BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14488
(368 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|134093838|ref|YP_001098913.1| exonuclease I [Herminiimonas arsenicoxydans]
gi|133737741|emb|CAL60786.1| Exodeoxyribonuclease I (Exonuclease I) (DNA
deoxyribophosphodiesterase) (dRPase) [Herminiimonas
arsenicoxydans]
Length = 477
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 230/368 (62%), Gaps = 7/368 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWD+++V++ Y L P GI WP +G+ SF+LE L+ N
Sbjct: 110 MFWRNLIDPYAREWQNACGRWDILDVVRTAYALRPEGINWPQHPDGRSSFRLEQLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDALSDVRAT+ LARLIR+ PRLF+F +L KK V EIG P+ RPF +IT
Sbjct: 170 IAHEAAHDALSDVRATIALARLIRDRQPRLFDFCFALHKKDRVATEIGLPLRRPFLHITG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
MF ++ I ++WP+ +HP NKN +I W+L DP + D IR + K ++ E +
Sbjct: 230 MFPAERGCIGIVWPLAVHPTNKNEVIVWDLAADPSELATLDAETIRTRMFSKADALPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI IHLN+SP+VI+NLK LS+ + ++ D+ A ++ + A++ + T IW+ +F
Sbjct: 290 SRLPIKSIHLNKSPVVINNLKTLSAEMTAQWGLDVATALRHAEIAATTPDMTAIWQDVFH 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ D +DE+LY F+ D L LR++SP+ L+ F + +LEEL + Y
Sbjct: 350 RPQEGTPD----VDEDLYGGFVGNNDRRLLQELRALSPEALAKATPGFSDARLEELFWRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +TLS +E +RW+++R +R +N I + EI+ L + A+E +IL AL
Sbjct: 406 RARNFPQTLSAEEAERWEEHRAARLFNGDGGARTIEGMFAEIDQLSETADERGEEILAAL 465
Query: 358 LMYGKSIT 365
Y ++I
Sbjct: 466 YDYAEAIA 473
>gi|340786331|ref|YP_004751796.1| exodeoxyribonuclease I [Collimonas fungivorans Ter331]
gi|340551598|gb|AEK60973.1| Exodeoxyribonuclease I [Collimonas fungivorans Ter331]
Length = 477
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 236/368 (64%), Gaps = 7/368 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWD+++V++ Y L P GI WP + G+PSF+LE L+ N
Sbjct: 110 LFWRNLIDPYAREWQNQCGRWDILDVVRTAYALRPEGIQWPVNDEGRPSFRLELLTKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
LSH+ AHDALSDVRAT+ LARLIR + P+LF+F L+L KK AEIG P RPF +I+
Sbjct: 170 LSHEAAHDALSDVRATIALARLIRQHQPKLFDFCLALHKKDRAGAEIGLPTPRPFLHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
MF ++ +++MWP+ +HP NKN ++ W+L DP + D + +R L K E +
Sbjct: 230 MFPAEQGCLAVMWPLGVHPTNKNEILAWDLAFDPSELFSLDADTVRTRLFSKSADLPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ +HLN+SP+VI+ L+ LS+++ R+ D+ A ++ + A+ + + +W+++F
Sbjct: 290 TRLPLKSVHLNKSPMVINKLQTLSADMTTRWGIDIPLALRHAEIAAQAPDLSGLWRQVFQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD +DE+LY F+ D KL LR+M P+KL+ F++++LEEL F Y
Sbjct: 350 RPEEAASD----VDEDLYGGFVGNNDRRKLNDLRAMPPQKLAAARVSFDDQRLEELAFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +TL+ +E +RW ++R +R ++ + ++M + EI+ L + A+E +IL AL
Sbjct: 406 RARNFPDTLTPEEQERWDEHRAARLFDGEGKARTVDMLFEEIDQLSETADERGEEILGAL 465
Query: 358 LMYGKSIT 365
Y + I
Sbjct: 466 YDYAEMIA 473
>gi|91788799|ref|YP_549751.1| exonuclease I [Polaromonas sp. JS666]
gi|91698024|gb|ABE44853.1| Exodeoxyribonuclease I subunit C [Polaromonas sp. JS666]
Length = 480
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 235/375 (62%), Gaps = 11/375 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N+C RWDL++V++ Y L P GI WP K +GKPSFKLE L+ N
Sbjct: 110 LFWRNLIDPYAREWQNDCGRWDLLDVVRMAYALRPEGIVWPTKEDGKPSFKLEDLARANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIAR----PFF 116
L H+ AHDALSDVRAT+ LARLIR P+LF+F L L KK V AE+G P +R PF
Sbjct: 170 LLHEAAHDALSDVRATIALARLIRKAQPKLFDFCLGLHKKDRVAAELGLPASRQSATPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + +++MWP+ HP NKN L+ W+L HDP + L D+ +R L +
Sbjct: 230 HVSGMFPPERGCLAVMWPLATHPTNKNELLAWDLAHDPSELPLLDVATLRQRLFTRSADL 289
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ L+ L+ + ++ D++ A +N + A+ + + + IW
Sbjct: 290 PEGVLRLPLKSVHLNKSPMVVRKLQTLTPEMAVKWGVDMDAALRNAEKAAGLPDMSAIWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F K D +DE+LY F+ D +L LR++SP +L++ F++ +L+EL
Sbjct: 350 EVFQRPKEAAPD----VDEDLYGGFVGNADRRRLNQLRALSPAELAHSRTGFDDDRLQEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF ETL+ +E +RW+ +R +R + N++ + EI++L + +E I
Sbjct: 406 LFRYRARNFAETLTPEEAERWEAHRAARLLEGEGGARNVDALFAEIDTLSETTDERGQAI 465
Query: 354 LNALLMYGKSITQKI 368
L AL Y ++I ++
Sbjct: 466 LGALYDYAEAIAPEL 480
>gi|152980617|ref|YP_001352252.1| exonuclease I [Janthinobacterium sp. Marseille]
gi|151280694|gb|ABR89104.1| exodeoxyribonuclease I [Janthinobacterium sp. Marseille]
Length = 476
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 235/368 (63%), Gaps = 7/368 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N+C RWD+++V++ Y L P GI WP +G+PSF+LE L+ N
Sbjct: 110 MFWRNLIDPYAREWQNSCGRWDILDVVRTAYALRPEGINWPKHPDGRPSFRLEQLTAENG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDALSDVRAT+ LARLIR P+LF+F L L KK V AEIG P+ RPF +IT
Sbjct: 170 IAHEAAHDALSDVRATIALARLIRERQPKLFDFCLGLHKKDKVAAEIGLPLRRPFLHITG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M ++ I+++WP+ +HP NKN +I W+L DP + D IR + K ++ E +
Sbjct: 230 MIPAERGCIAVVWPLAVHPTNKNEVIVWDLSVDPSELATLDAETIRMRMFSKADALPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI IHLN+SPIVI+NLK LS+ + ++ D+ A ++ + A++ + T IW+ +F
Sbjct: 290 SRLPIKTIHLNKSPIVINNLKTLSAEMTEQWGIDIPTALRHAEVAAAAPDMTAIWQDVF- 348
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + ++DE+LY F+ D L LR++SP+ L+ F + +LEE+++ Y
Sbjct: 349 -YRPQEA--AADVDEDLYGGFVGNNDRRTLQELRALSPEALAQAKPGFSDPRLEEIVWRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+ +E +RW+ +R++R ++ + I + EI+ L + A+E +IL AL
Sbjct: 406 RARNFPHTLNEEEQQRWEDHRVARLFDGEGGARTIETLFAEIDQLSETADERGEEILGAL 465
Query: 358 LMYGKSIT 365
Y ++I
Sbjct: 466 YDYAEAIA 473
>gi|409407386|ref|ZP_11255837.1| exodeoxyribonuclease I [Herbaspirillum sp. GW103]
gi|386433137|gb|EIJ45963.1| exodeoxyribonuclease I [Herbaspirillum sp. GW103]
Length = 478
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 236/369 (63%), Gaps = 8/369 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW N C RWDL++V++ Y L P GI WP K +G SFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWANGCGRWDLLDVVRLTYALRPEGIQWPTKEDGSVSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+ LARLIR +NPRLF+F L+L KK AEIG P ARPF +++
Sbjct: 170 LAHEAAHDALSDVRATIALARLIRQHNPRLFDFALALHKKDKAAAEIGLPAARPFLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + ++LMWP+ +HP NKN +I W+L HDP + D +R+ + +++ E
Sbjct: 230 MFPVANGCLALMWPLGMHPTNKNEVIAWDLGHDPGELAGMDAATVRERMFTRRDELPEGM 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IHLN+SP+V+ +LK LS+ + D++ A ++ + A+++ + + +W++++
Sbjct: 290 TRLPVKSIHLNKSPMVVGSLKTLSAERAGQLNIDVDAALRHAEKAAALPDLSPLWREVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ +++DE+LY FI D +L LR++ + L+ + F++++L E++F Y
Sbjct: 350 ----REQEGPVDVDEDLYGGFIGNADRRQLTQLRALPGQALAGASVAFDDRRLNEILFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-ILNA 356
RARNF ETLS +E + W+++R +R + + + +I+ L ++A++ T+ IL A
Sbjct: 406 RARNFPETLSPEEAQHWEEHRAARLFEGAGGARTVAQLFEQIDQLQEEADDERTQDILAA 465
Query: 357 LLMYGKSIT 365
L Y + I
Sbjct: 466 LYDYAEMIA 474
>gi|121604837|ref|YP_982166.1| exonuclease I [Polaromonas naphthalenivorans CJ2]
gi|120593806|gb|ABM37245.1| Exodeoxyribonuclease I subunit C [Polaromonas naphthalenivorans
CJ2]
Length = 482
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 234/374 (62%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +GKPSFKLE L+ N
Sbjct: 110 LFWRNLIDPYGREWQNECGRWDLLDVVRMAYALRPDGIVWPLKEDGKPSFKLEDLARANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARL+R PRLF+F L L KK V AE+G P +ARPF
Sbjct: 170 LLHETAHDALSDVRATIALARLVRTAQPRLFDFCLGLHKKARVSAELGLPATARMARPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++M+P+ HP NKN ++ W+L HDP + L D+ +R L K
Sbjct: 230 HVSGMFPAERGCLAVMFPLATHPANKNEVLAWDLAHDPSELPLLDVATLRLRLFSKSADL 289
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI +HLN+SP+V+ NL+ L+ + R+ D A ++ + A+ + + + +W
Sbjct: 290 PEGVQRLPIKSVHLNKSPMVVRNLQTLTPAMAARWGVDTEQALRHAEIAAGLPDMSAVWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F ++ E ++DE LY FI D +L LR MS +L++ F++ +L+EL
Sbjct: 350 EVFR----RAAEAEPDVDENLYGGFIGNDDRRRLNQLREMSGAELAHSRMGFDDGRLKEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF ETL+ ++ +RW+ +R +R + + N++ + I++L + A+E I
Sbjct: 406 VFRYRARNFPETLNPEDTERWEAHRAARLLDGEGGARNVDALFAGIDALAQTADERGEAI 465
Query: 354 LNALLMYGKSITQK 367
L AL Y ++I +
Sbjct: 466 LGALYDYAEAIVPE 479
>gi|239815634|ref|YP_002944544.1| exonuclease I [Variovorax paradoxus S110]
gi|239802211|gb|ACS19278.1| Exodeoxyribonuclease I [Variovorax paradoxus S110]
Length = 479
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 229/374 (61%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N+C RWDL++V++ Y L P GI WP K +GKPSFKLE L+ N
Sbjct: 109 LFWRNLIDPYAREWQNDCGRWDLLDVVRLTYALRPDGIEWPKKEDGKPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR P+LF F L KK V +E+G P ARPF
Sbjct: 169 LLHESAHDALSDVRATIALARLIRERQPKLFEFAFGLHKKDRVASELGLPAMRETARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + + +MWP+ HP NKN LI W+L HDP + D+ +R L +
Sbjct: 229 HVSGMFPVERGCLGVMWPLASHPTNKNELIAWDLAHDPSELRDLDVETLRLRLFTRTADL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP+V+ NL+ L+ + R+ DL+ A ++ A + + + IW
Sbjct: 289 PEGVVRLPVKGIHLNKSPMVVGNLRTLAPAMAERWNVDLDAALRHAAIARDLPDMSAIWS 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+++ K D +DE+LY F+ D +L LR++SP++L+ F++ +LEE+
Sbjct: 349 QVYARPKEAVPD----VDEDLYGGFVGNGDRRRLNQLRALSPEELAKDRTGFDDGRLEEI 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARN+ E LS +E +RW+ R +R + + I M + E+++L + A+E +I
Sbjct: 405 LFRYRARNWPELLSSEEAERWEALRAARLFKGEGGARTIEMLFSEVDALSETADERGEEI 464
Query: 354 LNALLMYGKSITQK 367
L AL Y ++I +
Sbjct: 465 LGALYEYAEAIAPE 478
>gi|319793918|ref|YP_004155558.1| exodeoxyribonuclease i [Variovorax paradoxus EPS]
gi|315596381|gb|ADU37447.1| Exodeoxyribonuclease I [Variovorax paradoxus EPS]
Length = 479
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 232/374 (62%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N+C RWDL++V++ Y L P GI WP K +GKPSFKLE L+ N
Sbjct: 109 LFWRNLIDPYAREWQNDCGRWDLLDVVRLTYALRPEGIQWPKKEDGKPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR+ P+LF+F L KK V +E+G P A+PF
Sbjct: 169 LLHESAHDALSDVRATIALARLIRDKQPKLFDFAFGLHKKDRVASELGLPAMRETAKPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MFS + I++MWP+ HP NKN L+ W+L HDP + D+ +R L +
Sbjct: 229 HVSGMFSVERGCIAVMWPLASHPTNKNELLAWDLAHDPSELRDLDVETLRLRLFTRTADL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP+V+ NL+ L+ + R+ DL+ A ++ A + + + IW
Sbjct: 289 PEGVLRLPVKGIHLNKSPMVVGNLRTLAPPMAERWGIDLDTAMRHAAIARDLPDMSAIWS 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+++ K D +DE+LY F+ D +L LR +S +L+ F++ +LEE+
Sbjct: 349 QVYARPKEATPD----VDEDLYGGFVGNADRRRLNQLRGLSAGELAKDRTGFDDGRLEEI 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARN+ E+L+ +E +RW+ R++R ++ + I + E+++L + A+E +I
Sbjct: 405 VFRYRARNWPESLAPEETERWEALRVARLFHGEGGARTIEQLFSEVDALSETADERGEEI 464
Query: 354 LNALLMYGKSITQK 367
L AL Y ++I +
Sbjct: 465 LGALYEYAEAIAPE 478
>gi|329907300|ref|ZP_08274615.1| Exodeoxyribonuclease I [Oxalobacteraceae bacterium IMCC9480]
gi|327547025|gb|EGF31914.1| Exodeoxyribonuclease I [Oxalobacteraceae bacterium IMCC9480]
Length = 477
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 228/368 (61%), Gaps = 7/368 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ Y L P GI WP + GKPSF+LE L+ N
Sbjct: 110 LFWRNLIDPYAREWQNQCGRWDLMDVVRMTYALRPEGIHWPMNDEGKPSFRLELLTKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H AHDALSDVRAT+ LARLIR P+LF+F +L KK V AEIG P +PF +++
Sbjct: 170 IAHAAAHDALSDVRATIALARLIRTQQPKLFDFCFALHKKDRVSAEIGLPARKPFLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
MF ++ + +MWP+ +P NKN +I W+L HDP + D + IR + + E +
Sbjct: 230 MFPAERGCLGVMWPLATYPTNKNEVIAWDLSHDPSELATLDADTIRLRMFTRSADLPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI IHLN+SP+V+ NLK LS + +++ DL A ++ A+++++ +W+++F
Sbjct: 290 TRLPIKTIHLNKSPMVVGNLKTLSPAMAEKWQIDLEQAHRHATIAATLVDMDALWQQVFQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D +DE+LYN F+ D KL LR++SP L+ + F++ +LEEL+F Y
Sbjct: 350 RPAQATPD----VDEDLYNGFVGNGDRRKLTELRALSPTALAKTHPGFDDVRLEELLFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +TL E +RW+++R R + +++ + EI+ L ++A+ +IL AL
Sbjct: 406 RARNFPDTLDAAEAERWEQHRSDRLFEGSAGARTVDILFGEIDQLSEQADTRGEEILGAL 465
Query: 358 LMYGKSIT 365
Y + I
Sbjct: 466 YDYVEMIA 473
>gi|241763393|ref|ZP_04761448.1| Exodeoxyribonuclease I [Acidovorax delafieldii 2AN]
gi|241367435|gb|EER61746.1| Exodeoxyribonuclease I [Acidovorax delafieldii 2AN]
Length = 481
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 234/375 (62%), Gaps = 12/375 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPDGIHWPRKEDGSPSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L+H+ AHDALSDVRAT+ LARLIR +NPRLF+F LSL KK V AE+ P ARPF
Sbjct: 170 LAHEAAHDALSDVRATIALARLIRQHNPRLFDFALSLHKKDRVAAELRLPATALTARPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN +I W+L HDP++ ++IR + +
Sbjct: 230 HVSGMFPAERGCLAVMWPLASHPTNKNEVIAWDLAHDPRELATLGTDEIRLRMFSRAADL 289
Query: 177 KED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E +P+ IHLN+SP+V+ N+ L+ L R+ DL A ++ + A S+ + + IW
Sbjct: 290 PEGMTRLPVKTIHLNKSPMVVGNVNTLTPALAQRWGIDLVQAAQHAEVARSLPDMSGIWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F ++ ++D++LY F+ D +L LR+M +KL+ F++ +LEEL
Sbjct: 350 AVF----ARPAEPAADVDQDLYGGFVGNSDRRRLNDLRAMDGQKLAAARTGFDDPRLEEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF TLS +E +RW+ +R + ++ + ++ + EI+ + + A++ T+
Sbjct: 406 VWRYRARNFPTTLSPEEGERWEAHRAACLFDGQGGARTVDRLFTEIDQISETADDERTQE 465
Query: 353 ILNALLMYGKSITQK 367
IL AL Y + I +
Sbjct: 466 ILGALYDYAEHIAPE 480
>gi|399017419|ref|ZP_10719611.1| exonuclease I [Herbaspirillum sp. CF444]
gi|398103293|gb|EJL93464.1| exonuclease I [Herbaspirillum sp. CF444]
Length = 481
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 233/374 (62%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNG-KPSFKLEHLSFVN 59
MFWRNLI+PY REW+NNC RWDL++V++ Y L P GI WP K +G PSFKLEHL+ N
Sbjct: 110 MFWRNLIDPYAREWQNNCGRWDLLDVVRTTYALRPEGIAWPKKEDGVTPSFKLEHLTKQN 169
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYIT 119
++H+ AHDALSDVRAT+ ARLI+ PRLF+F L+L KK V AEIG P +PF +++
Sbjct: 170 GIAHEAAHDALSDVRATIAFARLIKEKQPRLFDFCLALHKKDRVAAEIGLPTPKPFLHVS 229
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED 179
MF + +++MWP+ HP NKN +I W+L DP + D++ IR + K + E
Sbjct: 230 GMFPAAQGCLAVMWPLGTHPTNKNEIIAWDLSRDPGELTGLDVDTIRTRMFSKTDDLPEG 289
Query: 180 I---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+ P+ IHLN+SP+VIS+LK L++ + D++ A +N A+++ +W K+F
Sbjct: 290 VSRLPVKTIHLNKSPMVISSLKTLTAARAAEFGLDIDAALQNAAAAAALPEMGAVWAKVF 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNV---NFCFENKKLEEL 293
K D +DE+LY F+ D +L LR++SP++L+ F++ +LEEL
Sbjct: 350 QRPKEAAPD----VDEDLYGGFVGNNDRRQLTQLRALSPQQLAQAAQTRITFDDVRLEEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF +TLS +E +RW+ +R +R ++ + ++ + +I+ L + +E +I
Sbjct: 406 LFRYRARNFPDTLSAEETQRWEAHRAARLFDGEGGARTLDALFEQIDQLSESVDERGEEI 465
Query: 354 LNALLMYGKSITQK 367
L AL Y + I +
Sbjct: 466 LGALYDYAEMIAPE 479
>gi|398832180|ref|ZP_10590344.1| exonuclease I [Herbaspirillum sp. YR522]
gi|398223717|gb|EJN10052.1| exonuclease I [Herbaspirillum sp. YR522]
Length = 478
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 229/369 (62%), Gaps = 8/369 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G SFKLEHL+ N
Sbjct: 110 LFWRNLIDPYAREWQNGCGRWDLLDVVRLCYALRPEGINWPTKEDGSVSFKLEHLTQANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LARL+R +NPRLF+F L+L KK V EIG P RPF +++
Sbjct: 170 LVHEAAHDALSDVRATIALARLLRQHNPRLFDFALALHKKDRVATEIGLPTPRPFLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + ++LMWP+ IHP NKN L+ W+L DP + D + R+ L + ++ E
Sbjct: 230 MFPAARGCLALMWPLGIHPTNKNELLAWDLSVDPGELAGLDASTARERLFTRSDAMPEGM 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ + IHLN+SP+V+ NLK LS+ + D++ A ++ + A+++ + ++W++++
Sbjct: 290 TRLALKSIHLNKSPMVVGNLKTLSATRAAQLGIDVDLALRHAEVAAALPDLGHLWQQVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ +D +DE+LY F+ D +L LR+M+P+ L+ + F + +L +++F Y
Sbjct: 350 REQQAAAD----VDEDLYGGFVGNDDRRQLTQLRAMTPQALAAASVSFADARLTQILFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA-NEHDTKILNA 356
RARNF +TLS +E W+ +R +R ++ I + +I+ L + +E ++L A
Sbjct: 406 RARNFPDTLSAQESADWEAHRAARLFDGAGGARTIAQLFEQIDQLQETTDDEQAQEVLGA 465
Query: 357 LLMYGKSIT 365
L Y + I
Sbjct: 466 LYDYAEMIA 474
>gi|445495325|ref|ZP_21462369.1| exodeoxyribonuclease I [Janthinobacterium sp. HH01]
gi|444791486|gb|ELX13033.1| exodeoxyribonuclease I [Janthinobacterium sp. HH01]
Length = 480
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 229/367 (62%), Gaps = 11/367 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP + +GKPSFKLEHL+ N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPEGIEWPMREDGKPSFKLEHLAKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIA----RPFF 116
L H+ AHDALSDVRAT+ LARLIR P+LF+F L+L KK V EIG +A PF
Sbjct: 170 LLHEAAHDALSDVRATIALARLIRAKQPKLFDFCLALHKKDRVADEIGMHLAPALRAPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ I+L+WP+ HP NKN +I W+ +DP + D + IR + + ++
Sbjct: 230 HVSGMFPAERGCIALVWPLATHPTNKNEVIVWDCTYDPTELFTLDADTIRTRIFSRADAL 289
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP+++SNLK LS + ++ DL + A++ N W+
Sbjct: 290 PEGVTRLPVKSIHLNKSPMLVSNLKTLSPAMAAKWGIDLEQGKAHAALAAAGRNMDIEWE 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F + EL++DE+LYN F+ K+D L LR +P KL+ + F + +L EL
Sbjct: 350 QVFH----RPAGAELDVDEDLYNGFVGKEDRRMLDTLRKETPAKLATASPSFSDPRLLEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF ETLS E++ W+++R +RFY +I+ F+ EI+ L + A+E +I
Sbjct: 406 LFRYRARNFPETLSEGEMEHWEQHRAARFYEGAGGARSIDQFFGEIDHLQQDADERAEQI 465
Query: 354 LNALLMY 360
L L Y
Sbjct: 466 LAELYEY 472
>gi|427403078|ref|ZP_18894075.1| hypothetical protein HMPREF9710_03671 [Massilia timonae CCUG 45783]
gi|425718089|gb|EKU81041.1| hypothetical protein HMPREF9710_03671 [Massilia timonae CCUG 45783]
Length = 495
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 227/372 (61%), Gaps = 11/372 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW++NC RWDL++V++ Y L P GI WP + +GKPSFKLEHLS N
Sbjct: 124 LFWRNLIDPYAREWQHNCGRWDLLDVVRMVYALRPEGIEWPTREDGKPSFKLEHLSAANG 183
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGW---PIAR-PFF 116
L+H+ AHDALSDVRAT+ LARLIR+ PRLF+F L LR+K V EIG P R PF
Sbjct: 184 LAHEAAHDALSDVRATIALARLIRDRQPRLFDFCLELRRKDRVATEIGLHLDPGQRQPFL 243
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ + L++P+ HP NKN ++ W+ HDP + D + IR + +
Sbjct: 244 HVSGMFPVEYGCLGLVYPLAQHPTNKNEVLVWDCRHDPSELFALDADTIRTRMFTRAGDL 303
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI +HLN+SP+++ NLK L ++L R+ DL + A+ + IW
Sbjct: 304 PEGVTRLPIKSVHLNKSPMLVGNLKTLRADLATRWDIDLERGRAHAALAAGGPDMRAIWA 363
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + +++DE+LY F+S+ D +L LR P+ L+ FE+++L EL
Sbjct: 364 QVLAKPGAGET---VDVDEDLYGGFVSRDDRRQLESLRMQKPEALAR-RVSFEDERLNEL 419
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF TLS E++ W+ +R +R + + ++ + EI++L + A+E +I
Sbjct: 420 LFRYRARNFPHTLSEDEMQLWEAHRAARLFEGAHGARTVDQLFTEIDALSETADERAEEI 479
Query: 354 LNALLMYGKSIT 365
L AL Y +SI
Sbjct: 480 LGALYDYAESIA 491
>gi|300312923|ref|YP_003777015.1| exodeoxyribonuclease I [Herbaspirillum seropedicae SmR1]
gi|300075708|gb|ADJ65107.1| exodeoxyribonuclease I (3'-> 5' specific) protein [Herbaspirillum
seropedicae SmR1]
Length = 467
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 211/323 (65%), Gaps = 7/323 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K++G SFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWQNGCGRWDLLDVVRLTYALRPQGIQWPKKDDGSISFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LARLIR NNPRLF+F L+L KK AEIG P+ RPF + +
Sbjct: 170 LVHEAAHDALSDVRATIALARLIRQNNPRLFDFALALYKKDKAAAEIGLPVPRPFLHASG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
MF H ++LMWP+ +HP NKN +I W+L HDP + D +R+ L K++ E +
Sbjct: 230 MFPVAHGCLALMWPLGMHPTNKNEVIAWDLRHDPSELATLDAATVRERLFSKRDQLPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ IHLN+SP+V+ +LK LS+ D+ A ++ A+++ + T +W +++
Sbjct: 290 ERLPVKSIHLNKSPMVVGSLKTLSAERAAELDIDVEAALRHADKAAALPDLTRLWSEVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
S+ ++DE+LY FI D +L LR++SP+ L+ + F++ +L E++F Y
Sbjct: 350 ----RESEGPADVDEDLYGGFIGNGDRRQLNQLRALSPQALATASVAFDDARLNEILFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRIS 320
RAR+F ETLS +E + W+++R +
Sbjct: 406 RARSFPETLSPEEAQHWEEHRAA 428
>gi|398812595|ref|ZP_10571313.1| exonuclease I [Variovorax sp. CF313]
gi|398076890|gb|EJL67934.1| exonuclease I [Variovorax sp. CF313]
Length = 479
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 233/374 (62%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N+C RWDL++V++ Y L P GI WP K +GKPSFKLE L+ N
Sbjct: 109 LFWRNLIDPYAREWQNDCGRWDLLDVVRLTYALRPDGIEWPKKEDGKPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR+ P+LF+F L +K V +E+G P A+PF
Sbjct: 169 LLHESAHDALSDVRATIALARLIRDRQPKLFDFAFGLHRKDRVASELGLPAMRETAKPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + +++MWP+ HP NKN L+ W+L HDP + D+ +R L +
Sbjct: 229 HVSGMFPVERGCLAVMWPLASHPTNKNELLAWDLAHDPSELRDIDVETLRLRLFTRTADL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP+V+ NL+ L+ + R+ DL+ A ++ A + + + IW
Sbjct: 289 PEGVVRLPLKGIHLNKSPMVVGNLRTLAPAMAGRWGVDLDTAMRHAAIARDLPDMSAIWS 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+++ K D ++DE+LY F+ D +L LR++SP++L+ F++ +L+E+
Sbjct: 349 QVYARPK----DATPDVDEDLYGGFVGNADRRRLNQLRNLSPEELAKDRTGFDDGRLDEI 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARN+ E L+ E +RW+ R+++ + + I M + E+++L + A+E +I
Sbjct: 405 LFRYRARNWPELLNEDENERWEALRVAKLFKGEGGARTIEMLFSEVDALSENADERGEEI 464
Query: 354 LNALLMYGKSITQK 367
L AL Y ++I +
Sbjct: 465 LGALYEYAEAIAPE 478
>gi|89900857|ref|YP_523328.1| exonuclease I [Rhodoferax ferrireducens T118]
gi|89345594|gb|ABD69797.1| Exodeoxyribonuclease I subunit C [Rhodoferax ferrireducens T118]
Length = 485
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 223/374 (59%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N+C RWDL++V++ Y L P G+ WP GKPSFKL LS N
Sbjct: 114 MFWRNLIDPYAREWQNDCGRWDLLDVVRTAYALRPDGMEWPLNAEGKPSFKLTDLSAANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H+ AHDALSDVRAT+ LARLI+ P+LF+F L KK V+AE+G P ARPF
Sbjct: 174 LLHEAAHDALSDVRATIALARLIKTAQPKLFDFCFGLHKKDRVMAELGLPTTLTQARPFL 233
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+I+ MF+ + ++LMWP+ +HP NKN L+ W+L DP++ + +IR L K
Sbjct: 234 HISGMFAPERGCLALMWPLAMHPANKNELLAWDLAFDPRELAQMNAEQIRLRLFTKTADL 293
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP VI N K LSS + R+ +L+ N A ++ + + IW
Sbjct: 294 PEGVQRLPVKSIHLNKSPTVIGNYKTLSSAMAQRWGLNLDAQLANAAHAQALPDMSGIWP 353
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F D +DE+LY F+ D +L LR + ++L++ F++ +L EL
Sbjct: 354 AVFKRPAAATPD----VDEDLYGGFVGNADRRRLNDLRQLKAQELASARPAFDDARLTEL 409
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
++ YRARNF ++LS EL RW+ +R +R ++ + I + E++SL + A+E I
Sbjct: 410 LWRYRARNFPQSLSADELARWEAHRSARLFDGEGGALTIEQLFEELDSLAESADERGEAI 469
Query: 354 LNALLMYGKSITQK 367
L AL Y + I +
Sbjct: 470 LGALYDYAELIAPQ 483
>gi|332531005|ref|ZP_08406927.1| exonuclease I [Hylemonella gracilis ATCC 19624]
gi|332039566|gb|EGI75970.1| exonuclease I [Hylemonella gracilis ATCC 19624]
Length = 488
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 232/382 (60%), Gaps = 18/382 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNG----KPSFKLEHLS 56
+FWRNLI+PY REW+N CSRWDL++V++ L P GI WP G KPSFKLEHL+
Sbjct: 109 LFWRNLIDPYAREWQNECSRWDLLDVVRLCRALRPEGIEWPMHREGEMKGKPSFKLEHLT 168
Query: 57 FVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----A 112
N LSH+ AHDALSDVRAT+ LARLIR+ PRLF+F L+LRKK V AE+G P A
Sbjct: 169 AANGLSHEAAHDALSDVRATIALARLIRDKQPRLFDFALALRKKDAVAAELGLPTSQAQA 228
Query: 113 RPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFK 172
RPF +++ MF ++ +SLMWP+ HP NKN LI W+L DP + ++ IR L +
Sbjct: 229 RPFLHVSGMFPAERGCLSLMWPLATHPTNKNELIAWDLSADPAELAHLTVDDIRLRLYTR 288
Query: 173 KNSFKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNT 229
+ E + PI +HLN+SP+V+SNLK L L R+ DL+ A +N A + + +
Sbjct: 289 TDDLPEGVSRLPIKSVHLNKSPMVVSNLKTLRPELAQRWGLDLDAALRNAAVARELPDMS 348
Query: 230 YIWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKK 289
+W ++F + ++DE+LY F+ +D +LA LR++ P++L+ F++ +
Sbjct: 349 ALWPQVFQRPAQAGTP---DVDEDLYGGFVGNEDRRRLARLRALPPQELATSRAGFDDAR 405
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH 349
L +++F YRARNF +TL+ E RW +R++R + N++ + E++ L + A E
Sbjct: 406 LGDILFRYRARNFPDTLNEDEQARWLAHRVARLVEGADGARNLDALFAELDRLGQDATEQ 465
Query: 350 DTK----ILNALLMYGKSITQK 367
+ IL AL Y + I +
Sbjct: 466 GDERGEAILEALYAYAEQIAPE 487
>gi|365091945|ref|ZP_09329196.1| exonuclease I [Acidovorax sp. NO-1]
gi|363415682|gb|EHL22808.1| exonuclease I [Acidovorax sp. NO-1]
Length = 481
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 232/375 (61%), Gaps = 12/375 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GITWP K++G PSFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPDGITWPKKDDGTPSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR +N +LF+F LSL KK V AE+ P AR F
Sbjct: 170 LVHEAAHDALSDVRATIALARLIRQHNTKLFDFALSLHKKDRVAAELRLPATTVTARAFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN LI W+L HDP++ ++ IR + K ++
Sbjct: 230 HVSGMFPTERGCLAVMWPLASHPTNKNELIAWDLAHDPRELATLNVEDIRLRMFSKADAL 289
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IHLN+SP+V+ N+ L+ L R+ DL A ++ + A ++ + + IW
Sbjct: 290 PEGVTRLPIKTIHLNKSPMVVGNVNTLTPALAQRWGIDLAQAAQHAEVACALPDMSGIWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + D +D++LY F+ D L LR++S +L+ F++ +L EL
Sbjct: 350 AVFARPQEPAPD----VDQDLYGGFVGNNDRRLLNDLRTLSGDQLAKARANFDDPRLAEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF +TLS +E +RW+ +R + ++ + + + EI+ L + A++ T+
Sbjct: 406 LWRYRARNFPQTLSPEEQERWEAHRAACLFDGQGGARTVEQLFTEIDELSETADDERTQD 465
Query: 353 ILNALLMYGKSITQK 367
IL AL Y + I +
Sbjct: 466 ILGALYDYAEHIAPE 480
>gi|395009189|ref|ZP_10392756.1| exonuclease I [Acidovorax sp. CF316]
gi|394312874|gb|EJE49984.1| exonuclease I [Acidovorax sp. CF316]
Length = 479
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 230/375 (61%), Gaps = 12/375 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GITWP K +G PSFKLEHLS N
Sbjct: 108 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPDGITWPKKEDGAPSFKLEHLSKANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR +N +LF+F LSL KK V AE+ P A+PF
Sbjct: 168 LLHEAAHDALSDVRATIALARLIRQHNTKLFDFALSLHKKDRVAAELRLPATAITAKPFL 227
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + +++MWP+ HP NKN LI W+L HDP + +IR + +
Sbjct: 228 HVSGMFPVERGCLAVMWPLASHPTNKNELIAWDLAHDPTPLASMGVEEIRLRMFSRAADL 287
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IHLN+SP+V+ N+ L++ + DL A ++ + A + + + IW
Sbjct: 288 PEGVTRLPIKTIHLNKSPMVVGNVNTLTAERARHWNMDLPQAAQHAEIARVLPDMSGIWP 347
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F + D +D++LY F+ D +L +R+MS +KL+ F++ +L+EL
Sbjct: 348 QVFARPEEPTPD----VDQDLYGGFVGNGDRRQLTDMRAMSGEKLARTRLSFDDPRLKEL 403
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF +TL+ +E +RW+K+R + ++ + + EI++L + A++ T+
Sbjct: 404 VWRYRARNFPQTLTPEEHERWEKHRAACLFDGAGGARTVEQLFTEIDNLSETADDDRTQD 463
Query: 353 ILNALLMYGKSITQK 367
IL AL Y + I +
Sbjct: 464 ILGALYDYAEQIAPE 478
>gi|351732145|ref|ZP_08949836.1| exonuclease I [Acidovorax radicis N35]
Length = 480
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 226/374 (60%), Gaps = 11/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GITWP K +G PSFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPDGITWPKKEDGSPSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR +N +LF+F LSL KK V AE+ P RPF
Sbjct: 170 LLHEAAHDALSDVRATIALARLIRQHNTKLFDFALSLHKKDRVAAELRLPATAITTRPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN LI W+L HDP ++IR + K ++
Sbjct: 230 HVSGMFPAERGCLAVMWPLASHPTNKNELIAWDLAHDPAPLATMGPDEIRLRMFSKADAL 289
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ IHLN+SP+V+ N+ L+ L R+ D+ A ++ + A ++ + + IW
Sbjct: 290 PEGVTRLPVKTIHLNKSPMVVGNVNTLTPALAQRWGIDMAQAAQHAEVAHALPDMSGIWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + D +D++LY F+ D L LR++ KL+ F++ +L EL
Sbjct: 350 AVFARPQEPAPD----VDQDLYGGFVGNNDRRLLNDLRALGGDKLAKARANFDDPRLAEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
++ YRARNF +TLS +E +RW+ +R + ++ + + + EI+ + + A++ I
Sbjct: 406 LWRYRARNFPQTLSPEEAERWEAHRAACLFDGEGGARTVEQLFTEIDEMSETADDRAQDI 465
Query: 354 LNALLMYGKSITQK 367
L AL Y + I +
Sbjct: 466 LGALYDYAEHIAPE 479
>gi|398805944|ref|ZP_10564899.1| exonuclease I [Polaromonas sp. CF318]
gi|398090122|gb|EJL80611.1| exonuclease I [Polaromonas sp. CF318]
Length = 489
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 228/384 (59%), Gaps = 20/384 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNN---------GKPSFK 51
+FWRNLI+PY REW+N+C RWDL++V++ Y L P GI WP K + +PSFK
Sbjct: 110 LFWRNLIDPYAREWQNDCGRWDLLDVVRMCYALRPEGIVWPRKPDERFPDDPSVTRPSFK 169
Query: 52 LEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI 111
LE L+ N L H AHDALSDVRAT+ LARLIR P+LF+F LSL KK V E+G P
Sbjct: 170 LEDLARANGLMHDAAHDALSDVRATIALARLIRQAQPKLFDFALSLHKKDRVATELGLPT 229
Query: 112 ----ARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRD 167
A+PF +I+ MF + +++MWP+ HP NKN L+ W+L DP + L D+ +R
Sbjct: 230 SPQTAQPFLHISGMFPPERGCLAVMWPLATHPTNKNELLAWDLSQDPAELPLLDVATLRQ 289
Query: 168 YLCFKKNSFKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS 224
L + E + PI +HLN+SP+V+ L L+ + ++ D+ A +N + A++
Sbjct: 290 RLFSRSADLPEGVQRLPIKSVHLNKSPMVVRKLATLTPEMAAQWGVDIPAALRNAEKAAA 349
Query: 225 ILNNTYIWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFC 284
+ + + IW ++F K D +DE+LY F+ D +L LR++SP +L++
Sbjct: 350 LPDMSAIWPEVFQRPKEAAPD----VDEDLYGGFVGNADRRRLNQLRALSPAELAHSRTG 405
Query: 285 FENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK 344
F++ +LEE++F YRARNF ETLS ++ +RW+ +R++ + N++ + I+ L +
Sbjct: 406 FDDDRLEEILFRYRARNFPETLSPEDTERWEAHRVAWLLEGEGGARNVDALFARIDVLSE 465
Query: 345 KANEHDTKILNALLMYGKSITQKI 368
+E IL AL Y ++I +
Sbjct: 466 TTDERGEAILGALYDYAEAIAPDL 489
>gi|124266553|ref|YP_001020557.1| exonuclease I [Methylibium petroleiphilum PM1]
gi|124259328|gb|ABM94322.1| Exodeoxyribonuclease I subunit C [Methylibium petroleiphilum PM1]
Length = 479
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 218/370 (58%), Gaps = 9/370 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNL++PY REW+N C RWDL++V++ Y L P GI WP +G+ SFKLEHL+ N
Sbjct: 110 LFWRNLMDPYAREWQNGCGRWDLLDVVRCTYALRPEGIEWPRHEDGRASFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+GLARLIR + PRL++F L +K V+AEIG RPF +I+
Sbjct: 170 LAHEAAHDALSDVRATIGLARLIRRHQPRLWDFCFRLHRKDAVMAEIGAGARRPFLHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ ++ ++ +WP+ HP NKN LI W+L DP + D IR L K E
Sbjct: 230 MYPAERGCLAAVWPLGAHPTNKNELIVWDLAADPSELYGLDAAAIRQRLFTKAEDLPEGT 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFK--NIKCASSILNNTYIWKKI 235
+PI IH+N+SPIVI NLK LS + R+ +D + +I A L +W +
Sbjct: 290 TRLPIKSIHINKSPIVIGNLKTLSPAMAERWGYDAARVQRHADIALAHDALPRA-LWADV 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F + ++DE+LY F+S D L LR + P+ L+ FE+ +LEEL+F
Sbjct: 349 FARPAPEQAP---DVDEDLYGGFVSNADRRTLERLRGLPPEGLAGQRPSFEDGRLEELLF 405
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARNF +TL +E +W+++R R + ++ F+ I++L + A+E IL
Sbjct: 406 RYRARNFPDTLDAEERAQWEQHRAERLHLGVGGGSSLAAFFERIDALSESADERGQDILG 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALYDYAEQIA 475
>gi|407939292|ref|YP_006854933.1| exonuclease I [Acidovorax sp. KKS102]
gi|407897086|gb|AFU46295.1| exonuclease I [Acidovorax sp. KKS102]
Length = 482
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 229/376 (60%), Gaps = 13/376 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNG-KPSFKLEHLSFVN 59
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTYALRPDGINWPKKEDGVTPSFKLEHLSKAN 169
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPF 115
L H AHDALSDVRAT+ LARLIR +N +LF+F LSL KK V AE+ P AR F
Sbjct: 170 GLQHDAAHDALSDVRATIALARLIRQHNTKLFDFALSLHKKDRVAAELRLPATTATARAF 229
Query: 116 FYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS 175
+++ MF ++ +++MWP+ HP NKN LI W+L HDP++ ++ IR + K ++
Sbjct: 230 LHVSGMFPTERGCLAVMWPLASHPTNKNELIAWDLAHDPRELATLNVEDIRLRMFSKADA 289
Query: 176 FKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW 232
E + PI IHLN+SP+V+ N+ L+ L R+ DL A ++ + A ++ + + IW
Sbjct: 290 LPEGVTRLPIKTIHLNKSPMVVGNVNTLTPALAQRWGIDLAQAAQHAEVARALPDMSGIW 349
Query: 233 KKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+F + D +D++LY F+ D L LR++S KL+ F++ +L E
Sbjct: 350 PAVFARPQEPAPD----VDQDLYGGFLGNNDRRLLNDLRTLSGDKLAKARAHFDDPRLAE 405
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK 352
L++ YRARNF +TLS +E +RW+ +R + ++ + + + EI+ L + A++ T+
Sbjct: 406 LLWRYRARNFPQTLSPEEQERWEAHRAACLFDGQGGARTVEQLFTEIDELSETADDERTQ 465
Query: 353 -ILNALLMYGKSITQK 367
IL AL Y + I +
Sbjct: 466 DILGALYDYAEHIAPE 481
>gi|395761160|ref|ZP_10441829.1| exonuclease I [Janthinobacterium lividum PAMC 25724]
Length = 482
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 229/374 (61%), Gaps = 10/374 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REWKN+C RWD+++V++ + L P GI WP +++G+ SFKLEHLS N
Sbjct: 110 LFWRNLIDPYAREWKNHCGRWDILDVVRMTHALRPEGIEWPKRDDGQTSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIA----RPFF 116
L H AHDALSDVRAT+ LARLIR P+LF F L+L KK V +E+G +A +PF
Sbjct: 170 LVHAAAHDALSDVRATIALARLIREKQPKLFEFCLALHKKDRVASEMGMHLAASERQPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ + ++WP+ HP NKN ++ W+ +DP++ D + IR + +K +
Sbjct: 230 HVSGMFPAERGCLGVVWPLATHPSNKNEILVWDCAYDPRELFSLDADTIRARMFTRKEAM 289
Query: 177 KED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E +P+ +HLN+SP+++ NLK LS + + DL A N + A++ N IW
Sbjct: 290 PEGMTRLPVKSVHLNKSPMLVGNLKTLSPAMAAHWGIDLEAARANAQLAATAPNMETIWA 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F +N + L++DE+LYN F+S D L LR +P KL+ F +++L+EL
Sbjct: 350 DVFQRPGVN---VALDVDEDLYNGFVSNDDRRLLESLRRDTPAKLAAARPSFADERLQEL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF +TLS E RW+++R +R ++ I M + EI+ L + +E +I
Sbjct: 407 LFRYRARNFPQTLSVAESLRWEQHRAARLFDGDAGARTIEMLFTEIDVLSESVDERGEEI 466
Query: 354 LNALLMYGKSITQK 367
L L Y + + +
Sbjct: 467 LGELYDYAEIVAPQ 480
>gi|120611894|ref|YP_971572.1| exonuclease I [Acidovorax citrulli AAC00-1]
gi|120590358|gb|ABM33798.1| Exodeoxyribonuclease I subunit C [Acidovorax citrulli AAC00-1]
Length = 478
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 224/372 (60%), Gaps = 11/372 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PS KLEHLS N
Sbjct: 108 MFWRNLIDPYAREWQNECGRWDLLDVVRLTYALRPDGIEWPRKEDGSPSLKLEHLSRANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR PRLF F L LR+K V AE+ P ARPF
Sbjct: 168 LVHEAAHDALSDVRATIALARLIRERQPRLFEFALGLRRKDRVAAELRLPATADTARPFL 227
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + + ++WP+ HP N+N LI W+L HDP + D +IR+ L +
Sbjct: 228 HVSGMFPADRGCLGILWPLASHPTNRNELIAWDLAHDPSELAGLDAARIRERLFTRTADL 287
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ N+ L+ + R+ D+ A + + A ++ + + IW
Sbjct: 288 PEGVARLPVKSVHLNKSPMVVGNVNTLTPAMAQRWGIDVERAAAHAELARALPDMSAIWA 347
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F + +D +D++LY F+ +D +L LR++ P++L+ F++++LEEL
Sbjct: 348 EVFARPREAPAD----VDQDLYGGFVGNEDRRRLQRLRTLPPQELALARPGFDDERLEEL 403
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+ +RARNF ETL + +RW+ R++R + + + +++L + A+E I
Sbjct: 404 AWRFRARNFPETLDEADRERWEALRVARLMEGEGGGLTFDALFARLDTLGETADERGEAI 463
Query: 354 LNALLMYGKSIT 365
L AL Y +SI
Sbjct: 464 LGALYEYAESIA 475
>gi|326316823|ref|YP_004234495.1| exodeoxyribonuclease I [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373659|gb|ADX45928.1| Exodeoxyribonuclease I [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 478
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 223/372 (59%), Gaps = 11/372 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PS KLEHLS N
Sbjct: 108 MFWRNLIDPYAREWQNECGRWDLLDVVRLTYALRPDGIEWPRKEDGSPSLKLEHLSRANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARLIR P+LF F L LR+K V AE+ P ARPF
Sbjct: 168 LVHEAAHDALSDVRATIALARLIRQRQPKLFEFALGLRRKDRVAAELRLPATADTARPFL 227
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+ + MF + + ++WP+ HP N+N LI W+L HDP + D +IR+ L +
Sbjct: 228 HASGMFPADRGCLGILWPLASHPTNRNELIAWDLAHDPSELAGLDAARIRERLFTRTADL 287
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ N+ L+ + R+ D+ A + + A ++ + + IW
Sbjct: 288 PEGVARLPVKSVHLNKSPMVVGNVNTLTPAMAQRWGIDMERAAAHAEIARALPDMSAIWA 347
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F K D ++D++LY F+ +D +L LR++ P++L+ F++++LEEL
Sbjct: 348 EVFARPK----DAPADVDQDLYGGFVGNEDRRRLQRLRTLPPQELALARPGFDDERLEEL 403
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+ +RARNF ETL + +RW+ R++R + + + +++L + A+E I
Sbjct: 404 AWRFRARNFPETLDEADRERWEALRVARLMEGEGGGLTFDALFARLDTLGETADERGEAI 463
Query: 354 LNALLMYGKSIT 365
L AL Y +SI
Sbjct: 464 LGALYEYAESIA 475
>gi|171059394|ref|YP_001791743.1| exonuclease I [Leptothrix cholodnii SP-6]
gi|170776839|gb|ACB34978.1| Exodeoxyribonuclease I [Leptothrix cholodnii SP-6]
Length = 484
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 223/374 (59%), Gaps = 12/374 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ Y L P GI WP ++G+PSFKLEHL+ N
Sbjct: 110 LFWRNLIDPYAREWQNECGRWDLLDVVRCCYALRPDGIQWPRHDDGRPSFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEI--GWPIARPFFYI 118
+SH+ AHDALSDVRAT+ LARLI+N P+LF+F L LRKK VLAEI RPF +I
Sbjct: 170 ISHEGAHDALSDVRATIALARLIKNARPKLFDFCLRLRKKDAVLAEIEGAQRQGRPFLHI 229
Query: 119 THMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
+ M+ + ++++WP+ HP NKN +I W+L DP + D IR L K + E
Sbjct: 230 SGMYGPERGCLAIVWPLAPHPTNKNEIIVWDLAEDPGELFTLDAEAIRARLFVKASELPE 289
Query: 179 DI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCAS-SILNNTYIWKK 234
+ PI IH+N+SP+VI+ LK L + + R+ D + A + + A+ IW +
Sbjct: 290 GVGRLPIKSIHINKSPVVIAQLKTLGAEMAQRWGIDKDQALHHAELAARKGATMAGIWPE 349
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+F ++DE+LY FI + D L +R+++P+KL++ F + +L+EL+
Sbjct: 350 VFARPAAAEPP---DVDEDLYGGFIGQDDRRTLQRVRALAPEKLADKLPTFNDPRLDELL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL---LKKANEHDT 351
+RARNF +TL +E RW+++ R ++ + F+ I++L L + +E
Sbjct: 407 LRWRARNFPQTLRDEERARWERHCARRLHDGAGGAMTLAAFFERIDTLGEALPEDDERGP 466
Query: 352 KILNALLMYGKSIT 365
+IL AL Y + I
Sbjct: 467 EILGALYDYAEQIA 480
>gi|221066347|ref|ZP_03542452.1| Exodeoxyribonuclease I [Comamonas testosteroni KF-1]
gi|220711370|gb|EED66738.1| Exodeoxyribonuclease I [Comamonas testosteroni KF-1]
Length = 479
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 216/371 (58%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL +PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLE L+ N
Sbjct: 109 MFWRNLTDPYAREWQNGCGRWDLLDVVRMVYALRPDGIQWPTKEDGTPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H++AHDALSDVRAT+ LARLIR PRLF+F L KK L E+G P ARPF
Sbjct: 169 LLHEQAHDALSDVRATIALARLIREKQPRLFDFAFGLHKKDGALREMGLPATQEHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
++T M S +++MWP+ HP NKN +I W+L DP + I +R L ++
Sbjct: 229 HVTGMISPARGCLAVMWPLATHPTNKNEVICWDLAADPTELSGISIEDLRLRLFTRQAEL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IH+N+SP+V+ +LK LS + ++ D+ A ++ A + + + WK
Sbjct: 289 PEGVSRLPIKSIHVNKSPMVVGSLKTLSPAMAEKWGVDMELAMRHAAMARDLPDMSAQWK 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + L+ D++LY F+ +D +L ++ +SP++L+ F++ +L EL
Sbjct: 349 AVF----TREAGEPLDADQDLYGGFVGNEDRRRLERIKRLSPQELALDKTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
++ YRARNF +TL E +RW+++R + + + I+SL + A+E +I
Sbjct: 405 VWRYRARNFPQTLDAGEQQRWEQHRAACLIEGQGGARTAEQMFAMIDSLSEAADERAEEI 464
Query: 354 LNALLMYGKSI 364
L L Y ++
Sbjct: 465 LGELYDYADAM 475
>gi|299529972|ref|ZP_07043399.1| exonuclease I [Comamonas testosteroni S44]
gi|298721952|gb|EFI62882.1| exonuclease I [Comamonas testosteroni S44]
Length = 479
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 217/371 (58%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSF+LE L+ N
Sbjct: 109 MFWRNLIDPYAREWQNGCGRWDLLDVVRMVYALRPEGIQWPTKEDGTPSFRLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H++AHDALSDVRAT+ LARLIR PRLF+F L KK L E+G P ARPF
Sbjct: 169 LLHEQAHDALSDVRATIALARLIREKQPRLFDFAFGLHKKDGALREMGLPATQEHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
++T M S + +MWP+ HP NKN +I W+L DP + I ++R L ++
Sbjct: 229 HVTGMISPARGCLGVMWPLATHPTNKNEVICWDLAADPAELSGISIEELRLRLFTRQAEL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IH+N+SP+V+ +LK LS + ++ D+ A ++ A + + + WK
Sbjct: 289 PEGVSRLPIKSIHVNKSPMVVGSLKTLSPAMAEKWGVDMELAMQHAAIARDLPDMSAQWK 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + L+ D++LY F+ +D +L ++ +SP++L+ F++ +L EL
Sbjct: 349 SVF----TREAGEPLDADQDLYGGFVGNEDRRRLERIKRLSPQELALDKTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
++ YRARNF +TL E +RW+++R + + + I++L + +E +I
Sbjct: 405 VWRYRARNFPQTLDADEQQRWEQHRAACLIEGQGGARTAEQMFSMIDALSESVDERGEEI 464
Query: 354 LNALLMYGKSI 364
L L YG ++
Sbjct: 465 LGDLYDYGSNL 475
>gi|264679055|ref|YP_003278962.1| exonuclease-like protein [Comamonas testosteroni CNB-2]
gi|262209568|gb|ACY33666.1| Exonuclease-like protein [Comamonas testosteroni CNB-2]
Length = 479
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 216/371 (58%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSF+LE L+ N
Sbjct: 109 MFWRNLIDPYAREWQNGCGRWDLLDVVRMVYALRPEGIQWPTKEDGTPSFRLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H++AHDALSDVRAT+ LARLIR PRLF+F L KK L E+G P ARPF
Sbjct: 169 LLHEQAHDALSDVRATIALARLIREKQPRLFDFAFGLHKKDGALREMGLPATQEHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
++T M S + +MWP+ HP NKN +I W+L DP + I ++R L ++
Sbjct: 229 HVTGMISPARGCLGVMWPLATHPTNKNEVICWDLAADPAELSGISIEELRLRLFTRQAEL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IH+N+SP+V+ +LK LS + ++ D+ A ++ A + + + WK
Sbjct: 289 PEGVTRLPIKSIHVNKSPMVVGSLKTLSPAMAEKWGVDMELAMQHAAIARDLPDMSAQWK 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + L+ D++LY F+ +D +L ++ +SP++L+ F++ +L EL
Sbjct: 349 AVF----TREAGEPLDADQDLYGGFVGNEDRRRLERIKRLSPQELALDKTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+ YRARNF +TL EL RW+++R + + + I++L + +E +I
Sbjct: 405 AWRYRARNFPQTLDAGELLRWEQHRAACLIEGQGGARTAEQMFTMIDALSESVDERGEEI 464
Query: 354 LNALLMYGKSI 364
L L YG ++
Sbjct: 465 LGDLYDYGSNL 475
>gi|418531163|ref|ZP_13097080.1| exonuclease I [Comamonas testosteroni ATCC 11996]
gi|371451665|gb|EHN64700.1| exonuclease I [Comamonas testosteroni ATCC 11996]
Length = 479
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 216/371 (58%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL +PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLE L+ N
Sbjct: 109 MFWRNLTDPYAREWQNGCGRWDLLDVVRMVYALRPDGIHWPTKEDGTPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H++AHDALSDVRAT+ LARLIR PRLF+F L KK L E+G P ARPF
Sbjct: 169 LLHEQAHDALSDVRATIALARLIREKQPRLFDFAFGLHKKDGALREMGLPATQEHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
++T M S +++MWP+ HP NKN +I W+L DP + I +R L ++
Sbjct: 229 HVTGMISPARGCLAVMWPLATHPTNKNEVICWDLAADPSELSGISIEDLRLRLFTRQAEL 288
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + PI IH+N+SP+V+ +LK LS + ++ D+ A ++ A + + + WK
Sbjct: 289 PEGVSRLPIKSIHVNKSPMVVGSLKTLSPAMAEKWGVDMELAMQHAAIARDLPDMSAQWK 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + L+ D++LY F+ +D +L ++ +SP++L+ F++ +L EL
Sbjct: 349 AVF----TREAGEPLDADQDLYGGFVGNEDRRRLERIKRLSPQELALDKTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
++ YRARNF +TL E +RW+++R + + + I++L + A+E +I
Sbjct: 405 VWRYRARNFPQTLDAGEQQRWEQHRAACLIEGQGGARTAEQMFAMIDTLSETADERAEEI 464
Query: 354 LNALLMYGKSI 364
L L Y ++
Sbjct: 465 LGELYDYADAM 475
>gi|333914934|ref|YP_004488666.1| exodeoxyribonuclease I [Delftia sp. Cs1-4]
gi|333745134|gb|AEF90311.1| Exodeoxyribonuclease I [Delftia sp. Cs1-4]
Length = 479
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 221/375 (58%), Gaps = 11/375 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLE L+ N
Sbjct: 109 MFWRNLIDPYAREWQNGCGRWDLLDVVRMVYALRPEGIVWPKKEDGSPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H+KAHDALSDVRAT+GLARLIR PRLF+F SL KK VL E+G P ARPF
Sbjct: 169 LLHEKAHDALSDVRATIGLARLIRKVQPRLFDFAFSLHKKDRVLQEMGLPAEPAHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ M + I++MWP+ HP NKN +I W+L DP + D++ +R L +
Sbjct: 229 HVSGMIRPERGCIAVMWPLATHPTNKNEIICWDLAQDPSELASIDVDTLRLRLFSRAADL 288
Query: 177 KED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E +PI IH+N+SP+V+ +LK LS + ++ D+ + A + + + +W+
Sbjct: 289 PEGMQRLPIKSIHVNKSPMVVGSLKTLSPAMAAQWGIDVEQCMGHAAIARDLPDMSALWR 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ + L+ D++LY F+ +D +L LRS+S ++L+ F++ +L EL
Sbjct: 349 AVHQ----RPAQEGLDADQDLYGGFVGNEDRRRLNHLRSLSAQELALDRTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF +L+ E +RW ++ + + K + ++ L + A+E +I
Sbjct: 405 LFRYRARNFPASLNPAERQRWLQHCAACLIDGKGGARTAEQMFAMVDQLSETADERGEEI 464
Query: 354 LNALLMYGKSITQKI 368
L AL Y ++I ++
Sbjct: 465 LGALYDYAEAIMPEV 479
>gi|160898944|ref|YP_001564526.1| exonuclease I [Delftia acidovorans SPH-1]
gi|160364528|gb|ABX36141.1| Exodeoxyribonuclease I [Delftia acidovorans SPH-1]
Length = 479
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 221/375 (58%), Gaps = 11/375 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ Y L P GI WP K +G PSFKLE L+ N
Sbjct: 109 MFWRNLIDPYAREWQNGCGRWDLLDVVRMVYALRPEGIVWPKKEDGSPSFKLEDLARANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L H+KAHDALSDVRAT+GLARLIR PRLF+F SL KK VL E+G P ARPF
Sbjct: 169 LLHEKAHDALSDVRATIGLARLIRKVQPRLFDFAFSLHKKDRVLQEMGLPAEPAHARPFL 228
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ M + I++MWP+ HP NKN +I W+L DP + D++ +R L +
Sbjct: 229 HVSGMIRPERGCIAVMWPLATHPTNKNEIICWDLAQDPSELASIDVDTLRLRLFSRAADL 288
Query: 177 KED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E +PI IH+N+SP+V+ +LK LS+ + ++ D+ + A + + + +W+
Sbjct: 289 PEGMQRLPIKSIHVNKSPMVVGSLKTLSAAMAAQWGIDVEQCMGHAAIARDLPDMSALWR 348
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ + L+ D++LY F+ +D +L LRS+S ++L+ F++ +L EL
Sbjct: 349 AVHQ----RPAQEGLDADQDLYGGFVGNEDRRRLNHLRSLSAQELALDRTGFDDARLTEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF +L+ E +RW ++ + K + ++ L + A+E +I
Sbjct: 405 LFRYRARNFPASLNPAERQRWLQHCAACLIEGKGGARTAEQMFAMVDQLSETADERGEEI 464
Query: 354 LNALLMYGKSITQKI 368
L AL Y ++I ++
Sbjct: 465 LGALYDYAEAIMPEL 479
>gi|375105398|ref|ZP_09751659.1| exonuclease I [Burkholderiales bacterium JOSHI_001]
gi|374666129|gb|EHR70914.1| exonuclease I [Burkholderiales bacterium JOSHI_001]
Length = 475
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 227/371 (61%), Gaps = 9/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNL++PY REW+N C RWDL++V++ + L P GI WP ++GKPSFKLEHL+ N
Sbjct: 110 LFWRNLMDPYAREWQNQCGRWDLLDVVRCTWALRPEGIEWPQHDDGKPSFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
LSH+ AHDALSDVRAT+ LA+L++ PRL++F L LR+K V+ E+G + RPF +I+
Sbjct: 170 LSHEAAHDALSDVRATIALAKLVKTRQPRLWDFCLKLRQKNAVVDEMG--VGRPFLHISG 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ ++ ++L+WP+ HP N+N +I W+L DP+ + +R+ L + E +
Sbjct: 228 MYGAERGCMALVWPLAPHPTNRNEVIVWDLAQDPQVLFELNAATVRERLFTRAEDLPEGV 287
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN-TYIWKKIF 236
PI IH+N+SPIV++NLK+++ R+ +L K + + +W ++F
Sbjct: 288 TRLPIKTIHINKSPIVVANLKIVTPQTAQRFNLNLEQGLLRAKALEARGHTLAGLWPEVF 347
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ ++DE+LY F+ +D L LRS+SP++L+ + F + +L+E++F
Sbjct: 348 ---DRPAAPTPPDVDEDLYGEFVGNEDRRVLQRLRSLSPQELAERHPAFTDPRLDEMLFR 404
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
+RARNF +TL+ E +RW R +R + + ++ F+ I++L + A+E +L A
Sbjct: 405 FRARNFPDTLNGDEQQRWHALRHARLHEGAHGGLSLQAFFDGIDTLGENADERGQDLLGA 464
Query: 357 LLMYGKSITQK 367
L Y +SI +
Sbjct: 465 LYDYAESIAPE 475
>gi|347821590|ref|ZP_08875024.1| exonuclease I [Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 484
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 219/378 (57%), Gaps = 15/378 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW+N C RWDL++V++ + L P GITWP + +GKPSF+L LS N
Sbjct: 110 MFWRNLIDPYAREWQNQCGRWDLLDVVRMTHALRPDGITWPRQEDGKPSFRLGDLSRANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L H+ AHDALSDVRAT+ LARL+R +N +LF+F L L KK V AE+ P +ARPF
Sbjct: 170 LLHEAAHDALSDVRATIALARLVREHNAKLFDFALGLHKKDRVAAELRLPTSAAVARPFL 229
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF + +++MWP+ HP+NKN LI W+L DP L ++IR L K ++
Sbjct: 230 HVSGMFPVERGCLAVMWPLANHPVNKNELIAWDLSQDPAALLTLGADEIRLRLFTKADAL 289
Query: 177 KED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E +PI I LNRSP+V+ N+ L+ L R+ DL A ++ + A ++ + + IW
Sbjct: 290 PEGLTRLPIKTIRLNRSPMVVGNVNTLTPALAQRWGIDLAQAAQHAEGARALPDMSAIWP 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRS----MSPKKLSNVNFCFENKK 289
+F + D +D++LY F+ D L LRS M + + F++ +
Sbjct: 350 AVFARAPEPDPD----VDQDLYGGFVGNNDRRLLNDLRSSAATMGGGQGAKPRAGFDDPR 405
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH 349
L EL + YRARNF TLS +E RW +R + ++ + F+ EI++L A+E
Sbjct: 406 LAELFWRYRARNFPGTLSPEETGRWDAHRAACLFHGAGGARTVEQFFAEIDALSDTADER 465
Query: 350 DTKILNALLMYGKSITQK 367
IL L Y + I +
Sbjct: 466 AQGILGTLYDYAEHIAPE 483
>gi|383757070|ref|YP_005436055.1| exodeoxyribonuclease I SbcB [Rubrivivax gelatinosus IL144]
gi|381377739|dbj|BAL94556.1| exodeoxyribonuclease I SbcB [Rubrivivax gelatinosus IL144]
Length = 480
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 213/363 (58%), Gaps = 11/363 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +G+PSFKLEHL+ N
Sbjct: 110 LFWRNLIDPYAREWQNGCGRWDLLDVVRCCWALRPEGIEWPKHEDGRPSFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+ LARLIR PRL++F L LR K V AEIG + RPF +++
Sbjct: 170 LAHEAAHDALSDVRATIALARLIRQRQPRLWDFCLKLRHKDAVRAEIG--VGRPFLHLSG 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---- 176
M+ ++ ++++WP+ HP N+N LI W+L DP + D +R L K
Sbjct: 228 MYGVENGCMAIVWPLAPHPTNRNELIVWDLAQDPAELASLDAETVRRRLYTKTEELAAAG 287
Query: 177 KEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN-TYIWKKI 235
+ +PI IHLN+SP+VI NLK L R+ DL A + + A+++ +W +
Sbjct: 288 ETRLPIKTIHLNKSPVVIGNLKTLGPA-RERWGLDLERALVHAERAAALGRTLEPLWSLV 346
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F +++DE+LY F+ +D +L LR + L++ F++ +L+EL+F
Sbjct: 347 FAKPAAGAP---VDVDEDLYGGFLGDEDRRQLQRLRGLDGAALASRRPAFDDPRLDELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARNF +TL +E +RW +R +R + + + I+ L + A E D +
Sbjct: 404 RYRARNFADTLDAEERERWAAHRHARLIDGAGGALTLQAYAERIDELAEAAAERDDERAQ 463
Query: 356 ALL 358
+LL
Sbjct: 464 SLL 466
>gi|121594205|ref|YP_986101.1| exonuclease I [Acidovorax sp. JS42]
gi|120606285|gb|ABM42025.1| Exodeoxyribonuclease I subunit C [Acidovorax sp. JS42]
Length = 479
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 234/376 (62%), Gaps = 13/376 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL++PY REW+N C RWDL++V++ Y L P GI WP + +GKPSF+LEHLS N
Sbjct: 108 MFWRNLMDPYAREWQNQCGRWDLLDVVRLTYALRPEGIEWP-EVDGKPSFRLEHLSKANG 166
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L+H+ AHDALSDVRAT+ LARLIR+ NPRLF+F LSL KK V AE+ P ARPF
Sbjct: 167 LAHEAAHDALSDVRATIALARLIRSRNPRLFDFALSLHKKDRVAAELRLPTTAQEARPFL 226
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN L+ W+L DP + ++IR L +
Sbjct: 227 HVSGMFPAERGCLAVMWPLASHPTNKNELLAWDLAQDPSELARLSADEIRTRLFTRAADL 286
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ NL L+ ++ R+ DL A + A ++ + T +W
Sbjct: 287 PEGVTRLPLKSVHLNKSPMVVGNLNTLTPDMAQRWGIDLPQAALHAAAARALPDLTAVWA 346
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F ++ L++D++LY F+ +D +L LR++ ++L++ F++ +L EL
Sbjct: 347 QVFQ----RPAEGPLDVDQDLYGGFVGNEDRRRLNRLRALPGEELAHERLGFDDARLAEL 402
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF TLS +E +RW+ +R++ + + + +++L +A++ T+
Sbjct: 403 VWRYRARNFPHTLSPEEQERWEAHRVAMLVEGEGGGLTFDALFERLDTLGAEADDERTEA 462
Query: 353 ILNALLMYGKSITQKI 368
IL A+ Y +SI +
Sbjct: 463 ILGAVYDYAESIAPGM 478
>gi|332526171|ref|ZP_08402306.1| exonuclease I [Rubrivivax benzoatilyticus JA2]
gi|332110011|gb|EGJ10639.1| exonuclease I [Rubrivivax benzoatilyticus JA2]
Length = 492
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 217/374 (58%), Gaps = 15/374 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +G+PSFKLEHL+ N
Sbjct: 123 LFWRNLIDPYAREWQNGCGRWDLLDVVRCCWALRPEGIEWPKHEDGRPSFKLEHLTAANG 182
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+ LARLIR PRL++F L LR K V EIG + RPF +++
Sbjct: 183 LAHEAAHDALSDVRATIALARLIRQRQPRLWDFCLKLRHKDAVRTEIG--VGRPFLHLSG 240
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---- 176
M+ ++ ++++WP+ HP N+N LI W+L DP + D +R + K
Sbjct: 241 MYGVENGCMAVVWPLAPHPTNRNELIVWDLAQDPAELASLDAETVRRRMYTKTEELAAAG 300
Query: 177 KEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN-TYIWKKI 235
+ +PI +HLN+SP+VI NLK L R+ DL A + + A+++ +W ++
Sbjct: 301 ETRLPIKTVHLNKSPVVIGNLKTLGP-ARERWGLDLERALVHAERAAALGRTLEPLWAQV 359
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F+ +++DE+LY F+ +D +L LR + L++ F++ +L+EL+F
Sbjct: 360 FVKPAAGGP---VDVDEDLYGGFLGDEDRRQLQRLRGLDGAALASRRPAFDDPRLDELLF 416
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--- 352
YRARNF +TL E +RW +R +R + + + I+ L + A E D +
Sbjct: 417 RYRARNFADTLDADERERWAAHRHARLIAGAGGVLTLQAYAERIDELAEAAAERDDERAQ 476
Query: 353 -ILNALLMYGKSIT 365
IL AL + + +
Sbjct: 477 SILEALYDWAEQVA 490
>gi|187930471|ref|YP_001900958.1| exonuclease I [Ralstonia pickettii 12J]
gi|187727361|gb|ACD28526.1| Exodeoxyribonuclease I [Ralstonia pickettii 12J]
Length = 479
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 222/373 (59%), Gaps = 16/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +G+PSFKLEHLS N
Sbjct: 111 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPEGIQWPTHEDGRPSFKLEHLSKANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDA+SDVRAT+ LARLIRN PRLF+F L+LRKK V+AEIG RP +I+
Sbjct: 171 LVHEAAHDAVSDVRATIALARLIRNAQPRLFDFCLALRKKDRVVAEIG-DAPRPLLHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN LI W+L DP + D+ IR+ + + E
Sbjct: 230 MYGVERGCMAVVWPLGGHPANKNELIVWDLAFDPSELFHMDVATIRERMFTRTADLAEGT 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVISN+K L R+ D ++ A + W++++
Sbjct: 290 TRLPIKSIHINKSPIVISNMKTLQPAQAERWGIDFAMIERHAAIAQGAPDMRETWRQVYA 349
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 350 ------RELEPIEDVDQNLYGGFVGNDDRRLLNELRTLSGEQLARLHAEFADARLPELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH-DTK-- 352
YRARNF +TL+ +E +RW++ R R + ++ F ++ L +A E+ DT+
Sbjct: 404 RYRARNFPDTLNEEEYERWEQLRAERLFEGRDGYMTFETFGERLQQLGAEAAENGDTRAQ 463
Query: 353 -ILNALLMYGKSI 364
IL L Y + I
Sbjct: 464 TILQDLYDYAQQI 476
>gi|309780540|ref|ZP_07675287.1| exodeoxyribonuclease I [Ralstonia sp. 5_7_47FAA]
gi|404395139|ref|ZP_10986942.1| hypothetical protein HMPREF0989_01922 [Ralstonia sp. 5_2_56FAA]
gi|308920695|gb|EFP66345.1| exodeoxyribonuclease I [Ralstonia sp. 5_7_47FAA]
gi|348615436|gb|EGY64954.1| hypothetical protein HMPREF0989_01922 [Ralstonia sp. 5_2_56FAA]
Length = 479
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 222/373 (59%), Gaps = 16/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +G+PSFKLEHLS N
Sbjct: 111 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPEGIQWPTHEDGRPSFKLEHLSKANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDA+SDVRAT+ LARLIRN PRLF+F L+LRKK V+AEIG RP +I+
Sbjct: 171 LVHEAAHDAVSDVRATIALARLIRNAQPRLFDFCLALRKKDRVVAEIG-DAPRPLLHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN LI W+L DP + D+ IR+ + + E
Sbjct: 230 MYGVERGCMAVVWPLGGHPTNKNELIVWDLAFDPSELFDMDVATIRERMFTRTADLAEGT 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVISN+K L R+ D ++ A + W++++
Sbjct: 290 TRLPIKSIHINKSPIVISNMKTLQPAQAERWGIDFATIERHAAIAQGAPDMRETWRQVYA 349
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ +D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 350 ------RELEAIEDVDQNLYGGFVGNEDRRLLNELRTLSGEQLARLHAEFADARLPELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH-DTK-- 352
YRARNF +TL+ +E + W++ R R + ++ F ++ L +A E+ DT+
Sbjct: 404 RYRARNFPDTLNEEEYELWEQLRAERLFEGRDGYMTFETFGERLQQLGAEAEENGDTRAQ 463
Query: 353 -ILNALLMYGKSI 364
IL L Y + I
Sbjct: 464 TILQDLYDYAQQI 476
>gi|222110882|ref|YP_002553146.1| exonuclease i [Acidovorax ebreus TPSY]
gi|221730326|gb|ACM33146.1| Exodeoxyribonuclease I [Acidovorax ebreus TPSY]
Length = 479
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 232/376 (61%), Gaps = 13/376 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL++PY REW+N C RWDL++V++ Y L P GI WP + +GKPSF+LEHLS N
Sbjct: 108 MFWRNLMDPYAREWQNQCGRWDLLDVVRLTYALRPEGIEWP-EVDGKPSFRLEHLSQANG 166
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPI----ARPFF 116
L+H AHDALSDVRAT+ LARLIR+ NPRLF+F LSL KK V AE+ P ARPF
Sbjct: 167 LAHDAAHDALSDVRATIALARLIRSRNPRLFDFALSLHKKDRVAAELRLPTTAQEARPFL 226
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN L+ W+L DP + ++IR L +
Sbjct: 227 HVSGMFPTERGCLAVMWPLASHPTNKNELLAWDLAQDPSELARLSADEIRTRLFTRAADL 286
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ NL L+ + R+ DL A + A ++ + T +W
Sbjct: 287 PEGVTRLPLKSVHLNKSPMVVGNLNTLTPAMAQRWGIDLPQAALHAAAARALPDLTAVWA 346
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F ++ L++D++LY F+ +D +L LR++ ++L++ F++ +L EL
Sbjct: 347 QVFQ----RPAEGPLDVDQDLYGGFVGNEDRRRLNRLRALPGEELAHERLGFDDARLAEL 402
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF TLS +E +RW+ +R++ + + + +++L +A++ T+
Sbjct: 403 VWRYRARNFPHTLSPEEQERWEAHRMAVLVEGEGGGLTFDALFERLDTLGAEADDERTEA 462
Query: 353 ILNALLMYGKSITQKI 368
IL A+ Y +SI +
Sbjct: 463 ILGAVYDYAESIAPGM 478
>gi|241664639|ref|YP_002982999.1| exonuclease I [Ralstonia pickettii 12D]
gi|240866666|gb|ACS64327.1| Exodeoxyribonuclease I [Ralstonia pickettii 12D]
Length = 479
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 221/373 (59%), Gaps = 16/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +G+PSFKLEHLS N
Sbjct: 111 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPEGIQWPTHEDGRPSFKLEHLSKANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDA+SDVRAT+ LARLIRN PRLF+F L+LRKK V AEIG RP +I+
Sbjct: 171 LVHEAAHDAVSDVRATIALARLIRNAQPRLFDFCLALRKKDRVAAEIG-DAPRPLLHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN LI W+L DP + D+ IR+ + + E
Sbjct: 230 MYGVERGCMAVVWPLGGHPTNKNELIVWDLAFDPSELFDMDVATIRERMFTRAADLAEGT 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVISN+K L R+ D ++ A + W++++
Sbjct: 290 TRLPIKSIHINKSPIVISNMKTLQPGQAERWGIDFATIERHAAIAQGAPDMRETWRQVYA 349
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ +D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 350 ------RELEPIEDVDQNLYGGFVGNEDRRLLNELRTLSGEQLARLHAEFADARLPELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH-DTK-- 352
YRARNF +TL+ +E + W++ R R + ++ F ++ L +A E+ DT+
Sbjct: 404 RYRARNFPDTLNEEEYELWEQLRAERLFEGRDGYMTFETFGERLQQLGAEAEENGDTRAQ 463
Query: 353 -ILNALLMYGKSI 364
IL L Y + I
Sbjct: 464 TILQDLYDYAQQI 476
>gi|319762823|ref|YP_004126760.1| exodeoxyribonuclease I [Alicycliphilus denitrificans BC]
gi|330824902|ref|YP_004388205.1| exodeoxyribonuclease I [Alicycliphilus denitrificans K601]
gi|317117384|gb|ADU99872.1| Exodeoxyribonuclease I [Alicycliphilus denitrificans BC]
gi|329310274|gb|AEB84689.1| Exodeoxyribonuclease I [Alicycliphilus denitrificans K601]
Length = 478
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 233/376 (61%), Gaps = 13/376 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL++PY REW+N C RWDL++V++ Y L P GI WP + GK SF+LE+L+ N
Sbjct: 108 MFWRNLMDPYAREWQNQCGRWDLLDVVRLAYALRPDGIEWPVAD-GKTSFRLENLTKANG 166
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP----IARPFF 116
L+H+ AHDALSDVRAT+ LARL+R NPRLF+F L LRKK V AE+ P ARPF
Sbjct: 167 LAHEAAHDALSDVRATIALARLVRARNPRLFDFALGLRKKDRVAAELRLPATAQTARPFL 226
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+++ MF ++ +++MWP+ HP NKN L+ W+L HDP + ++IR L +
Sbjct: 227 HVSGMFGAERGCLAVMWPLASHPTNKNELLAWDLAHDPAELATLSADEIRQRLFTRAADL 286
Query: 177 KEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E + P+ +HLN+SP+V+ N+ L+ + R+ D+ A ++ + A + + + IW
Sbjct: 287 PEGVTRLPLKSVHLNKSPMVVGNVNTLTPAVAQRWGLDMAQAARHAEAARRLPDMSAIWA 346
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++F + +++D++LY F+ +D +L LR++SP++L+ F++++L EL
Sbjct: 347 QVFQ----RPQEGPVDVDQDLYGGFLGNEDRRRLNRLRALSPEELARERPGFDDERLAEL 402
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARNF +TLS +E +RW+ +R++ + + + ++ L ++A++ T+
Sbjct: 403 VWRYRARNFPQTLSPEEHERWEAHRVAMLVEGEGGGLTFDALFERLDELGEQADDERTEA 462
Query: 353 ILNALLMYGKSITQKI 368
IL A+ Y + I +
Sbjct: 463 ILGAIYDYAEGIAPGM 478
>gi|344172825|emb|CCA85482.1| exodeoxyribonuclease I [Ralstonia syzygii R24]
Length = 479
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/347 (41%), Positives = 207/347 (59%), Gaps = 12/347 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP GKPSFKLEHLS N
Sbjct: 111 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPEGIEWPVNGEGKPSFKLEHLSQANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDA+SDVRAT+ LARLIRN PRLF+F L+LRKK VLAEIG RP +I+
Sbjct: 171 LLHEAAHDAVSDVRATIALARLIRNAQPRLFDFCLTLRKKDRVLAEIG-DAPRPLIHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ ++++WP+ HP NKN LI W+L DP + D+ IR+ + + E
Sbjct: 230 MYGVDRGCMAVVWPLGWHPTNKNELIVWDLSFDPSELFHMDVAAIRERMFTRSADLAEGT 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVI NLK L R+ DL + A + W++++
Sbjct: 290 TRLPIKSIHINKSPIVIGNLKTLQPAQAERWGVDLAVIEHHAGIAQGAPDLRETWRQVYA 349
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+S D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 350 ------RELEPIEDVDQNLYGGFVSNDDRRTLNELRTLSGEQLARLHPDFADARLPELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
YRARNF +TL+ +E ++W++ R R + + + F IE L
Sbjct: 404 RYRARNFPDTLTEEEYEQWEQLRAERLFEGREGYLTFDAFGERIEQL 450
>gi|299065319|emb|CBJ36488.1| exodeoxyribonuclease I [Ralstonia solanacearum CMR15]
Length = 477
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 221/376 (58%), Gaps = 16/376 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP ++GKPSFKLEHLS N
Sbjct: 109 LFWRNLIDPYAREWQNTCGRWDLLDVVRTTWALRPDGVEWPKNDDGKPSFKLEHLSQANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R PRLF+F +LRKK+ VLAEIG RP +I+
Sbjct: 169 LQHEAAHDALSDVRATIALARRVRTAQPRLFDFCFALRKKERVLAEIG-DAPRPLIHISG 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ ++++WP+ HP NKN LI W+L DP + D+ IR+ L + E
Sbjct: 228 MYGVDRGCMAVVWPLGWHPTNKNELIAWDLSFDPSELFHMDVAAIRERLFTRSADLTEGT 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVI NLK L R+ D ++ A + W++++
Sbjct: 288 TRLPIKSIHINKSPIVIGNLKTLQPAQAERWGVDFAAIERHAGIAQGAPDLRETWRQVYA 347
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ D L LR++S ++L+ ++ F + +L EL+
Sbjct: 348 ------RELEPIEDVDQNLYGGFVGNDDRRTLNELRTLSGEQLAQLHPDFADARLPELLL 401
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL-LKKANEHDTK-- 352
YRARNF +TL+ E ++W++ R R + ++ ++ + IE L + A++ D +
Sbjct: 402 RYRARNFPDTLTEDEHEQWEQLRAERLFEGRDGYLTLDAYAERIEQLAAEAADKGDARAE 461
Query: 353 -ILNALLMYGKSITQK 367
IL+AL Y + + +
Sbjct: 462 GILSALYDYAEMVAPE 477
>gi|344168306|emb|CCA80578.1| exodeoxyribonuclease I (modular protein) [blood disease bacterium
R229]
Length = 753
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 207/347 (59%), Gaps = 12/347 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +GKPSFKLEHLS N
Sbjct: 385 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGIEWPKNGDGKPSFKLEHLSQANG 444
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LARLIRN PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 445 LLHEAAHDALSDVRATIALARLIRNAQPRLFDFCFALRKKERVLAEIG-DAPRPLLHVSG 503
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + IR+ L + E
Sbjct: 504 MYGVERGCLAVVWPLGWHPTNKNELLVWDLACDPAELFDLGAEAIRERLFTRSAELAEGT 563
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 564 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFATIERHAAVAQGAPDMRETWRQVY- 622
Query: 238 DYKINNSDLE--LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+S D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 623 -----ARELEPIADVDQNLYGGFVSNDDRRTLNELRTLSGEQLARLHPDFADARLPELLF 677
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
YRARNF +TL+ +E ++W++ R R + + + F IE L
Sbjct: 678 RYRARNFPDTLTEEEYEQWEQLRAERLFEGREGYLTFDAFGERIEQL 724
>gi|224826521|ref|ZP_03699622.1| Exodeoxyribonuclease I [Pseudogulbenkiania ferrooxidans 2002]
gi|224601122|gb|EEG07304.1| Exodeoxyribonuclease I [Pseudogulbenkiania ferrooxidans 2002]
Length = 475
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 213/363 (58%), Gaps = 7/363 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL+++++A Y L P GI WP + G PSFKLEHLS N
Sbjct: 110 LFWRNLIDPYAREWQNQCGRWDLLDLVRATYALRPEGIEWPKHDTGLPSFKLEHLSAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+ LARLIR P+LF F L LRKK V ++ RP +++
Sbjct: 170 LAHEAAHDALSDVRATIALARLIRQRQPKLFEFYLGLRKKDAVRHQLSLHAPRPLLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ ++ ++++WP+ HP NKN +I W+L +DP + + IR L + + + +
Sbjct: 230 MYGAERGNLAVVWPLAEHPSNKNEVIVWDLAYDPAELRGLGPDTIRQRLFSRSDELPDGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI IH+N+SP V+SNL+VLS + DL+ ++ + A ++ N T +W+K++
Sbjct: 290 SRLPIKTIHINKSPFVVSNLRVLSDERADHWGIDLDAVTRHAETAQALPNLTSVWRKVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++DE LY F+S D +L LR++S +L+ F++ +L E +F Y
Sbjct: 350 ----RETGAPADVDENLYGGFVSNNDRRELTRLRTLSAVQLAGERPAFDDAQLSEQLFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +LS E +RW+ + S+ + + EI +L A+ +L A+
Sbjct: 406 RARNFPASLSAAEQERWQSWCRSKLIDGAIPGRHRAQCLEEIATLEATADARGQTLLAAI 465
Query: 358 LMY 360
+
Sbjct: 466 RQF 468
>gi|300690052|ref|YP_003751047.1| exodeoxyribonuclease I [Ralstonia solanacearum PSI07]
gi|299077112|emb|CBJ49735.1| exodeoxyribonuclease I [Ralstonia solanacearum PSI07]
Length = 489
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 207/347 (59%), Gaps = 12/347 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P GI WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGIEWPKNGDGKPSFKLEHLSQANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LARLIRN PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARLIRNAQPRLFDFCFALRKKERVLAEIG-DAPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + IR+ L + E
Sbjct: 240 MYGVERGCLAVVWPLGWHPTNKNELLVWDLACDPAELFDLGAEAIRERLFTRSAELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 ARLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFATIERHAAVAQGAPDMRETWRQVYA 359
Query: 238 DYKINNSDLE--LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+S D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 360 ------RELEPIADVDQNLYGGFVSNDDRRTLNELRTLSGEQLARLHPDFADARLPELLF 413
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
YRARNF +TL+ +E ++W++ R R + + + F IE L
Sbjct: 414 RYRARNFPDTLTEEEYEQWEQLRAERLFEGREGYLTFDAFGERIEQL 460
>gi|347539106|ref|YP_004846531.1| exodeoxyribonuclease I [Pseudogulbenkiania sp. NH8B]
gi|345642284|dbj|BAK76117.1| exodeoxyribonuclease I [Pseudogulbenkiania sp. NH8B]
Length = 475
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 213/363 (58%), Gaps = 7/363 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL+++++A Y L P GI WP + G PSFKLEHLS N
Sbjct: 110 LFWRNLIDPYAREWQNQCGRWDLLDLVRATYALRPEGIEWPKHDTGLPSFKLEHLSAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H+ AHDALSDVRAT+ LARLIR P+LF F L LRKK V ++ RP +++
Sbjct: 170 LAHEAAHDALSDVRATIALARLIRQRQPKLFEFYLGLRKKDAVRHQLSLHAPRPLLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ ++ ++++WP+ HP NKN +I W+L +DP + + IR L + + E +
Sbjct: 230 MYGAERGNLAVVWPLAEHPSNKNEVIVWDLAYDPAELRGLGPDTIRQRLFSRSDELPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI IH+N+SP V+SNL+VLS + DL+ ++ + A ++ N T +W+K++
Sbjct: 290 SRLPIKTIHINKSPFVVSNLRVLSDERADHWGIDLDAINRHAETAQALPNLTSVWRKVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++DE LY F+S D +L LR++S +L+ F++ +L E +F Y
Sbjct: 350 ----RETGAPADVDENLYGGFVSNNDRRELTRLRTLSAVQLAGERPAFDDAQLSEQLFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +LS E +RW+ + S+ + + EI +L A+ +L A+
Sbjct: 406 RARNFPASLSAAERERWQNWCRSKLIDGAIPGRHRAQCLEEIATLEATADARGQTLLAAI 465
Query: 358 LMY 360
+
Sbjct: 466 RQF 468
>gi|421890248|ref|ZP_16321166.1| exodeoxyribonuclease I [Ralstonia solanacearum K60-1]
gi|378964403|emb|CCF97914.1| exodeoxyribonuclease I [Ralstonia solanacearum K60-1]
Length = 489
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 222/374 (59%), Gaps = 12/374 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSQANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R+ PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIG-ETPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSAELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVY- 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D ++D+ LY F++ D L LR++S ++L+ ++ F + +L EL+F Y
Sbjct: 359 ---ARELDPIEDVDQNLYGGFVANGDRRTLNELRTLSGEQLARLHPDFADARLPELLFRY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL-LKKANEHDTK---I 353
RARNF +TL+ E ++W++ R R + ++ ++ + IE L + A++ D + I
Sbjct: 416 RARNFPDTLTEDESEQWEQLRAERLFEGRDGYLTLDGYTERIEQLAAEAADKGDARAEGI 475
Query: 354 LNALLMYGKSITQK 367
L AL Y + +T +
Sbjct: 476 LAALYDYAEMVTPE 489
>gi|161621731|ref|NP_521246.2| exonuclease I [Ralstonia solanacearum GMI1000]
Length = 477
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 207/347 (59%), Gaps = 12/347 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 109 LFWRNLIDPYAREWQNTCGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSQANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R PRLF+F +LRKK+ VLAEIG +RP +++
Sbjct: 169 LQHEAAHDALSDVRATIALARRVRAAQPRLFDFCFALRKKERVLAEIG-DASRPLLHVSG 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 228 MYGVERGCLAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSADLTEGT 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVI NLK L R+ D ++ A + W++++
Sbjct: 288 TRLPIKSIHINKSPIVIGNLKTLQPAQAERWGIDFAVIERHAGIAQGAPDLRETWRQVYA 347
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 348 ------RELEPIEDVDQNLYGGFVGNDDRRTLNELRTLSGEQLAQLHPDFADARLPELLF 401
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
YRARNF +TL+ +E ++W++ R R + + + F IE L
Sbjct: 402 RYRARNFPDTLTEEEYEQWEQLRAERLFEGREGYLTFDAFGERIEQL 448
>gi|17430149|emb|CAD16834.1| putative exodeoxyribonucleaseIprotein [Ralstonia solanacearum
GMI1000]
Length = 489
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 207/347 (59%), Gaps = 12/347 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNTCGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSQANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R PRLF+F +LRKK+ VLAEIG +RP +++
Sbjct: 181 LQHEAAHDALSDVRATIALARRVRAAQPRLFDFCFALRKKERVLAEIG-DASRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCLAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSADLTEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI IH+N+SPIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPIKSIHINKSPIVIGNLKTLQPAQAERWGIDFAVIERHAGIAQGAPDLRETWRQVYA 359
Query: 238 DYKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+LE ++D+ LY F+ D L LR++S ++L+ ++ F + +L EL+F
Sbjct: 360 ------RELEPIEDVDQNLYGGFVGNDDRRTLNELRTLSGEQLAQLHPDFADARLPELLF 413
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
YRARNF +TL+ +E ++W++ R R + + + F IE L
Sbjct: 414 RYRARNFPDTLTEEEYEQWEQLRAERLFEGREGYLTFDAFGERIEQL 460
>gi|421896006|ref|ZP_16326405.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum MolK2]
gi|206587171|emb|CAQ17755.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum MolK2]
Length = 489
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 215/371 (57%), Gaps = 12/371 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSKANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R+ PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIG-EAPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSAELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVY- 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D ++D+ LY F++ D L LR++S ++L+ ++ F + +L EL+F Y
Sbjct: 359 ---ARELDPIEDVDQNLYGGFVANGDRRTLNELRTLSGEQLARLHPDFADARLSELLFRY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANE-HDTK---I 353
RARNF +TL+ E ++W++ R R + F ++ L +A E DT+ I
Sbjct: 416 RARNFPDTLTEDEYEQWEQLRAERLFEGSGGYLTFEAFGERLQQLGAEAAESGDTRAQNI 475
Query: 354 LNALLMYGKSI 364
L L Y + I
Sbjct: 476 LQDLFDYAQQI 486
>gi|83746387|ref|ZP_00943439.1| Exodeoxyribonuclease I [Ralstonia solanacearum UW551]
gi|207744660|ref|YP_002261052.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum IPO1609]
gi|83726928|gb|EAP74054.1| Exodeoxyribonuclease I [Ralstonia solanacearum UW551]
gi|206596067|emb|CAQ62994.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum IPO1609]
Length = 489
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 213/371 (57%), Gaps = 12/371 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSKANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R+ PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIG-ETPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSAELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVY- 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ D ++D+ LY F++ D L LR++S ++L+ ++ F + +L EL+F Y
Sbjct: 359 ---VRELDPIEDVDQNLYGGFVANGDRRTLNELRTLSGEQLARLHPDFADARLPELLFRY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK----I 353
RARNF +TL+ E ++W++ R R + F ++ L +A E I
Sbjct: 416 RARNFPDTLTEDEYEQWEQLRAERLFEGSGGYLTFEAFGERLQQLGAEAAESGDARAQNI 475
Query: 354 LNALLMYGKSI 364
L L Y + I
Sbjct: 476 LQDLYDYAQQI 486
>gi|300702669|ref|YP_003744269.1| exodeoxyribonuclease I [Ralstonia solanacearum CFBP2957]
gi|299070330|emb|CBJ41622.1| exodeoxyribonuclease I [Ralstonia solanacearum CFBP2957]
Length = 489
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 212/371 (57%), Gaps = 12/371 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIDPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSQANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R+ PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIG-ETPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSAELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVY- 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D ++D+ LY F++ D L LR++S ++L+ ++ F + +L EL+F Y
Sbjct: 359 ---ARELDPIEDVDQNLYGGFVANGDRRTLNELRTLSGEQLARLHPDFADARLPELLFRY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK----I 353
RARNF +TL+ E ++W++ R R + F ++ L +A E I
Sbjct: 416 RARNFPDTLAEDEYEQWEQLRAERLFEGGGGYLTFEAFGERLQQLGAEAAESGDARAQNI 475
Query: 354 LNALLMYGKSI 364
L L Y + I
Sbjct: 476 LQDLFDYAQQI 486
>gi|121607268|ref|YP_995075.1| exonuclease I [Verminephrobacter eiseniae EF01-2]
gi|121551908|gb|ABM56057.1| Exodeoxyribonuclease I subunit C [Verminephrobacter eiseniae
EF01-2]
Length = 481
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 217/375 (57%), Gaps = 12/375 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGK-PSFKLEHLSFVN 59
MFWRNLI+PY REWKN C RWDL++V++ Y L P GI WP +G PSF+LE L N
Sbjct: 110 MFWRNLIDPYAREWKNQCGRWDLLDVVRMTYALRPDGIHWPRHEDGAAPSFRLEDLCRAN 169
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEI----GWPIARPF 115
L H+ AHDALSDVRAT+ LARLIR +N LF+F L L KK V AE+ G ARPF
Sbjct: 170 GLLHEAAHDALSDVRATIALARLIRQHNRPLFDFALGLHKKDRVAAELRLSGGAGTARPF 229
Query: 116 FYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS 175
+++ MF ++ +++MWP+ HP+NKN LI W+L HDP ++++R + + ++
Sbjct: 230 LHVSGMFPAERGCLAVMWPLAGHPVNKNELIAWDLAHDPAALATLGVDEMRLRMFTRTDA 289
Query: 176 FKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW 232
E + P+ IHLNRSP+V+ N+ L+ L R+ DL A ++ + A ++ + +W
Sbjct: 290 LPEGVTRLPVKTIHLNRSPMVVGNVNTLTPALARRWGIDLAQAAQHAQAARALPDMGRVW 349
Query: 233 KKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+F S+ ++D++LY F+ +D L LR+ + F++ +L E
Sbjct: 350 AAVF----ARPSEPAPDVDQDLYCGFVGDRDRRLLDDLRASAAGMNGKARVHFDDPRLVE 405
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK 352
L + YRARNF TL+ +E RW+ + +R ++ + F+ I+ L + A+E
Sbjct: 406 LFWRYRARNFPATLAPEEAGRWQAHCAARLFHGAGGARTVGQFHARIDELSETADERGQG 465
Query: 353 ILNALLMYGKSITQK 367
IL AL Y + I +
Sbjct: 466 ILGALYDYAEQIAPE 480
>gi|34496784|ref|NP_900999.1| exonuclease I [Chromobacterium violaceum ATCC 12472]
gi|34102639|gb|AAQ59004.1| exodeoxyribonuclease I [Chromobacterium violaceum ATCC 12472]
Length = 472
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 198/325 (60%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI+PY REW+N+C RWDL+++++A Y L P GI WP +G+ SFKLEHLS N
Sbjct: 110 LFWRNLIDPYAREWQNHCGRWDLLDLVRATYALRPDGIVWPKHEDGRTSFKLEHLSAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H AHDALSDVRAT+ LARLIR P+LF++ L+LRKK V ++ +P +++
Sbjct: 170 LAHASAHDALSDVRATIALARLIRQRQPKLFDYYLTLRKKDAVKVQLSLHDPKPVLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ + ++++WP+ HP N N +I W+L HDP + + IR + + + E +
Sbjct: 230 MYGVERGNLAVVWPLAAHPTNANEVIVWDLAHDPAELRGLSADDIRQRMFTRADELPEGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ IH+N+SP V++NLK L + R+ DL ++ + A ++ + + +W++++
Sbjct: 290 ARLPVKTIHINKSPFVVANLKALGDDNAARWGMDLAAIHRHAEAARALPDLSALWRRVYQ 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D +D+ LY F+S D L +R +S +L+ FE+ +L EL+F Y
Sbjct: 350 REAGEPQD----VDQNLYGGFVSNNDRKALQKMRRLSAAQLAGEMALFEDPQLAELLFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF +TLS E KRWK + +R
Sbjct: 406 RARNFPDTLSGDEQKRWKAWCQARL 430
>gi|386332028|ref|YP_006028197.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum Po82]
gi|334194476|gb|AEG67661.1| exodeoxyribonucleaseIprotein [Ralstonia solanacearum Po82]
Length = 489
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 211/371 (56%), Gaps = 12/371 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNLI PY REW+N C RWDL++V++ + L P G+ WP +GKPSFKLEHLS N
Sbjct: 121 LFWRNLIGPYAREWQNECGRWDLLDVVRTTWALRPDGVEWPKNGDGKPSFKLEHLSKANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LAR +R+ PRLF+F +LRKK+ VLAEIG RP +++
Sbjct: 181 LLHEAAHDALSDVRATIALARRVRDAQPRLFDFCFALRKKERVLAEIG-ETPRPLLHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + ++++WP+ HP NKN L+ W+L DP + ++ IR+ L + E
Sbjct: 240 MYGVERGCMAVVWPLGWHPTNKNELLVWDLACDPAELFDLGVDTIRERLFTRSVELAEGT 299
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+N++PIVI NLK L R+ D ++ A + W++++
Sbjct: 300 TRLPVKSIHINKAPIVIGNLKTLQPAQAERWGVDFAAIERHAAAAQGAPDMRETWRQVY- 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D ++D+ LY F++ D L LR++S ++L+ ++ F + +L EL+F Y
Sbjct: 359 ---ARELDPIEDVDQNLYGGFVANGDRRTLNELRALSGEQLARLHPDFADARLPELLFRY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK----I 353
RARNF +TL+ E ++W++ R R + F ++ L +A E I
Sbjct: 416 RARNFPDTLTEDEYEQWEQLRAERLFEGSGGYLTFEAFGERLQQLGAEAAESGDARAQNI 475
Query: 354 LNALLMYGKSI 364
L L Y + I
Sbjct: 476 LQDLYDYAQQI 486
>gi|319944538|ref|ZP_08018809.1| exodeoxyribonuclease I [Lautropia mirabilis ATCC 51599]
gi|319742251|gb|EFV94667.1| exodeoxyribonuclease I [Lautropia mirabilis ATCC 51599]
Length = 489
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 218/390 (55%), Gaps = 35/390 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ WR L PY+REW+N CSRWDL++V++A L P GI WP ++G+PSFKLEHLS N
Sbjct: 110 LLWRTLRPPYDREWRNGCSRWDLLDVVRATAALRPEGIEWPRHDDGRPSFKLEHLSAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H +AHDALSDVRAT+ LA LIRN PRL+NF L+LR+K+ VL EIG RPF +++
Sbjct: 170 LAHAQAHDALSDVRATIALAALIRNRQPRLWNFCLALRQKQAVLTEIG--SDRPFIHVSA 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ ++ ++++WP+ HP N+N LI W+L+HDP + D +IR L K E
Sbjct: 228 MYGAERGGMAVVWPLAQHPTNRNELIVWDLIHDPAELADLDAEQIRLRLFSKTEDLPEGM 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCA-------SSILNNTY 230
+PI + +N+SPIVI NLKVL+ ++ R+ D+ ++ + A +S ++ Y
Sbjct: 288 TRLPIRSLAINKSPIVIGNLKVLTPAVIERWHIDMETIARHTETARRLTPQLASRMDEVY 347
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNL----------KLAILRSMSP-KKLS 279
+ ++D +LY FI D A + SP S
Sbjct: 348 --------QRPRPQGPAPDVDGDLYGGFIGNDDRRRLDDWRERLDATASQAAASPDADHS 399
Query: 280 NVNF-CFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLE 338
++ FE+ +LEE+ F YRAR F + LS +E +RW + +R + N + F
Sbjct: 400 HIQIPSFEDPRLEEMSFRYRARQFPDMLSTEEKQRWVAHCHARLHQGAGNAMTLATFAHR 459
Query: 339 IESL---LKKANEHDTKILNALLMYGKSIT 365
++ L L +EH ++L AL YG+ +
Sbjct: 460 LDELNQSLSPDDEHGQRLLEALYDYGEQLA 489
>gi|359785845|ref|ZP_09288991.1| exonuclease I [Halomonas sp. GFAJ-1]
gi|359296795|gb|EHK61037.1| exonuclease I [Halomonas sp. GFAJ-1]
Length = 497
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 222/378 (58%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL++PY REW+N SRWDLI+V++AFY L P GI WP +++G PSFKLEHL+ N
Sbjct: 115 LFYRNLLDPYAREWQNGNSRWDLIDVVRAFYALRPAGIEWPLRDDGAPSFKLEHLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DVRAT+ LARL++ NP+LF+++L LR K+ V ++ P A+P +I+
Sbjct: 175 IAHEGAHDAVADVRATIALARLLKARNPKLFDYLLGLRGKRAVANQLDLPSAKPLLHISR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP + L +IR+ + K E
Sbjct: 235 RYPASRGCSALVMPLAEHPTNPNGVIVYDLSVDPSELLSMSAEQIRERVFVSKQDLSEGE 294
Query: 180 --IPISMIHLNRSPIV--ISNLKVLSSN-------LMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+NR P+V + LK + ++ R D++ ++ K ++ +
Sbjct: 295 TRIPLKVIHINRCPVVFPATALKDVEGPHKGEYGVIVERLGLDVDACRRHWK---TLRDA 351
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ + K+ + D + D LY +F S D ++ +R+M P L F F++
Sbjct: 352 SGVAHKVAEVFNSAYEDTPHDPDLMLYSGSFFSAADRQQMERVRAMEPWDLVGQRFAFQD 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA- 346
+LEE++F YRAR++ ETL +E ++W+ +R +R + + + F EIE +++
Sbjct: 412 PRLEEMLFRYRARSYPETLEGEEREQWEAFRWTRINDPVIAGFTLKAFAREIERYNQQSL 471
Query: 347 NEHDTKILNALLMYGKSI 364
+ + ++L L+MY +++
Sbjct: 472 TDRERQVLEELVMYVEAM 489
>gi|352104652|ref|ZP_08960467.1| exonuclease I [Halomonas sp. HAL1]
gi|350598775|gb|EHA14883.1| exonuclease I [Halomonas sp. HAL1]
Length = 497
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 216/378 (57%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL++PY REW+N SRWDLI+V++AFY L P GI WP + +G PSFKLEHL+ N
Sbjct: 115 LFYRNLLDPYSREWQNGNSRWDLIDVVRAFYALRPTGIEWPLREDGAPSFKLEHLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DVRAT+ LARL++ N +LF+++L LR K+ V ++ A+P +I+
Sbjct: 175 IAHEGAHDAVADVRATIALARLLKERNAKLFDYLLGLRGKRAVAKQLDLANAKPLLHISR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP L + +IRD + + E
Sbjct: 235 RYPASRGCSALVMPLAEHPTNPNGVIVYDLSIDPSDMLSMSVEQIRDRVFVSQQDLAEGD 294
Query: 180 --IPISMIHLNRSPIV--ISNLKVLS-------SNLMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+NR P+V S LK + +++ R D+ ++ K ++ +
Sbjct: 295 VRIPLKVIHINRCPVVFPASALKDVDGPQKGEYGSIVERLGLDVTACRQHWK---TLRDA 351
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ + +K+ + D + D LY +F S D ++ +R M P L F F++
Sbjct: 352 SGVAEKVAEVFNAGYEDAPQDPDLMLYSGSFFSAADRQQMERVREMEPWDLVGQRFAFQD 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA- 346
+LEE++F +RAR++ +TL +E ++W+ YR R + + + F EI ++
Sbjct: 412 PRLEEMLFRFRARSYPDTLEGEEREQWEAYRWMRINDPALAGFTLKAFAREIAQYNQQTL 471
Query: 347 NEHDTKILNALLMYGKSI 364
+ + +IL L+M+ +++
Sbjct: 472 TDRERQILEELVMFVEAM 489
>gi|338999206|ref|ZP_08637857.1| exonuclease I [Halomonas sp. TD01]
gi|338763943|gb|EGP18924.1| exonuclease I [Halomonas sp. TD01]
Length = 497
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 217/378 (57%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL++PY REW+N SRWDLI+V++AFY L P GI WP + +G PSFKLEHL+ N
Sbjct: 115 LFYRNLLDPYSREWQNGNSRWDLIDVVRAFYALRPDGIEWPQREDGAPSFKLEHLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DVRAT+ LARL++ NP+LF+++L +R K+ V ++ P A+P +I+
Sbjct: 175 IAHEGAHDAVADVRATIALARLLKARNPKLFDYLLGMRGKRAVAKQLDLPSAKPLLHISR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP L +IR+ + + E
Sbjct: 235 RYPASRGCSALVMPLAEHPTNPNGVIVYDLSVDPSDLLAMSAEQIRERVFVSQQDLSEGE 294
Query: 180 --IPISMIHLNRSPIV--ISNLKVLS-------SNLMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+NR P++ + LK + ++ R D++ + K ++
Sbjct: 295 VRIPLKVIHINRCPVIFPATALKDVDGPRKGEYGTIVERLTIDIDACRGHWK---TLREA 351
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ +K+ + D+ + D LY +F S D ++ +M P L F F++
Sbjct: 352 NGVAQKVAEVFNAAYEDVPQDPDLMLYSGSFFSAADRQQMERALAMDPWDLVGQRFAFQD 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA- 346
