 FFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSDTLDGI 418
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIIN----KNKSIK----MAKQLRGLGNWLGL 398
+ F+ +M+DD +TPV ++ L D IIN K I+ + K +R + LGL
Sbjct: 419 NKFSDVFVTSMSDDLHTPVLLAALSDPLKIINDMLHTRKRIQSLAALEKIVRDALSVLGL 478
Query: 399 LEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGII 458
+ + E L+ + + + +E + +I R+ ARK +++ +D IR++L +GI
Sbjct: 479 MPTTYSEVLQ-QLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKDLATHGIA 537
Query: 459 LEDMPNGKTEWR 470
L D P+G T WR
Sbjct: 538 LMDSPDG-TSWR 548
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/493 (44%), Positives = 290/493 (58%), Gaps = 40/493 (8%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
++RIYN+ SR+K+I P+ G V LYVCGIT+YDYCH+GHAR +VFD+V R+LR Y
Sbjct: 2 SIRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGYK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VT+VRN TDIDDKII A + +L RFI D L PD +P AT +IP+
Sbjct: 62 VTFVRNFTDIDDKIINRANEQGIDSASLALRFINEFYTDMDALGTLRPDLEPKATEHIPE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKK 181
++ +IE LI G+AY +GDV + V F+ YG+LSGR L E N+ K+
Sbjct: 122 MIGLIEDLIDKGMAY-----PADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDKKE 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
P+DF LWK +K P E +W S WG GRPGWHIECSAMS LG FDIHGGG+DL FP
Sbjct: 177 HPMDFVLWKAAK---PGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQS GA F N WMH GFV I +KMSKS GNF TIRD+LK+Y PEV+R FI
Sbjct: 234 HHENEIAQSCGASGKPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVLKQYEPEVLRLFI 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLY---LAIKDIPKINYKK---IIDLNEPH----AK 351
+ YR+ ++++E L+ A+ L R+Y ++D+P + I D +
Sbjct: 294 FSTQYRNPLDFTETALHDARAGLERMYECLAQVEDLPAEGTEGASVITDKDRTALASLVD 353
Query: 352 RFIIAMNDDFNTPVAISILFDLANIINK--------------NKSIKMAKQLRGLGNWLG 397
RF AM++DFNT A++ LFD ++NK N A + R L LG
Sbjct: 354 RFHQAMDNDFNTAQALAHLFDTVKLLNKVLRTLPERPAAADLNLLRTTAAEFRELAGVLG 413
Query: 398 LLEYSSDEFLKNNIYTERKK---NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVN 454
L++ + E + N R K ++ E I I R++AR K++ +D++R L+
Sbjct: 414 LVQRNPAEVVAGN----RAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVRDYLLE 469
Query: 455 NGIILEDMPNGKT 467
+ I+L+D P G T
Sbjct: 470 HRIVLKDSPEGTT 482
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/498 (44%), Positives = 296/498 (59%), Gaps = 48/498 (9%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
T+RI+N+ S KK+ + PG V LYVCGIT+YDYCH+GHAR + FD++ +L+ +
Sbjct: 2 TMRIHNTLSGKKETLQTLEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLKFRGHK 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
VTYVRN TDIDDKIIA A + S + L +RFI+ D L I PD +P AT +I +
Sbjct: 62 VTYVRNFTDIDDKIIARAAEQQTSAEELAARFIREFYVDMDKLGINRPDIEPKATEHISE 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR----LISSNFNKINEKNN 178
++ +IE+LI G AY + N DV Y V +F +YGKLS R + + INE+
Sbjct: 122 MIALIEELISKGKAYPSGN-----DVYYIVDSFPDYGKLSKRNVEDMQAGARISINEQ-- 174
Query: 179 FKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K++PLDF LWK SK P E W S WG GRPGWHIECSAMS LG FDIHGGGQDL
Sbjct: 175 -KRNPLDFVLWKGSK---PGEPTWESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQDL 230
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIR 298
FPHHENEIAQSEG + F N W+H GFV I ++KMSKS GNF TIRD+L Y+PEV+R
Sbjct: 231 IFPHHENEIAQSEGVHGKAFANLWIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEVLR 290
Query: 299 FFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKK--------IID----LN 346
FFI +HYR+ +++SE + A L RLY + + +++ +K D L
Sbjct: 291 FFIFSTHYRNPLDFSESAMQDATAGLERLYECVAAVDRLDPQKSGANVASIFTDNDRQLL 350
Query: 347 EPHAKRFIIAMNDDFNTPVAISILFDLANIINK-NKSI-------------KMAKQLRGL 392
E RF AM++DFNT A I FD IN+ +++ K A LR L
Sbjct: 351 ESMESRFQQAMDNDFNTAQAQGIFFDTVKTINRICRALPAVPSASDVEFLKKCANNLRKL 410
Query: 393 GNWLGLLEYSSDEFL---KNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIR 449
+ +G+L ++ FL KN + +E +VN I+ I R++ R KN+ +D+IR
Sbjct: 411 ADIMGILREDAESFLAAGKNKMISEGGLDVNA----IEALIAERNQCRSAKNWARSDEIR 466
Query: 450 QELVNNGIILEDMPNGKT 467
L+ I L+D PNG T
Sbjct: 467 DLLLAQNIELKDGPNGTT 484
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/484 (44%), Positives = 291/484 (60%), Gaps = 25/484 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+R+YN+ +++K+ F P+ G+V +YVCG T YDY HLGHAR I FD+++R+L Y
Sbjct: 2 AIRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGYT 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V V N TDIDDKII A + E K L +F++ ED L ++P D P T +I
Sbjct: 62 VLMVMNFTDIDDKIIRRANETGEDPKELAEKFLRYFLEDMKALKVKPADIYPRVTEHIQD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
I+ + KL G AY+ N+G V + VR F +YGKLSG + E KK
Sbjct: 122 IIDFVRKLQEKGYAYEGNDG-----VYFEVRKFKDYGKLSGIKLEELVKGARVEPGEGKK 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P DFALWK +K +P +W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 177 NPEDFALWKKAKPGEP---KWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE H++V YW+H+GFV ++ +KMSKS GNF TIR+LL+KY+PEVIRFF+
Sbjct: 234 HHENEIAQSEACTGHEWVRYWLHTGFVMVSGEKMSKSLGNFVTIRELLQKYSPEVIRFFV 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYK------------KIIDLNEPH 349
L+ HYRS ++Y+E + +AK +L RLY +++I K ++ +
Sbjct: 294 LQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEFELYETVREA 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEF-LK 408
K+F AM+DDFNT A+ +F+++N +N+ + + L L + S+ F L
Sbjct: 354 RKKFYDAMDDDFNTAEALKAVFEVSNAVNRYLTKVEKPKESVLRKALEFFKIVSEVFGLF 413
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
+ + E+K E I+L + R+E RK++NF ADKIR EL GI LED P G T
Sbjct: 414 EDYFKEQK--AGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALGIQLEDTPQG-TI 470
Query: 469 WRRI 472
W+RI
Sbjct: 471 WKRI 474
>gi|407793853|ref|ZP_11140884.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
gi|407214007|gb|EKE83858.1| cysteinyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
Length = 465
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/481 (45%), Positives = 290/481 (60%), Gaps = 31/481 (6%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L ++N+ +R+K+ F PI G+V+LYVCG+T YD+CH+GHAR + FD+V R+LR Y V
Sbjct: 2 LTLFNTLTRQKEAFKPIHEGQVNLYVCGVTIYDFCHIGHARTYVSFDVVVRYLRAIGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITD+DDKII A ++ + I +T F A ED L++ PD +P T+++ I
Sbjct: 62 KYVRNITDVDDKIIRRANESGQQIGDITRHFAAAMHEDFAALNLLEPDVEPTVTDHMDDI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS-NFNKINEKNNFKKD 182
+ MI LI G AY +NG DV + V F +YGKLS + +S + +N K D
Sbjct: 122 IAMIAALIEKGAAYVADNG----DVLFDVSTFNDYGKLSKQDLSQLQAGARVDVDNSKAD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDF LWK +K +P W S WGAGRPGWHIECSAM+ LGSHFDIHGGG DL FPH
Sbjct: 178 PLDFVLWKPAKAGEP---SWPSPWGAGRPGWHIECSAMNKKHLGSHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS A +VNYWMHSG V++++ KMSKS GNF TIRD+L +Y+ E +R+F+L
Sbjct: 235 HENEVAQSCCANDSAYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLSQYSAETVRYFLL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIID--LNEPHAKRFIIAMNDD 360
SHYRS ++Y+ L A SL RLY ++DI + +D L + + +RF AMNDD
Sbjct: 295 SSHYRSQLSYTSDNLQQAHASLERLYGTLRDIAP---AEALDETLYDRYWQRFCQAMNDD 351
Query: 361 FNTPVAISILFDLANIINKNK------SIKMAKQLRG----LGNWLGLLEYSSDEFLKNN 410
FN P A +LF+LA + K S+ A QL L LGLL+ + + FL+
Sbjct: 352 FNVPEATPLLFELARDSQRMKQQGDAESLAQAAQLTAVMKRLAAVLGLLQQAPEAFLQGQ 411
Query: 411 IYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWR 470
I+ I R AR K++ AD R +L G++LED G T WR
Sbjct: 412 QDAAEVAR-------IEALIAQRENARANKDWAAADAARDQLTELGVVLEDGAGG-TRWR 463
Query: 471 R 471
R
Sbjct: 464 R 464
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/499 (44%), Positives = 304/499 (60%), Gaps = 51/499 (10%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
+R+YN+ S KK+ PI P V LYVCGIT+YDYCH+GHAR + FD++ R+LR +Y V
Sbjct: 3 IRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYLDYKV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRN TDIDDKIIA A + + + L RFI D L PD +P AT +I ++
Sbjct: 63 TFVRNFTDIDDKIIARANETGVTAQALAERFIDEFHTDMDNLGTLRPDIEPKATEHIQEM 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLI----SSNFNKINEKNNF 179
+ +I++L+ +AY + GDV Y V +F YGKLSGR I + INE+
Sbjct: 123 IDIIQELVDKDMAYPSA-----GDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQ--- 174
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
K++P+DFALWK SK P E W S WG GRPGWHIECSAMS LG +FDIHGGG+DL
Sbjct: 175 KRNPMDFALWKASK---PGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLI 231
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA F N W+H GFV I ++KMSKS GNF TI+D+L Y+PE++R
Sbjct: 232 FPHHENEIAQSEGANGKPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILDHYHPEILRA 291
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPK-----------INYKKIIDLNEP 348
FI + YR+ +++SEI + A+ +L+RLY + DI + I+ K LN
Sbjct: 292 FIFSTQYRNPLDFSEIAMQDAETALVRLYECLHDIQQLAKGDPTLPALISAKDAAKLNSI 351
Query: 349 HAKRFIIAMNDDFNTPVAISILFDLANIINKNK----------SIKMAKQ----LRGLGN 394
RF AMN+DFNT +A+ +L+D IIN+ + +KM K ++ L
Sbjct: 352 ET-RFQEAMNNDFNTALALGVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTLIQKLAG 410
Query: 395 WLGLLEYSSDEFLKNNIYTERKK----NVNYSENDIKLKIYFRSEARKRKNFLEADKIRQ 450
+GLL+ ++ FL+ +RK+ ++ +E +I+ I R +AR K++ +D+IR
Sbjct: 411 IVGLLQEDANLFLQ-----QRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRD 465
Query: 451 ELVNNGIILEDMPNGKTEW 469
L+ GI L+D +G T W
Sbjct: 466 ILLEKGITLKDGADG-TGW 483
>gi|42518493|ref|NP_964423.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
gi|61216256|sp|Q74L26.1|SYC_LACJO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|41582778|gb|AAS08389.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
Length = 470
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 298/492 (60%), Gaps = 47/492 (9%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++N+ +RKK+ F P+ GKVS+YVCG T Y+Y H+G+AR +I FD ++R+ YDV
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A+K + +++ L R+IKA ED+ L+I+P P AT+ I +I
Sbjct: 61 NYVSNFTDVDDKMINEARKEHTTVEKLAERYIKAFMEDTEALNIEPATLHPRATHEIKEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS----GRLISSNFNKINEKNNF 179
+ ++ LI G+AY+ ++GDV Y R F NYG+LS L INE+
Sbjct: 121 IDFVQDLIDKGVAYE-----VDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEEEQS 175
Query: 180 KK-DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK DP+DFALWK K D EI W+S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 176 KKEDPIDFALWKAQKEED--EIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNK--KMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + K KMSKS NF T+ D+LK+ +P+V