+LEE++F YRAR++ +TL +E ++W+ +R R + + + + F EIE ++
Sbjct: 412 PRLEEMLFRYRARSYPDTLEGEEREQWEAFRWMRINDPALSGFTLKAFAREIERYNQQIL 471
Query: 347 NEHDTKILNALLMYGKSI 364
++ + ++L L+MY +++
Sbjct: 472 SDRERQVLEELVMYVEAM 489
>gi|399912599|ref|ZP_10780913.1| exonuclease I [Halomonas sp. KM-1]
Length = 496
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 211/378 (55%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL++PY REW+N SRWDLI+ ++AF+ L P GI WP + +G PSF+LE L+ N
Sbjct: 115 LFYRNLLDPYSREWQNGNSRWDLIDAVRAFHALRPAGIAWPKREDGSPSFRLEDLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DVRAT+ LARL+R N RLF+++L+LR K+ V + P +P +++
Sbjct: 175 IAHEGAHDAVADVRATIALARLLRQRNERLFDYLLALRSKREVAKRLDVPGRKPVLHVSR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L +P+ + +IR + + E
Sbjct: 235 RYPASRGCSALVMPLAEHPTNPNGVIVYDLSVEPQALIEMSAEQIRQRVFVSSDDLAEGE 294
Query: 180 --IPISMIHLNRSPIVI--SNLKVLS-------SNLMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+NRSP+++ + LK + ++ R DL N K ++ +
Sbjct: 295 ARIPLKVIHINRSPVILPAAALKDVEGPRQGEYGEIVERLGLDLAACRANWK---RLMAS 351
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ K + D + D LY F S D ++ +R SP L + F F++
Sbjct: 352 PEVGGKAAEVFAQAPPDGPHDPDLMLYSGGFFSPADRQEMQRVRDASPWDLVDARFAFQD 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA- 346
+LEE++F YRAR++ +TLS +E RW+ YR R + + + F EIE + A
Sbjct: 412 PRLEEMLFRYRARSYPDTLSSEEQARWEAYRWDRLNDAAVAGFTLRDFAREIERFNQVAL 471
Query: 347 NEHDTKILNALLMYGKSI 364
++ D IL L+M+ +++
Sbjct: 472 SDRDRAILEELVMHVEAM 489
>gi|409199857|ref|ZP_11228060.1| exonuclease I [Pseudoalteromonas flavipulchra JG1]
Length = 489
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 213/369 (57%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++A Y L P GI WP + +G PSFKLEHL+ N +
Sbjct: 124 LYRNFYDPYEREWQNGNSRWDIIDLVRACYALRPEGIEWPTREDGNPSFKLEHLTVANGI 183
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+ F + R KK V + I +P +++ M
Sbjct: 184 EHGAAHDALSDVTATIALAKLIKTKQPKLYEFYFNHRHKKAVSSLIDVFNMQPLVHVSSM 243
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
F ++ + + P+ HP+N N +I ++L P+ D+ ++ L K++ +D +
Sbjct: 244 FPAQQGCTTWIAPMSFHPVNSNAVICFDLTQSPEVLNDLDVEALKQRLYTKRSELGDDEL 303
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++H+N+ P+V +L N R D +N+K + ++F D
Sbjct: 304 PVGLKLVHINKCPLVAPAKTLLPENAA-RLGIDREQCLENLKYLKARPELRDKVAEVFSD 362
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
K + N D +LY+ F SK D K AI+R+ SP++L+ + FE+ K L+F YR
Sbjct: 363 EK--GFEKPSNPDYQLYDGFTSKADKAKFAIIRNASPEELATIKLDFEDSKFNTLLFRYR 420
Query: 299 ARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
ARN+ +TLS EL +W+KY ++ +N+ N + F LE+E+L+ + NEH+ +IL
Sbjct: 421 ARNWPQTLSPVELDKWRKYCQNKLMHNEDNPSISAEDFMLELENLVAENEGNEHNMQILK 480
Query: 356 ALLMYGKSI 364
AL Y +S+
Sbjct: 481 ALYHYAQSL 489
>gi|359394147|ref|ZP_09187200.1| Exodeoxyribonuclease I [Halomonas boliviensis LC1]
gi|357971394|gb|EHJ93839.1| Exodeoxyribonuclease I [Halomonas boliviensis LC1]
Length = 497
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 213/378 (56%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL++PY REW+N SRWDLI++++AFY L P GI WP + +G PSFKLEHL+ N
Sbjct: 115 LFYRNLLDPYSREWQNGNSRWDLIDIVRAFYALRPDGIEWPLREDGAPSFKLEHLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DVRAT+ LARL++ N +LF+++L LR K+ V ++ P A+P +I+
Sbjct: 175 IAHEGAHDAVADVRATIALARLLKARNAKLFDYLLGLRGKRAVAKQLDLPNAKPLLHISR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP L +IR+ + + E
Sbjct: 235 RYPASRGCSALVMPLAEHPTNPNGVIVYDLSVDPSDMLGMSAEQIRERVFVSQQDLTEGE 294
Query: 180 --IPISMIHLNRSPIV--ISNLKVLS-------SNLMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+NR P+V S LK + ++ R D+ ++ K ++ +
Sbjct: 295 ARIPLKVIHINRCPVVFPASALKDVEGPQQGEYGTIVARLGLDVAACRQHWK---TLRDA 351
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ K+ + D + D LY +F S D ++ +R M P L F F++
Sbjct: 352 NGVAAKVAEVFSAGYDDAPQDPDLMLYSGSFFSAADRQQMERVREMEPWDLVGQRFAFQD 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA- 346
+LEE++F +RAR++ +TL +E ++W+ +R R + + + F EI ++
Sbjct: 412 PRLEEMLFRFRARSYPDTLEGEEREQWEAFRWMRINDPALAGFTLKAFAREIAQYNQQTL 471
Query: 347 NEHDTKILNALLMYGKSI 364
+ + +IL L+M+ +++
Sbjct: 472 TDRERQILEELVMFVEAM 489
>gi|392541778|ref|ZP_10288915.1| exonuclease I [Pseudoalteromonas piscicida JCM 20779]
Length = 489
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 213/369 (57%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++A Y L P GI WP + +G PSFKLEHL+ N +
Sbjct: 124 LYRNFYDPYEREWQNGNSRWDIIDLVRACYALRPEGIEWPTREDGNPSFKLEHLTVANGI 183
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+ F + R KK V + I +P +++ M
Sbjct: 184 EHGAAHDALSDVTATIALAKLIKTKQPKLYEFYFNHRHKKAVSSLIDVFNMQPLVHVSSM 243
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
F ++ + + P+ HP+N N +I ++L P+ D+ ++ L K++ ED +
Sbjct: 244 FPAQQGCTTWIAPMSFHPINSNAVICFDLTQSPEVLNDLDVEALKQRLYTKRSELGEDEL 303
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++H+N+ P+V + K LS R D +N+K + ++F D
Sbjct: 304 PVGLKLVHINKCPLV-APAKTLSPENAARLGIDREQCLENLKYLKARPELRDKVAEVFSD 362
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + N D +LY+ F SK D K AI+R+ SP++L+ + FE+ K L+F YR
Sbjct: 363 EQ--GFEKPSNPDYQLYDGFTSKADKAKFAIIRNASPEELATIELDFEDGKFNTLLFRYR 420
Query: 299 ARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
ARN+ ++LS EL +W+KY ++ +N+ N + F LE+E+L+ + NE + +IL
Sbjct: 421 ARNWPQSLSPVELDKWRKYCQNKLMHNEDNPSISAEDFMLELENLVAENEGNERNMQILK 480
Query: 356 ALLMYGKSI 364
AL Y +S+
Sbjct: 481 ALYHYAQSL 489
>gi|392548088|ref|ZP_10295225.1| exonuclease I [Pseudoalteromonas rubra ATCC 29570]
Length = 483
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 211/369 (57%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++A Y L P GI WP K++G PSF+LE L+ N +
Sbjct: 118 LYRNFYDPYEREWQNGNSRWDIIDLVRACYALRPEGIVWPKKDDGTPSFRLEDLTKANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+ F SLR KK + I +P + +
Sbjct: 178 EHADAHDALSDVTATIALAKLIKEKQPKLYQFFFSLRGKKALADLIDVFNMQPLVHTSSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
+ S + P+ HP+NKN ++ +NL +DP+ L + ++R L K + ED +
Sbjct: 238 IPATQGCTSWIAPMSFHPVNKNAVVCFNLTNDPQVLLDLSVEELRARLYTKHSDLGEDEL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D +N+K S ++F D
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLENLKVLKSNPELRNKVAEVFND 356
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + SD N D +LYN FISK D KLAI+RS P +L ++ FE+ K L+F YR
Sbjct: 357 -QGDFSDT-TNPDYQLYNGFISKADKAKLAIVRSAPPHELGSLALEFEDPKFHTLLFRYR 414
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLL--KKANEHDTKILN 355
ARN+ E+LS EL +W+KY ++ + ++N N F + +E+L+ + NE + +L
Sbjct: 415 ARNWPESLSENELDQWRKYCQNKLMHGEDNPSINAQDFMITLENLVYEHEGNEKNLAVLK 474
Query: 356 ALLMYGKSI 364
AL Y +S+
Sbjct: 475 ALYHYAQSL 483
>gi|307546461|ref|YP_003898940.1| exonuclease I [Halomonas elongata DSM 2581]
gi|307218485|emb|CBV43755.1| exonuclease I [Halomonas elongata DSM 2581]
Length = 506
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 209/375 (55%), Gaps = 11/375 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNLI+PY REW+N SRWDLI+V++AF+ L P GITWP +++G PSFKLE L+ N
Sbjct: 125 LFYRNLIDPYAREWQNGNSRWDLIDVVRAFHALRPDGITWPTRDDGTPSFKLEDLTAANG 184
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+ LARL+R +N LF+++L +R K+ V I +P +I+
Sbjct: 185 IEHAGAHDALADVRATIELARLLRRSNANLFDYLLGMRGKRAVGRAIDVASRKPVLHISR 244
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP+ L D +IRD + + E
Sbjct: 245 RYPASRGCSALVMPLAEHPTNPNGVIVYDLAVDPEPLLSLDAQQIRDRVFVSNDDLAEGE 304
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCAS------SILNNTYI 231
IP+ +IH+N+ P+++ + ++ R ++ + AS ++ + +
Sbjct: 305 SRIPLKVIHINKCPVIMPANALKDASGPHRGEYGEIVERLGVDVASCRRHWKALAASPDV 364
Query: 232 WKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
++ + + + D LY F S D ++ +R P L F F++ +L
Sbjct: 365 SARVAEVFAGPPPESPHDPDLMLYSGGFFSPSDRQQMQRVRDSDPWDLVGARFAFQDPRL 424
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA-NEH 349
EE++F YRAR++ +TL+ +E RW+ +R R + + + F EIE L + + +
Sbjct: 425 EEMLFRYRARSYPDTLTGEEQARWEAFRWERMNDPAVAGFTLTEFAREIERLNQVSLADR 484
Query: 350 DTKILNALLMYGKSI 364
+ +IL L+M+ ++I
Sbjct: 485 ERQILEELVMHVEAI 499
>gi|452750085|ref|ZP_21949840.1| exonuclease I [Pseudomonas stutzeri NF13]
gi|452006087|gb|EMD98364.1| exonuclease I [Pseudomonas stutzeri NF13]
Length = 478
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 212/374 (56%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++I+ Y L P G+ WP + G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLIRTAYALRPEGLIWP-EEEGRVTLKLERLSVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARLIR+ PRL++++ +LR+K+ VL +I + P +++
Sbjct: 169 EHLNAHDALSDVRATIALARLIRDRQPRLYDYLYNLRRKQAVLEQIR--LLEPMVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L P+ L +R L +++ +
Sbjct: 227 FSAARHFLSVVLPLGWHPRNRNALIVCDLQAGPEPLLQETAETLRQRLYTRRDQLADGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW----KK 234
+P+ ++H+N+ P V++ LKVL + + R D++ + A+ + IW +
Sbjct: 287 PVPLKLVHVNKCP-VVAPLKVLRAEDIQRLALDMSLCHER---AAMLREQRQIWSTKLED 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
I+ + + +D + +++LY+ F+ ++D +RS+SP +L+ F F++ +LEEL+
Sbjct: 343 IYREERFAGTD---DPEQQLYDGFLGERDRRLCDQVRSLSPAELAKQPFRFDDARLEELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS E +W+++ R + N + F L+IE + A ++
Sbjct: 400 FRYRARNFPEALSVDEQAQWRQFCQQRLSDGAYGAPNTLAQFELDIEQFMVGATPAQRQL 459
Query: 354 LNALLMYGKSITQK 367
L +G+ + ++
Sbjct: 460 LQQWREHGQGLRER 473
>gi|442611447|ref|ZP_21026153.1| Exodeoxyribonuclease I [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747375|emb|CCQ12215.1| Exodeoxyribonuclease I [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 479
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 212/370 (57%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDLI+V++A Y L P G+ WP K++G PSFKLE L+ N++
Sbjct: 114 LYRNFYDPYEREWQNGNSRWDLIDVVRACYALRPDGMQWPLKDDGSPSFKLEQLTVANDI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H +AHDALSDV AT+ LA+ ++ P+LF F L+ R KK + + I P + +
Sbjct: 174 AHGQAHDALSDVLATIELAKKLKACQPKLFEFFLNHRHKKALSSLIDVFNMTPLVHTSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
++ + + P+ HP NKN LIT++L DP L ++IR+ + K+ ED
Sbjct: 234 INASQGCTTWIAPMSFHPQNKNALITFDLTQDPSPLLTLSADEIRERMYTKRTELSEDET 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + ++H+N+ PI+ +L N R + D +++ S N + +K+
Sbjct: 294 PIGLKLVHINKCPILAPAKTLLPENAK-RLEIDREACLRHLAILKS---NPNLREKVSEV 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y N + + N D +LY F S D K +++R SP++L +++ F++ + L+F Y
Sbjct: 350 YADNRAFEASTNADYQLYQGFASNGDKAKFSVIRDCSPQQLGSLDLQFDDPRYTTLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLL--KKANEHDTKIL 354
RARN+ ETLS +EL++W+KY + N +N N + F L +E+L+ + NE+ IL
Sbjct: 410 RARNWPETLSPQELEKWRKYCQDKLLNDLDNPSINASDFMLTLENLVHEHEGNENKLSIL 469
Query: 355 NALLMYGKSI 364
AL Y +S+
Sbjct: 470 KALYHYAQSL 479
>gi|393762045|ref|ZP_10350674.1| exonuclease I [Alishewanella agri BL06]
gi|392607077|gb|EIW89959.1| exonuclease I [Alishewanella agri BL06]
Length = 477
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 13/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+ SRWDLI++++A Y L P GI WP + +G PSFKLEHL+ NNL
Sbjct: 112 LYRNFFDVYGREWQQGNSRWDLIDLVRACYALRPEGINWPLREDGSPSFKLEHLTKANNL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +A+LI+ P+LF ++ LRKK+ V I P +++
Sbjct: 172 EHSSAHDALSDVYATIAIAKLIKQQQPKLFQYLFELRKKQKVSELIDVAGLTPLVHVSSK 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS----FK 177
F + S + P+ HP NKN +I +NL DP L +D+ ++ L +KK S +
Sbjct: 232 FPAAQGCASWVVPLAYHPTNKNAVICYNLQLDPSPLLNDDLATLQQKL-YKKTSDLADGE 290
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ + + +IHLN+ P V++N K LS+ D N ++++ + + + +K+
Sbjct: 291 QRLGLKLIHLNKCP-VLANAKTLSAERATELGIDRNLCLQHLEW---LRQHRELQQKVVE 346
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y+ E N D +LY FIS D K+ +L + P L+ + F ++L L FL
Sbjct: 347 LYQTPTEYSAETNPDYQLYQGFISDADKQKMQLLHQLDPANLTADSVLFNEERLNRLYFL 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLLKK--ANEHDTKI 353
YRARN+ TL+ EL++W++YR + + +N + F L +E+L + A+E T I
Sbjct: 407 YRARNYPLTLTDSELQKWQRYRTDKLMHGLDNPNLTLEQFSLALENLAHEHSADEQKTAI 466
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 467 LKALYRYAEAL 477
>gi|217973824|ref|YP_002358575.1| exonuclease I [Shewanella baltica OS223]
gi|217498959|gb|ACK47152.1| Exodeoxyribonuclease I [Shewanella baltica OS223]
Length = 470
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 210/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D DI +I+ + + ED
Sbjct: 234 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 294 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKEFAREQYK---RLKLHPELREKLALL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S + D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 350 FEHDDSRATTDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ SR ++ + L++E+LL+ +A+E K+L
Sbjct: 410 RARNYPELLDYEESQRWREFCQSRLADQD--------YVLKLENLLQDTQADETKQKLLA 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|373949080|ref|ZP_09609041.1| Exodeoxyribonuclease I [Shewanella baltica OS183]
gi|386325081|ref|YP_006021198.1| Exodeoxyribonuclease I [Shewanella baltica BA175]
gi|333819226|gb|AEG11892.1| Exodeoxyribonuclease I [Shewanella baltica BA175]
gi|373885680|gb|EHQ14572.1| Exodeoxyribonuclease I [Shewanella baltica OS183]
Length = 472
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 211/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTHANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D DI +I+ + + ED
Sbjct: 236 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 296 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKEFAREQYK---RLKLHPELREKLALL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S ++ D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 352 FEHDDSRTTIDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ +R ++ + L++E+LL+ +A+E K+L
Sbjct: 412 RARNYPELLDYEESQRWREFCQNRLADQD--------YVLKLENLLQDTQADETKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|440740822|ref|ZP_20920295.1| exonuclease I [Pseudomonas fluorescens BRIP34879]
gi|447918108|ref|YP_007398676.1| exonuclease I [Pseudomonas poae RE*1-1-14]
gi|440375701|gb|ELQ12402.1| exonuclease I [Pseudomonas fluorescens BRIP34879]
gi|445201971|gb|AGE27180.1| exonuclease I [Pseudomonas poae RE*1-1-14]
Length = 475
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 210/372 (56%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GITWP + +G+ + KL+ L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGITWP-EQDGRVTLKLDRLTQANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R P+LF+++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVRKKQPKLFDWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLALDAETLRQRLYTRRDELAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL + R + D++ A + + +W+ K+
Sbjct: 286 PVPLKLVHINRCP-VVAPLSVLRAQDCERLQLDMDSYQAR---ALRLTDAQDVWRDKLMA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY FI +D +R+ P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAEDDFAANEDPEQQLYAGFIGDRDRRLCEQVRAAEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETLS++E +RWK + R + + N + F L L+ A ++L+
Sbjct: 402 RARNFAETLSHEEQQRWKLFCQQRLSDAQWGAPNTLESFNLARRELMISATSIQREVLDQ 461
Query: 357 LLMYGKSITQKI 368
Y ++ Q++
Sbjct: 462 WQEYVDALAQRM 473
>gi|375108578|ref|ZP_09754833.1| exonuclease I [Alishewanella jeotgali KCTC 22429]
gi|374571369|gb|EHR42497.1| exonuclease I [Alishewanella jeotgali KCTC 22429]
Length = 477
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 205/370 (55%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+ SRWDLI++++A Y L P GI WP +++G PSFKLE L+ NNL
Sbjct: 112 LYRNFYDVYGREWQQGNSRWDLIDLVRACYALRPEGINWPLRDDGSPSFKLEQLTKANNL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +A+LI+ P+LF+++ LRKK+ V I P +I+
Sbjct: 172 EHSAAHDALSDVYATIAIAKLIKQQQPKLFHYLFELRKKQKVAELIDVAGLTPLVHISSK 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +I +NL DP+ L +D+ ++ L K + E
Sbjct: 232 FPATQGCASWIVPLAYHPSNKNAVICYNLQLDPRALLDDDLATLQQKLYRKSSELAEGEQ 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ + +IHLN+ P V++N K LS+ D N +++ + N + +K+
Sbjct: 292 RLGLKLIHLNKCP-VLANAKTLSAERATELGIDRNQCLHHLEW---LRQNRQLQQKVVEL 347
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + E N D +LYN FIS D K+ L + P L+ + F ++L L FLY
Sbjct: 348 YQQAGDYGAETNPDYQLYNGFISDADKQKMQQLHQLDPASLTADSLIFSEERLNRLYFLY 407
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLLKK--ANEHDTKIL 354
RARN+ +L+ EL++W++YR + + +N + F L +E+L + A+E IL
Sbjct: 408 RARNYPLSLTDSELQKWQRYRTDKLMHGLDNPNLTLEQFSLALENLAHEHSADEQKMAIL 467
Query: 355 NALLMYGKSI 364
AL Y +++
Sbjct: 468 KALYRYAEAL 477
>gi|77360198|ref|YP_339773.1| exonuclease I [Pseudoalteromonas haloplanktis TAC125]
gi|76875109|emb|CAI86330.1| exodeoxyribonuclease I [Pseudoalteromonas haloplanktis TAC125]
Length = 481
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 209/373 (56%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI++ P+L+NF SLR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKDKQPKLYNFFFSLRGKKALAELVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
+ S + P+ HP+NKN +I ++L P+ + + ++R L K+ ED +
Sbjct: 236 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQSPQVLIDLSVEQLRKRLYTKRIDLAEDEL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D KN+ + N+ + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLKNLAVLKA---NSELRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P+ L+++ FENKK L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPEDLADLKLDFENKKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ +TL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 412 RARNWPQTLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|386019750|ref|YP_005937774.1| exonuclease I [Pseudomonas stutzeri DSM 4166]
gi|327479722|gb|AEA83032.1| exonuclease I [Pseudomonas stutzeri DSM 4166]
Length = 477
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 209/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP +++G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIGWP-EDDGRVTLKLERLSAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+GLARLIR PRL+ ++ +LR+K VL ++ + P +++
Sbjct: 169 EHLNAHDALSDVRATIGLARLIRERQPRLYEYLFNLRRKHAVLEQVT--LLEPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L + + L +R L +++ E
Sbjct: 227 FSAARHFLSVVLPLAWHPRNRNALIVCDLQAEARPLWLESAETLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK----K 234
+P+ ++H+N+ P V++ LKVL + R + DL + A ++ ++W +
Sbjct: 287 PVPLKLVHINKCP-VLAPLKVLREADIQRLELDLPACHER---ADALREQRHVWSPKLDE 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ + D + +++LY+ F+ ++D +R M+P +L+ F++ +LEEL+
Sbjct: 343 VYREEGFIGVD---DPEQQLYDGFLGERDRRLCDRIREMAPAELARQQCHFDDVRLEELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS +E RW+++ R + N + F +I+ + A ++
Sbjct: 400 FRYRARNFPEALSAEERVRWQRFCQQRLSGEIAGAPNTLAQFEADIQQFMLTATPAQQQL 459
Query: 354 LNALLMYGKSITQK 367
L YG+++ ++
Sbjct: 460 LQQWREYGRALGER 473
>gi|153000207|ref|YP_001365888.1| exonuclease I [Shewanella baltica OS185]
gi|151364825|gb|ABS07825.1| Exodeoxyribonuclease I [Shewanella baltica OS185]
Length = 472
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 210/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYVREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D DI +I+ + + ED
Sbjct: 236 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 296 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKAFAREQYK---RLKLHPELREKLALL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S + D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 352 FEHDDSRATTDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ SR ++ + L++E+LL+ +A+E K+L
Sbjct: 412 RARNYPELLDYEESQRWREFCQSRLADQD--------YVLKLENLLQDTQADETKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|339493141|ref|YP_004713434.1| exonuclease I [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800513|gb|AEJ04345.1| exonuclease I [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 477
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 209/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP +++G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIGWP-EDDGRVTLKLERLSAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+GLARLIR PRL+ ++ +LR+K VL ++ + P +++
Sbjct: 169 EHLNAHDALSDVRATIGLARLIRERQPRLYEYLFNLRRKHAVLEQVT--LLEPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L + + L +R L +++ E
Sbjct: 227 FSAARHFLSVVLPLAWHPRNRNALIVCDLQAEVRPLWLESAETLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK----K 234
+P+ ++H+N+ P V++ LKVL + R + DL + A ++ ++W +
Sbjct: 287 PVPLKLVHINKCP-VLAPLKVLREADIQRLELDLPACHER---ADALREQRHVWSPKLDE 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ + D + +++LY+ F+ ++D +R M+P +L+ F++ +LEEL+
Sbjct: 343 VYREEGFIGVD---DPEQQLYDGFLGERDRRLCDRIREMAPAELARQQCHFDDVRLEELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS +E RW+++ R + N + F +I+ + A ++
Sbjct: 400 FRYRARNFPEALSAEERVRWQRFCQQRLSGEIAGAPNTLAQFEADIQQFMLTATPAQQQL 459
Query: 354 LNALLMYGKSITQK 367
L YG+++ ++
Sbjct: 460 LQQWREYGRALGER 473
>gi|392422234|ref|YP_006458838.1| exonuclease I [Pseudomonas stutzeri CCUG 29243]
gi|390984422|gb|AFM34415.1| exonuclease I [Pseudomonas stutzeri CCUG 29243]
Length = 478
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 209/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P G+ WP + G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGLVWP-EEEGRVTLKLERLSVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R+ PRL++++ +LR+K+ VL +I + P +++
Sbjct: 169 EHLNAHDALSDVRATIALARLVRDRQPRLYDYLYNLRRKQAVLEQIR--LLEPMVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L P+ L +R L +++ +
Sbjct: 227 FSAARHFLSVVLPLGWHPRNRNALIVCDLQAGPEPLLQETAETLRQRLYTRRDQLADGGL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW----KK 234
+P+ ++H+N+ P V++ LKVL + + R D+ + A+ + IW +
Sbjct: 287 PVPLKLVHVNKCP-VVAPLKVLRTQDIQRLGLDMPICHER---AAMLRGQRQIWSTKLED 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
I+ + + +D + +++LY+ F+ +D +RS+SP +L+ F F++ +L+EL+
Sbjct: 343 IYREDRFAGTD---DPEQQLYDGFLGDRDRRLCDQVRSLSPAELAKQPFRFDDARLDELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS E +W+++ R + N + F +IE + A ++
Sbjct: 400 FRYRARNFPEALSVDEQAQWRQFCQQRLSDGACGAPNTLVQFESDIEQFMIGATPAQRQL 459
Query: 354 LNALLMYGKSITQK 367
L YG+ + ++
Sbjct: 460 LQQWREYGQGLRER 473
>gi|359453712|ref|ZP_09243020.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20495]
gi|358049286|dbj|GAA79269.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20495]
Length = 483
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 208/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 118 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALAELVDVFNMTPLVHTTSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + ++ ++R L K+ E D+
Sbjct: 238 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNVEELRKRLYTKRVDLAEGDL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTNLRDKVTEV 353
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK + L+F Y
Sbjct: 354 FNEKGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAEPDELAGLKLDFEDKKFDTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 414 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 470
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 471 TILKALYNYAQSM 483
>gi|126173926|ref|YP_001050075.1| exonuclease I [Shewanella baltica OS155]
gi|386340686|ref|YP_006037052.1| Exodeoxyribonuclease I [Shewanella baltica OS117]
gi|125997131|gb|ABN61206.1| Exodeoxyribonuclease I subunit C [Shewanella baltica OS155]
gi|334863087|gb|AEH13558.1| Exodeoxyribonuclease I [Shewanella baltica OS117]
Length = 472
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 209/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D DI +I+ + + ED
Sbjct: 236 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 296 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKEFAREQYK---RLKLHPELREKLALL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S + D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 352 FEHDDSRATTDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ SR ++ + L++E+LL+ + +E K+L
Sbjct: 412 RARNYPELLDYEESQRWREFCQSRLADQD--------YVLKLENLLQDTQVDETKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|359440957|ref|ZP_09230866.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20429]
gi|358037218|dbj|GAA67115.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20429]
Length = 481
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRGKKALAELVDVFNMTPLVHTTSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNVEELRKRLYTKRVDLAEDDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTDLRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLKLDFEDKKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 412 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|431928271|ref|YP_007241305.1| exonuclease I [Pseudomonas stutzeri RCH2]
gi|431826558|gb|AGA87675.1| exonuclease I [Pseudomonas stutzeri RCH2]
Length = 486
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 209/375 (55%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ + KLE LS N L
Sbjct: 118 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIVWP-EEDGRVTLKLERLSVANGL 176
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+GLARLIR+ PRL++++ +LR+K+ VL +I + P +++
Sbjct: 177 EHLNAHDALSDVRATIGLARLIRDRQPRLYDYLYNLRRKQAVLEQIT--LLEPLVHVSGR 234
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L +P+ L +R L +++ E
Sbjct: 235 FSAARHFLSVVLPLGWHPRNRNALIVCDLQAEPQPLLQERAETLRQRLYTRRDQLAEGEL 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ ++H+N+ P V++ LKVL + R D+ C + A+++ +W
Sbjct: 295 PVPLKLVHVNKCP-VLTPLKVLREADIQRLGLDMPLCQAR----AAALREQRQLWSHKLD 349
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+I+ + SD + +++LY+ F+ ++D +R ++P +L+ F++ +LEEL
Sbjct: 350 EIYREEGFAGSD---DPEQQLYDGFLGERDRRLCDEIRGLAPAELARHPSRFDDVRLEEL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
+F YRARNF E LS E +W+++ R + N + F IE + A +
Sbjct: 407 LFRYRARNFPEALSAAEQAQWRRFCQQRLSDDACGAPNTLAQFEAGIEQSMVTATPAQQQ 466
Query: 353 ILNALLMYGKSITQK 367
+L YG + ++
Sbjct: 467 LLQQWRDYGLGLRER 481
>gi|359435815|ref|ZP_09225965.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20652]
gi|357917530|dbj|GAA62214.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20652]
Length = 483
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 118 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRGKKALAELVDVFNMTPLVHTTSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + ++ ++R L K+ E D+
Sbjct: 238 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNVEELRKRLYTKRVDLAEGDL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTDLRDKVTEV 353
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK L+F Y
Sbjct: 354 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLKLDFEDKKFNTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 414 RARNWPETLNQQELDQWRQYCQNKLMHSEDQPSINAQDFMITLENL---AHEHDDSEKNL 470
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 471 TILKALYNYAQSM 483
>gi|383936309|ref|ZP_09989737.1| exodeoxyribonuclease I [Rheinheimera nanhaiensis E407-8]
gi|383702689|dbj|GAB59828.1| exodeoxyribonuclease I [Rheinheimera nanhaiensis E407-8]
Length = 477
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 208/370 (56%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY REW+N SRWDLI++++A Y L P GI WP + +G PSFKLE L+ N L
Sbjct: 112 LYRNFYEPYGREWQNGNSRWDLIDMVRACYALRPDGINWPRREDGSPSFKLEELTKANGL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDALSDV AT+ +A+LI+ P+LF+++ LRKK V I P +++
Sbjct: 172 AHENAHDALSDVYATIAIAKLIKQKQPKLFSYLFELRKKAKVAELIDVAGMTPLVHVSSK 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + +S + P+ HP NKN +I +NL DP L +D ++ L K +
Sbjct: 232 FPATQGCVSWVVPLAFHPTNKNAVICYNLQADPTPLLEDDSTTLQQKLYTKTADLADGEQ 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ + +IHLN+ P V++ K L+ ++ D K++ + K I L
Sbjct: 292 RLGLKLIHLNKCP-VLAPAKTLTEERAAQFGIDRAQCLKHLDFLRQ--HRATQAKAIELY 348
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
++N +E N D +LY+ FIS D K+A L ++P++L+ F +++L L+FLYR
Sbjct: 349 QQLNEFPVETNPDYQLYSGFISDGDKQKMAQLHQLTPEQLAVNAPVFSDERLNGLLFLYR 408
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESLLKK--ANEHDTKIL 354
ARN+ L+ E ++W++YR + + +N N+ M F L +E+L + ++E KIL
Sbjct: 409 ARNYPYCLTDSEQQKWQRYRTDKLMHGLDNP-NLTMEDFSLALENLAHEHASDEQKMKIL 467
Query: 355 NALLMYGKSI 364
+L +Y +S+
Sbjct: 468 KSLYLYVQSL 477
>gi|418026136|ref|ZP_12665109.1| Exodeoxyribonuclease I [Shewanella baltica OS625]
gi|353534569|gb|EHC04138.1| Exodeoxyribonuclease I [Shewanella baltica OS625]
Length = 472
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 210/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D DI +I+ + + ED
Sbjct: 236 ISARNGCTTLISPVAHHPNNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 296 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKEFAREQYK---RLKLHPELREKLALL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S + D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 352 FEHDDSRATTDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ +R ++ + L++E+LL+ +A+E K+L
Sbjct: 412 RARNYPELLDYEESQRWREFCQNRLADQD--------YVLKLENLLQDTQADETKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|332535945|ref|ZP_08411647.1| exodeoxyribonuclease I [Pseudoalteromonas haloplanktis ANT/505]
gi|332034679|gb|EGI71232.1| exodeoxyribonuclease I [Pseudoalteromonas haloplanktis ANT/505]
Length = 481
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALAELVDVFNMTPLVHTTSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNVEELRKRLYTKRVDLAEDDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTDLRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLKLDFEDKKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 412 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|392533607|ref|ZP_10280744.1| exonuclease I [Pseudoalteromonas arctica A 37-1-2]
Length = 483
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 118 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALAELVDVFNMTPLVHTTSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + ++ ++R L K+ E D+
Sbjct: 238 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNVEELRKRLYTKRVDLAEDDL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTDLRDKVTEV 353
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK L+F Y
Sbjct: 354 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLKLDFEDKKFNTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 414 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 470
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 471 TILKALYNYAQSM 483
>gi|410090338|ref|ZP_11286934.1| exonuclease I [Pseudomonas viridiflava UASWS0038]
gi|409762386|gb|EKN47407.1| exonuclease I [Pseudomonas viridiflava UASWS0038]
Length = 476
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 197/350 (56%), Gaps = 23/350 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P GI WP + G+ + KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EEEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V +I + +P +I+
Sbjct: 169 EHGQAHDALSDVRATIALARLIREKQPRLYDYLFALRSKQKVQDQIR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI ++L DP L D+ ++ L + ++ E
Sbjct: 227 FSAARHYLGVVLPLAWHPHNRNALIVYDLHQDPSPLLEMDVETLKQRLYTRHDALGEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL- 237
+P+ ++H+NR P V++ + VL + R + D+ + +S+ +W++
Sbjct: 287 PVPLKLLHINRCP-VVAPMSVLRAQDQERLQLDMTGYEARV---ASVTEGLEVWQEKLRA 342
Query: 238 ----DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
D+ I + D E ++LY+ FI +D +R P++L+ + F++ +L EL
Sbjct: 343 LYGKDHFIASEDPE----QQLYDGFIGDRDRRLCEQVRVSEPEQLARDAWPFDDARLPEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEI 339
+F YRARNF ETL+ +E RW ++ +R Y N L + +E+
Sbjct: 399 LFRYRARNFPETLTAEEQLRWHQFCQARLSHAEYGAPNTLQDFTKALVEL 448
>gi|388466407|ref|ZP_10140617.1| exodeoxyribonuclease I [Pseudomonas synxantha BG33R]
gi|388009987|gb|EIK71174.1| exodeoxyribonuclease I [Pseudomonas synxantha BG33R]
Length = 475
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 209/372 (56%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVMRTAYALRPEGIIWP-EQDGRVTLKLERLTHANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R PRL+ ++ LR K+ V+ E+ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVRQKQPRLYEWLFQLRSKQRVMDEVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R+ L +++ +
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLELDAQTLRERLYTRRDELADGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ LKVL + R + D++ A + + +W+ K+
Sbjct: 286 PVPLKLLHINRCP-VVAPLKVLRAQDRERLQLDMSTYQAR---ALRLTDAQEVWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P +L++ ++ F++ +L EL+F Y
Sbjct: 342 IYAEEDFASNADPEQQLYDGFIGDRDRRLCEQVRMAEPAQLAHQSWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEI-ESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW+ + R + + N M + + E L A ++L+
Sbjct: 402 RARNFPETLNTEEQQRWRLFCQQRLSDPQWGAPNTLMAFKQAREELALSATSFQCQVLDQ 461
Query: 357 LLMYGKSITQKI 368
Y S+ ++
Sbjct: 462 WQEYADSLAARL 473
>gi|398973779|ref|ZP_10684621.1| exonuclease I [Pseudomonas sp. GM25]
gi|398142731|gb|EJM31624.1| exonuclease I [Pseudomonas sp. GM25]
Length = 476
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 210/372 (56%), Gaps = 11/372 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + GK + KLE L+ NN+
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGKVTLKLERLTAANNI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL + R D+ A + A + + +WK K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRAEDQQRLGLDM--ALYQAR-ALRLSDAQQVWKDKVSA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ ++ F++++L EL+F Y
Sbjct: 343 IYASEDFTSSEDPEQQLYDGFIGDRDRRLCEQVRTTDPAQLAREHWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TL+++E +RWK + R + N + F +E L A ++L
Sbjct: 403 RARNFPDTLNFEEQERWKTFCRQRLSAPEWGAPNTLQSFAEAMEQWLLSAAPMQAEVLVE 462
Query: 357 LLMYGKSITQKI 368
Y +++ +++
Sbjct: 463 WQNYVQALRKRL 474
>gi|119469387|ref|ZP_01612326.1| exonuclease I [Alteromonadales bacterium TW-7]
gi|119447251|gb|EAW28520.1| exonuclease I [Alteromonadales bacterium TW-7]
Length = 481
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALGDLVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L P+ L ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQSPQVLLDLNVEELRKRLYTKRVDLAEGDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTDLRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ +N FE+KK L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLNLDFEDKKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ + F + +E+L A+EHD
Sbjct: 412 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|289628502|ref|ZP_06461456.1| exonuclease I [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289648244|ref|ZP_06479587.1| exonuclease I [Pseudomonas syringae pv. aesculi str. 2250]
gi|416014823|ref|ZP_11562540.1| exonuclease I [Pseudomonas syringae pv. glycinea str. B076]
gi|416028954|ref|ZP_11571843.1| exonuclease I [Pseudomonas syringae pv. glycinea str. race 4]
gi|422405708|ref|ZP_16482748.1| exonuclease I [Pseudomonas syringae pv. glycinea str. race 4]
gi|422583944|ref|ZP_16659061.1| exonuclease I [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422597490|ref|ZP_16671762.1| exonuclease I [Pseudomonas syringae pv. lachrymans str. M301315]
gi|320325491|gb|EFW81553.1| exonuclease I [Pseudomonas syringae pv. glycinea str. B076]
gi|320327221|gb|EFW83235.1| exonuclease I [Pseudomonas syringae pv. glycinea str. race 4]
gi|330868768|gb|EGH03477.1| exonuclease I [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330880763|gb|EGH14912.1| exonuclease I [Pseudomonas syringae pv. glycinea str. race 4]
gi|330987779|gb|EGH85882.1| exonuclease I [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 476
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 211/372 (56%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L DP L +D ++ L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDPSPLLQDDAEILKQRLYTRHEALGEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSESREVWQDKLSV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 LYGKEDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TLS +E +RW+ + R + + N + F + A ++L
Sbjct: 403 RARNFPDTLSSEEQQRWQDFCQQRLSDPERGAPNTLKDFATALAECSLSAAPEQLEVLRQ 462
Query: 357 LLMYGKSITQKI 368
Y +++++++
Sbjct: 463 WQDYAQALSKRL 474
>gi|71737440|ref|YP_276156.1| exonuclease I [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557993|gb|AAZ37204.1| exodeoxyribonuclease I [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 476
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 211/372 (56%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L DP L +D ++ L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDPSPLLQDDAEILKQRLYTRHEALGEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSESREVWQDKLSV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 LYGKEDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TLS +E +RW+ + R + + N + F + A ++L
Sbjct: 403 RARNFPDTLSSEEQQRWQDFCQQRLSDPERGAPNTLKDFATALAECSLSAAPEQLEVLRQ 462
Query: 357 LLMYGKSITQKI 368
Y +++++++
Sbjct: 463 WQDYAQALSKRL 474
>gi|398885368|ref|ZP_10640282.1| exonuclease I [Pseudomonas sp. GM60]
gi|398192610|gb|EJM79755.1| exonuclease I [Pseudomonas sp. GM60]
Length = 476
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 203/360 (56%), Gaps = 13/360 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNC-AFKNIKCASSILNNTYIWK-KIF 236
+P+ +IH+N+ P V++ L VL + R D+ + ++ +++ IW+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRPDDQQRLGLDMALYQERTLRLSAA----QTIWRDKVQ 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R+ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFAQSQDPEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILN 355
YRARNF ETLS++E +RW+ + R + N ++E + L A ++LN
Sbjct: 402 YRARNFPETLSFEEQERWRVFCQQRLSAPECGAPNTLEAFVEAAAQLNITATPFQQEVLN 461
>gi|398879265|ref|ZP_10634363.1| exonuclease I [Pseudomonas sp. GM67]
gi|398196849|gb|EJM83840.1| exonuclease I [Pseudomonas sp. GM67]
Length = 476
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 203/360 (56%), Gaps = 13/360 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNC-AFKNIKCASSILNNTYIWK-KIF 236
+P+ +IH+N+ P V++ L VL + R D+ + ++ +++ IW+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRPDDQQRLGLDMALYQERTLRLSAA----QTIWRDKVQ 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R+ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFAQSQDPEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILN 355
YRARNF ETLS++E +RW+ + R + N ++E + L A ++LN
Sbjct: 402 YRARNFPETLSFEEQERWRVFCQQRLSAPECGAPNTLEAFVEAAAQLNITATPFQQEVLN 461
>gi|161501966|ref|YP_261869.2| exonuclease I [Pseudomonas protegens Pf-5]
gi|341580333|gb|AAY94018.2| exodeoxyribonuclease I [Pseudomonas protegens Pf-5]
Length = 475
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 206/372 (55%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + G+ S KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPQGIVWP-EEQGQVSLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R+ PRL++++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVRDKQPRLYDWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ YI ++ P+ HP N+N LI +L DP+ L D +R L ++ E
Sbjct: 226 FSAARHYIGVVLPLAWHPRNRNALIVCDLHLDPQGLLELDAETLRQRLYTRREDLLEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL S R D+ + A ++ +W+ K+ +
Sbjct: 286 PVPLKLIHINRCP-VVAPLSVLRSEDQQRLHLDMELYQRR---AVALSEAQEVWRDKLSV 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P L+ + F++++L EL+F Y
Sbjct: 342 IYGPDEFAASDDPEQQLYDGFIGDRDRRLCEQVREADPLHLAQQQWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ E +RW + R + + N + F +E L A+ ++L+
Sbjct: 402 RARNFPETLNKAEQERWLVFCQQRLLDPQLGAPNTLESFRQGLEQSLLSADPMQRQVLDQ 461
Query: 357 LLMYGKSITQKI 368
Y +++T+++
Sbjct: 462 WQDYVQALTRRL 473
>gi|397170469|ref|ZP_10493882.1| exonuclease I [Alishewanella aestuarii B11]
gi|396087712|gb|EJI85309.1| exonuclease I [Alishewanella aestuarii B11]
Length = 477
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 204/370 (55%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+ SRWDLI++++ Y L P GI WP +++G PSFKLE L+ NNL
Sbjct: 112 LYRNFYDVYGREWQQGNSRWDLIDLVRTCYALRPEGINWPLRDDGSPSFKLELLTKANNL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +A+LI+ P+LF+++ LRKK+ V I P +I+
Sbjct: 172 EHSAAHDALSDVYATIAIAKLIKQQQPKLFHYLFELRKKQKVAELIDVAGLTPLVHISSK 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +I +NL DP+ L +D+ ++ L K + E
Sbjct: 232 FPAIQGCASWIVPLAYHPSNKNAVICYNLQLDPRALLDDDLATLQQKLYRKSSELAEGEQ 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ + +IHLN+ P V++N K LS+ D N +++ + N + +K+
Sbjct: 292 RLGLKLIHLNKCP-VLANAKTLSAERATELGIDRNQCLHHLEW---LRQNRQLQQKVVEL 347
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + E N D +LYN FIS D K+ L + P L+ + F ++L L FLY
Sbjct: 348 YQQAGDYGAETNPDYQLYNGFISDADKQKMQQLHQLDPASLTADSLIFSEERLNRLYFLY 407
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLLKK--ANEHDTKIL 354
RARN+ +L+ EL++W++YR + + +N + F L +E+L + A+E IL
Sbjct: 408 RARNYPLSLTDSELQKWQRYRTDKLMHGLDNPNLTLEQFSLALENLAHEHSADEQKMAIL 467
Query: 355 NALLMYGKSI 364
AL Y +++
Sbjct: 468 KALYRYAEAL 477
>gi|254449147|ref|ZP_05062598.1| exodeoxyribonuclease I [gamma proteobacterium HTCC5015]
gi|198261261|gb|EDY85555.1| exodeoxyribonuclease I [gamma proteobacterium HTCC5015]
Length = 474
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 202/369 (54%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N CSRWDLI+V++ L P GI WP+ +G PS KLE L+ N L
Sbjct: 110 FYRNFIDPYAREWQNGCSRWDLIDVVRLTRALRPEGIEWPFHEDGTPSNKLEDLTQANGL 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H KAHDA SD+ AT+ +A+ I+ P+L+ F L R K+ + ++ P +I+ M
Sbjct: 170 VHSKAHDAYSDIEATIAVAKRIKEKQPKLWQFCLHNRDKRKLAGQLKVAAKEPVVHISGM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KED 179
+ ++ + +++ P+ HP NKN +I ++L HDP + + D I + + ++ KE
Sbjct: 230 YGNERASTAIVVPVARHPSNKNGIIVYDLAHDPAELIALDSAAIAERVFTRREDLGDKER 289
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +HLN+ P VI+ L LS R D+ I+ I + + +++ +
Sbjct: 290 LPLKTVHLNKCP-VIAPLSTLSEEAAQRLGIDIEEQVARIETLKPIDD---LEQRVQAAF 345
Query: 240 KINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
D + D+ LY FI D + + S SP++LSN++ F++K+L EL+F +R
Sbjct: 346 GQQQFDPITDPDQSLYGGGFIGDSDKALMRQIHSASPEQLSNLDLPFQDKRLPELLFRFR 405
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILNA 356
ARN+ +L E +RW + ++ K+ N++ F ++ +L ++ D+K +L
Sbjct: 406 ARNYPMSLDSDEQQRWAELCREHIHDGKSGYLNLDQFQNKLMALAQEYEHDDSKLHVLKQ 465
Query: 357 LLMYGKSIT 365
L Y + I
Sbjct: 466 LADYVEHIA 474
>gi|119476956|ref|ZP_01617237.1| Exonuclease I [marine gamma proteobacterium HTCC2143]
gi|119449763|gb|EAW31000.1| Exonuclease I [marine gamma proteobacterium HTCC2143]
Length = 478
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 210/370 (56%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I++++ L P GI WP +NG PSFKLE L+ N +
Sbjct: 111 LYRNFYDPYAREWQNGNSRWDIIDMVRVCCALRPEGINWPTHDNGMPSFKLEQLTAANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ +A+LI+ P+LF+++L LR K V A + P + + M
Sbjct: 171 SHESAHDALSDVHATIAMAKLIKQKQPKLFDYLLKLRSKHEVSAMLNVAEKLPVLHTSAM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + +L+ P+ +HP NKN +I ++L DP L + +I + L + E
Sbjct: 231 YPAHRFCTTLIMPVAVHPTNKNGVICYDLSVDPAPLLSLNAGQITERLYTPASELPEGAA 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IH+NR P+V+++ K++ + R + DL A K+ + +++ + +K+
Sbjct: 291 RIPLKTIHINRCPVVVTS-KLMDEAVAERIQLDLPKARKHYQ---ALVKTQGLAEKLSEV 346
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + D LY F S+ D +A +R SP +L +F FE+ +L++++F Y
Sbjct: 347 FAERSFPERTDPDVMLYSGGFFSQNDKAVMAQVRCSSPDELREHSFVFEDARLDDMLFRY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLL--KKANEHDTKIL 354
RARNF E+LS +EL++W ++R R + + ++ ++ F ++LL + ++ D IL
Sbjct: 407 RARNFPESLSAEELQQWHEFRYYRLTDPEADVSISMEEFLETTQALLNDEACSDRDRAIL 466
Query: 355 NALLMYGKSI 364
L Y S+
Sbjct: 467 EELQDYSDSL 476
>gi|251789913|ref|YP_003004634.1| exonuclease I [Dickeya zeae Ech1591]
gi|247538534|gb|ACT07155.1| Exodeoxyribonuclease I [Dickeya zeae Ech1591]
Length = 476
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 202/370 (54%), Gaps = 15/370 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY W+N SRWDL+++++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFIDPYAYSWQNGNSRWDLLDMLRACYALRPDGIVWPENDDGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +ARL++ P+LF+++ LR K V A I P +P +++
Sbjct: 174 VEHTQAHDAMSDVYATIAMARLLKQAQPKLFDYLYGLRNKNKVSALIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D + L D +++R L +++ ED
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNAVIVCDLAGDIQPLLSLDADELRTRLYTRRDLLAEDE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P V++ L R D N++ + N+ + +K+
Sbjct: 294 SPVPIKLVHINKCP-VLAPASTLRPEDAERLGIDRQHCLNNLQL---LRQNSSVREKVVA 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + ++D +LY+ F S D +AI+R + L +N F ++++EEL+F
Sbjct: 350 LFADAPPFEAAKDVDLQLYDGFFSDADRAAMAIIRKTDAQHLPALNLQFADRRVEELLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
YRARNF TL +E +RW +R + F ++ Y +N Y L +E +L
Sbjct: 410 YRARNFPGTLDEQEQQRWLAHRRAMFTTERVQDYFDTLNQLY-----QLHDGDEKKAALL 464
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 465 KALFAYAQQL 474
>gi|325983472|ref|YP_004295874.1| exodeoxyribonuclease I [Nitrosomonas sp. AL212]
gi|325532991|gb|ADZ27712.1| Exodeoxyribonuclease I [Nitrosomonas sp. AL212]
Length = 478
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 204/370 (55%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWD+I++++ Y L P GITWP +G+PSFKLE L N +
Sbjct: 110 LYRNFYDPYAREWQQGNSRWDIIDLVRMTYALRPAGITWPQHEDGQPSFKLEDLVAANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDVR T+ LARL+R PRLF+++L LR K+ A++ P + T M
Sbjct: 170 WHESAHDALSDVRVTIALARLLRMQQPRLFDWLLQLRDKRKAAAQLDLITHNPVLHTTRM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +K SL+ P+ + P N N ++ ++L HDP+ FL + + + L + + E
Sbjct: 230 YPAKTGCTSLIMPLIVEPGNNNSILVYDLRHDPEMFLPLNADDLAPLLFTRNDDLPEGMQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ I +N+ P ++ L + R DL+ +++ + ++ + ++++
Sbjct: 290 RLPVKSIKINKCP-ALAPRNTLDNETAERIALDLDVCYRHWQTLCAMPD---FFQRVATA 345
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D L +R+ SP++L + F F +K+L EL+F YR
Sbjct: 346 YTSRTFESSSDVDVALYDGFLDNADAALLEQIRAASPQQLGEMQFNFHDKRLSELLFRYR 405
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDT---KIL 354
ARN+ ETL E +RW+ R+ R + F +I +LL++A + D +IL
Sbjct: 406 ARNWPETLKPAEAERWELLRLQRLTQADGGGSITFDEFSTQI-ALLREARKTDGQAEQIL 464
Query: 355 NALLMYGKSI 364
+A+ +G +
Sbjct: 465 DAVEDWGNDL 474
>gi|119775108|ref|YP_927848.1| exonuclease I [Shewanella amazonensis SB2B]
gi|119767608|gb|ABM00179.1| Exodeoxyribonuclease I subunit C [Shewanella amazonensis SB2B]
Length = 470
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 203/369 (55%), Gaps = 18/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+ SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQQGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTAANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H KAHDA+SDV AT+ LARLI+ P+LF++ LR+K+ V +I +P +I+
Sbjct: 174 GHDKAHDAMSDVYATIALARLIKEKQPKLFDYYFRLRRKQAVAEQIDVLAMQPLVHISSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +L+ P+ H NKN +I NL D + + D++ +R L K+ D
Sbjct: 234 IPATQGCATLIAPVAHHMRNKNAVICVNLAMDIQPLIDLDVDALRTRLYTKREDLANDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ IHLN+ P V +N K L R D A + + + + I +K+
Sbjct: 294 PVPVKQIHLNKCPFV-ANAKTLDDANAERLGIDKAFAREQYRL---LKQHPEIREKLTAL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + + D LY F S D K+ I+R+ SP+ L+ + F++ +L E++F Y
Sbjct: 350 FEEEPQGMSNDPDYSLYSGGFFSPADRAKMDIIRNTSPEHLAALELQFDDTRLPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
RARN+ TLSY E RW+++ +R N + + +E+LL++ +E K+L
Sbjct: 410 RARNYPLTLSYDESLRWREFCQARL--------NDPDYVIRLENLLEETTKDEKKQKLLG 461
Query: 356 ALLMYGKSI 364
AL Y +S+
Sbjct: 462 ALCQYLQSL 470
>gi|392554518|ref|ZP_10301655.1| exonuclease I [Pseudoalteromonas undina NCIMB 2128]
Length = 483
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 208/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 118 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+ F SLR KK + + P + +
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKEKQPKLYQFFFSLRGKKALAEMVDVFNMTPLVHTSSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
++ + + P+ HP+NKN +I ++L +P+ L ++ ++R L K+ E D+
Sbjct: 238 ITATQGCTTWVAPMSFHPVNKNAVICFDLTQNPQVLLDLNVEELRKRLYTKRIDLAEGDL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLTNLAILKA---NTELRDKVTEV 353
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P+ L+++ FE+ K L+F Y
Sbjct: 354 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPEDLASLKLEFEDPKFNTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ +TL+ +EL +W++Y S+ + ++ + F + +E+L A+EHD
Sbjct: 414 RARNWPQTLNQQELDQWRQYCQSKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 470
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 471 TILKALYNYAQSM 483
>gi|398983978|ref|ZP_10690329.1| exonuclease I [Pseudomonas sp. GM24]
gi|399013232|ref|ZP_10715543.1| exonuclease I [Pseudomonas sp. GM16]
gi|398114356|gb|EJM04183.1| exonuclease I [Pseudomonas sp. GM16]
gi|398156319|gb|EJM44740.1| exonuclease I [Pseudomonas sp. GM24]
Length = 476
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 189/318 (59%), Gaps = 10/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ NN+
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANNI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L DP+ L D +R+ L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPKNRNALIVCDLHLDPQGLLDLDAQTLRERLYTRRDDLLEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL + R D+ + A + + +WK K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLAVLRAQDQQRLGLDMALYQQR---ALRLTDAQQVWKDKVAE 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +RS P +L+ + F++++L EL+F Y
Sbjct: 343 IYVSEDFIPSEDPEQQLYDGFIGDRDRRLCEQVRSADPSQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWK 315
RARNF ETL+++E +RW+
Sbjct: 403 RARNFPETLNFEEQERWR 420
>gi|77460659|ref|YP_350166.1| exonuclease I [Pseudomonas fluorescens Pf0-1]
gi|77384662|gb|ABA76175.1| exodeoxyribonuclease I [Pseudomonas fluorescens Pf0-1]
Length = 476
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 210/372 (56%), Gaps = 11/372 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + GK + KLE L+ NN+
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGKVTLKLERLTAANNI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL ++ R D+ A + A + + +WK K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRADDQQRLGLDM--ALYQAR-ALRLSDAQQVWKDKVSA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ + F++++L EL+F Y
Sbjct: 343 IYASEDFTSNEDPEQQLYDGFIGDRDRRLCEQVRATDPGQLAREQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TL+++E +RW+ + R + N + F +E L A ++L
Sbjct: 403 RARNFPDTLNFEEQERWRIFCRQRLSAPEWGAPNTLQSFAEAMEQWLLSAAPMQAEVLVE 462
Query: 357 LLMYGKSITQKI 368
Y +++ +++
Sbjct: 463 WQNYVQALRKRL 474
>gi|359448549|ref|ZP_09238080.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20480]
gi|358045640|dbj|GAA74329.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20480]
Length = 481
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALGELVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L P+ L ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQSPQVLLDLNVEELRKRLYTKRIDLAEGDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTELRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ +N FE+KK L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADRAKFAIIRDAKPDELAGLNLDFEDKKFNILLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ EL++W++Y ++ + ++ + F + +E+L A+EHD
Sbjct: 412 RARNWPETLNQHELEQWRQYCQNKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|104780361|ref|YP_606859.1| exonuclease I [Pseudomonas entomophila L48]
gi|95109348|emb|CAK14048.1| exonuclease I [Pseudomonas entomophila L48]
Length = 476
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 200/363 (55%), Gaps = 18/363 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+GLARLIR+ P+L++++ LR K V+ ++ + +P +++
Sbjct: 169 DHGHAHEALSDVRATIGLARLIRDRQPKLYDWLFQLRSKHKVMEQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ +YI ++ P+ HP N+N LI +L D L +R L ++ E
Sbjct: 227 FSAERNYIGVVLPLAWHPRNRNALIVCDLGQDSAPLLKESAQVLRQRLYTRREDMAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---- 234
+P+ ++H+NR P V++ L V+ + R D++ + A + N W+
Sbjct: 287 PVPLKLVHINRCP-VVAPLSVIRAQDQQRLGIDMSTLQSH---ADHLANQQATWRDKLDI 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
IF + ++ + +++LY+ FI +D +R + P +L ++ F++ +L EL+
Sbjct: 343 IFEEEAFAPTE---DPEQQLYDGFIGDRDRRLCEQVRGVDPAQLGQGHWMFDDPRLPELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF +TL +EL RW + R + K N + F + +S L A+E ++
Sbjct: 400 FRYRARNFADTLDEQELARWHGFCRERLSDPKWGAPNTLGDFEVACQSSLANADEAGRRV 459
Query: 354 LNA 356
L A
Sbjct: 460 LEA 462
>gi|422680580|ref|ZP_16738851.1| exonuclease I [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331009925|gb|EGH89981.1| exonuclease I [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 434
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 193/331 (58%), Gaps = 11/331 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L DP L +D ++ L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDPSPLLQDDAEILKQRLYTRHEALGEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDMEGYQAR---ATQLSESREVWQDKLSV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 LYGKEDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNN 328
RARNF +TLS +E +RW+ + R + +
Sbjct: 403 RARNFPDTLSSEEQQRWQDFCQQRLSDPERG 433
>gi|359436348|ref|ZP_09226459.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20311]
gi|359444050|ref|ZP_09233854.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20439]
gi|358028989|dbj|GAA62708.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20311]
gi|358041999|dbj|GAA70103.1| exodeoxyribonuclease I [Pseudoalteromonas sp. BSi20439]
Length = 481
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+ F SLR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYQFFFSLRGKKALAEMVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L +P+ L ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQNPQVLLDLNVEQLRKRLYTKRIDLAEGDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTELRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P+ L+++ FE+ K L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPEDLASLKLEFEDPKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ +TL+ +EL +W++Y S+ + ++ + F + +E+L A+EHD
Sbjct: 412 RARNWPQTLNQQELDQWRQYCQSKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|339484596|ref|YP_004696382.1| Exonuclease domain-containing protein [Nitrosomonas sp. Is79A3]
gi|338806741|gb|AEJ02983.1| Exonuclease domain protein [Nitrosomonas sp. Is79A3]
Length = 477
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 199/363 (54%), Gaps = 12/363 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWD+I++++ Y L P GI WP G+ SF+LE L N +
Sbjct: 110 LYRNFYDPYAREWQQGNSRWDIIDLVRMTYALRPVGIVWPQHEEGQSSFRLEDLVAANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDVRAT+ LARL+R PRL++++ LR K+ A++ P + T M
Sbjct: 170 LHESAHDALSDVRATIALARLLRTQQPRLYDWLFQLRDKRTAAAQLDLATHNPVLHTTRM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +K SL+ P+ P N N ++ ++L DP+ FL D +++ L + + E
Sbjct: 230 YPAKTGCTSLVMPMITEPGNNNSVLVYDLRQDPELFLPLDADELSQLLFTRSDELPEGMQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ I +N+ P ++ L + R DL+ ++ + ++ ++++
Sbjct: 290 RLPVKSIKINKCP-ALAPRNTLDNEAAERIALDLDACHRHWQ---ALCAQPDFFQRVATA 345
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D LA +R SPK+L+ + F F +++L EL+F YR
Sbjct: 346 YTSRAFEPSGDVDVALYDGFLDNADAASLAQIRRASPKQLAKMRFDFHDQRLPELLFRYR 405
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL----KKANEHDTKIL 354
ARN+ ETL+ E +RW++ R+ R + N +I + +L +KA+E+ +IL
Sbjct: 406 ARNWPETLTTIESERWEQMRLQRL-TQGNGGGSITFAEFAAQIVLLREVQKADENAQQIL 464
Query: 355 NAL 357
NAL
Sbjct: 465 NAL 467
>gi|392538995|ref|ZP_10286132.1| exonuclease I [Pseudoalteromonas marina mano4]
Length = 481
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 206/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALGDLVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L P+ L ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQSPQVLLDLNVEELRKRLYTKRVDLAEGDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTELRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ K + N+D LY+ F S D K AI+R +L+ +N FE+KK L+F Y
Sbjct: 352 FNKQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKADELAGLNLDFEDKKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ + F + +E+L A+EHD
Sbjct: 412 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|330504554|ref|YP_004381423.1| exonuclease I [Pseudomonas mendocina NK-01]
gi|328918840|gb|AEB59671.1| exonuclease I [Pseudomonas mendocina NK-01]
Length = 481
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 12/351 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWP-EEDGRVSLKLERLTQANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+GLARL+R PRL++F+ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIGLARLLRERQPRLYDFLYQLRSKQRVMDQIR--LLQPMLHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y++ + P+ HP N+N LI +L DP L D +R L ++ E
Sbjct: 227 FSAARHYLAPVLPLAWHPRNRNALIVCDLQADPTPLLDLDAEVLRSRLYTRREDLAEGEV 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+NR P V++ L VL R + D + +N++ + + +W+ D
Sbjct: 287 PVPLKLLHINRCP-VVAPLSVLRDTDRQRLQLDWSHCERNVEM---LRDAQPLWQDKLTD 342
Query: 239 -YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + + +++LY+ FI +D +RS P+ L+N + F++ +L EL+F Y
Sbjct: 343 IYREESFAASSDPEQQLYDGFIGDRDRRLCEQVRSAQPQSLANDKWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKAN 347
RARNF ++LS E +RW + R + + N + F+ +E L N
Sbjct: 403 RARNFPDSLSPDEGQRWVDFCRQRLSDPQFGAPNTLAQFHAALEQLRADCN 453
>gi|160874834|ref|YP_001554150.1| exonuclease I [Shewanella baltica OS195]
gi|378708084|ref|YP_005272978.1| Exodeoxyribonuclease I [Shewanella baltica OS678]
gi|160860356|gb|ABX48890.1| Exodeoxyribonuclease I [Shewanella baltica OS195]
gi|315267073|gb|ADT93926.1| Exodeoxyribonuclease I [Shewanella baltica OS678]
Length = 472
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 209/365 (57%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+ + LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ + HP NKN +I NL D DI +I+ + + ED
Sbjct: 236 ISARNGCTTLISTVAHHPNNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + IHLN+ P + S K+LS R D A + K + + + +K+ L
Sbjct: 296 PIAVKQIHLNKCPFITS-AKILSDEHAARLGIDKEFAREQYK---RLKLHPELREKLALL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++S + D LY F S+ D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 352 FEHDDSRATTDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ +R ++ + L++E+LL+ +A+E K+L
Sbjct: 412 RARNYPELLDYEESQRWREFCQNRLADQD--------YVLKLENLLQDTQADETKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|422590676|ref|ZP_16665329.1| exonuclease I [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330877835|gb|EGH11984.1| exonuclease I [Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 476
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 191/320 (59%), Gaps = 11/320 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFTLRTKQKVQEHIH--LMKPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L D L D ++ L + ++ KE
Sbjct: 227 FSAARSYLGVVVPLAWHPHNRNALIVCDLHLDHSPLLQCDAETLKQRLYTRLDALKEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R K D+ A + A+ + N +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLKLDM--AGYQAR-AAQLSENREVWQDKLQV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L +L+F Y
Sbjct: 343 LYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPDLLFRY 402
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF ETLS +E RW+ +
Sbjct: 403 RARNFPETLSAEEQHRWQDF 422
>gi|398873738|ref|ZP_10628990.1| exonuclease I [Pseudomonas sp. GM74]
gi|398198583|gb|EJM85538.1| exonuclease I [Pseudomonas sp. GM74]
Length = 476
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 206/373 (55%), Gaps = 13/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LMQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARNYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLGLDAESLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IW-KKIF 236
+P+ +IH+N+ P V++ L VL R D+ + + S LN+T +W KI
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRQEDQQRLGLDMALYQQRV----SQLNDTRKVWLDKIL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFSQSQDPEQQLYDGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF +TL+ +E +RW+ + R + + N ++ F L A +L
Sbjct: 402 YRARNFPDTLNSEEQERWRIFCQKRLSDPEWGAPNTLDSFVDAAAQLSVSATAFQQGVLG 461
Query: 356 ALLMYGKSITQKI 368
Y + + Q++
Sbjct: 462 EWQDYVQGLRQRL 474
>gi|414071977|ref|ZP_11407934.1| exodeoxyribonuclease I [Pseudoalteromonas sp. Bsw20308]
gi|410805648|gb|EKS11657.1| exodeoxyribonuclease I [Pseudoalteromonas sp. Bsw20308]
Length = 483
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 207/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 118 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L+NF LR KK + + P + T
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALAELVDVFNMTPLVHTTSR 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ S + P+ HP+NKN +I ++L +P+ + +I ++R L K+ E ++
Sbjct: 238 IPATQGCTSWVAPMSFHPVNKNAVICFDLTQNPQVLIDLNIEELRKRLYTKRVDLAEGEL 297
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R + N+ + NT + K+
Sbjct: 298 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGINREQCLTNLAILKA---NTDLRDKVTEV 353
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P +L+ + FE+KK L+F Y
Sbjct: 354 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLKLDFEDKKFNTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ ETL+ +EL +W++Y ++ + ++ N F + +E+L A+EHD
Sbjct: 414 RARNWPETLNQQELDQWRQYCQNKLMHGEDQPSINAQDFMITLENL---AHEHDDSEKNL 470
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 471 TILKALYNYAQSM 483
>gi|298156950|gb|EFH98040.1| Exodeoxyribonuclease I [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 437
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 195/331 (58%), Gaps = 11/331 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L DP L +D ++ L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDPSPLLQDDAEILKQRLYTRHEALGEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSESREVWQDKLSV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 LYGKEDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNN 328
RARNF +TLS +E +RW+ + R + +
Sbjct: 403 RARNFPDTLSSEEQQRWQDFCQQRLSDPERG 433
>gi|399545711|ref|YP_006559019.1| Exodeoxyribonuclease I [Marinobacter sp. BSs20148]
gi|399161043|gb|AFP31606.1| Exodeoxyribonuclease I [Marinobacter sp. BSs20148]
Length = 507
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 209/374 (55%), Gaps = 14/374 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL++PY REW+N SRWDLI+V++ + L P GI WP K +G PSF+LE L+ N L
Sbjct: 135 LYRNLLDPYGREWQNGNSRWDLIDVVRLAHTLRPDGIEWPLKPDGSPSFRLEDLARANGL 194
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDA+SDV ATL LARLI+ PRLF F L+ + K+ + +P F+++
Sbjct: 195 EHGQAHDAMSDVTATLALARLIKERQPRLFEFALANKSKQAARKMLDTSTRKPVFHVSGK 254
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ H NKN +I ++L +P + + + KIR+ + +++ E +
Sbjct: 255 YPASQGSCALVAPVAEHASNKNQVIVYDLRENPDELINASVEKIRERVFTAQSALPEGVR 314
Query: 181 --PISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY--IWKK 234
P+ I LN+ P++ + L LS + + LN + ++ +IL ++
Sbjct: 315 RFPLKAIQLNKCPVLAPATMLAALSPERLQQ----LNLDGEQMRRHLAILRQAGPDFGQR 370
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ ++ ++ + + DE++Y F S D ++ +++P++L+ F F + +L E+
Sbjct: 371 VAAAFERDHDNKLTDPDEQIYAGGFFSPSDRSQMDRALAITPQQLAESEFQFTDPRLAEM 430
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN--EHDT 351
+F YRARN+ +TLS E++RW+++R R ++ + E++ L+ K +
Sbjct: 431 LFRYRARNYPDTLSADEMERWEQFREQRLTQPAKGWLSLAEYGAELQRLMAKPDVTRQQL 490
Query: 352 KILNALLMYGKSIT 365
IL L +YG++I+
Sbjct: 491 HILEELHLYGEAIS 504
>gi|336316617|ref|ZP_08571509.1| exonuclease I [Rheinheimera sp. A13L]
gi|335879082|gb|EGM76989.1| exonuclease I [Rheinheimera sp. A13L]
Length = 469
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 206/371 (55%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY RE ++ SRWDLI++++A Y L P GI WP K +G PSFKLE L+ N L
Sbjct: 103 LYRNFYEPYGRESQHGNSRWDLIDIVRACYALRPEGIVWPEKADGSPSFKLEDLTKANGL 162
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH++AHDALSDV AT+ +A+L++ P+LF ++L LRKK V P +++
Sbjct: 163 SHQRAHDALSDVYATIAIAKLVKEKQPKLFQYLLDLRKKTEVSKLFDLVNLTPLVHVSGR 222
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + +S + P+ HP NKN +I +NL DPK L D+ ++ L K ED
Sbjct: 223 FPAIQGCVSWIVPLAPHPTNKNAVICYNLQADPKPLLELDLACLQQLLYTKTADLDEDQQ 282
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ + +IH+N+ P V+S K LS D +++ N + I K+
Sbjct: 283 RLGLKLIHINKCP-VLSPAKTLSEQRAADLGIDRAACLQHLDWLRQ--NRSAIQPKVMEL 339
Query: 239 YKI-NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y++ + +E N D +LYN F+S +D ++ L MS +L++ F +L +L+FLY
Sbjct: 340 YQLPTDYTVETNPDYQLYNGFVSNEDKQRMEQLHLMSADQLASNPVLFSEDRLNQLLFLY 399
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNK--KNNLYNINMFYLEIESLLKKANEHDTK--I 353
RARN+ ++L+ +E +RW++YR + + K NL F L +E+L +A + K I
Sbjct: 400 RARNYPQSLTDQEQQRWQRYRSDKLTHGLDKPNL-TFEEFGLALENLAHEAGDDVKKMNI 458
Query: 354 LNALLMYGKSI 364
L AL Y +S+
Sbjct: 459 LKALFQYVQSL 469
>gi|392308613|ref|ZP_10271147.1| exonuclease I [Pseudoalteromonas citrea NCIMB 1889]
Length = 489
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 202/369 (54%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 124 LYRNFYDPYEREWQNGNSRWDIIDLVRACYALRPDGIEWPLKEDGTPSFKLEHLTVANGI 183
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+LF+F +LR KK +L I +P + +
Sbjct: 184 EHGAAHDALSDVTATIDLAKLIKTKQPKLFDFFFNLRNKKALLDIIDVFNMQPLVHTSSR 243
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP NKN ++ +NL +P+ L + ++R+ L K+ E D+
Sbjct: 244 IPATQGCTTWVAPMSFHPSNKNAVVCFNLTENPQVLLDLSVAELRERLYTKRVDMAEGDL 303
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++H+N+ PI+ +L N R D ++K ++F +
Sbjct: 304 PVGLKLVHVNKCPILAPAKTLLPENAA-RLGIDREQCLTHLKVLKEHPELRDKVAEVFNE 362
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ N D +LYN FISK D K A++R P L +N FE+ K ++F YR
Sbjct: 363 Q--GDFSATTNPDYQLYNGFISKSDKAKFAVVRDAQPSALGALNLEFEDAKFTTMLFRYR 420
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKK--ANEHDTKILN 355
ARN+ E LS EL W+KY ++ + ++N + F L +E+L+ + NE + +L
Sbjct: 421 ARNWPELLSPSELDSWRKYCQNKLMHGEDNPSISAEDFMLTLENLVHENDGNEKNLNVLK 480
Query: 356 ALLMYGKSI 364
+L Y +S+
Sbjct: 481 SLYHYAQSL 489
>gi|226945876|ref|YP_002800949.1| exonuclease I [Azotobacter vinelandii DJ]
gi|226720803|gb|ACO79974.1| Exodeoxyribonuclease I [Azotobacter vinelandii DJ]
Length = 476
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 209/372 (56%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G+ S +LE L+ N +
Sbjct: 110 LYRNFFDPYAREWQAGNSRWDLIDLLRTAYALRPEGIHWP-QEEGRVSLRLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDAL+DVRAT+ LARL+R P+L+ ++ LR K+ VL +I + RP +++
Sbjct: 169 EHGQAHDALADVRATIALARLLRERQPKLYGYLYQLRSKQRVLDQIR--LLRPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F+++ Y++++ P+ HP N+N LI +L DP L D +R L ++ ++
Sbjct: 227 FAAERGYLAVVLPLAWHPSNRNALIVCDLQADPSPLLDLDAEILRRRLYMRREELADNES 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK--CASSILNNTYIWKKIF 236
+P+ ++H+NR P V++ L VL + R + D+ + ++ CA+ + +I+
Sbjct: 287 PVPLKLVHINRCP-VLAPLSVLREEDIGRLRVDMAECQRRVELLCAAQGQWQEKL-ARIY 344
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + S+ + +++LY F ++D +R P+ L N+ F++++L EL+F
Sbjct: 345 MGDEFPASE---DPEQQLYGGFFGERDRRLCEQVRRAEPESLGRQNWGFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARNF ETL+ E + W+++ R + + F +++E LL +A+E IL
Sbjct: 402 YRARNFPETLTAAEGECWQEFCRRRLSDAAWGAPCTLGDFNVQLEQLLAQADEEHRPILV 461
Query: 356 ALLMYGKSITQK 367
A Y + + ++
Sbjct: 462 AWREYARQLLER 473
>gi|429211722|ref|ZP_19202887.1| exonuclease I [Pseudomonas sp. M1]
gi|428156204|gb|EKX02752.1| exonuclease I [Pseudomonas sp. M1]
Length = 477
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 198/374 (52%), Gaps = 17/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G + KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIQWPLNDEGVVTLKLERLTEANGL 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ +ARL+R P+L++F+ LR K VL ++ + +P +++
Sbjct: 170 EHGQAHDALSDVRATIAMARLLRQRQPKLYDFLYRLRGKHAVLDQVQ--LLKPLVHVSGR 227
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ S++SL+ P+ HP N+N LI +L DP L D +R L ++ E
Sbjct: 228 FSAARSFLSLVLPLAWHPRNRNALIVCDLGLDPAPLLELDAETLRQRLYTRREELGEGEL 287
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R DL A + A ++ W+ K+
Sbjct: 288 PVPLKLVHVNRCP-VLAPLAVLREQDQARLGIDL--AVWQAR-AQVLVEGKPQWQDKLAA 343
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ N + +++LY+ FI +D +R P +L + F++ +L EL+F Y
Sbjct: 344 IYEQENFPGVADPEQQLYDGFIGDRDRRLCEQVRQADPVRLGREQWPFDDPRLVELLFRY 403
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
RARNF ETLS E ++W+++ R Y N L N F + + L+ +
Sbjct: 404 RARNFPETLSTAEQEQWREFCRCRLMLDEYGAPNTLAN---FEVALAEQLENTGLQGRAL 460
Query: 354 LNALLMYGKSITQK 367
L Y ++ Q+
Sbjct: 461 LQEWQAYAAALRQR 474
>gi|315126831|ref|YP_004068834.1| exonuclease I [Pseudoalteromonas sp. SM9913]
gi|315015345|gb|ADT68683.1| exonuclease I [Pseudoalteromonas sp. SM9913]
Length = 481
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 208/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 116 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L++F SLR KK + + P + +
Sbjct: 176 EHAAAHDALSDVTATIALAKLIKEKQPKLYHFFFSLRNKKALAELVDVFNMTPLVHTSSR 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L +P+ L ++ ++R L K+ E D+
Sbjct: 236 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQNPQVLLDLNVEQLRKRLYTKRIDLAEGDL 295
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 296 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTELRDKVTEV 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P+ L+++ FE+ K L+F Y
Sbjct: 352 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPEDLASLKLEFEDPKFNTLLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK---- 352
RARN+ +TL+ +EL +W++Y S+ + ++ + F + +E+L A+EHD
Sbjct: 412 RARNWPQTLNQQELDQWRQYCQSKLMHGEDQPSISAQDFMITLENL---AHEHDDSEKNL 468
Query: 353 -ILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 469 TILKALYNYAQSM 481
>gi|398937584|ref|ZP_10667329.1| exonuclease I [Pseudomonas sp. GM41(2012)]
gi|398166865|gb|EJM54953.1| exonuclease I [Pseudomonas sp. GM41(2012)]
Length = 476
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 190/318 (59%), Gaps = 10/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ VN +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRITLKLERLTAVNGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRGKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP NKN LI +L DP+ L D + +R L +++ E
Sbjct: 227 FSAARNYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDADTLRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL S R + D++ + A + + +W+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRSEDQQRLELDMSLYQER---ALRLSDAQTVWRDKVQA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ FI +D +RS P +L+ + F++++L EL+F Y
Sbjct: 343 MYASEAFTSSQDPEQQLYDGFIGDRDRRLCEQVRSADPAQLAQQQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TL+++E +RW+
Sbjct: 403 RARNFPDTLNFEEQERWR 420
>gi|312962787|ref|ZP_07777274.1| exodeoxyribonuclease I [Pseudomonas fluorescens WH6]
gi|311282814|gb|EFQ61408.1| exodeoxyribonuclease I [Pseudomonas fluorescens WH6]
Length = 475
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 18/375 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIEWP-QQDGRVTLKLERLTAANAI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R PRL++++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVREKQPRLYDWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDTDAETLRQRLYTRRDDLAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL + R + L+ A + A + + +W+ K+
Sbjct: 286 PVPLKLVHVNRCP-VVAPLSVLRAE--DRERLQLDMAVYQAR-ALRLTDAQELWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ FI +D +R P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAQEEFAANADPEQQLYDGFIGDRDRRLCEQVRMAEPSQLARAQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK----NNLYNINMFYLEIESLLKKANEHDTKI 353
RARNF +TL +E +RWK + R N + N L LE L A ++
Sbjct: 402 RARNFPDTLDSEEQQRWKLFCQQRLSNPEWGAPNTLEAFKQARLE---LAVSATPFQQQV 458
Query: 354 LNALLMYGKSITQKI 368
L Y S+ ++
Sbjct: 459 LGQWQEYADSLAARL 473
>gi|88859960|ref|ZP_01134599.1| exodeoxyribonuclease I [Pseudoalteromonas tunicata D2]
gi|88817954|gb|EAR27770.1| exodeoxyribonuclease I [Pseudoalteromonas tunicata D2]
Length = 483
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 203/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+N SRWD+I++++A Y L P GI WP K +G PSF+LE L+ N +
Sbjct: 118 FYRNFYDPYAREWQNGNSRWDIIDLVRACYALRPEGIQWPLKEDGTPSFRLEDLTKANGI 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI++ P+L++F LR KK V P + +
Sbjct: 178 EHAAAHDALSDVTATIALAKLIKDKQPKLYDFFFKLRFKKAVAELFDIYNMVPLVHTSSK 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP+NKN +I +NL HDP+ L ++IR L K+ E+
Sbjct: 238 IPASQGCTTWIAPMAFHPVNKNAVICFNLTHDPRPLLALSADEIRARLYTKRAELAENEQ 297
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + ++HLN+ PIV +L N + D N+ + + + + +K+
Sbjct: 298 PIGLKLVHLNKCPIVAPAKTLLPENAA-KIGIDREQCLANL---AILKAHPELREKVAEV 353
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ N N D +LY F S D K I+R+ P +L+ + FE+KK + L+F Y
Sbjct: 354 FQSENEFAGSENCDYQLYAGFTSNADKHKFDIIRAAEPDQLATLGLDFEDKKFDTLLFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLK--KANEHDTKIL 354
RARN+ TL+ EL++W+KY ++ Y + + + F + +E+L+ + NE + IL
Sbjct: 414 RARNWPHTLTTAELEKWRKYCQNKLMYGEDSPAIDAQEFMMTLENLVHENEGNERNMTIL 473
Query: 355 NALLMYGKSI 364
AL Y +++
Sbjct: 474 KALYHYAQNL 483
>gi|24374325|ref|NP_718368.1| exodeoxyribonuclease I SbcB [Shewanella oneidensis MR-1]
gi|24348874|gb|AAN55812.1| exodeoxyribonuclease I SbcB [Shewanella oneidensis MR-1]
Length = 470
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 203/369 (55%), Gaps = 18/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N +RWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNTRWDIIDLVRACYAFRPDGIHWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+ + LR+K+ V A+I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKEKQPKLYQYYFELRRKQAVSAQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ H +L+ P+ HP NKN +I NL D D+ +I+ + + +D
Sbjct: 234 ISAMHGCTTLIAPVAHHPSNKNAIICVNLAMDLSPLFELDVEQIKTRMYTPRAELADDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ P + S K+L R D A K + + + +K+
Sbjct: 294 PIPVKQVHLNKCPFITS-AKILDDAQAERLSIDKAFARGQYK---RLKAHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + + D LY F S D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 350 FEHDGEATTTDPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALDLQFDDGRIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L +E RW+ + R ++ + L++E+LL+ + +EH K+L
Sbjct: 410 RARNYPELLDDQESHRWRTFCQQRLADQD--------YLLKLENLLQDTEGDEHKQKLLA 461
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 462 ALCHYLRGL 470
>gi|418295834|ref|ZP_12907680.1| exonuclease I [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379067163|gb|EHY79906.1| exonuclease I [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 478
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 206/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P G+ WP + G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGLVWP-EEEGRVTLKLERLSVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R+ P+L++++ +LR+K+ VL +I + P +++
Sbjct: 169 EHLNAHDALSDVRATIALARLVRSYQPKLYDYLFNLRRKQAVLEQIN--LLEPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L + L +R L + +
Sbjct: 227 FSAARHFLSVVLPLAWHPRNRNALIVCDLQAETGPLLQESAETLRRRLYTRHDQLAVGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---- 234
+P+ +IH+NR P V++ LKVL + + R D++ A+++ + ++W
Sbjct: 287 PVPLKLIHVNRCP-VVAPLKVLRAQDIQRLGVDMSVCLGR---AAALRDQKHVWGGKLDD 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ + SD + +++LY+ F+ ++D +R+++P +L+ + F++ +LEEL+
Sbjct: 343 VYREEGFVGSD---DPEQQLYDGFLGERDRRLCDQIRNLTPAELARQQYHFDDARLEELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS +E W ++ R + N + F EI+ + A ++
Sbjct: 400 FRYRARNFPEALSVEEKSHWYRFCQQRLSEEACGAPNTLGQFDTEIQRFMATATPAQQQL 459
Query: 354 LNALLMYGKSITQK 367
L YG + ++
Sbjct: 460 LQQWHAYGSEMRER 473
>gi|424924580|ref|ZP_18347941.1| Exonuclease I [Pseudomonas fluorescens R124]
gi|404305740|gb|EJZ59702.1| Exonuclease I [Pseudomonas fluorescens R124]
Length = 476
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 195/341 (57%), Gaps = 10/341 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + GK + KLE L+ N++
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGKVTLKLERLTAANHI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARHYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL ++ R D+ A + A + + +WK K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLSVLRADDQQRLGLDM--ALYQAR-ALRLSDAQQVWKDKVAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ ++ F++++L EL+F Y
Sbjct: 343 IYASEDFTPSEDPEQQLYDGFIGDRDRRLCEQVRTADPAQLAQEHWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLE 338
RARNF +TL+ +E +RW+ + R + N + E
Sbjct: 403 RARNFPDTLNSEEQERWRIFCQQRLSEPQMGAPNTLQSFAE 443
>gi|389682140|ref|ZP_10173483.1| exodeoxyribonuclease I [Pseudomonas chlororaphis O6]
gi|388554014|gb|EIM17264.1| exodeoxyribonuclease I [Pseudomonas chlororaphis O6]
Length = 476
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 202/372 (54%), Gaps = 17/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWPRDEEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LA+LIR+ P+L+ ++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALAKLIRDKQPKLYEWLFQLRSKQKVMDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L DP+ L D +R L ++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAETLRQRLYTRREDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL R + D+ +K A + + +W+ K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLNVLRGEDQQRLQLDM-AEYKAR--ALRLSDAQEVWRDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + L+ +++LY+ FI +D +R+ P L + F++++L EL+F Y
Sbjct: 343 IYASEDFAPSLDPEQQLYDGFIGDRDRRLCEQVRNAEPVHLGQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
RARNF +TL+ +E +RWK + R + N L + N E LL A ++
Sbjct: 403 RARNFPDTLNGEEQERWKTFCQQRLCDPQWGAPNTLESFNQAAAE---LLASATSIQRQV 459
Query: 354 LNALLMYGKSIT 365
L+ Y +S+
Sbjct: 460 LDEWQDYSRSLA 471
>gi|126667153|ref|ZP_01738127.1| exonuclease I [Marinobacter sp. ELB17]
gi|126628309|gb|EAZ98932.1| exonuclease I [Marinobacter sp. ELB17]
Length = 507
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 209/374 (55%), Gaps = 14/374 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWDLI+V++ Y L P GI WP K +G PSF+LE L+ N L
Sbjct: 135 LYRNLRDPYGREWQNGNSRWDLIDVVRLAYTLRPEGIEWPLKPDGSPSFRLEDLARANGL 194
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDA+SDV ATL LARLI+ PRLF F + + K+ + +P F+++
Sbjct: 195 EHGQAHDAMSDVTATLALARLIKERQPRLFEFARANKSKQAARKMLDTSTRKPVFHVSGK 254
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ H NKN +I ++L +P + + +++IR+ + +++ E +
Sbjct: 255 YPASQGSCALVAPVAEHASNKNQVIVYDLRENPDELINASVDQIRERVFTAQSALPEGVR 314
Query: 181 --PISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY--IWKK 234
P+ I LN+ P++ + L LS + + LN + ++ +IL ++
Sbjct: 315 RFPLKAIQLNKCPVLAPATMLAALSPERLQQ----LNLDGEQMRRHLAILRQAGPDFGQR 370
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ ++ + + DE++Y F S D +L +++P++L+ F F +++L E+
Sbjct: 371 VAAAFERDYDTKLTDPDEQIYAGGFFSPSDRTQLDRALAITPQQLAESEFQFTDQRLAEM 430
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN--EHDT 351
+F YRARN+ +TLS ++++RW+++R R ++ + E++ L+ K + +
Sbjct: 431 LFRYRARNYPDTLSGEDMERWEQFREQRLTQPAKGWLSLAEYGAELQRLMAKPDVTQQQR 490
Query: 352 KILNALLMYGKSIT 365
IL L +YG++I+
Sbjct: 491 HILEELHLYGEAIS 504
>gi|402698952|ref|ZP_10846931.1| exonuclease I [Pseudomonas fragi A22]
Length = 481
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 208/372 (55%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP ++ G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWP-EDEGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR+ P+L+ ++ LR K+ VL ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIRDKQPKLYEWLFKLRTKQRVLDQVR--LLQPMLHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y ++ P+ HP N+N LI ++L DP+ L D +R L ++ E
Sbjct: 226 FSAARHYAGVVLPLAWHPKNRNALIVYDLHFDPQPLLDMDAESLRQMLYTRREDLAEGQQ 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+ + +IH+NR P V++ L V+ + R + D+ A + A++++ +W+ K+
Sbjct: 286 PVALKLIHVNRCP-VVAPLNVVRAQDQQRLQLDM--ALYQAR-AATLIEAQQVWQDKLSA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ F+ ++D +R P++L+ + F++++L EL+F Y
Sbjct: 342 IYASEDFVPAADPEQQLYDGFLGERDRRLCEQVRLSDPEQLAGTTWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTKILNA 356
RARNF TLS +EL+RW+ + R + ++ F L + A K+L+
Sbjct: 402 RARNFPHTLSAEELERWQLFCRQRLTDPAMGAPLTLDDFTRAALELSRSAKPAQLKLLSE 461
Query: 357 LLMYGKSITQKI 368
Y + + +++
Sbjct: 462 WQRYAQGLGRRL 473
>gi|395496765|ref|ZP_10428344.1| exonuclease I [Pseudomonas sp. PAMC 25886]
Length = 475
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 209/375 (55%), Gaps = 18/375 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R P+L++++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVREKQPKLYDWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D + +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDEDADTLRKRLYTRRDDLAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL + R + D++ + A + + +W+ K+
Sbjct: 286 PVPLKLLHINRCP-VVAPLSVLRAQDRERLQLDMD---EYAARALRLSDAQELWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P++L+ + F++++L EL+F Y
Sbjct: 342 IYAEEDFASSADPEQQLYDGFIGDRDRRLCEQVRVAEPEQLARQQWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
RARNF ETL+ +E +RW+ + R + N L + LE L A ++
Sbjct: 402 RARNFPETLNSEEQQRWRVFCQQRLSDPQWGAPNTLEDFKQARLE---LAVSATPFQRQV 458
Query: 354 LNALLMYGKSITQKI 368
L+ Y S+ ++
Sbjct: 459 LDEWQEYVDSLATRM 473
>gi|37526737|ref|NP_930081.1| exonuclease I [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36786169|emb|CAE15221.1| exodeoxyribonuclease I (exonuclease I) (DNA
deoxyribophosphodiesterase) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 476
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 202/371 (54%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PR+FN+ LR K+ + A I P +P +++
Sbjct: 174 VEHSHAHDAMSDVYATIAMAKLLKEVQPRMFNYFFQLRNKQKINALIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S +SL+ P+ HP N+N +I +L D L D + +R+ L + + + D
Sbjct: 234 MFGAARSNLSLVAPLAWHPANQNAVIVCDLAGDISPLLELDADALRERLYTRHDELQPDQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ PIV + L + R D + +N+ + + NN I +K+
Sbjct: 294 PPVPIKLVHINKCPIVAPD-NTLRTEDAERIGLDRDYCGRNL---AILQNNPQIREKVVE 349
Query: 238 DYKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ E N+D +LY+ F S D + I+R P+ L ++ F++ +++ L+F
Sbjct: 350 LFAEAEPFPESNNVDTKLYDGFFSSADKAAMNIIRETLPQNLPALDLTFQDSRIKTLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKIL 354
YRARN+ TL+Y E + W ++R F K ++ ++ IE L + NE + L
Sbjct: 410 YRARNYPTTLTYDEQQHWLRHRQEIFTQDK-----LSEYFFIIEQLFTEYQGNEEKCRQL 464
Query: 355 NALLMYGKSIT 365
AL+ Y +
Sbjct: 465 KALMEYAVQLA 475
>gi|237798642|ref|ZP_04587103.1| exonuclease I [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021495|gb|EGI01552.1| exonuclease I [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 476
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 199/336 (59%), Gaps = 13/336 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRTKQKVQDQVR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ +L + ++ +E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLQYDAETLKQHLYTRHDALEEGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNT-YIWK-KIF 236