Sbjct: 234 EFPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQV 293
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKII--------DLNE 347
+RF++ YR INYSE L A+ L R ++++ ++N + DL +
Sbjct: 294 LRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLEDNGLRDDLTQ 353
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKN--------KSIKMAKQLRGLGNWLGLL 399
A+ FI AM+DDFN A+SI++DLA +N + ++K AK+L L WL +
Sbjct: 354 AKAE-FIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKL--LIAWLEIF 410
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
S E N +++I+ I R EARK K++ E+D++R EL GI++
Sbjct: 411 GVSFKEEQAEN------------DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVI 458
Query: 460 EDMPNGKTEWRR 471
ED P G T W R
Sbjct: 459 EDTPQG-TRWHR 469
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/496 (44%), Positives = 296/496 (59%), Gaps = 49/496 (9%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+RIYN+ +R+K+ F P+ G+V +YVCG T YDY HLGHAR I FD+++R+L Y
Sbjct: 2 AIRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V V N TDIDDKII A + E K L +F++ ED L ++P D P T ++
Sbjct: 62 VLMVMNFTDIDDKIIKRANETGEDPKELAEKFLRIFLEDMKALKVKPADIYPRVTEHMQD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKK 181
I+ I+KL G AY+ ++G V + VR F +YGKLS + E K+
Sbjct: 122 IISFIKKLQEKGYAYEGSDG-----VYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEGKR 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P DFALWK +K +P +W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 177 NPEDFALWKKAKPGEP---KWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQSE + H++V+YWMH+GF+ +N +KMSKS GNF T+R+LLK+YNPEVIR F+
Sbjct: 234 HHENEIAQSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELLKRYNPEVIRLFV 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDL--NEPH---------- 349
L+ HYRS ++YSE + +AK +L RLY +++I K I +EP
Sbjct: 294 LQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEFRAYEAIRDA 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINK--------NKSI--KMAKQLRGLGNWLGLL 399
K+F AM+DDFNT A+ +F+++N IN+ +SI K + + +G GL
Sbjct: 354 RKKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVEKPKESILRKAWEFFKDVGEVFGLF 413
Query: 400 EYSSDEFLKNNIYTERKKNVNYSEND---IKLKIYFRSEARKRKNFLEADKIRQELVNNG 456
E + + E+K +END I L + R++ RK K F ADKIR+EL G
Sbjct: 414 E---------DYFKEQK-----AENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLG 459
Query: 457 IILEDMPNGKTEWRRI 472
I LED P G T W+RI
Sbjct: 460 IQLEDTPQG-TVWKRI 474
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/486 (44%), Positives = 292/486 (60%), Gaps = 29/486 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L +YN+ +R+K+ F P+ KV +YVCG+T YD CHLGHAR ++ FD++ R+L +DV
Sbjct: 3 LFVYNTLTRQKEEFKPLHAPKVGMYVCGVTVYDECHLGHARALVNFDVIYRYLSFRGFDV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
T+VRN TD+DDKII A K K++ ++I D L ++PP +P AT +I ++
Sbjct: 63 TFVRNFTDVDDKIINKAIKEGSDWKSVAEKYIATFHRDVTALGLKPPTIEPKATEHIEEM 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNFKKD 182
L +I L NG AY GDV Y VR +YGKLSG+ I + E K D
Sbjct: 123 LSLIGTLEKNGFAYP-----AGGDVFYKVRQKNDYGKLSGKKIEELESGARIEILEAKTD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
PLDFALWK SK P E W S WG GRPGWHIECSAMS LG FDIHGGG+DL FPH
Sbjct: 178 PLDFALWKGSK---PGEPSWASHWGEGRPGWHIECSAMSMKYLGETFDIHGGGRDLSFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQSE A F YW+H+GFV IN +KMSKS GNF TIR++L+KY+PEV+R FIL
Sbjct: 235 HENEIAQSEAATGKLFAKYWLHNGFVNINAEKMSKSLGNFLTIREMLEKYHPEVLRLFIL 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKI--NYKKIIDLNEPHAKR-------F 353
+ YRS ++Y+E +N A++SLIR Y I K + +K D + K+ F
Sbjct: 295 AAQYRSPLDYTEANINNARQSLIRWYTTTDRIQKECRHLEKTDDGAKDLEKKVLGLMNEF 354
Query: 354 IIAMNDDFNTPVAISILFDLANIINKNKSIKMA----------KQLRGLGNWLGLLEYSS 403
AM+DDFNT ILFDL N+ K+A K + + LGL
Sbjct: 355 QEAMDDDFNTAKVTGILFDLVREWNRVLDTKLAVPQAVCEAFFKNVARISEVLGLFGAKP 414
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
++FL N+ + ++V +I+ I R+ ARK K++++AD IR+EL +G+ ++D P
Sbjct: 415 EDFL-NDDKKLQFQSVKIDAAEIEKSIADRNMARKNKDWVKADLIRKELKEHGVEIKDNP 473
Query: 464 NGKTEW 469
+G T W
Sbjct: 474 DGTTSW 479
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/496 (44%), Positives = 292/496 (58%), Gaps = 44/496 (8%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +RKK++ PI PG + LYVCGIT+YDYCH+GHAR + FD++ R+LR V
Sbjct: 3 VKIYNTLTRKKELLKPIEPGHIKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYRGNKV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
TY+RN TDIDDKIIA A++ + + L +RFI D L + P +P AT +I ++
Sbjct: 63 TYIRNFTDIDDKIIARAEEQGTTTEELANRFIDEFYVDMDRLGVDRPTMEPKATEHIQEM 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++ +LI G+AY GDV Y V +F YGKLSGR L N K D
Sbjct: 123 IDLVSELIDKGMAY-----PAGGDVYYKVHSFDGYGKLSGRNLDDMQAGARVSVNENKTD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF +WK SK P E W+S WG GRPGWHIECSAMS LGS FDIHGGGQDL FPH
Sbjct: 178 PMDFVMWKASK---PGEPSWDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQSEGA FVN W+H GFV I ++KMSKS GNF TIRD+L Y+PEV+RFFI
Sbjct: 235 HENELAQSEGANNKPFVNMWIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEVLRFFIF 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAI----------KDIPKI-----NYKKIIDLNE 347