+P+ ++H+NR P V++ L VL S R + DL + ++ LN++ +W+ K+
Sbjct: 287 PVPLKLLHINRCP-VVAPLGVLRSEDQQRLQLDLTA----YQARAAQLNDSREVWQDKLQ 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F
Sbjct: 342 VLYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDGWPFDDARLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNI 332
YRARNF +TLS +E +RW + R + ++ N
Sbjct: 402 YRARNFPDTLSTEEQQRWLAFCQQRLRSPESGAPNT 437
>gi|294141308|ref|YP_003557286.1| exodeoxyribonuclease I [Shewanella violacea DSS12]
gi|293327777|dbj|BAJ02508.1| exodeoxyribonuclease I [Shewanella violacea DSS12]
Length = 470
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 207/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+ SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQKGNSRWDIIDLVRACYAFRPEGIEWPLKEDGTPSFKLEHLTKANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+LF++ LR+K+ V ++ +P +++
Sbjct: 174 SHEKAHDAMSDVYATIDMAKLIKQKQPKLFDYYFQLRRKQEVSKQLDVLNMQPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S++H +L+ P+ H NKN +I NL D + D +IRD + +++ D +
Sbjct: 234 ISAEHGCTTLIAPVAHHSTNKNAIICVNLAMDISPLIELDAEQIRDRMYTRRDDLAADEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PIS+ IH+N+ P V S K+L+ L R D A + K + + + +K+
Sbjct: 294 PISVKQIHINKCPFVTSP-KILTDELAQRLNIDKAFAREQYKL---LKQHPELREKLVAV 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + + + D +LY F S D K+ I+R P+ L+ + F F++++L+E++F Y
Sbjct: 350 FDVEHDNASQDPDFQLYSGGFFSSADKEKMEIIRHTLPQNLAALEFNFDDQRLKEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
RARN+ TL E +W+ + +R + + + + +E+L+ NE K+L
Sbjct: 410 RARNYPATLDESESMKWRDFCQTRLDDPE--------YMIRLENLVNDTTDNEDKQKLLT 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|28871453|ref|NP_794072.1| exodeoxyribonuclease I [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28854704|gb|AAO57767.1| exodeoxyribonuclease I [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 476
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 193/329 (58%), Gaps = 11/329 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFTLRTKQKVQEHIH--LMKPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L D L D ++ L + ++ KE
Sbjct: 227 FSAARSYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLQCDAETLKQRLYTRLDALKEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R K D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLKLDM--AGYQAR-AAQLSESLEVWQDKLQV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L +L+F Y
Sbjct: 343 LYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPDLLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK 326
RARNF ETLS E RW+ + R + +
Sbjct: 403 RARNFPETLSADEQHRWQDFCRQRLSSPE 431
>gi|213970280|ref|ZP_03398410.1| exodeoxyribonuclease I [Pseudomonas syringae pv. tomato T1]
gi|301382938|ref|ZP_07231356.1| exonuclease I [Pseudomonas syringae pv. tomato Max13]
gi|302063791|ref|ZP_07255332.1| exonuclease I [Pseudomonas syringae pv. tomato K40]
gi|302133521|ref|ZP_07259511.1| exonuclease I [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422659395|ref|ZP_16721821.1| exonuclease I [Pseudomonas syringae pv. lachrymans str. M302278]
gi|213924952|gb|EEB58517.1| exodeoxyribonuclease I [Pseudomonas syringae pv. tomato T1]
gi|331018014|gb|EGH98070.1| exonuclease I [Pseudomonas syringae pv. lachrymans str. M302278]
Length = 476
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 190/320 (59%), Gaps = 11/320 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFTLRTKQKVQEHIH--LMKPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L D L D ++ L + ++ KE
Sbjct: 227 FSAARSYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLQCDAETLKQRLYTRLDALKEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R K D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLKLDM--AGYQAR-AAQLSESLEVWQDKLQV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L +L+F Y
Sbjct: 343 LYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPDLLFRY 402
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF ETLS E RW+ +
Sbjct: 403 RARNFPETLSADEQHRWQDF 422
>gi|398851219|ref|ZP_10607907.1| exonuclease I [Pseudomonas sp. GM80]
gi|398247040|gb|EJN32505.1| exonuclease I [Pseudomonas sp. GM80]
Length = 476
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 208/372 (55%), Gaps = 11/372 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N++
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANHI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVMPLAWHPKNRNALIVCDLHLDPQGLLDLDAQTLRQRLYTRRDDLLEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL + R D+ A + A + + +WK K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLSVLRAEDQQRLGLDM--ALYQAR-ALRLTDAQQVWKDKVAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ + F++++L EL+F Y
Sbjct: 343 IYASEDFTPSEDPEQQLYDGFIGDRDRRLCEQVRASDPAQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TL+ +E +RW+ + R + N + F E L A + ++N
Sbjct: 403 RARNFPDTLNSEEQERWRIFCQQRLSVPEWGAPNTLTSFINTAEQWLLSATPMQSAVINE 462
Query: 357 LLMYGKSITQKI 368
Y +++ +++
Sbjct: 463 WQNYVQALRKRL 474
>gi|336311176|ref|ZP_08566143.1| exodeoxyribonuclease I [Shewanella sp. HN-41]
gi|335865392|gb|EGM70418.1| exodeoxyribonuclease I [Shewanella sp. HN-41]
Length = 470
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 204/365 (55%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+ + LR+K+ V +I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKEKQPKLYQYYFDLRRKQAVADQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ + +L+ P+ HP NKN +I NL D D+ +I+ + + ED
Sbjct: 234 ISALNGCTTLIAPVAHHPSNKNAVICVNLAMDLTPLFELDVEQIKTRMYTARADLAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+ P + S K+L R D A + K + ++ + +K+
Sbjct: 294 PIPVKQIHLNKCPFITS-AKILDDVQAARLNIDKAFAREQYK---RLKSHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++++ + D LY F S D K+ I+R P+ L+ + F++ ++ E++F Y
Sbjct: 350 FELDGESSTTDPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALELQFDDARIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L Y+E +RW+++ R ++ + L++E+LL+ + +E K+L
Sbjct: 410 RARNYPELLDYQESQRWREFCQGRLADQD--------YLLKLENLLQDTETDEIKQKLLT 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|422653566|ref|ZP_16716329.1| exonuclease I, partial [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330966612|gb|EGH66872.1| exonuclease I [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 431
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 190/320 (59%), Gaps = 11/320 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFTLRTKQKVQKHIH--LMKPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L D L D ++ L + ++ KE
Sbjct: 227 FSAARSYLGVVVPLAWHPHNRNALIVCDLHLDHSPLLQCDAETLKQRLYTRLDALKEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R K D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLKLDM--AGYQAR-AAQLSESREVWQDKLQV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L +L+F Y
Sbjct: 343 LYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPDLLFRY 402
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF ETLS E RW+ +
Sbjct: 403 RARNFPETLSTAEQHRWQDF 422
>gi|425901158|ref|ZP_18877749.1| exodeoxyribonuclease I [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883538|gb|EJL00025.1| exodeoxyribonuclease I [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 476
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 192/346 (55%), Gaps = 14/346 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWPRDEEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR+ P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRDKQPKLYEWLFQLRSKQKVMDQVR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L DP+ L D +R L ++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLELDAETLRQRLYTRREDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL R + D+ +K A + + +W+ K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLNVLRGEDQQRLQLDM-AEYKAR--ALRLSDAQEVWRDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + ++ +++LY+ FI +D +R+ P L + F++++L EL+F Y
Sbjct: 343 IYASEDFAPSVDPEQQLYDGFIGDRDRRLCEQVRNAEPLHLGQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEI 339
RARNF ETL+ +E +RWK + R + N L + N E+
Sbjct: 403 RARNFPETLNGEEQERWKSFCQQRLCDPQWGAPNTLESFNQAAAEL 448
>gi|407363426|ref|ZP_11109958.1| exonuclease I [Pseudomonas mandelii JR-1]
Length = 476
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 194/346 (56%), Gaps = 10/346 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRGKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ +
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLADGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL + R D+ + S + +W+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRPDDQQRLGLDMALYQDRVLRLS---DAQQVWRDKVLA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +LS + F++++L EL+F Y
Sbjct: 343 IYASEDFTPSRDPEQQLYDGFIGDRDRRLCEQVRAADPAQLSQQQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL 343
RARNF +TL+ +E +RW+ + R + N ++E + L
Sbjct: 403 RARNFPDTLNSEEQERWQTFCQQRLSTPEWGAPNTLESFVEAAAQL 448
>gi|398995466|ref|ZP_10698349.1| exonuclease I [Pseudomonas sp. GM21]
gi|398129840|gb|EJM19194.1| exonuclease I [Pseudomonas sp. GM21]
Length = 476
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 202/361 (55%), Gaps = 13/361 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFKLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYIRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL + R D+ + A +++ +W+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRPDDQQRLGLDMALYQER---ALRLIDAQQVWRDKVQA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ + F++++L EL+F Y
Sbjct: 343 IYTSEDFTPSQDPEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +TL+ +E +RW+ + R + + + E + L NE T + A+
Sbjct: 403 RARNFPDTLNSEEQERWRLFCQKRLSAPEWGAPHTLKSFTEAAAQL---NETATPLQRAV 459
Query: 358 L 358
L
Sbjct: 460 L 460
>gi|422299874|ref|ZP_16387423.1| exodeoxyribonuclease I [Pseudomonas avellanae BPIC 631]
gi|407988089|gb|EKG30719.1| exodeoxyribonuclease I [Pseudomonas avellanae BPIC 631]
Length = 476
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 190/320 (59%), Gaps = 11/320 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFTLRTKQKVQEHIH--LMKPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L D L D ++ L + ++ KE
Sbjct: 227 FSAARSYLGVVVPLAWHPHNRNALIVCDLHLDHSPLLQCDAETLKQRLYTRLDALKEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P VI+ L VL S R K D+ A + A+ + + +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLKLDM--AGYQAR-AAQLSESREVWQDKLQV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L +L+F Y
Sbjct: 343 LYGKDDFVASEDPEQQLYDGFIGDRDRRLSEQVRQAEPEQLARDAWPFDDARLPDLLFRY 402
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF ETLS E RW+ +
Sbjct: 403 RARNFPETLSTAEQHRWQDF 422
>gi|385332116|ref|YP_005886067.1| exonuclease I [Marinobacter adhaerens HP15]
gi|311695266|gb|ADP98139.1| exonuclease I [Marinobacter adhaerens HP15]
Length = 481
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 200/371 (53%), Gaps = 11/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ Y L P GI WP K +G PSFKLE L+ N +
Sbjct: 110 LYRNLRDPYAREWQNGNSRWDIIDMVRLTYALRPEGINWPRKEDGSPSFKLEELTVANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F+L + K A + +P F+I+
Sbjct: 170 AHEAAHDAMSDVEATIAMAKLIKEKQPKLFDFVLQNKDKHSARAMLDTAAMKPVFHISAK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ HP NKN++I ++L DP + + +IR+ + + E +
Sbjct: 230 YPASRGCCALVAPVAEHPSNKNLVIVYDLREDPTELINASAEQIRERVFTSQAELGEGVS 289
Query: 181 --PISMIHLNRSPIVISN--LKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P+ + LN+ P++ L LS + D + N+ + + F
Sbjct: 290 RFPLKGVQLNKCPVLAPANMLSTLSPERLEELALDGDTLRANLAMLRKAPDLPSRIAEAF 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + SDL + DE+LY FISK D KL + + L + FE+ +L+EL+F
Sbjct: 350 --DQPHESDL-TDPDEQLYAGGFISKADREKLNWVLEQPVETLGELEVTFEDDRLQELLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +L +E++RW+++R R + K ++ F E++ L K I
Sbjct: 407 RYRARNYPGSLVGEEMERWEEFRSQRLMHPKKGWRSLEAFAQELQRLAADPELTPQKRHI 466
Query: 354 LNALLMYGKSI 364
L L +YG+S+
Sbjct: 467 LEDLHLYGESL 477
>gi|399010047|ref|ZP_10712426.1| exonuclease I [Pseudomonas sp. GM17]
gi|398108071|gb|EJL98058.1| exonuclease I [Pseudomonas sp. GM17]
Length = 476
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 201/370 (54%), Gaps = 13/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWPRDEEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR+ P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRDKQPKLYEWLFQLRTKQKVMDQVR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L DP+ L D +R L ++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAETLRQRLYTRREDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IWK-KIF 236
+P+ +IH+NR P V++ L VL R + D+ K + L++ +W+ K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLNVLRGEDQQRLQLDM----AEYKARTLRLSDAQEVWRDKLA 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + ++ +++LY+ FI +D +R+ P L + F++++L EL+F
Sbjct: 342 AIYASEDFAPSVDPEQQLYDGFIGDRDRRLCEQVRNAEPLHLGQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF ETL+ +E +RWK + R + + N + F + L A ++L+
Sbjct: 402 YRARNFPETLNGEEQERWKSFCQQRLCDPQWGAPNTLESFNQAADELRLSATTIQRQVLD 461
Query: 356 ALLMYGKSIT 365
Y +S+
Sbjct: 462 EWQDYSRSLA 471
>gi|358448778|ref|ZP_09159273.1| exonuclease I [Marinobacter manganoxydans MnI7-9]
gi|357226928|gb|EHJ05398.1| exonuclease I [Marinobacter manganoxydans MnI7-9]
Length = 481
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 199/371 (53%), Gaps = 11/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ Y L P GI WP K +G PSFKLE L+ N +
Sbjct: 110 LYRNLRDPYAREWQNGNSRWDIIDMVRLTYALRPDGINWPRKEDGSPSFKLEALTVANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ PRLF+F+L + K A + +P F+I+
Sbjct: 170 THEAAHDAMSDVEATIAVAKLIKEKQPRLFDFVLQNKDKHSARAMLDTATMKPVFHISAK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ HP NKN++I ++L DP + + +IR+ + + E +
Sbjct: 230 YPATRGCCALVAPVAEHPTNKNLVIVYDLREDPSELIAASAEQIRERVFTSQAELGEGVS 289
Query: 181 --PISMIHLNRSPIVISN--LKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P+ + LN+ P++ L LS + D + N+ + + F
Sbjct: 290 RFPLKGVQLNKCPVLAPANMLSTLSPERLEELALDGDTLRANLAMLRKAPDLPARIAEAF 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + S+L + DE+LY FISK D KL + + L + FE+ +L+EL+F
Sbjct: 350 --DQPHESEL-TDPDEQLYAGGFISKTDREKLNWVLEQPVETLGELEVTFEDDRLQELLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
YRARN+ +L +E++RW+++R R + K ++ F E++ L I
Sbjct: 407 RYRARNYPGSLMGEEMERWEEFRSQRLMHPKKGWRSLEAFAQELQRLAADPELTPERRHI 466
Query: 354 LNALLMYGKSI 364
L L +YG+S+
Sbjct: 467 LEDLHLYGESL 477
>gi|422604834|ref|ZP_16676849.1| exonuclease I, partial [Pseudomonas syringae pv. mori str. 301020]
gi|330888491|gb|EGH21152.1| exonuclease I [Pseudomonas syringae pv. mori str. 301020]
Length = 363
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 205/366 (56%), Gaps = 12/366 (3%)
Query: 8 NPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAH 67
+PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N + H +AH
Sbjct: 3 DPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGIDHGQAH 61
Query: 68 DALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHS 127
DALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+ FS+ +
Sbjct: 62 DALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGRFSAARN 119
Query: 128 YISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISM 184
Y+ ++ P+ HP N+N LI +L DP L +D ++ L + + E +P+ +
Sbjct: 120 YLGVVLPLAWHPHNRNALIVCDLHLDPSPLLQDDAEILKQRLYTRHEALGEGELPVPLKL 179
Query: 185 IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINN 243
+H+NR P VI+ L VL S R + D+ A+ + + +W+ K+ + Y +
Sbjct: 180 LHINRCP-VIAPLGVLRSEDQQRLQLDMAGYQAR---ATQLSESREVWQDKLSVLYGKED 235
Query: 244 SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFI 303
+ +++LY+ FI +D +R P++L+ + F++ +L EL+F YRARNF
Sbjct: 236 FAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRYRARNFP 295
Query: 304 ETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNALLMYGK 362
+TLS +E +RW+ + R + + N + F + A ++L Y +
Sbjct: 296 DTLSSEEQQRWQDFCQQRLSDPERGAPNTLKDFATALAECSLSAAPEQLEVLRQWQDYAQ 355
Query: 363 SITQKI 368
++++++
Sbjct: 356 ALSKRL 361
>gi|398841731|ref|ZP_10598940.1| exonuclease I [Pseudomonas sp. GM102]
gi|398107659|gb|EJL97654.1| exonuclease I [Pseudomonas sp. GM102]
Length = 476
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 199/349 (57%), Gaps = 10/349 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPKDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARNYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAEALRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +IH+N+ P V++ L VL + + + L+ A + A + + +W+ D
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRP--LDQQRLGLDMALYQER-ALRLSDAQQVWRDKVSD 342
Query: 239 -YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R+ P +L+ + F++++L EL+F Y
Sbjct: 343 IYSSDDFSPSQDPEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA 346
RARNF +TLS +E +RW+ + R + N +LE+ + L +
Sbjct: 403 RARNFPDTLSLEEQERWRIFCQKRLCAPEWGAPNTLDSFLEVAAQLTTS 451
>gi|398902735|ref|ZP_10651224.1| exonuclease I [Pseudomonas sp. GM50]
gi|398178085|gb|EJM65742.1| exonuclease I [Pseudomonas sp. GM50]
Length = 476
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 203/359 (56%), Gaps = 11/359 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPKDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARHYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +IH+N+ P V++ L VL + + + L+ A + A + + +W+ D
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRP--LDQQRLGLDMALYQER-ALRLSDAQQVWRDKVSD 342
Query: 239 -YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R+ P +L+ + F++++L EL+F Y
Sbjct: 343 IYARDDFSPSQDPEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIES-LLKKANEHDTKILN 355
RARNF +TLS +E +RW+ + R + N +LE+ + L+ A ++L+
Sbjct: 403 RARNFPDTLSLEEQERWRIFCQKRLCAPEWGAPNTLDSFLEVAAQLMTSATSFQREVLD 461
>gi|146308334|ref|YP_001188799.1| exonuclease I [Pseudomonas mendocina ymp]
gi|145576535|gb|ABP86067.1| Exodeoxyribonuclease I subunit C [Pseudomonas mendocina ymp]
Length = 481
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 204/371 (54%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWP-QEEGRVSLKLERLTQANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+GLARL+R PRL++F+ LR K+ V+ +I + +P +++
Sbjct: 169 DHGQAHDALSDVRATIGLARLLRERQPRLYDFLYQLRSKQRVMDQIR--LLQPLLHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
FS+ Y++ + P+ HP N+N LI +L DP L D + +R L ++ E
Sbjct: 227 FSAARHYLAPVLPLAWHPRNRNALIVCDLQADPAPLLELDADTLRARLYTRREDLAEHEA 286
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R + D + +N A + +W+ K+
Sbjct: 287 PVPLKLLHINRCP-VVAPLSVLRDADRQRLQLDWSVCERN---AERLKAAQALWQDKLPT 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + +++LY+ FI +D +R+ P+ L++ N+ F++ +L EL+F Y
Sbjct: 343 IYREEAFAASTDPEQQLYDGFIGDRDRRLCEQVRNAQPQALASQNWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ++LS E +RW ++ R + + N + F ++ L ++L
Sbjct: 403 RARNFPDSLSPTEQQRWMEFCRLRLNDAQYGAPNTLAQFRAALDELAASCTPSQLQLLQQ 462
Query: 357 LLMYGKSITQK 367
+ +++ Q+
Sbjct: 463 WQAHARTLQQR 473
>gi|329895211|ref|ZP_08270875.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC3088]
gi|328922449|gb|EGG29791.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC3088]
Length = 480
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 208/378 (55%), Gaps = 26/378 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY RE+++ SRWDLI++++A Y L P GI WP ++G S KLE L+ N +
Sbjct: 110 LYRNFFDPYGREYQDGNSRWDLIDLVRASYALRPEGIEWPMSDDGFMSAKLERLTAANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDAL DV+AT+ LA+LI+ P+LF + L LR K+ ++ RP +++ M
Sbjct: 170 EHAGAHDALVDVKATIELAKLIKTKQPKLFEYYLGLRFKRAAQDQLALGQWRPILHVSGM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
F ++H+ I L+ P HP NKN +IT +L P+K L +++R L + + P
Sbjct: 230 FGARHANIGLVVPAIQHPTNKNEIITIDLSQSPEKLLDYSADELRQRLYTPADQLDGERP 289
Query: 182 -ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCAS-----------SILNNT 229
+ IH+NR+P V + K+++ + R DL +N+K ++L +
Sbjct: 290 ALKSIHINRAPFV-APAKMMTDEVAARANLDLVALRENMKALQALMKERGNELLALLRDV 348
Query: 230 YIWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKK 289
Y K++ +D E + LY F+S D ++S SP+ L+ +F FE+++
Sbjct: 349 YAHKRV-----AEPTDPEWD----LYGGFLSDGDRRLCDQIKSASPQILARSSFPFEDRR 399
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH 349
L EL+F YRARNF +TLS E +W++Y R + L ++ + EI +++++ ++
Sbjct: 400 LGELLFRYRARNFPDTLSLDEKMQWQEYCFERITREDQGLMHMERLFEEI-AVIRQVSDD 458
Query: 350 DTK---ILNALLMYGKSI 364
D + +++AL Y ++
Sbjct: 459 DPRAMQLMDALESYSDTL 476
>gi|227357738|ref|ZP_03842087.1| exodeoxyribonuclease I [Proteus mirabilis ATCC 29906]
gi|227162067|gb|EEI47081.1| exodeoxyribonuclease I [Proteus mirabilis ATCC 29906]
Length = 476
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 196/369 (53%), Gaps = 11/369 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSF+LE L+ N
Sbjct: 114 ILYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGINWPENDDGFPSFRLELLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+ ++ PR+F++ +LR K+ V A I P P +++
Sbjct: 174 ISHENAHDAMSDVYATIAMAKKLKQAQPRMFDYFFNLRDKRKVQALIDIPTMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S +SL+ P+ HP N+N +I +L D L ++R+ L ++ D
Sbjct: 234 MFGAARSNLSLVAPLAWHPDNRNAVIVCDLAADISPLLTLTSEQLRERLYTPRSELSADE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ PIV L S R D++ N + +L+N I K+
Sbjct: 294 PPVPIKLLHINKCPIVAPK-NTLRSQDADRIGLDIDNCLNN---QAILLSNPEIRNKVVE 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ ++D +LYN F S D + I+RS P+ L +N FE+ ++E L F
Sbjct: 350 IFAQQTPFTPADDVDAQLYNGFFSDNDRSAMEIIRSTQPQNLPALNLTFEDPRMEPLFFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
YRARNF TL+Y E +RW +R + +K Y IN L E NE K L
Sbjct: 410 YRARNFPATLTYDEQQRWLAHRKEQLTPEKLTEY-INTIQLLAEE--HSDNEEKLKQLQE 466
Query: 357 LLMYGKSIT 365
L +Y + I
Sbjct: 467 LYLYAQEIA 475
>gi|197284734|ref|YP_002150606.1| exonuclease I [Proteus mirabilis HI4320]
gi|425067711|ref|ZP_18470827.1| hypothetical protein HMPREF1311_00867 [Proteus mirabilis WGLW6]
gi|194682221|emb|CAR41929.1| exodeoxyribonuclease I [Proteus mirabilis HI4320]
gi|404600911|gb|EKB01336.1| hypothetical protein HMPREF1311_00867 [Proteus mirabilis WGLW6]
Length = 476
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 196/369 (53%), Gaps = 11/369 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSF+LE L+ N
Sbjct: 114 ILYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGINWPENDDGFPSFRLELLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+ ++ PR+F++ +LR K+ V A I P P +++
Sbjct: 174 ISHENAHDAMSDVYATIAMAKKLKQAQPRMFDYFFNLRDKRKVQALIDIPTMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S +SL+ P+ HP N+N +I +L D L ++R+ L ++ D
Sbjct: 234 MFGAARSNLSLVAPLAWHPDNRNAVIVCDLAADISPLLTLTSEQLRERLYTPRSELSADE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ PIV L S R D++ N + +L+N I K+
Sbjct: 294 PPVPIKLLHINKCPIVAPK-NTLRSQDADRIGLDIDNCLNN---QAILLSNPEIRNKVVE 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ ++D +LYN F S D + I+RS P+ L +N FE+ ++E L F
Sbjct: 350 IFAQQTPFTPADDVDAQLYNGFFSDNDRSAMEIIRSTQPQNLPALNLTFEDPRMEPLFFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
YRARNF TL+Y E +RW +R + +K Y IN L E NE K L
Sbjct: 410 YRARNFPATLTYDEQQRWLAHRKEQLTPEKLTEY-INTIQLLAEE--HSDNEEKLKQLQE 466
Query: 357 LLMYGKSIT 365
L +Y + I
Sbjct: 467 LYLYAQEIA 475
>gi|66047247|ref|YP_237088.1| exonuclease I [Pseudomonas syringae pv. syringae B728a]
gi|63257954|gb|AAY39050.1| Exodeoxyribonuclease I subunit C [Pseudomonas syringae pv. syringae
B728a]
Length = 476
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 199/345 (57%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHAPLLHEDAEILKRRLYTRHDALSDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + N +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSENREVWHGKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 IYGKDDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK----NNLYNINMFYLE 338
RARNF +TLS +E RW+ + R N + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRNPEWGAPNTLHDFTAAWVE 447
>gi|410087395|ref|ZP_11284099.1| Exodeoxyribonuclease I [Morganella morganii SC01]
gi|409766130|gb|EKN50226.1| Exodeoxyribonuclease I [Morganella morganii SC01]
Length = 472
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 17/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W N SRWDLI++ +A Y L P G WP + G PSFKLEHL+ N
Sbjct: 110 IFYRNFYDPYAYSWMNRNSRWDLIDITRACYALRPDGTNWPENDEGLPSFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DV AT+ +A+ +R PRLF++ +LR K+ + A I P +P +I+
Sbjct: 170 IAHENAHDAMADVYATIAMAKQLRGAQPRLFDYFFTLRDKRKLAALIDIPSMKPLVHISG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + SL+ P+ HP N+N +I +L D L D + +R++L +++ ED
Sbjct: 230 MFGAVRANTSLVAPLAWHPDNRNAVIMCDLAGDLTPLLTLDADTLREHLYTRRDELPEDA 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ L R D + +N A + + I +K+
Sbjct: 290 SPVPLKLVHINKCPILAPE-NTLRPQDAQRIGLDKDLCARN---AELLHQHPEIREKVVA 345
Query: 238 DY-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + ++D +Y F S D + I+R PK L + +++ +L EL+F
Sbjct: 346 VFAQPREFPPQNDVDRMIYQGFFSDSDKAAMTIIRETDPKNLPALTLSYQDARLPELLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD---TKI 353
YRARNF TL E +RW +R F N N+ ++ +I ++++ +HD T++
Sbjct: 406 YRARNFPGTLDEHEQQRWLAHRREVF-----NQDNLTRYFEQIGEMMQE-YQHDANKTEL 459
Query: 354 LNALLMYGKSITQ 366
L L+ Y + + Q
Sbjct: 460 LKKLVQYAQHLAQ 472
>gi|425072940|ref|ZP_18476046.1| hypothetical protein HMPREF1310_02379 [Proteus mirabilis WGLW4]
gi|404596714|gb|EKA97234.1| hypothetical protein HMPREF1310_02379 [Proteus mirabilis WGLW4]
Length = 476
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 196/369 (53%), Gaps = 11/369 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSF+LE L+ N
Sbjct: 114 ILYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGINWPENDDGFPSFRLELLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+ ++ PR+F++ +LR K+ V A I P P +++
Sbjct: 174 ISHENAHDAMSDVYATIAMAKKLKQAQPRMFDYFFNLRDKRKVQALIDIPTMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S +SL+ P+ HP N+N +I +L D L ++R+ L ++ D
Sbjct: 234 MFGAARSNLSLIAPLAWHPDNRNAVIVCDLAADISPLLTLTSEQLRERLYTPRSELSADE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ PIV L S R D++ N + +L+N I K+
Sbjct: 294 PPVPIKLLHINKCPIVAPK-NTLRSQDADRIGLDIDNCLNN---QAILLSNPEIRNKVVE 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ ++D +LYN F S D + I+RS P+ L +N FE+ ++E L F
Sbjct: 350 IFAQQTPFTPADDVDAQLYNGFFSDNDRSAMEIIRSTQPQNLPALNLTFEDPRMEPLFFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
YRARNF TL+Y E +RW +R + +K Y IN L E NE K L
Sbjct: 410 YRARNFPATLTYDEQQRWLAHRKEQLTPEKLTEY-INTIQLLAEE--HSDNEEKLKQLQE 466
Query: 357 LLMYGKSIT 365
L +Y + I
Sbjct: 467 LYLYAQEIA 475
>gi|212557300|gb|ACJ29754.1| Exodeoxyribonuclease I [Shewanella piezotolerans WP3]
Length = 470
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 208/371 (56%), Gaps = 22/371 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLE L+ N L
Sbjct: 114 FYRNFFDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWPQKEDGSPSFKLEQLTVANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+G+A+LI++ P+LF++ SLRKK+ V I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIGMAKLIKSVQPKLFDYYFSLRKKQEVSKLIDVLAMKPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S+ + +L+ P+ H NKN +I NL D + +IR+ + ++ ED +
Sbjct: 234 ISALNGCTTLIAPLAYHSTNKNAVICVNLAMDVTPLIELTAEQIRERMYTRREDLAEDEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKKI 235
PI + IH+N+SP ++ K L+ + R D A +K ++ I +
Sbjct: 294 PIGLKQIHINKSPF-LAGAKTLTDDNAARLDIDKAFAREQYKKLRLHPEIREKLVAVFDL 352
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
D +I + DL+L F S+ D K+ ++R+ P L+ + F++++L E++F
Sbjct: 353 QSDREIADPDLQL-----YSGGFFSQADKAKMEMIRNTKPMNLAALELTFDDERLPEMLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
YRARN+ ETL+ EL RW+++ R N + + +E+++++ NE K+
Sbjct: 408 RYRARNYPETLNDSELLRWREFCQPRL--------NDPDYMIRLENIIEETEQNESKQKL 459
Query: 354 LNALLMYGKSI 364
L AL Y +SI
Sbjct: 460 LQALCHYLRSI 470
>gi|422675821|ref|ZP_16735161.1| exonuclease I [Pseudomonas syringae pv. aceris str. M302273]
gi|330973535|gb|EGH73601.1| exonuclease I [Pseudomonas syringae pv. aceris str. M302273]
Length = 476
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 199/345 (57%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHAPLLHEDAEILKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + N +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSENREVWHGKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 IYGKDDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK----NNLYNINMFYLE 338
RARNF +TLS +E RW+ + R N + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRNPEWGAPNTLHDFTAAWVE 447
>gi|424073580|ref|ZP_17810996.1| exodeoxyribonuclease I [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407995874|gb|EKG36380.1| exodeoxyribonuclease I [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 476
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 195/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARHYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEDAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDMTGYQAR---ATQLSERREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK----NNLYNINMFYLE 338
RARNF +TLS +E RW+ + R N + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRNPEWGAPNTLHDFTAAWVE 447
>gi|421504980|ref|ZP_15951920.1| exonuclease I [Pseudomonas mendocina DLHK]
gi|400344203|gb|EJO92573.1| exonuclease I [Pseudomonas mendocina DLHK]
Length = 481
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 203/371 (54%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWP-QEEGRVSLKLERLTQANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+GLARL+R PRL++F+ LR K+ V+ +I + +P +++
Sbjct: 169 DHGQAHDALSDVRATIGLARLLRERQPRLYDFLYQLRSKQRVMDQIR--LLQPLLHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
FS+ Y++ + P+ HP N+N LI +L DP L D + +R L ++ E
Sbjct: 227 FSAARHYLAPVLPLAWHPRNRNALIVCDLQADPAPLLELDADTLRARLYTRREDLAEHEA 286
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R + D + +N A + +W+ K+
Sbjct: 287 PVPLKLLHINRCP-VVAPLSVLRDADRQRLQLDWSVCERN---AERLKAAQTLWQDKLSA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + +++LY FI +D +R+ P+ L++ N+ F++ +L EL+F Y
Sbjct: 343 IYREEAFAASADPEQQLYEGFIGDRDRRLCEQVRNAQPQALASQNWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ++LS E +RW ++ R + + N + F ++ L ++L
Sbjct: 403 RARNFPDSLSPTEQQRWMEFCRLRLNDAQYGAPNTLAQFRAALDELAGSCTPSQLQLLQQ 462
Query: 357 LLMYGKSITQK 367
+ +++ Q+
Sbjct: 463 WQAHARTLQQR 473
>gi|120599334|ref|YP_963908.1| exonuclease I [Shewanella sp. W3-18-1]
gi|120559427|gb|ABM25354.1| Exodeoxyribonuclease I subunit C [Shewanella sp. W3-18-1]
Length = 472
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 206/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K++G PSFKLEHL+ N L
Sbjct: 116 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWPLKDDGSPSFKLEHLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+++ LR+K+ V +I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIREKQPKLYHYYFELRRKQAVSDQIDVLNMQPLAHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D +I +I+ + + ED
Sbjct: 236 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLSPLFDLNIEQIKTRMYTARAELAEDEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+ P + S K+L R D A + K + N+ + +K+
Sbjct: 296 PIPVKQIHLNKCPFITS-AKILDDAQASRLNIDKAFAREQYK---RLRNHPELREKLAQL 351
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + ++ D LY F S D K+ I+R P+ L+ + F++ ++ E++F Y
Sbjct: 352 FEHDGESTTVDPDLMLYSGGFFSSADKAKMEIIRHTLPQNLAALELQFDDVRMPEMLFRY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
RARN+ E L +E RW+++ +R ++ + L++E+LL+ +E+ K+L
Sbjct: 412 RARNYPELLDDQESHRWREFCQNRLADQD--------YLLKLENLLQNTVDDENKQKLLA 463
Query: 356 ALLMY 360
AL Y
Sbjct: 464 ALCHY 468
>gi|307130832|ref|YP_003882848.1| exonuclease I [Dickeya dadantii 3937]
gi|306528361|gb|ADM98291.1| exonuclease I [Dickeya dadantii 3937]
Length = 476
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 199/369 (53%), Gaps = 13/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAYSWQNGNSRWDLLDMLRACYALRPDGIVWPENDDGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +ARL++ + P+LF+++ +LR K V A I P +P +++
Sbjct: 174 VEHTQAHDAMSDVYATIAMARLLKQSQPKLFDYLYALRNKNKVSALIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D + L D +++R L ++ ED
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNAVIVCDLAGDIQPLLELDADELRTRLYTRRALLAEDE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P V++ L R D N++ + + K + L
Sbjct: 294 SPVPIKLVHINKCP-VLAPASTLRPEDAERLGIDRQRCLNNLQLLRQ--HGSVREKVVAL 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++D +LY+ F S D + I+R + L +N F ++++EEL+F Y
Sbjct: 351 FADAPPFEVSTDVDLQLYDGFFSDADRAAMDIIRKTDSQHLPALNLQFADRRVEELLFRY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TL +E +RW +R + F + Y +N Y + +E T +L
Sbjct: 411 RARNFPGTLDEQEQQRWLAHRRAVFTTDRVQDYFDALNQLYQQ-----HDGDEKKTALLK 465
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 466 ALFAYAQQL 474
>gi|424069200|ref|ZP_17806648.1| exodeoxyribonuclease I [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|407995265|gb|EKG35800.1| exodeoxyribonuclease I [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 476
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 196/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++F+ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDFLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARHYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEDAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSERREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFAASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK----NNLYNINMFYLE 338
RARNF +TLS +E RW+ + R N + N L + ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRNPEWGAPNTLQDFTAAWVE 447
>gi|146292669|ref|YP_001183093.1| exonuclease I [Shewanella putrefaciens CN-32]
gi|145564359|gb|ABP75294.1| Exodeoxyribonuclease I subunit C [Shewanella putrefaciens CN-32]
Length = 470
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 206/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K++G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWPLKDDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+++ LR+K+ V +I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIREKQPKLYHYYFELRRKQAVSDQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D +I +I+ + + ED
Sbjct: 234 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLSPLFDLNIEQIKTRMYTARAELAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+ P + S K+L R D A + K + N+ + +K+
Sbjct: 294 PIPVKQIHLNKCPFITS-AKILDDAQASRLNIDKAFAREQYK---RLRNHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + ++ D LY F S D K+ I+R P+ L+ + F++ ++ E++F Y
Sbjct: 350 FEHDGESTTVDPDLMLYSGGFFSSADKAKMEIIRHTLPQNLAALELQFDDVRMPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
RARN+ E L +E RW+++ +R ++ + L++E+LL+ +E+ K+L
Sbjct: 410 RARNYPELLDDQESHRWREFCQNRLADQD--------YLLKLENLLQNTVDDENKQKLLA 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|398909586|ref|ZP_10654627.1| exonuclease I [Pseudomonas sp. GM49]
gi|398187822|gb|EJM75149.1| exonuclease I [Pseudomonas sp. GM49]
Length = 476
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 204/373 (54%), Gaps = 13/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGMVWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ + D +R L +++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLIDLDAESLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IW-KKIF 236
+P+ +IH+N+ P V++ L VL R D+ + + LN+ +W KI
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRQEDQQRLGLDMTLYQQRVL----RLNDAQKVWLDKIL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFSPSQDPEQQLYDGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILN 355
YRARNF +TL+ +E +RW+ + R N ++E + L A +L+
Sbjct: 402 YRARNFPDTLNPEEQERWRIFCQKRLSEPGWGAPNTLESFVEAAAQLSVSATPFQQGVLS 461
Query: 356 ALLMYGKSITQKI 368
Y + + Q++
Sbjct: 462 EWQDYVQGLRQRL 474
>gi|426411224|ref|YP_007031323.1| exonuclease I [Pseudomonas sp. UW4]
gi|426269441|gb|AFY21518.1| exonuclease I [Pseudomonas sp. UW4]
Length = 476
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 195/347 (56%), Gaps = 12/347 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLQWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L+ ++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYAWLFQLRSKQKVMDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L + + E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAESLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IW-KKIF 236
+P+ +IH+N+ P V++ L VL + R D+ + + LN+T +W K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRQDDQQRLGLDMALYQQRVL----QLNDTRKVWLDKVL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFSQSQDPEQQLYDGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL 343
YRARNF +TL+ +E +RW+ + R + N ++E + L
Sbjct: 402 YRARNFPDTLNAEEQERWRIFCQKRLSDPGWGAPNTLESFVEAAAQL 448
>gi|293395284|ref|ZP_06639569.1| exodeoxyribonuclease I [Serratia odorifera DSM 4582]
gi|291422241|gb|EFE95485.1| exodeoxyribonuclease I [Serratia odorifera DSM 4582]
Length = 453
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 206/375 (54%), Gaps = 23/375 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R+ +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 91 IFYRSFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGIVWPENDDGFPSFRLEHLTRANG 150
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L+R PRLF+++L R K + A + P +++
Sbjct: 151 VAHEQAHDAMSDVHATIAMAKLVRQAQPRLFDYLLQHRNKHKLNALVDIAEMTPLVHVSG 210
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP NKN LI +L D L D +++R+ L +++ D
Sbjct: 211 MFGAARSNTSWVAPLAWHPDNKNALIVCDLAGDMTPLLELDADQLRERLYTRRDRLSADR 270
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L N R D N++ + + + +K+
Sbjct: 271 PPVPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQACLNNLQI---LRQHPQVREKVVA 326
Query: 238 DYKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
Y +D E ++D LY+ F S D + I++ P+ L ++ F + +++E
Sbjct: 327 LY----ADAEPFAASDDVDARLYDGFFSDADKAAMKIIQQTKPQNLPALDLTFNDDRMQE 382
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHD 350
L+F +RARN+ TL E +RW ++R + +K + + L++E+L L +A+
Sbjct: 383 LLFRFRARNYPNTLDDGEQRRWLQHRQTALSAEK-----VQSYVLQLEALYNLHEADSAK 437
Query: 351 TKILNALLMYGKSIT 365
+L +L YGK +
Sbjct: 438 LALLKSLFDYGKQLV 452
>gi|271500784|ref|YP_003333809.1| exodeoxyribonuclease I [Dickeya dadantii Ech586]
gi|270344339|gb|ACZ77104.1| Exodeoxyribonuclease I [Dickeya dadantii Ech586]
Length = 476
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 202/370 (54%), Gaps = 15/370 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL+++++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 LFYRNFFDPYAYSWQQGNSRWDLLDMLRACYALRPDGIVWPENDDGFPSFKLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +ARL++ P+LF+++ +LR K V A I P +P +++
Sbjct: 174 VEHTQAHDAMSDVYATIAMARLLKQAQPKLFDYLYALRNKNKVSALIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D + L D +++R L ++ ED
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNAVIVCDLAGDIQPLLALDADELRTRLYTRRELLAEDE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P V++ L R D N++ + N+ + +K+
Sbjct: 294 SPVPIKLVHINKCP-VLAPASTLRPEDAERLGIDRQHCLNNLQL---LRQNSSVREKVVA 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + ++D +LY+ F S D +AI+R + L +N F ++++EEL+F
Sbjct: 350 LFADAPPFEAAKDVDLQLYDGFFSDADRAAMAIIRKTDAQHLPALNLQFADRRVEELLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKIL 354
YRARNF TL +E +RW +R F ++ + ++ ++ L ++ +E T L
Sbjct: 410 YRARNFPGTLDEQEQQRWLAHRREVFTAER-----LQNYFDTLDQLYQQHDGDEKKTTQL 464
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 465 KALFAYAQQL 474
>gi|423093831|ref|ZP_17081627.1| exodeoxyribonuclease I [Pseudomonas fluorescens Q2-87]
gi|397887274|gb|EJL03757.1| exodeoxyribonuclease I [Pseudomonas fluorescens Q2-87]
Length = 478
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 199/354 (56%), Gaps = 15/354 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++A Y L P GI WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDLVRAAYALRPQGIVWP-QEEGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIRQKQPRLYDWLFQLRSKQKVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ +YI ++ P+ HP N+N LI +L DP+ L +D + +R L ++++ E
Sbjct: 226 FSAERNYIGVVLPLAWHPKNRNALIVCDLHLDPQGLLDHDADHLRQRLYTRRDALLEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P VI+ L VL + R + D+ + A + + +W+ K+
Sbjct: 286 PVPLKLIHINKCP-VIAPLTVLRAEDQERLQLDMEGYRER---ALRLTDAQKVWQDKLEA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY F+ +D +R P +L+ + F++++L EL+F Y
Sbjct: 342 IYGHEDFTASEDPEQQLYAGFMGDRDRRLCEQVRLADPAQLARERWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEIESLLKKAN 347
RARNF +TLS +E RW+ + R + N L + + E L A
Sbjct: 402 RARNFADTLSPEEQARWRVFCQQRLTAPQWGAPNTLQSFDEAMAEWTVLATPAQ 455
>gi|422644331|ref|ZP_16707469.1| exonuclease I [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330957883|gb|EGH58143.1| exonuclease I [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 476
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 192/330 (58%), Gaps = 13/330 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ +LR K+ V +I + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPRLYDYLFALRSKQKVQDQIR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D + ++ L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLDQDASTLKQRLYTRHEALSEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNT-YIWK-KIF 236
+P+ ++H+NR P VI+ + VL S R + D+ + ++ LN + +W+ K+
Sbjct: 287 PVPLKLLHINRCP-VIAPMGVLRSEDQERLQLDM----AGYESRAAALNESREVWQDKVL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI+ +D +R P++L+ + F++ +L EL+F
Sbjct: 342 ALYGKEDFTASEDPEQQLYDGFIADRDRRLCEQVRLADPERLAGDAWPFDDTRLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK 326
YRARNF TLS +E +RW+ + R N +
Sbjct: 402 YRARNFPHTLSREEQQRWQHFCQERLRNPE 431
>gi|423693330|ref|ZP_17667850.1| exodeoxyribonuclease I [Pseudomonas fluorescens SS101]
gi|388001892|gb|EIK63221.1| exodeoxyribonuclease I [Pseudomonas fluorescens SS101]
Length = 475
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 202/372 (54%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVMRTAYALRPEGINWP-EQEGRVTLKLERLTEANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R+ P+L+ ++ LR K+ V+ E+ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVRDKQPKLYEWLFQLRSKQRVMDEVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDAATLRQRLYTRRDELAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ LKVL + R + D A + + +W+ K+
Sbjct: 286 PVPLKLLHINRCP-VVAPLKVLRPQDLERLQLDKEACLAR---ALRLTDAQEVWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAEEDFAPNADPEQQLYDGFIGDRDRRLCEQVRMAEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEI-ESLLKKANEHDTKILNA 356
RARNF ETL+ +E RWK + R + + N + + + E L A ++L
Sbjct: 402 RARNFPETLNNEEQHRWKLFCQQRLSDAQWGAPNTLLGFKQAREELAVSATSFQCQVLAQ 461
Query: 357 LLMYGKSITQKI 368
Y S+ ++
Sbjct: 462 WQDYVDSLAARL 473
>gi|398955957|ref|ZP_10676704.1| exonuclease I [Pseudomonas sp. GM33]
gi|398150423|gb|EJM39016.1| exonuclease I [Pseudomonas sp. GM33]
Length = 476
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 13/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLQWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L+ ++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYAWLFQLRSKQKVMDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L + + E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAESLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IW-KKIF 236
+P+ +IH+N+ P V++ L VL R D+ + + LN+ +W K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRQEDQQRLGLDMALYQQRVL----RLNDARKVWLDKVL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFSQSQDPEQQLYDGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILN 355
YRARNF +TL+ +E +RW+ + R + N ++E + L A+ +L
Sbjct: 402 YRARNFPDTLNAEEQERWRIFCQKRLSDPGWGAPNTLESFVEAAAQLSVSASAFQQGVLG 461
Query: 356 ALLMYGKSITQKI 368
Y + + Q++
Sbjct: 462 EWQDYVQGLRQRL 474
>gi|383816606|ref|ZP_09972000.1| exonuclease I [Serratia sp. M24T3]
gi|383294508|gb|EIC82848.1| exonuclease I [Serratia sp. M24T3]
Length = 476
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 203/371 (54%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPDGINWPENDEGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF ++L R K + A I P P +++
Sbjct: 174 VEHENAHDAMSDVYATIAMAKLVKQAQPRLFEYLLEHRSKHKINALIDIPTMAPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
MF + S + P+ HP NKN +I +L D L D +++R+ L ++ +
Sbjct: 234 MFGAARGNTSWVAPMAWHPENKNAVIVCDLAGDMAPLLELDSDQMRERLYSRREDLLPGQ 293
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+PI ++H+N+ P++ +L N + R D +N++ + N+ + +K+
Sbjct: 294 SPLPIKLLHINKCPVLAPAKTLLPENAL-RLDIDRERCLQNLQL---LRQNSQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D +LYN F D + I++ +P+ L ++ F++ +LEEL+F
Sbjct: 350 LFAEAEPYTPSEDVDAQLYNGFFGDADRATMRIIQQTAPENLPALDLKFQDSRLEELLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKIL 354
+RARN+ TL+ E +RW +R +K + + L++E+L L + + T +L
Sbjct: 410 FRARNYPLTLTDAEQRRWLTHRQEALSPEK-----VQDYVLQLEALYNLHEEDAEKTALL 464
Query: 355 NALLMYGKSIT 365
AL YGK +
Sbjct: 465 KALFDYGKKLV 475
>gi|419953297|ref|ZP_14469442.1| exonuclease I [Pseudomonas stutzeri TS44]
gi|387969889|gb|EIK54169.1| exonuclease I [Pseudomonas stutzeri TS44]
Length = 478
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 202/359 (56%), Gaps = 12/359 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + NG+ + KL+ L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWP-QENGRVTLKLDRLTVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R+ PRL++++ LR+K+ VL +I + +P +++
Sbjct: 169 EHLHAHDALSDVRATIALARLLRDRQPRLYDYLYQLRRKQAVLDQI--ELLKPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y++++ P+ HP+N+N LI +L +P +R+ L +++
Sbjct: 227 FSAERHYLAVVLPLAWHPLNRNALIVCDLQAEPGVLCDESAQTLRERLYTRRDELAAGAL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P V++ L VL + R + D + ++ A + W K+
Sbjct: 287 PVPLKLVHVNRCP-VLAPLSVLREGDLTRLQLD---RAQCLQRARWLCETRETWLPKLAQ 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + L+ +++LY+ F+ ++D +RS+S + + N+ F++ +L EL+F Y
Sbjct: 343 IYQQEAFEECLDPEQQLYDGFLGERDRRLCEQVRSLSASECAARNWTFDDPRLAELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
RARNF ETLS E ++WK + R + + N + F + + A +++L
Sbjct: 403 RARNFPETLSTAEREQWKSFCRQRLIDAQYGAPNTLQQFDEGVRQSVATATAAQSEVLE 461
>gi|152988725|ref|YP_001350220.1| exonuclease I [Pseudomonas aeruginosa PA7]
gi|452881037|ref|ZP_21957903.1| exonuclease I [Pseudomonas aeruginosa VRFPA01]
gi|150963883|gb|ABR85908.1| exodeoxyribonuclease I [Pseudomonas aeruginosa PA7]
gi|452182642|gb|EME09660.1| exonuclease I [Pseudomonas aeruginosa VRFPA01]
Length = 478
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 202/371 (54%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-EADGRVSLKLELLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL +I + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHRVLDQIH--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L ++R L +++ E
Sbjct: 227 FSAERHFLSVVLPLAWHPRNRNALIVCDLRADPAPLLELSAEELRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ I +NR P V++ L VL + R D+ + A + W +K+ L
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRLRTGIDVEACQRR---AELLRQRQAAWTEKLAL 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D LR P++L+ + F++ +L+EL F Y
Sbjct: 343 AYSEESFAASEDPEQQLYDGFIGDRDRRLCEQLRRAEPEQLAREQWPFDDIRLQELFFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETLS E ++W+ + +R +++ N + F +E+ ++ +L A
Sbjct: 403 RARNFPETLSPSERQQWEAFCRNRLSHEEFGAPNTLPAFEAAMEACRQEQGGTLPAVLAA 462
Query: 357 LLMYGKSITQK 367
Y + ++
Sbjct: 463 WRDYAGELRRR 473
>gi|146281544|ref|YP_001171697.1| exonuclease I [Pseudomonas stutzeri A1501]
gi|145569749|gb|ABP78855.1| exodeoxyribonuclease I [Pseudomonas stutzeri A1501]
Length = 477
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 207/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP +++G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIGWP-EDDGRVTLKLERLSAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARLIR PRL+ ++ +LR+K VL ++ + P +++
Sbjct: 169 EHLNAHDALSDVRATISLARLIRERQPRLYEYLFNLRRKHAVLEQVT--LLEPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L + + L +R L +++ E
Sbjct: 227 FSAARHFLSVVLPLAWHPRNRNALIVCDLQAEVRPLWLESAETLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK----K 234
+P+ ++H+N+ P V++ LKVL + R + DL + A ++ ++W +
Sbjct: 287 PVPLKLVHINKCP-VLAPLKVLREADIQRLELDLPACHER---ADALREQRHVWSPKLDE 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ + D + +++LY+ F+ ++D +R M+P +L+ F++ +LEEL+
Sbjct: 343 VYREEGFIGVD---DPEQQLYDGFLGERDRRLCDRIREMAPAELARQQCHFDDVRLEELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF E LS E RW+++ R + N + F +I+ + A ++
Sbjct: 400 FRYRARNFPEALSAVERVRWQRFCQQRLSGEIAGAPNTLAQFEADIQQFMLTAAPAQQQL 459
Query: 354 LNALLMYGKSITQK 367
L YG+++ ++
Sbjct: 460 LQQWREYGRALGER 473
>gi|127512540|ref|YP_001093737.1| exonuclease I [Shewanella loihica PV-4]
gi|126637835|gb|ABO23478.1| Exodeoxyribonuclease I subunit C [Shewanella loihica PV-4]
Length = 482
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 204/365 (55%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+N SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ NNL
Sbjct: 126 FYRNFFDPYAREWQNGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTQANNL 185
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH KAHDA+SDV AT+ +A+LI+ P+LF++ +LRKK V +I +P +++
Sbjct: 186 SHDKAHDAMSDVYATIAMAKLIKERQPKLFDYYFNLRKKNEVSKQIDVLNMQPLIHVSSK 245
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S+ H +L+ P+ H NKN +I NL D + ++IR+ + + D +
Sbjct: 246 ISALHGCTTLIAPVAHHSTNKNAIICVNLAMDVTPLIELSADEIRERMYTPRVDLASDEL 305
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI + +H+N+ P I+ K L+ R + D A K + + I +K+
Sbjct: 306 PIGLKQLHINKCPF-IATAKTLTDGNAQRLEIDKEFARAQYK---RLRQHPEIREKLVAV 361
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + + D +LY F S D K+ I+R +P+ L+ + F++++L E++F Y
Sbjct: 362 FDTEHGNEISDPDLQLYSGGFFSHADKSKMEIIRHTAPQHLAALELDFDDERLPEMLFRY 421
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILN 355
RARN+ ETL E +RW+ + SR N + +++E+L+ +A+E K+L
Sbjct: 422 RARNYPETLDDTEQQRWRTFCQSRL--------NDPDYMIKLETLVNDTEADEEKQKLLT 473
Query: 356 ALLMY 360
AL Y
Sbjct: 474 ALCHY 478
>gi|117921013|ref|YP_870205.1| exonuclease I [Shewanella sp. ANA-3]
gi|117613345|gb|ABK48799.1| Exodeoxyribonuclease I subunit C [Shewanella sp. ANA-3]
Length = 470
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 203/369 (55%), Gaps = 18/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N +RWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNTRWDIIDLVRACYAFRPDGIHWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+ + LR+K+ V A+I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKEKQPKLYQYYFELRRKQAVSAQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ +L+ P+ HP NKN +I NL D D+ +I+ + + D
Sbjct: 234 ISALQGCTTLIAPVAHHPSNKNAIICVNLAMDLSPLFELDVEQIKTRMYTPRAELAADEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ P + S K+L R D A + K + + + +K+
Sbjct: 294 PIPVKQVHLNKCPFITS-AKILDDAQAERLNIDKAFAREQYK---RLKAHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + D LY F S D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 350 FEHEGEVTTTDPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALDLQFDDGRIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L+ +E +RW+ + R ++ + L++E+LL+ + +EH K+L
Sbjct: 410 RARNYPELLNDQEAQRWRTFCQQRLSDQD--------YLLKLENLLQDTEGDEHKQKLLA 461
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 462 ALCHYLRGL 470
>gi|300723649|ref|YP_003712954.1| exonuclease I [Xenorhabdus nematophila ATCC 19061]
gi|297630171|emb|CBJ90808.1| exonuclease I, 3'-> 5'-specific; deoxyribophosphodiesterase
[Xenorhabdus nematophila ATCC 19061]
Length = 476
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 16/370 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF++ LR K+ ++ +I P +P +++
Sbjct: 174 IEHTHAHDAMSDVYATIAMAKLVKKAQPRLFDYFFQLRNKQKIINQIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S ISL+ P+ HP N+N +I +L D L +++++R L +++ + +
Sbjct: 234 MFGALRSNISLIAPLAWHPTNRNAVIMCDLAGDISPLLEPNVDELRKRLYTRRDELQPNQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ PI I+ L R + D N N+ + + N+ I +++
Sbjct: 294 SPVPIKLVHINKCPI-IAPENTLRPEDAERVELDRNQCEYNL---AILRNHPQIRERVV- 348
Query: 238 DYKINNSDLEL----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ +S E N+D +LY+ F D + I+R +P+ L ++ F++++++ L
Sbjct: 349 --ELFSSPEEFPESDNVDAKLYSGFFGDADKTAMEIIRKTAPQNLPALDLTFQDERIKAL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDT 351
+F YRARN+ TL Y E +RW ++R + + Y I ++E +S +K + T
Sbjct: 407 LFRYRARNYPATLDYDEQQRWLRHRQDILTQESISQYLATIEALFVEYQSDEEKCRQLKT 466
Query: 352 KILNALLMYG 361
+ A+ + G
Sbjct: 467 LVEYAVQLAG 476
>gi|94500901|ref|ZP_01307427.1| exodeoxyribonuclease I [Bermanella marisrubri]
gi|94427020|gb|EAT12002.1| exodeoxyribonuclease I [Oceanobacter sp. RED65]
Length = 478
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 201/371 (54%), Gaps = 15/371 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY+REW+N SRWD++++++ Y L P GI WP +GK SFKLE+LS N +
Sbjct: 112 LYRNFFDPYQREWQNGNSRWDILDMMRCAYSLRPDGIEWPKGEDGKVSFKLENLSAANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDV AT+GLA+L++ P+L+ ++ LR+K+ V + RP +I+ M
Sbjct: 172 IHENAHDALSDVYATIGLAKLVKEKQPKLYQYLFELRRKEAVAPLLDVVNKRPVLHISGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK---- 177
F + ++M P+ + P NKN +I ++L+ DP +I+ L K +
Sbjct: 232 FPVEKGCAAVMVPLAMEPKNKNAIICFDLMSDPTPLFELTAEQIQARLYTPKAELEAQGI 291
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
E +P+ IH+N+ P+V+ K++ + ++ + N+ + I N + +K+
Sbjct: 292 ERLPLKSIHINKCPVVLP-AKMVQPEIAKKWGLSGDQIRSNL---AKIKNGPDLTEKL-- 345
Query: 238 DYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ + D E + D + F D + +R P+ L ++N F++++LEE++
Sbjct: 346 -QNVMSRDFEAHSDPDAMIYSGGFFGPTDKQAMETIRQSHPEALDDLNISFQDRRLEEML 404
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTKI 353
F YRARN+ ETL+ E ++W+ +R R N Y N +F ++ + A E +
Sbjct: 405 FRYRARNYPETLTGDEFEQWETFRKQRLLGPTNGSYLNYELFAKALQEAAQTAPESQYPL 464
Query: 354 LNALLMYGKSI 364
L L MY +SI
Sbjct: 465 LQDLQMYAESI 475
>gi|114047972|ref|YP_738522.1| exonuclease I [Shewanella sp. MR-7]
gi|113889414|gb|ABI43465.1| Exodeoxyribonuclease I subunit C [Shewanella sp. MR-7]
Length = 470
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 205/369 (55%), Gaps = 18/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N +RWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNTRWDIIDLVRACYAFRPDGIHWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+ + LR+K+ V A+I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKEKQPKLYQYYFELRRKQAVSAQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ +L+ P+ HP NKN +I NL D D+ +I+ + + ED
Sbjct: 234 ISALQGCTTLIAPVAHHPSNKNAIICVNLAMDLSPLFELDVEQIKTRMYTPRAELAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ P + S K+L R D A + K + + + +K+
Sbjct: 294 PIPVKQVHLNKCPFITS-AKILDDAQAERLNIDKAFAREQYK---RLKAHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + D LY F S D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 350 FEHEGEVTTTDPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALDLQFDDGRIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L+ +E +RW+ + R ++ + L++E+LL+ +A+E+ K+L
Sbjct: 410 RARNYPELLNDQEAQRWRIFCQQRLSDQD--------YLLKLENLLQDTEADEYKQKLLA 461
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 462 ALCHYLRGL 470
>gi|378952541|ref|YP_005210029.1| Exodeoxyribonuclease I [Pseudomonas fluorescens F113]
gi|359762555|gb|AEV64634.1| Exodeoxyribonuclease I [Pseudomonas fluorescens F113]
Length = 478
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 189/318 (59%), Gaps = 11/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDLVRAAYALRPQGIVWP-QEDGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K+ V+ +I + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIRQQQPRLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +YI ++ P+ HP N+N LI +L DP+ L +D +R L ++ E
Sbjct: 226 FSAARNYIGVVLPLAWHPKNRNALIVCDLHLDPQGLLDDDAESLRQRLYTRREELLEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P VI+ L VL + + R + D+ F+ + A + + +W+ K+
Sbjct: 286 PVPLKLIHINKCP-VIAPLSVLRAEDLQRLELDME-GFQ--QRALRLTDAQKVWQDKLQA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY F+ +D +R P +L+ + F++++L EL+F Y
Sbjct: 342 IYGREDFTASEDPEQQLYAGFLGDRDRRLCEQVRLADPAQLAQERWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TL+ +E RW+
Sbjct: 402 RARNFPDTLNPEEQARWR 419
>gi|90416366|ref|ZP_01224298.1| exodeoxyribonuclease I [gamma proteobacterium HTCC2207]
gi|90332091|gb|EAS47305.1| exodeoxyribonuclease I [marine gamma proteobacterium HTCC2207]
Length = 478
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 207/371 (55%), Gaps = 10/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY+REWKN SRWD+I++++ L P GI WP G+PSF+LE L+ N L
Sbjct: 110 LYRNFYDPYQREWKNGNSRWDIIDMLRLCRALRPEGIEWPDHEPGRPSFRLEDLTAANGL 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDALSDV AT+ +A+L+++ PRLF++ L R KK V A + +PFF+I+ M
Sbjct: 170 AHEAAHDALSDVTATIAMAKLVKDKQPRLFDYALQNRGKKQVAAMLDLKARKPFFHISGM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + Y +LM P+ HP N N +I ++L DP+ + + ++IRD + E
Sbjct: 230 LAKEQLYGALMMPLAQHPTNSNGIICFDLSADPEALVSLNEHQIRDRVFTASADLPEGAE 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +IH+N++P+V ++ K++ + R DL +N + SS+ + K+ L
Sbjct: 290 RIPLKVIHINKAPVVTTH-KLVDTATAKRLDIDLERCERNWQRLSSM----DLSDKLQLV 344
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
++ + + +++LY F+ +D L +R + S F F +++ +L+F YR
Sbjct: 345 FREQKFPPKSDAEQQLYGGFLPNQDKGLLDDVRRATASDFSQQQFYFADQRYNQLLFSYR 404
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILNA 356
AR F E+LS +E + W + R ++++ + ++ LL ++H +L A
Sbjct: 405 ARYFPESLSAEEQQTWLESCRWRLTDEQSGYLTLQQNRRTLDQLLADTSLSDHKRGVLQA 464
Query: 357 LLMYGKSITQK 367
L + ++TQ+
Sbjct: 465 LESWSATVTQQ 475
>gi|407789424|ref|ZP_11136525.1| exonuclease I [Gallaecimonas xiamenensis 3-C-1]
gi|407206782|gb|EKE76732.1| exonuclease I [Gallaecimonas xiamenensis 3-C-1]
Length = 471
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 202/369 (54%), Gaps = 13/369 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDLI++++A Y L P GI WPY +G P FKLE LS N L
Sbjct: 110 LYRNFYDPYEREWQNGNSRWDLIDMVRATYALRPEGIEWPYYEDGSPCFKLEELSKANAL 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDV AT+GLA+LIR+ P+L+++ LR+K+ V A I +P + +
Sbjct: 170 VHARAHDALSDVEATIGLAKLIRDRQPKLYDYFFKLRRKQAVTALIDVINLQPLVHTSSR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + P+ HP+NKN +I +L D L D +R L + +E
Sbjct: 230 FPGLQGCSTYVVPLAWHPVNKNAVIVVDLNGDLAPLLDLDGQALRQRLYTRSADLEEGQS 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ PI ++ K L D N +N+ ++ + + K+
Sbjct: 290 RLPVKLVHLNKCPI-LAPAKTLGPERADELGIDRNRCRQNL---DTLKAHPELRDKLVEL 345
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRS-MSPKKLSNVNFCFENKKLEELIFLY 297
+ + E + +E LY FIS D +A++R+ P +L+ ++ F++ +L L+F Y
Sbjct: 346 FSDSGDFAEQDAEEALYGGFISDADKASMALVRANQDPNRLTQIH--FKDPRLNTLLFRY 403
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RAR F +TL+ KE RW++YR + + + + F LE+E L ++ +E IL
Sbjct: 404 RARYFAQTLTEKEQLRWRQYR-EEVLVQGSRGFGMQDFMLELEVLAEERADDEKAMAILK 462
Query: 356 ALLMYGKSI 364
L +Y +++
Sbjct: 463 QLYLYAQNL 471
>gi|113970745|ref|YP_734538.1| exonuclease I [Shewanella sp. MR-4]
gi|113885429|gb|ABI39481.1| Exodeoxyribonuclease I subunit C [Shewanella sp. MR-4]
Length = 470
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 205/369 (55%), Gaps = 18/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N +RWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNTRWDIIDLVRACYAFRPDGIHWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+ + LR+K+ V A+I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKEKQPKLYQYYFELRRKQAVSAQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ +L+ P+ HP NKN +I NL D D+ +I+ + + ED
Sbjct: 234 ISALQGCTTLIAPVTHHPSNKNAIICVNLAMDLSPLFELDVEQIKTRMYTPRAELAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ P + S K+L R D A + K + + + +K+
Sbjct: 294 PIPVKQVHLNKCPFITS-AKILDDAQAERLNIDKAFAREQYK---RLKAHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + D LY F S D K+ I+R P+ L+ ++ F++ ++ E++F Y
Sbjct: 350 FEHEGEVTTTDPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALDLQFDDGRIPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKILN 355
RARN+ E L+ +E +RW+ + R ++ + L++E+LL+ +A+E+ K+L
Sbjct: 410 RARNYPELLNDQEAQRWRIFCQQRLSDQD--------YLLKLENLLQDTEADEYKQKLLA 461
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 462 ALCHYLRGL 470
>gi|54308882|ref|YP_129902.1| exonuclease I [Photobacterium profundum SS9]
gi|46913312|emb|CAG20100.1| putative exonuclease I [Photobacterium profundum SS9]
Length = 474
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 200/363 (55%), Gaps = 12/363 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL+++++ Y L P G+ WP + G PSFKLEHLS N +
Sbjct: 114 LYRNFYDPYAWGWQNGNSRWDLLDIMRTCYALRPEGVNWPNNDEGLPSFKLEHLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++++ N P+LFN++ LR K+ + I P +++ M
Sbjct: 174 EHANAHDAMADVYATIELAKILKTNQPKLFNYLFDLRHKRKLQELIDIVNLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F S + P+ HP NKN +IT NL DP + D ++IR+ + K++ K D
Sbjct: 234 FGVGCGNTSWIVPMAWHPDNKNAVITVNLAQDPTPLIELDADQIRERMYTKRSELKPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++HLN+ P V++ K L + R D KN++ + + + +K+
Sbjct: 294 PIPVKLVHLNKCP-VLAPAKTLKAEDADRIGIDRAQCLKNLQI---LKEHPEVREKLVAI 349
Query: 239 YKINNSDLE-LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + E ++D LY+ F S D + I+R +P+ L+ + E+K+++ L+F Y
Sbjct: 350 FAVQREYKENTDVDSMLYDGFFSTSDRSSIDIIRESTPEALAEIKLNVEDKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+Y+E ++W K+ F+ Y N + E+ ++NEH KIL AL
Sbjct: 410 RARNFPMTLNYEEQQKW-KHHCQDFFQDNLPAYMENFEAVATEN---QSNEHKMKILKAL 465
Query: 358 LMY 360
Y
Sbjct: 466 YDY 468
>gi|398927180|ref|ZP_10662863.1| exonuclease I [Pseudomonas sp. GM48]
gi|398170155|gb|EJM58110.1| exonuclease I [Pseudomonas sp. GM48]
Length = 476
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 204/373 (54%), Gaps = 13/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGMQWPTDDEGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP NKN LI +L DP+ L D +R L ++ E
Sbjct: 227 FSAARSYVGVVLPLAWHPRNKNALIVCDLHLDPQSLLDLDAESLRQRLYCRREELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IW-KKIF 236
+P+ +IH+N+ P V++ L VL R D+ + + LN+ +W KI
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRKEDQQRLGLDMALYQQRVL----RLNDAQKVWLDKIL 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F
Sbjct: 342 AIYAREDFSPNQDPEQQLYDGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILN 355
YRARNF +TL+ +E +RW+ + R + N ++E + L A +L+
Sbjct: 402 YRARNFPDTLNSEEHERWRIFCQKRLSEPEWGAPNTLESFVETAAQLSVSATPFQQGVLS 461
Query: 356 ALLMYGKSITQKI 368
Y + + Q++
Sbjct: 462 EWQDYVQGLRQRL 474
>gi|421616921|ref|ZP_16057922.1| exonuclease I [Pseudomonas stutzeri KOS6]
gi|409781151|gb|EKN60755.1| exonuclease I [Pseudomonas stutzeri KOS6]
Length = 478
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 206/374 (55%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P G+ WP + +G+ + KLE LS N L
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGLAWP-EEDGRVTLKLERLSVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R+ PRL++++ +LR+K+ VL +I + P +++
Sbjct: 169 EHLNAHDALSDVRATIALARLVRDRQPRLYDYLYNLRRKQAVLEQIN--LFEPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ ++S++ P+ HP N+N LI +L +P +R L + + +
Sbjct: 227 FSAARHFLSVVLPLAWHPGNRNALIVCDLQAEPDLLWSESAEALRKRLYTRHDQLADGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW----KK 234
+P+ ++H+NR P V++ LKVL + + R D+ A+ + + + W
Sbjct: 287 PVPLKLVHVNRCP-VLAPLKVLRAADIQRLGLDMPACHAR---AALLREHRHAWSDKLAD 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
I+ + SD + +++LY+ F+ ++D +R+++P +L+ F++ +LE L+
Sbjct: 343 IYREEGFRGSD---DPEQQLYDGFLGERDRRLCEQIRNLAPAELARHPCRFDDVRLEALL 399
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKI 353
F YRARNF TLS E +W+++ R + N + F EI+ L+ A ++
Sbjct: 400 FRYRARNFPATLSGPEQLQWREFCQQRLSDPACGAPNTLVQFEAEIQRLMSTAAPEQQRL 459
Query: 354 LNALLMYGKSITQK 367
L YG+ + ++
Sbjct: 460 LQQWREYGQGLYER 473
>gi|56460478|ref|YP_155759.1| exonuclease I [Idiomarina loihiensis L2TR]
gi|56179488|gb|AAV82210.1| Exonuclease I [Idiomarina loihiensis L2TR]
Length = 479
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 197/370 (53%), Gaps = 9/370 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE W+N SRWDLI+V++A + L P GI WP ++G+PS KLEHLS NN
Sbjct: 113 LFYRNFYDPYEYSWQNGNSRWDLIDVVRACFALRPDGINWPENSDGQPSLKLEHLSVANN 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+GLA+LI P+L+ + S+R+K+ +L W P +++
Sbjct: 173 IEHGQAHDAMSDVYATIGLAKLISEKQPKLWQWAYSIRRKQKLLNLFNWQAPEPLAHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + + Y+S + P+ HP + ++ W+L P F + ++ + + +E
Sbjct: 233 FYGTANRYLSAILPLGFHPKQNSNVVAWDLRVPPMDFADKSVEELTELTYTSRRELEEQG 292
Query: 180 ---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
I IHL R P ++ +K +S+ D N K N+ + K +
Sbjct: 293 LQKSGIQNIHLGRCPF-LAPIKTISAEAADSAALDTAALETNAKWLQE--NSDFRDKLMQ 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + ++D ++Y+ F S +D + I+RS P +L+ + F++K++ L+F
Sbjct: 350 VFEQTKEFAPRTDVDHQIYDGFFSPQDKKHMEIIRSSEPHQLAGLELDFQDKRMPALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANE--HDTKIL 354
YRARN+ TLS KEL +W+ + R L + F L++E L + E H ++L
Sbjct: 410 YRARNYPSTLSDKELNKWRLFCQQRLIEPPEGLLSAEGFALKLEDLANQHQEDAHKLRLL 469
Query: 355 NALLMYGKSI 364
+L Y S+
Sbjct: 470 KSLYDYAASL 479
>gi|455739892|ref|YP_007506158.1| Exodeoxyribonuclease I [Morganella morganii subsp. morganii KT]
gi|455421455|gb|AGG31785.1| Exodeoxyribonuclease I [Morganella morganii subsp. morganii KT]
Length = 472
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 201/373 (53%), Gaps = 17/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W N SRWDLI++ +A Y L P G WP + G PSFKLEHL+ N
Sbjct: 110 IFYRNFYDPYAYSWMNRNSRWDLIDITRACYALRPDGTNWPENDEGLPSFKLEHLTAANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DV AT+ +A+ +R PRLF++ SLR K+ + A I P +P +++
Sbjct: 170 IAHENAHDAMADVYATIAMAKQLRGAQPRLFDYFFSLRDKRKLAALIDIPSMKPLVHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + SL+ P+ HP N+N +I +L D L D + +R++L +++ E
Sbjct: 230 MFGAVRANTSLVAPLAWHPDNRNAVIMCDLAGDLTPLLTLDADTLREHLYTRRDELPEGA 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ L R D + +N A + + I +K+
Sbjct: 290 SPVPLKLVHINKCPILAPE-NTLRPQDAQRIGLDKDLCARN---AELLHQHPEIREKVVA 345
Query: 238 DY-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + ++D +Y F S D + I+R PK L + +++ +L EL+F
Sbjct: 346 VFAQPREFPPQNDVDHMIYQGFFSDSDKAAMTIIRETDPKNLPALALSYQDARLPELLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD---TKI 353
YRARNF TL E +RW +R F N N+ ++ +I ++++ +HD T++
Sbjct: 406 YRARNFPGTLDEHEQQRWLAHRREVF-----NQDNLTRYFEQIGEMMQE-YQHDANKTEL 459
Query: 354 LNALLMYGKSITQ 366
L L+ Y + + Q
Sbjct: 460 LKKLVQYAQHLAQ 472
>gi|407792824|ref|ZP_11139860.1| exonuclease I [Idiomarina xiamenensis 10-D-4]
gi|407217082|gb|EKE86918.1| exonuclease I [Idiomarina xiamenensis 10-D-4]
Length = 486
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 14/373 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY W+ SRWDLI++++A Y L P GI WP +G+ S KLE L+ N
Sbjct: 119 LFYRNFIDPYAHTWQQGNSRWDLIDLVRACYALRPDGIQWPRHEDGRVSMKLEDLTAANG 178
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA++DV AT+ +ARLIR P+L+++ +LR KK V +I +P +++
Sbjct: 179 IDHGQAHDAMADVYATIAIARLIREQQPKLWDYAFNLRTKKAVQQQIDLLQRKPLVHVSG 238
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + Y+S + P+ HP N+L+ W+L HDP+ I+++R+ K ++
Sbjct: 239 HYGAAQGYVSYLMPLAYHPQQANVLLGWDLRHDPRAIANLSIDQLRERFYLPKAEREQQQ 298
Query: 180 ---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK--CASSILNNTYIWKK 234
+ + + +NR P + + VLS + D ++ + A + L I
Sbjct: 299 LASVALHKVAINRCPFIAPS-NVLSDERGAHFGLDKAQCLQHYQQLQADAELRERLIDAL 357
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
DY D EL +LY +F ++D + ++R P++L+ + F F + +L L
Sbjct: 358 SENDYPAPADDPEL----QLYSGDFFGEQDKSNMRLIREADPEQLAGMQFNFVDARLPTL 413
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDT 351
+F YRARNF TLS +EL+RW+++ R +I + L++E L ++ + +
Sbjct: 414 LFRYRARNFPATLSEQELQRWQRFCQQRLMEPLAGALSIEEYALKLEHLAEQHSGDANKL 473
Query: 352 KILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 474 AILRALYQYAQSL 486
>gi|92115139|ref|YP_575067.1| exonuclease I [Chromohalobacter salexigens DSM 3043]
gi|91798229|gb|ABE60368.1| Exodeoxyribonuclease I subunit C [Chromohalobacter salexigens DSM
3043]
Length = 495
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 207/378 (54%), Gaps = 17/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY REW+N SRWDLI+V++ ++ L P GI WP + +G PSF+LE L+ N
Sbjct: 114 LFYRNFIDPYSREWQNGNSRWDLIDVVRTYHALRPDGIEWPTREDGAPSFRLEDLTAANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+ LARL++ N +LF ++L LR K+ V + +P +++
Sbjct: 174 IEHAGAHDALADVRATIELARLLKARNAQLFEYLLKLRDKRTVARMLDIQARKPMLHVSR 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + +L+ P+ HP N N +I ++L DP L + +IR+ + + E
Sbjct: 234 RYPASRGCSALVVPLAEHPSNPNGVIVYDLSVDPSPLLSMEAAQIRERVFASADELAEGE 293
Query: 180 --IPISMIHLNRSPIVI--SNLKVLS-------SNLMFRYKFDLNCAFKNIKCASSILNN 228
IP+ +IH+N+SP+++ ++LK + L+ R D+ ++ K + +
Sbjct: 294 ARIPLKVIHINKSPVIMPAASLKDVDGPQRGEYGALVARLGLDMAACRRHWKQLQAAPDV 353
Query: 229 TYIWKKIFLDY-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
++F + SD +L + F S D ++ R M L+ +F F++
Sbjct: 354 AAKAAEVFAEGPGAPPSDPDLML---YSGGFFSPADRREMQRAREMPAWDLAEASFAFQD 410
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KA 346
+LEE++F RARN+ +TLS +E +W+ YR +R + + + F EIE L +
Sbjct: 411 PRLEEMLFRLRARNYPDTLSSEEQAQWEAYRWARMNDAEVASLTLTGFAREIERLNQVPL 470
Query: 347 NEHDTKILNALLMYGKSI 364
++ ++L L+M+ +++
Sbjct: 471 DDAQRQVLEELVMHVEAM 488
>gi|90415078|ref|ZP_01223036.1| putative exonuclease I [Photobacterium profundum 3TCK]
gi|90323813|gb|EAS40426.1| putative exonuclease I [Photobacterium profundum 3TCK]
Length = 474
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 200/363 (55%), Gaps = 12/363 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL+++++ Y L P G+ WP + G PSFKLEHLS N +
Sbjct: 114 LYRNFYDPYAWGWQNGNSRWDLLDIMRTCYALRPEGVNWPNNDEGLPSFKLEHLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++++ N P+LFN++ LR K+ + + P +++ M
Sbjct: 174 EHANAHDAMADVYATIELAKILKTNQPKLFNYLFDLRHKRKLQELVDIVNLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F S + P+ HP NKN +IT NL DP + D ++IR+ + K++ K D
Sbjct: 234 FGVGCGNTSWIVPMAWHPDNKNAVITVNLAQDPTPLIELDADQIRERMYTKRSELKPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++HLN+ P V++ K L + R D KN++ + + I +K+
Sbjct: 294 PIPVKLVHLNKCP-VLAPAKTLKAEDANRIGIDRAQCLKNLQI---LKEHPEIREKLVAI 349
Query: 239 YKINNSDLE-LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + E ++D LY+ F S D + I+R +P+ L+ + E+K+++ L+F Y
Sbjct: 350 FAVQREYKENTDVDSMLYDGFFSNSDRSSIDIIRESTPEALAEIQLNVEDKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+Y+E ++W K+ F+ Y N + E+ ++NEH KIL AL
Sbjct: 410 RARNFPLTLNYEEQQKW-KHHCQDFFQDNLPAYMENFEAVATEN---QSNEHKMKILKAL 465
Query: 358 LMY 360
Y
Sbjct: 466 YDY 468
>gi|387895371|ref|YP_006325668.1| exodeoxyribonuclease I [Pseudomonas fluorescens A506]
gi|387164255|gb|AFJ59454.1| exodeoxyribonuclease I [Pseudomonas fluorescens A506]
Length = 475
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 200/372 (53%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVMRTAYALRPEGINWP-EQDGRVTLKLERLTEANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLVREKQPKLYEWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDAATLRQRLYTRRDELAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ LKVL + R + D A + + +W+ K+
Sbjct: 286 PVPLKLLHINRCP-VVAPLKVLRPQDLERLQLDKEACLAR---ALRLTDAQEVWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAEEDFASNADPEQQLYEGFIGDRDRRLCEQVRMAEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEI-ESLLKKANEHDTKILNA 356
RARNF ETL+ E +RWK + R + N + + + E L A ++L
Sbjct: 402 RARNFPETLNNDEQQRWKLFCQQRLSEAQWGAPNTLLAFKQAREELAVSATSFQCQVLAQ 461
Query: 357 LLMYGKSITQKI 368
Y S+ ++
Sbjct: 462 WQDYVDSLAARL 473
>gi|421494282|ref|ZP_15941632.1| SBCB [Morganella morganii subsp. morganii KT]
gi|400191449|gb|EJO24595.1| SBCB [Morganella morganii subsp. morganii KT]
Length = 413
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 201/373 (53%), Gaps = 17/373 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W N SRWDLI++ +A Y L P G WP + G PSFKLEHL+ N
Sbjct: 51 IFYRNFYDPYAYSWMNRNSRWDLIDITRACYALRPDGTNWPENDEGLPSFKLEHLTAANG 110
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA++DV AT+ +A+ +R PRLF++ SLR K+ + A I P +P +++
Sbjct: 111 IAHENAHDAMADVYATIAMAKQLRGAQPRLFDYFFSLRDKRKLAALIDIPSMKPLVHVSG 170
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + SL+ P+ HP N+N +I +L D L D + +R++L +++ E
Sbjct: 171 MFGAVRANTSLVAPLAWHPDNRNAVIMCDLAGDLTPLLTLDADTLREHLYTRRDELPEGA 230
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ L R D + +N A + + I +K+
Sbjct: 231 SPVPLKLVHINKCPILAPE-NTLRPQDAQRIGLDKDLCARN---AELLHQHPEIREKVVA 286
Query: 238 DY-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + ++D +Y F S D + I+R PK L + +++ +L EL+F
Sbjct: 287 VFAQPREFPPQNDVDHMIYQGFFSDSDKAAMTIIRETDPKNLPALALSYQDARLPELLFR 346
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD---TKI 353
YRARNF TL E +RW +R F N N+ ++ +I ++++ +HD T++
Sbjct: 347 YRARNFPGTLDEHEQQRWLAHRREVF-----NQDNLTRYFEQIGEMMQEY-QHDANKTEL 400
Query: 354 LNALLMYGKSITQ 366
L L+ Y + + Q
Sbjct: 401 LKKLVQYAQHLAQ 413
>gi|398865413|ref|ZP_10620931.1| exonuclease I [Pseudomonas sp. GM78]
gi|398243269|gb|EJN28861.1| exonuclease I [Pseudomonas sp. GM78]
Length = 476
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N L
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ VL ++ + +P +++
Sbjct: 169 DHGNAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVLDQVR--LLQPMVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP NKN LI +L DP+ L D +R L ++ E
Sbjct: 227 FSAARNYVGVVLPLAWHPRNKNALIVCDLHLDPQGLLDLDAETLRQRLYTRREDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P V++ L VL R D+ + A + + W+ K+
Sbjct: 287 PVPLKLIHINKCP-VVAPLSVLRPEDQLRLGMDVALYQQR---ALRLSDAQQDWQAKVLA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R++ P +L+ + F++++L EL+F Y
Sbjct: 343 IYAREDFSSSEDPEQQLYDGFIGDRDRRLCEQVRTVDPLQLAQEQWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TLS E +RW+
Sbjct: 403 RARNFPDTLSLDEQERWR 420
>gi|229592327|ref|YP_002874446.1| exonuclease I [Pseudomonas fluorescens SBW25]
gi|229364193|emb|CAY51862.1| exodeoxyribonuclease I [Pseudomonas fluorescens SBW25]
Length = 475
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 186/318 (58%), Gaps = 11/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIEWP-QQDGRVTLKLERLTEANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LAR IR P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARRIREKQPKLYEWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D + +R L ++ + E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDADTLRQRLYTRREALAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL + R D+N + A + + +W+ K+
Sbjct: 286 PVPLKLVHINRCP-VVAPLNVLRAEDRERLHLDMNIYQER---ALRLTDAQEVWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAEEDFAASADPEQQLYDGFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TL+ +E +RWK
Sbjct: 402 RARNFPDTLNSEEQQRWK 419
>gi|333899170|ref|YP_004473043.1| exodeoxyribonuclease I [Pseudomonas fulva 12-X]
gi|333114435|gb|AEF20949.1| Exodeoxyribonuclease I [Pseudomonas fulva 12-X]
Length = 480
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 201/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP +G S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIEWPQDEHGV-SLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ LR K+ VL +I + +P +++
Sbjct: 169 DHGQAHDALSDVRATIALARLIRERQPKLYDYLYGLRSKQQVLDQIR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
FS Y++++ P+ HP N+N LI +L D D + +R L +++ ++P
Sbjct: 227 FSGARHYLAVVLPLAWHPRNRNALIVCDLHLDTAPLHDEDADTLRQRLYTRRDELGGELP 286
Query: 182 IS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLD 238
+ +IH+NR P V++ L VL R + D K + +N W+ K+
Sbjct: 287 VPLKLIHINRCP-VVAPLGVLRDEDCQRLQLDKTELQARAK---RLADNQEQWRDKLPQV 342
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++ +++LY+ FI +D +R+ P +L+ ++ F++ +L EL+F YR
Sbjct: 343 YTEESFASVMDPEQQLYDGFIGDRDRRLCEQVRNCDPSQLAAQSWPFDDARLPELLFRYR 402
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNAL 357
ARNF TLS ++ +RW + R + N + F E+ L +ANE L+A
Sbjct: 403 ARNFATTLSSEDQQRWHAFCRQRLTLPELGAPNTLVSFETEMARYLTEANESQQATLHAW 462
Query: 358 LMYGKSITQK 367
L + + + Q+
Sbjct: 463 LAHAQQLRQR 472
>gi|377577431|ref|ZP_09806413.1| exodeoxyribonuclease I [Escherichia hermannii NBRC 105704]
gi|377541169|dbj|GAB51578.1| exodeoxyribonuclease I [Escherichia hermannii NBRC 105704]
Length = 474
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 22/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+NN SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNNNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ S R K+ + I P +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAKLVKAQQPRLFGYLYSHRTKQKLATLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +D
Sbjct: 234 MFGAWRGNTSWIAPLAWHPDNRNAVIMVDLAGDMTPLLELDADALRERLYTAKTDLGDDA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ PI ++ L R D N+K + ++ + +K+
Sbjct: 294 AVPIKLVHLNKCPI-LAQANTLRPEDADRLGIDRQRCLDNLKI---LRDHPDVREKVVAL 349
Query: 239 YKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
Y +D E ++D +LYN F S D + I+ P+ L ++ F +K++E+L
Sbjct: 350 Y----ADAEPFTPSEDVDTQLYNGFFSDADRAGMRIILQTDPQNLPALDISFVDKRIEKL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDT 351
+F YRARNF TL ++E +RW ++R +RF + Y + M Y + E ++
Sbjct: 406 LFNYRARNFPGTLDHEEQQRWLRHRQARFTPEFLQAYAQELEMLYGQYE-----GDKEKI 460
Query: 352 KILNALLMYGKSI 364
+L AL Y + +
Sbjct: 461 GLLRALYQYVQDV 473
>gi|399521636|ref|ZP_10762376.1| exodeoxyribonuclease I [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110874|emb|CCH38936.1| exodeoxyribonuclease I [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 482
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 204/373 (54%), Gaps = 13/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIEWP-EEEGRVSLKLERLTQANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+GLARL+R +L++F+ LR K+ V+ ++ + +P +++
Sbjct: 169 DHGQAHDALSDVRATIGLARLLRERQTKLYDFLYQLRSKQRVMDQVR--LLQPVLHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y++ + P+ HP N+N LI +L DP L D + +R L ++ + E
Sbjct: 227 FSAARHYLAPVLPLAWHPRNRNALIVCDLQADPSPLLNLDADTLRSRLYTRREALAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P V++ L VL R + D + ++I + N +W K+
Sbjct: 287 PVPLKLLHINRCP-VVAPLSVLREADRQRLQLDWSVCQRHIDV---LKNEQPLWLGKLAS 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLS-NVNFCFENKKLEELIFL 296
Y+ + +++LY+ FI +D +R+ P L+ N + F++ +L EL+F
Sbjct: 343 VYREEAFAGSHDPEQQLYDGFIGDRDRRLCEQVRAAQPDALANNKKWPFDDARLPELLFR 402
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF +LS E +RW+ + R + + N + FY +ESL + ++L
Sbjct: 403 YRARNFPASLSVAESQRWEAFCRQRLSDPEFGAPNTLAQFYAAMESLRANCSPEQLQVLQ 462
Query: 356 ALLMYGKSITQKI 368
+ +++ ++
Sbjct: 463 QWQAHAQALQARL 475
>gi|163752570|ref|ZP_02159753.1| exodeoxyribonuclease I [Shewanella benthica KT99]
gi|161327543|gb|EDP98744.1| exodeoxyribonuclease I [Shewanella benthica KT99]
Length = 470
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 207/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+ SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQKGNSRWDIIDLVRACYAFRPEGIEWPLKEDGTPSFKLEHLTKANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+LF++ LR+K+ V ++ P +++
Sbjct: 174 SHEKAHDAMSDVYATIDMAKLIKQKQPKLFDYYFQLRRKQEVSKQLDVLNMLPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S++H +L+ P+ H NKN +I NL D + D +IR+ + +++ +D +
Sbjct: 234 ISAEHGCTTLIAPVAHHSSNKNAIICVNLAMDISPLIELDAEQIRERMYTRRDDLADDEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PIS+ IH+N+ P + S K+L+ L R D A + K + + + +K+
Sbjct: 294 PISVKQIHINKCPFITSP-KILTDELAQRLNIDKAFAREQYKL---LKQHPELREKLVAV 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + + + D +LY F D K+ I+R P+ L+ + F++++L+E++F Y
Sbjct: 350 FDVEHDNGSQDPDLQLYSGGFFGSADKEKMEIIRHTLPQNLAALELNFDDQRLKEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL-KKANEHD-TKILN 355
RARN+ TL E +W+ + SR N + +++E+L+ AN+ D K+L
Sbjct: 410 RARNYPATLDESESMKWRDFCQSRL--------NDPEYMMQLENLVNDTANDEDKQKLLT 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|416891752|ref|ZP_11923299.1| exodeoxyribonuclease I [Aggregatibacter aphrophilus ATCC 33389]
gi|347815300|gb|EGY31940.1| exodeoxyribonuclease I [Aggregatibacter aphrophilus ATCC 33389]
Length = 475
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 196/369 (53%), Gaps = 22/369 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK + I P +++ M
Sbjct: 174 EHTNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEIEKLINTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L + L ++R+ L KK + E
Sbjct: 234 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELREKLYTKKETLLEARV 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ +IH+N+ PIV +LS N R D +N +L + I +K+
Sbjct: 294 LPVPLKLIHINKCPIVAPEKTLLSQNAE-RLGIDRELCAQN---QQRLLASKDIRQKVMD 349
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
D + SD N++ ELYN F S D +AILR++ P+KL+ N F++ ++ +L
Sbjct: 350 IFQQDREFEPSD---NVETELYNGFFSDADKNNIAILRTLEPEKLAEHNLSFQDPRIPQL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYR-------ISRFYNKKNNLYNINMFYLEIESLLKKA 346
+F YRAR+F TL+ E +W+KYR + RF L N E +LL+K
Sbjct: 407 LFHYRARHFYRTLNRAEQIKWQKYRQKKLEAEVLRFEQSLQELATQNEHNEEKLTLLRKV 466
Query: 347 NEHDTKILN 355
E+ KI+
Sbjct: 467 YEYGNKIIG 475
>gi|408480152|ref|ZP_11186371.1| exonuclease I [Pseudomonas sp. R81]
Length = 475
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 202/372 (54%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+VI+ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVIRTAYALRPEGIEWP-QQDGRVTLKLERLTEANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LAR +R P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARRVREKQPKLYEWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D + +R L ++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDADTLRQRLYTRREDLAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++++NR P V++ L VL + R D+N + A + + +W+ K+
Sbjct: 286 PVPLKLVYINRCP-VVAPLNVLRTEDRERLHLDMNIYQER---ALRLTDAQEVWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ FI +D +R+ P +L+ + F++ +L EL+F Y
Sbjct: 342 VYAEEGFASSSDPEQQLYDGFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TL+ +E +RW+ + R + + N + F + A T++L
Sbjct: 402 RARNFPDTLNSEEQQRWQLFCQQRLSDPEWGAPNTLAAFKQAKQEFAVSATPFQTEVLER 461
Query: 357 LLMYGKSITQKI 368
Y S+ K+
Sbjct: 462 WQEYADSLAHKV 473
>gi|409417708|ref|ZP_11257734.1| exonuclease I [Pseudomonas sp. HYS]
Length = 476
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 201/359 (55%), Gaps = 12/359 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY RE + SRWDLI++++A Y L P GI WP + +G+ S +LE L+ N +
Sbjct: 110 LYRNFFDPYAREGRGATSRWDLIDIVRAAYALRPDGIEWP-QQDGRTSLRLELLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AH+ALSDVRAT+ LARLIR P+L++++ LR K+ VL +I + +P +I+
Sbjct: 169 DHGQAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKQKVLDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D + + D + +R L ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHLDAQPLIDEDADSLRQRLYTRREEMPDGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL R + D++ A+S++ W+ K+ +
Sbjct: 287 PVPLKLIHINRCP-VVAPLSVLRGEDQQRLELDMSVYQAR---AASLIATAGQWQDKLPV 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ F+ +D +RS+ P++L + F++++L EL+F Y
Sbjct: 343 IYSAEEFAPSEDPEQQLYDGFLGDRDRRLCEQVRSVDPQQLGQGQWMFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
RARNF ETL+ +E +RW+ + R + N + F ++ +A+ +L
Sbjct: 403 RARNFNETLNAEERQRWQTFCQQRLSDPLMGAPNTLGDFERALQDCWAEADAQQQALLG 461