+ YR+ +++SE + A L RLY I D +I + KKI L E
Sbjct: 295 STQYRNPLDFSEAAMQDAMTGLDRLYECIAACDALGTAHSDSAEIVATPKDIKKIESLEE 354
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINK--------------NKSIKMAKQLRGLG 393
RF AM++DFNT A + LF+ +INK N + + L
Sbjct: 355 ----RFQKAMDNDFNTAQAQASLFETVKVINKIIQQLPDVPATSDYNLLKSGSADIVKLA 410
Query: 394 NWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELV 453
+G+++ ++ E+L + + SE +I I R++AR KN+ +D+IR EL+
Sbjct: 411 AIMGIVQENAAEYLAHK-KAAMLAETDISEAEILALIAERNQARTDKNWTRSDEIRDELL 469
Query: 454 NNGIILEDMPNGKTEW 469
+ GI L+D P G T W
Sbjct: 470 DRGIELKDGPEG-TGW 484
>gi|444349739|ref|ZP_21157091.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443543976|gb|ELT54067.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 435
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/452 (47%), Positives = 287/452 (63%), Gaps = 25/452 (5%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCG+T YD CH+GH R + FD++ R+LR YD+TYVRNITD+DDKII A +N E+
Sbjct: 1 MYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYDLTYVRNITDVDDKIIKHALENKET 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
L R + +D L+I PD++P AT++IP+I+ +++KLI G AY +NG
Sbjct: 61 CDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSK 205
DV + V +F +YGKLS + L E N KK+P+DF LWK+SK N+P W+S
Sbjct: 117 DVMFDVESFKDYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEP---SWDSP 173
Query: 206 WGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHS 265
WG GRPGWHIECSAM+ LG HFDIHGGG DL FPHHENEIAQS A+ +++VNYW+HS
Sbjct: 174 WGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHS 233
Query: 266 GFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLI 325
G + ++ +KMSKS GNF TIRD+L Y+ E +R+F+L +HYRS +NYSE LN A +L
Sbjct: 234 GMIMVDKEKMSKSLGNFFTIRDVLNHYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALE 293
Query: 326 RLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKM 385
RLY A++ K + E F AM+DDFNTP A+S+LF++A +NK K+ M
Sbjct: 294 RLYTALRGTDK---SAVAFGGENFVDAFREAMDDDFNTPNALSVLFEMARELNKLKTEDM 350
Query: 386 AK------QLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKR 439
AK +LR L LGLL+ ++FL+ + I+ I R+E+R
Sbjct: 351 AKANGLAARLRELAAILGLLQLDPEQFLQAGSDEDEVAK-------IEALIKQRNESRAT 403
Query: 440 KNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
K++ AD R L GIILED PNG T WR+
Sbjct: 404 KDWAAADAARNALTEMGIILEDGPNGTT-WRK 434
>gi|227888795|ref|ZP_04006600.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
gi|227850632|gb|EEJ60718.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
Length = 472
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 297/492 (60%), Gaps = 47/492 (9%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++N+ +RKK+ F P+ GKVS+YVCG T Y+Y H+G+AR +I FD ++R+ YDV
Sbjct: 3 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV 62
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A K + +++ L R+IKA ED+ L+I+P P AT+ I +I
Sbjct: 63 NYVSNFTDVDDKMINEAHKEHTTVEKLAERYIKAFMEDTEALNIEPATLHPRATHEIKEI 122
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS----GRLISSNFNKINEKNNF 179
+ ++ LI G AY+ ++GDV Y R F NYG+LS L INE+
Sbjct: 123 IDFVQDLIDKGFAYE-----VDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEEEQS 177
Query: 180 KK-DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK DP+DFALWK K D EI W+S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 178 KKEDPIDFALWKAQKEED--EIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 235
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNK--KMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + K KMSKS NF T+ D+LK+ +P+V
Sbjct: 236 EFPHHENEIAQSEAKTGRKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQV 295
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKII--------DLNE 347
+RF++ YR INYSE L A+ L R ++++ ++N + DL +
Sbjct: 296 LRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLEDNGLRDDLTQ 355
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKN--------KSIKMAKQLRGLGNWLGLL 399
A+ FI AM+DDFN A+SI++DLA +N + ++K AK+L L WL +
Sbjct: 356 AKAE-FIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKL--LIAWLEIF 412
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
S +E N +++I+ I R EARK K++ E+D++R EL GI++
Sbjct: 413 GVSFNEEQAEN------------DDEIEKLIAQRDEARKNKDWAESDRLRAELQAKGIVI 460
Query: 460 EDMPNGKTEWRR 471
ED P G T W R
Sbjct: 461 EDTPQG-TRWHR 471
>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
Length = 464
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 309/479 (64%), Gaps = 28/479 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L IYN+ +R+K++F P+ KV LYVCGIT YD H+GHAR + FD++ R+LR Y+V
Sbjct: 2 LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYEV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A +N E+ LT R I +D + + PD +P T ++P+I
Sbjct: 62 NYVRNITDIDDKIIQRANENGETTSELTERTIAMMHDDFAAIGLLAPDIEPRVTTHMPEI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ +IE+LI G AYQ +G DV + V ++ +YGKLS + L N + ++ K D
Sbjct: 122 IAIIERLIQRGHAYQAKSG----DVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDSDKDD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K P E W S WG GRPGWHIECSAM+ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVLWKTAK---PGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENE+AQS AY +VNYW+H+G V+++++KMSKS GNF T+RD+L++++ E +R+F++
Sbjct: 235 HENEVAQSCCAYDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHDAETLRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEP-HAKRFIIAMNDDF 361
+HYRS ++YS+ + A+ +L RLY +++D+ K N + +D++ + RF AM+DDF
Sbjct: 295 SAHYRSQLSYSQSNITQARSALERLYTSLRDV-KANTQ--VDMHSADYLTRFDKAMDDDF 351
Query: 362 NTPVAISILFDLANIINKNK---------SIKMAKQLRGLGNWLGLLEYSSDEFLKNNIY 412
NTP A+++LFD+A +N+ K + +A L LG LG+L+ S E+L+
Sbjct: 352 NTPEAMAVLFDVAKELNRAKAEGQEGHERASDLAGVLINLGKVLGILQRSPSEYLQG--- 408
Query: 413 TERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
E++ + +E I+ I R++AR K++ AD R L IILED P+G T WR+
Sbjct: 409 -EQQDDDEVAE--IEGLIKARNDARAAKDWAAADAARDGLNALNIILEDGPSGTT-WRK 463
>gi|400405581|ref|YP_006588440.1| cysteinyl-tRNA synthetase [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363944|gb|AFP85012.1| cysteinyl-tRNA synthetase [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 463
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/475 (44%), Positives = 289/475 (60%), Gaps = 21/475 (4%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ +R+K+ F PI KV +YVCG+T YD CH+GH R + FD+V R+LR +DV
Sbjct: 2 LKIFNTLTRQKEEFKPIDALKVGIYVCGMTVYDLCHIGHGRTFVAFDVVIRYLRYRGFDV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDI+D II A ++ E LT+R I+A D L+I P+++P AT YI I
Sbjct: 62 NYVRNITDIEDNIIRRAAESGEPYHELTNRMIRAMHADFDKLNILRPNHEPRATQYINSI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGR-LISSNFNKINEKNNFKKD 182
+ ++ +L+ AY NGDV +SV++ YG LS + L + K++
Sbjct: 122 IALVGQLLDREHAYV----ATNGDVMFSVQSHSAYGLLSKQDLRQLQVGARVDVTEAKRN 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF +WK+SK ++P W S WGAGRPGWHIECSA++ LG HFDIHGGG DL FPH
Sbjct: 178 PMDFVMWKMSKPDEP---SWPSPWGAGRPGWHIECSAINLQQLGHHFDIHGGGSDLIFPH 234
Query: 243 HENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFIL 302
HENEIAQS AY +VN WMH+G V ++ +K+SKS NF T+RD+L Y+ E +R+F++
Sbjct: 235 HENEIAQSTCAYDGPYVNIWMHTGMVMVDREKISKSRSNFFTVRDVLHSYDAETVRYFLM 294
Query: 303 RSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFN 362
HYRS ++YSE L ++ +L RLY A++ + + E A +F AM+DDFN
Sbjct: 295 SGHYRSPLHYSEESLMQSRSALERLYTALR---GTHCATVPSYGEKFAAKFAEAMDDDFN 351
Query: 363 TPVAISILFDLANIINKNKSIK------MAKQLRGLGNWLGLLEYSSDEFLKNNIYTERK 416
TP A S+LFDLA +N+ K+ K MA LR L LGLL D FL+
Sbjct: 352 TPEAYSVLFDLAREVNRLKNTKPMVAHGMAGILRQLAGVLGLLGQDPDIFLQQRGGASGS 411
Query: 417 KNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
+V+ +I L I R+ ARK + + AD IR L GI+LED G T WRR
Sbjct: 412 PSVS---AEIALLIQKRNHARKSRQWALADDIRDRLTARGIVLEDGYEGTT-WRR 462
>gi|268318912|ref|YP_003292568.1| hypothetical protein FI9785_418 [Lactobacillus johnsonii FI9785]
gi|262397287|emb|CAX66301.1| cysS [Lactobacillus johnsonii FI9785]
Length = 470
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/492 (43%), Positives = 297/492 (60%), Gaps = 47/492 (9%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++N+ +RKK+ F P+ GKVS+YVCG T Y+Y H+G+AR +I FD ++R+ YDV
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A+K + +++ L R+IKA ED+ L+I+P P AT+ I +I
Sbjct: 61 NYVSNFTDVDDKMINEARKEHTTVEKLAERYIKAFMEDTEALNIEPATLHPRATHEIKEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS----GRLISSNFNKINEKNNF 179
+ ++ LI G AY+ ++GDV Y R F NYG+LS L INE+
Sbjct: 121 IDFVQDLIDKGFAYE-----VDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEEEQS 175
Query: 180 KK-DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK DP+DFALWK K D EI W+S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 176 KKEDPIDFALWKAQKEED--EIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNK--KMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + K KMSKS NF T+ D+LK+ +P+V
Sbjct: 234 EFPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQV 293
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI-PKINYKKII--------DLNE 347
+RF++ YR INYSE L A+ L R ++++ ++N + DL +
Sbjct: 294 LRFYMSSVQYRRPINYSEDGLKQAETILKRYQNTLRNLDARLNDENETLEDNGLRDDLTQ 353
Query: 348 PHAKRFIIAMNDDFNTPVAISILFDLANIINKN--------KSIKMAKQLRGLGNWLGLL 399
A+ FI AM+DDFN A+SI++DLA +N + ++K AK+L L WL +
Sbjct: 354 AKAE-FIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKL--LIAWLEIF 410
Query: 400 EYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIIL 459
S E N +++I+ I R EARK K++ E+D++R EL GI++
Sbjct: 411 GVSFKEEQAGN------------DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVI 458
Query: 460 EDMPNGKTEWRR 471
ED P G T W R
Sbjct: 459 EDTPQG-TRWHR 469
>gi|417836941|ref|ZP_12483181.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii pf01]
gi|338762620|gb|EGP13887.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii pf01]
Length = 470
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/495 (43%), Positives = 295/495 (59%), Gaps = 53/495 (10%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++++N+ +RKK+ F P+ GKVS+YVCG T Y+Y H+G+AR +I FD ++R+ YDV
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A+K + +++ L R+IKA ED+ L+I+P P AT+ I +I
Sbjct: 61 NYVSNFTDVDDKMINEARKEHTTVEKLAERYIKAFMEDTEALNIEPATLHPRATHEIKEI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLS----GRLISSNFNKINEKNNF 179
+ ++ LI G AY+ ++GDV Y R F NYG+LS L INE+