>gi|395650801|ref|ZP_10438651.1| exonuclease I [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 475
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 205/372 (55%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIEWP-QQDGRVTLKLERLTEANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LAR IR P+L+ ++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARRIRERQPKLYAWLFQLRTKQKVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDAQVLRQRLYTRRDELAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL + R D+ + A + + +W+ K+
Sbjct: 286 PVPLKLVHINRCP-VVAPLNVLRAEDCERLHLDMGIFQER---ALRLSDAQELWRDKLAA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R++ P +L+ + F++ +L EL+F Y
Sbjct: 342 IYAEEDFVPSTDPEQQLYDGFIGDRDRRLCEQVRTVEPAQLARQQWPFDDHRLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TLS +E +RWK + R + + N + +F L + L A ++L
Sbjct: 402 RARNFPDTLSSEEQQRWKLFCQQRLSDPEWGAPNTLQVFNLARQELAVSATPFQCEVLAQ 461
Query: 357 LLMYGKSITQKI 368
Y ++ ++
Sbjct: 462 WQEYVDALAARL 473
>gi|386016341|ref|YP_005934627.1| exodeoxyribonuclease I SbcB [Pantoea ananatis AJ13355]
gi|327394409|dbj|BAK11831.1| exodeoxyribonuclease I SbcB [Pantoea ananatis AJ13355]
Length = 412
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 203/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 51 IFYRNFYDPYGWSWQNGNSRWDLLDVMRACYALRPEGINWPENEDGFPSFRLEHLTKANG 110
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 111 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMTLIDIPQMKPLVHVSG 170
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N LI +L D L D + +R+ L +K+ +
Sbjct: 171 MFGAARGNTSWVVPLAWHPDNRNALIVVDLAGDMTPLLTLDADSLRERLYTRKSELGDQS 230
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
IP+ ++H+N+ P V++ L R D N+ +++ + I +K I
Sbjct: 231 AIPVKLVHINKCP-VLAPANTLRPEDAGRLGIDRKSCLDNL---ATLRQHPEIREKLVAI 286
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD ++D +LY+ F S D + I+R +P L ++ F++ ++ +L+
Sbjct: 287 FADAEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLTFDSPRVAKLL 343
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTK 352
F YRARNF TL E +RW ++R K + F +E+ESL L ++++
Sbjct: 344 FRYRARNFPGTLDDAEQQRWLQHRREVLNPDK-----VQSFLMELESLASLHESDQEKLA 398
Query: 353 ILNALLMYGKSI 364
L AL +Y + +
Sbjct: 399 QLKALYLYAQEL 410
>gi|291618007|ref|YP_003520749.1| SbcB [Pantoea ananatis LMG 20103]
gi|378766600|ref|YP_005195062.1| exodeoxyribonuclease I [Pantoea ananatis LMG 5342]
gi|386078795|ref|YP_005992320.1| exodeoxyribonuclease I SbcB [Pantoea ananatis PA13]
gi|291153037|gb|ADD77621.1| SbcB [Pantoea ananatis LMG 20103]
gi|354987976|gb|AER32100.1| exodeoxyribonuclease I SbcB [Pantoea ananatis PA13]
gi|365186075|emb|CCF09025.1| exodeoxyribonuclease I [Pantoea ananatis LMG 5342]
Length = 473
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 203/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 112 IFYRNFYDPYGWSWQNGNSRWDLLDVMRACYALRPEGINWPENEDGFPSFRLEHLTKANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 172 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMTLIDIPQMKPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N LI +L D L D + +R+ L +K+ +
Sbjct: 232 MFGAARGNTSWVVPLAWHPDNRNALIVVDLAGDMTPLLTLDADSLRERLYTRKSELGDQS 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
IP+ ++H+N+ P V++ L R D N+ +++ + I +K I
Sbjct: 292 AIPVKLVHINKCP-VLAPANTLRPEDAGRLGIDRKSCLDNL---ATLRQHPEIREKLVAI 347
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD ++D +LY+ F S D + I+R +P L ++ F++ ++ +L+
Sbjct: 348 FADAEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLTFDSPRVAKLL 404
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTK 352
F YRARNF TL E +RW ++R K + F +E+ESL L ++++
Sbjct: 405 FRYRARNFPGTLDDAEQQRWLQHRREVLNPDK-----VQSFLMELESLASLHESDQEKLA 459
Query: 353 ILNALLMYGKSI 364
L AL +Y + +
Sbjct: 460 QLKALYLYAQEL 471
>gi|392551346|ref|ZP_10298483.1| exonuclease I [Pseudoalteromonas spongiae UST010723-006]
Length = 479
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 207/376 (55%), Gaps = 23/376 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+N SRWD+I++++A Y L P GI WP K +G PSFKLE L+ N +
Sbjct: 114 FYRNFYDPYAREWQNGNSRWDIIDLVRATYALRPEGINWPEKEDGTPSFKLEDLTAANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI++ P+++++ +LR KK + P +++
Sbjct: 174 DHSNAHDALSDVTATIALAKLIKDKQPKMYHYYFNLRFKKAAQDLVDVFNMTPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK-NSFKEDI 180
+ + + P+ H NKN +I +NL DP + + +IR+ L K+ N E +
Sbjct: 234 IPASQGCTTWIAPMAFHHQNKNAVICFNLALDPTPLIELSVEEIRERLYTKRENLTDEQL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI + +H+N+ P + +L N R D N+K + + + +K+
Sbjct: 294 PIGLKQVHVNKCPFIAPAKTLLPENAE-RLGIDREACLANLKL---LRAHPELREKVV-- 347
Query: 239 YKINNSDLEL----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ N D L N D LY F S D K I+R+ P +L+ + F++ K EL+
Sbjct: 348 -EVFNDDSHLTPITNPDYALYQGFASSGDKSKFDIIRTTEPSQLAGLQLEFDDAKYNELL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDT-- 351
F YRARN+ E+LS++EL++W+KY + + ++N + N F L +E+L A+EH++
Sbjct: 407 FRYRARNWPESLSHQELEKWRKYCQGKLMHGEDNPSIDANEFMLSLENL---AHEHESDE 463
Query: 352 ---KILNALLMYGKSI 364
IL AL Y +S+
Sbjct: 464 KKMAILKALYHYAQSL 479
>gi|157371451|ref|YP_001479440.1| exonuclease I [Serratia proteamaculans 568]
gi|157323215|gb|ABV42312.1| Exodeoxyribonuclease I [Serratia proteamaculans 568]
Length = 475
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 202/374 (54%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPDGIVWPENEDGFPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHEHAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDIAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
MF + S + P+ HP NKN +I +L D L +++R+ L ++ +
Sbjct: 233 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSADELRERLYTRREDLAPGQ 292
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI-- 235
+PI ++H+N+ P++ +L N R D +N++ + + + +K+
Sbjct: 293 SPVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LRQHPQVREKVVA 348
Query: 236 -FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
F D + SD ++D LY+ F S D + I++ P+ L ++ F + +L+EL
Sbjct: 349 LFADAEPFKGSD---DVDARLYDGFFSDADKATMKIIQQTKPQNLPALDLTFNDGRLKEL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDT 351
+F +RARN+ TL E +RW ++R ++ + + L++ESL L + ++ T
Sbjct: 406 LFRFRARNYPNTLDDTEQRRWLQHRQEALSAER-----VQSYVLQLESLYNLHEGDQEKT 460
Query: 352 KILNALLMYGKSIT 365
+L AL YGK +
Sbjct: 461 ALLKALFEYGKELV 474
>gi|386313348|ref|YP_006009513.1| Exodeoxyribonuclease I [Shewanella putrefaciens 200]
gi|319425973|gb|ADV54047.1| Exodeoxyribonuclease I [Shewanella putrefaciens 200]
Length = 470
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 205/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI W K++G PSFKLEHL+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWSLKDDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LIR P+L+++ LR+K+ V +I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIREKQPKLYHYYFELRRKQAVSDQIDVLNMQPLAHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+++ +L+ P+ HP NKN +I NL D +I +I+ + + ED
Sbjct: 234 ISARNGCTTLISPVAHHPTNKNAVICVNLAMDLSPLFDLNIEQIKTRMYTARAELAEDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+ P + S K+L R D A + K + N+ + +K+
Sbjct: 294 PIPVKQIHLNKCPFITS-AKILDDAQASRLNIDKAFAREQYK---RLRNHPELREKLAQL 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + ++ D LY F S D K+ I+R P+ L+ + F++ ++ E++F Y
Sbjct: 350 FEHDGESTTVDPDLMLYSGGFFSSADKAKMEIIRHTLPQNLAALELQFDDVRMPEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
RARN+ E L +E RW+++ +R ++ + L++E+LL+ +E+ K+L
Sbjct: 410 RARNYPELLDDQESHRWREFCQNRLADQD--------YLLKLENLLQNTVDDENKQKLLA 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|404401521|ref|ZP_10993105.1| exonuclease I [Pseudomonas fuscovaginae UPB0736]
Length = 478
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 198/360 (55%), Gaps = 14/360 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + +LE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGIVWP-EEDGRVTLRLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR PRL+ ++ LR K+ VL +I + +P +I+
Sbjct: 168 DHGHAHEALSDVRATIALARLIRERQPRLYEWLFQLRSKQRVLDQIR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L DP+ L D +R +L ++ +
Sbjct: 226 FSAARHYLGVVLPLAWHPSNRNALIVCDLHEDPQPLLELDAESLRRHLYTRREDMADGQL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IWK-KIF 236
+P+ +IH+NR P V++ + VL R D+ + LN+ +W+ K+
Sbjct: 286 PVPLKLIHVNRCP-VVAPMNVLREPDQQRLHLDMAL----YEARRLRLNDAQEVWRDKVQ 340
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ F+ +D +R+ P++L+ + F++++L EL+F
Sbjct: 341 AIYAAQDFIPSEDPEQQLYDGFLGDRDRRLCEQVRNCGPEQLAREPWPFDDERLPELLFR 400
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF E+LS +E +RW+K+ R N + F+ + S A ++L
Sbjct: 401 YRARNFPESLSEEEQERWRKFCRQRLSEASWGAPNTLAQFHEALASSFPNATPEQAQVLG 460
>gi|440742240|ref|ZP_20921566.1| exonuclease I [Pseudomonas syringae BRIP39023]
gi|440377563|gb|ELQ14208.1| exonuclease I [Pseudomonas syringae BRIP39023]
Length = 476
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 197/345 (57%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEDAEILKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSEHREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ F+ +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFAASEDPEQQLYDGFMGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
RARNF +TLS +E RW+ + R + N L++ +E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAALIE 447
>gi|423698981|ref|ZP_17673471.1| exodeoxyribonuclease I [Pseudomonas fluorescens Q8r1-96]
gi|387996303|gb|EIK57633.1| exodeoxyribonuclease I [Pseudomonas fluorescens Q8r1-96]
Length = 477
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 186/318 (58%), Gaps = 11/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDLVRAAYALRPQGIVWP-QEDGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K+ V+ +I + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIRQQQPRLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +YI L+ P+ HP N+N LI +L DP+ L +D +R L ++ E
Sbjct: 226 FSAARNYIGLVLPLAWHPKNRNALIVCDLHLDPQGLLDHDAESLRQRLYTRREELLEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P VI+ L VL + R + D+ + A + + +W+ K+
Sbjct: 286 PVPLKLIHINKCP-VIAPLSVLRAEDQQRLELDMEGYQQR---ALRLTDAQKVWQDKLQA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY F+ +D +R P +L+ + F++++L EL+F Y
Sbjct: 342 IYGREDFTASEDPEQQLYAGFLGDRDRRLCEQVRMADPLQLTQERWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TL+ +E RW+
Sbjct: 402 RARNFPDTLNPEEHGRWR 419
>gi|253989171|ref|YP_003040527.1| exodeoxyribonuclease i (exonuclease i) (dn
deoxyribophosphodiesterase) [Photorhabdus asymbiotica]
gi|253780621|emb|CAQ83783.1| exodeoxyribonuclease i (exonuclease i) (dn
deoxyribophosphodiesterase) [Photorhabdus asymbiotica]
Length = 476
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 200/365 (54%), Gaps = 11/365 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PR+F++ LR K+ + I P +P +++
Sbjct: 174 VEHSHAHDAMSDVYATIAMAKLLKKAQPRMFDYFFQLRNKQKISNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S SL+ P+ HP+N+N +I +L D L D + +R+ L + + D
Sbjct: 234 MFGAARSNTSLVAPLAWHPINRNAVIMCDLAGDISPLLELDADALRERLYTRHDELLPDQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ ++H+N+ PI+ + L + R D + KN+ + + NN I +K+
Sbjct: 294 PPAPVKLVHINKCPIIAPD-NTLRAEDAERLGLDRDHCEKNL---AILRNNPQIREKVVE 349
Query: 238 DYKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ E N+D +LY+ F S D + I+R P+ L ++ F++ +++ L+F
Sbjct: 350 LFAQAEPFPESDNVDAKLYDGFFSDADKTAMNIIRETLPQNLPALDLTFQDPRIKTLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
YRARN+ TL+Y E +RW ++R K + Y +F +E + ++NE + L
Sbjct: 410 YRARNYPSTLTYDEQQRWLRHRQDVLTQDKLSEY---IFIIEQLFIEHQSNEEKCRQLKT 466
Query: 357 LLMYG 361
L+ Y
Sbjct: 467 LMEYA 471
>gi|302188463|ref|ZP_07265136.1| exonuclease I [Pseudomonas syringae pv. syringae 642]
Length = 476
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 196/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEDAEILKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSERREVWHDKLAT 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ F+ +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFAASEDPEQQLYDGFMGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
RARNF +TLS +E RW+ + R + N L++ +E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAALIE 447
>gi|374336115|ref|YP_005092802.1| exodeoxyribonuclease I [Oceanimonas sp. GK1]
gi|372985802|gb|AEY02052.1| exodeoxyribonuclease I [Oceanimonas sp. GK1]
Length = 471
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 200/368 (54%), Gaps = 15/368 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+ SRWDL++V++AFY L P GI WP +G+PSF+LE L+ N +
Sbjct: 114 LYRNFHDPYAWSWQQGNSRWDLLDVVRAFYALRPEGIQWPEDEDGRPSFRLERLTQANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDAL+DVRAT+ LARL++ PRLF+++ LR+K V A I ++P +++ M
Sbjct: 174 DHGQAHDALADVRATIALARLLKQAQPRLFDYLFELRRKHKVKALIDIINSKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N N +I +L D + D + +R L KK+ E
Sbjct: 234 FSPWQGCASWVAPLAWHPENANAVICVDLAKDLSPLVELDADTLRQRLYTKKSELGELPP 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++H+N+ P V++ LS D K++ + + I +K+ Y
Sbjct: 294 VPLKLVHINKCP-VLAKAAALSEQRADELGIDRAQCRKSLDL---LRKHPEIREKVEEIY 349
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + + + ++D LY F S+ D +A++RS P+ L+ + F + +L EL+F YR
Sbjct: 350 QQDGGFEADDDVDTALYRGFFSEADKAAMALVRSSQPEALAELPLQFTDARLPELLFRYR 409
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILNA 356
ARN+ TLS +E +RW R + + + + +E L+ + + DT+ +L A
Sbjct: 410 ARNYPHTLSEQEWQRW------RLHCQDKLSAHAEAYMHRLEQLVVEHQDDDTRLALLQA 463
Query: 357 LLMYGKSI 364
+ Y +S+
Sbjct: 464 VARYVQSL 471
>gi|440722683|ref|ZP_20903059.1| exonuclease I [Pseudomonas syringae BRIP34876]
gi|440725747|ref|ZP_20906009.1| exonuclease I [Pseudomonas syringae BRIP34881]
gi|440360936|gb|ELP98187.1| exonuclease I [Pseudomonas syringae BRIP34876]
gi|440367890|gb|ELQ04936.1| exonuclease I [Pseudomonas syringae BRIP34881]
Length = 476
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 196/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-AAQLSERREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
RARNF +TLS +E RW+ + R + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAAWVE 447
>gi|443642519|ref|ZP_21126369.1| Exoribonuclease I [Pseudomonas syringae pv. syringae B64]
gi|443282536|gb|ELS41541.1| Exoribonuclease I [Pseudomonas syringae pv. syringae B64]
Length = 476
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 196/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-AAQLSERREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
RARNF +TLS +E RW+ + R + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAAWVE 447
>gi|270262717|ref|ZP_06190988.1| exonuclease I [Serratia odorifera 4Rx13]
gi|270043401|gb|EFA16494.1| exonuclease I [Serratia odorifera 4Rx13]
Length = 475
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 201/375 (53%), Gaps = 23/375 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R+ +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRSFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGIVWPENEDGFPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHEHAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDIAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L +++R+ L ++ D
Sbjct: 233 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSADELRERLYTRREDLAADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 293 SPVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LRQNPQVREKVVA 348
Query: 238 DYKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+ +D E ++D LY+ F S D + I++ P+ L ++ F + +++E
Sbjct: 349 LF----ADAEPFKAVDDVDARLYDGFFSDADKAAMRIIQQTKPQNLPALDLTFSDGRMKE 404
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHD 350
L+F +RARN+ TL E +RW ++R ++ + + L++ESL L + ++
Sbjct: 405 LLFRFRARNYPNTLDDAEQRRWLQHRQEALSAER-----VQSYVLQLESLYNLHEGDKEK 459
Query: 351 TKILNALLMYGKSIT 365
T +L AL YGK +
Sbjct: 460 TALLKALFEYGKELV 474
>gi|372269884|ref|ZP_09505932.1| exonuclease I [Marinobacterium stanieri S30]
Length = 484
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 199/369 (53%), Gaps = 10/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N CSRWD+I++++ L P GITWP +G PS +LE L+ N +
Sbjct: 114 LYRNFYDPYAREWQNGCSRWDIIDMMRLTRALRPDGITWPEYEDGTPSMRLEDLTQANGV 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +ARL++ P+LF+++++ R K+ V A++ +P +++
Sbjct: 174 DHGNAHDALSDVYATIAMARLVKERQPKLFDYVVNNRGKRAVQAQLDVARMKPVLHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ ++ +++ P+ HP N+N + W+L DP + ++R+ + + + D
Sbjct: 234 YPAEWGNAAIVAPVASHPTNRNSTLVWDLREDPTPLFELSVEQLRELIFTRHDQLPADAP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ + N+ PI I+ +L+ R K D + ++++ + N T + K+
Sbjct: 294 RIPLKQVLANKCPI-IAPAGMLTKVEADRLKIDGDICRQHLQL---LRNETGLAAKVADI 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + + D LY F S D + +R+ P+ L + F++ +LEE++ Y
Sbjct: 350 FSDKGFESDGDPDHMLYSGGFFSDHDRALIEQVRNTEPEGLFELELAFQDPRLEEMLLRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN--EHDTKILN 355
+ARNF TLS E++RW++YR + + Y+ E+ + +K + + D IL
Sbjct: 410 KARNFPHTLSEDEIQRWEEYRSRKLLQGEAGCYSFPQLSQELNEMAQKPDLSDRDRHILE 469
Query: 356 ALLMYGKSI 364
L +Y +SI
Sbjct: 470 ELALYAESI 478
>gi|333928192|ref|YP_004501771.1| exodeoxyribonuclease I [Serratia sp. AS12]
gi|333933145|ref|YP_004506723.1| exodeoxyribonuclease I [Serratia plymuthica AS9]
gi|386330016|ref|YP_006026186.1| Exodeoxyribonuclease I [Serratia sp. AS13]
gi|333474752|gb|AEF46462.1| Exodeoxyribonuclease I [Serratia plymuthica AS9]
gi|333492252|gb|AEF51414.1| Exodeoxyribonuclease I [Serratia sp. AS12]
gi|333962349|gb|AEG29122.1| Exodeoxyribonuclease I [Serratia sp. AS13]
Length = 475
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 201/375 (53%), Gaps = 23/375 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R+ +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRSFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGIVWPENEDGFPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHEHAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDIAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L +++R+ L ++ D
Sbjct: 233 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSADELRERLYTRREDLAADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 293 SPVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LRQNPQVREKVVA 348
Query: 238 DYKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+ +D E ++D LY+ F S D + I++ P+ L ++ F + +++E
Sbjct: 349 LF----ADAEPFKAVDDVDARLYDGFFSDADKAAMRIIQQTKPQNLPALDLTFSDGRMKE 404
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHD 350
L+F +RARN+ TL E +RW ++R ++ + + L++ESL L + ++
Sbjct: 405 LLFRFRARNYPNTLDDAEQRRWLQHRQEALSAER-----VQSYVLQLESLYNLHEGDKEK 459
Query: 351 TKILNALLMYGKSIT 365
T +L AL YGK +
Sbjct: 460 TALLKALFEYGKELV 474
>gi|418584047|ref|ZP_13148113.1| exonuclease I [Pseudomonas aeruginosa MPAO1/P1]
gi|418589579|ref|ZP_13153500.1| exonuclease I [Pseudomonas aeruginosa MPAO1/P2]
gi|421518868|ref|ZP_15965541.1| exonuclease I [Pseudomonas aeruginosa PAO579]
gi|375046526|gb|EHS39087.1| exonuclease I [Pseudomonas aeruginosa MPAO1/P1]
gi|375051435|gb|EHS43902.1| exonuclease I [Pseudomonas aeruginosa MPAO1/P2]
gi|404346273|gb|EJZ72623.1| exonuclease I [Pseudomonas aeruginosa PAO579]
Length = 478
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 205/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 227 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L+ C K A + + +W
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELDECQQK----AELLRQHQTVWADKLT 341
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 342 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 399 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 458
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 459 VLAAWRDYAAELRQR 473
>gi|398966954|ref|ZP_10681720.1| exonuclease I [Pseudomonas sp. GM30]
gi|398145265|gb|EJM34056.1| exonuclease I [Pseudomonas sp. GM30]
Length = 476
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 209/372 (56%), Gaps = 11/372 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++A Y L P G+ WP + GK + KLE L+ N++
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPEGLVWPTDDQGKVTLKLERLTAANHI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ Y+ ++ P+ HP N+N LI +L DP+ L D +R L +++ E
Sbjct: 227 FSAARHYVGVVLPLAWHPRNRNALIVCDLHLDPQGLLDLDAETLRRRLYTRRDDLAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+NR P V++ L VL ++ R D+ A + A + + +WK K+
Sbjct: 287 PVPLKLIHINRCP-VVAPLSVLRADDQQRLGLDM--ALYQAR-ALRLSDAQQVWKDKVAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ FI +D +R+ P +L+ ++ F++++L EL+F Y
Sbjct: 343 IYASEDFTPSEDPEQQLYDGFIGDRDRRLCEQVRTADPAQLAQEHWPFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF +TL+ +E +RW+ + R + N + F + + A ++LN
Sbjct: 403 RARNFPDTLNSEEQERWRIFCQQRLSEPQMGAPNTLQSFAEAAQQWVLSATPIQNQVLNE 462
Query: 357 LLMYGKSITQKI 368
Y +++ +++
Sbjct: 463 WQNYVQALRKRL 474
>gi|157375752|ref|YP_001474352.1| exonuclease I [Shewanella sediminis HAW-EB3]
gi|157318126|gb|ABV37224.1| Exodeoxyribonuclease I [Shewanella sediminis HAW-EB3]
Length = 470
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 204/365 (55%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N+L
Sbjct: 114 FYRNFYDPYAREWQQGNSRWDIIDLVRACYAFRPDGIEWPVKEDGSPSFKLEHLTQANDL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+LF++ +LR+K+ V I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIDMAKLIKQKQPKLFDYYFTLRRKQEVSKLIDVLNMQPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
SS H +++ P+ H NKN +I NL D + +++IR+ + ++ ED +
Sbjct: 234 ISSLHGCTTIIAPVAHHSTNKNAIICVNLAMDISPLIELSVDQIRERMYTRRADLAEDEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PIS+ IH+N+ P I++ K LS R D A + K + + + +K+
Sbjct: 294 PISVKQIHINKCPF-IASAKTLSDENAERLNIDKAFAREQFKL---LKQHPELREKLVAV 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + D +LY F S D K+ I+R SP+ L+ + F++ +L+E++F Y
Sbjct: 350 FDVEYESGSTDPDLQLYSGGFFSSADKEKMEIIRHTSPQNLAALELEFDDSRLKEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
R RN+ ET E RW+++ +R N + L++E+L+ + NE K+L
Sbjct: 410 RGRNYPETFDEMESMRWREFCQARL--------NDPDYMLKLENLMNETAQNEDKQKLLT 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|448243069|ref|YP_007407122.1| exonuclease I [Serratia marcescens WW4]
gi|445213433|gb|AGE19103.1| exonuclease I [Serratia marcescens WW4]
Length = 475
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 199/370 (53%), Gaps = 15/370 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPDGIVWPENEDGFPSFRLEHLTHANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHTQAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDVAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L ++R+ L +++ D
Sbjct: 233 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSAEQLRERLYTRRDDLAPDQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+PI ++H+N+ P++ +L N R D +N++ + + + +K+
Sbjct: 293 TPVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LKQHPEVREKVVA 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D LY+ F S D + I++ P+ L ++ F + +++EL+F
Sbjct: 349 LFAEAEPFKGSEDVDARLYDGFFSDADKAAMRIIQQTKPQNLPALDLAFSDGRMKELLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKIL 354
+RARN+ TL E +RW ++R ++ + + L++ESL L + ++ T +L
Sbjct: 409 FRARNYPNTLDDAEQRRWLQHRQETLSAER-----VQSYLLQLESLYNLHEGDKEKTALL 463
Query: 355 NALLMYGKSI 364
AL YGK +
Sbjct: 464 KALFDYGKEL 473
>gi|107100101|ref|ZP_01364019.1| hypothetical protein PaerPA_01001122 [Pseudomonas aeruginosa PACS2]
Length = 480
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 205/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L+ C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELDECQQK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNAAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|15599512|ref|NP_253006.1| exonuclease I [Pseudomonas aeruginosa PAO1]
gi|421155680|ref|ZP_15615146.1| exonuclease I [Pseudomonas aeruginosa ATCC 14886]
gi|9950540|gb|AAG07704.1|AE004848_3 exodeoxyribonuclease I [Pseudomonas aeruginosa PAO1]
gi|404519857|gb|EKA30566.1| exonuclease I [Pseudomonas aeruginosa ATCC 14886]
Length = 480
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 205/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L+ C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELDECQQK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|330811421|ref|YP_004355883.1| exodeoxyribonuclease I [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379529|gb|AEA70879.1| Exodeoxyribonuclease I [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 477
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 186/318 (58%), Gaps = 11/318 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDLVRAAYALRPQGIVWP-QEDGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K+ V+ +I + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIRQQQPRLYDWLFQLRSKQKVMDQIR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +YI ++ P+ HP N+N LI +L DP+ L +D +R L ++ E
Sbjct: 226 FSAARNYIGVVLPLAWHPKNRNALIVCDLHLDPQGLLDHDAESLRQRLYTRREELLEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ +IH+N+ P VI+ L VL + R + D+ + A + + +W+ K+
Sbjct: 286 PVPLKLIHINKCP-VIAPLSVLRAEDQQRLELDMEGYQQR---ALRLTDAQKVWQDKLQA 341
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY F+ +D +R P +L+ + F++++L EL+F Y
Sbjct: 342 IYGREDFTASEDPEQQLYAGFLGDRDRRLCEQVRMADPLQLTQERWPFDDERLPELLFRY 401
Query: 298 RARNFIETLSYKELKRWK 315
RARNF +TL+ +E RW+
Sbjct: 402 RARNFPDTLNPEEHGRWR 419
>gi|149376775|ref|ZP_01894532.1| Exonuclease I [Marinobacter algicola DG893]
gi|149358896|gb|EDM47363.1| Exonuclease I [Marinobacter algicola DG893]
Length = 481
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 199/371 (53%), Gaps = 11/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ Y L P GI WP K +G PSF+LE L+ N +
Sbjct: 110 LYRNLRDPYAREWQNGNSRWDIIDMVRLTYALRPEGIQWPKKEDGSPSFRLEELTVANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF F+L + K A + +P F+I+
Sbjct: 170 AHEAAHDAMSDVEATIAVAKLIKEKQPKLFEFVLQNKDKHSARAMLDTASMKPVFHISAK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +++ P+ HP NKN++I ++L DP + + +IR+ + + E
Sbjct: 230 YPATRGCCAMVAPLADHPTNKNLVIVYDLREDPSELIHATPEQIRERVFTSQAELGEGTS 289
Query: 181 --PISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P+ + LN+ P++ + LK LS + + D + +++ + + F
Sbjct: 290 RFPLKGVQLNKCPVLAPATMLKSLSGERLAELELDGDRLREHLTMLRKAPDLPARIAEAF 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + DL + DE+LY FI K D KL L + L FE+ +L+E++F
Sbjct: 350 --DQPHEGDL-TDPDEQLYAGGFIGKTDREKLNWLLQQPVETLGEQEVQFEDGRLQEMLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ TL +E++RW+++R R + K ++ F E++ L K +
Sbjct: 407 RYRARNYPSTLIGEEMERWEEFRSQRLMSPKKGWRSLEAFGRELQRLAADPELTPEKRHV 466
Query: 354 LNALLMYGKSI 364
L L +YG+S+
Sbjct: 467 LEELHLYGESL 477
>gi|386060467|ref|YP_005976989.1| exonuclease I [Pseudomonas aeruginosa M18]
gi|347306773|gb|AEO76887.1| exonuclease I [Pseudomonas aeruginosa M18]
Length = 478
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S+ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 227 FSAERHFLSVALPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L+ C K A + + +W
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELDECQQK----AELLRQHQTVWADKLT 341
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 342 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 399 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 458
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 459 VLAAWRDYAAELRQR 473
>gi|395794882|ref|ZP_10474197.1| exonuclease I [Pseudomonas sp. Ag1]
gi|421141170|ref|ZP_15601162.1| exonuclease I [Pseudomonas fluorescens BBc6R8]
gi|395340931|gb|EJF72757.1| exonuclease I [Pseudomonas sp. Ag1]
gi|404507684|gb|EKA21662.1| exonuclease I [Pseudomonas fluorescens BBc6R8]
Length = 475
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 198/347 (57%), Gaps = 17/347 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 109 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++ LR K+ V+ ++ + +P +I+
Sbjct: 168 DHGQAHDALSDVRATIALARLIREKQPKLYDWLFQLRSKQRVMDQVR--LLQPMVHISGR 225
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ Y+ ++ P+ HP N+N LI +L DP+ L D + +R L +++ E
Sbjct: 226 FSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDEDADTLRRRLYTRRDELAEGEL 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK-KIF 236
+P+ ++H+NR P V++ L VL R + D++ C + ++ + + +W+ K+
Sbjct: 286 PVPLKLLHINRCP-VVAPLSVLRPQDRERLQLDMDECDARALRLSDA----QELWRDKLA 340
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY+ FI +D +R P +L+ + F++++L EL+F
Sbjct: 341 AIYAEEDFAPSADPEQQLYDGFIGDRDRRLCEQVRVAEPAQLARQQWPFDDERLPELLFR 400
Query: 297 YRARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEI 339
YRARNF +TL+ +E +RW+ + R + N L LE+
Sbjct: 401 YRARNFPDTLNSEEQQRWRVFCQQRLSDPQWGAPNTLEGFKQACLEL 447
>gi|453064009|gb|EMF04983.1| exonuclease I [Serratia marcescens VGH107]
Length = 475
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 199/371 (53%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPDGIVWPENEDGFPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHTQAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDVAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L ++R+ L +++ D
Sbjct: 233 MFGAARGNTSWVSPLAWHPENKNAVIMCDLAGDMTPLLTLSAEQLRERLYTRRDDLAPDQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+PI ++H+N+ P++ +L N R D +N++ + + + +K+
Sbjct: 293 APVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LKQHPEVREKVVA 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D LY+ F S D + I++ P+ L ++ F + +++EL+F
Sbjct: 349 LFAEAEPFKGSEDVDARLYDGFFSDADKAAMRIIQQTKPQNLPALDLAFSDGRMKELLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKIL 354
+RARN+ TL E +RW ++R ++ + + L++ESL L + ++ T +L
Sbjct: 409 FRARNYPNTLDDAEQRRWLQHRQEALSAER-----VQSYLLQLESLYNLHEGDKEKTALL 463
Query: 355 NALLMYGKSIT 365
AL YGK +
Sbjct: 464 KALFDYGKELV 474
>gi|218893406|ref|YP_002442275.1| exonuclease I [Pseudomonas aeruginosa LESB58]
gi|218773634|emb|CAW29448.1| exodeoxyribonuclease I [Pseudomonas aeruginosa LESB58]
Length = 480
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S+ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVALPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L+ C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELDECQQK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|157962308|ref|YP_001502342.1| exonuclease I [Shewanella pealeana ATCC 700345]
gi|157847308|gb|ABV87807.1| Exodeoxyribonuclease I [Shewanella pealeana ATCC 700345]
Length = 470
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 205/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLE L+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPEKEDGSPSFKLEQLTVANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI++ P+LF++ SLR K+ V I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIDMAKLIKSVQPKLFDYYFSLRLKQQVSKLIDVLEMKPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S+ + +++ P+ H NKN +I NL D + + +IR+ + +++ D +
Sbjct: 234 ISALNGCTTIIAPVAYHSTNKNAVICVNLAMDVTPLIELSVEEIRERMYTRRSDLAPDEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI + IH+N+SP I+ L+ R FD A K + + + +K+
Sbjct: 294 PIGLKQIHINKSPF-IAAANTLTDENAARLDFDKAFARAQYK---KLKQHPELREKLVAV 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + ++ D+ LY F S D K+ I+R P+ L+ + F++++L E++F Y
Sbjct: 350 FDVEHEGKTVDPDQALYSGGFFSSADKAKIEIIRHTQPRNLAALELDFDDQRLSEMLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT--KILN 355
RARN+ ETL E RW+++ +R N + + +E+LL++ + ++ K+L
Sbjct: 410 RARNYPETLDDSEQYRWREFCQTRL--------NDPDYIIRLENLLEETEQDESKQKLLQ 461
Query: 356 ALLMY 360
AL Y
Sbjct: 462 ALCHY 466
>gi|421784562|ref|ZP_16221001.1| exodeoxyribonuclease I [Serratia plymuthica A30]
gi|407753404|gb|EKF63548.1| exodeoxyribonuclease I [Serratia plymuthica A30]
Length = 476
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 201/375 (53%), Gaps = 23/375 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R+ +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRSFHDPYAYSWQNGNSRWDLLDVMRACYALRPEGIVWPENEDGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 174 VEHEHAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L +++R+ L ++ D
Sbjct: 234 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSADELRERLYTRREDLAADQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SPVPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LRQNPQVREKVVA 349
Query: 238 DYKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+ +D E ++D LY+ F S D + I++ P+ L ++ F + +++E
Sbjct: 350 LF----ADAEPFKAVDDVDARLYDGFFSDADKAAMRIIQQTKPQNLPALDLTFSDGRMKE 405
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHD 350
L+F +RARN+ TL E +RW ++R ++ + + L++ESL L + ++
Sbjct: 406 LLFRFRARNYPNTLDDAEQRRWLQHRQEALSAER-----VQSYVLQLESLYNLHEGDKEK 460
Query: 351 TKILNALLMYGKSIT 365
T +L AL YGK +
Sbjct: 461 TALLKALFEYGKELV 475
>gi|296391019|ref|ZP_06880494.1| exonuclease I [Pseudomonas aeruginosa PAb1]
Length = 480
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVDERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|192360953|ref|YP_001983097.1| exonuclease I [Cellvibrio japonicus Ueda107]
gi|190687118|gb|ACE84796.1| exodeoxyribonuclease I [Cellvibrio japonicus Ueda107]
Length = 497
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 182/332 (54%), Gaps = 6/332 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDLI+V++ L P GI WP +G P FKLE L+ VN +
Sbjct: 114 LYRNFYDPYEREWRNGNSRWDLIDVLRMTRALRPEGIHWPDYEDGTPCFKLERLTEVNRI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ +ARL+++ P+L+++ LR K++ + I +P +I+
Sbjct: 174 SHEAAHDALSDVHATIAMARLLKSRQPKLYDYAFRLRDKRFAASLIDIDGQKPLLHISSR 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
F + +L+ P+ HP NKN +I +NL DP L ++++R L E +
Sbjct: 234 FPGQQGNAALVLPLAYHPANKNSVIAFNLAFDPSPLLNLPVDELRIRLFTASADLPEGVE 293
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN--TYIWKKIF 236
P+ IHLN++P++++ V L R + D+ ++++ + + + +K+
Sbjct: 294 RLPLKEIHLNKTPMLVTTAMV-DETLARRLQLDMAICEQHLRAWTQLTRTEREALAEKLD 352
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + +++LY F S D ++ +R++SP L+ + FE+ +L EL+F
Sbjct: 353 ELYSAQDFTGRTDPEQQLYAGFFSDADKRLMSRVRTLSPDALAKTEWTFEDSRLPELLFR 412
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
YRARNF E+L E +RW + R
Sbjct: 413 YRARNFPESLDPAEQQRWFDFCCGRLTRPDQG 444
>gi|344943501|ref|ZP_08782788.1| Exodeoxyribonuclease I [Methylobacter tundripaludum SV96]
gi|344260788|gb|EGW21060.1| Exodeoxyribonuclease I [Methylobacter tundripaludum SV96]
Length = 501
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 199/365 (54%), Gaps = 9/365 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWDLI+V++A L P GI WP G PSF+L+ L+ VNN+
Sbjct: 112 LYRNFYDPYAREWQNGNSRWDLIDVVRATRALRPDGIVWPVNEEGGPSFRLDQLTRVNNI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDALSDV ATL + +L++ P+L+ F+L R K L + +P +++
Sbjct: 172 AHEAAHDALSDVYATLAITKLVKQAQPKLYQFLLRHRVKGEALNLLQLGSFKPVVHVSGK 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + ++++ PIC HP N N +I ++L DP+ L + +I+ + E
Sbjct: 232 YPAVKNCLAVVLPICKHPTNANGIIVYDLSVDPEPMLGLAVEEIQQRIFTATADLPEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +H+N+ P V++ + V+ R + DL NI + + + +F
Sbjct: 292 RIPLKTVHINKCP-VLAPVSVIRPEDAQRLEIDLALCHANIDKIKAAVGLSENLAAVFSG 350
Query: 239 --YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + +SD +L I F S+ D ++ +RSM P++L+ F F + +L E++F
Sbjct: 351 QAYVVQDSDPDLEI---YSGGFFSENDKKQMIKIRSMQPEQLTKSVFKFTDSRLSEMLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
YRARN+ ETL+ EL+RW ++ ++R ++ + Y + L + +TKI++A
Sbjct: 408 YRARNYPETLNTDELRRWNEFCVNRLTGRQAGGGIVLDDYFSRLAELSRDENKNTKIIDA 467
Query: 357 LLMYG 361
L Y
Sbjct: 468 LEDYA 472
>gi|313106840|ref|ZP_07793049.1| exodeoxyribonuclease I [Pseudomonas aeruginosa 39016]
gi|386064240|ref|YP_005979544.1| exonuclease I [Pseudomonas aeruginosa NCGM2.S1]
gi|416857472|ref|ZP_11912764.1| exonuclease I [Pseudomonas aeruginosa 138244]
gi|424944921|ref|ZP_18360684.1| exodeoxyribonuclease I [Pseudomonas aeruginosa NCMG1179]
gi|451986860|ref|ZP_21935027.1| Exodeoxyribonuclease I [Pseudomonas aeruginosa 18A]
gi|310879551|gb|EFQ38145.1| exodeoxyribonuclease I [Pseudomonas aeruginosa 39016]
gi|334840633|gb|EGM19282.1| exonuclease I [Pseudomonas aeruginosa 138244]
gi|346061367|dbj|GAA21250.1| exodeoxyribonuclease I [Pseudomonas aeruginosa NCMG1179]
gi|348032799|dbj|BAK88159.1| exonuclease I [Pseudomonas aeruginosa NCGM2.S1]
gi|451755537|emb|CCQ87550.1| Exodeoxyribonuclease I [Pseudomonas aeruginosa 18A]
gi|453046348|gb|EME94065.1| exonuclease I [Pseudomonas aeruginosa PA21_ST175]
Length = 478
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 227 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 341
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 342 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 399 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 458
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 459 VLAAWRDYAAELRQR 473
>gi|416876102|ref|ZP_11919053.1| exonuclease I [Pseudomonas aeruginosa 152504]
gi|334841228|gb|EGM19862.1| exonuclease I [Pseudomonas aeruginosa 152504]
Length = 478
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 227 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 341
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 342 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 399 FFRYRARNFPETLNVDERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 458
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 459 VLAAWRDYAAELRQR 473
>gi|254239017|ref|ZP_04932340.1| exodeoxyribonuclease I [Pseudomonas aeruginosa C3719]
gi|355650493|ref|ZP_09056128.1| hypothetical protein HMPREF1030_05214 [Pseudomonas sp. 2_1_26]
gi|420141452|ref|ZP_14649131.1| exonuclease I [Pseudomonas aeruginosa CIG1]
gi|421162655|ref|ZP_15621466.1| exonuclease I [Pseudomonas aeruginosa ATCC 25324]
gi|421170061|ref|ZP_15628037.1| exonuclease I [Pseudomonas aeruginosa ATCC 700888]
gi|421182375|ref|ZP_15639851.1| exonuclease I [Pseudomonas aeruginosa E2]
gi|126170948|gb|EAZ56459.1| exodeoxyribonuclease I [Pseudomonas aeruginosa C3719]
gi|354826773|gb|EHF10979.1| hypothetical protein HMPREF1030_05214 [Pseudomonas sp. 2_1_26]
gi|403245786|gb|EJY59563.1| exonuclease I [Pseudomonas aeruginosa CIG1]
gi|404524462|gb|EKA34805.1| exonuclease I [Pseudomonas aeruginosa ATCC 700888]
gi|404533511|gb|EKA43327.1| exonuclease I [Pseudomonas aeruginosa ATCC 25324]
gi|404541962|gb|EKA51301.1| exonuclease I [Pseudomonas aeruginosa E2]
Length = 480
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|116052350|ref|YP_792661.1| exonuclease I [Pseudomonas aeruginosa UCBPP-PA14]
gi|421176458|ref|ZP_15634121.1| exonuclease I [Pseudomonas aeruginosa CI27]
gi|115587571|gb|ABJ13586.1| exodeoxyribonuclease I [Pseudomonas aeruginosa UCBPP-PA14]
gi|404530792|gb|EKA40775.1| exonuclease I [Pseudomonas aeruginosa CI27]
Length = 480
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 203/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL R +L C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRGEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|332306455|ref|YP_004434306.1| Exodeoxyribonuclease I [Glaciecola sp. 4H-3-7+YE-5]
gi|332173784|gb|AEE23038.1| Exodeoxyribonuclease I [Glaciecola sp. 4H-3-7+YE-5]
Length = 476
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 202/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I+V++A Y L P GI WP K +G PSFKLE LS NN+
Sbjct: 111 LYRNFYDPYEREWRNGNSRWDIIDVVRACYALRPDGIEWPLKEDGSPSFKLEDLSKANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+G+A+L++ P+L++++ +LR KK V+A I P +I+
Sbjct: 171 EHSAAHDAMSDVYATIGVAKLVKTAQPKLYDYLFNLRLKKNVIALIDTQAHTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + PI HP NKN I NL D + L + +I L N +E
Sbjct: 231 LPAINGCCTWVAPIAQHPTNKNAFIMLNLSLDIQPLLALSVEEIIQKLYTASNMLEEGEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+SP V++ K L+ R D +N++ + + + +K+
Sbjct: 291 RLPIKLVHVNKSP-VLAPAKTLNEENAARLGIDRQACLQNLQL---LKQHPELVEKLIKV 346
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N + D LY F S KD + +R +P++L+++ FE+ +L+ L+F Y
Sbjct: 347 HHSNTEHVPQEADHSLYSGGFFSPKDRALMDQVRQSTPEQLADLALPFEDSRLDNLLFYY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK---ANEHDTKIL 354
+ARNF +L+ +E++RW+ +R R + + Y++ LL + +N IL
Sbjct: 407 KARNFPTSLNDQEMQRWQNHRKFRLLDDSSPSSITMSDYVQTLELLCEQYHSNSDKLAIL 466
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 467 KALYTYAEQL 476
>gi|392985877|ref|YP_006484464.1| exonuclease I [Pseudomonas aeruginosa DK2]
gi|419751860|ref|ZP_14278269.1| exonuclease I [Pseudomonas aeruginosa PADK2_CF510]
gi|384401437|gb|EIE47791.1| exonuclease I [Pseudomonas aeruginosa PADK2_CF510]
gi|392321382|gb|AFM66762.1| exonuclease I [Pseudomonas aeruginosa DK2]
Length = 478
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 203/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S+ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 227 FSAERHFLSVALPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 287 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 341
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 342 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 399 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 458
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 459 VLAAWRDYAAELRQR 473
>gi|254244874|ref|ZP_04938196.1| exodeoxyribonuclease I [Pseudomonas aeruginosa 2192]
gi|126198252|gb|EAZ62315.1| exodeoxyribonuclease I [Pseudomonas aeruginosa 2192]
Length = 480
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 204/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S KLE L+ N L
Sbjct: 112 LYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWP-QLDGRLSLKLEMLTAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR PRL++++ LR K VL ++ + +P +++
Sbjct: 171 EHGQAHDALSDVRATIALARLIRQRQPRLYDYLYQLRSKHKVLDQVR--LLQPLVHVSGR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S++ P+ HP N+N LI +L DP L +R L +++ E
Sbjct: 229 FSAERHFLSVVLPLVWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGEL 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCAFKNIKCASSILNNTYIWK---- 233
+P+ I +NR P V++ L VL + R +L C K A + + +W
Sbjct: 289 PVPLKQIQVNRCP-VVAPLSVLRAEDRQRTGIELEECQRK----AELLRQHQTVWADKLT 343
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + + SD + +++LY+ FI +D LR P++L+ + F++ +L+EL
Sbjct: 344 ALYGEESFSASD---DPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTK 352
F YRARNF ETL+ E ++W+ + +R +++ N + F +E+ ++
Sbjct: 401 FFRYRARNFPETLNVAERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPA 460
Query: 353 ILNALLMYGKSITQK 367
+L A Y + Q+
Sbjct: 461 VLAAWRDYAAELRQR 475
>gi|422637736|ref|ZP_16701168.1| exonuclease I [Pseudomonas syringae Cit 7]
gi|330950132|gb|EGH50392.1| exonuclease I [Pseudomonas syringae Cit 7]
Length = 476
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 194/338 (57%), Gaps = 15/338 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L+++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYFFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEDAEILKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-ATQLSEHREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ F+ +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFAASEDPEQQLYDGFMGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYN 331
RARNF +TLS +E RW+ + R + N L++
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHD 440
>gi|410641208|ref|ZP_11351731.1| exodeoxyribonuclease I [Glaciecola chathamensis S18K6]
gi|410646436|ref|ZP_11356887.1| exodeoxyribonuclease I [Glaciecola agarilytica NO2]
gi|410134042|dbj|GAC05286.1| exodeoxyribonuclease I [Glaciecola agarilytica NO2]
gi|410139335|dbj|GAC09918.1| exodeoxyribonuclease I [Glaciecola chathamensis S18K6]
Length = 476
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 201/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I+V++A Y L P GI WP K +G PSFKLE LS NN+
Sbjct: 111 LYRNFYDPYEREWRNGNSRWDIIDVVRACYALRPDGIEWPLKEDGSPSFKLEDLSKANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+G+A+L++ P+L++++ +LR KK V+A I P +I+
Sbjct: 171 EHSAAHDAMSDVHATIGVAKLVKTAQPKLYDYLFNLRLKKNVIALIDTQAHTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + PI HP NKN I NL D + L + +I L N E
Sbjct: 231 LPAINGCCTWVAPIAQHPTNKNAFIMLNLSLDIQPLLDLSVEEIIQKLYTPSNMLDEGEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+SP V++ K L+ R D +N++ + + + +K+
Sbjct: 291 RLPIKLVHVNKSP-VLAPAKTLNEENAARLGIDRQACLQNLQL---LKQHPELVEKLIKV 346
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N + D LY F S KD + +R +P++L+++ FE+ +L+ L+F Y
Sbjct: 347 HHSNTEHVPQEADHSLYSGGFFSPKDRALMDQVRQSTPEQLADLALPFEDSRLDNLLFYY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK---ANEHDTKIL 354
+ARNF +L+ +E++RW+ +R R + + Y++ LL + +N IL
Sbjct: 407 KARNFPTSLNDQEMQRWQNHRKFRLLDDSSPSSITMSDYVQTLELLCEQYHSNSDKLAIL 466
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 467 KALYTYAEQL 476
>gi|422017688|ref|ZP_16364251.1| exonuclease I [Providencia alcalifaciens Dmel2]
gi|414105281|gb|EKT66840.1| exonuclease I [Providencia alcalifaciens Dmel2]
Length = 475
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 204/369 (55%), Gaps = 20/369 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP ++G PS +LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQQGNSRWDLLDALRACFALRPEGINWPENDDGLPSLRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+L++ PR+F++ LR K V I P +++
Sbjct: 174 VSHENAHDAMSDVLATINMAKLLKQAQPRMFDYFYQLRNKNKVNQLIDIVDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SY+SL+ P+ HP NKN +I +L D L +++R+ L K +D
Sbjct: 234 MFGALRSYVSLVTPLAWHPENKNAVIMCDLSGDMSPLLTLSADELRERLYTPKAELGDDL 293
Query: 180 -IPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+PI ++H+N+ PI+ I+ L+ + + R D + +N++ + N + K+
Sbjct: 294 PVPIKLVHINKCPILAPINTLRTVDAE---RTGLDRDLCMRNLEL---LRKNPDVRNKLI 347
Query: 237 LDYKINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + E N +D ++YN F S D + I+R +P+ L ++ FE+K+++EL F
Sbjct: 348 ELFSVGQQFEESNDVDSQIYNGFFSPSDRSTMDIIRETAPQNLPALDLSFEDKRMKELFF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--- 352
Y+ARN+ TLSY E +RW ++R R Y + L + YL+ LL + D K
Sbjct: 408 RYKARNYPSTLSYDEQQRWLQHR--RDYFTEARLTD----YLQQIQLLMDVHHEDEKRCQ 461
Query: 353 ILNALLMYG 361
L AL+ Y
Sbjct: 462 QLKALVNYA 470
>gi|212712795|ref|ZP_03320923.1| hypothetical protein PROVALCAL_03892 [Providencia alcalifaciens DSM
30120]
gi|212684487|gb|EEB44015.1| hypothetical protein PROVALCAL_03892 [Providencia alcalifaciens DSM
30120]
Length = 479
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 204/369 (55%), Gaps = 20/369 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP ++G PS +LEHL+ N
Sbjct: 118 IFYRNFYDPYAYSWQQGNSRWDLLDALRACFALRPEGINWPENDDGLPSLRLEHLTKANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+L++ PR+F++ LR K V I P +++
Sbjct: 178 VSHENAHDAMSDVLATINMAKLLKQAQPRMFDYFYQLRNKNKVNQLIDIVDMTPLVHVSG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SY+SL+ P+ HP NKN +I +L D L +++R+ L K +D
Sbjct: 238 MFGALRSYVSLVTPLAWHPENKNAVIMCDLSGDMSPLLTLSADELRERLYTPKAELGDDL 297
Query: 180 -IPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+PI ++H+N+ PI+ I+ L+ + + R D + +N++ + N + K+
Sbjct: 298 PVPIKLVHINKCPILAPINTLRTVDAE---RTGLDRDLCMRNLEL---LRKNPDVRNKLI 351
Query: 237 LDYKINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + E N +D ++YN F S D + I+R +P+ L ++ FE+K+++EL F
Sbjct: 352 ELFSVGQQFEESNDVDSQIYNGFFSPSDRSTMDIIRETAPQNLPALDLSFEDKRMKELFF 411
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--- 352
Y+ARN+ TLSY E +RW ++R R Y + L + YL+ LL + D K
Sbjct: 412 RYKARNYPSTLSYDEQQRWLQHR--RDYFTEARLTD----YLQQIQLLMGVHHEDEKRCQ 465
Query: 353 ILNALLMYG 361
L AL+ Y
Sbjct: 466 QLKALVNYA 474
>gi|357417363|ref|YP_004930383.1| exonuclease I [Pseudoxanthomonas spadix BD-a59]
gi|355334941|gb|AER56342.1| exonuclease I [Pseudoxanthomonas spadix BD-a59]
Length = 480
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 202/373 (54%), Gaps = 16/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V + F+ L P G+ WP + +G PSF+LEHL+ N++
Sbjct: 110 LFRNFFDPYEREWRGGNSRWDLLDVARLFHALRPQGMQWPRREDGTPSFRLEHLALANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+AR +R+ PRL+++ L LR K++ + + P +++
Sbjct: 170 RIGDAHEALSDVRATVGIARAMRSAQPRLWDYALQLRNKRFAASLLDTVAMTPLLHVSTR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLN-DINKIRDYLCFKKNSFKEDI 180
+ + + + PI HP + +I +L D + LL+ D I D L + +D+
Sbjct: 230 YPASRLCAAPVLPIARHPRIDSRIIVLDLEGDAAQALLDLDPQDIADRLYTPRADLPQDV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFD-LNCAFKNIKCASSIL--NNTYIWKK 234
P+ +HLNR P ++ N + + F+ L ++ + +L + + +K
Sbjct: 290 RRVPLKEVHLNRCPALVP------WNYLRQADFERLGIDPDPVQAQAGLLRAHGPLVAEK 343
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ + + + D LY+ F+++ D +LA +R+ P++L + F F++ +LE L+
Sbjct: 344 VRQVFASERAQEPSDPDAALYDGFLAEGDRRRLAEVRATPPQQLGSRAFGFKDPRLEVLL 403
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
F YRARN+ +TL E RW +R R + + Y+++ F+ EI SL E +
Sbjct: 404 FRYRARNWPDTLDAMERGRWDDHRRQRLAAGTRTSEYSLDSFFEEIASLRAAHAEDGARQ 463
Query: 353 -ILNALLMYGKSI 364
+L+ L +G+ +
Sbjct: 464 VLLDQLEAWGRQL 476
>gi|410664159|ref|YP_006916530.1| exonuclease I [Simiduia agarivorans SA1 = DSM 21679]
gi|409026516|gb|AFU98800.1| exonuclease I [Simiduia agarivorans SA1 = DSM 21679]
Length = 474
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 199/372 (53%), Gaps = 16/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY EW + SRWDLI++ + Y L P GI WP + +G PSFKLEHLS N
Sbjct: 109 LYRNFYDPYRTEWADGNSRWDLIDLARMTYALRPDGIEWPLREDGSPSFKLEHLSAANGF 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LARLIR P+L+++ +LR K++ W P + +
Sbjct: 169 EHANAHDALSDVYATIDLARLIRARQPKLYDYAFALRDKRHAGQMFDWVKRTPVLHTSSR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK---- 177
F + +L+ P+ HP NKN +I ++L DP L D +R+ L +
Sbjct: 229 FPAARGCTALVMPLATHPTNKNAVIVYDLSVDPSALLTLDAETVRERLYTAGDVLAAQGL 288
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKK 234
+ I + ++HLN+SP+ +S + VL+ L R + D+ A +K + A ++ + K
Sbjct: 289 DSIALKLVHLNKSPM-LSPVSVLTPALEQRLQLDMATARQHWKQLATADAVALQAKL-AK 346
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++ + + + +++LY FI +D +A + ++ P +L++++ F++++L +L+
Sbjct: 347 VYGESGFAEPN---DPEQQLYGGFIPDQDKNAMARVHTVEPHQLASIH--FDDRRLSKLL 401
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-- 352
YRAR+F ETL+ E W+++R R N + Y E + L+ + +
Sbjct: 402 SRYRARHFPETLTPDEQLAWEEWRYERLTNPDAGASIVMEDYFERLAQLRDDPAYADRRA 461
Query: 353 ILNALLMYGKSI 364
+L+AL +G +
Sbjct: 462 LLDALEAWGDGL 473
>gi|378580216|ref|ZP_09828874.1| exonuclease I [Pantoea stewartii subsp. stewartii DC283]
gi|377817025|gb|EHU00123.1| exonuclease I [Pantoea stewartii subsp. stewartii DC283]
Length = 475
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 198/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV TL +ARL++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VAHENAHDAMSDVYVTLAMARLVKEKQPKLFEFLFTHRNKNKLMTLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N LI +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSWVVPLAWHPDNRNALIVVDLAGDIAPLLTLDADSLRERLYTPKSELGDQP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ +++ + + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAPANTLRPEDAGRLGIDRQFCLDNL---ATLRQHPDVREKLVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + ++D +LY+ F S D + I+R +P L +N F++ ++E+L+F Y
Sbjct: 350 FAEAEPFAPSEDVDTQLYDGFFSDADRAGMNIIRQTAPANLPALNLTFDSPRVEKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R +K + F +E+ESL L + + L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVLNPEK-----VQAFLMELESLASLHEGDAEKLSQLK 464
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 465 ALYRYAQEL 473
>gi|167623714|ref|YP_001674008.1| exonuclease I [Shewanella halifaxensis HAW-EB4]
gi|167353736|gb|ABZ76349.1| Exodeoxyribonuclease I [Shewanella halifaxensis HAW-EB4]
Length = 493
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 205/365 (56%), Gaps = 18/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N +RWD+I++++A Y P GI WP K +G PSFKLE L+ N L
Sbjct: 137 FYRNFIDPYAREWQNGNTRWDIIDLVRACYAFRPEGINWPEKEDGSPSFKLEQLTVANGL 196
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+LF++ SLR+K+ V I +P +++
Sbjct: 197 SHEKAHDAMSDVYATIDMAKLIKTVQPKLFDYYFSLRQKQQVSKLIDVLEMKPLVHVSSK 256
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
S+ + +++ P+ H NKN +I NL D + + +IR+ + +++ D +
Sbjct: 257 ISALNGCTTIIAPVAYHSTNKNAVICVNLAMDVTPLIELSVEEIRERMYTRRSDLAPDEL 316
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI + +H+N+SP I+ L+ R FD A + + + + + +K+
Sbjct: 317 PIGLKQVHINKSPF-IAAANTLTDENAARLDFDKAFAREQFR---KLKQHPELREKLVAV 372
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + ++ D+ LY F S D K+ I+R+ P L+ + F++ +L E++F Y
Sbjct: 373 FDVEHDSKAVDPDQALYSGGFFSSADKAKIEIIRNTKPSNLAALELDFDDSRLAEMLFRY 432
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT--KILN 355
RARN+ ETL E RW+++ +R N + + +E+LL++ + ++ K+L
Sbjct: 433 RARNYPETLDDSEQYRWREFCQTRL--------NDPDYIIRLENLLEETEQDESKQKLLQ 484
Query: 356 ALLMY 360
AL Y
Sbjct: 485 ALCHY 489
>gi|290475866|ref|YP_003468758.1| exonuclease I [Xenorhabdus bovienii SS-2004]
gi|289175191|emb|CBJ81994.1| exonuclease I, 3'--> 5'-specific; deoxyribophosphodiesterase
[Xenorhabdus bovienii SS-2004]
Length = 475
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 204/372 (54%), Gaps = 25/372 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLE+L+ N
Sbjct: 113 IFYRNFYDPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENEDGLPSFKLENLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+ ++ PRLF++ LR K+ V +I P +P +++
Sbjct: 173 VEHTQAHDAMSDVYATIAMAKRVKKAQPRLFDYFFQLRNKQKVSNQIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S ISL+ P+ HP N+N +I +L D L +++R+ L ++N +
Sbjct: 233 MFGTLRSNISLIAPLAWHPTNRNAVIMCDLAGDISPLLELSADELRERLYTRRNELQPGQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+PI ++H+N+ PI I+ L + R + + KN+ S N I +K+
Sbjct: 293 APVPIKLMHINKCPI-IAPENTLRTEDAERVGLNRDQCAKNLAILRS---NPQIREKVVE 348
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD N+D +LY+ F S D + I+R +PK L ++ F++ +++ L
Sbjct: 349 LFSQPEEFPESD---NVDTKLYSGFFSDADKTAMEIIRETAPKNLPALDLTFQDPRIKTL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLK--KANEH 349
+F YRARN+ TL+Y E +RW Y+++ L NI+ + IE L +++E
Sbjct: 406 LFRYRARNYPATLNYDEQQRW-------LYHRREILTQENISQYLAAIEQLFVEYQSDEE 458
Query: 350 DTKILNALLMYG 361
+ L AL+ Y
Sbjct: 459 KCRQLKALVDYA 470
>gi|251792518|ref|YP_003007244.1| exonuclease I [Aggregatibacter aphrophilus NJ8700]
gi|247533911|gb|ACS97157.1| exodeoxyribonuclease I [Aggregatibacter aphrophilus NJ8700]
Length = 464
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 196/369 (53%), Gaps = 22/369 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P G+ WP + G PSF+LE L+ N +
Sbjct: 103 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGVEWPLDDEGMPSFRLEKLTEANGI 162
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK + I P +++ M
Sbjct: 163 EHTNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEIEKLINTAEMTPLVHVSGM 222
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +L+ P+ HP NKN +I +L + L ++R+ L KK + E
Sbjct: 223 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLEAGV 282
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ +IH+N+ PIV +LS N R D +N +L + I +K+
Sbjct: 283 LLVPLKLIHINKCPIVAPEKTLLSQNAE-RLGIDRELCAQN---QQRLLASKDIRQKVMD 338
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
D + SD N++ ELYN F S D +AILR++ P+KL+ N F++ ++ +L
Sbjct: 339 IFQQDREFEASD---NVETELYNGFFSDADKNNMAILRTLEPEKLAEHNLRFQDPRIPQL 395
Query: 294 IFLYRARNFIETLSYKELKRWKKY-------RISRFYNKKNNLYNINMFYLEIESLLKKA 346
+F YRAR+F TL+ E +W+KY I RF L N E +LL+K
Sbjct: 396 LFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEILRFEQSLQELAAQNEHNEENLTLLQKV 455
Query: 347 NEHDTKILN 355
E+ KI++
Sbjct: 456 YEYGNKIIS 464
>gi|386288507|ref|ZP_10065648.1| exonuclease I [gamma proteobacterium BDW918]
gi|385278523|gb|EIF42494.1| exonuclease I [gamma proteobacterium BDW918]
Length = 479
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 197/371 (53%), Gaps = 9/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWDLI+V + L P GI WP + +G PSF+LE LS N L
Sbjct: 111 LYRNFFDPYAREWQNGNSRWDLIDVARLCRALRPEGIEWPVREDGTPSFRLEELSAANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ LA+L++ P+LF++ LSLR K+ V A + P +++
Sbjct: 171 SHESAHDALSDVYATIDLAKLLKARQPKLFDYALSLRDKRTVAAMLDTVTQVPVLHVSGR 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +LM P+ +HP NKN +I ++L DP+ + + +I + E
Sbjct: 231 LPASKFCSALMMPLALHPDNKNSVIVYDLSVDPQPLIDLSVEEISARVFSATADLPEGAE 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IH+NR+PIV + K+L + R + D+ +N + + T +K+F
Sbjct: 291 RIPLKEIHINRAPIV-ATAKLLDDAVCERLQLDMAQCRRNWQRIRKSGDLTAKLQKLFGG 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
K S + D LY F S +D + +RS P+ L+ +F F +++L EL++ Y
Sbjct: 350 RKFAESS---DPDVMLYGGGFFSGEDRHLMDSVRSSDPESLAGQSFPFRDQRLPELLWRY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL-LKKANEHDTKILNA 356
RARN+ TL+ E ++W ++ R + F + L L++ + D ILN
Sbjct: 407 RARNYPATLTGAERQQWLEFCRRRLRQPEPGQLGFAEFRQRLGELALERNSSTDAMILNE 466
Query: 357 LLMYGKSITQK 367
L Y ++ Q+
Sbjct: 467 LSEYADALEQE 477
>gi|440758354|ref|ZP_20937524.1| Exodeoxyribonuclease I [Pantoea agglomerans 299R]
gi|436427963|gb|ELP25630.1| Exodeoxyribonuclease I [Pantoea agglomerans 299R]
Length = 475
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 194/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWAWQNGNSRWDLLDVMRACYALRPDGIIWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D++ +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLQLDVDTLRERLFTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 PVPVKLVHINKCP-VLAPASTLRPEDAARLGIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLSFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R N ++ F E+E L L +A+ L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVL-----NAERVSAFMQELEGLANLHEADAEKVGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|402305279|ref|ZP_10824338.1| exodeoxyribonuclease I [Haemophilus sputorum HK 2154]
gi|400376392|gb|EJP29279.1| exodeoxyribonuclease I [Haemophilus sputorum HK 2154]
Length = 513
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 199/371 (53%), Gaps = 15/371 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WK SRWDL++V++A Y L P GI W + NG PSFKL+ L+ N +
Sbjct: 111 FFRNFFDPYEYSWKQGNSRWDLLDVVRACYALRPEGIEWVHDENGLPSFKLDQLTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F + R KK I P +++ M
Sbjct: 171 AHENAHDAMSDVYATIAMAKLIQTKQPKLFDFFFTHRGKKETEKLIDTAEMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S IS + P+ HP N+N +I +L D + L + +R+ L K+ + E
Sbjct: 231 FGNARSNISWIAPLAWHPTNQNEVICCDLTGDIQPLLTESADVLRERLYTKREALAEGVN 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF-L 237
+P+ +H+N+ PI ++ KVL R D N+K + N + I +K+ +
Sbjct: 291 PVPLKGVHINKCPI-LAPAKVLLPENAARLGIDREACLANLKQLKA--NKSLIREKVTDI 347
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N++ LY F S D +AILRS+ P++L++ F ++++E L+F Y
Sbjct: 348 FTQTREFSASENVETTLYQGFFSAADKNNMAILRSLKPEELAHHGLKFADERVEPLLFHY 407
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILN 355
RAR+F ETLS E +W+KY + K + N + +L + E K +L
Sbjct: 408 RARHFPETLSRAEQIKWQKYCHQKIDEKTESFTN------SLAALFTQYQEQPEKLALLE 461
Query: 356 ALLMYGKSITQ 366
+L Y + +T+
Sbjct: 462 SLAAYAEQLTE 472
>gi|91793639|ref|YP_563290.1| exonuclease I [Shewanella denitrificans OS217]
gi|91715641|gb|ABE55567.1| Exodeoxyribonuclease I subunit C [Shewanella denitrificans OS217]
Length = 470
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 207/374 (55%), Gaps = 28/374 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G SFKLE L+ N L
Sbjct: 114 FYRNFIDPYAREWQNGNSRWDIIDLVRACYAFRPDGINWPRKEDGTVSFKLELLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+L+++ SLR+K+ V A+I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIAMAKLIKQVQPKLYDYYFSLRRKQAVAAQIDVLKMQPLVHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ ++ +L+ P+ HP NKN ++ NL D L +I + + D
Sbjct: 234 ISALNACTTLIAPMAYHPTNKNAVLCVNLAMDISPLLELSAEEIAARMYTSRADLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSI---LNNTYIW 232
IP+ IHLN+ P + S K+L +L R FD A +K +K + L +
Sbjct: 294 PIPLKQIHLNKCPFIASP-KLLDDDLTSRLNFDKAFAREQYKRLKQHPELREKLVGVFEQ 352
Query: 233 KKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
K F N+SD +L + F S D K+ I+R P+ L+ ++ F++ ++ E
Sbjct: 353 TKEF-----NHSDPDLML---YGGGFFSHADKAKMDIIRQTQPQNLAALDLKFDDNRIAE 404
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHD 350
++F YR RN+ E L + E RW+++ SR + + +++E+LL+ + +EH
Sbjct: 405 MLFRYRGRNYPELLDHDESVRWREFCQSRLADAD--------YVIKLENLLEASAQDEHK 456
Query: 351 TKILNALLMYGKSI 364
K+L AL Y +++
Sbjct: 457 QKLLRALCQYLQAL 470
>gi|167035442|ref|YP_001670673.1| exonuclease I [Pseudomonas putida GB-1]
gi|166861930|gb|ABZ00338.1| Exodeoxyribonuclease I [Pseudomonas putida GB-1]
Length = 477
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 198/371 (53%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPDGIQWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L H+ L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHHETLPLLRESAEILRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VLAPLSVLRPADQQRLGLDLTLLQSR---GEQLANQQAQWQDKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS ++ F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSRGHWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +EL+RW + R + + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTSEELQRWYGFCQQRLSDPQWGAPNTLGDFEQARQQAWQGADEAGRRVLEA 462
Query: 357 LLMYGKSITQK 367
++ + + +
Sbjct: 463 WQVHARQLQAQ 473
>gi|390435102|ref|ZP_10223640.1| exonuclease I [Pantoea agglomerans IG1]
Length = 475
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWAWQNGNSRWDLLDVMRACYALRPEGINWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VSHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D + +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLQLDADTLRERLYTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 AVPVKLVHINKCP-VLAPASTLRPEDAARLNIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLSFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R N + F E+E+L L +A+ L
Sbjct: 410 RARNFPGTLDDTEQQRWLQHRREVL-----NAERVQAFMQELEALANLHEADAERVGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|253688149|ref|YP_003017339.1| Exodeoxyribonuclease I [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754727|gb|ACT12803.1| Exodeoxyribonuclease I [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 475
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 186/330 (56%), Gaps = 8/330 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++ ++A Y L P GI WP N+G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDALRACYALRPEGIIWPENNDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH++AHDA+SDV AT+ +A+L + P+LF ++ +LR K + A I P +P +++
Sbjct: 173 ISHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFTLRNKNKISALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ + D
Sbjct: 233 MFGAARSNTSWVVPLAWHPDNRNAVIMCDLAGDMTPLLELDSETLRERLYTRRDALEPDQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P V++ L R D N+ + NNT + +K+
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLSIDRQRCLDNLAL---LRNNTSVREKVVE 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D LY+ F D + + I++ +P+ L ++ F + +LE L+F
Sbjct: 349 LFAEAPAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK 326
YRARNF TL +E +RW ++R + F ++
Sbjct: 409 YRARNFPGTLDDREQQRWLQHRRAVFTPER 438
>gi|359299999|ref|ZP_09185838.1| exonuclease I [Haemophilus [parainfluenzae] CCUG 13788]
Length = 513
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 200/372 (53%), Gaps = 17/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WK SRWDL++V++A Y L P GI W + NG PSFKL+ L+ N +
Sbjct: 111 FFRNFFDPYEYSWKQGNSRWDLLDVVRACYALRPEGIEWVHDENGLPSFKLDQLTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F + R KK I P +++ M
Sbjct: 171 AHENAHDAMSDVYATIAMAKLIQTKQPKLFDFFFTHRGKKETEKLIDTAEMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S IS + P+ HP N+N +I +L D + L + +R+ L K+ + E
Sbjct: 231 FGNARSNISWIAPLAWHPTNQNEVICCDLTGDIQPLLTESADVLRERLYTKREALAEGVN 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +H+N+ PI ++ KVL R D N+K + N + I +K+ D
Sbjct: 291 PVPLKGVHINKCPI-LAPAKVLLPENAERLGIDREACLANLKQLKA--NKSLIREKV-TD 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + N++ LY F S D +AILRS+ P++L++ F ++++E L+F
Sbjct: 347 IFTQTREFSVSDNVETTLYQGFFSAADKNNMAILRSLKPEELAHHGLKFADERVEPLLFH 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
YRAR+F ETLS E +W+KY + K + F + +L + E K +L
Sbjct: 407 YRARHFPETLSRAEQIKWQKYCHQKIDEKTES------FASSLATLFTQYQEQPEKLALL 460
Query: 355 NALLMYGKSITQ 366
+L Y + +T+
Sbjct: 461 ESLAAYAEQLTE 472
>gi|440231594|ref|YP_007345387.1| exonuclease I [Serratia marcescens FGI94]
gi|440053299|gb|AGB83202.1| exonuclease I [Serratia marcescens FGI94]
Length = 476
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 198/374 (52%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFHDPYAYSWQNGNSRWDLLDVMRACYALRPEGIVWPENDEGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H++AHDA+SDV AT+ +A+L++ PRLF+++L R K + A I P +++
Sbjct: 174 VEHEQAHDAMSDVYATIAMAKLVKQAQPRLFDYLLQHRNKHKLNALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP NKN +I +L D L D +++R+ L +++ D
Sbjct: 234 MFGAARSNTSWVAPLAWHPENKNAVIVCDLAGDISPLLELDADQLRERLYTRRDQLAADQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
PI ++H+N+ P++ +L N R D N++ + + + +K+
Sbjct: 294 PPAPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLNNLQI---LRQHPEVREKVVA 349
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
Y +D ++D +LY+ F S D + I+ P+ L ++ F + +++EL
Sbjct: 350 LYAEAEPFTPAD---DVDAKLYDGFFSDADKAAMKIILQTKPQNLPALDLAFGDGRMKEL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARN+ TL E +RW ++R N + + L++E+L + K+
Sbjct: 407 LFRYRARNYPNTLDDAEQRRWLQHRREAL-----NAERVQAYILQLEALYNQHEGDKAKM 461
Query: 354 --LNALLMYGKSIT 365
L AL YGK +
Sbjct: 462 AQLKALFDYGKQLV 475
>gi|170720191|ref|YP_001747879.1| exonuclease I [Pseudomonas putida W619]
gi|169758194|gb|ACA71510.1| Exodeoxyribonuclease I [Pseudomonas putida W619]
Length = 478
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 198/372 (53%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGIVWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR+ P+L+ ++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRHKQPKLYEWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ SY+ ++ P+ HP N+N LI +L + L IR+ L ++ +
Sbjct: 227 FSAARSYLGVVLPLAWHPRNRNALIVCDLQQETLPLLRESAEVIRERLYTRREELSDGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++ +NR P V++ L VL + R DL A + N W+ L+
Sbjct: 287 PIPLKLVQINRCP-VVAPLSVLRAADQQRLGIDLALVQSR---AEELANQQNAWQHK-LE 341
Query: 239 YKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ D + D E LY F+ +D +R++ P +L ++ F++ ++ EL+F
Sbjct: 342 HIYGKEDFVPSEDPEQQLYEGFLGDRDRRLCEQVRTLDPAQLGQGHWMFDDPRMPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF ETL+ +E +RW + R + + N + F +S A+E ++L+
Sbjct: 402 YRARNFPETLNSEERQRWYGFCQQRLSDPQWGAPNTLGDFEQARQSAWANADEAGRQVLD 461
Query: 356 ALLMYGKSITQK 367
A + + + ++
Sbjct: 462 AWQAHARQLAEQ 473
>gi|422336074|ref|ZP_16417047.1| exodeoxyribonuclease I [Aggregatibacter aphrophilus F0387]
gi|353346260|gb|EHB90545.1| exodeoxyribonuclease I [Aggregatibacter aphrophilus F0387]
Length = 474
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 196/369 (53%), Gaps = 22/369 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P G+ WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGVEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK + I P +++ M
Sbjct: 173 EHTNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEIEKLINTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +L+ P+ HP NKN +I +L + L ++R+ L KK + E
Sbjct: 233 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLEAGV 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ +IH+N+ PIV +LS N R D +N +L + I +K+
Sbjct: 293 LLVPLKLIHINKCPIVAPEKTLLSQNAE-RLGIDRELCAQN---QQRLLASKDIRQKVMD 348
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
D + SD N++ ELYN F S D +AILR++ P+KL+ N F++ ++ +L
Sbjct: 349 IFQQDREFEASD---NVETELYNGFFSDADKNNMAILRTLEPEKLAEHNLRFQDPRIPQL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKY-------RISRFYNKKNNLYNINMFYLEIESLLKKA 346
+F YRAR+F TL+ E +W+KY I RF L N E +LL+K
Sbjct: 406 LFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEILRFEQSLQELAAQNEHNEENLTLLQKV 465
Query: 347 NEHDTKILN 355
E+ KI++
Sbjct: 466 YEYGNKIIS 474
>gi|372274884|ref|ZP_09510920.1| exonuclease I [Pantoea sp. SL1_M5]
Length = 475
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 192/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWAWQNGNSRWDLLDVMRACYALRPEGINWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VSHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D + +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLQLDADTLRERLYTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 AVPVKLVHINKCP-VLAPASTLRPEDAARLNIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLSFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R N + F E+E L L +A+ L
Sbjct: 410 RARNFPGTLDDTEQQRWLQHRRDVL-----NADRVQAFMQELEGLANLHEADAEKVGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|422669167|ref|ZP_16729017.1| exonuclease I [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330981526|gb|EGH79629.1| exonuclease I [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 476
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 195/345 (56%), Gaps = 15/345 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +A DALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAPDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFL 237
+P+ ++H+NR P VI+ L VL S R + D+ A + A+ + +W K+
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDM--AGYQAR-AAQLSERREVWHDKLAA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F Y
Sbjct: 343 VYGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
RARNF +TLS +E RW+ + R + N L++ ++E
Sbjct: 403 RARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTTAWVE 447
>gi|282600282|ref|ZP_05973706.2| exodeoxyribonuclease I [Providencia rustigianii DSM 4541]
gi|282565948|gb|EFB71483.1| exodeoxyribonuclease I [Providencia rustigianii DSM 4541]
Length = 479
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 201/368 (54%), Gaps = 10/368 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP ++G PS +LEHL+ N
Sbjct: 118 IFYRNFYDPYAYSWQQGNSRWDLLDALRACFALRPEGINWPENDDGLPSLRLEHLTKANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+F++ LR K V I P +++
Sbjct: 178 VAHENAHDAMSDVLATINMAKLLKQAQPRMFDYFYQLRNKNKVSQLIDIVEMTPLVHVSG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SY+SL+ P+ HP NKN +I +L D L + +++R+ L K +
Sbjct: 238 MFGALRSYVSLVAPLAWHPDNKNAVIMCDLSADMSPLLTLNADELRERLYTPKAELGDAL 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+ PI+ K L + R D + +N++ + N + K+
Sbjct: 298 PVPIKLVHINKCPILAPE-KTLRTVDAERTGIDRDLCLRNLEI---LRKNPDVRNKLIEI 353
Query: 239 YKINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++ E N +D ++Y+ F S D + I+R +P+ L ++ FE+K+++EL F Y
Sbjct: 354 FSVDQQFEESNDVDRQIYSGFFSPSDRSTMDIIRETAPQNLPGLDLSFEDKRMKELFFRY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
+ARN+ TLSY E +RW ++R F + Y M +++ + +E + L AL
Sbjct: 414 KARNYPATLSYDEQQRWLQHRRDYFTEARLTEY---MQQIQLLMDIHHEDEKRCQQLKAL 470
Query: 358 LMYGKSIT 365
+ Y +
Sbjct: 471 VSYAADLA 478
>gi|410627683|ref|ZP_11338420.1| exodeoxyribonuclease I [Glaciecola mesophila KMM 241]
gi|410152757|dbj|GAC25189.1| exodeoxyribonuclease I [Glaciecola mesophila KMM 241]
Length = 476
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 199/370 (53%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I+V++A Y L P GI WP K +G PSFKLE LS NN+
Sbjct: 111 LYRNFYDPYGREWRNGNSRWDIIDVVRACYALRPEGIEWPLKGDGTPSFKLEDLSKANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+L++ P+L++++ +LR KK V+A + P +I+
Sbjct: 171 EHAAAHDAMSDVHATIAMAKLVKTAQPKLYDYLFNLRFKKNVIALLDITAHTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP NKN I NL D + + + +I L N +E
Sbjct: 231 LPALNGCCTWIAPVAQHPTNKNAFIVVNLALDIQPLIDLSVEEIIHKLYTPSNMLEEGEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI +IH+N+SP VI+ K L R D +N+K + + + K+
Sbjct: 291 RLPIKLIHINKSP-VIAPAKTLDEANAVRLGIDREACLRNLKV---LKQHPELVDKLIAV 346
Query: 239 YKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + +E + D LY+ F S KD + + SP++L ++ FE+ +L+ L+F Y
Sbjct: 347 HSTSREKIEQDADHALYSGAFFSPKDRALMDQVLQSSPEQLVDLTLPFEDPRLDNLLFYY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK---KANEHDTKIL 354
+ARNF +L+ +EL+RW+ +R R + + Y++ LL ++N IL
Sbjct: 407 KARNFPTSLNEQELQRWQNHRKFRLLDDTSPSSITMTDYVQTLELLSEQYQSNNDKLAIL 466
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 467 KALYTYAEQL 476
>gi|416288609|ref|ZP_11649284.1| Exodeoxyribonuclease I [Shigella boydii ATCC 9905]
gi|320177928|gb|EFW52912.1| Exodeoxyribonuclease I [Shigella boydii ATCC 9905]
Length = 475
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R++L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLREHLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R D N+K + N + K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIDRQHCLDNLKV---LRENPQVRDKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW +YR F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEYRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|238919203|ref|YP_002932718.1| exonuclease, putative [Edwardsiella ictaluri 93-146]
gi|238868772|gb|ACR68483.1| exonuclease, putative [Edwardsiella ictaluri 93-146]
Length = 473
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 195/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L P GI WP G PSFKLEHLS N
Sbjct: 112 LFYRNFFDPYAYSWQNGNSRWDLLDVVRTCYALRPEGIVWPENEQGLPSFKLEHLSQANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ LA+ ++ PRLF+++ LR K V I P +++
Sbjct: 172 IEHSNAHDAMADVYATIALAQRVKQAQPRLFDYLFQLRNKNRVAQLIDIAAMTPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP NKN +I +L D L D + +R+ L +N +
Sbjct: 232 MFGALRGNTSLIAPLAWHPENKNAVIVCDLDSDITPLLTLDADALRERLYTPRNELGDAA 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+PI ++H+N+ P++ +L+ N + R D N+ + ++ I K+
Sbjct: 292 PVPIKLVHINKCPVLAPEKTLLADNAV-RLGLDRQRCRDNLAL---LQQHSEIRDKVVSL 347
Query: 236 FLDY-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D SD ++D +LY+ F S D + I+R+ P+ L ++ F ++++ L+
Sbjct: 348 FADAPPFPPSD---DVDSQLYDGFFSDADRQAMQIIRATLPQNLPALDLRFNDRRITPLL 404
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNK--KNNLYNINMFYLEIESLLKKANEHDTK 352
F YRARN+ TL E++RW+++R S + ++ L + M Y E ++
Sbjct: 405 FRYRARNYPATLDESEMRRWQQHRQSMLTPQHVQDYLQTLEMLYNRYEDQPQR-----LT 459
Query: 353 ILNALLMYGKSIT 365
+L AL Y + +
Sbjct: 460 LLQALFDYARELV 472
>gi|304397387|ref|ZP_07379265.1| Exodeoxyribonuclease I [Pantoea sp. aB]
gi|304355005|gb|EFM19374.1| Exodeoxyribonuclease I [Pantoea sp. aB]
Length = 475
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 192/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWAWQNGNSRWDLLDVMRACYALRPDGIIWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D + +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLQLDADTLRERLYTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 PVPVKLVHINKCP-VLAPASTLRPEDAARLGIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLSFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R N + F E+E L L +A+ L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVL-----NAERVQAFMQELEGLANLHEADAEKVGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|374703634|ref|ZP_09710504.1| exonuclease I [Pseudomonas sp. S9]
Length = 477
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 188/323 (58%), Gaps = 17/323 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDLVRTAYALRPEGIVWP-ELEGRVSLKLELLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R+ P+L++++ LR K VL ++ + +P +++
Sbjct: 169 EHGQAHDALSDVRATIALARLLRDKQPKLYSYLYELRSKSRVLDQVK--LLQPMVHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F+ + Y+S++ P+ HP N+N LI +L DP L + +R+ L + ++ E
Sbjct: 227 FAGDNHYLSVVLPLAWHPRNRNALIVCDLQRDPSVLLDETADSLRERLYTRHDALGEGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK----K 234
+P+ ++H+NR P V++ L VL + R + DL+ K A ++ W+ +
Sbjct: 287 PVPLKLLHINRCP-VVAPLSVLRDADIQRLQLDLS---KLQGRADQLIAAQSQWQAKMPE 342
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
I+ D SD + +++LY+ FI +D +RS P++L+ ++ F++ +L EL+
Sbjct: 343 IYRDEAFAGSD---DPEQQLYDGFIGNRDRNLCERVRSCEPEQLATESWPFDDGRLPELL 399
Query: 295 FLYRARNFIETLSYKELKRWKKY 317
F YRARN +LS +E RW+ +
Sbjct: 400 FRYRARNLPSSLSAEEQVRWQVF 422
>gi|386823447|ref|ZP_10110596.1| exonuclease I [Serratia plymuthica PRI-2C]
gi|386379658|gb|EIJ20446.1| exonuclease I [Serratia plymuthica PRI-2C]
Length = 475
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 201/375 (53%), Gaps = 23/375 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R+ +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRSFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGILWPENEDGFPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +A+L++ PRLF+F+L R K + A I P +++
Sbjct: 173 VEHEHAHDAMSDVYATIAMAKLVKQAQPRLFDFLLQHRNKHKLNALIDIAEMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
MF + S + P+ HP NKN +I +L D L +++R+ L ++ +
Sbjct: 233 MFGAARGNTSWVSPLAWHPDNKNAVIMCDLAGDMTPLLTLSADELRERLYTRREDLAAGQ 292
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 293 SPVPLKLVHINKCPVLAPAKTLLPENAE-RLGIDRQACLQNLQL---LRQNPQVREKVVA 348
Query: 238 DYKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+ +D E ++D LY+ F S D + I++ P+ L ++ F + +++E
Sbjct: 349 LF----ADAEPFKAVDDVDARLYDGFFSDADKAAMKIIQQTKPQNLPALDLTFSDGRMKE 404
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHD 350
L+F +RARN+ TL E +RW ++R ++ + + L++ESL L + ++
Sbjct: 405 LLFRFRARNYPNTLDDAEQRRWLQHRQEMLSAER-----VQSYVLQLESLYNLHEGDKEK 459
Query: 351 TKILNALLMYGKSIT 365
T +L AL YGK +
Sbjct: 460 TALLKALFEYGKELV 474
>gi|381404031|ref|ZP_09928715.1| exonuclease I [Pantoea sp. Sc1]
gi|380737230|gb|EIB98293.1| exonuclease I [Pantoea sp. Sc1]
Length = 475
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWSWQNGNSRWDLLDVMRACYALRPDGINWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF F+ + R K ++ I P +P +++
Sbjct: 174 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKNKLMTLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLELDAAALRERLYTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 AVPVKLVHINKCP-VLAPASTLRPEDAARLGIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLTFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R + + + F E+ESL L +A+ L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVLNSDR-----VQAFMQELESLASLHEADAEKLGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|291326156|ref|ZP_06123420.2| exodeoxyribonuclease I [Providencia rettgeri DSM 1131]
gi|291315456|gb|EFE55909.1| exodeoxyribonuclease I [Providencia rettgeri DSM 1131]
Length = 479
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 203/374 (54%), Gaps = 22/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P G+ WP +G PS +LEHL+ N
Sbjct: 118 IFYRNFYDPYAYSWQQGNSRWDLLDTLRACFALRPEGLQWPENEDGLPSMRLEHLTKANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+F++ LR K + I P +++
Sbjct: 178 VAHENAHDAMSDVLATINMAKLLKAAQPRMFDYFYQLRNKNKISQLIDIVEITPLVHVSG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + SY+SL+ P+ HP NKN +I +L D + D+ ++R L K
Sbjct: 238 MFGALRSYVSLVAPLAWHPDNKNAVIMCDLSADISPLVELDVQQLRTRLYTPKAELAGAS 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ PI+ K L R D + +N++ ++ N I K +
Sbjct: 298 PVPVKLVHINKCPILAPE-KTLRPEDAERTGVDRDLCMRNLE---TLRKNPEIRNKLIEL 353
Query: 236 FLDYKI-NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + ++ SD ++D ++YN F S D + I+R SP+ L + FE+K+++EL
Sbjct: 354 FSEPQVFTESD---DVDTQIYNGFFSPSDRSTMDIIRETSPQNLPALELSFEDKRMKELF 410
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-- 352
F Y+ARN+ TLSY E +RW ++R R Y + L Y++ LL ++HD K
Sbjct: 411 FRYKARNYPATLSYDEQQRWLQHR--RDYFSEERLTE----YMQQIQLLLVEHQHDEKRC 464
Query: 353 -ILNALLMYGKSIT 365
L AL+ Y + +
Sbjct: 465 QQLKALISYARDLA 478
>gi|308187438|ref|YP_003931569.1| exodeoxyribonuclease I [Pantoea vagans C9-1]
gi|308057948|gb|ADO10120.1| exodeoxyribonuclease I [Pantoea vagans C9-1]
Length = 475
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 194/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYGWAWQNGNSRWDLLDVMRACYALRPDGINWPENEEGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV ATL +A+L++ P+LF+F+ + R K ++ I P +P +++
Sbjct: 174 VAHENAHDAMSDVYATLAMAKLVKEKQPKLFDFLFTHRNKNKLMNLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N LI +L D L D + +R+ L KN +
Sbjct: 234 MFGAARGNTSWIVPLAWHPDNRNALIVVDLAGDMSPLLQLDADTLRERLYTPKNDLGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + +F +
Sbjct: 294 AVPVKLVHINKCP-VLAPASTLRPEDAARLGIDRQHCLANLALLRQQPDVREKLVTLFAE 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD ++D +LY+ F S D + I+R +P L ++ FE+ ++ +L+F Y
Sbjct: 353 AEPFTPSD---DVDTQLYDGFFSDADRAGMNIIRQTAPANLPALDLSFESARVAKLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R + + + F E+E L L +A+ L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVLNSDR-----VQAFMQELEGLANLHEADAEKVGQLK 464
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 465 ALYLYAQEL 473
>gi|443468901|ref|ZP_21059107.1| Exodeoxyribonuclease I [Pseudomonas pseudoalcaligenes KF707]
gi|442898150|gb|ELS24936.1| Exodeoxyribonuclease I [Pseudomonas pseudoalcaligenes KF707]
Length = 476
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 196/358 (54%), Gaps = 12/358 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE L+ N +
Sbjct: 110 LYRNFYDPYAREWQGGNSRWDLIDLMRTAYALRPEGIEWP-QQDGRVSLRLELLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARL+R P+LF+++ LR K V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLVRQRQPKLFDYLFQLRSKHKVQDQVR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ ++S+ P+ HP N+N L+ +L DP L ++R L +++ E
Sbjct: 227 FSAERHFLSVSLPLAWHPRNRNALVVLDLQADPAPLLELSAEQLRQRLYTRRDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R DL + A+ ++ +W+ K+ +
Sbjct: 287 PVPLKLLHINRCP-VVAPLNVLREGDRQRLGVDLELCQRR---AALLVEEAPLWQPKLPI 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ F+ +D +R P++L N+ F++ +L EL+F Y
Sbjct: 343 LYAEEAFTALDDPEQQLYDGFLGDRDRRLCEQVRRADPQRLGLENWPFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKIL 354
RARNF ETLS + RW ++ +R + + N + F+ +E KA +L
Sbjct: 403 RARNFPETLSEVDRSRWVEFCRNRLKSPEFGAPNTLESFFQALEEFQSKAEPAQQAVL 460
>gi|407802964|ref|ZP_11149803.1| exonuclease I [Alcanivorax sp. W11-5]
gi|407023124|gb|EKE34872.1| exonuclease I [Alcanivorax sp. W11-5]
Length = 482
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 198/372 (53%), Gaps = 15/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWDLI+V++ + L P GI WP + +G PSFKLE L+ N L
Sbjct: 111 LYRNFHDPYAREWQNGNSRWDLIDVVRLCHALRPDGIQWPQREDGTPSFKLELLTQANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ LA+L+R+ P+LF + L LR K+ V ++ P +++
Sbjct: 171 SHEAAHDALSDVYATIALAKLLRDRQPKLFEYALGLRFKQAVAEQLNLVTQAPVLHVSGR 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +L+ P+ HP N+N +I ++L DP L + I+ + + +
Sbjct: 231 IPAARFCSALVMPLMAHPTNRNSVIVYDLATDPTPLLEGSVEDIQRQVFSSAAALEAQDE 290
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKK 234
IP+ IH+NR+P V++ +K++ + R + D++ ++ ++ L K+
Sbjct: 291 ARIPLKEIHINRAP-VVATVKLVDDAVAARLQLDMDACRRHWQRLRQGGDALRARL--KE 347
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F + + D LY F S D + +R P +L+ +F FE+++L E+
Sbjct: 348 VFGARDFTE---QTDPDSMLYSGGFFSDADRQLMHRIRETPPSELARQSFPFEDRRLPEM 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK- 352
++ YRARN+ ETLS +EL W+++ R + +++ F + +L + + +
Sbjct: 405 LWRYRARNYPETLSPQELADWRQFCAERLRDADPARLSLSAFRERLGALAAEVEDDKGRF 464
Query: 353 ILNALLMYGKSI 364
IL+ L Y +
Sbjct: 465 ILHELSEYADDL 476
>gi|85711607|ref|ZP_01042664.1| Exonuclease I [Idiomarina baltica OS145]
gi|85694467|gb|EAQ32408.1| Exonuclease I [Idiomarina baltica OS145]
Length = 486
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 199/374 (53%), Gaps = 19/374 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PY W+N SRWDLI+V++A Y L P GI WP +G+ + +LE L+ N +
Sbjct: 120 YRNFYDPYAHTWQNGNSRWDLIDVVRACYALRPEGIHWPEDEDGRVTLRLEKLTQANRID 179
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H +AHDA+SDVRAT+ +A+L+ P+L+ F L R K ++ I W +P +++ ++
Sbjct: 180 HGQAHDAMSDVRATIAMAQLLAEKQPKLWQFALQHRHKNDLMNLINWQQIKPLVHVSGLY 239
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK----E 178
+ + ++S + PI H N LI W+L +P F ++RD L + + +
Sbjct: 240 GADNFFVSAVLPIGFHAQRANALIAWDLRINPADFADYSTEQLRDLLFASRQQHETNGTQ 299
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ I LNR P ++ L L++ R + DL + + + N+ +I
Sbjct: 300 RPGATQITLNRCPF-LAPLATLTAEAQQRTQIDLATLRERTRW---LAENSDFRDRIM-- 353
Query: 239 YKINNSDLE------LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
I +S LE L++D+ LY+ F +D L ++R+M P++L+ + ++ +L E
Sbjct: 354 -AIFDSALEHGEQPPLDVDQRLYDGFFDAQDKQNLQMIRAMRPEQLAGIELNTQDNRLPE 412
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHD 350
L+F YRARN+ TL EL+RW+++ R N +I F ++E L + + N+H
Sbjct: 413 LLFRYRARNYPATLDQSELQRWQQFCRQRLTEPTNGQLSITEFAEKLEGLAQQYQDNKHR 472
Query: 351 TKILNALLMYGKSI 364
++L +L Y + +
Sbjct: 473 MQLLKSLYDYAQGL 486
>gi|417707954|ref|ZP_12356990.1| exodeoxyribonuclease I [Shigella flexneri VA-6]
gi|420331815|ref|ZP_14833473.1| exodeoxyribonuclease I [Shigella flexneri K-1770]
gi|333002524|gb|EGK22085.1| exodeoxyribonuclease I [Shigella flexneri VA-6]
gi|391251611|gb|EIQ10823.1| exodeoxyribonuclease I [Shigella flexneri K-1770]
Length = 474
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 205/372 (55%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLAHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDIDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW+++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWQEHRHQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|114562814|ref|YP_750327.1| exonuclease I [Shewanella frigidimarina NCIMB 400]
gi|114334107|gb|ABI71489.1| Exodeoxyribonuclease I subunit C [Shewanella frigidimarina NCIMB
400]
Length = 473
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 208/371 (56%), Gaps = 21/371 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N SRWD+I++++A Y P GI WP K +G PSFKLE L+ N L
Sbjct: 116 FYRNFIDPYGREWQNGNSRWDIIDLVRACYAFRPDGINWPKKEDGSPSFKLELLTQANGL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ +P+L+ + +LR+K+ V I +P +++
Sbjct: 176 SHEKAHDAMSDVYATIAMAKLIKQTHPKLYEYYFNLRRKQAVADHIDVLKMQPLVHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S+ +L+ P+ HP NKN +I NL D L +I D + + + E+
Sbjct: 236 ISALQGCTTLIAPVAYHPTNKNAVICINLAMDISPLLELSAQEINDRMYTSRQNLAENEL 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+ P I + K+L + + +FD A + K + N+ + +K+
Sbjct: 296 AIPLKQIHLNKCPF-IGSPKLLDDEVAEKLQFDKAFAREQYK---RLKNHPELREKLNQV 351
Query: 239 YKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+++ SD + D +L F S D K+ I+ +P L+ + F++ ++ E++F
Sbjct: 352 FEL-ESDRKAITDPDLMLYSGGFFSHADKTKIDIICHTAPHNLAALALQFDDPRINEMLF 410
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
+RARN+ ETLS E ++W+ + R + + +++E+L+++ NEH K+
Sbjct: 411 RFRARNYPETLSDSEARKWRDFCQQRLSDAD--------YVIKLENLVEETSENEHKQKL 462
Query: 354 LNALLMYGKSI 364
L AL Y +S+
Sbjct: 463 LKALYQYLQSL 473
>gi|120555513|ref|YP_959864.1| exonuclease I [Marinobacter aquaeolei VT8]
gi|120325362|gb|ABM19677.1| Exodeoxyribonuclease I subunit C [Marinobacter aquaeolei VT8]
Length = 482
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 198/371 (53%), Gaps = 10/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ Y L P GI WP K +G PSF+LE L+ N +
Sbjct: 110 LYRNLRDPYAREWQNGNSRWDIIDMVRLTYALRPEGINWPRKEDGSPSFRLEELTVANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F+L+ + K + +P F+I+
Sbjct: 170 AHEAAHDAMSDVLATIAVAKLIKEKQPKLFDFVLNNKDKHSARQMLDTASMKPVFHISAK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ NKN +I ++L DP+ + + +IR+ + + E +
Sbjct: 230 YPAARGCCALVAPLAESLSNKNQVIVYDLREDPEALINASVEEIRERVFTSQAELGEGVS 289
Query: 181 --PISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P+ + LN+ P++ + L LS + + D + N+ + + F
Sbjct: 290 RFPLKGVQLNKCPVLAPATMLSTLSQERLAELELDGDVLRANLAKLRKAPDLPARVAQAF 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ SDL + DE+LY FISK D KL L + L+ FE+ +L E++F
Sbjct: 350 -EQDFQGSDL-TDPDEQLYAGGFISKTDREKLNWLLTQPVDTLAEQEMSFEDPRLPEMLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
YRARN+ +TL +E++RW+++R R K ++ + E++ L +I
Sbjct: 408 RYRARNYPDTLIGEEMERWEQFRTERLMQPKKGWRSLEAYGQELQRLAADTELTPRKQQI 467
Query: 354 LNALLMYGKSI 364
L L +YG+S+
Sbjct: 468 LEDLHLYGESL 478
>gi|416079244|ref|ZP_11586170.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337543|ref|ZP_21151497.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348003208|gb|EGY43859.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546776|gb|ELT56382.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 474
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 175/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D +N + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAQNRQRLQEAKDIRQKVMDIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYRTLNRAEQIKWQKY 429
>gi|288934485|ref|YP_003438544.1| exodeoxyribonuclease I [Klebsiella variicola At-22]
gi|288889194|gb|ADC57512.1| Exodeoxyribonuclease I [Klebsiella variicola At-22]
Length = 474
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GITWP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGITWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +I+
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDAERLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAQDIV 474
>gi|242239639|ref|YP_002987820.1| exonuclease I [Dickeya dadantii Ech703]
gi|242131696|gb|ACS85998.1| Exodeoxyribonuclease I [Dickeya dadantii Ech703]
Length = 476
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 196/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY W+N SRWDL++ ++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 LFYRNFIDPYAYSWQNGNSRWDLLDALRACYALRPEGIVWPENEEGFPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA+SDV AT+ +ARL + PRLF+++ LR K V A I +P +++
Sbjct: 174 IEHEHAHDAMSDVYATIAMARLFKQTQPRLFDYLYQLRNKNKVNALIDIAEMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L + +R L +++ E+
Sbjct: 234 MFGAARGNTSWIVPLAWHPENRNAVIVCDLAGDIDPLLNLSADALRTRLYTRRDLLGENE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P V++ L R D N+K + + + +K+
Sbjct: 294 SPVPIKLVHINKCP-VLAPAATLRPEDAARLGVDRQRCLDNLKL---LRQHPLVREKVVA 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + ++D +LY+ F D + I+R +P+ L + F ++++EEL+F
Sbjct: 350 LFADAPAFEPAADVDLQLYDGFFGDADRAAMTIIRETAPQHLPALKLQFADRRMEELLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--L 354
YRARNF TL +E +RW ++R F ++ Y+ + ESL + + + KI L
Sbjct: 410 YRARNFPGTLDDQEQQRWLRHRREIFTPERLQSYSETL-----ESLYQIHADDEKKIALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFTYAQQLV 475
>gi|372269176|ref|ZP_09505224.1| exonuclease I [Alteromonas sp. S89]
Length = 483
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 203/375 (54%), Gaps = 20/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGK----PSFKLEHLSF 57
+RNL++PYEREWK+ SRWD+I++++ Y L P GI WP ++ PSF+LE L+
Sbjct: 115 LYRNLLDPYEREWKSGNSRWDIIDMVRLTYALRPEGIVWPERDGADGTRVPSFRLEELTA 174
Query: 58 VNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIAR-PFF 116
N +SH+ AHDALSDV AT+ +ARLIR P+L++++ LR+K+ V A+I P R P
Sbjct: 175 ANGISHEGAHDALSDVHATIDMARLIREKQPKLYDYVYKLRRKQEV-AKILNPRERKPLL 233
Query: 117 YITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+I+ + H +++ + P+ +HP+N+N +I NL DP+ L D +R+ L ++
Sbjct: 234 HISGKVPASHGHLTYVLPLAMHPVNRNAVICANLAMDPQPILDLDAEALRERLYTARDQL 293
Query: 177 KE-DIP--ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
E ++P + +IH+NR P V++ +LS K D N + L+ T
Sbjct: 294 AEGELPAGLKLIHMNRCP-VLAPANMLSDERAAELKIDKEACRANWQALQG-LDLTEKLH 351
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLA----ILRSMSPKKLSNVNFCFENKK 289
++FLD + D+E LY+ F++ D L P+ L+ F + +
Sbjct: 352 QVFLDGEFPKKDVEAR----LYDGFMNDADRDTCRQLHNALAGRGPEALA-AEVPFSDSR 406
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH 349
L EL+F RARNF +TLS E +RW+++R R + + Y E + L++
Sbjct: 407 LPELLFRLRARNFPQTLSEDEQERWEEWRYQRLTDPQFGASITMEPYFEEIARLREEYPE 466
Query: 350 DTKILNALLMYGKSI 364
+L+ L +G ++
Sbjct: 467 RIALLDQLEAWGDAL 481
>gi|83647678|ref|YP_436113.1| exonuclease I [Hahella chejuensis KCTC 2396]
gi|83635721|gb|ABC31688.1| Exonuclease I [Hahella chejuensis KCTC 2396]
Length = 483
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 200/372 (53%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I++++ Y + P GI WP G PSF+LE L+ N +
Sbjct: 110 LYRNFYDPYSREWRNGNSRWDVIDMVRLTYAMRPDGINWPMNAEGVPSFRLEELTKANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +ARLI+ P+L++++L R KK + + +P F+++
Sbjct: 170 THEAAHDAMSDVYATIAVARLIKTAQPKLYDYVLGHRNKKVLEGLVDIERMKPLFHVSSK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + +++ PI HP N N +I ++L DP + + KIR+ + E
Sbjct: 230 FPAALGCCAMVAPIARHPTNPNGVIVYDLRADPSTWTHLPVEKIRERIFTSNEDLPEGAE 289
Query: 180 -IPISMIHLNRSPIVISN--LKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
IP+ ++HLN+ PI++ + LK + + ++ D + +++ N I +++
Sbjct: 290 RIPLKVVHLNKCPILVESKILKTMDPERLRGFQLDGDKLRSHLQALRQAEN---IQQRVA 346
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ D E + D LY F S D + + SP+ L + FE+ +L+E++F
Sbjct: 347 EVFNEPMDDSETDPDLMLYSGGFFSNNDRELMTFIHEQSPEVLGELELPFEDPRLQEMLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKAN--EHDTK 352
YRARNF TL+ +E+++W++YR R + + + ++ ++E L +
Sbjct: 407 RYRARNFPGTLNEEEMEKWERYRYHRLAGESSGASISFQAYFKKLEQLAANPDITPFQLS 466
Query: 353 ILNALLMYGKSI 364
IL L +YG+SI
Sbjct: 467 ILQDLHLYGESI 478
>gi|390952498|ref|YP_006416257.1| exonuclease I [Thiocystis violascens DSM 198]
gi|390429067|gb|AFL76132.1| exonuclease I [Thiocystis violascens DSM 198]
Length = 479
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 203/375 (54%), Gaps = 20/375 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RNL +PY REW+N SRWDLI+ ++ + L P G+ WP +G SFKLE L+ N
Sbjct: 109 LLYRNLYDPYAREWRNGNSRWDLIDTLRLAHALRPDGLEWPTHEDGTVSFKLEQLTAANA 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKY---VLAEIGWPIARPFFY 117
+ H +AHDAL+DVRATL LAR +R PRLF++ L+LR K+ +LA+ P +
Sbjct: 169 IGHAQAHDALADVRATLALARRLRQAQPRLFDYTLTLRDKRRGRDLLAK-----GEPLLH 223
Query: 118 ITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK 177
++ + + ++ ++P+ HP N N +I ++L DP + L + ++R L
Sbjct: 224 VSARYPAALGCLAPVFPVAQHPTNGNGVICFDLRADPAQLLDLSVEELRARLFTPSAHLP 283
Query: 178 ED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK-CASSILNNTYIWK 233
E +P+ +H+NR+P V++ LK L++ R++ D + + + A+S + I +
Sbjct: 284 EGVERVPLKTVHVNRAP-VLATLKTLTAQTAERWRIDPDQVVERARWIAASAAD---IQR 339
Query: 234 KIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
++ +++ E + D LY F S +D L + +SP +L+ + FE+ +L
Sbjct: 340 RVQAAHQLPEGPAETDPDLMLYSGGFFSDQDRRILDGMHRLSPAELAQASPVFEDARLPR 399
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLK--KANEH 349
++F YRARN+ E+L+ +E + W R++R + I+ + + L + A+
Sbjct: 400 MLFRYRARNWPESLTPEEREDWDAERLTRLTDPDGGGSIQIDPYEQRLMELAEIHAADPG 459
Query: 350 DTKILNALLMYGKSI 364
+IL AL + + +
Sbjct: 460 KLQILEALSGWAEQV 474
>gi|194431379|ref|ZP_03063671.1| exodeoxyribonuclease I [Shigella dysenteriae 1012]
gi|417672666|ref|ZP_12322128.1| exodeoxyribonuclease I [Shigella dysenteriae 155-74]
gi|194420204|gb|EDX36281.1| exodeoxyribonuclease I [Shigella dysenteriae 1012]
gi|332091578|gb|EGI96659.1| exodeoxyribonuclease I [Shigella dysenteriae 155-74]
Length = 475
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R D N+K + N + K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIDRQHCLDNLKV---LRENPQVRDKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW +YR F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEYRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|429330496|ref|ZP_19211286.1| exonuclease I [Pseudomonas putida CSV86]
gi|428764843|gb|EKX86968.1| exonuclease I [Pseudomonas putida CSV86]
Length = 476
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 197/372 (52%), Gaps = 12/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+ ++ Y L P GI WP + NG+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDTVRTAYALRPEGIEWP-QVNGQVSLRLELLSAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AH+ALSDVRAT+ LARLIR PRL+ ++ LR K VL +I + +P +I+
Sbjct: 169 HHGQAHEALSDVRATIALARLIRQKQPRLYEWLFELRSKHKVLDQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L D +R L ++ E
Sbjct: 227 FSAARNYLGVVLPLAWHPANRNALIVCDLHQDIAPLLKEDSEVLRQRLYMRREEMPEGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R D++ + ++ ++ W+ K+
Sbjct: 287 PVPLKLLHINRCP-VVAPLAVLRKQDQLRLGLDMS---ELLRRGEQLIAVQEQWENKLTS 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y+ + +++LY+ F +D +R P++L++ + F++ +L EL+F Y
Sbjct: 343 IYEGREFAPGEDPEQQLYDGFFGDRDRRLCEQVRMADPQQLASGQWMFDDPRLTELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTKILNA 356
RARNF +LS E +W+ + R ++ + + F ++ L A+ +L A
Sbjct: 403 RARNFPASLSETEQVQWRTFCQQRLNDEAMGAPHTLAAFETALQEALATADGAQRALLEA 462
Query: 357 LLMYGKSITQKI 368
+ + Q++
Sbjct: 463 WRAHANGLRQRL 474
>gi|365967791|ref|YP_004949353.1| exonuclease I [Aggregatibacter actinomycetemcomitans ANH9381]
gi|416080369|ref|ZP_11586230.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|348011257|gb|EGY51227.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|365746704|gb|AEW77609.1| exonuclease I [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 420
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 175/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 59 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 118
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 119 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGM 178
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 179 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 238
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D +N + + IF
Sbjct: 239 LPVPLKLIHINKCPIVAPAKTLLPQN-SERLGIDQELCAQNRQRLQEAKDIRQKVMDIF- 296
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 297 -HQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 355
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 356 RARHFYRTLNRAEQIKWQKY 375
>gi|410616923|ref|ZP_11327907.1| exodeoxyribonuclease I [Glaciecola polaris LMG 21857]
gi|410163546|dbj|GAC32045.1| exodeoxyribonuclease I [Glaciecola polaris LMG 21857]
Length = 476
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 206/373 (55%), Gaps = 17/373 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I+V++A Y L P GI WP K +G PSFKLE LS NN+
Sbjct: 111 LYRNFYDPYAREWRNGNSRWDIIDVVRACYALRPDGIEWPLKEDGSPSFKLEDLSQANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+GLA+L++ P+L++++ +LR KK V+A P +I+
Sbjct: 171 EHSAAHDAMSDVYATIGLAKLVKTVQPKLYDYLFNLRLKKNVIALFDLNNHTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ H + + PI HP+NKN I NL D + L +++I L N +E
Sbjct: 231 LPALHGCCTWIAPIAQHPINKNAYIVVNLALDIRPLLSLTVDEIIAKLYTPSNMLEEGEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI +IH+N+SP V++ K LS + R + +N++ + + + +K+
Sbjct: 291 RLPIKLIHVNKSP-VLAPAKSLSEDNAERLGINRATCLQNLQL---LKQHPELVEKLITV 346
Query: 239 YKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N E D LY+ F S +D + + SP +L+++ FE+ +L+ L+F Y
Sbjct: 347 HSENKPKAEHEADHALYSGAFFSPRDRDLMNQVIGCSPAQLADLTLPFEDPRLDTLLFYY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMF-YLEIESLLKKANEHDT----- 351
+ARNF TL+ EL+RW+ +R R + + + NI M Y++ LL + EH T
Sbjct: 407 KARNFPTTLNELELQRWQNHRKFRLLD-EGSPSNITMSDYMQSLELLSQ--EHQTNNDKL 463
Query: 352 KILNALLMYGKSI 364
IL AL Y + +
Sbjct: 464 AILKALYRYAEQL 476
>gi|290508687|ref|ZP_06548058.1| exodeoxyribonuclease I [Klebsiella sp. 1_1_55]
gi|289778081|gb|EFD86078.1| exodeoxyribonuclease I [Klebsiella sp. 1_1_55]
Length = 474
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GITWP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGITWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTSRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAQDIV 474
>gi|308049114|ref|YP_003912680.1| exodeoxyribonuclease I subunit C [Ferrimonas balearica DSM 9799]
gi|307631304|gb|ADN75606.1| Exodeoxyribonuclease I subunit C [Ferrimonas balearica DSM 9799]
Length = 470
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 198/369 (53%), Gaps = 16/369 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I++++A Y L P GI WP + +G PSFKLEHL+ N +
Sbjct: 112 LYRNFFDPYAREWQNGNSRWDIIDLVRACYALRPEGIVWPEREDGAPSFKLEHLTAANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV+AT+ LA+LI+ P+L+ + LR K++ ++I +P +++
Sbjct: 172 GHDSAHDAVSDVKATIALAKLIKTTQPKLYEWAFRLRNKRFAASQIDILALKPLLHVSSR 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFKE 178
F + SL+ P+ HP NKN + +L DP L DI ++ L + +
Sbjct: 232 FPASQGCASLVLPMAWHPENKNAVACVDLAMDPTPLLEWDIETLKAKLYQKAVDRTEGEP 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+SP + + +N R D ++ K ++ + +K +
Sbjct: 292 RVPVKLVHMNKSPFIAPASSLEDANAE-RLGLDKAACREHYKLLRQ--HHAEVREKLHGL 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F D + + N D +LY F S+ D ++ ++RS +P+ L+ + F + +L +L F
Sbjct: 349 FSDDAPPQREPD-NPDVQLYGGFFSEADRAQMELVRSTAPEHLAALEPQFVDPRLPKLFF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARN+ TLS E +RW ++ + + ++N+ + + S +E K+L
Sbjct: 408 RYRARNYPNTLSEAEQRRWVQH-CQQSLADADYVHNLEQLFEQHSS-----DEEKMKLLT 461
Query: 356 ALLMYGKSI 364
AL Y +S+
Sbjct: 462 ALGHYLQSL 470
>gi|261868004|ref|YP_003255926.1| exonuclease I [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413336|gb|ACX82707.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 475
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 175/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 234 LGNYRGNTTLIAPLTWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D +N + + IF
Sbjct: 294 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAQNRQRLQEAKDIRQKVMDIF- 351
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 352 -HQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 410
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 411 RARHFYRTLNRAEQIKWQKY 430
>gi|329298840|ref|ZP_08256176.1| exonuclease I [Plautia stali symbiont]
Length = 473
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 180/322 (55%), Gaps = 11/322 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY W+N SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 112 IFYRNFIDPYGWSWQNGNSRWDLLDVMRACYALRPEGIVWPENDDGFPSFKLEHLTQANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV ATL +A+L++ P+LF F+ + R K+ ++ I P +P +++
Sbjct: 172 VAHEQAHDAMSDVYATLAMAKLVQEKQPKLFEFLFTHRNKQKLMTLIDIPQMKPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP NKN LI +L D L +++R+ L + + +
Sbjct: 232 MFGAARGNTSWIVPLAWHPDNKNALIVADLAGDMTPLLTLSPDELRERLYTRHSDLGDLP 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
+PI ++H+N+ P V++ L R D N ++ + + N +
Sbjct: 292 AVPIKLVHINKCP-VLAPANTLRPEDAERLGIDRQHCLANLALLRQHAEVRENV-----V 345
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
L + ++D +LY+ F S D + ILR P+ L ++ FE+K++ +L+F
Sbjct: 346 TLFAEAEPFTPSEDVDAQLYDGFFSDADRAGMNILRQTPPQNLPALDLTFEDKRIAKLLF 405
Query: 296 LYRARNFIETLSYKELKRWKKY 317
YRARNF TL KE +RW ++
Sbjct: 406 RYRARNFPGTLDDKEQQRWLQH 427
>gi|419958290|ref|ZP_14474354.1| exonuclease I [Enterobacter cloacae subsp. cloacae GS1]
gi|388606548|gb|EIM35754.1| exonuclease I [Enterobacter cloacae subsp. cloacae GS1]
Length = 474
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K + +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDPLRERLYTPKEALGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + N Y + M Y + E N +L
Sbjct: 410 RARNYPGTLDEAEQERWLQHRRNVFTPEFLNSYAQELEMLYGQYE-----GNAEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALFQYAQEIV 474
>gi|444347149|ref|ZP_21155097.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|443540872|gb|ELT51388.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 474
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 175/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIAPLTWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D +N + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAQNRQRLQEAKDIRQKVMDIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYRTLNRAEQIKWQKY 429
>gi|254482823|ref|ZP_05096060.1| Exonuclease C-terminal domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214036904|gb|EEB77574.1| Exonuclease C-terminal domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 460
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 181/331 (54%), Gaps = 15/331 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I++++A Y L P GI WP + +G+PSF+LE L+ N +
Sbjct: 88 LYRNFYDPYGREWQNGNSRWDIIDMVRACYALRPEGIEWPLREDGQPSFRLEALTAANGI 147
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDALSDV AT+ +ARLI+ PRL++++L R K+ V + +P +++ M
Sbjct: 148 AHEAAHDALSDVHATIAMARLIKTKQPRLYDYVLKHRDKRSVSTLLDLDAMKPVLHVSGM 207
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
F + I L+ P+ +HP NKN +I ++L+ DP + + R L + + E
Sbjct: 208 FGAVRHNIGLIVPLAMHPTNKNEVICYDLMTDPAMLMQQSPEETRTLLYTRADELPEGTE 267
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL------NNTYIW 232
+ +H+N+ PI+++ K+ R L + + + + L ++
Sbjct: 268 RPGLKSVHINKCPILVTA-KMADPETAAR----LGISGEQCRAHLAALREYRGRDSQGFV 322
Query: 233 KKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLE 291
+KI + D + D LY F D + +R S ++L++ F FE+ +L
Sbjct: 323 QKIQAIFSGRQFDEITDPDRMLYSGGFFGATDKRLMDQVRESSAEELASATFPFEDGRLT 382
Query: 292 ELIFLYRARNFIETLSYKELKRWKKYRISRF 322
E++F YRARN+ +TLS +EL W++YR R
Sbjct: 383 EMLFRYRARNYPQTLSGEELALWEEYRFQRL 413
>gi|398799020|ref|ZP_10558314.1| exonuclease I [Pantoea sp. GM01]
gi|398099303|gb|EJL89567.1| exonuclease I [Pantoea sp. GM01]
Length = 473
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 197/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N+
Sbjct: 112 IFYRNFFDPYGWSWQNGNSRWDLLDVMRACYALRPEGIVWPENDDGFPSFKLEHLTKANS 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV ATL +A+L++ P+LF F+ + R K+ ++ I P +P +++
Sbjct: 172 VAHEQAHDAMSDVYATLAMAKLVKEKQPKLFEFLFTHRNKQKLMTLIDIPQMKPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHD--PKKFLLNDINKIRDYLCFKKNSFKE 178
MF + S + P+ HP N+N LI +L D P L ++ + R Y
Sbjct: 232 MFGAARGNTSWIVPLAWHPDNRNALIVADLAGDMSPLLELESEELRERLYTRHSDLGDLA 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF-L 237
+PI ++H+N+ P V++ L R D N+K + + + +K+ L
Sbjct: 292 AVPIKLVHINKCP-VLAPASTLRPEDAARLGIDRQRCLANLKV---LREHAEVREKVVAL 347
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D +LY+ F S D + ILR P+ L ++ FE+K++ +L+F Y
Sbjct: 348 FAEAEPFKPTDDVDAQLYDGFFSDADRAGMNILRQTPPQNLPALDLTFEDKRIGKLLFRY 407
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTKILN 355
RARNF TL E +RW ++R N + F E+ESL L + N L
Sbjct: 408 RARNFPGTLDDAEQQRWLQHRREVL-----NADRVQAFLQELESLASLHEDNSEKMAQLK 462
Query: 356 ALLMYGKSI 364
AL +Y + +
Sbjct: 463 ALYLYAQEL 471
>gi|339056138|ref|ZP_08648672.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC2047]
gi|330720654|gb|EGG98904.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC2047]
Length = 478
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 201/377 (53%), Gaps = 17/377 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWD+I++++ L P GI WP +G PSFKLE L+ N +
Sbjct: 108 LYRNFYDPYAREWQHGNSRWDIIDMVRLTRALRPEGINWPEHEDGSPSFKLEQLTAANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ LA+LI+ P+L++++ R K+ V ++ +P +I+ M
Sbjct: 168 SHEAAHDALSDVWATIELAKLIKTKQPKLYDYVYKHRDKRLVDQQLNVVAQKPVLHISSM 227
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + +++ P+ +NKN + ++L DP+ L +I + + ++ E
Sbjct: 228 FPADRGCAAIVVPLARDVVNKNAVYVYDLSVDPEPLLRLSAEQIAERIFTRREDMPEGVE 287
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
+PI +H+N+ PIV + + V+S+ R DL N IK A+ I + +
Sbjct: 288 RVPIKAVHINKCPIV-APVNVVSAEAAERLGIDLTACRANLEHIKAAAGIAEKV---QAV 343
Query: 236 FLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + D + D+ LY F S D + LR M+P++LS F + +L +++
Sbjct: 344 FSSREFETPD---DPDQALYSGGFFSSHDRQLMEELRQMTPEQLSAAKLPFRDARLPDML 400
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLL--KKANEHDT 351
F YRARN+ TLS E +W+ +R S F ++K + ++ +Y I+ L+ +
Sbjct: 401 FRYRARNYPATLSDDERAQWQVFRRSCFDDEKIGSRLTLDSYYQRIDELMNAPQTTLEQK 460
Query: 352 KILNALLMYGKSITQKI 368
+IL L YG S+ + +
Sbjct: 461 QILIQLQAYGVSLQESL 477
>gi|50121489|ref|YP_050656.1| exonuclease I [Pectobacterium atrosepticum SCRI1043]
gi|49612015|emb|CAG75464.1| exodeoxyribonuclease I [Pectobacterium atrosepticum SCRI1043]
Length = 475
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 200/371 (53%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNSNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 IAHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKISALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D + +R+ L ++++ D
Sbjct: 233 MFGAARSNTSWIVPLAWHPDNRNAVIMCDLAGDMTPLLELDSDALRERLYTRRDALTADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P V++ L R D N+ + NN I +K+
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAARLGIDRQRCLDNLAL---LRNNADIREKVVA 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L ++ ++D LY+ F D + + I++ +P+ L ++ F + +LE L F
Sbjct: 349 LFAEVPAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLFFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--L 354
YRARNF TL +E +RW ++R + F ++ + + E+ L + + K+ L
Sbjct: 409 YRARNFPGTLDDREQQRWLQHRRAVFTPER-----LQSYLSELSDLYQLHEDDKEKMTQL 463
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 464 KALYAYAQDLV 474
>gi|295098241|emb|CBK87331.1| Exodeoxyribonuclease I subunit C [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 478
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 118 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 178 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K + +
Sbjct: 238 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKEALGDLP 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 298 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 353
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 354 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + N Y + M Y + E N +L
Sbjct: 414 RARNYPGTLDEAEQERWLQHRRNVFTPEFLNSYAQELEMLYGQYE-----GNAEKQALLK 468
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 469 ALFQYAQEIV 478
>gi|397164335|ref|ZP_10487790.1| exodeoxyribonuclease I [Enterobacter radicincitans DSM 16656]
gi|396093483|gb|EJI91038.1| exodeoxyribonuclease I [Enterobacter radicincitans DSM 16656]
Length = 474
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 198/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+NN SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNNNSRWDLLDVMRACYALRPDGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ P+LF+++ S R K+ + A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKAKQPKLFDYLYSHRNKQKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K E
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDMSPLLELDADALRERLYTPKADLGESA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R + N++ + +N + +K+
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRQQDAERLGINRQQCLDNLQI---LRDNPQVREKVLAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D ++YN F S D + IL P+ L ++ F + ++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQIYNGFFSDADRAAMKILLETEPRNLPALDITFADGRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RARNF TL E +RW ++R + F + + + +I++L ++ N +L
Sbjct: 410 RARNFPGTLDENEQQRWLQHRRNVFTPEY-----LQQYAEQIQALFQQHDGNSEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAEEIV 474
>gi|365850248|ref|ZP_09390714.1| exodeoxyribonuclease I [Yokenella regensburgei ATCC 43003]
gi|364567662|gb|EHM45317.1| exodeoxyribonuclease I [Yokenella regensburgei ATCC 43003]
Length = 489
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 195/374 (52%), Gaps = 22/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 129 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 188
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +I+
Sbjct: 189 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLWSHRGKHKLAALIDVPQMKPLVHISG 248
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +D
Sbjct: 249 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDVTPLLELDSDALRERLYTAKADLGDDA 308
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R + N+K + +N + K+
Sbjct: 309 AVPVKLVHLNKCP-VLAQGNTLRPEDADRLGINRQHCLDNLKL---LRDNPQVRDKVVAI 364
Query: 239 YKINNSDLEL-----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ +D E N+D +LYN F S D + I+ P+ L ++ F +K++E L
Sbjct: 365 F----ADAEPFVPSENVDAQLYNGFFSDADRAAMRIVLETEPRNLPALDITFADKRIERL 420
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDT 351
+F YRARNF TL E +RW ++R + F + Y + M Y + E N
Sbjct: 421 LFNYRARNFPGTLDEAEQQRWLEHRRNVFTPEFLQAYAQELEMLYGQYE-----GNNEKL 475
Query: 352 KILNALLMYGKSIT 365
L AL Y + I
Sbjct: 476 GQLKALWQYAQDIV 489
>gi|416107736|ref|ZP_11590703.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348005285|gb|EGY45774.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
Length = 379
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 175/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 59 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 118
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 119 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGM 178
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 179 LGNYRGNTTLIAPLTWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 238
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D +N + + IF
Sbjct: 239 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAQNRQRLQEAKDIRQKVMDIF- 296
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 297 -HQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 355
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 356 RARHFYRTLNRAEQIKWQKY 375
>gi|387814925|ref|YP_005430412.1| Exodeoxyribonuclease I, Exonuclease I, DNA
deoxyribophosphodiesterase, dRPase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|302608296|emb|CBW44754.1| Exodeoxyribonuclease I, Exonuclease I, DNA
deoxyribophosphodiesterase, dRPase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339942|emb|CCG95989.1| Exodeoxyribonuclease I, Exonuclease I, DNA
deoxyribophosphodiesterase, dRPase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 482
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 199/371 (53%), Gaps = 10/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ Y L P GI WP K +G PSF+LE L+ N +
Sbjct: 110 LYRNLRDPYAREWQNGNSRWDIIDMVRLTYALRPEGIHWPRKEDGSPSFRLEELTVANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F+L+ + K + +P F+I+
Sbjct: 170 AHEAAHDAMSDVLATIAVAKLIKEKQPKLFDFVLNNKDKHSARQMLDTAAMKPVFHISAK 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ + +L+ P+ NKN +I ++L DP+ + + +IR+ + + E +
Sbjct: 230 YPATRGCCALVAPLAESLSNKNQVIVYDLREDPEALINASVEEIRERVFTSQAELGEGVS 289
Query: 181 --PISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P+ + LN+ P++ + L LS + + D + N+ + + F
Sbjct: 290 RFPLKGVQLNKCPVLAPATMLSTLSQERLAELELDGDVLRANLAKLRKAPDLPARIAQAF 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ SDL + DE+LY FISK D KL L + + L+ FE+ +L E++F
Sbjct: 350 -EQDFQGSDL-TDPDEQLYAGGFISKTDREKLNWLLTQPVETLAEQEVRFEDARLPEMLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
YRARN+ +TL +E++RW+++R R K ++ + E++ L ++
Sbjct: 408 RYRARNYPDTLIGEEMERWEQFRTERLMQPKKGWRSLEAYGRELQRLASDPELTPKKQQV 467
Query: 354 LNALLMYGKSI 364
L L +YG+S+
Sbjct: 468 LEDLHLYGESL 478
>gi|386013703|ref|YP_005931980.1| SbcB [Pseudomonas putida BIRD-1]
gi|313500409|gb|ADR61775.1| SbcB [Pseudomonas putida BIRD-1]
Length = 477
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIQWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ ++ F++ +L EL+F Y
Sbjct: 343 IYGKDEFSPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGHWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTGEERQRWYGFCQQRLSDPQWGAPNTLGDFEKARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQ 366
++ + + +
Sbjct: 463 WQLHARQLQE 472
>gi|406596489|ref|YP_006747619.1| exodeoxyribonuclease I [Alteromonas macleodii ATCC 27126]
gi|407683441|ref|YP_006798615.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'English Channel
673']
gi|406373810|gb|AFS37065.1| exodeoxyribonuclease I [Alteromonas macleodii ATCC 27126]
gi|407245052|gb|AFT74238.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'English Channel
673']
Length = 476
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 199/371 (53%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I++ +A Y L P GI WP + +G PSFKLE L+ NN
Sbjct: 110 LFYRNFYDPYSREWRNGNSRWDIIDLARACYALRPDGINWPRREDGAPSFKLEALTAANN 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDALSDV AT+ LA+LI+ PRLF++ LSLR K+ V+ +I +I+
Sbjct: 170 IGHENAHDALSDVYATIALAKLIKEKQPRLFDYALSLRSKQTVMQQIDLTKPSVLLHISS 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+ + + P+ HP N N I +L HD + + +IR L ++F + +
Sbjct: 230 KLPASQGCCTWVMPVAKHPTNNNAFIAIDLSHDIDSLVNDTPEEIRQALYAPSDTFDDAL 289
Query: 181 P---ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ +IH+NRSP I+ K ++ + R D N K +S+ + KI
Sbjct: 290 ERPGLKLIHVNRSPF-ITTAKAMTEDNAARLGLDRERCLDNYKVLASMPE---LATKIVD 345
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + EL+ID LY F++ +D + P L+ ++ +++ L + +F
Sbjct: 346 VYDDDIQSGELDIDHALYSGGFLNDEDRRWCERVIEAQPDDLATLSEKTQHEGLRKQLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ TL+ E+ RW+ +R +R + + + + + +ESL + +++ K I
Sbjct: 406 YRARNYPNTLTADEMTRWQHHRQARLTDSAFHGSITLENYMMRLESLAHEHSDNPEKQAI 465
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 466 LRALYQYAENL 476
>gi|421522820|ref|ZP_15969460.1| exonuclease I [Pseudomonas putida LS46]
gi|402753313|gb|EJX13807.1| exonuclease I [Pseudomonas putida LS46]
Length = 477
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ ++ F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGHWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTPEERQRWYGFCQQRLSDPQWGAPNTLGDFEQARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQ 366
++ + + +
Sbjct: 463 WQLHARQLQE 472
>gi|397692989|ref|YP_006530869.1| exonuclease I [Pseudomonas putida DOT-T1E]
gi|397329719|gb|AFO46078.1| exonuclease I [Pseudomonas putida DOT-T1E]
Length = 477
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ ++ F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGHWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTPEERQRWYGFCQQRLSDPQWGAPNTLGDFEQARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQ 366
++ + + +
Sbjct: 463 WQLHARQLQE 472
>gi|395445221|ref|YP_006385474.1| exonuclease I [Pseudomonas putida ND6]
gi|388559218|gb|AFK68359.1| exonuclease I [Pseudomonas putida ND6]
Length = 477
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 196/370 (52%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ + F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGQWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTPEERQRWYDFCQQRLSDPQWGAPNTLGDFEQARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQ 366
++ + + +
Sbjct: 463 WQLHARQLQE 472
>gi|145631376|ref|ZP_01787147.1| exodeoxyribonuclease I [Haemophilus influenzae R3021]
gi|144983035|gb|EDJ90539.1| exodeoxyribonuclease I [Haemophilus influenzae R3021]
Length = 473
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETADRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|432607896|ref|ZP_19844082.1| exodeoxyribonuclease I [Escherichia coli KTE67]
gi|431138414|gb|ELE40249.1| exodeoxyribonuclease I [Escherichia coli KTE67]
Length = 475
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDIDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|26988099|ref|NP_743524.1| exonuclease I [Pseudomonas putida KT2440]
gi|24982826|gb|AAN66988.1|AE016327_3 exodeoxyribonuclease I [Pseudomonas putida KT2440]
Length = 477
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 196/371 (52%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ + F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGQWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTGEERQRWYGFCQQRLSEPQWGAPNTLGDFEKARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQK 367
++ + + ++
Sbjct: 463 WQLHARQLQER 473
>gi|410636524|ref|ZP_11347118.1| exodeoxyribonuclease I [Glaciecola lipolytica E3]
gi|410144136|dbj|GAC14323.1| exodeoxyribonuclease I [Glaciecola lipolytica E3]
Length = 480
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 189/329 (57%), Gaps = 9/329 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+RNL +PY REW+N SRWD+I++++A Y L P GI W YK++G PSFKLE L+ N
Sbjct: 113 TLYRNLHDPYAREWQNGNSRWDIIDLVRACYALRPEGINWVYKDDGTPSFKLEDLTQANQ 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH AHDALSDV AT+ +A+L++ P+L+++I +LR K+ V +I P +I+
Sbjct: 173 ISHADAHDALSDVYATIAIAKLVKQTQPKLYDYIFNLRTKRNVAEQINLESQIPLVHISS 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + + + PI HP+NKN +I NL DP+ DI +I+ L ++ NS E+
Sbjct: 233 KLPAINGCCTWILPIAYHPINKNAVICLNLALDPQPLFDLDIEQIKTRL-YQPNSELEEG 291
Query: 180 ---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+PI ++HLN+ PIV + K L+ R D N +N+ S + + K I
Sbjct: 292 QQRLPIKLLHLNKCPIV-APAKTLTEENAQRLGIDRNQCLQNLALLKSQV--SLADKLIS 348
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
L + S+ ++ D LY F+S D KL + M P L + ++ F + +L L+F
Sbjct: 349 LYSQERKSEDSIDPDYALYSGGFLSDSDRSKLTQIHQMDPTNLGSKDWGFSDPRLNTLLF 408
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYN 324
YRARN+ +LS +E+ +W+++R R +
Sbjct: 409 RYRARNYPLSLSEEEVIKWQRHRQYRLTD 437
>gi|419922306|ref|ZP_14440327.1| exonuclease I [Escherichia coli 541-15]
gi|388396674|gb|EIL57755.1| exonuclease I [Escherichia coli 541-15]
Length = 475
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L +N F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALNITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|206578810|ref|YP_002237569.1| exonuclease I [Klebsiella pneumoniae 342]
gi|206567868|gb|ACI09644.1| exodeoxyribonuclease I [Klebsiella pneumoniae 342]
Length = 474
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 199/372 (53%), Gaps = 18/372 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GITWP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGITWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVIS--NLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
PI ++HLN+ P++ L+ L ++ R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCPVLAQANTLRPLDAD---RLGISIQRCLEN---AQLLRANPQVREKVV 347
Query: 237 LDYKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F
Sbjct: 348 AVYAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI-- 353
YRARNF TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 NYRARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQ 462
Query: 354 LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LKALWQYAQDIV 474
>gi|24113393|ref|NP_707903.1| exonuclease I [Shigella flexneri 2a str. 301]
gi|30063460|ref|NP_837631.1| exonuclease I [Shigella flexneri 2a str. 2457T]
gi|384543675|ref|YP_005727738.1| deoxyribophosphodiesterase [Shigella flexneri 2002017]
gi|415855347|ref|ZP_11530751.1| exodeoxyribonuclease I [Shigella flexneri 2a str. 2457T]
gi|417702692|ref|ZP_12351804.1| exodeoxyribonuclease I [Shigella flexneri K-218]
gi|417723551|ref|ZP_12372360.1| exodeoxyribonuclease I [Shigella flexneri K-304]
gi|417728865|ref|ZP_12377569.1| exodeoxyribonuclease I [Shigella flexneri K-671]
gi|417734025|ref|ZP_12382678.1| exodeoxyribonuclease I [Shigella flexneri 2747-71]
gi|417743846|ref|ZP_12392373.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 2930-71]
gi|418256911|ref|ZP_12880620.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 6603-63]
gi|420342316|ref|ZP_14843796.1| exodeoxyribonuclease I [Shigella flexneri K-404]
gi|424838390|ref|ZP_18263027.1| exonuclease I [Shigella flexneri 5a str. M90T]
gi|24052413|gb|AAN43610.1| exonuclease I, 3 --> 5 specific; deoxyribophosphodiesterase
[Shigella flexneri 2a str. 301]
gi|30041713|gb|AAP17440.1| exonuclease I, 3 --> 5 specific; deoxyribophosphodiesterase
[Shigella flexneri 2a str. 2457T]
gi|281601461|gb|ADA74445.1| deoxyribophosphodiesterase [Shigella flexneri 2002017]
gi|313649951|gb|EFS14371.1| exodeoxyribonuclease I [Shigella flexneri 2a str. 2457T]
gi|332756645|gb|EGJ86994.1| exodeoxyribonuclease I [Shigella flexneri K-671]
gi|332756922|gb|EGJ87267.1| exodeoxyribonuclease I [Shigella flexneri 2747-71]
gi|332766358|gb|EGJ96567.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 2930-71]
gi|333002384|gb|EGK21946.1| exodeoxyribonuclease I [Shigella flexneri K-218]
gi|333017067|gb|EGK36388.1| exodeoxyribonuclease I [Shigella flexneri K-304]
gi|383467442|gb|EID62463.1| exonuclease I [Shigella flexneri 5a str. M90T]
gi|391266735|gb|EIQ25682.1| exodeoxyribonuclease I [Shigella flexneri K-404]
gi|397897381|gb|EJL13788.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 6603-63]
Length = 474
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 204/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLAHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDIDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRHQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|354597934|ref|ZP_09015951.1| Exodeoxyribonuclease I [Brenneria sp. EniD312]
gi|353675869|gb|EHD21902.1| Exodeoxyribonuclease I [Brenneria sp. EniD312]
Length = 475
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 206/371 (55%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++ ++A + L P GI WP + G PSF+LEHL+ N
Sbjct: 113 LFYRNFYDPYAYSWQHGNSRWDLLDALRACHALRPEGIVWPENDEGLPSFRLEHLTRANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PRLF+++ LR K V A I +P +++
Sbjct: 173 IAHEHAHDAMSDVYATIAMAQLLKQAQPRLFDYLFQLRNKNKVNALIDIAQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKN---SFK 177
MF + SL+ P+ HP N+N +I +L D L D + +R+ L +++ + +
Sbjct: 233 MFGAARGNTSLVAPLAWHPDNRNAVIMCDLAGDMTPLLELDADTLRERLYTRRDRLSAGQ 292
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P V++ + L R D N+ + + + I +K+
Sbjct: 293 SAVPIKLVHINKCP-VLAPVNTLRPEDADRLGIDRQRCRDNL---ALLRQYSQIREKVVA 348
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + E ++D +Y+ F D + + I++ +P+ L ++ F + +LE L+F
Sbjct: 349 LFAESPAFAAESDVDLRIYDGFFGDADRMTMKIIQQTAPQNLPALDVKFVDDRLEPLLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKIL 354
YRARNF TL E +RW ++R F ++ + + E+++L ++ ++ T ++
Sbjct: 409 YRARNFPNTLDDGEQQRWLQHRQEVFTTER-----LQQYVTELDALYQRYEGDKPKTDLI 463
Query: 355 NALLMYGKSIT 365
ALL Y +++T
Sbjct: 464 KALLAYVQALT 474
>gi|227111961|ref|ZP_03825617.1| exonuclease I [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 475
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 13/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 ISHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKISALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ + D
Sbjct: 233 MFGAARSNTSWVVPLAWHPDNRNAVIMCDLAGDMTPLLELDSAALRERLYTRRDALEADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P V++ L R D N+ S N + K + L
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNLALLRS--NASVREKVVEL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D LY+ F D + + I++ +P+ L ++ F + +LE L+F Y
Sbjct: 350 FAEAPAFTASDDVDLRLYDGFFGYADRMAMKIIQETAPQNLPALDLTFADNRLEPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL +E +RW ++R + F ++ + + E+ +L ++ + K+ L
Sbjct: 410 RARNFPGTLDDREQQRWLQHRRAVFTPER-----LQDYLSELSNLYQQHEDDKEKMAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 465 ALYAYAQELV 474
>gi|419159670|ref|ZP_13704177.1| exodeoxyribonuclease I [Escherichia coli DEC6D]
gi|378007815|gb|EHV70779.1| exodeoxyribonuclease I [Escherichia coli DEC6D]
Length = 475
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D +++R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDRLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|335420257|ref|ZP_08551295.1| exonuclease I [Salinisphaera shabanensis E1L3A]
gi|334894616|gb|EGM32801.1| exonuclease I [Salinisphaera shabanensis E1L3A]
Length = 484
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
WRN +PY REW+N CSRWD+IN+++ Y L P GI WP + +G PSFKLEHL+ N+L
Sbjct: 116 LWRNFFDPYAREWQNGCSRWDIINMVRLAYALRPEGIEWPKREDGTPSFKLEHLASANDL 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+ ++AHDALSDV AT+GLA+LIR+ P+LF+++++ R K + +P +++
Sbjct: 176 AQERAHDALSDVHATIGLAKLIRDKQPKLFDYVVNNRDKHSARKMLDMGTRKPALHVSSK 235
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
F + + +S + PI HP NKN +I ++L DP L ++I + + ED P
Sbjct: 236 FPASNGCLSPVMPIASHPNNKNCVIVYDLRVDPTPLLELPPDEIFERIFTPTADLPEDTP 295
Query: 182 ---ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ +HLN+ P V++ +++ + R D+N +N K L + K
Sbjct: 296 RVALKGVHLNKCP-VLAPFEMMRESEAARLDLDINQCRRNWKAIHDHL--AEVEAKAVAV 352
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + + + + + LY+ F+S D +R S L++ F + +L EL+F YR
Sbjct: 353 FDAHAFEPDGDAEAALYDGFVSDDDRKLADQVRRTSAADLADGPIVFADNRLNELLFRYR 412
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK 345
AR+F ETL E W + R + ++ + I L+++
Sbjct: 413 ARHFPETLVDAERDDWNNWLSKRLEFAPDGGLTLDDYDEVIAQLMQR 459
>gi|417712973|ref|ZP_12361945.1| exodeoxyribonuclease I [Shigella flexneri K-272]
gi|417717791|ref|ZP_12366695.1| exodeoxyribonuclease I [Shigella flexneri K-227]
gi|420320845|ref|ZP_14822676.1| exodeoxyribonuclease I [Shigella flexneri 2850-71]
gi|333003504|gb|EGK23045.1| exodeoxyribonuclease I [Shigella flexneri K-272]
gi|333017330|gb|EGK36648.1| exodeoxyribonuclease I [Shigella flexneri K-227]
gi|391248519|gb|EIQ07758.1| exodeoxyribonuclease I [Shigella flexneri 2850-71]
Length = 474
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLAHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDIDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRHQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|398887994|ref|ZP_10642524.1| exonuclease I, partial [Pseudomonas sp. GM55]
gi|398191538|gb|EJM78726.1| exonuclease I, partial [Pseudomonas sp. GM55]
Length = 355
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 197/359 (54%), Gaps = 11/359 (3%)
Query: 15 KNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVR 74
+ SRWDLI+V++A Y L P G+ WP + G+ + KLE L+ N + H AH+ALSDVR
Sbjct: 1 QGGNSRWDLIDVVRAAYALRPDGMVWPTDDEGRVTLKLERLTAANGIDHGNAHEALSDVR 60
Query: 75 ATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWP 134
AT+ LARLIR P+L++++ LR K+ V+ +I + +P +++ FS+ Y+ ++ P
Sbjct: 61 ATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHVSGRFSAARHYVGVVLP 118
Query: 135 ICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSP 191
+ HP NKN LI +L DP+ L D +R L +++ ED +P+ +IH+N+ P
Sbjct: 119 LAWHPRNKNALIVCDLHLDPQGLLDLDAESLRQRLYTRRDELAEDELPVPLKLIHINKCP 178
Query: 192 IVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELNI 250
V++ L VL R D+ + + + N IW+ KI Y + +
Sbjct: 179 -VVAPLSVLRQEDQQRLGLDMALYQQRV---LQLNNGRKIWQDKILAIYAREDFSPSQDP 234
Query: 251 DEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKE 310
+++LY+ FI +D +R++ P +L+ + F++++L EL+F YRARNF +TL+ +E
Sbjct: 235 EQQLYDGFIGDRDRRLCEQVRAVDPMQLAQEQWPFDDERLPELLFRYRARNFPDTLNSEE 294
Query: 311 LKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK-KANEHDTKILNALLMYGKSITQKI 368
+RW+ + R + + N ++E + L A +L+ Y + + Q++
Sbjct: 295 QERWRIFCQKRLSDPEWGAPNTLEVFVEAAAQLSVSATPFQQGVLSEWQDYVQGLRQRL 353
>gi|419801602|ref|ZP_14326826.1| exodeoxyribonuclease I [Haemophilus parainfluenzae HK262]
gi|385193518|gb|EIF40880.1| exodeoxyribonuclease I [Haemophilus parainfluenzae HK262]
Length = 473
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 177/322 (54%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
HK AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 EHKNAHDAMADVYATIAMAKLIKEKQPKLFQFFFEHRGKKEIEKLIDTAEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L D L +R L KK+ +E
Sbjct: 232 LGNYRGNCAWVAPLAWHPTNQNAVIVCDLSGDIDNLLSKSAVDLRQDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D N+ L+ +IF
Sbjct: 292 SSVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRQQCLDNLAKLRQSLDIREKVIEIFS 350
Query: 238 DYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + SD N++ ELYN F S D +AILR + P+KL+ FE+K++ EL+F
Sbjct: 351 EEREFEPSD---NVETELYNGFFSNADKNNMAILRDLPPEKLAEHGLAFEDKRIPELLFH 407
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 408 YRARHFYKTLNRAEQIKWQKYR 429
>gi|429096851|ref|ZP_19158957.1| Exodeoxyribonuclease I [Cronobacter dublinensis 582]
gi|426283191|emb|CCJ85070.1| Exodeoxyribonuclease I [Cronobacter dublinensis 582]
Length = 475
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVHATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDIVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + PI HP N+N +I +L D L D + +R+ L K + +D
Sbjct: 234 MFGAWRGNTSWIAPIAWHPDNRNAVIVVDLAGDISPLLELDADALRERLYTPKAALGDDS 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK-IFL 237
+P+ ++HLN+ P V++ L R D N+K + + + +K + L
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKV---LRDAPQVREKLVAL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAQPFPPTSNVDAQLYDGFFSDADRAAMRIVLQTPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEPEQQRWLNHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALYQYAQEIV 474
>gi|419164806|ref|ZP_13709263.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC6E]
gi|378010888|gb|EHV73833.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC6E]
Length = 474
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D +++R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDRLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|238755403|ref|ZP_04616744.1| Exodeoxyribonuclease I [Yersinia ruckeri ATCC 29473]
gi|238706340|gb|EEP98716.1| Exodeoxyribonuclease I [Yersinia ruckeri ATCC 29473]
Length = 476
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 178/322 (55%), Gaps = 8/322 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGIIWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ LA+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVHATIALAKLVKQAQPRLFDYLYQHRSKHKISALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D +R+ L +++ D
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDISPLLELDAETLRERLYTRRDKLSADQ 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L+ N R D +N++ + N I +K+
Sbjct: 294 AAVPIKLVHINKCPVLAPAKTLLAENAE-RLAIDRQRCLQNLQV---LRQNPQIREKVVT 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + ++D +LY+ F D + I++ +P+ L ++ F++ +L EL+F
Sbjct: 350 LFAESPPFAASSDVDAQLYDGFFGDADRATMKIIQQTAPQNLPALDLSFQDPRLTELLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYR 318
+RARN+ TL E +RW+ +R
Sbjct: 410 FRARNYPNTLDDSEQRRWQNHR 431
>gi|326795181|ref|YP_004313001.1| exodeoxyribonuclease I [Marinomonas mediterranea MMB-1]
gi|326545945|gb|ADZ91165.1| Exodeoxyribonuclease I [Marinomonas mediterranea MMB-1]
Length = 482
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 201/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N CSRWD+I++++ Y + P GI WP + GK S KLE L+ N L
Sbjct: 114 FYRNFIDPYAREWQNKCSRWDVIDLVRMTYAMRPDGIKWPKNDEGKVSLKLELLTKANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H++AHDALSDV T+ +A+LIR+ P+LF++ +R K + I +PF +I+ M
Sbjct: 174 AHEQAHDALSDVYGTIAIAKLIRDTQPKLFDYYAKMRHKSELQQFIDPYRMKPFLHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
F + + + P+ HP NKN +I ++L+ D + + +IR + E
Sbjct: 234 FGLDKKFAAFVAPLAPHPSNKNGIIVYDLMEDATPLVTLTVEEIRQRVFSTTEELGELTR 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IWKKIFLD 238
+P+ +IHLNR+P V + +++++ R D + N+ SIL +T + K+
Sbjct: 294 LPLKVIHLNRAPAVAPATFLKAADVVERLALDGDVCRTNL----SILKSTQELVAKLSKV 349
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ ++ + D LY F S++D ++ +RS + L + F++++L E+ Y
Sbjct: 350 FEQEERRIDKDPDTMLYSGGFFSREDKQRMEEIRSTPIEALGEIEMAFDDRRLPEMFMRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNK-KNNLYNINMFYLEIESLLKKANEHDTK--IL 354
RN+ + LS ++ + W++YR +R N +++ F+ + L + +K +L
Sbjct: 410 LGRNYPDQLSEQQREEWEEYRQTRLLNADGGGTIHMDAFFARLNELAQDEELTASKRLML 469
Query: 355 NALLMYGKSI 364
L Y +SI
Sbjct: 470 QDLSDYAQSI 479
>gi|383189532|ref|YP_005199660.1| exonuclease I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371587790|gb|AEX51520.1| exonuclease I [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 526
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 201/374 (53%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 164 ILYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGFPSFRLEHLTKANG 223
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+F+L R K + I P P +++
Sbjct: 224 IEHENAHDAMADVYATIAMAKLVKQAQPRLFSFLLEHRSKHKLNILIDIPAMGPLVHVSG 283
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP NKN +I +L D L + +++R+ L ++++ +
Sbjct: 284 MFGAARGNTAWVAPLAWHPENKNAVIMCDLAGDMTTLLDLNPDEMRERLYSRRDTLQSGQ 343
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+PI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 344 SPLPIKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLENLQL---LRQNPQVREKVVT 399
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD ++D LY+ F S D + I+ P+ L ++ F + ++E L
Sbjct: 400 LFAEAEPFTPSD---DVDARLYDGFFSDADRAAMRIILETRPENLPALDLTFNDSRIEPL 456
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDT 351
+F +RARN+ TL+ E KRW +R ++ +++ + LE+ESL L + N
Sbjct: 457 LFRFRARNYPATLTDAEQKRWMAHRQTKLTDER-----FQNYALELESLYNLHEGNVEKM 511
Query: 352 KILNALLMYGKSIT 365
+L AL YGK +
Sbjct: 512 ALLKALFEYGKKLV 525
>gi|148549564|ref|YP_001269666.1| exonuclease I [Pseudomonas putida F1]
gi|148513622|gb|ABQ80482.1| Exodeoxyribonuclease I subunit C [Pseudomonas putida F1]
Length = 477
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 195/370 (52%), Gaps = 12/370 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHDELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL + N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VVAPLSVLRPVDQQRLGLDLTLLQSR---GEQLANQQAQWQEKLEH 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY FI +D +R++ P +LS+ + F++ +L EL+F Y
Sbjct: 343 IYGKDEFAPSEDPEQQLYEGFIGDRDRRLCEQVRALEPAQLSHGQWMFDDPRLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ +E +RW + R + N + F + + A+E ++L A
Sbjct: 403 RARNFPETLTPEERQRWYDFCQQRLSEPQWGAPNTLGDFEQARQQAWEGADEAGRRVLEA 462
Query: 357 LLMYGKSITQ 366
++ + + +
Sbjct: 463 WQLHARQLQE 472
>gi|417828341|ref|ZP_12474897.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri J1713]
gi|335575332|gb|EGM61628.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri J1713]
Length = 474
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLAHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDIDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRHQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|425075880|ref|ZP_18478983.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086516|ref|ZP_18489609.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425092393|ref|ZP_18495478.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|405593860|gb|EKB67296.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405605431|gb|EKB78497.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405611619|gb|EKB84385.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
Length = 474
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 195/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAQDIV 474
>gi|384257405|ref|YP_005401339.1| exonuclease I [Rahnella aquatilis HX2]
gi|380753381|gb|AFE57772.1| exonuclease I [Rahnella aquatilis HX2]
Length = 475
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 200/374 (53%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 ILYRNFYDPYAYSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGFPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+F+L R K + I P P +++
Sbjct: 173 IEHENAHDAMADVYATIAMAKLVKQAQPRLFSFLLEHRSKHKLNTLIDIPAMAPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP NKN +I +L D L + +++R+ L ++ + +
Sbjct: 233 MFGAARGNTAWVAPLAWHPENKNAVIMCDLAGDMSTLLDLNPDEMRERLYSRREALQAGQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 293 SPLPVKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLENLQL---LRQNPQVREKVVT 348
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD ++D LY+ F S D + I+ P+ L ++ F + ++E L
Sbjct: 349 MFAEAEPFTPSD---DVDARLYDGFFSDADRAAMRIIVETRPENLPALDLTFNDSRIEPL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDT 351
+F +RARN+ TL+ E KRW +R + +++ + + LE+ESL L + +
Sbjct: 406 LFRFRARNYPATLTDAEQKRWMLHRQEKLTDER-----VQAYILELESLYNLHEGDVEKM 460
Query: 352 KILNALLMYGKSIT 365
+L AL YGK +
Sbjct: 461 ALLKALFEYGKKLV 474
>gi|145632876|ref|ZP_01788609.1| exodeoxyribonuclease I [Haemophilus influenzae 3655]
gi|145634313|ref|ZP_01790023.1| exodeoxyribonuclease I [Haemophilus influenzae PittAA]
gi|229844163|ref|ZP_04464304.1| exonuclease I [Haemophilus influenzae 6P18H1]
gi|319776340|ref|YP_004138828.1| exonuclease I [Haemophilus influenzae F3047]
gi|329123492|ref|ZP_08252056.1| exodeoxyribonuclease I [Haemophilus aegyptius ATCC 11116]
gi|144986532|gb|EDJ93098.1| exodeoxyribonuclease I [Haemophilus influenzae 3655]
gi|145268293|gb|EDK08287.1| exodeoxyribonuclease I [Haemophilus influenzae PittAA]
gi|229813157|gb|EEP48845.1| exonuclease I [Haemophilus influenzae 6P18H1]
gi|317450931|emb|CBY87157.1| exonuclease I [Haemophilus influenzae F3047]
gi|327471074|gb|EGF16529.1| exodeoxyribonuclease I [Haemophilus aegyptius ATCC 11116]
Length = 473
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|148826847|ref|YP_001291600.1| exonuclease I [Haemophilus influenzae PittGG]
gi|148718089|gb|ABQ99216.1| exodeoxyribonuclease I [Haemophilus influenzae PittGG]
Length = 473
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGTMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|229846770|ref|ZP_04466877.1| exonuclease I [Haemophilus influenzae 7P49H1]
gi|229810259|gb|EEP45978.1| exonuclease I [Haemophilus influenzae 7P49H1]
Length = 473
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|422833928|ref|ZP_16881992.1| exodeoxyribonuclease I [Escherichia coli E101]
gi|371603355|gb|EHN92010.1| exodeoxyribonuclease I [Escherichia coli E101]
Length = 475
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AIPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|407687434|ref|YP_006802607.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407290814|gb|AFT95126.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 476
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 199/371 (53%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I++ +A Y L P GI WP + +G PSFKLE L+ NN
Sbjct: 110 LFYRNFYDPYSREWRNGNSRWDIIDLARACYALRPDGINWPRREDGAPSFKLEALTAANN 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDALSDV AT+ LA+LI+ PRLF++ LSLR K V+ +I +I+
Sbjct: 170 IGHENAHDALSDVYATIALAKLIKEKQPRLFDYALSLRSKHTVMQQIELTKPSVLLHISS 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+ + + P+ HP N N I +L HD + + +IR L ++F + +
Sbjct: 230 KLPASQGCCTWVMPVAKHPTNSNAFIAIDLSHDIDSLVNDTPEEIRQALYAPSDTFDDAL 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ +IH+NRSP I+ K ++ + R D N K +S+ + KI
Sbjct: 290 ERPGLKLIHVNRSPF-ITTAKAMTEDNAGRLGLDRERCLDNYKVLASMPE---LATKIVD 345
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + EL+ID LY F++++D + P L+ ++ +++ L + +F
Sbjct: 346 VYDDDIQSGELDIDHALYSGGFLNEEDRRWCERVIEAQPDDLATLSEKTQHEGLRKQLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ TL+ E+ RW+ +R +R + + + + + +ESL + +++ K I
Sbjct: 406 YRARNYPNTLTADEMTRWQHHRQARLTDSAFHGSITLENYMMRLESLAHEYSDNPEKQAI 465
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 466 LRALYQYAENL 476
>gi|403058208|ref|YP_006646425.1| hypothetical protein PCC21_017690 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805534|gb|AFR03172.1| hypothetical protein PCC21_017690 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 475
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 182/329 (55%), Gaps = 6/329 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 ISHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKISALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ + D
Sbjct: 233 MFGAARSNTSWVVPLAWHPDNRNAVIMCDLAGDMTPLLELDSAALRERLYTRRDALEADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P V++ L R D N+ S N + K + L
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNLALLRS--NASVREKVVEL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D LY+ F D + + I++ +P+ L ++ F + +LE L+F Y
Sbjct: 350 FAEAPAFTASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKK 326
RARNF TL +E +RW ++R + F ++
Sbjct: 410 RARNFPGTLDDREQQRWLQHRRAVFTPER 438
>gi|423109202|ref|ZP_17096897.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5243]
gi|376383396|gb|EHS96124.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5243]
Length = 474
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLDLDADALRERLYTPKSELGDLA 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ +N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLEN---AQRLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 YAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIILETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|419227201|ref|ZP_13770059.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9A]
gi|419232988|ref|ZP_13775765.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9B]
gi|419238263|ref|ZP_13780986.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9C]
gi|419243731|ref|ZP_13786370.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9D]
gi|419249558|ref|ZP_13792143.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9E]
gi|419261567|ref|ZP_13803989.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10B]
gi|419273069|ref|ZP_13815369.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10D]
gi|419904468|ref|ZP_14423465.1| exonuclease I [Escherichia coli O26:H11 str. CVM9942]
gi|420114784|ref|ZP_14624405.1| exonuclease I [Escherichia coli O26:H11 str. CVM10021]
gi|378074714|gb|EHW36743.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9A]
gi|378077515|gb|EHW39509.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9B]
gi|378084465|gb|EHW46373.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9C]
gi|378090809|gb|EHW52644.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9D]
gi|378095604|gb|EHW57389.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC9E]
gi|378106616|gb|EHW68244.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10B]
gi|378117010|gb|EHW78527.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10D]
gi|388367505|gb|EIL31181.1| exonuclease I [Escherichia coli O26:H11 str. CVM9942]
gi|394408265|gb|EJE82953.1| exonuclease I [Escherichia coli O26:H11 str. CVM10021]
Length = 474
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|188495966|ref|ZP_03003236.1| exodeoxyribonuclease I [Escherichia coli 53638]
gi|432377186|ref|ZP_19620177.1| exodeoxyribonuclease I [Escherichia coli KTE12]
gi|432576291|ref|ZP_19812752.1| exodeoxyribonuclease I [Escherichia coli KTE56]
gi|433135269|ref|ZP_20320619.1| exodeoxyribonuclease I [Escherichia coli KTE166]
gi|188491165|gb|EDU66268.1| exodeoxyribonuclease I [Escherichia coli 53638]
gi|430898485|gb|ELC20618.1| exodeoxyribonuclease I [Escherichia coli KTE12]
gi|431115210|gb|ELE18734.1| exodeoxyribonuclease I [Escherichia coli KTE56]
gi|431656948|gb|ELJ23921.1| exodeoxyribonuclease I [Escherichia coli KTE166]
Length = 475
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|227329384|ref|ZP_03833408.1| exonuclease I [Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 475
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 191/345 (55%), Gaps = 16/345 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQNGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L + P+LF+++ LR K + A I P +P +++
Sbjct: 173 IAHEQAHDAMSDVYATIAMAKLFKQAQPKLFDYLFPLRNKNKISALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ + +
Sbjct: 233 MFGAARSNTSWVVPLAWHPDNRNAVIMCDLAGDMTPLLELDSEALRERLYTRRDALEANQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P V++ L R D N+ + + NN + +K+
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNL---AVLRNNASVREKVVE 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D LY+ F D + + I++ +P+ L ++ F + +LE L F
Sbjct: 349 LFADASAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLFFR 408
Query: 297 YRARNFIETLSYKELKRWKKYR--------ISRFYNKKNNLYNIN 333
YRARNF TL +E +RW ++R + + ++ NNLY ++
Sbjct: 409 YRARNFPGTLDDREQQRWLQHRRAVFTPEHLQSYLSELNNLYQLH 453
>gi|378697614|ref|YP_005179572.1| exonuclease I [Haemophilus influenzae 10810]
gi|301170130|emb|CBW29734.1| exonuclease I [Haemophilus influenzae 10810]
Length = 473
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 189/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA+ DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMEDVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLTKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|417126550|ref|ZP_11974104.1| exodeoxyribonuclease I [Escherichia coli 97.0246]
gi|386144800|gb|EIG91264.1| exodeoxyribonuclease I [Escherichia coli 97.0246]
Length = 474
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 203/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|300816639|ref|ZP_07096860.1| exonuclease [Escherichia coli MS 107-1]
gi|415874828|ref|ZP_11541737.1| exodeoxyribonuclease I [Escherichia coli MS 79-10]
gi|432809673|ref|ZP_20043566.1| exodeoxyribonuclease I [Escherichia coli KTE101]
gi|432968110|ref|ZP_20157025.1| exodeoxyribonuclease I [Escherichia coli KTE203]
gi|300530869|gb|EFK51931.1| exonuclease [Escherichia coli MS 107-1]
gi|342929759|gb|EGU98481.1| exodeoxyribonuclease I [Escherichia coli MS 79-10]
gi|431362441|gb|ELG49019.1| exodeoxyribonuclease I [Escherichia coli KTE101]
gi|431471227|gb|ELH51120.1| exodeoxyribonuclease I [Escherichia coli KTE203]
Length = 475
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|392979841|ref|YP_006478429.1| exonuclease I [Enterobacter cloacae subsp. dissolvens SDM]
gi|392325774|gb|AFM60727.1| exonuclease I [Enterobacter cloacae subsp. dissolvens SDM]
Length = 474
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K++ +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKDALGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFMPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + + Y + M Y + E NE +L
Sbjct: 410 RARNYPGTLDEAEQERWLQHRRNVFTPEYLHGYAQELEMLYGQYE-----GNEEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALFKYVQEIV 474
>gi|145641395|ref|ZP_01796974.1| exodeoxyribonuclease I [Haemophilus influenzae R3021]
gi|145273938|gb|EDK13805.1| exodeoxyribonuclease I [Haemophilus influenzae 22.4-21]
Length = 430
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 197/365 (53%), Gaps = 14/365 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 69 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 128
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + + P +++ M
Sbjct: 129 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGVMAPLVHVSGM 188
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 189 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRANLYTKKSELEERSV 248
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 249 PPVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVTDIFN 307
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 308 EERQFASN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 365
Query: 298 RARNFIETLSYKELKRWKKYRISR-------FYNKKNNLYNINMFYLEIESLLKKANEHD 350
RAR+F +TL+ E +W+KYR ++ F + L + E SLL++ E+
Sbjct: 366 RARHFYKTLTRAEQIKWQKYRQNKLEKSAVDFESSLQRLAEEHSDNPEKLSLLQQVYEYG 425
Query: 351 TKILN 355
TK+L
Sbjct: 426 TKLLG 430
>gi|387507315|ref|YP_006159571.1| exonuclease I [Escherichia coli O55:H7 str. RM12579]
gi|419045999|ref|ZP_13592941.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3A]
gi|419051640|ref|ZP_13598518.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3B]
gi|419057646|ref|ZP_13604457.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3C]
gi|419063141|ref|ZP_13609875.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3D]
gi|419076041|ref|ZP_13621566.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3F]
gi|419092962|ref|ZP_13638252.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4C]
gi|419109979|ref|ZP_13655041.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4F]
gi|419115306|ref|ZP_13660325.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5A]
gi|419120941|ref|ZP_13665901.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5B]
gi|419126507|ref|ZP_13671394.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5C]
gi|419131996|ref|ZP_13676835.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5D]
gi|420281047|ref|ZP_14783286.1| exonuclease [Escherichia coli TW06591]
gi|420315780|ref|ZP_14817658.1| exonuclease [Escherichia coli EC1734]
gi|421831399|ref|ZP_16266692.1| exonuclease [Escherichia coli PA7]
gi|423721734|ref|ZP_17695913.1| exonuclease [Escherichia coli PA31]
gi|424077994|ref|ZP_17815011.1| exonuclease [Escherichia coli FDA505]
gi|424110409|ref|ZP_17844681.1| exonuclease [Escherichia coli 93-001]
gi|424122511|ref|ZP_17855873.1| exonuclease [Escherichia coli PA5]
gi|424128588|ref|ZP_17861526.1| exonuclease [Escherichia coli PA9]
gi|424141434|ref|ZP_17873364.1| exonuclease [Escherichia coli PA14]
gi|424147867|ref|ZP_17879280.1| exonuclease [Escherichia coli PA15]
gi|424153733|ref|ZP_17884725.1| exonuclease [Escherichia coli PA24]
gi|424450208|ref|ZP_17901946.1| exonuclease [Escherichia coli PA32]
gi|424456377|ref|ZP_17907558.1| exonuclease [Escherichia coli PA33]
gi|424475672|ref|ZP_17925029.1| exonuclease [Escherichia coli PA42]
gi|424481356|ref|ZP_17930372.1| exonuclease [Escherichia coli TW07945]
gi|424487527|ref|ZP_17936129.1| exonuclease [Escherichia coli TW09098]
gi|424514434|ref|ZP_17959181.1| exonuclease [Escherichia coli TW14313]
gi|424526661|ref|ZP_17970407.1| exonuclease [Escherichia coli EC4421]
gi|424532828|ref|ZP_17976199.1| exonuclease [Escherichia coli EC4422]
gi|424538858|ref|ZP_17981836.1| exonuclease [Escherichia coli EC4013]
gi|424557279|ref|ZP_17998731.1| exonuclease [Escherichia coli EC4436]
gi|424563620|ref|ZP_18004655.1| exonuclease [Escherichia coli EC4437]
gi|425156483|ref|ZP_18555779.1| exonuclease [Escherichia coli PA34]
gi|425163032|ref|ZP_18561927.1| exonuclease [Escherichia coli FDA506]
gi|425168636|ref|ZP_18567148.1| exonuclease [Escherichia coli FDA507]
gi|425174716|ref|ZP_18572855.1| exonuclease [Escherichia coli FDA504]
gi|425186982|ref|ZP_18584299.1| exonuclease [Escherichia coli FRIK1997]
gi|425218503|ref|ZP_18613509.1| exonuclease [Escherichia coli PA23]
gi|425225028|ref|ZP_18619543.1| exonuclease [Escherichia coli PA49]
gi|425231319|ref|ZP_18625399.1| exonuclease [Escherichia coli PA45]
gi|425237355|ref|ZP_18631090.1| exonuclease [Escherichia coli TT12B]
gi|425249612|ref|ZP_18642576.1| exonuclease [Escherichia coli 5905]
gi|425267785|ref|ZP_18659434.1| exonuclease [Escherichia coli 5412]
gi|425311829|ref|ZP_18701044.1| exonuclease [Escherichia coli EC1735]
gi|425317783|ref|ZP_18706605.1| exonuclease [Escherichia coli EC1736]
gi|425323877|ref|ZP_18712281.1| exonuclease [Escherichia coli EC1737]
gi|425411561|ref|ZP_18793365.1| exonuclease [Escherichia coli NE098]
gi|425417860|ref|ZP_18799168.1| exonuclease [Escherichia coli FRIK523]
gi|425429181|ref|ZP_18809831.1| exonuclease [Escherichia coli 0.1304]
gi|429078917|ref|ZP_19142070.1| exodeoxyribonuclease I [Escherichia coli 99.0713]
gi|374359309|gb|AEZ41016.1| exonuclease I [Escherichia coli O55:H7 str. RM12579]
gi|377894318|gb|EHU58742.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3A]
gi|377894493|gb|EHU58913.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3B]
gi|377905730|gb|EHU69990.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3C]
gi|377910868|gb|EHU75052.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3D]
gi|377922392|gb|EHU86379.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3F]
gi|377943152|gb|EHV06874.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4C]
gi|377957900|gb|EHV21425.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4F]
gi|377961101|gb|EHV24575.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5A]
gi|377967803|gb|EHV31205.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5B]
gi|377975641|gb|EHV38960.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5C]
gi|377975878|gb|EHV39190.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC5D]
gi|390644564|gb|EIN23811.1| exonuclease [Escherichia coli FDA505]
gi|390661922|gb|EIN39567.1| exonuclease [Escherichia coli 93-001]
gi|390682437|gb|EIN58200.1| exonuclease [Escherichia coli PA5]
gi|390684697|gb|EIN60303.1| exonuclease [Escherichia coli PA9]
gi|390702179|gb|EIN76390.1| exonuclease [Escherichia coli PA15]
gi|390702509|gb|EIN76661.1| exonuclease [Escherichia coli PA14]
gi|390725659|gb|EIN98153.1| exonuclease [Escherichia coli PA24]
gi|390744081|gb|EIO15013.1| exonuclease [Escherichia coli PA32]
gi|390744098|gb|EIO15029.1| exonuclease [Escherichia coli PA31]
gi|390746555|gb|EIO17263.1| exonuclease [Escherichia coli PA33]
gi|390770405|gb|EIO39261.1| exonuclease [Escherichia coli PA42]
gi|390781879|gb|EIO49548.1| exonuclease [Escherichia coli TW06591]
gi|390793034|gb|EIO60380.1| exonuclease [Escherichia coli TW07945]
gi|390808020|gb|EIO74868.1| exonuclease [Escherichia coli TW09098]
gi|390849066|gb|EIP12513.1| exonuclease [Escherichia coli TW14313]
gi|390851346|gb|EIP14638.1| exonuclease [Escherichia coli EC4421]
gi|390861814|gb|EIP24043.1| exonuclease [Escherichia coli EC4422]
gi|390866640|gb|EIP28588.1| exonuclease [Escherichia coli EC4013]
gi|390884356|gb|EIP44685.1| exonuclease [Escherichia coli EC4436]
gi|390895332|gb|EIP54804.1| exonuclease [Escherichia coli EC4437]
gi|390908285|gb|EIP67115.1| exonuclease [Escherichia coli EC1734]
gi|408066160|gb|EKH00623.1| exonuclease [Escherichia coli PA7]
gi|408072887|gb|EKH07199.1| exonuclease [Escherichia coli PA34]
gi|408078620|gb|EKH12748.1| exonuclease [Escherichia coli FDA506]
gi|408083339|gb|EKH17205.1| exonuclease [Escherichia coli FDA507]
gi|408092540|gb|EKH25726.1| exonuclease [Escherichia coli FDA504]
gi|408104957|gb|EKH37176.1| exonuclease [Escherichia coli FRIK1997]
gi|408139362|gb|EKH68973.1| exonuclease [Escherichia coli PA23]
gi|408141342|gb|EKH70811.1| exonuclease [Escherichia coli PA49]
gi|408147001|gb|EKH76046.1| exonuclease [Escherichia coli PA45]
gi|408155521|gb|EKH83829.1| exonuclease [Escherichia coli TT12B]
gi|408164578|gb|EKH92370.1| exonuclease [Escherichia coli 5905]
gi|408183279|gb|EKI09731.1| exonuclease [Escherichia coli 5412]
gi|408228812|gb|EKI52332.1| exonuclease [Escherichia coli EC1735]
gi|408239565|gb|EKI62312.1| exonuclease [Escherichia coli EC1736]
gi|408243863|gb|EKI66356.1| exonuclease [Escherichia coli EC1737]
gi|408327315|gb|EKJ43041.1| exonuclease [Escherichia coli NE098]
gi|408337601|gb|EKJ52301.1| exonuclease [Escherichia coli FRIK523]
gi|408347339|gb|EKJ61552.1| exonuclease [Escherichia coli 0.1304]
gi|427329819|gb|EKW91124.1| exodeoxyribonuclease I [Escherichia coli 99.0713]
Length = 474
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|333908312|ref|YP_004481898.1| exodeoxyribonuclease I [Marinomonas posidonica IVIA-Po-181]
gi|333478318|gb|AEF54979.1| Exodeoxyribonuclease I [Marinomonas posidonica IVIA-Po-181]
Length = 484
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 186/330 (56%), Gaps = 6/330 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+NNCSRWD+I++++ Y + P GI WP K +G+ S KLE L+ NN+
Sbjct: 114 FYRNFIDPYAREWQNNCSRWDMIDLVRMTYAMRPDGIVWPKKEDGQVSMKLEDLTKANNI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H++AHDALSDV T+ +A+LI++ P+LF + +R+K + I +PF +I+ M
Sbjct: 174 AHEQAHDALSDVYGTIEIAKLIQDKQPKLFAYYFKMRQKHELQQFIDPVRMKPFLHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
F Y + + P+ HP NKN +I W+L+ D + L + +I+ + +++ +
Sbjct: 234 FGQARHYAAFVVPVAPHPTNKNGIIVWDLMEDAQPLLELSVKEIQHRVFTRQDELGDISR 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +IH NR+P V + ++ R D + N+ + I +T + K+ +
Sbjct: 294 LPLKVIHYNRAPAVAPATFLKDEQIVNRLGLDGDKCRHNL---AMIKQHTGLAAKLSDVF 350
Query: 240 KINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
++ + D LY F S++D ++ +RS + L+ ++ F++++L E++ Y
Sbjct: 351 VQEERTIDKDPDLMLYSGGFFSREDKTRMDTIRSTPAEHLTELSLSFDDRRLPEMLTRYI 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNN 328
RN+ E L+ ++ + W++YR R
Sbjct: 411 GRNYPEQLTEQQRQEWEEYRQIRLLETDGG 440
>gi|332141096|ref|YP_004426834.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Deep ecotype']
gi|327551118|gb|AEA97836.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Deep ecotype']
Length = 478
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 200/371 (53%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I+V +A Y L P GI WP + +G PSF+LE L+ NN
Sbjct: 112 LFYRNFYDPYSREWRNGNSRWDIIDVARACYALRPDGINWPLREDGSPSFRLEALTAANN 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DV AT+ LA+LI+ PRLF++ LSLR K V+ +I +I+
Sbjct: 172 IGHDNAHDALNDVYATISLAKLIKEKQPRLFDYALSLRNKHSVMQQIDLSKPSVLLHISS 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
+ + + PI HP N N I +L HD L + ++I+ L +++ +
Sbjct: 232 KLPASQGCCTWVMPIAKHPTNSNAFIVIDLSHDIDSVLNDSADEIKQALYAPSDTYDDAR 291
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
E + +IH+NRSP I+ K ++ + R D N K +S + + KI
Sbjct: 292 ERPGLKLIHVNRSPF-ITTAKAMTEDNAERLGLDRERCLDNYKKLASTPD---LVSKIVA 347
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y+ EL+ID LY F+S +D + + P+ L+ +++ L++L+F
Sbjct: 348 IYEEERHSSELDIDHALYSGGFLSDEDRRWCENVINAKPEDLATFGDKTQHEGLKKLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ TLS E+ +W+ +R +R + + + + + +ESL + +++ K I
Sbjct: 408 YRARNYPNTLSADEMTKWQYHRQARLTDSDFHGSITLETYMMRLESLAHEHSDNPEKQAI 467
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 468 LRALYQYAENL 478
>gi|15832067|ref|NP_310840.1| exonuclease I [Escherichia coli O157:H7 str. Sakai]
gi|168764097|ref|ZP_02789104.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4501]
gi|217329517|ref|ZP_03445596.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. TW14588]
gi|291283248|ref|YP_003500066.1| Exonuclease I [Escherichia coli O55:H7 str. CB9615]
gi|387883162|ref|YP_006313464.1| exonuclease I [Escherichia coli Xuzhou21]
gi|416315090|ref|ZP_11659098.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. 1044]
gi|416324821|ref|ZP_11665485.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. 1125]
gi|416786525|ref|ZP_11879044.1| exonuclease I [Escherichia coli O157:H- str. 493-89]
gi|416797963|ref|ZP_11883965.1| exonuclease I [Escherichia coli O157:H- str. H 2687]
gi|416808941|ref|ZP_11888628.1| exonuclease I [Escherichia coli O55:H7 str. 3256-97]
gi|416819366|ref|ZP_11893187.1| exonuclease I [Escherichia coli O55:H7 str. USDA 5905]
gi|416829905|ref|ZP_11898500.1| exonuclease I [Escherichia coli O157:H7 str. LSU-61]
gi|419137007|ref|ZP_13681804.1| exodeoxyribonuclease I [Escherichia coli DEC5E]
gi|421818780|ref|ZP_16254282.1| exodeoxyribonuclease I [Escherichia coli 10.0821]
gi|425098554|ref|ZP_18501317.1| exodeoxyribonuclease I [Escherichia coli 3.4870]
gi|425104689|ref|ZP_18507026.1| exodeoxyribonuclease I [Escherichia coli 5.2239]
gi|425110568|ref|ZP_18512528.1| exonuclease [Escherichia coli 6.0172]
gi|425126388|ref|ZP_18527601.1| exodeoxyribonuclease I [Escherichia coli 8.0586]
gi|425132225|ref|ZP_18533098.1| exodeoxyribonuclease I [Escherichia coli 8.2524]
gi|425144598|ref|ZP_18544617.1| exodeoxyribonuclease I [Escherichia coli 10.0869]
gi|425150596|ref|ZP_18550247.1| exodeoxyribonuclease I [Escherichia coli 88.0221]
gi|425212397|ref|ZP_18607833.1| exonuclease [Escherichia coli PA4]
gi|428953676|ref|ZP_19025500.1| exodeoxyribonuclease I [Escherichia coli 88.1042]
gi|428959603|ref|ZP_19030951.1| exodeoxyribonuclease I [Escherichia coli 89.0511]
gi|428978539|ref|ZP_19048391.1| exodeoxyribonuclease I [Escherichia coli 90.2281]
gi|428984371|ref|ZP_19053791.1| exodeoxyribonuclease I [Escherichia coli 93.0055]
gi|428990436|ref|ZP_19059453.1| exodeoxyribonuclease I [Escherichia coli 93.0056]
gi|428996232|ref|ZP_19064874.1| exodeoxyribonuclease I [Escherichia coli 94.0618]
gi|429008543|ref|ZP_19076112.1| exodeoxyribonuclease I [Escherichia coli 95.1288]
gi|429015067|ref|ZP_19082001.1| exodeoxyribonuclease I [Escherichia coli 95.0943]
gi|429020962|ref|ZP_19087510.1| exodeoxyribonuclease I [Escherichia coli 96.0428]
gi|429045286|ref|ZP_19110025.1| exodeoxyribonuclease I [Escherichia coli 96.0107]
gi|429049247|ref|ZP_19113889.1| exodeoxyribonuclease I [Escherichia coli 97.0003]
gi|429055901|ref|ZP_19120271.1| exodeoxyribonuclease I [Escherichia coli 97.1742]
gi|429060342|ref|ZP_19124450.1| exodeoxyribonuclease I [Escherichia coli 97.0007]
gi|429067711|ref|ZP_19131215.1| exodeoxyribonuclease I [Escherichia coli 99.0672]
gi|429826911|ref|ZP_19358003.1| exodeoxyribonuclease I [Escherichia coli 96.0109]
gi|429833216|ref|ZP_19363645.1| exodeoxyribonuclease I [Escherichia coli 97.0010]
gi|444958806|ref|ZP_21276686.1| exodeoxyribonuclease I [Escherichia coli 99.1753]
gi|444963979|ref|ZP_21281623.1| exodeoxyribonuclease I [Escherichia coli 99.1775]
gi|444986049|ref|ZP_21302846.1| exodeoxyribonuclease I [Escherichia coli PA11]
gi|445000906|ref|ZP_21317348.1| exodeoxyribonuclease I [Escherichia coli PA2]
gi|445017162|ref|ZP_21333194.1| exodeoxyribonuclease I [Escherichia coli PA8]
gi|445029342|ref|ZP_21345040.1| exodeoxyribonuclease I [Escherichia coli 99.1781]
gi|445033478|ref|ZP_21349078.1| exodeoxyribonuclease I [Escherichia coli 99.1762]
gi|445051224|ref|ZP_21366299.1| exodeoxyribonuclease I [Escherichia coli 95.0083]
gi|445055613|ref|ZP_21370541.1| exodeoxyribonuclease I [Escherichia coli 99.0670]
gi|13362281|dbj|BAB36236.1| exonuclease I [Escherichia coli O157:H7 str. Sakai]
gi|189365832|gb|EDU84248.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4501]
gi|217317285|gb|EEC25714.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. TW14588]
gi|226237418|dbj|BAH46940.1| exonuclease I [Escherichia coli O55:H7]
gi|290763121|gb|ADD57082.1| Exonuclease I [Escherichia coli O55:H7 str. CB9615]
gi|320646788|gb|EFX15665.1| exonuclease I [Escherichia coli O157:H- str. 493-89]
gi|320652067|gb|EFX20410.1| exonuclease I [Escherichia coli O157:H- str. H 2687]
gi|320657429|gb|EFX25227.1| exonuclease I [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663245|gb|EFX30550.1| exonuclease I [Escherichia coli O55:H7 str. USDA 5905]
gi|320668145|gb|EFX35014.1| exonuclease I [Escherichia coli O157:H7 str. LSU-61]
gi|326338368|gb|EGD62196.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. 1044]
gi|326347111|gb|EGD70844.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. 1125]
gi|377984496|gb|EHV47727.1| exodeoxyribonuclease I [Escherichia coli DEC5E]
gi|386796620|gb|AFJ29654.1| exonuclease I [Escherichia coli Xuzhou21]
gi|408128240|gb|EKH58622.1| exonuclease [Escherichia coli PA4]
gi|408550684|gb|EKK28005.1| exodeoxyribonuclease I [Escherichia coli 5.2239]
gi|408551504|gb|EKK28777.1| exodeoxyribonuclease I [Escherichia coli 3.4870]
gi|408552094|gb|EKK29325.1| exonuclease [Escherichia coli 6.0172]
gi|408572180|gb|EKK48103.1| exodeoxyribonuclease I [Escherichia coli 8.0586]
gi|408581907|gb|EKK57196.1| exodeoxyribonuclease I [Escherichia coli 8.2524]
gi|408592432|gb|EKK66822.1| exodeoxyribonuclease I [Escherichia coli 10.0869]
gi|408597343|gb|EKK71402.1| exodeoxyribonuclease I [Escherichia coli 88.0221]
gi|408613196|gb|EKK86517.1| exodeoxyribonuclease I [Escherichia coli 10.0821]
gi|427205752|gb|EKV75988.1| exodeoxyribonuclease I [Escherichia coli 88.1042]
gi|427208402|gb|EKV78532.1| exodeoxyribonuclease I [Escherichia coli 89.0511]
gi|427224906|gb|EKV93579.1| exodeoxyribonuclease I [Escherichia coli 90.2281]