Sbjct: 121 IDFVQDLIDKGFAYE-----VDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEEEQS 175
Query: 180 KK-DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK DP+DFALWK K D EI W+S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 176 KKEDPIDFALWKAQKEED--EIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNK--KMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + K KMSKS NF T+ D+LK+ +P+V
Sbjct: 234 EFPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDILKQIDPQV 293
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNE--------- 347
+RF++ YR INYSE L A+ L R ++++ ++ D NE
Sbjct: 294 LRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLD----ARLDDENERLEDNGLRD 349
Query: 348 --PHAK-RFIIAMNDDFNTPVAISILFDLANIINKN--------KSIKMAKQLRGLGNWL 396
AK FI AM+DDFN A+SI++DLA +N + ++K AK+L L WL
Sbjct: 350 DLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKL--LIAWL 407
Query: 397 GLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNG 456
+ S E N +++I+ I R EARK K++ E+D++R EL G
Sbjct: 408 EIFGVSFKEEQAEN------------DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKG 455
Query: 457 IILEDMPNGKTEWRR 471
I++ED P G T W R
Sbjct: 456 IVIEDTPQG-TRWHR 469
>gi|256852089|ref|ZP_05557476.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260661341|ref|ZP_05862254.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
gi|297205036|ref|ZP_06922432.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
gi|256615501|gb|EEU20691.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260547796|gb|EEX23773.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
gi|297149614|gb|EFH29911.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
Length = 473
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/488 (43%), Positives = 293/488 (60%), Gaps = 36/488 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ PGKVS+YVCG T Y+Y H+G+AR I FD ++R+L +DV
Sbjct: 1 MKIYNTLTRQKEEFKPLVPGKVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A+ ++ L R+I A ED+ L+I+P P AT I I
Sbjct: 61 KYVSNFTDVDDKMINEARAEGITVPELAKRYINAFMEDTTALNIEPATLHPRATEEIKDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF---- 179
+ I+ LI G AY+ ++GDV Y + F YGKLS + I+S +E N
Sbjct: 121 IAFIKDLIEKGFAYE-----VDGDVYYRAKKFNGYGKLSDQDIASLEEGASEHVNEAEFA 175
Query: 180 -KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
K+DP+DFALWK K +D EI W S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 176 KKEDPIDFALWKKQKQSD--EIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKI--NNKKMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + + +KMSKS NF T+ D+LK+ +P+V
Sbjct: 234 EFPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKDEEKMSKSLHNFVTVHDILKRVDPQV 293
Query: 297 IRFFILRSHYRSTINYSE-------IYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPH 349
+RFF+ YR INYSE I L+ K +++ + ++D K + E
Sbjct: 294 LRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLQDTDSQENKALAVAIEDS 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMA-----KQ-LRGLGNWLGLLEYSS 403
RF AM+DDFN A+S+++DL IINKN S + KQ L+ L NW+ +
Sbjct: 354 ENRFKEAMDDDFNVQNALSVVYDLLPIINKNISESTSDLSNLKQFLQHLENWMAIFGV-- 411
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
+I+ + V+ +++I+ + R EARK K+F +D IR +L I+L+D P
Sbjct: 412 ------DIHKLTAEKVSDDDSEIEELVKKRDEARKHKDFATSDAIRDQLAAMNIVLQDTP 465
Query: 464 NGKTEWRR 471
G T+WRR
Sbjct: 466 KG-TKWRR 472
>gi|33519768|ref|NP_878600.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
gi|61216292|sp|Q7VRB4.1|SYC_BLOFL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33504113|emb|CAD83375.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
Length = 474
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/482 (45%), Positives = 301/482 (62%), Gaps = 26/482 (5%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
L+I+N+ ++KK+IF I G++ +YVCGIT YD CHLGHAR ++FD + R+L+ Y V
Sbjct: 2 LKIFNTLTKKKEIFKSIKCGEIKIYVCGITVYDLCHLGHARTFVIFDTILRYLKHYGYQV 61
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YVRNITDIDDKII A KNNE+ L SR I+ D +L+I P+Y+P T++I I
Sbjct: 62 KYVRNITDIDDKIIQRAIKNNETTDHLASRMIQEMYLDLDILNILRPNYEPKVTDHIELI 121
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNF-KKD 182
+ I LI AY + +G+V +S++ NYG LS + F + N +N KKD
Sbjct: 122 INFIRLLIERNHAYVTS----DGNVMFSIQTVYNYGVLSCHKKNQTFTQRNIRNKMIKKD 177
Query: 183 PLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPH 242
P+DF LWK +K+ +PY W S WG GRPGWHIECSA+S LG H DIHGGG DL FPH
Sbjct: 178 PVDFVLWKTAKSGEPY---WISPWGKGRPGWHIECSAISHAFLGKHIDIHGGGSDLVFPH 234
Query: 243 HENEIAQSEGAYK---HKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
HENEIAQS A+ +VN W+H+G + N++KMSKS NF TIR++++KY+PE IR+
Sbjct: 235 HENEIAQSTCAHHITVDSYVNTWIHTGMLTFNDEKMSKSLNNFFTIREIIQKYDPETIRY 294
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIA--- 356
F+L +HYR + YS+ + A+ SL LY A+ IN+ I+ L + +++++ I+
Sbjct: 295 FLLSAHYRKPLRYSDNNIKNARLSLKHLYSALHG---INFNPIVQLYDNNSEKYFISKFN 351
Query: 357 --MNDDFNTPVAISILFDLANIINKNK------SIKMAKQLRGLGNWLGLLEYSSDEFLK 408
MN+DFN P A SILF++A+ +N K + +A L+ L N LG+L + +L
Sbjct: 352 NKMNNDFNFPEAYSILFEMAHALNIAKIKDHVRAKSLAAHLKYLANILGILYQDPEIYLG 411
Query: 409 NNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTE 468
N + K + + I+ IY R ARK K + +DKIR+ L GIILED P GKT
Sbjct: 412 YNTCIKNNKQ-SLTVEKIRELIYMRENARKNKEWQLSDKIRKRLTEIGIILEDKPTGKTI 470