gi|427243058|gb|EKW10450.1| exodeoxyribonuclease I [Escherichia coli 93.0056]
gi|427243498|gb|EKW10872.1| exodeoxyribonuclease I [Escherichia coli 93.0055]
gi|427246842|gb|EKW14009.1| exodeoxyribonuclease I [Escherichia coli 94.0618]
gi|427262644|gb|EKW28507.1| exodeoxyribonuclease I [Escherichia coli 95.0943]
gi|427265576|gb|EKW31124.1| exodeoxyribonuclease I [Escherichia coli 95.1288]
gi|427277457|gb|EKW41991.1| exodeoxyribonuclease I [Escherichia coli 96.0428]
gi|427300355|gb|EKW63304.1| exodeoxyribonuclease I [Escherichia coli 96.0107]
gi|427303697|gb|EKW66405.1| exodeoxyribonuclease I [Escherichia coli 97.0003]
gi|427314464|gb|EKW76513.1| exodeoxyribonuclease I [Escherichia coli 97.1742]
gi|427320350|gb|EKW82118.1| exodeoxyribonuclease I [Escherichia coli 97.0007]
gi|427320648|gb|EKW82395.1| exodeoxyribonuclease I [Escherichia coli 99.0672]
gi|429254501|gb|EKY38913.1| exodeoxyribonuclease I [Escherichia coli 96.0109]
gi|429256247|gb|EKY40454.1| exodeoxyribonuclease I [Escherichia coli 97.0010]
gi|444574199|gb|ELV50520.1| exodeoxyribonuclease I [Escherichia coli 99.1753]
gi|444578630|gb|ELV54679.1| exodeoxyribonuclease I [Escherichia coli 99.1775]
gi|444594347|gb|ELV69531.1| exodeoxyribonuclease I [Escherichia coli PA11]
gi|444620023|gb|ELV94040.1| exodeoxyribonuclease I [Escherichia coli PA2]
gi|444635066|gb|ELW08506.1| exodeoxyribonuclease I [Escherichia coli PA8]
gi|444642756|gb|ELW15930.1| exodeoxyribonuclease I [Escherichia coli 99.1781]
gi|444650959|gb|ELW23770.1| exodeoxyribonuclease I [Escherichia coli 99.1762]
gi|444665705|gb|ELW37809.1| exodeoxyribonuclease I [Escherichia coli 95.0083]
gi|444673323|gb|ELW44967.1| exodeoxyribonuclease I [Escherichia coli 99.0670]
Length = 475
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|417265581|ref|ZP_12052951.1| exodeoxyribonuclease I [Escherichia coli 3.3884]
gi|386232255|gb|EII59601.1| exodeoxyribonuclease I [Escherichia coli 3.3884]
Length = 475
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAIAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|170019660|ref|YP_001724614.1| exonuclease I [Escherichia coli ATCC 8739]
gi|194436340|ref|ZP_03068442.1| exodeoxyribonuclease I [Escherichia coli 101-1]
gi|432627626|ref|ZP_19863604.1| exodeoxyribonuclease I [Escherichia coli KTE77]
gi|432835004|ref|ZP_20068543.1| exodeoxyribonuclease I [Escherichia coli KTE136]
gi|169754588|gb|ACA77287.1| Exodeoxyribonuclease I [Escherichia coli ATCC 8739]
gi|194425068|gb|EDX41053.1| exodeoxyribonuclease I [Escherichia coli 101-1]
gi|431163455|gb|ELE63876.1| exodeoxyribonuclease I [Escherichia coli KTE77]
gi|431385364|gb|ELG69351.1| exodeoxyribonuclease I [Escherichia coli KTE136]
Length = 475
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|110805983|ref|YP_689503.1| exonuclease I [Shigella flexneri 5 str. 8401]
gi|110615531|gb|ABF04198.1| Exodeoxyribonuclease I [Shigella flexneri 5 str. 8401]
Length = 474
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLAHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L DI+ +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMADLAGDISPLLELDIDTLRELLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+++ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHIDKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRHQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|419889846|ref|ZP_14410187.1| exonuclease I, partial [Escherichia coli O111:H8 str. CVM9570]
gi|388356516|gb|EIL21241.1| exonuclease I, partial [Escherichia coli O111:H8 str. CVM9570]
Length = 459
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 99 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 158
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 159 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 218
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 219 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 278
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 279 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 334
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 335 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 391
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 392 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 446
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 447 LLKALWQYAEEI 458
>gi|145639026|ref|ZP_01794634.1| exodeoxyribonuclease I [Haemophilus influenzae PittII]
gi|145271998|gb|EDK11907.1| exodeoxyribonuclease I [Haemophilus influenzae PittII]
gi|309750985|gb|ADO80969.1| Exodeoxyribonuclease I [Haemophilus influenzae R2866]
Length = 473
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGSMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLTKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|398847793|ref|ZP_10604677.1| exonuclease I [Pseudomonas sp. GM84]
gi|398251208|gb|EJN36482.1| exonuclease I [Pseudomonas sp. GM84]
Length = 478
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 198/371 (53%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI+V++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDVVRTAYALRPEGINWP-QQDGRTSLRLELLSQANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR PRL+ ++ LR K VL +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPRLYEWLFQLRSKHKVLEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R+ L + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRERLYTRHEELSEGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++ +NR P V++ L VL R DL A + ++ N W+ K+
Sbjct: 287 PVPLKLVQINRCP-VLAPLSVLRPADQQRLGIDL--ALLQTR-GEALANQQAQWQDKLEP 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + +++LY+ F+ +D +R++ P L ++ F++ ++ EL+F Y
Sbjct: 343 IYGKDEFAPNEDPEQQLYDGFLGDRDRRLCEQVRTLDPAALGGGHWMFDDPRMPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNA 356
RARNF ETL+ E +RW + R + N + F +S A+E ++L+A
Sbjct: 403 RARNFPETLNSDERQRWYAFCQQRLSDPLWGAPNTLGDFEQARQSAWANADEAGRRVLDA 462
Query: 357 LLMYGKSITQK 367
++ + ++++
Sbjct: 463 WQVHARQLSEQ 473
>gi|293415305|ref|ZP_06657948.1| exodeoxyribonuclease I [Escherichia coli B185]
gi|291432953|gb|EFF05932.1| exodeoxyribonuclease I [Escherichia coli B185]
Length = 475
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|262040031|ref|ZP_06013293.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042608|gb|EEW43617.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 474
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|260868731|ref|YP_003235133.1| exonuclease I [Escherichia coli O111:H- str. 11128]
gi|415823133|ref|ZP_11511652.1| exodeoxyribonuclease I [Escherichia coli OK1180]
gi|417192210|ref|ZP_12014310.1| exodeoxyribonuclease I [Escherichia coli 4.0522]
gi|417592274|ref|ZP_12242971.1| exodeoxyribonuclease I [Escherichia coli 2534-86]
gi|419896480|ref|ZP_14416165.1| exonuclease I [Escherichia coli O111:H8 str. CVM9574]
gi|257765087|dbj|BAI36582.1| exonuclease I [Escherichia coli O111:H- str. 11128]
gi|323177088|gb|EFZ62678.1| exodeoxyribonuclease I [Escherichia coli OK1180]
gi|345338611|gb|EGW71038.1| exodeoxyribonuclease I [Escherichia coli 2534-86]
gi|386191092|gb|EIH79838.1| exodeoxyribonuclease I [Escherichia coli 4.0522]
gi|388357633|gb|EIL22175.1| exonuclease I [Escherichia coli O111:H8 str. CVM9574]
Length = 474
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|433198589|ref|ZP_20382501.1| exodeoxyribonuclease I [Escherichia coli KTE94]
gi|431723255|gb|ELJ87217.1| exodeoxyribonuclease I [Escherichia coli KTE94]
Length = 475
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF++I + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYIFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|330000618|ref|ZP_08303759.1| exodeoxyribonuclease I [Klebsiella sp. MS 92-3]
gi|328537942|gb|EGF64123.1| exodeoxyribonuclease I [Klebsiella sp. MS 92-3]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 195/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDQP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAQDIV 474
>gi|300956271|ref|ZP_07168577.1| exonuclease [Escherichia coli MS 175-1]
gi|300316894|gb|EFJ66678.1| exonuclease [Escherichia coli MS 175-1]
Length = 491
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|422790726|ref|ZP_16843430.1| exonuclease [Escherichia coli TA007]
gi|323972839|gb|EGB68038.1| exonuclease [Escherichia coli TA007]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|417146152|ref|ZP_11987110.1| exodeoxyribonuclease I [Escherichia coli 1.2264]
gi|417629223|ref|ZP_12279461.1| exodeoxyribonuclease I [Escherichia coli STEC_MHI813]
gi|345373191|gb|EGX05152.1| exodeoxyribonuclease I [Escherichia coli STEC_MHI813]
gi|386163604|gb|EIH25399.1| exodeoxyribonuclease I [Escherichia coli 1.2264]
Length = 475
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|168751661|ref|ZP_02776683.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4113]
gi|168757555|ref|ZP_02782562.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4401]
gi|168769762|ref|ZP_02794769.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4486]
gi|168775542|ref|ZP_02800549.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4196]
gi|168782293|ref|ZP_02807300.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4076]
gi|168788678|ref|ZP_02813685.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC869]
gi|168799108|ref|ZP_02824115.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC508]
gi|195939352|ref|ZP_03084734.1| exonuclease I [Escherichia coli O157:H7 str. EC4024]
gi|208807658|ref|ZP_03249995.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4206]
gi|208817101|ref|ZP_03258193.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4045]
gi|208818353|ref|ZP_03258673.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4042]
gi|209398513|ref|YP_002271254.1| exonuclease I [Escherichia coli O157:H7 str. EC4115]
gi|254793793|ref|YP_003078630.1| exonuclease I [Escherichia coli O157:H7 str. TW14359]
gi|261225144|ref|ZP_05939425.1| exonuclease I [Escherichia coli O157:H7 str. FRIK2000]
gi|261257512|ref|ZP_05950045.1| exonuclease I [Escherichia coli O157:H7 str. FRIK966]
gi|416318645|ref|ZP_11661289.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC1212]
gi|419069979|ref|ZP_13615609.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3E]
gi|419081169|ref|ZP_13626621.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4A]
gi|419086828|ref|ZP_13632193.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4B]
gi|419098703|ref|ZP_13643908.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4D]
gi|419104418|ref|ZP_13649553.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4E]
gi|420270079|ref|ZP_14772443.1| exonuclease I [Escherichia coli PA22]
gi|420275916|ref|ZP_14778210.1| exonuclease I [Escherichia coli PA40]
gi|420287322|ref|ZP_14789514.1| exonuclease I [Escherichia coli TW10246]
gi|420292897|ref|ZP_14795024.1| exonuclease I [Escherichia coli TW11039]
gi|420298777|ref|ZP_14800828.1| exonuclease I [Escherichia coli TW09109]
gi|420304679|ref|ZP_14806679.1| exonuclease I [Escherichia coli TW10119]
gi|420310168|ref|ZP_14812104.1| exonuclease I [Escherichia coli EC1738]
gi|421812752|ref|ZP_16248487.1| exonuclease I [Escherichia coli 8.0416]
gi|421824481|ref|ZP_16259863.1| exonuclease I [Escherichia coli FRIK920]
gi|424084386|ref|ZP_17820913.1| exonuclease I [Escherichia coli FDA517]
gi|424090851|ref|ZP_17826818.1| exonuclease I [Escherichia coli FRIK1996]
gi|424097407|ref|ZP_17832775.1| exonuclease I [Escherichia coli FRIK1985]
gi|424103660|ref|ZP_17838493.1| exonuclease I [Escherichia coli FRIK1990]
gi|424116116|ref|ZP_17850002.1| exonuclease I [Escherichia coli PA3]
gi|424134801|ref|ZP_17867310.1| exonuclease I [Escherichia coli PA10]
gi|424244579|ref|ZP_17890224.1| exonuclease I [Escherichia coli PA25]
gi|424323894|ref|ZP_17896139.1| exonuclease I [Escherichia coli PA28]
gi|424462697|ref|ZP_17913212.1| exonuclease I [Escherichia coli PA39]
gi|424469103|ref|ZP_17918965.1| exonuclease I [Escherichia coli PA41]
gi|424494072|ref|ZP_17941889.1| exonuclease I [Escherichia coli TW09195]
gi|424500868|ref|ZP_17947821.1| exonuclease I [Escherichia coli EC4203]
gi|424507053|ref|ZP_17953511.1| exonuclease I [Escherichia coli EC4196]
gi|424520774|ref|ZP_17964933.1| exonuclease I [Escherichia coli TW14301]
gi|424544830|ref|ZP_17987305.1| exonuclease I [Escherichia coli EC4402]
gi|424551101|ref|ZP_17993003.1| exonuclease I [Escherichia coli EC4439]
gi|424569745|ref|ZP_18010352.1| exonuclease I [Escherichia coli EC4448]
gi|424575916|ref|ZP_18016039.1| exonuclease I [Escherichia coli EC1845]
gi|424581773|ref|ZP_18021454.1| exonuclease I [Escherichia coli EC1863]
gi|425138637|ref|ZP_18539072.1| exonuclease I [Escherichia coli 10.0833]
gi|425180737|ref|ZP_18578461.1| exonuclease I [Escherichia coli FRIK1999]
gi|425193826|ref|ZP_18590626.1| exonuclease I [Escherichia coli NE1487]
gi|425200208|ref|ZP_18596473.1| exonuclease I [Escherichia coli NE037]
gi|425206674|ref|ZP_18602503.1| exonuclease I [Escherichia coli FRIK2001]
gi|425243521|ref|ZP_18636860.1| exonuclease I [Escherichia coli MA6]
gi|425255420|ref|ZP_18647975.1| exonuclease I [Escherichia coli CB7326]
gi|425261719|ref|ZP_18653764.1| exonuclease I [Escherichia coli EC96038]
gi|425295200|ref|ZP_18685442.1| exonuclease I [Escherichia coli PA38]
gi|425330143|ref|ZP_18718053.1| exonuclease I [Escherichia coli EC1846]
gi|425336284|ref|ZP_18723721.1| exonuclease I [Escherichia coli EC1847]
gi|425342719|ref|ZP_18729653.1| exonuclease I [Escherichia coli EC1848]
gi|425348518|ref|ZP_18735036.1| exonuclease I [Escherichia coli EC1849]
gi|425354814|ref|ZP_18740919.1| exonuclease I [Escherichia coli EC1850]
gi|425360790|ref|ZP_18746474.1| exonuclease I [Escherichia coli EC1856]
gi|425366923|ref|ZP_18752157.1| exonuclease I [Escherichia coli EC1862]
gi|425373336|ref|ZP_18758021.1| exonuclease I [Escherichia coli EC1864]
gi|425386154|ref|ZP_18769753.1| exonuclease I [Escherichia coli EC1866]
gi|425392874|ref|ZP_18776026.1| exonuclease I [Escherichia coli EC1868]
gi|425398997|ref|ZP_18781740.1| exonuclease I [Escherichia coli EC1869]
gi|425405048|ref|ZP_18787326.1| exonuclease I [Escherichia coli EC1870]
gi|428947519|ref|ZP_19019839.1| exodeoxyribonuclease I [Escherichia coli 88.1467]
gi|428966139|ref|ZP_19036943.1| exodeoxyribonuclease I [Escherichia coli 90.0091]
gi|428971945|ref|ZP_19042315.1| exodeoxyribonuclease I [Escherichia coli 90.0039]
gi|429002418|ref|ZP_19070591.1| exodeoxyribonuclease I [Escherichia coli 95.0183]
gi|429033100|ref|ZP_19098661.1| exodeoxyribonuclease I [Escherichia coli 96.0939]
gi|429039258|ref|ZP_19104402.1| exodeoxyribonuclease I [Escherichia coli 96.0932]
gi|429073657|ref|ZP_19136931.1| exonuclease I [Escherichia coli 99.0678]
gi|444925446|ref|ZP_21244779.1| exodeoxyribonuclease I [Escherichia coli 09BKT078844]
gi|444931175|ref|ZP_21250243.1| exodeoxyribonuclease I [Escherichia coli 99.0814]
gi|444936501|ref|ZP_21255313.1| exodeoxyribonuclease I [Escherichia coli 99.0815]
gi|444942193|ref|ZP_21260740.1| exodeoxyribonuclease I [Escherichia coli 99.0816]
gi|444947764|ref|ZP_21266098.1| exodeoxyribonuclease I [Escherichia coli 99.0839]
gi|444953278|ref|ZP_21271401.1| exodeoxyribonuclease I [Escherichia coli 99.0848]
gi|444969864|ref|ZP_21287255.1| exodeoxyribonuclease I [Escherichia coli 99.1793]
gi|444975180|ref|ZP_21292340.1| exodeoxyribonuclease I [Escherichia coli 99.1805]
gi|444980626|ref|ZP_21297556.1| exodeoxyribonuclease I [Escherichia coli ATCC 700728]
gi|444991272|ref|ZP_21307937.1| exodeoxyribonuclease I [Escherichia coli PA19]
gi|444996520|ref|ZP_21313039.1| exodeoxyribonuclease I [Escherichia coli PA13]
gi|445007621|ref|ZP_21323885.1| exodeoxyribonuclease I [Escherichia coli PA47]
gi|445012753|ref|ZP_21328874.1| exodeoxyribonuclease I [Escherichia coli PA48]
gi|445024117|ref|ZP_21339959.1| exodeoxyribonuclease I [Escherichia coli 7.1982]
gi|445040436|ref|ZP_21355832.1| exodeoxyribonuclease I [Escherichia coli PA35]
gi|445045658|ref|ZP_21360933.1| exodeoxyribonuclease I [Escherichia coli 3.4880]
gi|452967094|ref|ZP_21965321.1| exonuclease I [Escherichia coli O157:H7 str. EC4009]
gi|187768997|gb|EDU32841.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4196]
gi|188014326|gb|EDU52448.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4113]
gi|189000162|gb|EDU69148.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4076]
gi|189355495|gb|EDU73914.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4401]
gi|189361232|gb|EDU79651.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4486]
gi|189371612|gb|EDU90028.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC869]
gi|189378492|gb|EDU96908.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC508]
gi|208727459|gb|EDZ77060.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4206]
gi|208730720|gb|EDZ79410.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4045]
gi|208738476|gb|EDZ86158.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4042]
gi|209159913|gb|ACI37346.1| exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC4115]
gi|254593193|gb|ACT72554.1| exonuclease I [Escherichia coli O157:H7 str. TW14359]
gi|320191824|gb|EFW66472.1| Exodeoxyribonuclease I [Escherichia coli O157:H7 str. EC1212]
gi|377913341|gb|EHU77483.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC3E]
gi|377927064|gb|EHU90988.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4A]
gi|377931561|gb|EHU95422.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4B]
gi|377943250|gb|EHV06971.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4D]
gi|377948579|gb|EHV12229.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC4E]
gi|390643331|gb|EIN22693.1| exonuclease I [Escherichia coli FRIK1996]
gi|390643921|gb|EIN23232.1| exonuclease I [Escherichia coli FDA517]
gi|390663449|gb|EIN40950.1| exonuclease I [Escherichia coli FRIK1985]
gi|390664633|gb|EIN41994.1| exonuclease I [Escherichia coli FRIK1990]
gi|390679135|gb|EIN55061.1| exonuclease I [Escherichia coli PA3]
gi|390699053|gb|EIN73414.1| exonuclease I [Escherichia coli PA10]
gi|390714735|gb|EIN87620.1| exonuclease I [Escherichia coli PA22]
gi|390724084|gb|EIN96656.1| exonuclease I [Escherichia coli PA25]
gi|390728283|gb|EIO00606.1| exonuclease I [Escherichia coli PA28]
gi|390758589|gb|EIO28024.1| exonuclease I [Escherichia coli PA40]
gi|390768625|gb|EIO37651.1| exonuclease I [Escherichia coli PA41]
gi|390770470|gb|EIO39324.1| exonuclease I [Escherichia coli PA39]
gi|390790532|gb|EIO57953.1| exonuclease I [Escherichia coli TW10246]
gi|390797548|gb|EIO64788.1| exonuclease I [Escherichia coli TW11039]
gi|390807348|gb|EIO74236.1| exonuclease I [Escherichia coli TW09109]
gi|390816269|gb|EIO82765.1| exonuclease I [Escherichia coli TW10119]
gi|390827595|gb|EIO93350.1| exonuclease I [Escherichia coli EC4203]
gi|390831247|gb|EIO96663.1| exonuclease I [Escherichia coli TW09195]
gi|390832766|gb|EIO97977.1| exonuclease I [Escherichia coli EC4196]
gi|390847162|gb|EIP10712.1| exonuclease I [Escherichia coli TW14301]
gi|390872206|gb|EIP33553.1| exonuclease I [Escherichia coli EC4402]
gi|390879316|gb|EIP40089.1| exonuclease I [Escherichia coli EC4439]
gi|390897141|gb|EIP56482.1| exonuclease I [Escherichia coli EC4448]
gi|390900307|gb|EIP59527.1| exonuclease I [Escherichia coli EC1738]
gi|390920121|gb|EIP78438.1| exonuclease I [Escherichia coli EC1863]
gi|390920974|gb|EIP79198.1| exonuclease I [Escherichia coli EC1845]
gi|408069363|gb|EKH03749.1| exonuclease I [Escherichia coli FRIK920]
gi|408098083|gb|EKH30909.1| exonuclease I [Escherichia coli FRIK1999]
gi|408108890|gb|EKH40827.1| exonuclease I [Escherichia coli NE1487]
gi|408116139|gb|EKH47477.1| exonuclease I [Escherichia coli NE037]
gi|408121975|gb|EKH52860.1| exonuclease I [Escherichia coli FRIK2001]
gi|408160996|gb|EKH88985.1| exonuclease I [Escherichia coli MA6]
gi|408175247|gb|EKI02187.1| exonuclease I [Escherichia coli CB7326]
gi|408181615|gb|EKI08163.1| exonuclease I [Escherichia coli EC96038]
gi|408218834|gb|EKI43020.1| exonuclease I [Escherichia coli PA38]
gi|408247888|gb|EKI70015.1| exonuclease I [Escherichia coli EC1846]
gi|408257857|gb|EKI79153.1| exonuclease I [Escherichia coli EC1847]
gi|408260499|gb|EKI81605.1| exonuclease I [Escherichia coli EC1848]
gi|408266391|gb|EKI87010.1| exonuclease I [Escherichia coli EC1849]
gi|408276010|gb|EKI95945.1| exonuclease I [Escherichia coli EC1850]
gi|408278044|gb|EKI97815.1| exonuclease I [Escherichia coli EC1856]
gi|408288863|gb|EKJ07659.1| exonuclease I [Escherichia coli EC1862]
gi|408292168|gb|EKJ10736.1| exonuclease I [Escherichia coli EC1864]
gi|408309209|gb|EKJ26407.1| exonuclease I [Escherichia coli EC1868]
gi|408309404|gb|EKJ26587.1| exonuclease I [Escherichia coli EC1866]
gi|408320646|gb|EKJ36734.1| exonuclease I [Escherichia coli EC1869]
gi|408327184|gb|EKJ42939.1| exonuclease I [Escherichia coli EC1870]
gi|408581351|gb|EKK56696.1| exonuclease I [Escherichia coli 10.0833]
gi|408601990|gb|EKK75754.1| exonuclease I [Escherichia coli 8.0416]
gi|427209240|gb|EKV79283.1| exodeoxyribonuclease I [Escherichia coli 88.1467]
gi|427223751|gb|EKV92478.1| exodeoxyribonuclease I [Escherichia coli 90.0091]
gi|427228427|gb|EKV96873.1| exodeoxyribonuclease I [Escherichia coli 90.0039]
gi|427262520|gb|EKW28401.1| exodeoxyribonuclease I [Escherichia coli 95.0183]
gi|427283957|gb|EKW48100.1| exodeoxyribonuclease I [Escherichia coli 96.0939]
gi|427292826|gb|EKW56147.1| exodeoxyribonuclease I [Escherichia coli 96.0932]
gi|427329167|gb|EKW90499.1| exonuclease I [Escherichia coli 99.0678]
gi|444539115|gb|ELV18912.1| exodeoxyribonuclease I [Escherichia coli 99.0814]
gi|444540826|gb|ELV20453.1| exodeoxyribonuclease I [Escherichia coli 09BKT078844]
gi|444548242|gb|ELV26718.1| exodeoxyribonuclease I [Escherichia coli 99.0815]
gi|444558459|gb|ELV35743.1| exodeoxyribonuclease I [Escherichia coli 99.0839]
gi|444559574|gb|ELV36787.1| exodeoxyribonuclease I [Escherichia coli 99.0816]
gi|444564757|gb|ELV41679.1| exodeoxyribonuclease I [Escherichia coli 99.0848]
gi|444580554|gb|ELV56468.1| exodeoxyribonuclease I [Escherichia coli 99.1793]
gi|444594616|gb|ELV69778.1| exodeoxyribonuclease I [Escherichia coli ATCC 700728]
gi|444597172|gb|ELV72197.1| exodeoxyribonuclease I [Escherichia coli 99.1805]
gi|444608206|gb|ELV82750.1| exodeoxyribonuclease I [Escherichia coli PA13]
gi|444608469|gb|ELV82999.1| exodeoxyribonuclease I [Escherichia coli PA19]
gi|444625263|gb|ELV99131.1| exodeoxyribonuclease I [Escherichia coli PA48]
gi|444625313|gb|ELV99175.1| exodeoxyribonuclease I [Escherichia coli PA47]
gi|444640031|gb|ELW13325.1| exodeoxyribonuclease I [Escherichia coli 7.1982]
gi|444655408|gb|ELW28025.1| exodeoxyribonuclease I [Escherichia coli PA35]
gi|444661189|gb|ELW33519.1| exodeoxyribonuclease I [Escherichia coli 3.4880]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|322832303|ref|YP_004212330.1| Exodeoxyribonuclease I [Rahnella sp. Y9602]
gi|321167504|gb|ADW73203.1| Exodeoxyribonuclease I [Rahnella sp. Y9602]
Length = 475
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 200/374 (53%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 ILYRNFHDPYAYSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGFPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+F+L R K + I P P +++
Sbjct: 173 IEHENAHDAMADVYATIAMAKLVKQAQPRLFSFLLEHRSKHKLNTLIDIPAMAPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP NKN +I +L D L + +++R+ L ++ + +
Sbjct: 233 MFGAARGNTAWVAPLAWHPENKNAVIMCDLAGDMSTLLDLNPDEMRERLYSRREALQAGQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 293 SPLPVKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLENLQL---LRQNPQVREKVVT 348
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD ++D LY+ F S D + I+ P+ L ++ F + ++E L
Sbjct: 349 MFAEAEPFTPSD---DVDARLYDGFFSDADRAAMRIIVETRPENLPALDLTFNDSRIEPL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDT 351
+F +RARN+ TL+ E KRW +R + +++ + + LE+ESL L + +
Sbjct: 406 LFRFRARNYPATLTDAEQKRWMLHRQEKLTDER-----VQAYILELESLYNLHEGDVEKM 460
Query: 352 KILNALLMYGKSIT 365
+L AL YGK +
Sbjct: 461 ALLKALFEYGKKLV 474
>gi|404375363|ref|ZP_10980547.1| exodeoxyribonuclease I [Escherichia sp. 1_1_43]
gi|404290845|gb|EJZ47743.1| exodeoxyribonuclease I [Escherichia sp. 1_1_43]
Length = 475
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 PVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|424932665|ref|ZP_18351037.1| Exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407806852|gb|EKF78103.1| Exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|419148917|ref|ZP_13693572.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC6B]
gi|419203926|ref|ZP_13747114.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8B]
gi|419216060|ref|ZP_13759062.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8D]
gi|419221934|ref|ZP_13764859.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8E]
gi|419392112|ref|ZP_13932924.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15A]
gi|419397151|ref|ZP_13937919.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15B]
gi|419402495|ref|ZP_13943219.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15C]
gi|419407614|ref|ZP_13948303.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15D]
gi|420089509|ref|ZP_14601302.1| exonuclease I [Escherichia coli O111:H8 str. CVM9602]
gi|420095902|ref|ZP_14607370.1| exonuclease I [Escherichia coli O111:H8 str. CVM9634]
gi|377992869|gb|EHV56010.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC6B]
gi|378049304|gb|EHW11647.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8B]
gi|378062544|gb|EHW24721.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8D]
gi|378065960|gb|EHW28099.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8E]
gi|378237312|gb|EHX97335.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15A]
gi|378243272|gb|EHY03218.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15B]
gi|378247029|gb|EHY06948.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15C]
gi|378253993|gb|EHY13857.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15D]
gi|394387575|gb|EJE64991.1| exonuclease I [Escherichia coli O111:H8 str. CVM9602]
gi|394391345|gb|EJE68223.1| exonuclease I [Escherichia coli O111:H8 str. CVM9634]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|425082298|ref|ZP_18485395.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|428935569|ref|ZP_19009036.1| exonuclease I [Klebsiella pneumoniae JHCK1]
gi|405600550|gb|EKB73715.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|426300239|gb|EKV62533.1| exonuclease I [Klebsiella pneumoniae JHCK1]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 196/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 YAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL + +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDEADQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQHADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|419278463|ref|ZP_13820712.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10E]
gi|419345676|ref|ZP_13887051.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13A]
gi|419350082|ref|ZP_13891423.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13B]
gi|419355498|ref|ZP_13896756.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13C]
gi|419360590|ref|ZP_13901809.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13D]
gi|419365690|ref|ZP_13906852.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13E]
gi|419375911|ref|ZP_13916937.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14B]
gi|419381242|ref|ZP_13922196.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14C]
gi|419386498|ref|ZP_13927377.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14D]
gi|378128679|gb|EHW90060.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10E]
gi|378186789|gb|EHX47410.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13A]
gi|378200828|gb|EHX61281.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13C]
gi|378201232|gb|EHX61680.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13B]
gi|378203731|gb|EHX64151.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13D]
gi|378212925|gb|EHX73244.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC13E]
gi|378220294|gb|EHX80556.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14B]
gi|378228313|gb|EHX88472.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14C]
gi|378231717|gb|EHX91825.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC14D]
Length = 474
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|416774927|ref|ZP_11874140.1| exonuclease I [Escherichia coli O157:H7 str. G5101]
gi|320641419|gb|EFX10863.1| exonuclease I [Escherichia coli O157:H7 str. G5101]
Length = 475
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|417085167|ref|ZP_11952657.1| exonuclease I [Escherichia coli cloneA_i1]
gi|419946883|ref|ZP_14463259.1| exonuclease I [Escherichia coli HM605]
gi|432598001|ref|ZP_19834277.1| exodeoxyribonuclease I [Escherichia coli KTE62]
gi|433005472|ref|ZP_20193901.1| exodeoxyribonuclease I [Escherichia coli KTE227]
gi|433154134|ref|ZP_20339077.1| exodeoxyribonuclease I [Escherichia coli KTE176]
gi|355351395|gb|EHG00585.1| exonuclease I [Escherichia coli cloneA_i1]
gi|388411920|gb|EIL72044.1| exonuclease I [Escherichia coli HM605]
gi|431130868|gb|ELE32951.1| exodeoxyribonuclease I [Escherichia coli KTE62]
gi|431514459|gb|ELH92300.1| exodeoxyribonuclease I [Escherichia coli KTE227]
gi|431674024|gb|ELJ40207.1| exodeoxyribonuclease I [Escherichia coli KTE176]
Length = 475
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y K I
Sbjct: 463 LLKALWQYAKEIV 475
>gi|422749250|ref|ZP_16803162.1| exonuclease [Escherichia coli H252]
gi|323951765|gb|EGB47639.1| exonuclease [Escherichia coli H252]
Length = 474
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y K I
Sbjct: 462 LLKALWQYAKEIV 474
>gi|193071491|ref|ZP_03052403.1| exodeoxyribonuclease I [Escherichia coli E110019]
gi|192955213|gb|EDV85704.1| exodeoxyribonuclease I [Escherichia coli E110019]
Length = 475
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|419255361|ref|ZP_13797880.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10A]
gi|419267644|ref|ZP_13809999.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10C]
gi|420121838|ref|ZP_14630892.1| exonuclease I [Escherichia coli O26:H11 str. CVM10030]
gi|420128040|ref|ZP_14636603.1| exonuclease I [Escherichia coli O26:H11 str. CVM10224]
gi|420136103|ref|ZP_14644169.1| exonuclease I [Escherichia coli O26:H11 str. CVM9952]
gi|424752656|ref|ZP_18180649.1| exonuclease I [Escherichia coli O26:H11 str. CFSAN001629]
gi|425379991|ref|ZP_18764041.1| exonuclease [Escherichia coli EC1865]
gi|378100347|gb|EHW62043.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10A]
gi|378111472|gb|EHW73056.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10C]
gi|394386535|gb|EJE64033.1| exonuclease I [Escherichia coli O26:H11 str. CVM10224]
gi|394418956|gb|EJE92594.1| exonuclease I [Escherichia coli O26:H11 str. CVM9952]
gi|394424715|gb|EJE97799.1| exonuclease I [Escherichia coli O26:H11 str. CVM10030]
gi|408297042|gb|EKJ15207.1| exonuclease [Escherichia coli EC1865]
gi|421937563|gb|EKT95173.1| exonuclease I [Escherichia coli O26:H11 str. CFSAN001629]
Length = 474
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDTA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|386705286|ref|YP_006169133.1| Exodeoxyribonuclease I [Escherichia coli P12b]
gi|417206415|ref|ZP_12019390.1| exodeoxyribonuclease I [Escherichia coli JB1-95]
gi|419142940|ref|ZP_13687681.1| exodeoxyribonuclease I [Escherichia coli DEC6A]
gi|419154381|ref|ZP_13698944.1| exodeoxyribonuclease I [Escherichia coli DEC6C]
gi|419197474|ref|ZP_13740863.1| exodeoxyribonuclease I [Escherichia coli DEC8A]
gi|432685815|ref|ZP_19921117.1| exodeoxyribonuclease I [Escherichia coli KTE156]
gi|377994719|gb|EHV57844.1| exodeoxyribonuclease I [Escherichia coli DEC6A]
gi|377996963|gb|EHV60070.1| exodeoxyribonuclease I [Escherichia coli DEC6C]
gi|378047296|gb|EHW09664.1| exodeoxyribonuclease I [Escherichia coli DEC8A]
gi|383103454|gb|AFG40963.1| Exodeoxyribonuclease I [Escherichia coli P12b]
gi|386197580|gb|EIH91780.1| exodeoxyribonuclease I [Escherichia coli JB1-95]
gi|431222850|gb|ELF20126.1| exodeoxyribonuclease I [Escherichia coli KTE156]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|424772459|ref|ZP_18199553.1| exonuclease I, partial [Escherichia coli O111:H8 str. CFSAN001632]
gi|421938010|gb|EKT95597.1| exonuclease I, partial [Escherichia coli O111:H8 str. CFSAN001632]
Length = 463
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 103 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 162
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 163 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 222
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 223 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 282
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 283 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 338
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 339 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 395
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 396 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 450
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 451 LLKALWQYAEEIV 463
>gi|419210164|ref|ZP_13753246.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8C]
gi|419877142|ref|ZP_14398778.1| exonuclease I [Escherichia coli O111:H11 str. CVM9534]
gi|419882016|ref|ZP_14403292.1| exonuclease I [Escherichia coli O111:H11 str. CVM9545]
gi|420105348|ref|ZP_14615873.1| exonuclease I [Escherichia coli O111:H11 str. CVM9455]
gi|420111128|ref|ZP_14620994.1| exonuclease I [Escherichia coli O111:H11 str. CVM9553]
gi|424761744|ref|ZP_18189288.1| exonuclease I [Escherichia coli O111:H11 str. CFSAN001630]
gi|378054218|gb|EHW16499.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC8C]
gi|388341020|gb|EIL07165.1| exonuclease I [Escherichia coli O111:H11 str. CVM9534]
gi|388363230|gb|EIL27168.1| exonuclease I [Escherichia coli O111:H11 str. CVM9545]
gi|394398599|gb|EJE74761.1| exonuclease I [Escherichia coli O111:H11 str. CVM9455]
gi|394399342|gb|EJE75389.1| exonuclease I [Escherichia coli O111:H11 str. CVM9553]
gi|421942352|gb|EKT99695.1| exonuclease I [Escherichia coli O111:H11 str. CFSAN001630]
Length = 474
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDAARLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|425422852|ref|ZP_18804020.1| exonuclease [Escherichia coli 0.1288]
gi|408344169|gb|EKJ58557.1| exonuclease [Escherichia coli 0.1288]
Length = 474
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
IP+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AIPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|209695175|ref|YP_002263104.1| exonuclease I [Aliivibrio salmonicida LFI1238]
gi|208009127|emb|CAQ79365.1| exodeoxyribonuclease I [Aliivibrio salmonicida LFI1238]
Length = 474
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 194/368 (52%), Gaps = 12/368 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY W+N SRWDL++V++A Y L P GI WP GKPSF+LE LS N +
Sbjct: 114 LYRNFFEPYGWSWQNGNSRWDLLDVMRAVYALRPEGIEWPKDEEGKPSFRLEKLSQANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ LA++++ P++FN++LS+R KK I P +++ M
Sbjct: 174 EHENAHDAMADVIATIELAKVVKKAQPKMFNYLLSMRHKKKAATLIDIIEMTPLMHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F IS + P+ HP N N +IT +L DP FL D ++ + K++ D
Sbjct: 234 FGVDRGNISWIVPVAWHPTNNNAVITIDLALDPAVFLELDAEQLHQRMYTKRSELGPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ PI ++ K L++ D +N+K I N I +K+
Sbjct: 294 PVPVKLVHLNKCPI-LAPAKTLTAENAIALNVDREACLRNLKV---IRENPEIRQKLIDL 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y I + N+D LY+ F S D + ++R +P++L + + +++ L+F Y
Sbjct: 350 YNIEPGYEKSSNVDTLLYDGFFSHADKTAIDMIRQSTPEQLIDFEPNVSDPRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+ E RW+ + + ++ + Y L +ES + NE T IL A+
Sbjct: 410 RARNFPHTLNESEQLRWQAH-LQDYFETHMSDYETRFESLYLES---EGNEKKTAILRAV 465
Query: 358 LMYGKSIT 365
Y + +
Sbjct: 466 YNYVQQLV 473
>gi|331642634|ref|ZP_08343769.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H736]
gi|331039432|gb|EGI11652.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H736]
Length = 491
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F ++ + + EI+ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQIFTSEF-----LQGYAEEIQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|309787899|ref|ZP_07682509.1| exodeoxyribonuclease I [Shigella dysenteriae 1617]
gi|308924298|gb|EFP69795.1| exodeoxyribonuclease I [Shigella dysenteriae 1617]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYTLRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF ETL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPETLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|117624215|ref|YP_853128.1| exonuclease I [Escherichia coli APEC O1]
gi|115513339|gb|ABJ01414.1| exonuclease I [Escherichia coli APEC O1]
Length = 491
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y K I
Sbjct: 479 LLKALWQYAKEIV 491
>gi|415829738|ref|ZP_11515811.1| exodeoxyribonuclease I [Escherichia coli OK1357]
gi|417597215|ref|ZP_12247861.1| exodeoxyribonuclease I [Escherichia coli 3030-1]
gi|417688893|ref|ZP_12338130.1| exodeoxyribonuclease I [Shigella boydii 5216-82]
gi|419930709|ref|ZP_14448305.1| exonuclease I [Escherichia coli 541-1]
gi|323183799|gb|EFZ69190.1| exodeoxyribonuclease I [Escherichia coli OK1357]
gi|332092391|gb|EGI97464.1| exodeoxyribonuclease I [Shigella boydii 5216-82]
gi|345354783|gb|EGW87000.1| exodeoxyribonuclease I [Escherichia coli 3030-1]
gi|388399727|gb|EIL60510.1| exonuclease I [Escherichia coli 541-1]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AIPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|260855993|ref|YP_003229884.1| exonuclease I [Escherichia coli O26:H11 str. 11368]
gi|415793274|ref|ZP_11495994.1| exodeoxyribonuclease I [Escherichia coli EPECa14]
gi|417298473|ref|ZP_12085712.1| exodeoxyribonuclease I [Escherichia coli 900105 (10e)]
gi|257754642|dbj|BAI26144.1| exonuclease I [Escherichia coli O26:H11 str. 11368]
gi|323152400|gb|EFZ38688.1| exodeoxyribonuclease I [Escherichia coli EPECa14]
gi|386258153|gb|EIJ13635.1| exodeoxyribonuclease I [Escherichia coli 900105 (10e)]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDTA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|449061165|ref|ZP_21738607.1| exonuclease I [Klebsiella pneumoniae hvKP1]
gi|448873293|gb|EMB08393.1| exonuclease I [Klebsiella pneumoniae hvKP1]
Length = 474
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 195/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYSLRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVFTPE-----FLQAYADELQMLYQQYADDKEKLAQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAQDIV 474
>gi|269102608|ref|ZP_06155305.1| exodeoxyribonuclease I [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162506|gb|EEZ41002.1| exodeoxyribonuclease I [Photobacterium damselae subsp. damselae CIP
102761]
Length = 473
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 177/320 (55%), Gaps = 8/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+ SRWDL+++++ Y L P GI WP + G PSFKLE LS N +
Sbjct: 114 LYRNFYDPYGWSWQQGNSRWDLLDIMRTCYALRPDGINWPTDDEGLPSFKLEKLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+L++ N P+LF+++ + R K + I P ++T M
Sbjct: 174 EHSNAHDAMADVYATIEMAKLVKQNQPKLFDYLFNNRHKNKLQQLIDVVNLTPLVHVTGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + PI HP NKN +IT NL DP + D IR L K+ D
Sbjct: 234 FGTVCGNTSWIVPIAWHPDNKNAVITINLAQDPTPLIELDSETIRTRLYTKRADLAADEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ PI ++ K L++N R D KN+ + I + I +K+
Sbjct: 294 PIPLKEVHLNKCPI-LAPAKTLTANDADRLDIDREQCLKNL---ALIKQHPEIREKVLEV 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + D N+D LY+ F S D + + I+R +P++L+N+ +K+++ L+F Y
Sbjct: 350 FSVKREFDNHDNVDAMLYDGFFSHADRVAMDIIRETAPEELANLQLEVADKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF TLSY+E RWK +
Sbjct: 410 RARNFPMTLSYEEQTRWKHH 429
>gi|157161503|ref|YP_001458821.1| exonuclease I [Escherichia coli HS]
gi|419938664|ref|ZP_14455488.1| exonuclease I [Escherichia coli 75]
gi|432637258|ref|ZP_19873133.1| exodeoxyribonuclease I [Escherichia coli KTE81]
gi|432737531|ref|ZP_19972292.1| exodeoxyribonuclease I [Escherichia coli KTE42]
gi|157067183|gb|ABV06438.1| exodeoxyribonuclease I [Escherichia coli HS]
gi|388409774|gb|EIL70040.1| exonuclease I [Escherichia coli 75]
gi|431171793|gb|ELE71953.1| exodeoxyribonuclease I [Escherichia coli KTE81]
gi|431282894|gb|ELF73767.1| exodeoxyribonuclease I [Escherichia coli KTE42]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432793214|ref|ZP_20027299.1| exodeoxyribonuclease I [Escherichia coli KTE78]
gi|432799171|ref|ZP_20033194.1| exodeoxyribonuclease I [Escherichia coli KTE79]
gi|431339958|gb|ELG27012.1| exodeoxyribonuclease I [Escherichia coli KTE78]
gi|431344038|gb|ELG30994.1| exodeoxyribonuclease I [Escherichia coli KTE79]
Length = 475
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFAPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|300898614|ref|ZP_07116941.1| exonuclease [Escherichia coli MS 198-1]
gi|418957628|ref|ZP_13509551.1| exonuclease [Escherichia coli J53]
gi|300357710|gb|EFJ73580.1| exonuclease [Escherichia coli MS 198-1]
gi|384379237|gb|EIE37105.1| exonuclease [Escherichia coli J53]
Length = 499
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|429105225|ref|ZP_19167094.1| Exodeoxyribonuclease I [Cronobacter malonaticus 681]
gi|426291948|emb|CCJ93207.1| Exodeoxyribonuclease I [Cronobacter malonaticus 681]
Length = 491
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 194/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 130 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 189
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 190 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 249
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + PI HP N+N +I +L D L + + +R+ L K + E
Sbjct: 250 MFGAWRGNTSWIAPIAWHPENRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGEAS 309
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 310 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 368
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 369 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 425
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 426 RARNFPGTLSEQEQERWLTHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 480
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 481 ALYQYAQEI 489
>gi|417602593|ref|ZP_12253163.1| exodeoxyribonuclease I [Escherichia coli STEC_94C]
gi|345350259|gb|EGW82534.1| exodeoxyribonuclease I [Escherichia coli STEC_94C]
Length = 475
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432358354|ref|ZP_19601580.1| exodeoxyribonuclease I [Escherichia coli KTE4]
gi|432392524|ref|ZP_19635355.1| exodeoxyribonuclease I [Escherichia coli KTE21]
gi|430877009|gb|ELC00465.1| exodeoxyribonuclease I [Escherichia coli KTE4]
gi|430918286|gb|ELC39316.1| exodeoxyribonuclease I [Escherichia coli KTE21]
Length = 475
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFAPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|52425136|ref|YP_088273.1| exonuclease I [Mannheimia succiniciproducens MBEL55E]
gi|52307188|gb|AAU37688.1| SbcB protein [Mannheimia succiniciproducens MBEL55E]
Length = 472
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 182/322 (56%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP G PSF+LE L+ N +
Sbjct: 111 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWPLDEEGMPSFRLEKLTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 171 EHENAHDAMADVYATIAMAKLIKEKQPKLFQFFFENRGKKEIEKWIDTAEMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP+N+N +I +L + L ++R+ L +K + D
Sbjct: 231 LGNYRGNCTWIAPLAWHPINQNAVIACDLAQNIDDLLNKSAVELRENLYTQKTELENDGV 290
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ PI+ +L N R D N+K L+ ++F
Sbjct: 291 LPVPLKLVHINKCPIIAPAKTLLPENAQ-RLGIDRQFCLDNLKKLQKSLDIRDKVIEVFN 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ K ++SD N++ ELY+ F SK D + ILR++ P+KL++ FE+K++ +L+F
Sbjct: 350 EERKFDDSD---NVETELYSGFFSKADKNNMTILRTLEPEKLADSGLQFEDKRIPDLLFH 406
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 407 YRARHFYKTLNRGEQIKWQKYR 428
>gi|432802161|ref|ZP_20036142.1| exodeoxyribonuclease I [Escherichia coli KTE84]
gi|431349138|gb|ELG35980.1| exodeoxyribonuclease I [Escherichia coli KTE84]
Length = 475
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRVAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|12084680|pdb|1FXX|A Chain A, The Structure Of Exonuclease I Suggests How Processivity
Is Achieved
gi|166007143|pdb|2QXF|A Chain A, Product Bound Structure Of Exonuclease I At 1.5 Angstrom
Resolution
gi|193885301|pdb|3C94|A Chain A, ExoiSSB-Ct Complex
gi|193885304|pdb|3C95|A Chain A, Exonuclease I (Apo)
gi|284055587|pdb|3HL8|A Chain A, Crystal Structure Of Exonuclease I In Complex With
Inhibitor Bcbp
gi|284055600|pdb|3HP9|A Chain A, Crystal Structure Of SsbEXONUCLEASE I IN COMPLEX WITH
INHIBITOR CFAM
Length = 482
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 203/374 (54%), Gaps = 20/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSITQ 366
L AL Y I +
Sbjct: 463 LLKALWQYADEIVE 476
>gi|419181308|ref|ZP_13724923.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7C]
gi|419186757|ref|ZP_13730272.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7D]
gi|420386049|ref|ZP_14885403.1| exodeoxyribonuclease I [Escherichia coli EPECa12]
gi|378023874|gb|EHV86542.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7C]
gi|378029329|gb|EHV91942.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7D]
gi|391305534|gb|EIQ63315.1| exodeoxyribonuclease I [Escherichia coli EPECa12]
Length = 474
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNTVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|432531436|ref|ZP_19768464.1| exodeoxyribonuclease I [Escherichia coli KTE233]
gi|431054122|gb|ELD63704.1| exodeoxyribonuclease I [Escherichia coli KTE233]
Length = 475
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 203/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419323390|ref|ZP_13865088.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12B]
gi|378166003|gb|EHX26932.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12B]
Length = 474
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|423121161|ref|ZP_17108845.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5246]
gi|376395791|gb|EHT08437.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5246]
Length = 480
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 193/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N+
Sbjct: 120 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTVAND 179
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 180 IEHSNAHDAMADVYATIAMAKLVKARQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K E
Sbjct: 240 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDMTPLLELDADTLRERLYTPKADLGELA 299
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P++ + L R + N++ S IF +
Sbjct: 300 AVPIKLVHLNKCPVLAQD-NTLRPQDADRLGINRQRCLDNLQLLRSHPQVREKAVAIFAE 358
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+F Y
Sbjct: 359 AEPFVPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNY 415
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF +L E +RW ++R F Y + M Y + E +K + L
Sbjct: 416 RARNFPGSLDEAEQQRWLEHRREVFTPAFLQAYADELQMLYQQHEQDSEKLAQ-----LK 470
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 471 ALWQYAQEIV 480
>gi|301329562|ref|ZP_07222343.1| exonuclease [Escherichia coli MS 78-1]
gi|386281092|ref|ZP_10058755.1| exodeoxyribonuclease I [Escherichia sp. 4_1_40B]
gi|419370518|ref|ZP_13911638.1| exodeoxyribonuclease I [Escherichia coli DEC14A]
gi|432543620|ref|ZP_19780464.1| exodeoxyribonuclease I [Escherichia coli KTE236]
gi|432549111|ref|ZP_19785879.1| exodeoxyribonuclease I [Escherichia coli KTE237]
gi|432691989|ref|ZP_19927220.1| exodeoxyribonuclease I [Escherichia coli KTE161]
gi|432962138|ref|ZP_20151836.1| exodeoxyribonuclease I [Escherichia coli KTE202]
gi|433063474|ref|ZP_20250401.1| exodeoxyribonuclease I [Escherichia coli KTE125]
gi|300844319|gb|EFK72079.1| exonuclease [Escherichia coli MS 78-1]
gi|378217903|gb|EHX78178.1| exodeoxyribonuclease I [Escherichia coli DEC14A]
gi|386121802|gb|EIG70416.1| exodeoxyribonuclease I [Escherichia sp. 4_1_40B]
gi|431074477|gb|ELD82036.1| exodeoxyribonuclease I [Escherichia coli KTE236]
gi|431079389|gb|ELD86343.1| exodeoxyribonuclease I [Escherichia coli KTE237]
gi|431227464|gb|ELF24601.1| exodeoxyribonuclease I [Escherichia coli KTE161]
gi|431474369|gb|ELH54187.1| exodeoxyribonuclease I [Escherichia coli KTE202]
gi|431581946|gb|ELI54386.1| exodeoxyribonuclease I [Escherichia coli KTE125]
Length = 474
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAQEI 473
>gi|422009063|ref|ZP_16356046.1| exonuclease I [Providencia rettgeri Dmel1]
gi|414092881|gb|EKT54553.1| exonuclease I [Providencia rettgeri Dmel1]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP + PS +LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQQGNSRWDLLDTLRACFALRPEGIQWPENEDSLPSMRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+F++ LR K + I P +++
Sbjct: 174 VAHENAHDAMSDVLATINMAKLLKAAQPRMFDYFYQLRNKNKISQLIDIVEITPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + SY+SL+ P+ HP NKN +I +L D + D+ ++R L K
Sbjct: 234 MFGALRSYVSLVAPLAWHPDNKNAVIMCDLSADISPLIELDVQQLRTRLYTPKAELAGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC--ASSILNNTYIWKKIF 236
+P+ ++H+N+ PI+ K L R D + +N++ + N I ++F
Sbjct: 294 PVPVKLVHINKCPILAPE-KTLRPEDAQRTGVDRDLCMRNLETLRKHPEIRNKLI--ELF 350
Query: 237 LDYKI-NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ +I SD ++D ++YN F S D + I+R SP+ L + FE+K+++EL F
Sbjct: 351 SEPQIFAESD---DVDTQIYNGFFSPSDRSTMDIIRETSPQNLPALELSFEDKRMKELFF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--- 352
Y+ARN+ TLSY E +RW ++R R Y + L Y++ LL ++HD K
Sbjct: 408 RYKARNYPATLSYDEQQRWLQHR--RDYFNEERLTE----YMQQIQLLLVEHQHDEKRCQ 461
Query: 353 ILNALLMYGKSIT 365
L AL+ Y + +
Sbjct: 462 QLKALINYARDLA 474
>gi|417947067|ref|ZP_12590269.1| exonuclease I [Escherichia coli XH140A]
gi|417978629|ref|ZP_12619390.1| exonuclease I [Escherichia coli XH001]
gi|450244838|ref|ZP_21900506.1| exonuclease I [Escherichia coli S17]
gi|342361195|gb|EGU25340.1| exonuclease I [Escherichia coli XH140A]
gi|344191718|gb|EGV45827.1| exonuclease I [Escherichia coli XH001]
gi|449320875|gb|EMD10897.1| exonuclease I [Escherichia coli S17]
Length = 474
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|422371864|ref|ZP_16452235.1| exonuclease [Escherichia coli MS 16-3]
gi|433326579|ref|ZP_20403384.1| exonuclease I [Escherichia coli J96]
gi|315296392|gb|EFU55692.1| exonuclease [Escherichia coli MS 16-3]
gi|432345393|gb|ELL39899.1| exonuclease I [Escherichia coli J96]
Length = 474
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQIFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|315634266|ref|ZP_07889553.1| exodeoxyribonuclease I [Aggregatibacter segnis ATCC 33393]
gi|315476856|gb|EFU67601.1| exodeoxyribonuclease I [Aggregatibacter segnis ATCC 33393]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 196/369 (53%), Gaps = 22/369 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP ++G PSF LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPNGIEWPLDDDGMPSFHLEKLTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK + I P +++ M
Sbjct: 174 EHTNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEIEKLINTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L + L ++R+ L KK + E
Sbjct: 234 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLEAGV 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ +IH+N+ I+ +L N + +N A K +L + + +K+
Sbjct: 294 LPVPLKLIHINKCSILAPEKTLLPQNAE---RLGINRALCE-KNQQRLLASKDVRQKVMD 349
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
D + SD N++ ELYN F S D +AILR++ P+KL+ N F++ ++ +L
Sbjct: 350 IFQQDREFEASD---NVETELYNGFFSDADKNNMAILRTLEPEKLAEHNLSFQDPRIPQL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYR-------ISRFYNKKNNLYNINMFYLEIESLLKKA 346
+F YRAR+F TL+ E +W+KYR + RF L N E +LL+K
Sbjct: 407 LFHYRARHFYRTLNRAEQIKWQKYRRKKLEAEVLRFEQSLQELATQNENDEEKLTLLQKV 466
Query: 347 NEHDTKILN 355
E+ KI++
Sbjct: 467 YEYGNKIID 475
>gi|432417365|ref|ZP_19659972.1| exodeoxyribonuclease I [Escherichia coli KTE44]
gi|430939745|gb|ELC59955.1| exodeoxyribonuclease I [Escherichia coli KTE44]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKTNG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATISMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFAPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|16129952|ref|NP_416515.1| exonuclease I [Escherichia coli str. K-12 substr. MG1655]
gi|170081641|ref|YP_001730961.1| exonuclease I [Escherichia coli str. K-12 substr. DH10B]
gi|238901201|ref|YP_002926997.1| exonuclease I [Escherichia coli BW2952]
gi|386595199|ref|YP_006091599.1| Exodeoxyribonuclease I [Escherichia coli DH1]
gi|387621721|ref|YP_006129348.1| exonuclease I [Escherichia coli DH1]
gi|388478065|ref|YP_490253.1| exonuclease I [Escherichia coli str. K-12 substr. W3110]
gi|415774679|ref|ZP_11487026.1| exodeoxyribonuclease I [Escherichia coli 3431]
gi|423702247|ref|ZP_17676706.1| exodeoxyribonuclease I [Escherichia coli H730]
gi|432461033|ref|ZP_19703183.1| exodeoxyribonuclease I [Escherichia coli KTE204]
gi|432671088|ref|ZP_19906618.1| exodeoxyribonuclease I [Escherichia coli KTE119]
gi|433048366|ref|ZP_20235722.1| exodeoxyribonuclease I [Escherichia coli KTE120]
gi|433068304|ref|ZP_20255098.1| exodeoxyribonuclease I [Escherichia coli KTE128]
gi|442594523|ref|ZP_21012419.1| Exodeoxyribonuclease I [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|462029|sp|P04995.2|EX1_ECOLI RecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; AltName:
Full=DNA deoxyribophosphodiesterase; Short=dRPase
gi|405954|gb|AAA16417.1| exonuclease I [Escherichia coli]
gi|1736685|dbj|BAA15839.1| exonuclease I [Escherichia coli str. K12 substr. W3110]
gi|1788321|gb|AAC75072.1| exonuclease I [Escherichia coli str. K-12 substr. MG1655]
gi|89330228|emb|CAJ84171.1| exodeoxyribonuclease I [Escherichia coli str. K-12 substr. MG1655]
gi|169889476|gb|ACB03183.1| exonuclease I [Escherichia coli str. K-12 substr. DH10B]
gi|238861050|gb|ACR63048.1| exonuclease I [Escherichia coli BW2952]
gi|260448888|gb|ACX39310.1| Exodeoxyribonuclease I [Escherichia coli DH1]
gi|315136644|dbj|BAJ43803.1| exonuclease I [Escherichia coli DH1]
gi|315618014|gb|EFU98606.1| exodeoxyribonuclease I [Escherichia coli 3431]
gi|359332408|dbj|BAL38855.1| exonuclease I [Escherichia coli str. K-12 substr. MDS42]
gi|385710809|gb|EIG47785.1| exodeoxyribonuclease I [Escherichia coli H730]
gi|430989162|gb|ELD05623.1| exodeoxyribonuclease I [Escherichia coli KTE204]
gi|431210403|gb|ELF08458.1| exodeoxyribonuclease I [Escherichia coli KTE119]
gi|431565025|gb|ELI38169.1| exodeoxyribonuclease I [Escherichia coli KTE120]
gi|431584474|gb|ELI56453.1| exodeoxyribonuclease I [Escherichia coli KTE128]
gi|441605515|emb|CCP97699.1| Exodeoxyribonuclease I [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|218690073|ref|YP_002398285.1| exonuclease I [Escherichia coli ED1a]
gi|432370151|ref|ZP_19613239.1| exodeoxyribonuclease I [Escherichia coli KTE10]
gi|432622225|ref|ZP_19858256.1| exodeoxyribonuclease I [Escherichia coli KTE76]
gi|218427637|emb|CAR08548.2| exonuclease I [Escherichia coli ED1a]
gi|430885284|gb|ELC08210.1| exodeoxyribonuclease I [Escherichia coli KTE10]
gi|431159025|gb|ELE59582.1| exodeoxyribonuclease I [Escherichia coli KTE76]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419289957|ref|ZP_13832050.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC11A]
gi|419295284|ref|ZP_13837330.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC11B]
gi|419869148|ref|ZP_14391363.1| exonuclease I [Escherichia coli O103:H2 str. CVM9450]
gi|420391736|ref|ZP_14890989.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli EPEC C342-62]
gi|378130365|gb|EHW91730.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC11A]
gi|378142371|gb|EHX03573.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC11B]
gi|388343039|gb|EIL09038.1| exonuclease I [Escherichia coli O103:H2 str. CVM9450]
gi|391312417|gb|EIQ70025.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli EPEC C342-62]
Length = 474
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|153949389|ref|YP_001401389.1| exonuclease I [Yersinia pseudotuberculosis IP 31758]
gi|152960884|gb|ABS48345.1| exodeoxyribonuclease I [Yersinia pseudotuberculosis IP 31758]
Length = 476
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ P+ L ++ F++ +LE L+F
Sbjct: 350 LFAQAEPFAVADDVDTQLYNGFFSDADRATMKIIQQTEPQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|432947896|ref|ZP_20143052.1| exodeoxyribonuclease I [Escherichia coli KTE196]
gi|433043598|ref|ZP_20231094.1| exodeoxyribonuclease I [Escherichia coli KTE117]
gi|431457874|gb|ELH38211.1| exodeoxyribonuclease I [Escherichia coli KTE196]
gi|431555919|gb|ELI29754.1| exodeoxyribonuclease I [Escherichia coli KTE117]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 199/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|303252408|ref|ZP_07338574.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247643|ref|ZP_07529685.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|302648867|gb|EFL79057.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855855|gb|EFM88016.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 514
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 199/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGMPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D +AILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMAILRTLPPRELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|433130572|ref|ZP_20316012.1| exodeoxyribonuclease I [Escherichia coli KTE163]
gi|431646352|gb|ELJ13849.1| exodeoxyribonuclease I [Escherichia coli KTE163]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|416266661|ref|ZP_11641679.1| Exodeoxyribonuclease I [Shigella dysenteriae CDC 74-1112]
gi|420380750|ref|ZP_14880209.1| exodeoxyribonuclease I [Shigella dysenteriae 225-75]
gi|320175604|gb|EFW50697.1| Exodeoxyribonuclease I [Shigella dysenteriae CDC 74-1112]
gi|391301386|gb|EIQ59276.1| exodeoxyribonuclease I [Shigella dysenteriae 225-75]
Length = 475
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F++ + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|344344254|ref|ZP_08775118.1| Exodeoxyribonuclease I [Marichromatium purpuratum 984]
gi|343804211|gb|EGV22113.1| Exodeoxyribonuclease I [Marichromatium purpuratum 984]
Length = 477
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 193/370 (52%), Gaps = 12/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RNL +PY REW+N SRWDLI+ ++ + L P GI WP +G SF+LE LS N
Sbjct: 109 LLYRNLFDPYAREWRNGNSRWDLIDTLRLAHALRPEGIAWPRHEDGSTSFRLEALSAANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDAL+DVRAT+ LARL++ PRLF++ L+LR K+ A I +P + +
Sbjct: 169 IEHGQAHDALADVRATIALARLLKRAQPRLFDYALTLRDKRQARALID--RGQPLLHASA 226
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+ + I+ + + HP N N ++ ++L H P L ++++R L + D+
Sbjct: 227 RYPAALGCIAPIAALAPHPGNPNGVLCFDLRHHPALLLDTPVDELRARLFTPAAARGADV 286
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ +HLNR+P V++ LK L + R++ D ++ + A+ +
Sbjct: 287 QRPPLKTVHLNRAP-VLAPLKTLGAEAAARWQIDPAAVEQHARFAAEHAAELAKRARALF 345
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
D E + D LY F+ +D L LR + P +L + FE+ +L E++F
Sbjct: 346 D---TPPAAETDPDLMLYGGGFLGDRDRRLLDELRRLPPAQLVGLAPAFEDPRLPEMLFR 402
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLLKKA-NEHDTKIL 354
YRARN+ ETLS +E +RW YR++R I+ F + L + + ++L
Sbjct: 403 YRARNWPETLSPEERERWDGYRLARLTEPDGGASLTIDDFEQRLAELDAEGLDPARARVL 462
Query: 355 NALLMYGKSI 364
AL + + +
Sbjct: 463 EALADWAEQV 472
>gi|378979689|ref|YP_005227830.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|364519100|gb|AEW62228.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|238895590|ref|YP_002920325.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|386035623|ref|YP_005955536.1| exonuclease I [Klebsiella pneumoniae KCTC 2242]
gi|402779901|ref|YP_006635447.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|424831415|ref|ZP_18256143.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|238547907|dbj|BAH64258.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339762751|gb|AEJ98971.1| exonuclease I [Klebsiella pneumoniae KCTC 2242]
gi|402540831|gb|AFQ64980.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|414708849|emb|CCN30553.1| exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|417132167|ref|ZP_11976952.1| exodeoxyribonuclease I [Escherichia coli 5.0588]
gi|386150021|gb|EIH01310.1| exodeoxyribonuclease I [Escherichia coli 5.0588]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|354723919|ref|ZP_09038134.1| exonuclease I [Enterobacter mori LMG 25706]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 195/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ + I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLTTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L KN +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + N Y + M Y + E N +L
Sbjct: 410 RARNYPGTLDEVEQERWLQHRRNVFTPEFLNSYAQELEMLYGQYE-----GNAEKQALLK 464
Query: 356 ALLMYGKSIT 365
+L Y + I
Sbjct: 465 SLFQYAQEIV 474
>gi|432485825|ref|ZP_19727741.1| exodeoxyribonuclease I [Escherichia coli KTE212]
gi|433173934|ref|ZP_20358464.1| exodeoxyribonuclease I [Escherichia coli KTE232]
gi|431016222|gb|ELD29769.1| exodeoxyribonuclease I [Escherichia coli KTE212]
gi|431692692|gb|ELJ58117.1| exodeoxyribonuclease I [Escherichia coli KTE232]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLYTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNT 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|68250106|ref|YP_249218.1| exonuclease I [Haemophilus influenzae 86-028NP]
gi|148825915|ref|YP_001290668.1| exonuclease I [Haemophilus influenzae PittEE]
gi|68058305|gb|AAX88558.1| exodeoxyribonuclease I [Haemophilus influenzae 86-028NP]
gi|148716075|gb|ABQ98285.1| exodeoxyribonuclease I [Haemophilus influenzae PittEE]
Length = 473
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 178/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWQKYR 429
>gi|419334934|ref|ZP_13876469.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12D]
gi|378183021|gb|EHX43668.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12D]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|425288959|ref|ZP_18679815.1| exonuclease [Escherichia coli 3006]
gi|408214253|gb|EKI38702.1| exonuclease [Escherichia coli 3006]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|417259970|ref|ZP_12047490.1| exodeoxyribonuclease I [Escherichia coli 2.3916]
gi|417639731|ref|ZP_12289876.1| exodeoxyribonuclease I [Escherichia coli TX1999]
gi|418303361|ref|ZP_12915155.1| exodeoxyribonuclease I [Escherichia coli UMNF18]
gi|419170662|ref|ZP_13714550.1| exodeoxyribonuclease I [Escherichia coli DEC7A]
gi|419192045|ref|ZP_13735501.1| exodeoxyribonuclease I [Escherichia coli DEC7E]
gi|339415459|gb|AEJ57131.1| exodeoxyribonuclease I [Escherichia coli UMNF18]
gi|345393460|gb|EGX23234.1| exodeoxyribonuclease I [Escherichia coli TX1999]
gi|378015704|gb|EHV78596.1| exodeoxyribonuclease I [Escherichia coli DEC7A]
gi|378039104|gb|EHW01607.1| exodeoxyribonuclease I [Escherichia coli DEC7E]
gi|386226287|gb|EII48592.1| exodeoxyribonuclease I [Escherichia coli 2.3916]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNTVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|358410652|gb|AEU10041.1| exonuclease I [Photobacterium damselae subsp. piscicida]
Length = 473
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 176/320 (55%), Gaps = 8/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+ SRWDL+++++ Y L P GI WP + G PSFKLE LS N +
Sbjct: 114 LYRNFYDPYGWSWQQGNSRWDLLDIMRTCYALRPDGINWPTDDEGLPSFKLEKLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++D+ AT+ +A+L++ N P+LF+++ + R K + I P ++T M
Sbjct: 174 EHSNAHDAMADMYATIEMAKLVKQNQPKLFDYLFNNRHKNKLQQLIDVVNLTPLVHVTGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + PI HP NKN +IT NL DP + D IR L K+ D
Sbjct: 234 FGTVCGNTSWIVPIAWHPDNKNAVITINLAQDPTPLIELDSETIRTRLYTKRTDLAADEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ PI ++ K L++N R D KN+ + I + I +K+
Sbjct: 294 PIPLKEVHLNKCPI-LAPAKTLTANDADRLDIDREQCLKNL---ALIKQHPEIREKVLEV 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + D N+D LY+ F S D L I+R +P++L+N+ +K+++ L+F Y
Sbjct: 350 FSVKREFDNHDNVDAMLYDGFFSHADRAALDIIRETAPEELANLQLEVADKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RARNF TLSY+E RWK +
Sbjct: 410 RARNFPMTLSYEEQTRWKHH 429
>gi|444350603|ref|YP_007386747.1| Exodeoxyribonuclease I (EC 3.1.11.1) [Enterobacter aerogenes
EA1509E]
gi|443901433|emb|CCG29207.1| Exodeoxyribonuclease I (EC 3.1.11.1) [Enterobacter aerogenes
EA1509E]
Length = 480
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 120 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEDGLPSFRLEHLTVANG 179
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ + PRLF+++ S R K+ + I P +P +++
Sbjct: 180 IEHSNAHDAMADVYATIAMAKLVKTHQPRLFDYLYSHRNKRKLATLIDVPQLKPLVHVSG 239
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L ++ +
Sbjct: 240 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDMSPLLELDADTLRERLYTPRDELGDLP 299
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R ++ +N A + N + +K+
Sbjct: 300 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGINIQRCLEN---AQLLRANPQVREKVVAL 355
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 356 YAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 412
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-- 352
F YRARNF TL E +RW ++R + F + + + E++ + ++ + K
Sbjct: 413 FNYRARNFPGTLDENEQQRWLEHRRNVFTPEF-----LQAYADELQVMYQQYADDSEKQA 467
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 468 LLKALWQYAQEIV 480
>gi|419977269|ref|ZP_14492627.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419983018|ref|ZP_14498242.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419988792|ref|ZP_14503850.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419994593|ref|ZP_14509477.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|420000388|ref|ZP_14515112.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420006128|ref|ZP_14520705.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420011907|ref|ZP_14526319.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420017749|ref|ZP_14531997.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420023419|ref|ZP_14537533.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420029187|ref|ZP_14543113.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420034944|ref|ZP_14548692.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420040653|ref|ZP_14554228.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420046325|ref|ZP_14559746.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420052122|ref|ZP_14565369.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420057879|ref|ZP_14570979.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420063517|ref|ZP_14576427.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420069266|ref|ZP_14581998.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420075084|ref|ZP_14587644.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420080895|ref|ZP_14593284.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420086659|ref|ZP_14598784.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421912146|ref|ZP_16341888.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421913886|ref|ZP_16343549.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|428151223|ref|ZP_18998964.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941917|ref|ZP_19014941.1| exonuclease I [Klebsiella pneumoniae VA360]
gi|397338649|gb|EJJ31982.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397338786|gb|EJJ32093.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397338972|gb|EJJ32255.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397355886|gb|EJJ48801.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397355957|gb|EJJ48855.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397357406|gb|EJJ50165.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397372782|gb|EJJ65255.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397373756|gb|EJJ66146.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397377539|gb|EJJ69769.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397388713|gb|EJJ80678.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397390965|gb|EJJ82858.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397394901|gb|EJJ86618.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397406295|gb|EJJ97723.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397406309|gb|EJJ97734.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397413743|gb|EJK04950.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397422976|gb|EJK13922.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397423490|gb|EJK14415.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397429986|gb|EJK20688.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397438841|gb|EJK29315.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397444749|gb|EJK35015.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|410113965|emb|CCM84513.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410123811|emb|CCM86174.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426299622|gb|EKV61949.1| exonuclease I [Klebsiella pneumoniae VA360]
gi|427538819|emb|CCM95102.1| Exodeoxyribonuclease I [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|387607712|ref|YP_006096568.1| exodeoxyribonuclease I [Escherichia coli 042]
gi|284922012|emb|CBG35090.1| exodeoxyribonuclease I [Escherichia coli 042]
Length = 491
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATISMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVT 478
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 479 LLKALWQYAEEI 490
>gi|152971008|ref|YP_001336117.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150955857|gb|ABR77887.1| 3' --> 5' specific exonuclease I [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|442597483|ref|ZP_21015274.1| Exodeoxyribonuclease I [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441653963|emb|CCQ01164.1| Exodeoxyribonuclease I [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + ++ E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQVYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|365137516|ref|ZP_09344233.1| exodeoxyribonuclease I [Klebsiella sp. 4_1_44FAA]
gi|363656074|gb|EHL94848.1| exodeoxyribonuclease I [Klebsiella sp. 4_1_44FAA]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|218705553|ref|YP_002413072.1| exonuclease I [Escherichia coli UMN026]
gi|293405493|ref|ZP_06649485.1| sbcB [Escherichia coli FVEC1412]
gi|298381181|ref|ZP_06990780.1| exodeoxyribonuclease I [Escherichia coli FVEC1302]
gi|417587016|ref|ZP_12237787.1| exodeoxyribonuclease I [Escherichia coli STEC_C165-02]
gi|419932647|ref|ZP_14449942.1| exonuclease I [Escherichia coli 576-1]
gi|422334072|ref|ZP_16415080.1| exodeoxyribonuclease I [Escherichia coli 4_1_47FAA]
gi|432353962|ref|ZP_19597236.1| exodeoxyribonuclease I [Escherichia coli KTE2]
gi|432402314|ref|ZP_19645067.1| exodeoxyribonuclease I [Escherichia coli KTE26]
gi|432426537|ref|ZP_19669039.1| exodeoxyribonuclease I [Escherichia coli KTE181]
gi|432538214|ref|ZP_19775117.1| exodeoxyribonuclease I [Escherichia coli KTE235]
gi|432641482|ref|ZP_19877317.1| exodeoxyribonuclease I [Escherichia coli KTE83]
gi|432666418|ref|ZP_19902000.1| exodeoxyribonuclease I [Escherichia coli KTE116]
gi|432775105|ref|ZP_20009387.1| exodeoxyribonuclease I [Escherichia coli KTE54]
gi|432886945|ref|ZP_20101034.1| exodeoxyribonuclease I [Escherichia coli KTE158]
gi|432913046|ref|ZP_20118856.1| exodeoxyribonuclease I [Escherichia coli KTE190]
gi|433019042|ref|ZP_20207270.1| exodeoxyribonuclease I [Escherichia coli KTE105]
gi|433053630|ref|ZP_20240812.1| exodeoxyribonuclease I [Escherichia coli KTE122]
gi|433178837|ref|ZP_20363238.1| exodeoxyribonuclease I [Escherichia coli KTE82]
gi|218432650|emb|CAR13545.1| exonuclease I [Escherichia coli UMN026]
gi|291427701|gb|EFF00728.1| sbcB [Escherichia coli FVEC1412]
gi|298278623|gb|EFI20137.1| exodeoxyribonuclease I [Escherichia coli FVEC1302]
gi|345336644|gb|EGW69078.1| exodeoxyribonuclease I [Escherichia coli STEC_C165-02]
gi|373244894|gb|EHP64371.1| exodeoxyribonuclease I [Escherichia coli 4_1_47FAA]
gi|388416314|gb|EIL76206.1| exonuclease I [Escherichia coli 576-1]
gi|430876203|gb|ELB99724.1| exodeoxyribonuclease I [Escherichia coli KTE2]
gi|430927144|gb|ELC47731.1| exodeoxyribonuclease I [Escherichia coli KTE26]
gi|430955990|gb|ELC74672.1| exodeoxyribonuclease I [Escherichia coli KTE181]
gi|431070128|gb|ELD78448.1| exodeoxyribonuclease I [Escherichia coli KTE235]
gi|431182098|gb|ELE81925.1| exodeoxyribonuclease I [Escherichia coli KTE83]
gi|431201793|gb|ELF00490.1| exodeoxyribonuclease I [Escherichia coli KTE116]
gi|431318820|gb|ELG06515.1| exodeoxyribonuclease I [Escherichia coli KTE54]
gi|431416990|gb|ELG99461.1| exodeoxyribonuclease I [Escherichia coli KTE158]
gi|431440475|gb|ELH21804.1| exodeoxyribonuclease I [Escherichia coli KTE190]
gi|431531420|gb|ELI08084.1| exodeoxyribonuclease I [Escherichia coli KTE105]
gi|431570566|gb|ELI43477.1| exodeoxyribonuclease I [Escherichia coli KTE122]
gi|431701679|gb|ELJ66593.1| exodeoxyribonuclease I [Escherichia coli KTE82]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATISMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVT 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|157267360|ref|NP_288516.2| exonuclease I [Escherichia coli O157:H7 str. EDL933]
gi|169822936|gb|AAG57070.2|AE005426_12 exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase
[Escherichia coli O157:H7 str. EDL933]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ ++
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYAXDKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + J
Sbjct: 463 LLKALWQYAEXJV 475
>gi|422766587|ref|ZP_16820314.1| exonuclease [Escherichia coli E1520]
gi|323936909|gb|EGB33192.1| exonuclease [Escherichia coli E1520]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFAHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|388543224|ref|ZP_10146515.1| exonuclease I [Pseudomonas sp. M47T1]
gi|388278536|gb|EIK98107.1| exonuclease I [Pseudomonas sp. M47T1]
Length = 476
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 189/341 (55%), Gaps = 11/341 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ +RWDLI+V++ Y L P GI WP + +G+ S KLE L+ N +
Sbjct: 110 LYRNFFDPYAREWQGGNTRWDLIDVVRTAYALRPDGIAWP-QVDGRVSMKLELLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L+N++ LR K+ VL ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIRERQPKLYNWLYQLRSKQKVLDQVR--LFQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ +Y+ ++ P+ HP N+N LI +L DP+ L + +R+ L ++
Sbjct: 227 FSAERNYLGVVLPVGWHPRNRNALIVCDLHFDPQVLLDEPVEVLRERLYTRRQELAAGQL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFL 237
+P+ ++H+NR P V++ L VL R + D+ + A + W+ K+
Sbjct: 287 PVPLKLVHVNRCP-VLAPLSVLRDEDRQRLQLDMTLYQQR---ADQLQQAHGQWRDKLPA 342
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + +++LY+ FI +D +R++ P +L + F++++L EL+F Y
Sbjct: 343 LYGEEAFAAVDDPEQQLYDGFIGDRDRRLCEQVRTLDPHQLGLETWMFDDERLPELLFRY 402
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLE 338
RARNF +TL+ +E RW ++ R + N + E
Sbjct: 403 RARNFPDTLNEEESSRWLEFCRQRLTDPAAGAPNTLAGFAE 443
>gi|193062859|ref|ZP_03043952.1| exodeoxyribonuclease I [Escherichia coli E22]
gi|194428755|ref|ZP_03061291.1| exodeoxyribonuclease I [Escherichia coli B171]
gi|260844621|ref|YP_003222399.1| exonuclease I [Escherichia coli O103:H2 str. 12009]
gi|415797800|ref|ZP_11498205.1| exodeoxyribonuclease I [Escherichia coli E128010]
gi|417176569|ref|ZP_12006365.1| exodeoxyribonuclease I [Escherichia coli 3.2608]
gi|417182725|ref|ZP_12009282.1| exodeoxyribonuclease I [Escherichia coli 93.0624]
gi|417238027|ref|ZP_12035758.1| exodeoxyribonuclease I [Escherichia coli 9.0111]
gi|417249092|ref|ZP_12040877.1| exodeoxyribonuclease I [Escherichia coli 4.0967]
gi|417623908|ref|ZP_12274207.1| exodeoxyribonuclease I [Escherichia coli STEC_H.1.8]
gi|419300704|ref|ZP_13842703.1| exodeoxyribonuclease I [Escherichia coli DEC11C]
gi|419317131|ref|ZP_13858941.1| exodeoxyribonuclease I [Escherichia coli DEC12A]
gi|419329354|ref|ZP_13870960.1| exodeoxyribonuclease I [Escherichia coli DEC12C]
gi|192931502|gb|EDV84103.1| exodeoxyribonuclease I [Escherichia coli E22]
gi|194413202|gb|EDX29488.1| exodeoxyribonuclease I [Escherichia coli B171]
gi|257759768|dbj|BAI31265.1| exonuclease I [Escherichia coli O103:H2 str. 12009]
gi|323161928|gb|EFZ47802.1| exodeoxyribonuclease I [Escherichia coli E128010]
gi|345376869|gb|EGX08801.1| exodeoxyribonuclease I [Escherichia coli STEC_H.1.8]
gi|378150320|gb|EHX11435.1| exodeoxyribonuclease I [Escherichia coli DEC11C]
gi|378170394|gb|EHX31277.1| exodeoxyribonuclease I [Escherichia coli DEC12A]
gi|378170713|gb|EHX31591.1| exodeoxyribonuclease I [Escherichia coli DEC12C]
gi|386179261|gb|EIH56740.1| exodeoxyribonuclease I [Escherichia coli 3.2608]
gi|386184578|gb|EIH67317.1| exodeoxyribonuclease I [Escherichia coli 93.0624]
gi|386213805|gb|EII24230.1| exodeoxyribonuclease I [Escherichia coli 9.0111]
gi|386221075|gb|EII37538.1| exodeoxyribonuclease I [Escherichia coli 4.0967]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|251785384|ref|YP_002999688.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli BL21(DE3)]
gi|253773058|ref|YP_003035889.1| exonuclease I [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162000|ref|YP_003045108.1| exonuclease I [Escherichia coli B str. REL606]
gi|254288788|ref|YP_003054536.1| exonuclease I [Escherichia coli BL21(DE3)]
gi|300930717|ref|ZP_07146095.1| exonuclease [Escherichia coli MS 187-1]
gi|432815753|ref|ZP_20049537.1| exodeoxyribonuclease I [Escherichia coli KTE115]
gi|242377657|emb|CAQ32417.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli BL21(DE3)]
gi|253324102|gb|ACT28704.1| Exodeoxyribonuclease I [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973901|gb|ACT39572.1| exonuclease I [Escherichia coli B str. REL606]
gi|253978095|gb|ACT43765.1| exonuclease I [Escherichia coli BL21(DE3)]
gi|300461438|gb|EFK24931.1| exonuclease [Escherichia coli MS 187-1]
gi|431363977|gb|ELG50521.1| exodeoxyribonuclease I [Escherichia coli KTE115]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAQEIV 475
>gi|218554573|ref|YP_002387486.1| exonuclease I [Escherichia coli IAI1]
gi|218361341|emb|CAQ98929.1| exonuclease I [Escherichia coli IAI1]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432955454|ref|ZP_20147394.1| exodeoxyribonuclease I [Escherichia coli KTE197]
gi|431468125|gb|ELH48131.1| exodeoxyribonuclease I [Escherichia coli KTE197]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F ++ + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQIFTSEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419863692|ref|ZP_14386198.1| exonuclease I [Escherichia coli O103:H25 str. CVM9340]
gi|422761227|ref|ZP_16814986.1| exonuclease [Escherichia coli E1167]
gi|324119041|gb|EGC12930.1| exonuclease [Escherichia coli E1167]
gi|388341587|gb|EIL07682.1| exonuclease I [Escherichia coli O103:H25 str. CVM9340]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|425305600|ref|ZP_18695321.1| exonuclease [Escherichia coli N1]
gi|408228991|gb|EKI52483.1| exonuclease [Escherichia coli N1]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|417291312|ref|ZP_12078593.1| exodeoxyribonuclease I [Escherichia coli B41]
gi|386253634|gb|EIJ03324.1| exodeoxyribonuclease I [Escherichia coli B41]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419175591|ref|ZP_13719431.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7B]
gi|378033557|gb|EHV96133.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC7B]
Length = 474
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|51595906|ref|YP_070097.1| exonuclease I [Yersinia pseudotuberculosis IP 32953]
gi|170024741|ref|YP_001721246.1| exonuclease I [Yersinia pseudotuberculosis YPIII]
gi|186894995|ref|YP_001872107.1| exonuclease I [Yersinia pseudotuberculosis PB1/+]
gi|51589188|emb|CAH20808.1| exodeoxyribonuclease I [Yersinia pseudotuberculosis IP 32953]
gi|169751275|gb|ACA68793.1| Exodeoxyribonuclease I [Yersinia pseudotuberculosis YPIII]
gi|186698021|gb|ACC88650.1| Exonuclease domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 476
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ P+ L ++ F++ +LE L+F
Sbjct: 350 LFAQAEPFAVTDDVDTQLYNGFFSDADRATMKIIQQTEPQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLNNSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|407692328|ref|YP_006817117.1| exonuclease I [Actinobacillus suis H91-0380]
gi|407388385|gb|AFU18878.1| exonuclease I [Actinobacillus suis H91-0380]
Length = 514
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 201/378 (53%), Gaps = 29/378 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVTDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGDMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
F + + + PI HP N+N ++ +L D L + ++R L KK E +
Sbjct: 232 FGNARGNTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
P+S+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVSLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + S N++ LY+ F S D +AILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEERRFESS--ANVETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKY-------RISRFYNKKNNLYNINMFYLEIESLLKKANE 348
YRAR++ ETLS E +W+KY + ++F +NL+ I+ N
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQFAEAIDNLFQIH-----------HDNP 455
Query: 349 HDTKILNALLMYGKSITQ 366
K+L L Y I +
Sbjct: 456 EKVKLLENLTAYAAQIAE 473
>gi|187733588|ref|YP_001879865.1| exonuclease I [Shigella boydii CDC 3083-94]
gi|386614625|ref|YP_006134291.1| exodeoxyribonuclease [Escherichia coli UMNK88]
gi|187430580|gb|ACD09854.1| exodeoxyribonuclease I [Shigella boydii CDC 3083-94]
gi|332343794|gb|AEE57128.1| exodeoxyribonuclease [Escherichia coli UMNK88]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|309797270|ref|ZP_07691665.1| exonuclease [Escherichia coli MS 145-7]
gi|308119145|gb|EFO56407.1| exonuclease [Escherichia coli MS 145-7]
Length = 475
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AIPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|261494569|ref|ZP_05991051.1| exodeoxyribonuclease I [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309760|gb|EEY10981.1| exodeoxyribonuclease I [Mannheimia haemolytica serotype A2 str.
OVINE]
Length = 515
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 198/372 (53%), Gaps = 15/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI WP G PSFKLE+L+ N +
Sbjct: 112 FFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F +LR KK V I P +++ M
Sbjct: 172 AHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ H N+N +I +L D L + +R L K++ E+
Sbjct: 232 LGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLRQRLYTKRDELAENEL 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ PI+ +L N R D +N+K + + I +K+
Sbjct: 292 SVPLKLVHINKCPILAPAKTLLPENAE-RLGIDRALCLENLKTLKA--QKSLIREKVIEI 348
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N++ LY+ F S D +AILR++ P+ L+N FE+ ++E L+F Y
Sbjct: 349 FNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANHGLKFEDPRVEALLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RAR++ +TLS E +W+K+ + K F I+ L ++ N K+L
Sbjct: 409 RARHYPQTLSRAEQIKWQKHCNQQIEAK------AEQFAQSIDDLFQQHHDNPEKVKLLE 462
Query: 356 ALLMYGKSITQK 367
L Y + I+Q+
Sbjct: 463 NLTAYAEQISQQ 474
>gi|410631920|ref|ZP_11342591.1| exodeoxyribonuclease I [Glaciecola arctica BSs20135]
gi|410148456|dbj|GAC19458.1| exodeoxyribonuclease I [Glaciecola arctica BSs20135]
Length = 479
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 206/372 (55%), Gaps = 15/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWD+I++ +A Y L P GI WP G PSFKL+ L+ N++
Sbjct: 114 LYRNFYDPYAREWQHGNSRWDIIDLARACYALRPEGINWPLNEAGLPSFKLQDLTKANDI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA+SDV AT+ +A+LI+ P+LF+++ SLR K+ VL +I + P +I+
Sbjct: 174 QHQDAHDAMSDVYATIAVAKLIKERQPKLFDYLFSLRDKRKVLEQIDYQQLTPLVHISSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF----K 177
S H + + PI +HP NKN +I NL DP ++IR L + N+ +
Sbjct: 234 IPSVHGCCTWIVPIAMHPTNKNAVIVLNLALDPSPLFTLSADQIRQKL-YTPNAMLGENE 292
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ +PI +IH+N+ P V++ K LS+ R D +N++ + L + +++++
Sbjct: 293 QRLPIKLIHINKCP-VLAPAKTLSAENAERLGIDRQLCLQNLQKIKANLQSLEKLQQVYI 351
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + L+ + LY F S D + + + L+ ++ FE+++L L+F
Sbjct: 352 QTEQRDP---LDAEHALYSGGFFSSNDKELMKKVTHSDLQGLTELSLPFEDERLNTLLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESLLKK--ANEHDTK 352
YRARN ++LS E++RW++YR +FY+ ++ +I M + +++E L + N
Sbjct: 409 YRARNAPQSLSETEVERWQRYRHFKFYDNESPA-SIKMPEYLMQLEQLSSEYARNPEKLA 467
Query: 353 ILNALLMYGKSI 364
+L L Y K +
Sbjct: 468 VLKNLYNYAKGL 479
>gi|319897029|ref|YP_004135224.1| exonuclease I [Haemophilus influenzae F3031]
gi|317432533|emb|CBY80893.1| exonuclease I [Haemophilus influenzae F3031]
Length = 473
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 188/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y + G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDAGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ + +LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMGKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETADRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +WKKYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWKKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|410623341|ref|ZP_11334158.1| exodeoxyribonuclease I [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410157263|dbj|GAC29532.1| exodeoxyribonuclease I [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 506
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 193/370 (52%), Gaps = 11/370 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PYEREWKN SRWD+I++ +A Y L P GI WP NG PSFKLE LS N ++
Sbjct: 141 YRNFYDPYEREWKNGNSRWDIIDLARACYALRPEGIKWPLNENGFPSFKLEDLSAANGIA 200
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA+SDV+AT+ ARLI+ + P+LF+F SLR K V+ I +PF +I+ M
Sbjct: 201 HESAHDAVSDVKATIAFARLIKASQPKLFDFYFSLRNKNTVMQNIDIANQKPFLHISGML 260
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI-- 180
+ S PI IHP NKN +I +L D D +++ L K++ +
Sbjct: 261 PAAQGCCSWFMPITIHPTNKNAIICVDLSSDLSAIEHMDPIDLKEILYTKQDELPASVKK 320
Query: 181 -PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
I ++H+N+SP V + K L+ R +N + I+ T +F D
Sbjct: 321 PGIKLLHINKSPFV-APAKTLTPEHAKRLTISRETCLQNHEFVKGIVGITEKLAAVFDDK 379
Query: 240 KINNSDLELNIDEELYN-NFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
N E++ID LY F S D + ++ P++L+ + E + YR
Sbjct: 380 --NRQYDEVDIDASLYTRGFASSADKQWMTEVKMADPEQLAVWQDKAPDALYAEQLMRYR 437
Query: 299 ARNFIETLSYKELKRWKKYRISRFY--NKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
ARNF+ TL EL +W+ +R +RF NKK L +I ++IE L +K + D K +N
Sbjct: 438 ARNFLNTLDQSELDKWQAHRKARFTTDNKKTCL-SIAECQMQIEELAEKYAD-DVKKINL 495
Query: 357 LLMYGKSITQ 366
L + I Q
Sbjct: 496 LSTVTRYIEQ 505
>gi|386265826|ref|YP_005829318.1| Exodeoxyribonuclease I [Haemophilus influenzae R2846]
gi|309973062|gb|ADO96263.1| Exodeoxyribonuclease I [Haemophilus influenzae R2846]
Length = 473
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 181/323 (56%), Gaps = 11/323 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYV--LAEIGWPIARPFFYIT 119
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + L +IG P +++
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDIG--AMTPLVHVS 229
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE- 178
M + + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 230 GMLGNYRGNCTWVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEER 289
Query: 179 ---DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI 235
+P+ ++H+N+ PI ++ K L R D N+ + + I
Sbjct: 290 GVSSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F + + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F
Sbjct: 349 FNEERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 407 HYRARHFYKTLTRAEQIKWQKYR 429
>gi|429085795|ref|ZP_19148757.1| Exodeoxyribonuclease I [Cronobacter condimenti 1330]
gi|426544993|emb|CCJ74798.1| Exodeoxyribonuclease I [Cronobacter condimenti 1330]
Length = 475
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 196/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHTNAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDIVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K + E
Sbjct: 234 MFGAWRGNTSWIAPLAWHPDNRNAVIVVDLAGDISPLLELDADALRERLYTPKTALGEAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK-IFL 237
+P+ ++HLN+ P V++ L R D N+K + ++ + +K + L
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKV---LRDSPQVREKLVAL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAPPFPPTSNVDAQLYEGFFSDADRAAMRIVLQTPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEPEQQRWLNHRRDVFTPEFLQTYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALYQYAQEI 473
>gi|307261134|ref|ZP_07542811.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306869164|gb|EFN00964.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 514
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVTDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + N++ LY+ F S D +AILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--RFEPSANVETTLYDGFFSPADKNNMAILRTLPPRELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|300824755|ref|ZP_07104860.1| exonuclease [Escherichia coli MS 119-7]
gi|300522742|gb|EFK43811.1| exonuclease [Escherichia coli MS 119-7]
Length = 499
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|423706059|ref|ZP_17680442.1| exodeoxyribonuclease I [Escherichia coli B799]
gi|432806124|ref|ZP_20040062.1| exodeoxyribonuclease I [Escherichia coli KTE91]
gi|432934789|ref|ZP_20134226.1| exodeoxyribonuclease I [Escherichia coli KTE184]
gi|433194044|ref|ZP_20378038.1| exodeoxyribonuclease I [Escherichia coli KTE90]
gi|385712526|gb|EIG49477.1| exodeoxyribonuclease I [Escherichia coli B799]
gi|431355245|gb|ELG41959.1| exodeoxyribonuclease I [Escherichia coli KTE91]
gi|431452957|gb|ELH33367.1| exodeoxyribonuclease I [Escherichia coli KTE184]
gi|431716289|gb|ELJ80423.1| exodeoxyribonuclease I [Escherichia coli KTE90]
Length = 475
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +I+
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHISG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|417608586|ref|ZP_12259092.1| exodeoxyribonuclease I [Escherichia coli STEC_DG131-3]
gi|345359176|gb|EGW91355.1| exodeoxyribonuclease I [Escherichia coli STEC_DG131-3]
Length = 475
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAIIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|415812183|ref|ZP_11504409.1| exodeoxyribonuclease I [Escherichia coli LT-68]
gi|323172599|gb|EFZ58233.1| exodeoxyribonuclease I [Escherichia coli LT-68]
Length = 475
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 200/370 (54%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFMPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L+++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|389808058|ref|ZP_10204468.1| exonuclease I [Rhodanobacter thiooxydans LCS2]
gi|388442936|gb|EIL99095.1| exonuclease I [Rhodanobacter thiooxydans LCS2]
Length = 484
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 194/376 (51%), Gaps = 13/376 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
M +RN PY REW+N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N
Sbjct: 108 MLYRNFHEPYGREWENGNSRWDLIDLVRMCQALRPEGIVWPTREDGSPSFKLEHLASANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+ ++AHDALSDVRA + LARLIR PRL+++ +LR+K+ V + P +++
Sbjct: 168 LTQERAHDALSDVRALIELARLIRVRQPRLWDWYYALRRKQKVFELLDVVNMTPLVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++++ P+ HP +I ++L DP +L D ++I D + + ED
Sbjct: 228 RYPASRHCLAVIAPLAAHPSRPGEVIVYDLATDPAAWLALDEDEIADRIFTARADLPEDV 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ + NR+P ++ L VL + R + DL + ++ +++F
Sbjct: 288 ERIPLRTVRANRAP-ALAPLSVLQGVDLDRLQLDLARCQAHHDVLHAVDGLAEKLRRVFQ 346
Query: 238 DYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
++L D EL F+ D LA +R+ P++L +F F + + EL+
Sbjct: 347 ----RAAELPPPEDPELALYGGGFLPDADKRLLAQVRATPPRELGTRSFPFRDPRYPELL 402
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDT-K 352
F YRARN+ ETL +E RW+ +R +R + ++ ++ + L D
Sbjct: 403 FRYRARNWPETLDAEEYARWENFRRARLTTRTPLTGLTLDDYFARLAELRHAPQAQDKLP 462
Query: 353 ILNALLMYGKSITQKI 368
+L+ L +G+ + I
Sbjct: 463 LLDQLQAWGEQLAASI 478
>gi|331677916|ref|ZP_08378591.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H591]
gi|331074376|gb|EGI45696.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H591]
Length = 491
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +I+
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHISG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K + ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTNLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 478
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 479 LLKALWQYAEEI 490
>gi|441502061|ref|ZP_20984074.1| Exodeoxyribonuclease I [Photobacterium sp. AK15]
gi|441430500|gb|ELR67950.1| Exodeoxyribonuclease I [Photobacterium sp. AK15]
Length = 473
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 195/363 (53%), Gaps = 12/363 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++ Y L P GI WP + G PSFKLEHLS N +
Sbjct: 114 LYRNFYDPYAWSWQNGNSRWDMLDIMRTCYALRPDGINWPNNDEGLPSFKLEHLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++I+ N P+LFN++ +LR K+ + I P +++ M
Sbjct: 174 EHANAHDAMADVYATIELAKIIKKNQPKLFNYLFNLRNKRKLQELIDIVELTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +IT NL DP + D + +R+ L K+ D
Sbjct: 234 FGVECGNTSWIVPVGWHPTNKNAVITVNLAMDPTPLIELDADTLRERLYTKRVDLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ K L + R D K+++ S + I +K+
Sbjct: 294 PVPVKLVHLNKCP-VLAPAKTLKAEDAERIGIDREQCLKHLQILKS---HPEIREKLVAL 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D LY+ F S D + I+R + L ++ ++K+++ L+F Y
Sbjct: 350 YSAEREYEPNTNVDAMLYDGFFSNSDRSTIDIIRETQSEDLGKLDLKVDDKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL +K+ ++W KY ++ Y M LE ++ +++E KIL A+
Sbjct: 410 RARNFPNTLDFKDQQQW-KYHCQDYFESNLPAY---MENLEATAMEHQSDEKKMKILKAV 465
Query: 358 LMY 360
Y
Sbjct: 466 YDY 468
>gi|383178977|ref|YP_005456982.1| exonuclease I [Shigella sonnei 53G]
gi|418266339|ref|ZP_12885887.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella sonnei str. Moseley]
gi|397899961|gb|EJL16330.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella sonnei str. Moseley]
Length = 474
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|421079066|ref|ZP_15540011.1| Exodeoxyribonuclease I subunit C [Pectobacterium wasabiae CFBP
3304]
gi|401706253|gb|EJS96431.1| Exodeoxyribonuclease I subunit C [Pectobacterium wasabiae CFBP
3304]
Length = 475
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 199/371 (53%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQHGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 IAHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKLSALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ D
Sbjct: 233 MFGAARSNTSWVAPLAWHPDNRNAVIMCDLAGDMTPLLELDSQALRERLYTRRDALTADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P V++ L R D N+ + NN+ + +K+
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNLAL---LRNNSDVREKVVE 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + ++D LY+ F D + + I++ +P+ L ++ F + +LE L F
Sbjct: 349 LFAEAPAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLFFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--L 354
YRARNF TL +E +RW ++R + F ++ + + E+ L ++ + K+ L
Sbjct: 409 YRARNFPGTLDDREQQRWLQHRRAVFTPER-----LQNYLSELSDLYQRHEDDKEKMTQL 463
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 464 KALYAYAQELV 474
>gi|432489656|ref|ZP_19731531.1| exodeoxyribonuclease I [Escherichia coli KTE213]
gi|432839664|ref|ZP_20073151.1| exodeoxyribonuclease I [Escherichia coli KTE140]
gi|433203597|ref|ZP_20387374.1| exodeoxyribonuclease I [Escherichia coli KTE95]
gi|431020632|gb|ELD33973.1| exodeoxyribonuclease I [Escherichia coli KTE213]
gi|431389816|gb|ELG73527.1| exodeoxyribonuclease I [Escherichia coli KTE140]
gi|431721659|gb|ELJ85652.1| exodeoxyribonuclease I [Escherichia coli KTE95]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|331653435|ref|ZP_08354436.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli M718]
gi|331048284|gb|EGI20360.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli M718]
Length = 491
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F ++ + + EI+ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQIFTSEF-----LQGYAEEIQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|322514439|ref|ZP_08067481.1| exodeoxyribonuclease I [Actinobacillus ureae ATCC 25976]
gi|322119646|gb|EFX91708.1| exodeoxyribonuclease I [Actinobacillus ureae ATCC 25976]
Length = 515
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 201/378 (53%), Gaps = 29/378 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN ++PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFVDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVTDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIKKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + PI HP N+N ++ +L L + ++R +L KK E+
Sbjct: 232 FGNARGNTAWIAPIAWHPTNQNQVLCCDLSGYVSALLTDSAEELRTHLYTKKEELPENVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D +AILR++ P++L + F ++++E L+F
Sbjct: 349 FMEER--SFEASANVETTLYDGFFSPADKNNMAILRTLQPQELEHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKY-------RISRFYNKKNNLYNINMFYLEIESLLKKANE 348
YRAR++ ETLS E +W+KY + ++F +NL+ I+ N
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQFAESIDNLFQIH-----------HDNP 455
Query: 349 HDTKILNALLMYGKSITQ 366
K+L L Y I +
Sbjct: 456 EKVKLLEDLTAYAAQIAE 473
>gi|191167705|ref|ZP_03029513.1| exodeoxyribonuclease I [Escherichia coli B7A]
gi|209919475|ref|YP_002293559.1| exonuclease I [Escherichia coli SE11]
gi|416345632|ref|ZP_11679114.1| Exodeoxyribonuclease I [Escherichia coli EC4100B]
gi|417155076|ref|ZP_11993205.1| exodeoxyribonuclease I [Escherichia coli 96.0497]
gi|417159576|ref|ZP_11996604.1| exodeoxyribonuclease I [Escherichia coli 99.0741]
gi|417581529|ref|ZP_12232331.1| exodeoxyribonuclease I [Escherichia coli STEC_B2F1]
gi|417667439|ref|ZP_12316984.1| exodeoxyribonuclease I [Escherichia coli STEC_O31]
gi|432675121|ref|ZP_19910584.1| exodeoxyribonuclease I [Escherichia coli KTE142]
gi|432750454|ref|ZP_19985061.1| exodeoxyribonuclease I [Escherichia coli KTE29]
gi|190902218|gb|EDV61959.1| exodeoxyribonuclease I [Escherichia coli B7A]
gi|209912734|dbj|BAG77808.1| exonuclease I [Escherichia coli SE11]
gi|320198703|gb|EFW73303.1| Exodeoxyribonuclease I [Escherichia coli EC4100B]
gi|345337300|gb|EGW69732.1| exodeoxyribonuclease I [Escherichia coli STEC_B2F1]
gi|386168165|gb|EIH34681.1| exodeoxyribonuclease I [Escherichia coli 96.0497]
gi|386175027|gb|EIH47019.1| exodeoxyribonuclease I [Escherichia coli 99.0741]
gi|397784585|gb|EJK95438.1| exodeoxyribonuclease I [Escherichia coli STEC_O31]
gi|431214516|gb|ELF12274.1| exodeoxyribonuclease I [Escherichia coli KTE142]
gi|431297371|gb|ELF87029.1| exodeoxyribonuclease I [Escherichia coli KTE29]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432661246|ref|ZP_19896892.1| exodeoxyribonuclease I [Escherichia coli KTE111]
gi|431200362|gb|ELE99088.1| exodeoxyribonuclease I [Escherichia coli KTE111]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPTD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|410611302|ref|ZP_11322401.1| exodeoxyribonuclease I [Glaciecola psychrophila 170]
gi|410169153|dbj|GAC36290.1| exodeoxyribonuclease I [Glaciecola psychrophila 170]
Length = 476
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 205/371 (55%), Gaps = 13/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWD+I++ +A Y L P GI WP G PSFKL+ L+ N +
Sbjct: 111 LYRNFYDPYAREWQHGNSRWDIIDLARACYALRPEGINWPVNEAGLPSFKLQDLTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA+SDV AT+ +A+LI+ P+LF+++ +LR K VL +I + P +I+
Sbjct: 171 DHQGAHDAMSDVYATIAVAKLIKERQPKLFDYVFTLRDKIKVLEQIDYEKLTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
S H S + P+ +HP NKN +IT NL DP ++IR+ L K +E+
Sbjct: 231 IPSVHGCCSWIVPVGMHPSNKNAVITLNLALDPSPLFTLSADEIRNRLYTPKAMLEENEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+ P V++ K LS+ R D +N++ I N +I +K+
Sbjct: 291 RLPIKLLHINKCP-VLAPAKTLSTENAERLGIDRQGCLQNLQ---KIKANKHIIEKLQEV 346
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y L+ + LY F S D + + + L+ ++ FE+ +L L+F Y
Sbjct: 347 YVPTERRTSLDPEHALYSGGFFSSIDKEFMNQIVNSDVHGLTEISLPFEDDRLNTLLFRY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESL-LKKANEHDT-KI 353
RARN ++LS E+++W++YR +F++ ++ +I M F L++E L ++ A D I
Sbjct: 407 RARNIPQSLSEPEIEKWQRYRHFKFFDDESPA-SIKMPEFLLQLEQLSIEHARNPDKLTI 465
Query: 354 LNALLMYGKSI 364
L AL Y + +
Sbjct: 466 LKALYNYAQRL 476
>gi|334124739|ref|ZP_08498737.1| exodeoxyribonuclease I [Enterobacter hormaechei ATCC 49162]
gi|333388110|gb|EGK59295.1| exodeoxyribonuclease I [Enterobacter hormaechei ATCC 49162]
Length = 478
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 118 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGIHWPENEDGLPSFRLEHLTRANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 178 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K + +
Sbjct: 238 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKEALGDLP 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 298 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 353
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 354 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNY 413
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + + Y + M Y + E N +L
Sbjct: 414 RARNYPGTLDEAEQERWLQHRRNVFTPEFLSSYAQELEMLYGQYE-----GNAEKQALLK 468
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 469 ALYQYAQEIV 478
>gi|304413420|ref|ZP_07394893.1| exonuclease I [Candidatus Regiella insecticola LSR1]
gi|304284263|gb|EFL92656.1| exonuclease I [Candidatus Regiella insecticola LSR1]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 200/366 (54%), Gaps = 16/366 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYNWQNGNSRWDLLDVVRACYALRPEGINWPKNADGLPSFKLEHLAKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H KAHDA+SDV AT+ LA+L++ PRLF + R K + A I P +++
Sbjct: 174 IQHLKAHDAMSDVYATIELAKLVKQAQPRLFKYFYHHRSKHKIKALIDIENMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S ISL+ P+ HP NKN +I +L D L D+N +R++L K+
Sbjct: 234 MFGVRRSNISLVAPLAWHPENKNAVIVCDLAADISPLSL-DVNTLREHLYTPKDPLNPQQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ ++H+N+ PI ++ + R K DL ++ S+ N I +K+
Sbjct: 293 ITIPLKLVHINKCPI-LAPVNTWREKETKRLKIDLQYCLNQLE---SLRQNPQIKEKVNA 348
Query: 238 DYKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+K + ++ N+D +LY F + D+ + ++ SP+ L +NFCF++ +LE L+F
Sbjct: 349 LFKQMTARPKVNNVDAQLYCGFFNDTDHNTIKKIQQTSPQNLPALNFCFQDPRLETLLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
+RARN+ TL E +R +YR +K I + L++ L + NE + +L
Sbjct: 409 FRARNYHNTLDDTEQRRLLEYRKEVLSPEK-----IKEYILQLNQLCYQYQNNEEKSSLL 463
Query: 355 NALLMY 360
+LL Y
Sbjct: 464 KSLLDY 469
>gi|417232270|ref|ZP_12033668.1| exodeoxyribonuclease I [Escherichia coli 5.0959]
gi|418042127|ref|ZP_12680336.1| exonuclease [Escherichia coli W26]
gi|383475072|gb|EID67042.1| exonuclease [Escherichia coli W26]
gi|386205269|gb|EII09780.1| exodeoxyribonuclease I [Escherichia coli 5.0959]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|422832003|ref|ZP_16880131.1| exodeoxyribonuclease I [Escherichia coli B093]
gi|371615860|gb|EHO04242.1| exodeoxyribonuclease I [Escherichia coli B093]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|395232854|ref|ZP_10411101.1| exonuclease I [Enterobacter sp. Ag1]
gi|394732634|gb|EJF32291.1| exonuclease I [Enterobacter sp. Ag1]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 195/370 (52%), Gaps = 20/370 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF ++ S R K+ + I P +P +++
Sbjct: 174 IEHANAHDAMSDVYATIAMAQLVKTRQPRLFEYLYSHRSKQKLQTLIDIPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF ++ S + P+ HP N+N +I +L D L D +R+ L K ++
Sbjct: 234 MFGAQRGNTSWIAPLAWHPDNRNAVIMVDLAGDISPLLALDAATLRERLYTPKAELGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R + N+K + + + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAVANTLRPEDAERLGINRQQCLDNLKV---LREHPEVREKVVAL 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFVPSD---NVDAQLYNGFFSDADRAAMRIVLQTDPQNLPALDITFADKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARN+ TLS E RW +YR + + + LE+ESL + ++
Sbjct: 407 FNYRARNWPGTLSEDEQNRWLQYRRDVLSQEA-----LQAYALELESLYNQHEGDKEKMA 461
Query: 353 ILNALLMYGK 362
+L +L Y +
Sbjct: 462 LLKSLFEYAQ 471
>gi|261492018|ref|ZP_05988593.1| exodeoxyribonuclease I [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261312301|gb|EEY13429.1| exodeoxyribonuclease I [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 515
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 198/372 (53%), Gaps = 15/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI WP G PSFKLE+L+ N +
Sbjct: 112 FFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F +LR KK V I P +++ M
Sbjct: 172 AHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ H N+N +I +L D L + +R L K++ E+
Sbjct: 232 LGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLRQRLYTKRDELAENEL 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ PI+ +L N R D +N+K + + I +K+
Sbjct: 292 SVPLKLVHINKCPILAPAKTLLPENAE-RLGIDRALCLENLKTLKA--QKSLIREKVIEI 348
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N++ LY+ F S D +AILR++ P+ L+N FE+ ++E L+F Y
Sbjct: 349 FNEERTFEPSTNVENTLYDGFFSPADKNNMAILRTLPPEDLANHGLKFEDPRVEALLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RAR++ +TLS E +W+K+ + K F I+ L ++ N K+L
Sbjct: 409 RARHYPQTLSRAEQIKWQKHCNQQIEAK------AEQFAQSIDDLFQQHHDNPEKVKLLE 462
Query: 356 ALLMYGKSITQK 367
L Y + I+Q+
Sbjct: 463 NLTAYAEQISQQ 474
>gi|419306846|ref|ZP_13848746.1| exodeoxyribonuclease I [Escherichia coli DEC11D]
gi|419311844|ref|ZP_13853706.1| exodeoxyribonuclease I [Escherichia coli DEC11E]
gi|378148833|gb|EHX09966.1| exodeoxyribonuclease I [Escherichia coli DEC11D]
gi|378157472|gb|EHX18503.1| exodeoxyribonuclease I [Escherichia coli DEC11E]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A++++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKMVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|157155858|ref|YP_001463362.1| exonuclease I [Escherichia coli E24377A]
gi|432765414|ref|ZP_19999852.1| exodeoxyribonuclease I [Escherichia coli KTE48]
gi|157077888|gb|ABV17596.1| exodeoxyribonuclease I [Escherichia coli E24377A]
gi|431309589|gb|ELF97782.1| exodeoxyribonuclease I [Escherichia coli KTE48]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLIALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432450124|ref|ZP_19692390.1| exodeoxyribonuclease I [Escherichia coli KTE193]
gi|433033802|ref|ZP_20221521.1| exodeoxyribonuclease I [Escherichia coli KTE112]
gi|430980247|gb|ELC97009.1| exodeoxyribonuclease I [Escherichia coli KTE193]
gi|431551779|gb|ELI25749.1| exodeoxyribonuclease I [Escherichia coli KTE112]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGNNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|407469909|ref|YP_006783648.1| exonuclease I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481426|ref|YP_006778575.1| exonuclease I [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481976|ref|YP_006769522.1| exonuclease I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417805581|ref|ZP_12452531.1| exonuclease I [Escherichia coli O104:H4 str. LB226692]
gi|340739949|gb|EGR74180.1| exonuclease I [Escherichia coli O104:H4 str. LB226692]
gi|406777138|gb|AFS56562.1| exonuclease I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053723|gb|AFS73774.1| exonuclease I [Escherichia coli O104:H4 str. 2011C-3493]
gi|407065944|gb|AFS86991.1| exonuclease I [Escherichia coli O104:H4 str. 2009EL-2071]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|429093986|ref|ZP_19156547.1| Exodeoxyribonuclease I [Cronobacter dublinensis 1210]
gi|426741020|emb|CCJ82660.1| Exodeoxyribonuclease I [Cronobacter dublinensis 1210]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 192/369 (52%), Gaps = 12/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVHATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDIVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + PI HP N+N +I +L D L D + +R+ L K +D
Sbjct: 234 MFGAWRGNTSWIAPIAWHPDNRNAVIVVDLAGDISPLLELDADALRERLYTPKAVLGDDS 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K + +F +
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRAAPQVREKLVALFAE 352
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F YR
Sbjct: 353 APPFPP--TSNVDAQLYDGFFSDADRAAMRIVLQTPPQNLPALDITFVDKRIEKLLFNYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILNA 356
ARNF TLS E +RW +R F + Y + M Y + ES ++ T +L A
Sbjct: 411 ARNFPGTLSEPEQQRWLNHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLKA 465
Query: 357 LLMYGKSIT 365
L Y + I
Sbjct: 466 LYQYAQEIV 474
>gi|422355061|ref|ZP_16435782.1| exonuclease [Escherichia coli MS 117-3]
gi|324016993|gb|EGB86212.1| exonuclease [Escherichia coli MS 117-3]
Length = 499
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|109898489|ref|YP_661744.1| exodeoxyribonuclease I [Pseudoalteromonas atlantica T6c]
gi|109700770|gb|ABG40690.1| Exodeoxyribonuclease I subunit C [Pseudoalteromonas atlantica T6c]
Length = 476
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 200/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I+V++A Y L P GI WP K++G PSFKLE LS NN+
Sbjct: 111 LYRNFYDPYGREWRNGNSRWDIIDVVRACYALRPEGIEWPLKDDGSPSFKLEDLSKANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+G+A+L++ P+L++++ +LR KK V+A P +I+
Sbjct: 171 EHAAAHDAMSDVHATIGMAKLVKTAQPKLYDYLFNLRFKKNVIALFDINAHTPLVHISSK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP NKN I NL D + + +++I + L N +E
Sbjct: 231 LPAINGCCTWIAPVAQHPTNKNAFIVVNLALDIQPLIDLSVDEIIEKLYTPSNMLEEGEQ 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI +IH+N+SP VI+ K L + R + N+K + + + K+
Sbjct: 291 RLPIKLIHVNKSP-VIAPAKTLDESNAARLGINREVCLSNLKV---LKQHPELVAKLIAV 346
Query: 239 YKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + E + D LY+ F S KD + + S ++L+++ FE+ +L+ L+F Y
Sbjct: 347 HSTTRDNKEQDADHALYSGAFFSPKDRALMDQVLHSSTEQLADLTLPFEDPRLDNLLFYY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK---KANEHDTKIL 354
+ RNF +L+ +EL+RW+ +R R + + Y++ LL ++N IL
Sbjct: 407 KGRNFPTSLNEQELQRWQNHRKFRLLDDTSPSSITMTDYVQTLELLSEQYQSNNDKLAIL 466
Query: 355 NALLMYGKSI 364
AL Y + +
Sbjct: 467 KALYTYAEQL 476
>gi|74312553|ref|YP_310972.1| exonuclease I [Shigella sonnei Ss046]
gi|73856030|gb|AAZ88737.1| deoxyribophosphodiesterase [Shigella sonnei Ss046]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|422786596|ref|ZP_16839335.1| exonuclease [Escherichia coli H489]
gi|323961779|gb|EGB57380.1| exonuclease [Escherichia coli H489]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|422774111|ref|ZP_16827767.1| exonuclease [Escherichia coli H120]
gi|323948385|gb|EGB44370.1| exonuclease [Escherichia coli H120]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|419700860|ref|ZP_14228463.1| exonuclease I [Escherichia coli SCI-07]
gi|425278299|ref|ZP_18669551.1| exonuclease [Escherichia coli ARS4.2123]
gi|425300707|ref|ZP_18690646.1| exonuclease [Escherichia coli 07798]
gi|380348109|gb|EIA36394.1| exonuclease I [Escherichia coli SCI-07]
gi|408202418|gb|EKI27530.1| exonuclease [Escherichia coli ARS4.2123]
gi|408216142|gb|EKI40476.1| exonuclease [Escherichia coli 07798]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|422781101|ref|ZP_16833886.1| exonuclease [Escherichia coli TW10509]
gi|323977819|gb|EGB72905.1| exonuclease [Escherichia coli TW10509]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|260582707|ref|ZP_05850495.1| exodeoxyribonuclease I [Haemophilus influenzae NT127]
gi|260094273|gb|EEW78173.1| exodeoxyribonuclease I [Haemophilus influenzae NT127]
Length = 473
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 190/353 (53%), Gaps = 18/353 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + I P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLIDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS + FE++++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHSLAFEDRRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK-ANEH 349
RAR+F +TL+ E +W+KYR ++ +E ES L++ A EH
Sbjct: 409 RARHFYKTLTRAEQIKWQKYRQNKLEKSA----------VEFESSLQRLAEEH 451
>gi|432381753|ref|ZP_19624697.1| exodeoxyribonuclease I [Escherichia coli KTE15]
gi|432611824|ref|ZP_19847986.1| exodeoxyribonuclease I [Escherichia coli KTE72]
gi|432646586|ref|ZP_19882376.1| exodeoxyribonuclease I [Escherichia coli KTE86]
gi|432656167|ref|ZP_19891872.1| exodeoxyribonuclease I [Escherichia coli KTE93]
gi|432938366|ref|ZP_20136644.1| exodeoxyribonuclease I [Escherichia coli KTE183]
gi|432985772|ref|ZP_20174496.1| exodeoxyribonuclease I [Escherichia coli KTE215]
gi|433101561|ref|ZP_20287647.1| exodeoxyribonuclease I [Escherichia coli KTE145]
gi|433188798|ref|ZP_20372896.1| exodeoxyribonuclease I [Escherichia coli KTE88]
gi|430907952|gb|ELC29447.1| exodeoxyribonuclease I [Escherichia coli KTE15]
gi|431147998|gb|ELE49289.1| exodeoxyribonuclease I [Escherichia coli KTE72]
gi|431180623|gb|ELE80510.1| exodeoxyribonuclease I [Escherichia coli KTE86]
gi|431191495|gb|ELE90878.1| exodeoxyribonuclease I [Escherichia coli KTE93]
gi|431463101|gb|ELH43294.1| exodeoxyribonuclease I [Escherichia coli KTE183]
gi|431501209|gb|ELH80195.1| exodeoxyribonuclease I [Escherichia coli KTE215]
gi|431619155|gb|ELI88079.1| exodeoxyribonuclease I [Escherichia coli KTE145]
gi|431705504|gb|ELJ70094.1| exodeoxyribonuclease I [Escherichia coli KTE88]
Length = 475
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAQEIV 475
>gi|419763847|ref|ZP_14290087.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|397742430|gb|EJK89648.1| exonuclease I [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
Length = 474
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ +A+L++ PRLF+++ S R K+ + I P +P +++
Sbjct: 174 IEHQNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L + +
Sbjct: 234 MFGAARGNTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 294 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGISIQRCLEN---AQLLRANPQVREKVVAV 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + N+D +LYN F S D + I+ P+ L ++ F ++++E L+F Y
Sbjct: 350 YAEAEPFVPSENVDAQLYNGFFSDADRSAMKIVLETEPRNLPALDITFADQRIERLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDEHEQQRWLEHRRQVF 434
>gi|53729178|ref|ZP_00134021.2| COG2925: Exonuclease I [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|126208153|ref|YP_001053378.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 5b str. L20]
gi|126096945|gb|ABN73773.1| exodeoxyribonuclease I [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 514
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 199/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEAVA 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D +AILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|410861335|ref|YP_006976569.1| exodeoxyribonuclease I [Alteromonas macleodii AltDE1]
gi|410818597|gb|AFV85214.1| exodeoxyribonuclease I [Alteromonas macleodii AltDE1]
Length = 495
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 200/371 (53%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I+V +A Y L P GI WP + +G PSF+LE L+ NN
Sbjct: 129 LFYRNFYDPYSREWRNGNSRWDIIDVARACYALRPDGINWPLREDGSPSFRLEALTAANN 188
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DV AT+ LA+LI+ PRLF++ LSLR K V+ +I +I+
Sbjct: 189 IGHDNAHDALNDVYATISLAKLIKEKQPRLFDYALSLRNKHTVMQQIDLSKPSVLLHISS 248
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
+ + + PI HP N N I +L HD L + ++I+ L +++ +
Sbjct: 249 KLPASQGCCTWVMPIAKHPTNSNAFIVIDLSHDIDSVLNDSADEIKQALYAPSDTYDDAR 308
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
E + +IH+NRSP I+ K ++ + R D N K +S + + KI
Sbjct: 309 ERPGLKLIHVNRSPF-ITTAKAMTEDNAQRLGLDRERCLDNYKKLASTPD---LVSKIVA 364
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y+ EL+ID LY F+S +D + + P+ L+ +++ L++L+F
Sbjct: 365 IYEEERHSSELDIDHALYSGGFLSDEDRRWCENVINAKPEDLATFGDKTQHEGLKKLLFR 424
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ TL+ E+ +W+ +R +R + + + + + +ESL + +++ K I
Sbjct: 425 YRARNYPNTLTADEMAKWQYHRQARLTDPDFHGSITLENYMMRLESLAHEHSDNPEKQAI 484
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 485 LRALYQYAENL 495
>gi|218558892|ref|YP_002391805.1| exonuclease I [Escherichia coli S88]
gi|432363047|ref|ZP_19606214.1| exodeoxyribonuclease I [Escherichia coli KTE5]
gi|218365661|emb|CAR03398.1| exonuclease I [Escherichia coli S88]
gi|430886266|gb|ELC09121.1| exodeoxyribonuclease I [Escherichia coli KTE5]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIHWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|432518089|ref|ZP_19755279.1| exodeoxyribonuclease I [Escherichia coli KTE228]
gi|432631762|ref|ZP_19867690.1| exodeoxyribonuclease I [Escherichia coli KTE80]
gi|432770982|ref|ZP_20005323.1| exodeoxyribonuclease I [Escherichia coli KTE50]
gi|433159042|ref|ZP_20343884.1| exodeoxyribonuclease I [Escherichia coli KTE177]
gi|431051280|gb|ELD60952.1| exodeoxyribonuclease I [Escherichia coli KTE228]
gi|431170623|gb|ELE70813.1| exodeoxyribonuclease I [Escherichia coli KTE80]
gi|431315221|gb|ELG03146.1| exodeoxyribonuclease I [Escherichia coli KTE50]
gi|431678415|gb|ELJ44413.1| exodeoxyribonuclease I [Escherichia coli KTE177]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWSGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEL-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|417634934|ref|ZP_12285148.1| exodeoxyribonuclease I [Escherichia coli STEC_S1191]
gi|345388425|gb|EGX18236.1| exodeoxyribonuclease I [Escherichia coli STEC_S1191]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|414576580|ref|ZP_11433764.1| exodeoxyribonuclease I [Shigella sonnei 3233-85]
gi|415844742|ref|ZP_11524484.1| exodeoxyribonuclease I [Shigella sonnei 53G]
gi|420359078|ref|ZP_14860054.1| exodeoxyribonuclease I [Shigella sonnei 3226-85]
gi|323168854|gb|EFZ54534.1| exodeoxyribonuclease I [Shigella sonnei 53G]
gi|391282679|gb|EIQ41309.1| exodeoxyribonuclease I [Shigella sonnei 3226-85]
gi|391284998|gb|EIQ43585.1| exodeoxyribonuclease I [Shigella sonnei 3233-85]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|145207002|gb|ABP37869.1| EpsE [Pseudoalteromonas sp. SM9913]
Length = 356
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 176/313 (56%), Gaps = 8/313 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYERE+KNN SRWD+I++++A Y L P GI WP K +G PSFKLEHL+ N +
Sbjct: 42 FYRNFYDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGI 101
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P+L++F SLR KK + + P + +
Sbjct: 102 EHAAAHDALSDVTATIALAKLIKEKQPKLYHFFFSLRNKKALAELVDVFNMTPLVHTSSR 161
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-DI 180
+ + + P+ HP+NKN +I ++L +P+ L ++ ++R L K+ E D+
Sbjct: 162 IPATQGCTTWVAPMSFHPVNKNAVICFDLTQNPQVLLDLNVEQLRKRLYTKRIDLAEGDL 221
Query: 181 PIS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++HLN+ PI+ +L N R D N+ + NT + K+
Sbjct: 222 PVGLKLVHLNKCPILAPAKTLLPENAA-RLGIDREQCLANLAILKA---NTELRDKVTEV 277
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N+D LY+ F S D K AI+R P+ L+++ FE+ K L+F Y
Sbjct: 278 FNEQGDYSATTNVDYLLYDGFTSHADKAKFAIIRDAKPEDLASLKLEFEDPKFNTLLFRY 337
Query: 298 RARNFIETLSYKE 310
RARN+ ETL+ E
Sbjct: 338 RARNWPETLNPPE 350
>gi|432441507|ref|ZP_19683847.1| exodeoxyribonuclease I [Escherichia coli KTE189]
gi|433014274|ref|ZP_20202623.1| exodeoxyribonuclease I [Escherichia coli KTE104]
gi|430965961|gb|ELC83369.1| exodeoxyribonuclease I [Escherichia coli KTE189]
gi|431530783|gb|ELI07460.1| exodeoxyribonuclease I [Escherichia coli KTE104]
Length = 474
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 199/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFTPSHNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + EI+ L ++ + K+ L
Sbjct: 410 RARNFPGTLDYAEQQRWLEHRRQIFTPE-----FLQGYAEEIQMLAQQYADDKEKVALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALWQYAEEI 473
>gi|389840443|ref|YP_006342527.1| exonuclease I [Cronobacter sakazakii ES15]
gi|387850919|gb|AFJ99016.1| exonuclease I [Cronobacter sakazakii ES15]
Length = 491
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN NPY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 130 IFYRNFYNPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 189
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 190 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 249
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 250 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 309
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 310 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 368
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 369 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 425
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 426 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 480
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 481 ALYQYAQEI 489
>gi|300920252|ref|ZP_07136698.1| exonuclease [Escherichia coli MS 115-1]
gi|301018905|ref|ZP_07183135.1| exonuclease [Escherichia coli MS 196-1]
gi|299882459|gb|EFI90670.1| exonuclease [Escherichia coli MS 196-1]
gi|300412754|gb|EFJ96064.1| exonuclease [Escherichia coli MS 115-1]
Length = 499
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|432875543|ref|ZP_20093816.1| exodeoxyribonuclease I [Escherichia coli KTE154]
gi|431420489|gb|ELH02773.1| exodeoxyribonuclease I [Escherichia coli KTE154]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|432832013|ref|ZP_20065587.1| exodeoxyribonuclease I [Escherichia coli KTE135]
gi|431375983|gb|ELG61306.1| exodeoxyribonuclease I [Escherichia coli KTE135]
Length = 474
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|419914251|ref|ZP_14432655.1| exonuclease I [Escherichia coli KD1]
gi|388387299|gb|EIL48922.1| exonuclease I [Escherichia coli KD1]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 200/370 (54%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTTWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ LS ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLSALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|254362095|ref|ZP_04978217.1| exodeoxyribonuclease I [Mannheimia haemolytica PHL213]
gi|452744577|ref|ZP_21944420.1| exonuclease I [Mannheimia haemolytica serotype 6 str. H23]
gi|153093654|gb|EDN74613.1| exodeoxyribonuclease I [Mannheimia haemolytica PHL213]
gi|452087353|gb|EME03733.1| exonuclease I [Mannheimia haemolytica serotype 6 str. H23]
Length = 515
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 198/372 (53%), Gaps = 15/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI WP G PSFKLE+L+ N +
Sbjct: 112 FFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF+F +LR KK V I P +++ M
Sbjct: 172 AHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ H N+N +I +L D L + +R L K++ E+
Sbjct: 232 LGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLRQRLYTKRDELAENEL 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ PI+ +L N R D +N+K + + I +K+
Sbjct: 292 PVPLKLVHINKCPILAPAKTLLPENAE-RLGIDRALCLENLKTLKA--QKSLIREKVIEI 348
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + N++ LY+ F S D +AILR++ P+ L+N FE+ ++E L+F Y
Sbjct: 349 FNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANHGLKFEDPRVEALLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RAR++ +TLS E +W+K+ + K F I+ L ++ N K+L
Sbjct: 409 RARHYPQTLSRAEQIKWQKHCNQQIEAK------AAQFAQSIDDLFQQHHDNPEKVKLLE 462
Query: 356 ALLMYGKSITQK 367
L Y + I+Q+
Sbjct: 463 NLTAYAEQISQQ 474
>gi|419839199|ref|ZP_14362617.1| exonuclease C-terminal domain protein [Haemophilus haemolyticus
HK386]
gi|386909910|gb|EIJ74574.1| exonuclease C-terminal domain protein [Haemophilus haemolyticus
HK386]
Length = 473
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 178/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMSPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVSDIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWRKYR 429
>gi|345432674|dbj|BAK69004.1| exonuclease I [Escherichia coli O157:HNM]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPSNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|293410372|ref|ZP_06653948.1| sbcB [Escherichia coli B354]
gi|291470840|gb|EFF13324.1| sbcB [Escherichia coli B354]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATISMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|345299936|ref|YP_004829294.1| Exonuclease domain-containing protein [Enterobacter asburiae LF7a]
gi|345093873|gb|AEN65509.1| Exonuclease domain protein [Enterobacter asburiae LF7a]
Length = 474
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K + I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKAAQPRLFEYLLSHRSKHKLTTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L KN +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPEVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ + P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVASENVDAQLYNGFFSDADRTAMNIILNTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKILN 355
RARN+ TL E +RW ++R + F + + + E+ESL + N +L
Sbjct: 410 RARNYPGTLDEVEQERWLQHRRNVFTPEY-----LQHYAQELESLYNQYEGNAEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALFQYAQEIV 474
>gi|312172834|emb|CBX81090.1| exodeoxyribonuclease I [Erwinia amylovora ATCC BAA-2158]
Length = 475
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++V++A Y L P GITWP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAWSWQHGNSRWDLLDVMRACYALRPDGITWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PRL++F+ S R K+ + I P +P +I+
Sbjct: 174 VAHENAHDAMSDVYATIAMAKLVKEKQPRLYDFLFSHRNKQKITTLIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + S + P+ HP N+N LIT +L D L D + +R L +++
Sbjct: 234 MFGAARGNASWIAPLAWHPDNRNALITCDLDADMAPLLELDADALRARLYTRRDELNGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P+V + L R D N+ + + + +K+
Sbjct: 294 PVPLKLVHINKCPVV-APANTLRPEDAERIGIDRQRCLDNLAL---LRQHPEVREKVVTL 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD ++D ++YN F S D + I+R + + L ++ F + ++E+L+
Sbjct: 350 FAEAPPFTPSD---DVDSQIYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F +RARNF TL KE +RW ++R F ++ + + E+E L + ++ +
Sbjct: 407 FRFRARNFPGTLDDKEQQRWLQHRRQMFSPER-----VQGYVQELEMLFNQYEGDQARQE 461
Query: 353 ILNALLMYGKSIT 365
L AL Y + +
Sbjct: 462 QLKALFAYMQELV 474
>gi|260580789|ref|ZP_05848615.1| exonuclease I [Haemophilus influenzae RdAW]
gi|260092606|gb|EEW76543.1| exonuclease I [Haemophilus influenzae RdAW]
Length = 473
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 178/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N++
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANSI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +WKKYR
Sbjct: 409 RARHFYKTLTRAEQIKWKKYR 429
>gi|387769533|ref|ZP_10125796.1| exonuclease C-terminal domain protein [Pasteurella bettyae CCUG
2042]
gi|386906842|gb|EIJ71567.1| exonuclease C-terminal domain protein [Pasteurella bettyae CCUG
2042]
Length = 474
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 185/322 (57%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP G P+F+LE+L+ N++
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRATYALRPEGINWPVDEEGVPNFRLENLTKENDI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK V I P +++ M
Sbjct: 173 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEVEKLINTGEMTPIVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + M PI HP N+N +I +L + L +++ L KK +E+
Sbjct: 233 LGNYRGNTAWMAPIAWHPTNQNAVIACDLSANIDDLLSKSAVELQKNLYTKKAELEENGV 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N + +N A+ ++ + + N+ I +K+
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPENAQ---RLGINRAY-CLENLAKLRNSLDIREKVLE 348
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ ++ N++ ELYN F + D +AILR + +KL+N FE+K+++EL+F
Sbjct: 349 TFTEERQFEISDNVETELYNGFFNTADKNNMAILRDLPSEKLANSGLSFEDKRIDELLFH 408
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 409 YRARHFYKTLTRAEQIKWQKYR 430
>gi|417137854|ref|ZP_11981619.1| exodeoxyribonuclease I [Escherichia coli 97.0259]
gi|417308476|ref|ZP_12095324.1| Exodeoxyribonuclease I [Escherichia coli PCN033]
gi|432869300|ref|ZP_20089985.1| exodeoxyribonuclease I [Escherichia coli KTE147]
gi|338769912|gb|EGP24684.1| Exodeoxyribonuclease I [Escherichia coli PCN033]
gi|386158600|gb|EIH14935.1| exodeoxyribonuclease I [Escherichia coli 97.0259]
gi|431410581|gb|ELG93738.1| exodeoxyribonuclease I [Escherichia coli KTE147]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|254786919|ref|YP_003074348.1| exonuclease I [Teredinibacter turnerae T7901]
gi|237686146|gb|ACR13410.1| exodeoxyribonuclease I [Teredinibacter turnerae T7901]
Length = 478
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 188/347 (54%), Gaps = 15/347 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++ Y L P GI WP G+PSFKLE+L+ N +
Sbjct: 109 LFRNYFDPYEREWRNGNSRWDIIDMVRLTYALRPEGIEWPLVE-GRPSFKLENLTQANGI 167
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA SDV AT+ LA+LI+ P+L+ ++ K+ + I +P +++
Sbjct: 168 AHQAAHDAFSDVEATIALAKLIKEKQPQLYQYVRDYSGKRKLAELIDVQSRKPLLHVSSR 227
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++H +L+ P+ +HP+NKN +I ++L DP+ + ++ L + E
Sbjct: 228 FSAEHGCSALVAPLAMHPVNKNAVIVFDLSVDPQPLIDASAEEVLQRLYVAADDLPEGVE 287
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKKI 235
IP+ ++HLN+ PI ++ K+L R K D + + ++ ++CA + K+
Sbjct: 288 RIPLKLVHLNKCPI-LATPKLLDETAATRLKIDKSLSEQHWQKLQCAD-------LKSKL 339
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ N+ + +++LYN FI D LR+ + ++ NF FE+ +L ++
Sbjct: 340 TAVFSQNDFPPRQDPEQQLYNGFIGDADKRTSVQLRTATAAQIQQHNFVFEDARLSAMVL 399
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL 342
Y+ARNF ETLS +E W ++ R + + + F + +L
Sbjct: 400 RYKARNFPETLSDEEAAEWSEHVRLRLMDGGDGCLSYAEFQSTVANL 446
>gi|421775646|ref|ZP_16212254.1| exonuclease [Escherichia coli AD30]
gi|422820297|ref|ZP_16868505.1| exodeoxyribonuclease I [Escherichia coli M919]
gi|432534286|ref|ZP_19771262.1| exodeoxyribonuclease I [Escherichia coli KTE234]
gi|432564230|ref|ZP_19800817.1| exodeoxyribonuclease I [Escherichia coli KTE51]
gi|432850971|ref|ZP_20081666.1| exodeoxyribonuclease I [Escherichia coli KTE144]
gi|385536154|gb|EIF83062.1| exodeoxyribonuclease I [Escherichia coli M919]
gi|408459115|gb|EKJ82898.1| exonuclease [Escherichia coli AD30]
gi|431060513|gb|ELD69839.1| exodeoxyribonuclease I [Escherichia coli KTE234]
gi|431093979|gb|ELD99630.1| exodeoxyribonuclease I [Escherichia coli KTE51]
gi|431400293|gb|ELG83675.1| exodeoxyribonuclease I [Escherichia coli KTE144]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|387888784|ref|YP_006319082.1| exodeoxyribonuclease I [Escherichia blattae DSM 4481]
gi|414592850|ref|ZP_11442499.1| exodeoxyribonuclease I [Escherichia blattae NBRC 105725]
gi|386923617|gb|AFJ46571.1| exodeoxyribonuclease I [Escherichia blattae DSM 4481]
gi|403196331|dbj|GAB80151.1| exodeoxyribonuclease I [Escherichia blattae NBRC 105725]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 193/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNGNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTAANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +AR I+ + PRLF+++L+ R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMARKIKASQPRLFDYLLNYRGKQKLATLIDIVQMQPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D D + +R+ L K+ +
Sbjct: 234 MFGAWRGNTSLIAPLAWHPDNRNAVIVVDLAADISPLFDLDADALRERLYTPKSELGDAL 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P++ + L R D N+ + N + +KI
Sbjct: 294 PVPVKLVHLNKCPVLAKD-NALRPQDAQRLGIDRQHCMDNLALLRA---NPQLREKIVAL 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + + N+D +LYN F D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 YARAEPFAVPDNVDSQLYNGFFGDADKTAMKIILETEPQNLPALDITFADKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS E +RW ++R F Y + M Y + E +K +L
Sbjct: 410 RARNFPGTLSEAEQQRWLEHRREVFSPGALEAYARELEMLYTQYEGDGEK-----IALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 465 ALYQYVQQLV 474
>gi|307249878|ref|ZP_07531852.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858067|gb|EFM90149.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 514
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVTDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D +AILR++ P++L++ F +++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFAGERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSVQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|432616967|ref|ZP_19853088.1| exodeoxyribonuclease I [Escherichia coli KTE75]
gi|431155207|gb|ELE55968.1| exodeoxyribonuclease I [Escherichia coli KTE75]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|301648514|ref|ZP_07248238.1| exonuclease [Escherichia coli MS 146-1]
gi|301073417|gb|EFK88223.1| exonuclease [Escherichia coli MS 146-1]
Length = 491
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ LA+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIALAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTVKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|218695636|ref|YP_002403303.1| exonuclease I [Escherichia coli 55989]
gi|417613450|ref|ZP_12263911.1| exodeoxyribonuclease I [Escherichia coli STEC_EH250]
gi|417863672|ref|ZP_12508720.1| hypothetical protein C22711_0605 [Escherichia coli O104:H4 str.
C227-11]
gi|422988143|ref|ZP_16978916.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. C227-11]
gi|422995034|ref|ZP_16985798.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. C236-11]
gi|423000109|ref|ZP_16990863.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 09-7901]
gi|423003778|ref|ZP_16994524.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 04-8351]
gi|423010351|ref|ZP_17001085.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-3677]
gi|423019578|ref|ZP_17010287.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4404]
gi|423024744|ref|ZP_17015441.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4522]
gi|423030565|ref|ZP_17021253.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4623]
gi|423038392|ref|ZP_17029066.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423043511|ref|ZP_17034178.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045240|ref|ZP_17035900.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423053779|ref|ZP_17042586.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423060754|ref|ZP_17049550.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429719619|ref|ZP_19254551.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771505|ref|ZP_19303528.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02030]
gi|429781437|ref|ZP_19313366.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785085|ref|ZP_19316990.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02092]
gi|429791066|ref|ZP_19322923.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02093]
gi|429796892|ref|ZP_19328701.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02281]
gi|429798491|ref|ZP_19330292.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02318]
gi|429807004|ref|ZP_19338731.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02913]
gi|429811837|ref|ZP_19343527.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-03439]
gi|429817424|ref|ZP_19349065.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-04080]
gi|429822635|ref|ZP_19354233.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-03943]
gi|429904015|ref|ZP_19369994.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908151|ref|ZP_19374115.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914023|ref|ZP_19379971.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919054|ref|ZP_19384986.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-5604]
gi|429924873|ref|ZP_19390787.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4986]
gi|429928810|ref|ZP_19394712.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935349|ref|ZP_19401235.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941029|ref|ZP_19406903.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-5603]
gi|429943709|ref|ZP_19409572.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951306|ref|ZP_19417152.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec12-0465]
gi|429954620|ref|ZP_19420452.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec12-0466]
gi|218352368|emb|CAU98142.1| exonuclease I [Escherichia coli 55989]
gi|341916961|gb|EGT66578.1| hypothetical protein C22711_0605 [Escherichia coli O104:H4 str.
C227-11]
gi|345362961|gb|EGW95106.1| exodeoxyribonuclease I [Escherichia coli STEC_EH250]
gi|354861869|gb|EHF22307.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. C236-11]
gi|354867154|gb|EHF27576.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. C227-11]
gi|354869225|gb|EHF29635.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 04-8351]
gi|354873080|gb|EHF33457.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 09-7901]
gi|354879834|gb|EHF40170.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-3677]
gi|354890079|gb|EHF50324.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4404]
gi|354892852|gb|EHF53056.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4522]
gi|354895551|gb|EHF55737.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897263|gb|EHF57421.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4623]
gi|354899475|gb|EHF59623.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912676|gb|EHF72674.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915681|gb|EHF75657.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354918187|gb|EHF78144.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-4632 C4]
gi|429346014|gb|EKY82795.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02033-1]
gi|429349862|gb|EKY86598.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02092]
gi|429360988|gb|EKY97645.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02030]
gi|429362419|gb|EKY99066.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02093]
gi|429363378|gb|EKZ00020.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02281]
gi|429365808|gb|EKZ02420.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02318]
gi|429376663|gb|EKZ13191.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-02913]
gi|429380705|gb|EKZ17194.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-03943]
gi|429381151|gb|EKZ17639.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-03439]
gi|429392926|gb|EKZ29325.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. 11-04080]
gi|429405956|gb|EKZ42218.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4984]
gi|429407571|gb|EKZ43823.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410987|gb|EKZ47203.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414253|gb|EKZ50428.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4987]
gi|429422432|gb|EKZ58551.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4986]
gi|429429196|gb|EKZ65265.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432865|gb|EKZ68901.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436089|gb|EKZ72105.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438294|gb|EKZ74287.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447913|gb|EKZ83830.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451633|gb|EKZ87521.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec11-9941]
gi|429457577|gb|EKZ93415.1| exodeoxyribonuclease I [Escherichia coli O104:H4 str. Ec12-0466]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|300947322|ref|ZP_07161523.1| exonuclease [Escherichia coli MS 116-1]
gi|300453074|gb|EFK16694.1| exonuclease [Escherichia coli MS 116-1]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + ++ I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDANRLGINRQHCLDNLKI---LRENPQVREEVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|90578663|ref|ZP_01234473.1| putative exonuclease I [Photobacterium angustum S14]
gi|90439496|gb|EAS64677.1| putative exonuclease I [Photobacterium angustum S14]
Length = 473
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 192/366 (52%), Gaps = 18/366 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL+++++ Y L P G+ WP + +PSFKLE LS N +
Sbjct: 114 LYRNFFDPYGWAWQNGNSRWDLLDIMRTCYALRPEGVNWPLDDEDRPSFKLEKLSIANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++I+ N P+LF+++ LR K+ + I P +I+ M
Sbjct: 174 EHANAHDAMADVYATIELAKIIKTNQPKLFDYLFDLRHKRKLQELIDIVNLTPLVHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +IT NL DP + D +++R+ L K+ D
Sbjct: 234 FGTDCGNTSWIVPVAWHPDNKNAVITVNLALDPTPLIELDTDQLRERLYTKRVDLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
+P+ +HLN+ P V++ K L + R D KN IK I +
Sbjct: 294 PVPVKEVHLNKCP-VLAPAKTLKAEDAARLGIDREQCLKNLALIKQHPEIREKLIEMFSV 352
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+Y N+ N+D LY+ F S D + I+R +P +L+++ ++K+++ L+F
Sbjct: 353 KREYAAND-----NVDAMLYDGFFSTADRSTMDIIRETAPDQLASLEINVDDKRIKPLLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLKKANEHDTKIL 354
YRARNF TLSY+E RWK + F N + N E ES +E+ K+L
Sbjct: 408 RYRARNFPMTLSYEEQVRWKHHCQDFFEMNMPKYMENFEAVAYEHES-----DENKMKVL 462
Query: 355 NALLMY 360
+L Y
Sbjct: 463 QSLYDY 468
>gi|331647660|ref|ZP_08348752.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli M605]
gi|331043384|gb|EGI15522.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli M605]
Length = 491
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|218699399|ref|YP_002407028.1| exonuclease I [Escherichia coli IAI39]
gi|306814865|ref|ZP_07449027.1| exonuclease I [Escherichia coli NC101]
gi|386624659|ref|YP_006144387.1| exonuclease I [Escherichia coli O7:K1 str. CE10]
gi|415841023|ref|ZP_11522245.1| exodeoxyribonuclease I [Escherichia coli RN587/1]
gi|417281098|ref|ZP_12068398.1| exodeoxyribonuclease I [Escherichia coli 3003]
gi|422379855|ref|ZP_16460039.1| exonuclease [Escherichia coli MS 57-2]
gi|432387569|ref|ZP_19630459.1| exodeoxyribonuclease I [Escherichia coli KTE16]
gi|432397850|ref|ZP_19640631.1| exodeoxyribonuclease I [Escherichia coli KTE25]
gi|432407078|ref|ZP_19649787.1| exodeoxyribonuclease I [Escherichia coli KTE28]
gi|432514319|ref|ZP_19751544.1| exodeoxyribonuclease I [Escherichia coli KTE224]
gi|432699447|ref|ZP_19934602.1| exodeoxyribonuclease I [Escherichia coli KTE169]
gi|432723474|ref|ZP_19958394.1| exodeoxyribonuclease I [Escherichia coli KTE17]
gi|432728061|ref|ZP_19962940.1| exodeoxyribonuclease I [Escherichia coli KTE18]
gi|432732755|ref|ZP_19967588.1| exodeoxyribonuclease I [Escherichia coli KTE45]
gi|432741755|ref|ZP_19976474.1| exodeoxyribonuclease I [Escherichia coli KTE23]
gi|432746060|ref|ZP_19980727.1| exodeoxyribonuclease I [Escherichia coli KTE43]
gi|432759839|ref|ZP_19994334.1| exodeoxyribonuclease I [Escherichia coli KTE46]
gi|432894898|ref|ZP_20106719.1| exodeoxyribonuclease I [Escherichia coli KTE165]
gi|432905237|ref|ZP_20114143.1| exodeoxyribonuclease I [Escherichia coli KTE194]
gi|432972220|ref|ZP_20161088.1| exodeoxyribonuclease I [Escherichia coli KTE207]
gi|432991062|ref|ZP_20179726.1| exodeoxyribonuclease I [Escherichia coli KTE217]
gi|433039015|ref|ZP_20226616.1| exodeoxyribonuclease I [Escherichia coli KTE113]
gi|433082975|ref|ZP_20269432.1| exodeoxyribonuclease I [Escherichia coli KTE133]
gi|433111273|ref|ZP_20297138.1| exodeoxyribonuclease I [Escherichia coli KTE150]
gi|433144607|ref|ZP_20329752.1| exodeoxyribonuclease I [Escherichia coli KTE168]
gi|218369385|emb|CAR17142.1| exonuclease I [Escherichia coli IAI39]
gi|305852259|gb|EFM52711.1| exonuclease I [Escherichia coli NC101]
gi|323187688|gb|EFZ72989.1| exodeoxyribonuclease I [Escherichia coli RN587/1]
gi|324008954|gb|EGB78173.1| exonuclease [Escherichia coli MS 57-2]
gi|345432621|dbj|BAK68952.1| exonuclease I [Escherichia coli O157:H45]
gi|349738397|gb|AEQ13103.1| exonuclease I [Escherichia coli O7:K1 str. CE10]
gi|386245427|gb|EII87157.1| exodeoxyribonuclease I [Escherichia coli 3003]
gi|430906962|gb|ELC28467.1| exodeoxyribonuclease I [Escherichia coli KTE16]
gi|430915954|gb|ELC37032.1| exodeoxyribonuclease I [Escherichia coli KTE25]
gi|430929837|gb|ELC50346.1| exodeoxyribonuclease I [Escherichia coli KTE28]
gi|431042020|gb|ELD52513.1| exodeoxyribonuclease I [Escherichia coli KTE224]
gi|431243596|gb|ELF37979.1| exodeoxyribonuclease I [Escherichia coli KTE169]
gi|431266028|gb|ELF57590.1| exodeoxyribonuclease I [Escherichia coli KTE17]
gi|431273750|gb|ELF64824.1| exodeoxyribonuclease I [Escherichia coli KTE18]
gi|431275942|gb|ELF66969.1| exodeoxyribonuclease I [Escherichia coli KTE45]
gi|431283446|gb|ELF74305.1| exodeoxyribonuclease I [Escherichia coli KTE23]
gi|431291405|gb|ELF81913.1| exodeoxyribonuclease I [Escherichia coli KTE43]
gi|431309012|gb|ELF97291.1| exodeoxyribonuclease I [Escherichia coli KTE46]
gi|431422811|gb|ELH05003.1| exodeoxyribonuclease I [Escherichia coli KTE165]
gi|431433537|gb|ELH15209.1| exodeoxyribonuclease I [Escherichia coli KTE194]
gi|431482921|gb|ELH62623.1| exodeoxyribonuclease I [Escherichia coli KTE207]
gi|431495144|gb|ELH74730.1| exodeoxyribonuclease I [Escherichia coli KTE217]
gi|431551713|gb|ELI25685.1| exodeoxyribonuclease I [Escherichia coli KTE113]
gi|431601867|gb|ELI71376.1| exodeoxyribonuclease I [Escherichia coli KTE133]
gi|431628577|gb|ELI96953.1| exodeoxyribonuclease I [Escherichia coli KTE150]
gi|431661955|gb|ELJ28766.1| exodeoxyribonuclease I [Escherichia coli KTE168]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|145636088|ref|ZP_01791758.1| exonuclease I [Haemophilus influenzae PittHH]
gi|145270610|gb|EDK10543.1| exonuclease I [Haemophilus influenzae PittHH]
Length = 440
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 177/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +WKKYR
Sbjct: 409 RARHFYKTLTRAEQIKWKKYR 429
>gi|443618073|ref|YP_007381929.1| exonuclease I [Escherichia coli APEC O78]
gi|443422581|gb|AGC87485.1| exonuclease I [Escherichia coli APEC O78]
Length = 474
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYVDDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|432481343|ref|ZP_19723301.1| exodeoxyribonuclease I [Escherichia coli KTE210]
gi|433092407|ref|ZP_20278678.1| exodeoxyribonuclease I [Escherichia coli KTE138]
gi|431008000|gb|ELD22811.1| exodeoxyribonuclease I [Escherichia coli KTE210]
gi|431610415|gb|ELI79708.1| exodeoxyribonuclease I [Escherichia coli KTE138]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|387612599|ref|YP_006115715.1| exodeoxyribonuclease I [Escherichia coli ETEC H10407]
gi|309702335|emb|CBJ01657.1| exodeoxyribonuclease I [Escherichia coli ETEC H10407]
Length = 475
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ + PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTHQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRGRLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEDIV 475
>gi|427805130|ref|ZP_18972197.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli chi7122]
gi|427809688|ref|ZP_18976753.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli]
gi|412963312|emb|CCK47234.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli chi7122]
gi|412969867|emb|CCJ44508.1| exonuclease I, 3'--> 5' specific; deoxyribophosphodiesterase
[Escherichia coli]
Length = 475
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYVDDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|30248680|ref|NP_840750.1| exonuclease I [Nitrosomonas europaea ATCC 19718]
gi|30180275|emb|CAD84582.1| exodeoxyribonuclease I [Nitrosomonas europaea ATCC 19718]
Length = 496
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 198/371 (53%), Gaps = 9/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWD+I++ + + L P GI WP GKPSF+LE ++ N L
Sbjct: 113 LYRNFYDPYAREWQSGNSRWDVIDLARMTFALRPEGINWPINGEGKPSFRLEDITTANGL 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R PRL++++ LR K+ + P + + M
Sbjct: 173 VHDSAHDALSDVRATIALARLLRAQQPRLYDWLFRLRDKRAAGNLLDMKTHAPVLHTSRM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+SS++ +L+ P+ N N ++ ++L HDP +F+L DI+ + + L K E
Sbjct: 233 YSSEYGCTTLVMPLLPETGNANSVLVYDLRHDPAEFVLLDIDALAERLFTPKEELAEGLQ 292
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ + LN+ P ++ KVL+ + R ++ ++ + +L + ++I
Sbjct: 293 RLPVKAVRLNKCP-ALAPQKVLNDEVANRIGLNVEQCQQHWQL---LLQHPDFMQRIKQA 348
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y N E + D LY+ F S D ++R P KL+++ F++++ EL+F YR
Sbjct: 349 YSGNKVFAENDADLALYDGFASDHDRNLFPLVRDAEPGKLADLAGKFQDERYIELLFRYR 408
Query: 299 ARNFIETLSYKELKRWKKY-RISRFYNKKNNLYNINMFYLEIESLLKKANEHDT-KILNA 356
ARNF +TLS +E W+ + R N N +N ++ ++ L + ILN
Sbjct: 409 ARNFPDTLSVQEEHHWQMHCRRQLGENAINGSLTLNEYHQKLLQLRTDCPQQAQLDILNE 468
Query: 357 LLMYGKSITQK 367
L +G+ + Q+
Sbjct: 469 LEAWGRVLAQE 479
>gi|423103804|ref|ZP_17091506.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5242]
gi|376385446|gb|EHS98167.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5242]
Length = 474
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 196/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLDN---AQLLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|331668711|ref|ZP_08369559.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA271]
gi|450190178|ref|ZP_21890743.1| exonuclease I [Escherichia coli SEPT362]
gi|331063905|gb|EGI35816.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA271]
gi|449320823|gb|EMD10847.1| exonuclease I [Escherichia coli SEPT362]
Length = 474
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISLLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|307312423|ref|ZP_07592057.1| Exodeoxyribonuclease I [Escherichia coli W]
gi|378712573|ref|YP_005277466.1| Exodeoxyribonuclease I [Escherichia coli KO11FL]
gi|386609369|ref|YP_006124855.1| exonuclease I [Escherichia coli W]
gi|386701038|ref|YP_006164875.1| exonuclease I [Escherichia coli KO11FL]
gi|386709849|ref|YP_006173570.1| exonuclease I [Escherichia coli W]
gi|417220744|ref|ZP_12024184.1| exodeoxyribonuclease I [Escherichia coli 96.154]
gi|419950317|ref|ZP_14466533.1| exonuclease I [Escherichia coli CUMT8]
gi|306907594|gb|EFN38097.1| Exodeoxyribonuclease I [Escherichia coli W]
gi|315061286|gb|ADT75613.1| exonuclease I [Escherichia coli W]
gi|323378134|gb|ADX50402.1| Exodeoxyribonuclease I [Escherichia coli KO11FL]
gi|383392565|gb|AFH17523.1| exonuclease I [Escherichia coli KO11FL]
gi|383405541|gb|AFH11784.1| exonuclease I [Escherichia coli W]
gi|386200546|gb|EIH99536.1| exodeoxyribonuclease I [Escherichia coli 96.154]
gi|388417055|gb|EIL76921.1| exonuclease I [Escherichia coli CUMT8]
Length = 475
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISLLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419805844|ref|ZP_14330969.1| exonuclease [Escherichia coli AI27]
gi|384471155|gb|EIE55241.1| exonuclease [Escherichia coli AI27]
Length = 499
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISLLLELDSDTLRERLYTAKTDLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|332278835|ref|ZP_08391248.1| exonuclease I [Shigella sp. D9]
gi|332101187|gb|EGJ04533.1| exonuclease I [Shigella sp. D9]
Length = 491
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVVPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|432711070|ref|ZP_19946131.1| exodeoxyribonuclease I [Escherichia coli KTE6]
gi|431249123|gb|ELF43294.1| exodeoxyribonuclease I [Escherichia coli KTE6]
Length = 474
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVILVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|419809136|ref|ZP_14334022.1| exonuclease I [Escherichia coli O32:H37 str. P4]
gi|385158066|gb|EIF20056.1| exonuclease I [Escherichia coli O32:H37 str. P4]
Length = 474
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MLGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|417618609|ref|ZP_12269023.1| exodeoxyribonuclease I [Escherichia coli G58-1]
gi|422772128|ref|ZP_16825817.1| exonuclease [Escherichia coli E482]
gi|323940907|gb|EGB37095.1| exonuclease [Escherichia coli E482]
gi|345375323|gb|EGX07270.1| exodeoxyribonuclease I [Escherichia coli G58-1]
Length = 474
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLSGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|420346320|ref|ZP_14847740.1| exodeoxyribonuclease I [Shigella boydii 965-58]
gi|391273992|gb|EIQ32808.1| exodeoxyribonuclease I [Shigella boydii 965-58]
Length = 475
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N++ + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLRI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|386618414|ref|YP_006137994.1| Exonuclease I [Escherichia coli NA114]
gi|432422366|ref|ZP_19664912.1| exodeoxyribonuclease I [Escherichia coli KTE178]
gi|432476235|ref|ZP_19718235.1| exodeoxyribonuclease I [Escherichia coli KTE208]
gi|432559268|ref|ZP_19795938.1| exodeoxyribonuclease I [Escherichia coli KTE49]
gi|333968915|gb|AEG35720.1| Exonuclease I [Escherichia coli NA114]
gi|430944479|gb|ELC64575.1| exodeoxyribonuclease I [Escherichia coli KTE178]
gi|431006176|gb|ELD21183.1| exodeoxyribonuclease I [Escherichia coli KTE208]
gi|431091119|gb|ELD96867.1| exodeoxyribonuclease I [Escherichia coli KTE49]
Length = 475
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVILVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|300926502|ref|ZP_07142295.1| exonuclease [Escherichia coli MS 182-1]
gi|300417463|gb|EFK00774.1| exonuclease [Escherichia coli MS 182-1]
Length = 499
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|417662633|ref|ZP_12312214.1| exodeoxyribonuclease 1 [Escherichia coli AA86]
gi|330911851|gb|EGH40361.1| exodeoxyribonuclease 1 [Escherichia coli AA86]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLIALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|424800195|ref|ZP_18225737.1| Exodeoxyribonuclease I [Cronobacter sakazakii 696]
gi|423235916|emb|CCK07607.1| Exodeoxyribonuclease I [Cronobacter sakazakii 696]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 194/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 234 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 352
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 353 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEQEQERWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALYQYAQEI 473
>gi|432719131|ref|ZP_19954100.1| exodeoxyribonuclease I [Escherichia coli KTE9]
gi|431262943|gb|ELF54932.1| exodeoxyribonuclease I [Escherichia coli KTE9]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-- 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDREKMA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|89330232|emb|CAJ84173.1| exodeoxyribonuclease I [Escherichia coli K-12]
Length = 467
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 184/328 (56%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL Y E +RW ++R F
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVF 435
>gi|422755428|ref|ZP_16809252.1| exonuclease [Escherichia coli H263]
gi|323956180|gb|EGB51931.1| exonuclease [Escherichia coli H263]
Length = 474
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAEEIV 474
>gi|417756141|ref|ZP_12404219.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2B]
gi|418997208|ref|ZP_13544805.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1A]
gi|419002509|ref|ZP_13550041.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1B]
gi|419008135|ref|ZP_13555570.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1C]
gi|419018711|ref|ZP_13566021.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1E]
gi|419029399|ref|ZP_13576569.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2C]
gi|419035046|ref|ZP_13582134.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2D]
gi|419040036|ref|ZP_13587070.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2E]
gi|377844747|gb|EHU09781.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1A]
gi|377845103|gb|EHU10128.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1C]
gi|377848579|gb|EHU13562.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1B]
gi|377861572|gb|EHU26390.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC1E]
gi|377874978|gb|EHU39599.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2B]
gi|377878961|gb|EHU43536.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2C]
gi|377880605|gb|EHU45172.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2D]
gi|377892631|gb|EHU57076.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC2E]
Length = 474
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAEEIV 474
>gi|312973748|ref|ZP_07787920.1| exodeoxyribonuclease I [Escherichia coli 1827-70]
gi|417272110|ref|ZP_12059459.1| exodeoxyribonuclease I [Escherichia coli 2.4168]
gi|425115402|ref|ZP_18517207.1| exonuclease [Escherichia coli 8.0566]
gi|425120121|ref|ZP_18521824.1| exodeoxyribonuclease I [Escherichia coli 8.0569]
gi|310332343|gb|EFP99578.1| exodeoxyribonuclease I [Escherichia coli 1827-70]
gi|345432835|dbj|BAK69162.1| exonuclease I [Escherichia coli O157:H43]
gi|386235810|gb|EII67786.1| exodeoxyribonuclease I [Escherichia coli 2.4168]
gi|408568920|gb|EKK44934.1| exonuclease [Escherichia coli 8.0566]
gi|408570373|gb|EKK46352.1| exodeoxyribonuclease I [Escherichia coli 8.0569]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MLGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|89330230|emb|CAJ84172.1| exodeoxyribonuclease I [Escherichia coli K-12]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHD ++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDVMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLVQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|331658092|ref|ZP_08359054.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA206]
gi|331056340|gb|EGI28349.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA206]
Length = 474
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAEEIV 474
>gi|300936684|ref|ZP_07151588.1| exonuclease [Escherichia coli MS 21-1]
gi|300458265|gb|EFK21758.1| exonuclease [Escherichia coli MS 21-1]
Length = 474
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 202/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L + ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTARADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAQEI 473
>gi|336251136|ref|YP_004594846.1| exonuclease I [Enterobacter aerogenes KCTC 2190]
gi|334737192|gb|AEG99567.1| exonuclease I [Enterobacter aerogenes KCTC 2190]
Length = 473
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPQNEDGLPSFRLEHLTVANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ + PRLF+++ S R K+ + I P +P +++
Sbjct: 173 IEHSNAHDAMADVYATIAMAKLVKTHQPRLFDYLYSHRNKRKLATLIDVPQLKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKN--SFKE 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L ++ +
Sbjct: 233 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDMSPLLELDADTLRERLYTPRDELGYLP 292
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI ++HLN+ P V++ L R + +N A + N + +K+
Sbjct: 293 AAPIKLVHLNKCP-VLAQANTLRPQDADRLGINTQRCLEN---AQLLRANPQVREKVVAL 348
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 349 YAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 405
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-- 352
F YRARNF TL E +RW ++R + F + + + E++ + ++ + K
Sbjct: 406 FNYRARNFPGTLDENEQQRWLEHRRNVFTPEF-----LQAYADELQVMYQQYADDSEKQA 460
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 461 LLKALWQYAQEIV 473
>gi|261821314|ref|YP_003259420.1| exonuclease I [Pectobacterium wasabiae WPP163]
gi|261605327|gb|ACX87813.1| Exodeoxyribonuclease I [Pectobacterium wasabiae WPP163]
Length = 475
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 196/370 (52%), Gaps = 13/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQHGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 IAHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKLSALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ D
Sbjct: 233 MFGAARSNTSWIVPLAWHPDNRNAVIMCDLAGDMTPLLELDSQALRERLYTRRDALTADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P V++ L R D N+ S N+ K + L
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNLALLRS--NSDVREKVVEL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D LY+ F D + + I++ +P+ L ++ F + +LE L F Y
Sbjct: 350 FAEAPAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLFFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL +E +RW ++R + F ++ + + E+ L ++ + K+ L
Sbjct: 410 RARNFPGTLDDREQQRWLQHRRAVFTPER-----LQNYLSELSELYQRHEDDKEKMTQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 465 ALYAYAQELV 474
>gi|91072872|gb|ABE07753.1| exodeoxyribonuclease I [Escherichia coli UTI89]
Length = 491
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSR 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 367 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 426
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 427 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 481
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 482 ALWQYAEEIV 491
>gi|307245526|ref|ZP_07527613.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307254482|ref|ZP_07536318.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307258940|ref|ZP_07540671.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306853585|gb|EFM85803.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306862532|gb|EFM94490.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866964|gb|EFM98821.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 514
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D ++ILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMSILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|385871550|gb|AFI90070.1| Exodeoxyribonuclease I [Pectobacterium sp. SCC3193]
Length = 475
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 196/370 (52%), Gaps = 13/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++ ++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 113 IFYRNFYDPYAYSWQHGNSRWDLLDALRACYALRPEGIVWPENDDGLPSFRLEHLTKANG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV AT+ +A+L + P+LF ++ LR K + A I P +P +++
Sbjct: 173 IAHEQAHDAMSDVYATIAMAKLFKQAQPKLFEYLFPLRNKNKLSALIDIPQMKPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S S + P+ HP N+N +I +L D L D +R+ L ++++ D
Sbjct: 233 MFGAARSNTSWIVPLAWHPDNRNAVIMCDLAGDMTPLLELDSQALRERLYTRQDALTADQ 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P V++ L R D N+ S N+ K + L
Sbjct: 293 SAVPLKLVHINKCP-VLAPANTLRPEDAERLGIDRQRCLDNLALLRS--NSDVREKVVEL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D LY+ F D + + I++ +P+ L ++ F + +LE L F Y
Sbjct: 350 FAEAPAFAASDDVDLRLYDGFFGDADRMAMKIIQETAPQNLPALDLTFADNRLEPLFFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL +E +RW ++R + F ++ + + E+ L ++ + K+ L
Sbjct: 410 RARNFPGTLDDREQQRWLQHRRAVFTPER-----LQNYLSELSELYQRHEDDKEKMTQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 465 ALYAYAQELV 474
>gi|331683697|ref|ZP_08384293.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H299]
gi|419284564|ref|ZP_13826742.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10F]
gi|450218018|ref|ZP_21895734.1| exonuclease I [Escherichia coli O08]
gi|331078649|gb|EGI49851.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli H299]
gi|378133306|gb|EHW94652.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC10F]
gi|449318051|gb|EMD08127.1| exonuclease I [Escherichia coli O08]
Length = 474
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|332288227|ref|YP_004419079.1| exonuclease I [Gallibacterium anatis UMN179]
gi|330431123|gb|AEC16182.1| exonuclease I [Gallibacterium anatis UMN179]
Length = 471
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 179/320 (55%), Gaps = 8/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY + SRWDL++VI+A Y L P GI W Y + G PSF+LE L+ NN+
Sbjct: 111 FYRNFIDPYAYSYSQGNSRWDLLDVIRATYALRPEGINWVYDDEGMPSFRLELLTKANNI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF++ + R KK + I + P +++ M
Sbjct: 171 EHSHAHDAMSDVYATIEMAKLIKQQQPKLFDYFFTHRSKKEIEELIDYVNMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF----K 177
+ S IS M P+ HP NKN +I +L D L + +++ L KK K
Sbjct: 231 LGNYRSNISWMVPLAPHPTNKNAVIFCDLAADIDDLLTLSVEELKQNLYTKKAELELQGK 290
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ +P+ ++H N+ PI ++ K L R D N+ ++ +IFL
Sbjct: 291 KSVPLKLVHCNKCPI-LAPAKTLRPQDAERVGIDRQQCLTNLAKLQAMPEIREKVHQIFL 349
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+ D +++ LY F S D LAILR++SP++L+N F++K++ EL+F Y
Sbjct: 350 EEYDNDYD---DVETALYKVFFSYSDKNNLAILRTLSPEQLANHGLTFQDKRIPELLFRY 406
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F +TLS E +W+KY
Sbjct: 407 RARHFYKTLSRAEQIKWQKY 426
>gi|422956618|ref|ZP_16969092.1| exodeoxyribonuclease I [Escherichia coli H494]
gi|371599534|gb|EHN88319.1| exodeoxyribonuclease I [Escherichia coli H494]
Length = 475
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFEYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLNNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|303250424|ref|ZP_07336622.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252223|ref|ZP_07534120.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302650750|gb|EFL80908.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860145|gb|EFM92161.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 514
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 199/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D ++ILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMSILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|432446621|ref|ZP_19688920.1| exodeoxyribonuclease I [Escherichia coli KTE191]
gi|432593277|ref|ZP_19829594.1| exodeoxyribonuclease I [Escherichia coli KTE60]
gi|432680591|ref|ZP_19915968.1| exodeoxyribonuclease I [Escherichia coli KTE143]
gi|433023894|ref|ZP_20211882.1| exodeoxyribonuclease I [Escherichia coli KTE106]
gi|430972894|gb|ELC89862.1| exodeoxyribonuclease I [Escherichia coli KTE191]
gi|431127377|gb|ELE29677.1| exodeoxyribonuclease I [Escherichia coli KTE60]
gi|431221521|gb|ELF18842.1| exodeoxyribonuclease I [Escherichia coli KTE143]
gi|431535587|gb|ELI11926.1| exodeoxyribonuclease I [Escherichia coli KTE106]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L + ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTARADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAQEIV 475
>gi|417843296|ref|ZP_12489372.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21127]
gi|341950057|gb|EGT76652.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21127]
Length = 473
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 180/321 (56%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYNDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 KHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGTMAPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L+ ++++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLVKSVDELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R + N+ + + IF
Sbjct: 292 SSVPLKLVHVNKCPI-LAPAKTLLPETANRLGINRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWQKYR 429
>gi|432602568|ref|ZP_19838812.1| exodeoxyribonuclease I [Escherichia coli KTE66]
gi|431141142|gb|ELE42907.1| exodeoxyribonuclease I [Escherichia coli KTE66]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLIALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLTQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|254284002|ref|ZP_04958970.1| exonuclease I [gamma proteobacterium NOR51-B]
gi|219680205|gb|EED36554.1| exonuclease I [gamma proteobacterium NOR51-B]
Length = 408
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 199/370 (53%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY+RE+ N SRWDLI+V +A Y L P G WP ++NG PSF+LE L+ N +
Sbjct: 42 LYRNFFDPYQREYANGNSRWDLIDVARAIYALRPEGTQWPARDNGLPSFRLEDLTAANGI 101
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ LAR +N P LF +LS+R+K++V + RP +++ M
Sbjct: 102 AHGAAHDALSDVDATIDLARHFQNVQPALFAELLSMRRKRHVETLMDLGSLRPVVHVSSM 161
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ S S ++L+ P+ HP+N+N +I +L P FL + L + E
Sbjct: 162 YGSDRSNLALVVPLVRHPVNRNEIICADLSQ-PPDFLSESATDMAARLFTPASELPEGAV 220
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNI-KCASSILNNTYIWKKIFL 237
PI IH+N+SP+V+ N + + + R D +++ + + N K+
Sbjct: 221 RPPIKTIHINKSPVVL-NTQWVRGEVAERLGLDGEAHRRHLAEIRQANDKNPEGLKQRLQ 279
Query: 238 D-YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
D Y + D LY+ F D + LR+ SP++L++ + FE+ +LEEL+F
Sbjct: 280 DIYSERRFAPRTDPDVMLYDGFFPNSDRSQFDGLRAASPEQLAS-GWVFEDARLEELLFR 338
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT--KIL 354
YRARNF TL +E RW+++ R+++ + + + F E+ + D+ + L
Sbjct: 339 YRARNFPATLDAEESARWQEHCRHRYFD-ADAPFPLTAFREELAQERSAPDLSDSVARAL 397
Query: 355 NALLMYGKSI 364
+AL Y +++
Sbjct: 398 DALEDYVQTL 407
>gi|432862212|ref|ZP_20086897.1| exodeoxyribonuclease I [Escherichia coli KTE146]
gi|431405431|gb|ELG88673.1| exodeoxyribonuclease I [Escherichia coli KTE146]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|237704470|ref|ZP_04534951.1| exodeoxyribonuclease I [Escherichia sp. 3_2_53FAA]
gi|300974061|ref|ZP_07172435.1| exonuclease [Escherichia coli MS 200-1]
gi|300986935|ref|ZP_07177911.1| exonuclease [Escherichia coli MS 45-1]
gi|386629804|ref|YP_006149524.1| exonuclease I [Escherichia coli str. 'clone D i2']
gi|386634724|ref|YP_006154443.1| exonuclease I [Escherichia coli str. 'clone D i14']
gi|422360570|ref|ZP_16441204.1| exonuclease [Escherichia coli MS 110-3]
gi|422361998|ref|ZP_16442579.1| exonuclease [Escherichia coli MS 153-1]
gi|422372862|ref|ZP_16453202.1| exonuclease [Escherichia coli MS 60-1]
gi|26108790|gb|AAN80993.1|AE016762_246 Exodeoxyribonuclease I [Escherichia coli CFT073]
gi|226900836|gb|EEH87095.1| exodeoxyribonuclease I [Escherichia sp. 3_2_53FAA]
gi|300308958|gb|EFJ63478.1| exonuclease [Escherichia coli MS 200-1]
gi|300407821|gb|EFJ91359.1| exonuclease [Escherichia coli MS 45-1]
gi|315285605|gb|EFU45047.1| exonuclease [Escherichia coli MS 110-3]
gi|315295233|gb|EFU54568.1| exonuclease [Escherichia coli MS 153-1]
gi|324015752|gb|EGB84971.1| exonuclease [Escherichia coli MS 60-1]
gi|355420703|gb|AER84900.1| exonuclease I [Escherichia coli str. 'clone D i2']
gi|355425623|gb|AER89819.1| exonuclease I [Escherichia coli str. 'clone D i14']
Length = 491
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 367 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 426
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 427 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 481
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 482 ALWQYAEEIV 491
>gi|331663511|ref|ZP_08364421.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA143]
gi|331059310|gb|EGI31287.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA143]
Length = 474
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATISMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AFPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVT 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|301050038|ref|ZP_07196952.1| exonuclease [Escherichia coli MS 185-1]
gi|300298222|gb|EFJ54607.1| exonuclease [Escherichia coli MS 185-1]
Length = 491
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 367 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 426
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 427 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 481
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 482 ALWQYAEEIV 491
>gi|342904223|ref|ZP_08726024.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21621]
gi|341953463|gb|EGT79967.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21621]
Length = 473
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 178/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANAI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMSPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVSDIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWRKYR 429
>gi|82777457|ref|YP_403806.1| exonuclease I [Shigella dysenteriae Sd197]
gi|81241605|gb|ABB62315.1| exonuclease I [Shigella dysenteriae Sd197]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 199/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYTLRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 463 LLKALWQYAEEI 474
>gi|16273288|ref|NP_439529.1| exonuclease I [Haemophilus influenzae Rd KW20]
gi|1169569|sp|P45188.1|EX1_HAEIN RecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; AltName:
Full=DNA deoxyribophosphodiesterase; Short=dRPase
gi|1574211|gb|AAC23023.1| exodeoxyribonuclease I (sbcB) [Haemophilus influenzae Rd KW20]
Length = 473
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 177/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N++
Sbjct: 112 FYRNFIEPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANSI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D +AILRS+ +KLS FE+K++ EL+F Y
Sbjct: 351 EERQFASN--DNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +WKKYR
Sbjct: 409 RARHFYKTLTRAEQIKWKKYR 429
>gi|284919774|emb|CAX65551.1| putative exonuclease I [Enterobacter hormaechei]
Length = 502
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++ Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 142 IFYRNFYDPYAWSWQNRNSRWDLLDIMRVCYALRPEGINWPENDDGLPSFRLEHLTRANG 201
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 202 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 261
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 262 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELNSDTLRERLYTPKEALGDLP 321
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 322 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 377
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 378 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNY 437
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + N Y + M Y + E N +L
Sbjct: 438 RARNYPGTLDEAEQERWLQHRRNVFTPEFLNSYAQELEMLYGQYE-----GNAEKQALLK 492
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 493 ALFQYAQEIV 502
>gi|110642225|ref|YP_669955.1| exonuclease I [Escherichia coli 536]
gi|161486193|ref|NP_754426.2| exonuclease I [Escherichia coli CFT073]
gi|191170056|ref|ZP_03031610.1| exodeoxyribonuclease I [Escherichia coli F11]
gi|227887062|ref|ZP_04004867.1| exodeoxyribonuclease I [Escherichia coli 83972]
gi|386599890|ref|YP_006101396.1| exodeoxyribonuclease I [Escherichia coli IHE3034]
gi|386639589|ref|YP_006106387.1| C-terminal part of exodeoxyribonuclease I, partial [Escherichia
coli ABU 83972]
gi|422837993|ref|ZP_16885966.1| exodeoxyribonuclease I [Escherichia coli H397]
gi|432412225|ref|ZP_19654888.1| exodeoxyribonuclease I [Escherichia coli KTE39]
gi|432457123|ref|ZP_19699308.1| exodeoxyribonuclease I [Escherichia coli KTE201]
gi|432471384|ref|ZP_19713431.1| exodeoxyribonuclease I [Escherichia coli KTE206]
gi|432496119|ref|ZP_19737915.1| exodeoxyribonuclease I [Escherichia coli KTE214]
gi|432504846|ref|ZP_19746571.1| exodeoxyribonuclease I [Escherichia coli KTE220]
gi|432569096|ref|ZP_19805609.1| exodeoxyribonuclease I [Escherichia coli KTE53]
gi|432588344|ref|ZP_19824700.1| exodeoxyribonuclease I [Escherichia coli KTE58]
gi|432651572|ref|ZP_19887327.1| exodeoxyribonuclease I [Escherichia coli KTE87]
gi|432713796|ref|ZP_19948837.1| exodeoxyribonuclease I [Escherichia coli KTE8]
gi|432754825|ref|ZP_19989375.1| exodeoxyribonuclease I [Escherichia coli KTE22]
gi|432778956|ref|ZP_20013199.1| exodeoxyribonuclease I [Escherichia coli KTE59]
gi|432783965|ref|ZP_20018145.1| exodeoxyribonuclease I [Escherichia coli KTE63]
gi|432787902|ref|ZP_20022034.1| exodeoxyribonuclease I [Escherichia coli KTE65]
gi|432821339|ref|ZP_20055031.1| exodeoxyribonuclease I [Escherichia coli KTE118]
gi|432827484|ref|ZP_20061136.1| exodeoxyribonuclease I [Escherichia coli KTE123]
gi|432974161|ref|ZP_20163000.1| exodeoxyribonuclease I [Escherichia coli KTE209]
gi|432995753|ref|ZP_20184359.1| exodeoxyribonuclease I [Escherichia coli KTE218]
gi|433000322|ref|ZP_20188848.1| exodeoxyribonuclease I [Escherichia coli KTE223]
gi|433008008|ref|ZP_20196425.1| exodeoxyribonuclease I [Escherichia coli KTE229]
gi|433058535|ref|ZP_20245581.1| exodeoxyribonuclease I [Escherichia coli KTE124]
gi|433078190|ref|ZP_20264731.1| exodeoxyribonuclease I [Escherichia coli KTE131]
gi|433087693|ref|ZP_20274065.1| exodeoxyribonuclease I [Escherichia coli KTE137]
gi|433115946|ref|ZP_20301740.1| exodeoxyribonuclease I [Escherichia coli KTE153]
gi|433125597|ref|ZP_20311159.1| exodeoxyribonuclease I [Escherichia coli KTE160]
gi|433139686|ref|ZP_20324942.1| exodeoxyribonuclease I [Escherichia coli KTE167]
gi|433149583|ref|ZP_20334607.1| exodeoxyribonuclease I [Escherichia coli KTE174]
gi|433163842|ref|ZP_20348581.1| exodeoxyribonuclease I [Escherichia coli KTE179]
gi|433168954|ref|ZP_20353582.1| exodeoxyribonuclease I [Escherichia coli KTE180]
gi|442607782|ref|ZP_21022542.1| Exodeoxyribonuclease I [Escherichia coli Nissle 1917]
gi|110343817|gb|ABG70054.1| exodeoxyribonuclease I [Escherichia coli 536]
gi|190909572|gb|EDV69157.1| exodeoxyribonuclease I [Escherichia coli F11]
gi|227835412|gb|EEJ45878.1| exodeoxyribonuclease I [Escherichia coli 83972]
gi|294493683|gb|ADE92439.1| exodeoxyribonuclease I [Escherichia coli IHE3034]
gi|307554081|gb|ADN46856.1| C-terminal part of exodeoxyribonuclease I [Escherichia coli ABU
83972]
gi|371602418|gb|EHN91121.1| exodeoxyribonuclease I [Escherichia coli H397]
gi|430934632|gb|ELC54979.1| exodeoxyribonuclease I [Escherichia coli KTE39]
gi|430982223|gb|ELC98927.1| exodeoxyribonuclease I [Escherichia coli KTE201]
gi|430998602|gb|ELD14843.1| exodeoxyribonuclease I [Escherichia coli KTE206]
gi|431023377|gb|ELD36572.1| exodeoxyribonuclease I [Escherichia coli KTE214]
gi|431038333|gb|ELD49231.1| exodeoxyribonuclease I [Escherichia coli KTE220]
gi|431100131|gb|ELE05143.1| exodeoxyribonuclease I [Escherichia coli KTE53]
gi|431120677|gb|ELE23675.1| exodeoxyribonuclease I [Escherichia coli KTE58]