Query: 469 WR 470
WR
Sbjct: 471 WR 472
>gi|437999853|ref|YP_007183586.1| cysteinyl-tRNA synthetase 2 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429339087|gb|AFZ83509.1| cysteinyl-tRNA synthetase 2 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 455
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/467 (47%), Positives = 290/467 (62%), Gaps = 38/467 (8%)
Query: 32 ITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLT 91
+T YDYCHLGHAR+M+VFDIVQRWLR +DV YVRNITDIDDKII + ++SIK +T
Sbjct: 1 MTVYDYCHLGHARIMVVFDIVQRWLRHIGFDVKYVRNITDIDDKIINKSLMEHKSIKEIT 60
Query: 92 SRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYS 151
+I A D L I+ P +P AT Y+ +++ +I+ L LAY+ +G DVN+S
Sbjct: 61 DFYISAMHMDEDALSIEAPYKEPRATGYVDEMVNIIKLLENKDLAYRTPDG----DVNFS 116
Query: 152 VRNFLNYGKLSGRLISSNFNKINEKNNF-----KKDPLDFALWKVSKNNDPYEIRWNSKW 206
++F YGKLSG N ++ N K DPLDF LWK SK +DP + RW S +
Sbjct: 117 TKSFSGYGKLSGM----NLTELRSGNRIPVASSKIDPLDFVLWKASKQDDPNDSRWMSCY 172
Query: 207 GAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSG 266
G GRPGWHIECSAMS +LG+ DIHGGG DL FPHHENEIAQ+EGA+ N+WMH G
Sbjct: 173 GPGRPGWHIECSAMSSSILGNPIDIHGGGPDLVFPHHENEIAQTEGAFGGNLANFWMHCG 232
Query: 267 FVKINNKKMSKSFGNFCTIRDLLKKYN-------------PEVIRFFILRSHYRSTINYS 313
+ +++ KMSKS GN+ TIR + K + E++RFFI+RSHYRS NY+
Sbjct: 233 PLMVDDSKMSKSLGNYYTIRQAIGKESSPNDFRYQVNRREAEMLRFFIIRSHYRSKQNYT 292
Query: 314 EIYLNYAKKSLIRLYLAIKDIP-KINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFD 372
L A+ SL RLYLA+ +I K +K +D + + F MNDDFNTP A+ ILFD
Sbjct: 293 FENLVDAQNSLDRLYLALFNIGLKGEFK--VDWRDDASVAFKSTMNDDFNTPEAMVILFD 350
Query: 373 LANIINKNKSIKMAKQLRGLGNWLGLLEY-------SSDEFLKNNIYTERKKNVNYSEND 425
LA+ +NKNK I AKQL+ L LGLL S + + IY + + S+ D
Sbjct: 351 LASKVNKNKCIYSAKQLKSLAGTLGLLSQDPAVYFSESTRYKTSMIYNDSSDTI--SKED 408
Query: 426 IKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI 472
I+ IY RS +K N++EADKIR L ++ I LED +G T WRR+
Sbjct: 409 IEGLIYKRSIFKKNNNYIEADKIRTMLKDHNIELEDKIDGTTNWRRV 455
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/489 (44%), Positives = 305/489 (62%), Gaps = 29/489 (5%)
Query: 1 MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINN 60
++ L +YN+ +RKK+ F P+T GKV +Y CG+T YDYCHLG+AR M+ FD++ R+L+
Sbjct: 46 LAMLTLYNTLTRKKEEFKPLTDGKVGMYACGVTVYDYCHLGNARAMVNFDVLHRYLKYVG 105
Query: 61 YDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYI 120
YDVT+VRN TD+DDKII A N S +TS++I A ED+ L + P +P AT++I
Sbjct: 106 YDVTFVRNFTDVDDKIIRKANAENISCSEVTSKYIAAFYEDTNALGLVNPTIEPRATDHI 165
Query: 121 PQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKIN-EKNNF 179
P I+ +I KL+ GLAYQ I GDV Y+VR+F YGKLSG+ I + + ++
Sbjct: 166 PDIIAIINKLVDKGLAYQ-----IGGDVFYAVRSFPQYGKLSGKNIEDLESGARVDVSDV 220
Query: 180 KKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLK 239
KKDPLDFALWK +K N+P +W S WG GRPGWHIECSAMS LG FDIH GG DL
Sbjct: 221 KKDPLDFALWKSAKPNEP---KWPSPWGEGRPGWHIECSAMSTKYLGDTFDIHCGGCDLI 277
Query: 240 FPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRF 299
FPHHENEIAQSEGA F +W+H+GF+ I+++KMSKS GNF T R++LKK+ E IR
Sbjct: 278 FPHHENEIAQSEGATGKPFARFWVHNGFLNIDSEKMSKSLGNFFTTREVLKKFPAEAIRH 337
Query: 300 FILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI---------PKINYKKIIDLNEPHA 350
FIL +HYRS I+YSE ++ + K+L R Y + P I ++ + +
Sbjct: 338 FILSAHYRSPIDYSEKNISDSIKALERFYQTKSRLEKFIQQPSDPAIPSQQHVPAKLENL 397
Query: 351 K-RFIIAMNDDFNTPVAISILFDLA----NIINKNKS-IKMAKQLRGLGN----WLGLLE 400
K FI+A++DD NT + + ++F+ +I++N++ K AK + N LG+
Sbjct: 398 KNEFIMALDDDLNTAMVMGLVFEWVRTWNKLIDENRANQKDAKDFLDIINDIHKVLGVFG 457
Query: 401 YSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILE 460
++ +L + + + + E DI I R ARK ++F +D+IR +L+ GI L+
Sbjct: 458 SDANAYL-DELKQKGMAGLLVLEEDILKLIEERKLARKNRDFKRSDEIRDQLLKQGITLK 516
Query: 461 DMPNGKTEW 469
D +G T W
Sbjct: 517 DNTDGTTSW 525
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/485 (43%), Positives = 293/485 (60%), Gaps = 27/485 (5%)
Query: 3 TLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYD 62
+R+YN+ +++K+ F P+ G+V +YVCG T YDY HLGHAR + FD+++R+L Y
Sbjct: 2 AIRVYNTLTKQKEEFRPLRDGEVRMYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGYS 61
Query: 63 VTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQ 122
V V N TDIDDKII A + E K L RF++ ED L ++P D P T ++
Sbjct: 62 VLMVMNFTDIDDKIIRRANETGEDPKELAERFLRLFLEDMEALKVKPADVYPRVTEHMDD 121
Query: 123 ILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSG-RLISSNFNKINEKNNFKK 181
I++ + KL G AY+ ++G V + V+ F +YGKLSG +L E KK
Sbjct: 122 IIEFVRKLQEKGYAYEGSDG-----VYFEVQRFKDYGKLSGIKLEELRKGARVEPGEGKK 176
Query: 182 DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFP 241
+P DFALWK +K +P +W S WG GRPGWHIECS MS LG FDIHGGG DL FP
Sbjct: 177 NPEDFALWKKAKPGEP---KWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFP 233
Query: 242 HHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFI 301
HHENEIAQ+E H++V+YW+H+GF+ +N +KMSKS GNF TIR++L++YNPEVIR FI
Sbjct: 234 HHENEIAQTEACTGHEWVHYWLHTGFLMVNGEKMSKSLGNFVTIREMLERYNPEVIRLFI 293
Query: 302 LRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDI------PKINYKKIIDLNEPHA----- 350
L+ HYRS ++Y+E + +AK +L RLY +++I I +K + E +
Sbjct: 294 LQRHYRSPLDYTEEGMEHAKNNLERLYNTLENIRVAMERADIAFKWGPEEFEAYEAIRNA 353
Query: 351 -KRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKN 409
++F AM+DDFNT A+ +F+ +N +N+ ++ + L L S+ F
Sbjct: 354 REKFHEAMDDDFNTAEALKAVFEASNAVNRYLTVVEKPKESILRKALEFFRMVSEVF--- 410
Query: 410 NIYTE--RKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKT 467
I+ + R++ E I+L I R++ RK KNF ADKIR EL GI LED P G T
Sbjct: 411 GIFEDYFREQRAGEEEALIQLLIDVRAQLRKEKNFALADKIRAELREMGIQLEDTPQG-T 469
Query: 468 EWRRI 472
W+R+
Sbjct: 470 VWKRV 474
>gi|238855655|ref|ZP_04645955.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
gi|260664903|ref|ZP_05865754.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
gi|238831721|gb|EEQ24058.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
gi|260561386|gb|EEX27359.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
Length = 473
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 296/488 (60%), Gaps = 36/488 (7%)
Query: 4 LRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDV 63
++IYN+ +R+K+ F P+ PG+VS+YVCG T Y+Y H+G+AR I FD ++R+L +DV
Sbjct: 1 MKIYNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFDV 60
Query: 64 TYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQI 123
YV N TD+DDK+I A+ ++ L R+I A ED+ L+I+P P AT I I
Sbjct: 61 KYVSNFTDVDDKMINEARAEGITVPELAKRYINAFMEDTTALNIEPATLHPRATEEIKDI 120
Query: 124 LKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISS----NFNKINEKNNF 179
+ I+ LI G AY+ ++GDV Y + F YGKLS + I+S +NE
Sbjct: 121 IAFIKTLIEKGFAYE-----VDGDVYYRAKKFTGYGKLSDQDIASLEEGASQHVNEAEFA 175
Query: 180 KK-DPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDL 238
KK DP+DFALWK K +D EI W+S WG GRPGWHIECS MS LG DIHGGGQDL
Sbjct: 176 KKEDPIDFALWKKQKQSD--EIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233
Query: 239 KFPHHENEIAQSEGAYKHKFVNYWMHSGFVKI--NNKKMSKSFGNFCTIRDLLKKYNPEV 296
+FPHHENEIAQSE KFVNYWMH+GFV + + +KMSKS NF T+ D+LK+ +P+V
Sbjct: 234 EFPHHENEIAQSEAKTGKKFVNYWMHNGFVTVGKDEQKMSKSLHNFVTVHDILKRVDPQV 293
Query: 297 IRFFILRSHYRSTINYSEIYLNYAKKSLIRL---YLAIKD-IPKINYKKIIDLN---EPH 349
+RFF+ YR INYSE L A L ++ L ++D + + N ++ DL E
Sbjct: 294 LRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLKETNSQENQDLTIAIEDS 353
Query: 350 AKRFIIAMNDDFNTPVAISILFDLANIINKNKS------IKMAKQLRGLGNWLGLLEYSS 403
RF AM+DDFN A+S+++DL +INKN S + K L+ L WL +
Sbjct: 354 ENRFKEAMDDDFNVQNALSVVYDLLPVINKNISEDTSDLSALRKFLQHLEKWLAIFGVDI 413
Query: 404 DEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMP 463
D+ + TE+ V+ + +I+ + R EARK K+F +D IR +L IIL+D P
Sbjct: 414 DK-----LTTEK---VSDDDAEIEELVKKRDEARKNKDFATSDTIRDQLAEMNIILQDTP 465
Query: 464 NGKTEWRR 471
G T+WRR
Sbjct: 466 KG-TKWRR 472
>gi|417611566|ref|ZP_12262040.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|345366051|gb|EGW98149.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_EH250]
Length = 437
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/456 (46%), Positives = 280/456 (61%), Gaps = 31/456 (6%)
Query: 27 LYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNES 86
+YVCGIT YD CH+GH R + FD+V R+LR Y + YVRNITDIDDKII A +N ES
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGES 60
Query: 87 IKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKING 146
L R I +D L+I PD +P AT++I +I+++ E+LI G AY +NG
Sbjct: 61 FVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNG---- 116
Query: 147 DVNYSVRNFLNYGKLSGRLI-----SSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIR 201
DV + V YG LS + + + + +++K N P+DF LWK+SK +P
Sbjct: 117 DVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRN----PMDFVLWKMSKEGEP---S 169
Query: 202 WNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNY 261
W S WGAGRPGWHIECSAM+C LG+HFDIHGGG DL FPHHENEIAQS A+ ++VNY
Sbjct: 170 WPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNY 229
Query: 262 WMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAK 321
WMHSG V ++ +KMSKS GNF T+RD+LK Y+ E +R+F++ HYRS +NYSE L A+
Sbjct: 230 WMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQAR 289
Query: 322 KSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNK 381
+L RLY A++ K E RFI AM+DDFNTP A S+LFD+A +N+ K
Sbjct: 290 AALERLYTALRGTDKTVAPAG---GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLK 346
Query: 382 SI------KMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSE 435
+ MA LR L LGLLE + FL++ + + +I+ I R +
Sbjct: 347 AEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADSSEVA-----EIEALIQQRLD 401
Query: 436 ARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRR 471
ARK K++ AD R L GI+LED P G T WRR
Sbjct: 402 ARKAKDWAAADAARDRLNEMGIVLEDGPQGTT-WRR 436
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,716,180,314
Number of Sequences: 23463169
Number of extensions: 339764944
Number of successful extensions: 893143
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6116
Number of HSP's successfully gapped in prelim test: 1061
Number of HSP's that attempted gapping in prelim test: 857240
Number of HSP's gapped (non-prelim): 9589
length of query: 472
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 326
effective length of database: 8,933,572,693
effective search space: 2912344697918
effective search space used: 2912344697918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)