gi|431190632|gb|ELE90029.1| exodeoxyribonuclease I [Escherichia coli KTE87]
gi|431257599|gb|ELF50523.1| exodeoxyribonuclease I [Escherichia coli KTE8]
gi|431302034|gb|ELF91222.1| exodeoxyribonuclease I [Escherichia coli KTE22]
gi|431327109|gb|ELG14454.1| exodeoxyribonuclease I [Escherichia coli KTE59]
gi|431329170|gb|ELG16470.1| exodeoxyribonuclease I [Escherichia coli KTE63]
gi|431337619|gb|ELG24707.1| exodeoxyribonuclease I [Escherichia coli KTE65]
gi|431368186|gb|ELG54654.1| exodeoxyribonuclease I [Escherichia coli KTE118]
gi|431372733|gb|ELG58395.1| exodeoxyribonuclease I [Escherichia coli KTE123]
gi|431489022|gb|ELH68650.1| exodeoxyribonuclease I [Escherichia coli KTE209]
gi|431506134|gb|ELH84737.1| exodeoxyribonuclease I [Escherichia coli KTE218]
gi|431509337|gb|ELH87607.1| exodeoxyribonuclease I [Escherichia coli KTE223]
gi|431523338|gb|ELI00475.1| exodeoxyribonuclease I [Escherichia coli KTE229]
gi|431568790|gb|ELI41752.1| exodeoxyribonuclease I [Escherichia coli KTE124]
gi|431596821|gb|ELI66763.1| exodeoxyribonuclease I [Escherichia coli KTE131]
gi|431604711|gb|ELI74113.1| exodeoxyribonuclease I [Escherichia coli KTE137]
gi|431634159|gb|ELJ02413.1| exodeoxyribonuclease I [Escherichia coli KTE153]
gi|431645470|gb|ELJ13024.1| exodeoxyribonuclease I [Escherichia coli KTE160]
gi|431659999|gb|ELJ26887.1| exodeoxyribonuclease I [Escherichia coli KTE167]
gi|431670863|gb|ELJ37158.1| exodeoxyribonuclease I [Escherichia coli KTE174]
gi|431687704|gb|ELJ53247.1| exodeoxyribonuclease I [Escherichia coli KTE179]
gi|431687806|gb|ELJ53347.1| exodeoxyribonuclease I [Escherichia coli KTE180]
gi|441710387|emb|CCQ08519.1| Exodeoxyribonuclease I [Escherichia coli Nissle 1917]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|420336564|ref|ZP_14838141.1| exodeoxyribonuclease I [Shigella flexneri K-315]
gi|391262304|gb|EIQ21334.1| exodeoxyribonuclease I [Shigella flexneri K-315]
Length = 474
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMPPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVVETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLIQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|162138417|ref|YP_541284.2| exonuclease I [Escherichia coli UTI89]
gi|386603957|ref|YP_006110257.1| exonuclease I [Escherichia coli UM146]
gi|432574095|ref|ZP_19810576.1| exodeoxyribonuclease I [Escherichia coli KTE55]
gi|307626441|gb|ADN70745.1| exonuclease I [Escherichia coli UM146]
gi|431108163|gb|ELE12320.1| exodeoxyribonuclease I [Escherichia coli KTE55]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|222156778|ref|YP_002556917.1| exodeoxyribonuclease I [Escherichia coli LF82]
gi|387617380|ref|YP_006120402.1| exonuclease I [Escherichia coli O83:H1 str. NRG 857C]
gi|387829955|ref|YP_003349892.1| exonuclease I [Escherichia coli SE15]
gi|416339107|ref|ZP_11675045.1| Exodeoxyribonuclease I [Escherichia coli WV_060327]
gi|417286897|ref|ZP_12074184.1| exodeoxyribonuclease I [Escherichia coli TW07793]
gi|432432306|ref|ZP_19674735.1| exodeoxyribonuclease I [Escherichia coli KTE187]
gi|432500508|ref|ZP_19742265.1| exodeoxyribonuclease I [Escherichia coli KTE216]
gi|432554105|ref|ZP_19790829.1| exodeoxyribonuclease I [Escherichia coli KTE47]
gi|432694877|ref|ZP_19930078.1| exodeoxyribonuclease I [Escherichia coli KTE162]
gi|432844988|ref|ZP_20077821.1| exodeoxyribonuclease I [Escherichia coli KTE141]
gi|432899042|ref|ZP_20109734.1| exodeoxyribonuclease I [Escherichia coli KTE192]
gi|432919466|ref|ZP_20123597.1| exodeoxyribonuclease I [Escherichia coli KTE173]
gi|432927274|ref|ZP_20128814.1| exodeoxyribonuclease I [Escherichia coli KTE175]
gi|432981449|ref|ZP_20170225.1| exodeoxyribonuclease I [Escherichia coli KTE211]
gi|433028998|ref|ZP_20216858.1| exodeoxyribonuclease I [Escherichia coli KTE109]
gi|433096892|ref|ZP_20283077.1| exodeoxyribonuclease I [Escherichia coli KTE139]
gi|433106313|ref|ZP_20292289.1| exodeoxyribonuclease I [Escherichia coli KTE148]
gi|433208193|ref|ZP_20391867.1| exodeoxyribonuclease I [Escherichia coli KTE97]
gi|222033783|emb|CAP76524.1| exodeoxyribonuclease I [Escherichia coli LF82]
gi|281179112|dbj|BAI55442.1| exonuclease I [Escherichia coli SE15]
gi|312946641|gb|ADR27468.1| exonuclease I [Escherichia coli O83:H1 str. NRG 857C]
gi|320193300|gb|EFW67938.1| Exodeoxyribonuclease I [Escherichia coli WV_060327]
gi|345432781|dbj|BAK69109.1| exonuclease I [Escherichia coli O157:H39]
gi|386249230|gb|EII95401.1| exodeoxyribonuclease I [Escherichia coli TW07793]
gi|430952731|gb|ELC71645.1| exodeoxyribonuclease I [Escherichia coli KTE187]
gi|431028085|gb|ELD41129.1| exodeoxyribonuclease I [Escherichia coli KTE216]
gi|431084292|gb|ELD90458.1| exodeoxyribonuclease I [Escherichia coli KTE47]
gi|431233911|gb|ELF29489.1| exodeoxyribonuclease I [Escherichia coli KTE162]
gi|431394410|gb|ELG77943.1| exodeoxyribonuclease I [Escherichia coli KTE141]
gi|431426694|gb|ELH08738.1| exodeoxyribonuclease I [Escherichia coli KTE192]
gi|431444780|gb|ELH25802.1| exodeoxyribonuclease I [Escherichia coli KTE173]
gi|431445501|gb|ELH26428.1| exodeoxyribonuclease I [Escherichia coli KTE175]
gi|431492204|gb|ELH71807.1| exodeoxyribonuclease I [Escherichia coli KTE211]
gi|431543214|gb|ELI18203.1| exodeoxyribonuclease I [Escherichia coli KTE109]
gi|431615627|gb|ELI84752.1| exodeoxyribonuclease I [Escherichia coli KTE139]
gi|431627340|gb|ELI95748.1| exodeoxyribonuclease I [Escherichia coli KTE148]
gi|431729478|gb|ELJ93097.1| exodeoxyribonuclease I [Escherichia coli KTE97]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|331673547|ref|ZP_08374310.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA280]
gi|331068820|gb|EGI40212.1| exodeoxyribonuclease I (Exonuclease I)
(DNAdeoxyribophosphodiesterase) (dRPase) [Escherichia
coli TA280]
Length = 491
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 131 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 190
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 191 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 250
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 251 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 311 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 366
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 367 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 423
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 424 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 478
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 479 LLKALWQYAEEIV 491
>gi|215487234|ref|YP_002329665.1| exonuclease I [Escherichia coli O127:H6 str. E2348/69]
gi|312967244|ref|ZP_07781460.1| exodeoxyribonuclease I [Escherichia coli 2362-75]
gi|419024385|ref|ZP_13571613.1| exodeoxyribonuclease I [Escherichia coli DEC2A]
gi|215265306|emb|CAS09701.1| exonuclease I [Escherichia coli O127:H6 str. E2348/69]
gi|312288052|gb|EFR15956.1| exodeoxyribonuclease I [Escherichia coli 2362-75]
gi|377864005|gb|EHU28804.1| exodeoxyribonuclease I [Escherichia coli DEC2A]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|156933393|ref|YP_001437309.1| exonuclease I [Cronobacter sakazakii ATCC BAA-894]
gi|156531647|gb|ABU76473.1| hypothetical protein ESA_01206 [Cronobacter sakazakii ATCC BAA-894]
Length = 491
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 130 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 189
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 190 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 249
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 250 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 309
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 310 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 368
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 369 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 425
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 426 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 480
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 481 ALYQYAQEI 489
>gi|432436737|ref|ZP_19679125.1| exodeoxyribonuclease I [Escherichia coli KTE188]
gi|432524209|ref|ZP_19761337.1| exodeoxyribonuclease I [Escherichia coli KTE230]
gi|433212922|ref|ZP_20396513.1| exodeoxyribonuclease I [Escherichia coli KTE99]
gi|430962068|gb|ELC79925.1| exodeoxyribonuclease I [Escherichia coli KTE188]
gi|431051325|gb|ELD60988.1| exodeoxyribonuclease I [Escherichia coli KTE230]
gi|431734530|gb|ELJ97929.1| exodeoxyribonuclease I [Escherichia coli KTE99]
Length = 475
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDIPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|421682956|ref|ZP_16122758.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 1485-80]
gi|404339300|gb|EJZ65732.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Shigella flexneri 1485-80]
Length = 474
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|449307677|ref|YP_007440033.1| exonuclease I [Cronobacter sakazakii SP291]
gi|449097710|gb|AGE85744.1| exonuclease I [Cronobacter sakazakii SP291]
Length = 475
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 234 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 352
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 353 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALYQYAQEI 473
>gi|165976088|ref|YP_001651681.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|307256692|ref|ZP_07538471.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|165876189|gb|ABY69237.1| exonuclease I [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|306864740|gb|EFM96644.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 514
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 183/322 (56%), Gaps = 11/322 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGMPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D +AILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMAILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKY 317
YRAR++ ETLS E +W+KY
Sbjct: 407 HYRARHYPETLSRAEQIKWQKY 428
>gi|417789525|ref|ZP_12437168.1| exonuclease I [Cronobacter sakazakii E899]
gi|333956383|gb|EGL74043.1| exonuclease I [Cronobacter sakazakii E899]
Length = 475
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 193/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 234 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 352
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 353 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALYQYAQEI 473
>gi|422971994|ref|ZP_16975046.1| exodeoxyribonuclease I [Escherichia coli TA124]
gi|371598302|gb|EHN87109.1| exodeoxyribonuclease I [Escherichia coli TA124]
Length = 475
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLIALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|152979065|ref|YP_001344694.1| exonuclease I [Actinobacillus succinogenes 130Z]
gi|150840788|gb|ABR74759.1| Exodeoxyribonuclease I [Actinobacillus succinogenes 130Z]
Length = 471
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 191/351 (54%), Gaps = 13/351 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 111 FYRNFIDPYEYSWKNGNSRWDLLDIVRACYALRPEGIEWAYDDDGMPSFRLERLTEANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF + R K+ + I P +++ M
Sbjct: 171 AHENAHDAMSDVYATIAMAKLIKRKQPKLFQYFFENRGKREIEHLINVADMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +L+ P+ HP+N+N +I +L + L I ++R L KK
Sbjct: 231 LGNYRGNCTLVAPVGWHPVNQNAVIVCDLSQNIDDLLTKSIEELRTALYTKKTDLAAQGQ 290
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNI-KCASSILNNTYIWKKIF 236
+P+ ++H+N+ PI+ +L N R D +N+ K S + I +
Sbjct: 291 LPVPLKLVHINKCPILAPANTLLPENAE-RLGIDRQFCSENLQKLRQSFEVRSKIEEIFR 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+++ SD N++ ELY+ F S D LAILR + +KL+ FE+K++ +LIF
Sbjct: 350 EEHRFEPSD---NVEIELYSGFFSNNDKNNLAILRQLPIEKLAEHGLTFEDKRIPDLIFH 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN----LYNINMFYLEIESLL 343
YRAR+F +TL+ E +W+KYR + + + + N+ M Y + E L
Sbjct: 407 YRARHFFKTLTRTEQLQWEKYRRRKLEKEATDFEQRMQNLVMEYGDFEDKL 457
>gi|365837983|ref|ZP_09379339.1| exodeoxyribonuclease I [Hafnia alvei ATCC 51873]
gi|364560783|gb|EHM38703.1| exodeoxyribonuclease I [Hafnia alvei ATCC 51873]
Length = 474
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 196/374 (52%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L P GI WP G PSFKLEHLS N
Sbjct: 112 IFYRNFYDPYAYSWQNGNSRWDLLDVLRTCYALRPEGINWPENEEGLPSFKLEHLSKANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ LA+L++ P+LF+++ LR K V A + +P +I+
Sbjct: 172 IEHENAHDAMADVYATIALAKLVKQAQPKLFDYLFQLRNKHKVSALLDIANMKPLVHISG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SL+ P+ HP NKN +I +L D L D + +R+ L +++ + D
Sbjct: 232 MFGALRGNTSLVAPLAWHPENKNAVIMCDLAGDMSPLLDLDTDALRERLYTRRSELRSDQ 291
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ ++H+N+ P++ + + N R D N++ + ++ + K+
Sbjct: 292 PTAPLKLVHINKCPVLAPDQTLRPENAE-RLGLDRQRCMDNLQL---LRDHPELRDKVVA 347
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD ++D +LY+ F S D + I+R P+ L ++ F +K++ L
Sbjct: 348 VFAEAEPFKASD---DVDAQLYDGFFSDADRSAMQIIRETLPQNLPALDLTFSDKRVLPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF TL+ E +RW+ +R + ++ + + ++E L + E K+
Sbjct: 405 LFRYRARNFPTTLTDDEQRRWQLHRQAVLTPER-----VQAYIHQLEELYNRHEEEPEKL 459
Query: 354 --LNALLMYGKSIT 365
L L Y + +
Sbjct: 460 AQLKELFEYARQLV 473
>gi|423115140|ref|ZP_17102831.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5245]
gi|376382825|gb|EHS95556.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5245]
Length = 474
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 179/328 (54%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++ Y L P GI WP + G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRTCYALRPEGINWPENDEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLDLDADVLRERLYTPKSELGDLA 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ +N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLEN---AQRLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 YAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARN+ TL E +RW ++R F
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVF 434
>gi|317048759|ref|YP_004116407.1| exodeoxyribonuclease I [Pantoea sp. At-9b]
gi|316950376|gb|ADU69851.1| Exodeoxyribonuclease I [Pantoea sp. At-9b]
Length = 473
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 180/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 112 IFYRNFFDPYGWSWQNGNSRWDLLDVMRACYALRPEGIVWPENDDGFPSFKLEHLTKANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV ATL +A+L++ P+LF F+ S R K+ ++ I P +P +++
Sbjct: 172 VAHEQAHDAMSDVYATLAMAKLVKEKQPKLFEFLFSHRNKQKLMTLIDIPQMKPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N LI +L D L +++R+ L + + +
Sbjct: 232 MFGAARGNTSWVVPLAWHPDNRNALIVADLAGDMSPLLTLSPDELRERLYTRHSELGDQA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNI---KCASSILNNTYIWKKI 235
+PI ++H+N+ P V++ L R D N+ + + + N +
Sbjct: 292 AVPIKLVHINKCP-VLAPANTLRPEDAERLNIDRQHCLANLALLRQHAEVRENVVT---L 347
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD ++D +LYN F S D + I+R + L ++ F++K++ L+
Sbjct: 348 FAEAEPFTPSD---DVDAQLYNGFFSDADRAAMNIVRQTPAQNLPALDLTFDDKRIARLL 404
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 405 FRYRARNFPGTLDDAEQQRWLQHR 428
>gi|422799288|ref|ZP_16847787.1| exonuclease [Escherichia coli M863]
gi|323968146|gb|EGB63555.1| exonuclease [Escherichia coli M863]
Length = 474
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|170717586|ref|YP_001784670.1| exonuclease I [Haemophilus somnus 2336]
gi|168825715|gb|ACA31086.1| Exodeoxyribonuclease I [Haemophilus somnus 2336]
Length = 476
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 183/324 (56%), Gaps = 13/324 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDLI+V++A Y L P GI W Y ++G PSF+LE L+ VN +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLIDVVRACYALRPDGINWAYDDDGMPSFRLEKLTQVNGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF F R K+ V I +P +++ M
Sbjct: 172 EHGNAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKREVEKLIDIANMKPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ S + P+ HP+N+N +I +L D L ++R L K ++
Sbjct: 232 LGNYRGNTSWVVPLAWHPINQNAVIVCDLAKDIDDLLAKSAVELRQNLYTPKVELEQHNI 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC--ASSILNNTYIWKKI 235
+P+ ++H+N+ PI+ +L N + D +N++ S + + I +I
Sbjct: 292 LPVPLKLVHINKCPILAPAKTLLPENAT-KLGIDREFCLQNLQKLRQSPDIRDKVI--EI 348
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + + +SD N++ ELYN F S D + ILR +SP+KL+ N F +K++ +L+
Sbjct: 349 FHDEREVIHSD---NVETELYNQFFSNNDKNNMTILRQLSPEKLNEHNLSFSDKRIPDLL 405
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRAR+F +TL E +W+KYR
Sbjct: 406 FHYRARHFYKTLDRSEQIKWQKYR 429
>gi|82543387|ref|YP_407334.1| exonuclease I [Shigella boydii Sb227]
gi|416297048|ref|ZP_11651553.1| Exodeoxyribonuclease I [Shigella flexneri CDC 796-83]
gi|417681157|ref|ZP_12330535.1| exodeoxyribonuclease I [Shigella boydii 3594-74]
gi|420353388|ref|ZP_14854505.1| exodeoxyribonuclease I [Shigella boydii 4444-74]
gi|81244798|gb|ABB65506.1| deoxyribophosphodiesterase [Shigella boydii Sb227]
gi|320185776|gb|EFW60530.1| Exodeoxyribonuclease I [Shigella flexneri CDC 796-83]
gi|332097090|gb|EGJ02073.1| exodeoxyribonuclease I [Shigella boydii 3594-74]
gi|391278877|gb|EIQ37573.1| exodeoxyribonuclease I [Shigella boydii 4444-74]
Length = 474
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMPPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|238784349|ref|ZP_04628360.1| Exodeoxyribonuclease I [Yersinia bercovieri ATCC 43970]
gi|238714777|gb|EEQ06778.1| Exodeoxyribonuclease I [Yersinia bercovieri ATCC 43970]
Length = 476
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 193/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIIWPENEDGLPSFKLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVHATIAMAKLVKQVQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDRLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPENAE-RLGIDRQHCLRNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ P+ L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEPQNLPALDLTFQDPRLEPLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+Y E KRW ++R N + + L++E + + K +L
Sbjct: 410 FRARNYPNTLTYSEQKRWLEHRREAL-----NPELVQDYVLQLEQFYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFDYAKGLV 475
>gi|416897941|ref|ZP_11927589.1| exodeoxyribonuclease I [Escherichia coli STEC_7v]
gi|417114956|ref|ZP_11966092.1| exodeoxyribonuclease I [Escherichia coli 1.2741]
gi|327253143|gb|EGE64797.1| exodeoxyribonuclease I [Escherichia coli STEC_7v]
gi|386140375|gb|EIG81527.1| exodeoxyribonuclease I [Escherichia coli 1.2741]
Length = 475
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKMRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|429116125|ref|ZP_19177043.1| Exodeoxyribonuclease I [Cronobacter sakazakii 701]
gi|426319254|emb|CCK03156.1| Exodeoxyribonuclease I [Cronobacter sakazakii 701]
Length = 383
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 193/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 22 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 81
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 82 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 141
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 142 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 201
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K +F D
Sbjct: 202 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 260
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 261 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 317
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 318 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 372
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 373 ALYQYAQEIV 382
>gi|292488688|ref|YP_003531575.1| exodeoxyribonuclease I [Erwinia amylovora CFBP1430]
gi|292899843|ref|YP_003539212.1| exodeoxyribonuclease I [Erwinia amylovora ATCC 49946]
gi|428785631|ref|ZP_19003122.1| exodeoxyribonuclease I [Erwinia amylovora ACW56400]
gi|291199691|emb|CBJ46811.1| exodeoxyribonuclease I [Erwinia amylovora ATCC 49946]
gi|291554122|emb|CBA21287.1| exodeoxyribonuclease I [Erwinia amylovora CFBP1430]
gi|426277193|gb|EKV54920.1| exodeoxyribonuclease I [Erwinia amylovora ACW56400]
Length = 475
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++V++A Y L P GITWP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAWSWQHGNSRWDLLDVMRACYALRPDGITWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PRL++F+ S R K+ + I P +P +I+
Sbjct: 174 VAHENAHDAMSDVYATIAMAKLVKEKQPRLYDFLFSHRNKQKITTLIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + S + P+ HP N+N LIT +L D L D + +R L +++
Sbjct: 234 MFGAARGNASWIAPLAWHPDNRNALITCDLDADMAPLLELDADALRARLYTRRDELNGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R D N+ + + + +K+
Sbjct: 294 PVPLKLVHINKCP-VVAPANTLRPEDAERIGIDRQRCRDNLAL---LRQHPEVREKVVTL 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD ++D ++YN F S D + I+R + + L ++ F + ++E+L+
Sbjct: 350 FAEAPPFTPSD---DVDSQIYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F +RARNF TL KE +RW ++R F ++ + + E+E L + ++ +
Sbjct: 407 FRFRARNFPGTLDDKEQQRWLQHRRQMFSPER-----VQGYVQELEMLFNQYEGDQARQE 461
Query: 353 ILNALLMYGKSIT 365
L AL Y + +
Sbjct: 462 QLKALFAYMQELV 474
>gi|421728866|ref|ZP_16168017.1| exonuclease I [Klebsiella oxytoca M5al]
gi|410370459|gb|EKP25189.1| exonuclease I [Klebsiella oxytoca M5al]
Length = 474
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 196/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLDN---AQLLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|420325945|ref|ZP_14827701.1| exodeoxyribonuclease I [Shigella flexneri CCH060]
gi|391251687|gb|EIQ10897.1| exodeoxyribonuclease I [Shigella flexneri CCH060]
Length = 474
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 200/372 (53%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMPPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWSGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ +D N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPTD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L+++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|402844795|ref|ZP_10893145.1| exodeoxyribonuclease I [Klebsiella sp. OBRC7]
gi|402273227|gb|EJU22434.1| exodeoxyribonuclease I [Klebsiella sp. OBRC7]
Length = 474
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 196/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLDN---AQLLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|344339416|ref|ZP_08770345.1| Exodeoxyribonuclease I [Thiocapsa marina 5811]
gi|343800720|gb|EGV18665.1| Exodeoxyribonuclease I [Thiocapsa marina 5811]
Length = 484
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 184/338 (54%), Gaps = 21/338 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RNL++PY REW+N SRWDLI+ ++ + L P G+ WP + +G SFKLEHL+ N
Sbjct: 114 LLYRNLLDPYAREWRNGNSRWDLIDALRLAHALRPGGLEWPTREDGTTSFKLEHLTAANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYV--LAEIGWPIARPFFYI 118
+ H +AHDAL+DVRAT+ LAR +R+ P+LF++ L+LR K+ V L + G P+ +
Sbjct: 174 IDHGQAHDALADVRATIALARRLRHAQPKLFDYALTLRDKRRVRELLDRGVPL----LHA 229
Query: 119 THMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
+ + + I+ + P+C HP+N N +I +L P+ + +++R L S E
Sbjct: 230 SARYPAAQGCIAPVLPLCAHPLNGNGVICVDLRAPPELLIDLSADELRTRLFSPAKSLPE 289
Query: 179 D---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK----CASSILNNTYI 231
IP+ IH+NR+P V++ +K L + R+ D + + CA++ I
Sbjct: 290 GVERIPLKTIHVNRAP-VLAPMKTLEPDAAARWSIDPGAVAAHARRLRECAAA------I 342
Query: 232 WKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
K+ + + E + D +Y F S D + + + P +L + F++ +L
Sbjct: 343 EMKVREVHSAPDGPTETDPDLMIYSGGFFSDADRRAMDGIHRLDPAELGDHAPSFQDPRL 402
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
E++ YRARN+ ETL+ +E + W +R++R +
Sbjct: 403 GEMLLRYRARNWPETLTPEEREDWDLFRLARLTDPAAG 440
>gi|300903879|ref|ZP_07121780.1| exonuclease [Escherichia coli MS 84-1]
gi|301307139|ref|ZP_07213168.1| exonuclease [Escherichia coli MS 124-1]
gi|415866496|ref|ZP_11539005.1| exonuclease [Escherichia coli MS 85-1]
gi|300404137|gb|EFJ87675.1| exonuclease [Escherichia coli MS 84-1]
gi|300837654|gb|EFK65414.1| exonuclease [Escherichia coli MS 124-1]
gi|315253362|gb|EFU33330.1| exonuclease [Escherichia coli MS 85-1]
Length = 499
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 200/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 139 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 198
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 199 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 258
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 259 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 318
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +++
Sbjct: 319 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREEVVAI 374
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 375 FAEAEPFTPSD---NVDAQLYSGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 431
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 432 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 486
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 487 LLKALWQYAEEIV 499
>gi|345879060|ref|ZP_08830741.1| 50S ribosomal protein L10 [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344223913|gb|EGV50335.1| 50S ribosomal protein L10 [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 486
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 185/332 (55%), Gaps = 9/332 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ + L P GI WP G+PSF+LE L+ N +
Sbjct: 116 LYRNLFDPYAREWQNGNSRWDIIDMVRLTHALRPEGIEWPSDAAGRPSFRLELLTAANGI 175
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARP-FFYITH 120
+H+ AHDALSDV AT+ LARLI+ PRL+ ++LS R K + + P +++
Sbjct: 176 AHQAAHDALSDVYATIALARLIKQRQPRLYGYLLSHRNKHQLRDLLNLKATPPILLHVSS 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + I+ + + HP N N +I ++L DP L D +I L E
Sbjct: 236 MYPVELGCIAPVVALAQHPTNSNGVIVFDLRQDPAPLLELDDEQIHQRLFTPTADLPEGV 295
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ +HLN+ P+++ L++ R++ +L A ++ + +L+ + KI
Sbjct: 296 ERIPLKTVHLNKCPVLVPT-NTLTAEAAERWQINLEQAERHRQ---QLLSAPELQAKISR 351
Query: 238 DYKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+++ + + + D LY+ F S+ D ++ +R +L+ ++F F++ +L E++F
Sbjct: 352 VHQMKQFEPQTDPDLSLYSGPFFSEDDRRRMQQIRETPVDQLAGLHFAFDDARLPEMLFR 411
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
YRARN+ ETL+ E +RW +YR +R ++
Sbjct: 412 YRARNWPETLNETERQRWDEYRQTRLFDADGG 443
>gi|398998869|ref|ZP_10701625.1| exonuclease I, partial [Pseudomonas sp. GM18]
gi|398132926|gb|EJM22176.1| exonuclease I, partial [Pseudomonas sp. GM18]
Length = 356
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 175/306 (57%), Gaps = 10/306 (3%)
Query: 14 WKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDV 73
W+ SRWDLI++++A Y L P G WP + G+ + KLE L+ N + H AH+ALSDV
Sbjct: 1 WQGGNSRWDLIDIVRAAYALRPDGFVWPTDDEGRVTLKLERLTAANGIDHGNAHEALSDV 60
Query: 74 RATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMW 133
RAT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+ FS+ Y+ ++
Sbjct: 61 RATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGRFSAARHYVGVVL 118
Query: 134 PICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRS 190
P+ HP N+N LI +L DP+ L D +R L +++ E +P+ +IH+N+
Sbjct: 119 PLAWHPRNRNALIVCDLHLDPQGLLDLDTEALRQRLYTRRDDLAEGELPVPLKLIHINKC 178
Query: 191 PIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELN 249
P V++ L VL R D+ + A + +W+ K+ Y + L+
Sbjct: 179 P-VVAPLSVLRPEDQQRLGLDMALYQER---ALRLSAAQQLWQDKVSGIYAREDFAASLD 234
Query: 250 IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYK 309
+++LY+ FI +D +R+ P +L+ + F++++L EL+F YRARNF +TLS +
Sbjct: 235 PEQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFRYRARNFPDTLSLE 294
Query: 310 ELKRWK 315
E +RW+
Sbjct: 295 EQERWR 300
>gi|401764359|ref|YP_006579366.1| exonuclease I [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400175893|gb|AFP70742.1| exonuclease I [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 474
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 192/370 (51%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP G SF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEEGLTSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKAAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L KN +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNK--KNNLYNINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + N + M Y + E N +L
Sbjct: 410 RARNYPGTLDETEQERWLQHRRNVFTPEYLHNYAQELEMLYGQYE-----GNAEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALFQYAQEIV 474
>gi|417844252|ref|ZP_12490299.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21639]
gi|341956934|gb|EGT83347.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M21639]
Length = 473
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 179/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMAPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L + L +++R L KK+ +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGNIDNLLAKSADELRTDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWQKYR 429
>gi|416033494|ref|ZP_11573064.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347999055|gb|EGY39934.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
Length = 420
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 59 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 118
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 119 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 178
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 179 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 238
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D KN + + IF
Sbjct: 239 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMDIF- 296
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 297 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 355
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 356 RARHFYRTLNRAEQIKWQKY 375
>gi|429732538|ref|ZP_19267147.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans Y4]
gi|429155877|gb|EKX98523.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans Y4]
Length = 475
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 234 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D KN + + IF
Sbjct: 294 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMDIF- 351
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 352 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 410
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 411 RARHFYRTLNRAEQIKWQKY 430
>gi|433329614|ref|ZP_20404308.1| exonuclease I, partial [Escherichia coli J96]
gi|432344307|gb|ELL38970.1| exonuclease I, partial [Escherichia coli J96]
Length = 427
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 181/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 103 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 162
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 163 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 222
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 223 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 282
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 283 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 338
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 339 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 395
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL Y E +RW ++R
Sbjct: 396 FNYRARNFPGTLDYAEQQRWLEHR 419
>gi|429087206|ref|ZP_19149938.1| Exodeoxyribonuclease I [Cronobacter universalis NCTC 9529]
gi|426507009|emb|CCK15050.1| Exodeoxyribonuclease I [Cronobacter universalis NCTC 9529]
Length = 410
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 198/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 49 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 108
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + + +P +++
Sbjct: 109 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLVDIVQMKPLVHVSG 168
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 169 MFGAWRGNTSWIAPVAWHPENRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 228
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R D N+K + ++ + +K+
Sbjct: 229 AVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKV---LRDSPQVREKLVTL 284
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ S N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 285 FAEAPSFPPTDNVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 344
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 345 RARNFPGTLSEQEQERWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 399
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 400 ALYQYAQEMV 409
>gi|432466131|ref|ZP_19708220.1| exodeoxyribonuclease I [Escherichia coli KTE205]
gi|433073230|ref|ZP_20259885.1| exodeoxyribonuclease I [Escherichia coli KTE129]
gi|433120618|ref|ZP_20306293.1| exodeoxyribonuclease I [Escherichia coli KTE157]
gi|433183680|ref|ZP_20367935.1| exodeoxyribonuclease I [Escherichia coli KTE85]
gi|430993715|gb|ELD10059.1| exodeoxyribonuclease I [Escherichia coli KTE205]
gi|431587941|gb|ELI59289.1| exodeoxyribonuclease I [Escherichia coli KTE129]
gi|431643176|gb|ELJ10879.1| exodeoxyribonuclease I [Escherichia coli KTE157]
gi|431706862|gb|ELJ71426.1| exodeoxyribonuclease I [Escherichia coli KTE85]
Length = 475
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTTWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|146312271|ref|YP_001177345.1| exonuclease I [Enterobacter sp. 638]
gi|145319147|gb|ABP61294.1| Exodeoxyribonuclease I subunit C [Enterobacter sp. 638]
Length = 476
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 116 VLYRNFYDPYAWSWQNRNSRWDLLDVMRACYALRPEGINWPENEDGLPSFRLEHLTRANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+ ++ P+LF ++LS R K+ ++ I P +P +I+
Sbjct: 176 IEHSNAHDAMADVYATIEMAKRVKTAQPKLFEYLLSHRNKQKLMTLIDVPQMKPLVHISG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R L K+ ED
Sbjct: 236 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDITPLLELDSDALRARLYTPKSELGEDA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDAERLGINRQQCLDNLKV---LRDNPQVRDKVVAI 351
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFVPSD---NVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLM 408
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTK 352
F YRARN+ TL E +RW ++R + F + Y + M + + E +K N
Sbjct: 409 FNYRARNYPGTLDESEQERWLQHRRNVFTPEYLQCYAQELEMLFTQYEGDAEKQN----- 463
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 464 LLKALYQYAQEI 475
>gi|238749982|ref|ZP_04611486.1| Exodeoxyribonuclease I [Yersinia rohdei ATCC 43380]
gi|238711911|gb|EEQ04125.1| Exodeoxyribonuclease I [Yersinia rohdei ATCC 43380]
Length = 476
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 196/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPAGIVWPENEDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIANMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK---NSFK 177
MF + S + P+ HP NKN +I +L D L D + +R+ L ++ N+ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPDNKNAVIMCDLAGDMSPLLELDSDALRERLYTRRDKLNAQE 293
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L+ N R D +N++ + N I +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLAENAE-RLGIDRQRCLENLQL---LRQNPQIREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ P+ L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEPQNLPALDLTFQDPRLEPLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW ++R N + + L++E + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRREAL-----NPERVQDYVLQLEQFYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFEYARGLV 475
>gi|365971229|ref|YP_004952790.1| exodeoxyribonuclease I [Enterobacter cloacae EcWSU1]
gi|365750142|gb|AEW74369.1| Exodeoxyribonuclease I [Enterobacter cloacae EcWSU1]
Length = 478
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 194/372 (52%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP + G PSF+LEHL+ N
Sbjct: 118 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENDEGLPSFRLEHLTRANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++LS R K+ + I P +P +I+
Sbjct: 178 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFDYLLSHRSKQKLTTLIDVPQMKPLVHISG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 238 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDITPLLDLDSDTLRERLYTPKDELGDLP 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L + R + N+K + N + +K+
Sbjct: 298 AVPVKLVHINKCP-VLAQANTLRAEDADRLGINRQRCLDNLKV---LRENPQVREKVVAI 353
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F + ++E+L+
Sbjct: 354 FAEAEPFVPSD---NVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADARIEKLM 410
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNK--KNNLYNINMFYLEIESLLKKANEHDTK 352
F YRARN+ TL E RW ++R F + ++ + M Y + E N
Sbjct: 411 FNYRARNYPGTLDETEQARWLQHRRHVFTPEFLQSYAQELEMLYSQYE-----GNAEKQA 465
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 466 LLKALYQYAQEI 477
>gi|419013877|ref|ZP_13561231.1| exodeoxyribonuclease I [Escherichia coli DEC1D]
gi|377858185|gb|EHU23029.1| exodeoxyribonuclease I [Escherichia coli DEC1D]
Length = 475
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMNPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|387119898|ref|YP_006285781.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|385874390|gb|AFI85949.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 474
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D KN + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMDIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYRTLNRAEQIKWQKY 429
>gi|417841602|ref|ZP_12487705.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M19501]
gi|341948823|gb|EGT75438.1| Exodeoxyribonuclease I [Haemophilus haemolyticus M19501]
Length = 473
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 177/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDINNLLAKSADELRADLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWQKYR 429
>gi|388258690|ref|ZP_10135865.1| exonuclease I [Cellvibrio sp. BR]
gi|387937449|gb|EIK44005.1| exonuclease I [Cellvibrio sp. BR]
Length = 487
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 205/377 (54%), Gaps = 21/377 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++ L P GI WP +G+P FKLE LS NNL
Sbjct: 114 LYRNFYDPYEREWRNGNSRWDIIDMVRMTRALRPEGIEWPNYEDGRPCFKLEMLSQANNL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDV AT+ +A+LI+ P+L+++ LR K++ + I A+P +I+
Sbjct: 174 KHEAAHDALSDVYATIAVAKLIKTRQPKLYDYAYRLRDKRFAASMIDIDAAKPLLHISSR 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
F ++ +L+ P+ +HP NKN +I +NL DP+ L + +++ L + E +
Sbjct: 234 FPGENGNAALIVPLAMHPTNKNSVIAYNLSADPQALLSLPVEELQLRLYTRTEDLPEGVE 293
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCAS--SILNN------TY 230
+ +H+N++P+++ +L R D +C + +L N
Sbjct: 294 RLALKEVHMNKTPMLLP-AAMLDDATAQRLHIDKQ------RCEAHWQVLRNLTLSERES 346
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
+ ++++ Y N+ + + ++ LY+ F D + +R+ P+ L+N F F + +L
Sbjct: 347 LLQRLYQLYSSNSFAEKTDPEQLLYSGFFDDHDKRLMTRVRNADPETLANTAFPFNDPRL 406
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYN-KKNNLYNINMFYLEIESLLKKANEH 349
E++F YRARNF +LS +EL+RW+++ R + + + + F L I++L + +
Sbjct: 407 GEILFRYRARNFPASLSAEELQRWQEFCRWRLTSPEAQSSLTLMEFDLRIKTLSEAESTS 466
Query: 350 DTK--ILNALLMYGKSI 364
+ +L L YGK +
Sbjct: 467 AEQRLLLQQLAAYGKQL 483
>gi|373467234|ref|ZP_09558534.1| exodeoxyribonuclease I [Haemophilus sp. oral taxon 851 str. F0397]
gi|371759032|gb|EHO47783.1| exodeoxyribonuclease I [Haemophilus sp. oral taxon 851 str. F0397]
Length = 473
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 178/321 (55%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANAI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMSPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N LI +L D L +++R L KK +E
Sbjct: 232 LGNYRGNCTWVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K L R D N+ + + IF
Sbjct: 292 SSVPLKLVHINKCPI-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIRAKVADIFN 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + S+ N++ ELYN F S D ++ILRS+ +KL+ FE+K++ EL+F Y
Sbjct: 351 EERQFESN--DNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKRIPELLFHY 408
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR+F +TL+ E +W+KYR
Sbjct: 409 RARHFYKTLTRAEQIKWQKYR 429
>gi|296103672|ref|YP_003613818.1| exonuclease I [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295058131|gb|ADF62869.1| exonuclease I [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 474
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 196/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGINWPENEDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K++ +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKDALGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E + W ++R + F + + Y + M Y + E NE +L
Sbjct: 410 RARNYPGTLDEAEQECWLQHRRNVFTPEYLHGYAQELEMLYGQYE-----GNEEKQALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALFRYVQEIV 474
>gi|418464238|ref|ZP_13035178.1| exonuclease I [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757034|gb|EHK91190.1| exonuclease I [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 474
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 VHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L + L ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLAAGT 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N D +N + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAEC-LGIDQELCARNRQRLQEARDIRQKVMDIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D+ N++ ELYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDVSDNVETELYNGFFSDADKNNMAILRSLEPEKLAEHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYHTLNRAEQIKWQKY 429
>gi|170726402|ref|YP_001760428.1| exonuclease I [Shewanella woodyi ATCC 51908]
gi|169811749|gb|ACA86333.1| Exodeoxyribonuclease I [Shewanella woodyi ATCC 51908]
Length = 470
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 197/367 (53%), Gaps = 22/367 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWD+I++++A Y P GI WP K +G PSFKLEHL+ N L
Sbjct: 114 FYRNFYDPYAREWQQGNSRWDIIDLVRACYAFRPEGIEWPLKEDGSPSFKLEHLTQANGL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+KAHDA+SDV AT+ +A+LI+ P+LF++ +LRKK+ V I +P +++
Sbjct: 174 SHEKAHDAMSDVYATIDMAKLIKEKQPKLFDYFFNLRKKQEVSKLIDVLNMQPLIHVSSK 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-I 180
SS H S++ P+ H NKN +I NL D + D+ +IR+ + ++ D +
Sbjct: 234 ISSLHGCASIIAPVAHHSSNKNAIICVNLAMDISPLIELDVEQIRERMYTRRADLAPDEL 293
Query: 181 PISM--IHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKKI 235
PIS+ +H+N+ P + S K+L+ R D A +K +K + +
Sbjct: 294 PISVKQVHINKCPFIAST-KILTDENAARLDIDKAFAREQYKRLKQHPELREKLVSVFDV 352
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ N+ DL+L F S D K+ ++R P+ L+ + F++ +L+E++F
Sbjct: 353 EYESDSNDPDLQL-----YSGGFFSSADKAKMEMIRHTLPQNLAALELHFDDSRLKEMLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKI 353
YR RN+ E E +W+++ SR N + ++E+L+ + +E K+
Sbjct: 408 RYRGRNYPEFFDDSESMKWREFCQSRL--------NDPDYMFKLENLVNETSQSEDKQKL 459
Query: 354 LNALLMY 360
L AL Y
Sbjct: 460 LTALCHY 466
>gi|389756378|ref|ZP_10191488.1| exonuclease I [Rhodanobacter sp. 115]
gi|388431626|gb|EIL88684.1| exonuclease I [Rhodanobacter sp. 115]
Length = 481
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 177/328 (53%), Gaps = 14/328 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN PY REW N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N+
Sbjct: 108 LLYRNFYEPYGREWANGNSRWDLIDLVRMCEALRPEGIHWPTREDGSPSFKLEHLATANH 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L ++AHDALSDV A + LARLIR PRL+++ +LR+K+ V + P +I+
Sbjct: 168 LLQERAHDALSDVHALIDLARLIRVRQPRLWDWHFALRRKQRVFELLDVANMTPLVHISS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++++ P+ +HP +I ++L DP + L D ++I D + + E
Sbjct: 228 RYPASRHCLAIIAPLALHPSRPGEIIVYDLATDPAELLALDEDEIADRVFTSRADLPEGI 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL--NCAFKNIKCASSILNNTYIWKKI 235
IP+ + NR+P ++ L L + R + DL N A ++ A++ L + ++I
Sbjct: 288 ERIPLRTVRANRTP-ALAPLSTLKGTDLGRLQLDLERNLAHRDTLHAATGLADKV--RRI 344
Query: 236 FLDYKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
F SDL D E LY F+ D LA +R+ P +L F F + + EL
Sbjct: 345 F----ARASDLPPPEDPELALYAGFLPDGDKRLLAEVRATPPAQLGTRTFPFRDPRYPEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISR 321
+F YRARN+ ETL E +RW +R R
Sbjct: 401 LFRYRARNWPETLDAAERERWGHFRRER 428
>gi|71280482|ref|YP_268744.1| exonuclease I [Colwellia psychrerythraea 34H]
gi|71146222|gb|AAZ26695.1| exodeoxyribonuclease I [Colwellia psychrerythraea 34H]
Length = 487
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 197/358 (55%), Gaps = 13/358 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWP-YKNNGKP--SFKLEHLSF 57
+ +RN +PY REW+N SRWD+I++++A Y L P GI WP K +G+ SF+LE L+
Sbjct: 119 LLYRNFYDPYAREWQNGNSRWDIIDMVRACYALRPEGINWPTVKRDGEEVISFRLELLTA 178
Query: 58 VNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFY 117
N++SH+ AHDA+SDV AT+ +A+LI+ P+L++FI +L+ K V I P +
Sbjct: 179 ANDISHEAAHDAMSDVYATIAMAKLIKEKQPKLYDFIFNLKNKNQVKDLINTAEMTPIVH 238
Query: 118 ITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK 177
+ SS H S P+ HP+NKN +I +L D L +I+ L + +
Sbjct: 239 TSSKVSSAHGCTSWFAPVSYHPVNKNAVICVDLARDISPLLTLSSEEIKARLYTRYDDLA 298
Query: 178 ED---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK 234
D IP+ +IH+N+ P++ +L N R + N+
Sbjct: 299 PDELPIPVKLIHVNKCPVIAPAKTLLPENAE-RLAIPRDVCLDNLALLRKHAELRDKLSD 357
Query: 235 IFLDYKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F +N D ++ ++ LY F S D ++ ILR +SP++L+N F F++++L L
Sbjct: 358 VFATSDFDNDD--VDAEQALYGGSFFSHSDKAQMDILRGLSPEQLANHPFQFQDERLSVL 415
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
+F YRARN+ TLS +E ++W++Y ++ + +++ F ++IE+L A+EH+T
Sbjct: 416 LFRYRARNYPYTLSTEEQQKWQQYCQNKLQYGGKGILSLDEFMMKIENL---AHEHET 470
>gi|415755919|ref|ZP_11480945.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348655923|gb|EGY71346.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
D17P-3]
Length = 474
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D KN + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMNIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYRTLNRAEQIKWQKY 429
>gi|325578381|ref|ZP_08148516.1| exodeoxyribonuclease I [Haemophilus parainfluenzae ATCC 33392]
gi|325160117|gb|EGC72246.1| exodeoxyribonuclease I [Haemophilus parainfluenzae ATCC 33392]
Length = 473
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 176/322 (54%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQFFFEHRGKKEIEKLLDTAEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L D L +R L KK+ +E
Sbjct: 232 LGNYRGNCAWVAPLAWHPTNQNAVIVCDLSGDIDNLLSKSAVDLRQDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D N+ L+ +IF
Sbjct: 292 SSVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRQHCLDNLAKLRQSLDIREKVIEIFS 350
Query: 238 DYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + SD N++ ELYN F S D +AILR + +KL+ FE+K++ EL+F
Sbjct: 351 EEREFEPSD---NVETELYNGFFSSADKNNMAILRDLPAEKLAGHGLAFEDKRIPELLFH 407
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 408 YRARHFYKTLNRAEQIKWQKYR 429
>gi|383317223|ref|YP_005378065.1| exonuclease I [Frateuria aurantia DSM 6220]
gi|379044327|gb|AFC86383.1| exonuclease I [Frateuria aurantia DSM 6220]
Length = 484
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 206/379 (54%), Gaps = 20/379 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY REW++ +RWDLI++++ L P GI WP + +G PSFKLE L+ N
Sbjct: 110 LLYRNFFDPYAREWEHGNARWDLIDLVRMCEALRPDGIQWPSREDGAPSFKLEQLATANA 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIA-RPFFYIT 119
L +AHDALSDVRA +GLA+LIR PRL+++ LR+K+ V + + PIA P +I+
Sbjct: 170 LEQAQAHDALSDVRALIGLAQLIRQRQPRLWDWYYQLRRKQQVQSLLD-PIAMTPLVHIS 228
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED 179
+ + ++++ P+ HP +I ++L HDP +L D I D + + E
Sbjct: 229 SRYPASRHCLAIIVPLAEHPSRPGEMIIYDLDHDPDDWLALDAQSIADRVFVARADLPEG 288
Query: 180 I---PISMIHLNRSPIVISNLKVLSSNLMFRYKF--DLNCA-FKNIKCASSILNNTYIWK 233
I P+ + NR+P ++ + VL + R + D+ A + ++ A +++ +
Sbjct: 289 IERVPLRTLRSNRAP-ALAPMSVLRPVDLERLQLNPDIQLAHLEKLRRAPDLVSKV---R 344
Query: 234 KIFLDYKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLE 291
IF + SD D E LY+ F ++ D L +R+ P+ L+ + F++ +
Sbjct: 345 DIF----GHASDFPPAGDPELALYDGFAARADKPLLVKVRTSPPEALAGLASAFKDPRYP 400
Query: 292 ELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLL-KKANEH 349
EL+F YRARN+ ETLS +E RW+ + R + + ++ ++ I SL ++
Sbjct: 401 ELLFRYRARNWPETLSAEETARWRAFLQDRLSGRSPTVELSLAEYFQRIASLREERTAPA 460
Query: 350 DTKILNALLMYGKSITQKI 368
D +L+ L ++G+S+ + +
Sbjct: 461 DQLLLDQLQVWGESLGEDL 479
>gi|345862818|ref|ZP_08815032.1| exodeoxyribonuclease I [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126160|gb|EGW56026.1| exodeoxyribonuclease I [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 480
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 185/332 (55%), Gaps = 9/332 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY REW+N SRWD+I++++ + L P GI WP G+PSF+LE L+ N +
Sbjct: 110 LYRNLFDPYAREWQNGNSRWDIIDMVRLTHALRPEGIEWPSDAAGRPSFRLELLTAANGI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARP-FFYITH 120
+H+ AHDALSDV AT+ LARLI+ PRL+ ++LS R K + + P +++
Sbjct: 170 AHQAAHDALSDVYATIALARLIKQRQPRLYGYLLSHRNKHQLRDLLNLKATPPILLHVSS 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M+ + I+ + + HP N N +I ++L DP L D +I L E
Sbjct: 230 MYPVELGCIAPVVALAQHPTNSNGVIVFDLRQDPAPLLELDDEQIHQRLFTPTADLPEGV 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ +HLN+ P+++ L++ R++ +L A ++ + +L+ + KI
Sbjct: 290 ERIPLKTVHLNKCPVLVPT-NTLTAEAAERWQINLEQAERHRQ---QLLSALELQAKISR 345
Query: 238 DYKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+++ + + + D LY+ F S+ D ++ +R +L+ ++F F++ +L E++F
Sbjct: 346 VHQMKQFEPQTDPDLSLYSGPFFSEDDRRRMQQIRETPVDQLAGLHFAFDDARLPEMLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
YRARN+ ETL+ E +RW +YR +R ++
Sbjct: 406 YRARNWPETLNETERQRWDEYRQTRLFDADGG 437
>gi|238789860|ref|ZP_04633641.1| Exodeoxyribonuclease I [Yersinia frederiksenii ATCC 33641]
gi|238722056|gb|EEQ13715.1| Exodeoxyribonuclease I [Yersinia frederiksenii ATCC 33641]
Length = 476
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIVNMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK---NSFK 177
MF + S + P+ HP NKN +I +L D L D + +R+ L ++ N+
Sbjct: 234 MFGAARGNTSWVAPLAWHPDNKNAVIMCDLAGDMSPLLSLDSDTLRERLYTRRDKLNAGD 293
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ P++ +L+ N R D +N++ + N I +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLAENAE-RLGIDRQRCLENLQL---LRQNPQIREKVVA 349
Query: 238 DYKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + + ++D +LYN F S D + I+ P+ L ++ F++ +LE L F
Sbjct: 350 LFAQAEAFAVSDDVDAQLYNGFFSDADRATMKIILQTEPQNLPALDLTFQDSRLEPLFFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R + ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRRAALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y +S+
Sbjct: 465 KALFEYARSLV 475
>gi|190149982|ref|YP_001968507.1| exodeoxyribonuclease I [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263310|ref|ZP_07544928.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|189915113|gb|ACE61365.1| exodeoxyribonuclease I [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871372|gb|EFN03098.1| Exonuclease I [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 514
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 198/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI W NG P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWVIDENGVPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ + +LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMADVYATIAMVKLIKQKQPKLFQFFFENRGKKEIEKMIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + + + + PI HP N+N ++ +L D L + ++R L KK E
Sbjct: 232 FGNARANTAWIAPIAWHPTNQNQVLCCDLSGDVSALLTDSAEELRTRLYTKKEELAEGVA 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ +H+NR PI I+ KVL R D +N+K + N + + +K I
Sbjct: 292 PVPLKGVHINRCPI-IAPAKVLLPENAARLGIDRERCLENLKLLKA--NKSLVREKVTEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F++ + + + N++ LY+ F S D ++ILR++ P++L++ F ++++E L+F
Sbjct: 349 FMEER--SFEPSANVETTLYDGFFSPADKNNMSILRTLPPQELAHHGLQFADERVEALLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKI 353
YRAR++ ETLS E +W+KY + K F I+SL + N K+
Sbjct: 407 HYRARHYPETLSRAEQIKWQKYCHQQIDAKSAQ------FAEAIDSLFQIHHDNPEKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y I +
Sbjct: 461 LENLTAYAAQIAE 473
>gi|432372664|ref|ZP_19615709.1| exodeoxyribonuclease I [Escherichia coli KTE11]
gi|430897157|gb|ELC19384.1| exodeoxyribonuclease I [Escherichia coli KTE11]
Length = 475
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDMLRERLYTAKADLGNNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFMPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|366161117|ref|ZP_09460979.1| exonuclease I [Escherichia sp. TW09308]
Length = 474
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 198/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDMLRERLYTAKADLGNNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFMPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 410 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVALLK 464
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 465 ALWQYAEEIV 474
>gi|419340292|ref|ZP_13881765.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12E]
gi|378189624|gb|EHX50215.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC12E]
Length = 474
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 201/372 (54%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVTQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F YRARNF TL Y E +RW ++R F + + + E++ L ++ N+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADNKEKVA 461
Query: 353 ILNALLMYGKSI 364
+L AL Y + I
Sbjct: 462 LLKALWQYAEEI 473
>gi|317491333|ref|ZP_07949769.1| exonuclease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920880|gb|EFV42203.1| exonuclease [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 474
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 196/374 (52%), Gaps = 21/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L P GI WP G PSFKLEHLS N
Sbjct: 112 IFYRNFYDPYAYSWQNGNSRWDLLDVLRTCYALRPEGINWPENEEGLPSFKLEHLSKANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA++DV AT+ LA+L++ P+LF+++ LR K V A + +P +I+
Sbjct: 172 IEHENAHDAMADVYATIALAKLVKQAQPKLFDYLFQLRNKHKVSALLDIANMKPLVHISG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SL+ P+ HP NKN +I +L D L D + +R+ L +++ + D
Sbjct: 232 MFGALRGNTSLVAPLAWHPDNKNAVIMCDLAGDMSPLLELDTDALRERLYTRRSELRSDQ 291
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ ++H+N+ P++ + + N R D N++ + N+ + K+
Sbjct: 292 PPAPLKLVHINKCPVLAPDQTLRPENAE-RLGLDRQRCMDNLQL---LRNHPELRDKVVA 347
Query: 238 DYK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ SD ++D +LY+ F S D + I+R P+ L ++ F +K++ L
Sbjct: 348 VFAEAEPFKASD---DVDAQLYDGFFSDADRSAMQIIRETLPQNLPALDLTFNDKRVLPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRARNF TL+ E +RW+ +R + ++ + + ++E L + + K+
Sbjct: 405 LFRYRARNFPTTLTDDEQRRWQLHRQAVLTPER-----LQAYIHQLEELYNRHEDEPEKL 459
Query: 354 --LNALLMYGKSIT 365
L L Y + +
Sbjct: 460 AQLKELFEYARQLV 473
>gi|89074290|ref|ZP_01160780.1| putative exonuclease I [Photobacterium sp. SKA34]
gi|89049994|gb|EAR55528.1| putative exonuclease I [Photobacterium sp. SKA34]
Length = 473
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 16/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL+++++ Y L P GI WP + +PSFKLE LS N +
Sbjct: 114 LYRNFFDPYGWAWQNGNSRWDLLDIMRTCYALRPEGINWPLDDEDRPSFKLEKLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++I+ N P+LF+++ LR K+ + I P +I+ M
Sbjct: 174 EHANAHDAMADVYATIELAKIIKTNQPKLFDYLFDLRHKRKLQELIDIVNLTPLVHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +IT NL DP + + +++R+ L K+ D
Sbjct: 234 FGTDCGNTSWIVPMAWHPDNKNTVITVNLALDPTPLIELNADQLRNRLYTKRVDLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
+P+ +HLN+ P V++ K L + R D KN IK I +
Sbjct: 294 PVPVKEVHLNKCP-VLAPAKTLKAEDAARLGIDREQCLKNLALIKQHPEIREKLIEMVSV 352
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+Y N+ N+D LY+ F S D + I+R +P +L+++ ++K+++ L+F
Sbjct: 353 KREYAAND-----NVDAMLYDGFFSTADRSTMDIIRETTPDQLASLEINVDDKRIKPLLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARNF TLSY+E RW K+ F+ Y M E + +++E K+L
Sbjct: 408 RYRARNFPMTLSYEEQVRW-KHHCQDFFEMNMTKY---MENFEAVAYEHESDESKMKVLQ 463
Query: 356 ALLMY 360
+L Y
Sbjct: 464 SLYDY 468
>gi|423124655|ref|ZP_17112334.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5250]
gi|376400100|gb|EHT12713.1| exodeoxyribonuclease I [Klebsiella oxytoca 10-5250]
Length = 474
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 195/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYTYRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLDLDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R ++ N A + N + +K+
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLDN---AQLLRANPQVREKVVAI 349
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDAQLYNGFFSDADRAAMKIVLETEPHNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRREVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|429026998|ref|ZP_19093053.1| exodeoxyribonuclease I [Escherichia coli 96.0427]
gi|427280764|gb|EKW45115.1| exodeoxyribonuclease I [Escherichia coli 96.0427]
Length = 475
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ H N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHLENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|152996402|ref|YP_001341237.1| exodeoxyribonuclease I [Marinomonas sp. MWYL1]
gi|150837326|gb|ABR71302.1| Exodeoxyribonuclease I [Marinomonas sp. MWYL1]
Length = 484
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 202/370 (54%), Gaps = 11/370 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+NNCSRWD+I++++ Y + P GI WP +G+ S KLE L+ N +
Sbjct: 114 FYRNFIDPYTREWQNNCSRWDMIDLVRMTYAMRPEGIVWPKNEDGQVSMKLEALTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H++AHDALSDV T+ +A+LIR+ P+LF + +R+K + I +PF +I+ M
Sbjct: 174 AHEQAHDALSDVYGTIEIAKLIRSKQPKLFAYYFKMRQKHELQQFIDVVRLKPFLHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK--ED 179
F +Y + + PI HP NKN +I ++L+ D + + + +IR + ++ E
Sbjct: 234 FGQAKNYAAFVVPIAPHPTNKNGVIIFDLMADAQPLIDLSVEEIRHRVFTRQEELGDLER 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +IH N+SP V + +++ R D + N+ I + + K+ +
Sbjct: 294 LPLKVIHYNKSPAVAPATFLKDVDVVKRLALDGSVCRHNLAI---IKGHAGLAAKLSDVF 350
Query: 240 KINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + + D LY F S++D +++ +RS +LS + F++++L E++ Y
Sbjct: 351 MQEDRPIHKDPDVMLYSGGFFSREDRVRMEKIRSTPANQLSELAMSFDDRRLPEMLMRYI 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM-FYLEIESLLKKANE---HDTKIL 354
RN+ + LS ++ W++YR R K +INM Y E +L+ + + + +L
Sbjct: 411 GRNYPDQLSEQQQFEWEEYRQVRLLEKDGG-GSINMEQYFERLNLIAQTPDLSPAEQVML 469
Query: 355 NALLMYGKSI 364
L Y +SI
Sbjct: 470 QDLADYAQSI 479
>gi|387130341|ref|YP_006293231.1| Exodeoxyribonuclease I [Methylophaga sp. JAM7]
gi|386271630|gb|AFJ02544.1| Exodeoxyribonuclease I [Methylophaga sp. JAM7]
Length = 481
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 196/373 (52%), Gaps = 10/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+N SRWD+I++++ L P GI WP GKPSF+LE L+ N +
Sbjct: 109 LFRNFHDAYAREWQNGNSRWDIIDMVRLTRALRPEGINWPDNEQGKPSFRLEALTAANQI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDAL+DV AT+ +A+ I+ P+L++F+ R+K V + W +P +++ M
Sbjct: 169 EHTGAHDALADVYATIEIAKKIKFAQPKLYHFVFQHRRKHQVAPLLNWQDQKPVIHVSRM 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
+ +++ +++ P+ P NKN +I ++L +DP+ + D + +R+ L + D P
Sbjct: 229 YPAEYCSTAMVVPLAPDPTNKNAIIVYDLRYDPEHVIQLDADTLRERLFTSTHELSADQP 288
Query: 182 ---ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ IHLN+ PIV+ +K L R + DL N++ + N +IF
Sbjct: 289 RPALKTIHLNKCPIVVP-VKTLDDAAAQRLQIDLKVHQANLQKLQATPNLRAKLSQIFTP 347
Query: 239 YKINN-SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ +D E ++ F S +D +A +R +P +L + FE+ +L EL+F Y
Sbjct: 348 PEFAPVTDPEASL---YSGGFFSDRDKQHMATIRQSTPAQLQGLTLPFEDVRLAELLFRY 404
Query: 298 RARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLKKANE-HDTKILN 355
RARN+ +TL+ +E + W YR R ++ + N F I ++ + +IL+
Sbjct: 405 RARNWPDTLTSEEQEVWLTYRQQRLAHHTHPAILNFERFDEAIAVCRQQIDAIEQHQILD 464
Query: 356 ALLMYGKSITQKI 368
AL Y + + Q +
Sbjct: 465 ALADYAEKLRQSL 477
>gi|345430217|ref|YP_004823337.1| exonuclease I [Haemophilus parainfluenzae T3T1]
gi|301156280|emb|CBW15751.1| exonuclease I [Haemophilus parainfluenzae T3T1]
Length = 473
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 178/325 (54%), Gaps = 15/325 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQFFFEHRGKKEIEKLIDTAEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L D L +R L KK+ +E
Sbjct: 232 LGNYRGNCAWVAPLAWHPTNQNAVIVCDLSGDINNLLSKSAVDLRQDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ ++H+N+ PI+ +L N R D N+ L+ I +K+
Sbjct: 292 SSIPLKLVHINKCPILAPAKTLLPENAA-RLGIDRQHCLDNLAKLRQSLD---IREKVI- 346
Query: 238 DYKINNSDLEL----NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+I + + E N++ ELYN F S D +AILR + +KL+ FE+K++ EL
Sbjct: 347 --EIFSGEREFEPSNNVETELYNGFFSNADKNNMAILRDLPAEKLAEHGLAFEDKRIPEL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYR 318
+F YRAR+F +TL+ E +W+KYR
Sbjct: 405 LFHYRARHFYKTLNRAEQIKWQKYR 429
>gi|425273168|ref|ZP_18664590.1| exonuclease [Escherichia coli TW15901]
gi|425283667|ref|ZP_18674716.1| exonuclease [Escherichia coli TW00353]
gi|408193584|gb|EKI19103.1| exonuclease [Escherichia coli TW15901]
gi|408202358|gb|EKI27471.1| exonuclease [Escherichia coli TW00353]
Length = 474
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++ PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDDLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 LLKALWQYAEEIV 474
>gi|45441270|ref|NP_992809.1| exonuclease I [Yersinia pestis biovar Microtus str. 91001]
gi|108806850|ref|YP_650766.1| exonuclease I [Yersinia pestis Antiqua]
gi|149366477|ref|ZP_01888511.1| exodeoxyribonuclease I [Yersinia pestis CA88-4125]
gi|161484780|ref|NP_669913.2| exonuclease I [Yersinia pestis KIM10+]
gi|165924676|ref|ZP_02220508.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939554|ref|ZP_02228099.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
IP275]
gi|167400240|ref|ZP_02305753.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421764|ref|ZP_02313517.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167470369|ref|ZP_02335073.1| exodeoxyribonuclease I [Yersinia pestis FV-1]
gi|218928697|ref|YP_002346572.1| exonuclease I [Yersinia pestis CO92]
gi|229841541|ref|ZP_04461700.1| exonuclease I [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843652|ref|ZP_04463795.1| exonuclease I [Yersinia pestis biovar Orientalis str. India 195]
gi|229894245|ref|ZP_04509428.1| exonuclease I [Yersinia pestis Pestoides A]
gi|384140557|ref|YP_005523259.1| exonuclease I [Yersinia pestis A1122]
gi|384415069|ref|YP_005624431.1| exonuclease I [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420546300|ref|ZP_15044304.1| exodeoxyribonuclease I [Yersinia pestis PY-01]
gi|420551616|ref|ZP_15049059.1| exodeoxyribonuclease I [Yersinia pestis PY-02]
gi|420557164|ref|ZP_15053952.1| exodeoxyribonuclease I [Yersinia pestis PY-03]
gi|420562708|ref|ZP_15058833.1| exodeoxyribonuclease I [Yersinia pestis PY-04]
gi|420567719|ref|ZP_15063373.1| exodeoxyribonuclease I [Yersinia pestis PY-05]
gi|420573425|ref|ZP_15068545.1| exodeoxyribonuclease I [Yersinia pestis PY-06]
gi|420578694|ref|ZP_15073322.1| exodeoxyribonuclease I [Yersinia pestis PY-07]
gi|420584068|ref|ZP_15078203.1| exodeoxyribonuclease I [Yersinia pestis PY-08]
gi|420589225|ref|ZP_15082848.1| exodeoxyribonuclease I [Yersinia pestis PY-09]
gi|420594545|ref|ZP_15087637.1| exodeoxyribonuclease I [Yersinia pestis PY-10]
gi|420600232|ref|ZP_15092718.1| exodeoxyribonuclease I [Yersinia pestis PY-11]
gi|420605692|ref|ZP_15097608.1| exodeoxyribonuclease I [Yersinia pestis PY-12]
gi|420611046|ref|ZP_15102444.1| exodeoxyribonuclease I [Yersinia pestis PY-13]
gi|420616373|ref|ZP_15107144.1| exonuclease family protein [Yersinia pestis PY-14]
gi|420621754|ref|ZP_15111911.1| exodeoxyribonuclease I [Yersinia pestis PY-15]
gi|420626789|ref|ZP_15116479.1| exodeoxyribonuclease I [Yersinia pestis PY-16]
gi|420632001|ref|ZP_15121177.1| exodeoxyribonuclease I [Yersinia pestis PY-19]
gi|420637110|ref|ZP_15125759.1| exodeoxyribonuclease I [Yersinia pestis PY-25]
gi|420642656|ref|ZP_15130782.1| exodeoxyribonuclease I [Yersinia pestis PY-29]
gi|420647845|ref|ZP_15135513.1| exodeoxyribonuclease I [Yersinia pestis PY-32]
gi|420653476|ref|ZP_15140570.1| exodeoxyribonuclease I [Yersinia pestis PY-34]
gi|420658997|ref|ZP_15145536.1| exodeoxyribonuclease I [Yersinia pestis PY-36]
gi|420664308|ref|ZP_15150284.1| exodeoxyribonuclease I [Yersinia pestis PY-42]
gi|420669252|ref|ZP_15154774.1| exonuclease family protein [Yersinia pestis PY-45]
gi|420674573|ref|ZP_15159619.1| exodeoxyribonuclease I [Yersinia pestis PY-46]
gi|420680138|ref|ZP_15164654.1| exodeoxyribonuclease I [Yersinia pestis PY-47]
gi|420685405|ref|ZP_15169370.1| exodeoxyribonuclease I [Yersinia pestis PY-48]
gi|420690587|ref|ZP_15173949.1| exodeoxyribonuclease I [Yersinia pestis PY-52]
gi|420696391|ref|ZP_15179035.1| exodeoxyribonuclease I [Yersinia pestis PY-53]
gi|420701864|ref|ZP_15183643.1| exonuclease family protein [Yersinia pestis PY-54]
gi|420707722|ref|ZP_15188492.1| exodeoxyribonuclease I [Yersinia pestis PY-55]
gi|420713086|ref|ZP_15193298.1| exodeoxyribonuclease I [Yersinia pestis PY-56]
gi|420718508|ref|ZP_15198036.1| exodeoxyribonuclease I [Yersinia pestis PY-58]
gi|420724072|ref|ZP_15202844.1| exodeoxyribonuclease I [Yersinia pestis PY-59]
gi|420729676|ref|ZP_15207857.1| exodeoxyribonuclease I [Yersinia pestis PY-60]
gi|420734726|ref|ZP_15212420.1| exodeoxyribonuclease I [Yersinia pestis PY-61]
gi|420740194|ref|ZP_15217343.1| exodeoxyribonuclease I [Yersinia pestis PY-63]
gi|420745652|ref|ZP_15222091.1| exodeoxyribonuclease I [Yersinia pestis PY-64]
gi|420751333|ref|ZP_15227004.1| exodeoxyribonuclease I [Yersinia pestis PY-65]
gi|420756722|ref|ZP_15231600.1| exodeoxyribonuclease I [Yersinia pestis PY-66]
gi|420762458|ref|ZP_15236355.1| exodeoxyribonuclease I [Yersinia pestis PY-71]
gi|420767704|ref|ZP_15241086.1| exodeoxyribonuclease I [Yersinia pestis PY-72]
gi|420772685|ref|ZP_15245565.1| exodeoxyribonuclease I [Yersinia pestis PY-76]
gi|420778126|ref|ZP_15250407.1| exodeoxyribonuclease I [Yersinia pestis PY-88]
gi|420783683|ref|ZP_15255272.1| exodeoxyribonuclease I [Yersinia pestis PY-89]
gi|420788977|ref|ZP_15259960.1| exonuclease family protein [Yersinia pestis PY-90]
gi|420794451|ref|ZP_15264897.1| exodeoxyribonuclease I [Yersinia pestis PY-91]
gi|420799565|ref|ZP_15269496.1| exodeoxyribonuclease I [Yersinia pestis PY-92]
gi|420804917|ref|ZP_15274317.1| exodeoxyribonuclease I [Yersinia pestis PY-93]
gi|420810197|ref|ZP_15279089.1| exonuclease family protein [Yersinia pestis PY-94]
gi|420815868|ref|ZP_15284183.1| exodeoxyribonuclease I [Yersinia pestis PY-95]
gi|420821064|ref|ZP_15288873.1| exodeoxyribonuclease I [Yersinia pestis PY-96]
gi|420826153|ref|ZP_15293430.1| exodeoxyribonuclease I [Yersinia pestis PY-98]
gi|420831904|ref|ZP_15298635.1| exodeoxyribonuclease I [Yersinia pestis PY-99]
gi|420836747|ref|ZP_15302997.1| exodeoxyribonuclease I [Yersinia pestis PY-100]
gi|420841906|ref|ZP_15307672.1| exodeoxyribonuclease I [Yersinia pestis PY-101]
gi|420847543|ref|ZP_15312754.1| exodeoxyribonuclease I [Yersinia pestis PY-102]
gi|420852982|ref|ZP_15317503.1| exodeoxyribonuclease I [Yersinia pestis PY-103]
gi|420858464|ref|ZP_15322200.1| exodeoxyribonuclease I [Yersinia pestis PY-113]
gi|421763022|ref|ZP_16199819.1| exonuclease I [Yersinia pestis INS]
gi|45436130|gb|AAS61686.1| exodeoxyribonuclease I [Yersinia pestis biovar Microtus str. 91001]
gi|108778763|gb|ABG12821.1| Exodeoxyribonuclease I subunit C [Yersinia pestis Antiqua]
gi|115347308|emb|CAL20203.1| exodeoxyribonuclease I [Yersinia pestis CO92]
gi|149290851|gb|EDM40926.1| exodeoxyribonuclease I [Yersinia pestis CA88-4125]
gi|165912470|gb|EDR31102.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923736|gb|EDR40868.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166960249|gb|EDR56270.1| exodeoxyribonuclease I [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050189|gb|EDR61597.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|229689260|gb|EEO81323.1| exonuclease I [Yersinia pestis biovar Orientalis str. India 195]
gi|229697907|gb|EEO87954.1| exonuclease I [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229703643|gb|EEO90659.1| exonuclease I [Yersinia pestis Pestoides A]
gi|320015573|gb|ADV99144.1| exonuclease I [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342855686|gb|AEL74239.1| exonuclease I [Yersinia pestis A1122]
gi|391428254|gb|EIQ90254.1| exodeoxyribonuclease I [Yersinia pestis PY-01]
gi|391429677|gb|EIQ91502.1| exodeoxyribonuclease I [Yersinia pestis PY-02]
gi|391431036|gb|EIQ92664.1| exodeoxyribonuclease I [Yersinia pestis PY-03]
gi|391443880|gb|EIR04157.1| exodeoxyribonuclease I [Yersinia pestis PY-04]
gi|391445146|gb|EIR05303.1| exodeoxyribonuclease I [Yersinia pestis PY-05]
gi|391448130|gb|EIR07974.1| exodeoxyribonuclease I [Yersinia pestis PY-06]
gi|391460638|gb|EIR19321.1| exodeoxyribonuclease I [Yersinia pestis PY-07]
gi|391461641|gb|EIR20234.1| exodeoxyribonuclease I [Yersinia pestis PY-08]
gi|391463743|gb|EIR22114.1| exodeoxyribonuclease I [Yersinia pestis PY-09]
gi|391476955|gb|EIR34032.1| exodeoxyribonuclease I [Yersinia pestis PY-10]
gi|391478425|gb|EIR35345.1| exodeoxyribonuclease I [Yersinia pestis PY-11]
gi|391478521|gb|EIR35429.1| exodeoxyribonuclease I [Yersinia pestis PY-12]
gi|391492543|gb|EIR47992.1| exodeoxyribonuclease I [Yersinia pestis PY-13]
gi|391493510|gb|EIR48854.1| exodeoxyribonuclease I [Yersinia pestis PY-15]
gi|391495782|gb|EIR50826.1| exonuclease family protein [Yersinia pestis PY-14]
gi|391508568|gb|EIR62290.1| exodeoxyribonuclease I [Yersinia pestis PY-16]
gi|391508577|gb|EIR62298.1| exodeoxyribonuclease I [Yersinia pestis PY-19]
gi|391513362|gb|EIR66583.1| exodeoxyribonuclease I [Yersinia pestis PY-25]
gi|391523931|gb|EIR76206.1| exodeoxyribonuclease I [Yersinia pestis PY-29]
gi|391526494|gb|EIR78512.1| exodeoxyribonuclease I [Yersinia pestis PY-34]
gi|391527389|gb|EIR79308.1| exodeoxyribonuclease I [Yersinia pestis PY-32]
gi|391539816|gb|EIR90506.1| exodeoxyribonuclease I [Yersinia pestis PY-36]
gi|391542203|gb|EIR92682.1| exodeoxyribonuclease I [Yersinia pestis PY-42]
gi|391543466|gb|EIR93790.1| exonuclease family protein [Yersinia pestis PY-45]
gi|391557431|gb|EIS06425.1| exodeoxyribonuclease I [Yersinia pestis PY-46]
gi|391557795|gb|EIS06749.1| exodeoxyribonuclease I [Yersinia pestis PY-47]
gi|391559176|gb|EIS07983.1| exodeoxyribonuclease I [Yersinia pestis PY-48]
gi|391572613|gb|EIS19817.1| exodeoxyribonuclease I [Yersinia pestis PY-52]
gi|391573120|gb|EIS20237.1| exodeoxyribonuclease I [Yersinia pestis PY-53]
gi|391583233|gb|EIS28911.1| exonuclease family protein [Yersinia pestis PY-54]
gi|391585024|gb|EIS30473.1| exodeoxyribonuclease I [Yersinia pestis PY-55]
gi|391588308|gb|EIS33360.1| exodeoxyribonuclease I [Yersinia pestis PY-56]
gi|391601442|gb|EIS44868.1| exodeoxyribonuclease I [Yersinia pestis PY-58]
gi|391601834|gb|EIS45204.1| exodeoxyribonuclease I [Yersinia pestis PY-60]
gi|391603584|gb|EIS46750.1| exodeoxyribonuclease I [Yersinia pestis PY-59]
gi|391616246|gb|EIS57925.1| exodeoxyribonuclease I [Yersinia pestis PY-61]
gi|391617000|gb|EIS58591.1| exodeoxyribonuclease I [Yersinia pestis PY-63]
gi|391622971|gb|EIS63834.1| exodeoxyribonuclease I [Yersinia pestis PY-64]
gi|391628193|gb|EIS68301.1| exodeoxyribonuclease I [Yersinia pestis PY-65]
gi|391639436|gb|EIS78117.1| exodeoxyribonuclease I [Yersinia pestis PY-71]
gi|391640001|gb|EIS78605.1| exodeoxyribonuclease I [Yersinia pestis PY-66]
gi|391641668|gb|EIS80034.1| exodeoxyribonuclease I [Yersinia pestis PY-72]
gi|391651517|gb|EIS88679.1| exodeoxyribonuclease I [Yersinia pestis PY-76]
gi|391656770|gb|EIS93354.1| exodeoxyribonuclease I [Yersinia pestis PY-88]
gi|391661401|gb|EIS97449.1| exodeoxyribonuclease I [Yersinia pestis PY-89]
gi|391664640|gb|EIT00335.1| exonuclease family protein [Yersinia pestis PY-90]
gi|391671396|gb|EIT06344.1| exodeoxyribonuclease I [Yersinia pestis PY-91]
gi|391682444|gb|EIT16324.1| exodeoxyribonuclease I [Yersinia pestis PY-93]
gi|391683962|gb|EIT17690.1| exodeoxyribonuclease I [Yersinia pestis PY-92]
gi|391684625|gb|EIT18270.1| exonuclease family protein [Yersinia pestis PY-94]
gi|391696281|gb|EIT28780.1| exodeoxyribonuclease I [Yersinia pestis PY-95]
gi|391699673|gb|EIT31841.1| exodeoxyribonuclease I [Yersinia pestis PY-96]
gi|391701047|gb|EIT33087.1| exodeoxyribonuclease I [Yersinia pestis PY-98]
gi|391709925|gb|EIT41049.1| exodeoxyribonuclease I [Yersinia pestis PY-99]
gi|391717106|gb|EIT47503.1| exodeoxyribonuclease I [Yersinia pestis PY-100]
gi|391717620|gb|EIT47952.1| exodeoxyribonuclease I [Yersinia pestis PY-101]
gi|391728357|gb|EIT57477.1| exodeoxyribonuclease I [Yersinia pestis PY-102]
gi|391731370|gb|EIT60086.1| exodeoxyribonuclease I [Yersinia pestis PY-103]
gi|391735847|gb|EIT63944.1| exodeoxyribonuclease I [Yersinia pestis PY-113]
gi|411177228|gb|EKS47243.1| exonuclease I [Yersinia pestis INS]
Length = 476
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ + L ++ F++ +LE L+F
Sbjct: 350 LFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|238761111|ref|ZP_04622088.1| Exodeoxyribonuclease I [Yersinia kristensenii ATCC 33638]
gi|238761364|ref|ZP_04622340.1| Exodeoxyribonuclease I [Yersinia kristensenii ATCC 33638]
gi|238700338|gb|EEP93079.1| Exodeoxyribonuclease I [Yersinia kristensenii ATCC 33638]
gi|238700591|gb|EEP93331.1| Exodeoxyribonuclease I [Yersinia kristensenii ATCC 33638]
Length = 476
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 193/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDISDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK---NSFK 177
MF + S + P+ HP NKN +I +L D L D + +R+ L ++ N+
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLNAQD 293
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IP+ ++H+N+ P++ +L+ N R D +N++ + N I +K+
Sbjct: 294 AAIPLKLVHINKCPVLAPAKTLLAENAE-RLGIDRQRCLRNLQL---LRQNPQIREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ P+ L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTDPQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTKIL 354
+RARN+ TL+ E +RW +R N + + L++E + ++ +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLAHRREAL-----NPERVQEYVLQLEQFYNQYEGDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|113461015|ref|YP_719082.1| exonuclease I [Haemophilus somnus 129PT]
gi|112823058|gb|ABI25147.1| Exodeoxyribonuclease I subunit C [Haemophilus somnus 129PT]
Length = 486
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 203/376 (53%), Gaps = 21/376 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDLI+V++A Y L P GI W Y ++G PSF+LE L+ VN +
Sbjct: 122 FYRNFIDPYEYSWKNGNSRWDLIDVVRACYALRPDGINWAYDDDGMPSFRLEKLTQVNGI 181
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF F R K+ V I +P +++ M
Sbjct: 182 EHGNAHDAMADVYATIAMAKLIKQKQPKLFQFFFENRGKREVEKLIDIANMKPLVHVSGM 241
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ S + P+ HP+N+N +I +L D L ++R L K ++
Sbjct: 242 LGNYRGNTSWVVPLAWHPINQNAVIVCDLAKDIDDLLAKSAVELRQNLYTPKVELEQHNI 301
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK--CASSILNNTYIWKKI 235
+P+ ++H+N+ PI+ +L N + D +N++ S + + I +I
Sbjct: 302 LPVPLKLVHINKCPILAPAKTLLPENAT-KLGIDREFCLQNLQKLRQSPDIRDKVI--EI 358
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + + +SD N++ ELY F S D + ILR +SP+KL+ N F +K++ +L+
Sbjct: 359 FHDEREVIHSD---NVETELYKQFFSNNDKNNMTILRQLSPEKLNEHNLSFSDKRISDLL 415
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTK 352
F YRAR+F +TL E +W+KYR + ++ F ++ L++ + N +
Sbjct: 416 FHYRARHFYKTLDRSEQIKWQKYRQRKLEK------SVVQFEESLQRLVEEYQNNPEELL 469
Query: 353 ILNALLMYGKSITQKI 368
+L + YG ++ K+
Sbjct: 470 LLQQVYEYGATLLSKL 485
>gi|293446370|ref|ZP_06662792.1| exodeoxyribonuclease I [Escherichia coli B088]
gi|291323200|gb|EFE62628.1| exodeoxyribonuclease I [Escherichia coli B088]
Length = 475
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E + W ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQCWLEHRRQVFTPE-----FLQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|257464641|ref|ZP_05629012.1| exonuclease I [Actinobacillus minor 202]
gi|257450301|gb|EEV24344.1| exonuclease I [Actinobacillus minor 202]
Length = 514
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 17/372 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL++V++A Y L P GI W G P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDVVRACYALRPEGIEWVTDEEGIPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDA+SDV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 SHENAHDAMSDVYATIAMAKLIKEKQPKLFQFFFEHRGKKEIEKLIDTAEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP N+N +I +L D + L +++ L K+ E
Sbjct: 232 LGNYRGNTAWVVPLAWHPTNQNAVIVCDLSGDIQGLLNESSEVLKNRLYTKRTELSEQEK 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC--ASSILNNTYIWKKIF 236
+P+ ++H+N+ PI ++ KVL R D +N+K A L + +
Sbjct: 292 PVPLKLVHINKCPI-LAPAKVLLPENAARLGIDREQCLENLKALKAQKSLVREKVIEIFT 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
D SD N++ LY+ F S+ D ++ILRS++P++L++ F + ++E+L+F
Sbjct: 351 EDRTFAPSD---NVETSLYDGFFSQADKNNMSILRSLAPEELAHHGLQFADPRVEKLLFH 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKIL 354
YRAR++ ETL+ E +W+KY + ++ F IE+L + +E K+L
Sbjct: 408 YRARHYPETLTRAEQIKWQKYCHQQLDSRAEQ------FAQSIETLFQIHHDDEEKVKLL 461
Query: 355 NALLMYGKSITQ 366
L Y I+Q
Sbjct: 462 EELTAYVAQISQ 473
>gi|365107971|ref|ZP_09336113.1| exodeoxyribonuclease I [Citrobacter freundii 4_7_47CFAA]
gi|363640888|gb|EHL80316.1| exodeoxyribonuclease I [Citrobacter freundii 4_7_47CFAA]
Length = 474
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 181/328 (55%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A I P +P +++
Sbjct: 174 IEHTNAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTSKADLGDNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N +I K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPHIRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FADAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW +R F
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLDHRRQVF 434
>gi|108812583|ref|YP_648350.1| exonuclease I [Yersinia pestis Nepal516]
gi|229902976|ref|ZP_04518092.1| exonuclease I [Yersinia pestis Nepal516]
gi|108776231|gb|ABG18750.1| Exodeoxyribonuclease I subunit C [Yersinia pestis Nepal516]
gi|229679886|gb|EEO75986.1| exonuclease I [Yersinia pestis Nepal516]
Length = 476
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ + L ++ F++ +LE L+F
Sbjct: 350 LFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLTLL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|170769782|ref|ZP_02904235.1| exodeoxyribonuclease I [Escherichia albertii TW07627]
gi|170121396|gb|EDS90327.1| exodeoxyribonuclease I [Escherichia albertii TW07627]
Length = 475
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 197/370 (53%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAIAKLVKTRQPRLFDYLYTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 351 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 410
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L ++ + K+ L
Sbjct: 411 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQSYADELQMLAQQYADDKEKVALLK 465
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 466 ALWQYAEEIV 475
>gi|21959485|gb|AAM86164.1|AE013862_9 exonuclease I [Yersinia pestis KIM10+]
Length = 497
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 135 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 194
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 195 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 254
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 255 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 314
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 315 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 370
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ + L ++ F++ +LE L+F
Sbjct: 371 LFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFR 430
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 431 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 485
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 486 KALFEYAKGLV 496
>gi|417275788|ref|ZP_12063121.1| exodeoxyribonuclease I [Escherichia coli 3.2303]
gi|345432728|dbj|BAK69057.1| exonuclease I [Escherichia coli O157:H16]
gi|386241624|gb|EII78541.1| exodeoxyribonuclease I [Escherichia coli 3.2303]
Length = 475
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++ PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDDLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL Y E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|59712089|ref|YP_204865.1| exonuclease I [Vibrio fischeri ES114]
gi|59480190|gb|AAW85977.1| exonuclease I [Vibrio fischeri ES114]
Length = 474
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 193/367 (52%), Gaps = 12/367 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY W+N SRWDL++V++A Y L P GI WP G+PSFKLE+LS N +
Sbjct: 114 LYRNFFEPYGWSWQNGNSRWDLLDVMRAVYALRPEGINWPKDEEGRPSFKLENLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA+ ++ P++FN++LS+R KK I P +++ M
Sbjct: 174 EHANAHDAMADVIATIELAKKVKQAQPKMFNYLLSMRNKKKAATLIDIVEMTPLMHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F IS + P+ HP N N +IT +L DP FL ++ ++ + K++ D
Sbjct: 234 FGVDRGNISWIVPVAWHPTNNNAVITIDLALDPSVFLELNVEELHQRMYTKRSELGPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ K L++ D +N+K I N I +K+
Sbjct: 294 PVPVKLVHLNKCP-VLAPAKTLTAENAANLNVDREACLRNLKV---IRENPEIRQKLIEL 349
Query: 239 YKIN-NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y I N + N+D LY+ F S D + I+R +P++L + + +++ L+F Y
Sbjct: 350 YSIEPNYEKSTNVDTLLYDGFFSHADKATIDIIRQSTPEQLIDFEPNVTDPRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+ E RW + + ++ Y + L +ES + N+ IL A+
Sbjct: 410 RARNFPHTLNEAEQLRWHAH-LQDYFQTHLPDYEASFENLYLES---EGNDKKVAILKAV 465
Query: 358 LMYGKSI 364
Y + +
Sbjct: 466 YNYVQQL 472
>gi|418943655|ref|ZP_13496822.1| exonuclease I, partial [Escherichia coli O157:H43 str. T22]
gi|375321050|gb|EHS66928.1| exonuclease I, partial [Escherichia coli O157:H43 str. T22]
Length = 437
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 181/328 (55%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
M + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MLGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL Y E +RW ++R F
Sbjct: 408 FNYRARNFPGTLDYAEQQRWLEHRRQVF 435
>gi|415923244|ref|ZP_11554755.1| Exodeoxyribonuclease I subunit C [Herbaspirillum frisingense GSF30]
gi|407760528|gb|EKF69794.1| Exodeoxyribonuclease I subunit C [Herbaspirillum frisingense GSF30]
Length = 282
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 114/157 (72%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNLI+PY REW N C RWDL++V++ Y L P GI WP K +G SFKLEHLS N
Sbjct: 110 MFWRNLIDPYAREWANGCGRWDLLDVVRLTYALRPDGIQWPTKEDGSVSFKLEHLSKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDALSDVRAT+ LARLIR +NPRLF+F L+L KK+ AEIG P A+PF +++
Sbjct: 170 LLHEAAHDALSDVRATIALARLIRQHNPRLFDFALALHKKEKAAAEIGLPAAKPFLHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKF 157
MF ++LMWP+ +HP NKN +I W+L +DP +
Sbjct: 230 MFPVAQGCLALMWPLGMHPTNKNEVIAWDLGYDPAEL 266
>gi|162419714|ref|YP_001607449.1| exonuclease I [Yersinia pestis Angola]
gi|166009382|ref|ZP_02230280.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211647|ref|ZP_02237682.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167424322|ref|ZP_02316075.1| exodeoxyribonuclease I [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270486761|ref|ZP_06203835.1| exonuclease C-terminal domain protein [Yersinia pestis KIM D27]
gi|294503532|ref|YP_003567594.1| exodeoxyribonuclease I [Yersinia pestis Z176003]
gi|384121979|ref|YP_005504599.1| exodeoxyribonuclease I [Yersinia pestis D106004]
gi|384126021|ref|YP_005508635.1| exodeoxyribonuclease I [Yersinia pestis D182038]
gi|162352529|gb|ABX86477.1| exodeoxyribonuclease I [Yersinia pestis Angola]
gi|165991937|gb|EDR44238.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207418|gb|EDR51898.1| exodeoxyribonuclease I [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167057171|gb|EDR66934.1| exodeoxyribonuclease I [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262361575|gb|ACY58296.1| exodeoxyribonuclease I [Yersinia pestis D106004]
gi|262365685|gb|ACY62242.1| exodeoxyribonuclease I [Yersinia pestis D182038]
gi|270335265|gb|EFA46042.1| exonuclease C-terminal domain protein [Yersinia pestis KIM D27]
gi|294353991|gb|ADE64332.1| exodeoxyribonuclease I [Yersinia pestis Z176003]
Length = 487
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 125 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 184
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 185 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 244
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 245 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 304
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 305 SAIPIKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 360
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ + L ++ F++ +LE L+F
Sbjct: 361 LFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFR 420
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 421 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 475
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 476 KALFEYAKGLV 486
>gi|357405578|ref|YP_004917502.1| exodeoxyribonuclease I [Methylomicrobium alcaliphilum 20Z]
gi|351718243|emb|CCE23910.1| Exodeoxyribonuclease I [Methylomicrobium alcaliphilum 20Z]
Length = 484
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 197/364 (54%), Gaps = 9/364 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY+REW+N SRWDLI+V++A Y L P GI WP G +F+LE L+ N +
Sbjct: 111 LYRNLYDPYQREWQNGNSRWDLIDVVRAAYALRPGGIEWPVNEEGLVTFRLEELTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +A+L+R+ P+L+ F+ R K + +P +I+
Sbjct: 171 EHAMAHDALSDVYATIAVAKLVRDTQPKLYKFLFDNRVKSAANRLLQTGSFKPVVHISGK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
++ ++ ++++ PIC HP N N ++ ++L DP+ L +++I+ + E
Sbjct: 231 YAVRNHCMAVVLPICRHPSNSNGVVVYDLSSDPEILLNLSVDEIKQRIFTATKDLPEGVE 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +H+N+ P V++ + V+ + R D++ ++ I I N++ I KI
Sbjct: 291 RIPLKTVHVNKCP-VLAPIAVIRPDDAARLNLDIDRCYRYI---DKIRNDSNILDKIAQV 346
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ + + + + D +Y F S D + + P+ L+N+ F + +L E+ F Y
Sbjct: 347 FETDFPESDADPDLMIYSGGFFSDSDKKAMEKVHKTLPENLANLRLNFSDPRLPEMFFRY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARN+ ETL+ +E RW K R +N IN ++ +++ L+ + D IL+AL
Sbjct: 407 RARNYPETLNEEERTRWMKDCAERLTGAVSNCMTINEYFSKVQE-LQSDSSADPTILSAL 465
Query: 358 LMYG 361
Y
Sbjct: 466 REYA 469
>gi|397658822|ref|YP_006499524.1| exodeoxyribonuclease I [Klebsiella oxytoca E718]
gi|394347073|gb|AFN33194.1| Exodeoxyribonuclease I [Klebsiella oxytoca E718]
Length = 474
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDAPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+PI ++HLN+ P V++ L R ++ +N A + N + +K I
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLEN---AQLLRANPQVREKAVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|386741755|ref|YP_006214934.1| exonuclease I [Providencia stuartii MRSN 2154]
gi|384478448|gb|AFH92243.1| exonuclease I [Providencia stuartii MRSN 2154]
Length = 475
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 199/371 (53%), Gaps = 16/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP + G PS +LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQQGNSRWDLLDTVRACFALRPEGIIWPENDEGLPSMRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+FN+ LR K V I P +++
Sbjct: 174 IAHENAHDAMSDVLATINMAKLLKAAQPRMFNYFYQLRNKNKVSQLIDIVDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SYISL+ P+ HP N+N +I +L D + + +R+ L K +
Sbjct: 234 MFGALRSYISLVAPLAWHPDNRNAVIMCDLAADISPLVDLPVETLRERLYTPKTELDGEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+ PI+ K L + R D + +N++ + + +IF
Sbjct: 294 PVPIKLVHINKCPILAPE-KTLRTEDAERTGVDRDLCLRNLEILRKHPDIRHKVIEIFAQ 352
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ D ++D ++Y+ F S D + I+R K L ++ FE+ +++EL F Y
Sbjct: 353 AQPFEEPD---DVDAQIYSGFFSSSDRSTMDIIRETPEKNLPALDLTFEDPRMKELFFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLE-IESLL--KKANEHDTKIL 354
+ARN+ TLSY E +RW ++R R Y ++ L M Y++ IESL+ + + K L
Sbjct: 410 KARNYPSTLSYDEQQRWLQHR--RDYFTESRL----MEYMQSIESLMIEHQNDVERCKQL 463
Query: 355 NALLMYGKSIT 365
AL+ Y +
Sbjct: 464 KALVNYAAELA 474
>gi|424816731|ref|ZP_18241882.1| exonuclease I [Escherichia fergusonii ECD227]
gi|325497751|gb|EGC95610.1| exonuclease I [Escherichia fergusonii ECD227]
Length = 475
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 196/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIIWPENEEGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K + A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAQLVKARQPRLFDYLYTHRNKHKLTALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R D N+K + N + K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIDRQHCLDNLKV---LRENPQVRDKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL E +RW ++R F + + EI+ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDDNEQQRWLEHRRQVFTPAF-----LQGYAEEIQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAQEIV 475
>gi|398859719|ref|ZP_10615389.1| exonuclease I, partial [Pseudomonas sp. GM79]
gi|398236368|gb|EJN22155.1| exonuclease I, partial [Pseudomonas sp. GM79]
Length = 355
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 197/359 (54%), Gaps = 11/359 (3%)
Query: 15 KNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVR 74
+ SRWDLI+V++A Y L P G+ WP G+ + KLE L+ N + H AH+ALSDVR
Sbjct: 1 QGGNSRWDLIDVVRAAYALRPDGLVWPRDEEGRVTLKLERLTAANGIDHGHAHEALSDVR 60
Query: 75 ATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWP 134
AT+ LARLIR P+L++++ LR K+ V+ +I + +P +I+ FS+ +Y+ ++ P
Sbjct: 61 ATIALARLIREKQPKLYDWLFQLRSKQKVMDQIR--LLQPMVHISGRFSAARNYMGVVLP 118
Query: 135 ICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSP 191
+ HP N+N LI +L DP+ L D +R L +++ E +P+ +IH+N+ P
Sbjct: 119 LAWHPRNRNALIVCDLHLDPQGLLDLDAETLRQRLYTRRDDLAEGELPVPLKLIHINKCP 178
Query: 192 IVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELNI 250
V++ L VL R D+ + A + + ++W+ K+ Y ++ +
Sbjct: 179 -VVAPLSVLRPVDQQRLGLDMALYQER---ALRLSDAQHVWRDKVAGIYASDDFSPSQDP 234
Query: 251 DEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKE 310
+++LY+ FI +D +R+ P +L+ + F++++L EL+F YRARNF +TLS +E
Sbjct: 235 EQQLYDGFIGDRDRRLCEQVRAADPAQLAQEQWPFDDERLPELLFRYRARNFPDTLSLEE 294
Query: 311 LKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILNALLMYGKSITQKI 368
+RW+ + R + N +N F L A ++L+ + +S+ +++
Sbjct: 295 QERWRIFCQKRLCAPEWGAPNTLNSFLEAAAQLTTSATSFQREVLDQWQNHVQSLRKRL 353
>gi|375261764|ref|YP_005020934.1| exonuclease I [Klebsiella oxytoca KCTC 1686]
gi|365911242|gb|AEX06695.1| exonuclease I [Klebsiella oxytoca KCTC 1686]
Length = 474
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENEEGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPRLFDYLYAHRNKRKLATLIDVPQIKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP N+N +I +L D L D + +R+ L K+ +
Sbjct: 234 MFGAARGNTSLVAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKSELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+PI ++HLN+ P V++ L R ++ +N A + N + +K I
Sbjct: 294 AVPIKLVHLNKCP-VLAQQNTLRPQDADRLGINIQRCLEN---AQLLRANPQVREKAVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E L+
Sbjct: 350 FAEAEPFVPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARN+ TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 407 FNYRARNYPGTLDEAEQQRWLEHRRQVFTPEF-----LQAYADELQMLYQQYADDKEKLA 461
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 462 QLKALWQYAQDIV 474
>gi|429122033|ref|ZP_19182635.1| Exodeoxyribonuclease I [Cronobacter sakazakii 680]
gi|426323483|emb|CCK13372.1| Exodeoxyribonuclease I [Cronobacter sakazakii 680]
Length = 475
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 192/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + I +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L + + +R+ L K + +
Sbjct: 234 MFGAWRGNTSWIAPVAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGDAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++ LN+ P V++ L R D N+K +F D
Sbjct: 294 AVPVKLVQLNKCP-VLAQANTLRPEDAERLGIDRQHCLNNLKVLRDSPQVREKLVALFAD 352
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+D N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 353 APPFPPTD---NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E RW +R F + Y + M Y + ES ++ T +L
Sbjct: 410 RARNFPGTLSEQEQARWLAHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLK 464
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 465 ALYQYAQEI 473
>gi|422805029|ref|ZP_16853461.1| exonuclease [Escherichia fergusonii B253]
gi|324114057|gb|EGC08030.1| exonuclease [Escherichia fergusonii B253]
Length = 474
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 196/372 (52%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIIWPENEEGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K + A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKARQPRLFDYLYTHRNKHKLTALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R D N+K + N + K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIDRQHCLDNLKV---LRENPQVRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL E +RW ++R F + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDDNEQQRWLEHRRQVFTPA-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAQEI 473
>gi|218549424|ref|YP_002383215.1| exonuclease I [Escherichia fergusonii ATCC 35469]
gi|218356965|emb|CAQ89597.1| exonuclease I [Escherichia fergusonii ATCC 35469]
Length = 474
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 196/372 (52%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGIIWPENEEGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K + A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKARQPRLFDYLYTHRNKHKLTALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R D N+K + N + K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIDRQHCLDNLKV---LRENPQVRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL E +RW ++R F + + EI+ L ++ + K+
Sbjct: 407 FNYRARNFPGTLDDNEQQRWLEHRRQVFTPA-----FLQGYAEEIQMLAQQYADDKEKVA 461
Query: 354 -LNALLMYGKSI 364
L AL Y + I
Sbjct: 462 LLKALWQYAQEI 473
>gi|423686248|ref|ZP_17661056.1| exonuclease I [Vibrio fischeri SR5]
gi|371494316|gb|EHN69914.1| exonuclease I [Vibrio fischeri SR5]
Length = 474
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 193/367 (52%), Gaps = 12/367 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY W+N SRWDL++V++A Y L P GI WP G+PSFKLE+LS N +
Sbjct: 114 LYRNFFEPYGWSWQNGNSRWDLLDVMRAVYALRPEGINWPKDEEGRPSFKLENLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA+ ++ P++FN++LS+R KK I P +++ M
Sbjct: 174 EHANAHDAMADVIATIELAKKVKQAQPKMFNYLLSMRNKKKAATLIDIVEMTPLMHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F IS + P+ HP N N +IT +L DP FL ++ ++ + K++ D
Sbjct: 234 FGVDRGNISWIVPVAWHPTNNNAVITIDLALDPSVFLELNVEELHQRMYTKRSELGPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ K L++ D +N+K I N I +K+
Sbjct: 294 PVPVKLVHLNKCP-VLAPAKTLTAENAANLNVDREACLRNLKV---IRENPEIRQKLIDL 349
Query: 239 YKIN-NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y I N + N+D LY+ F S D + I+R +P++L + + +++ L+F Y
Sbjct: 350 YSIEPNYEKSTNVDTLLYDGFFSHADKATIDIIRQSTPEQLIDFEPNVTDPRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+ E RW + + ++ Y + L +ES + N+ IL A+
Sbjct: 410 RARNFPHTLNEAEQLRWHAH-LQDYFQTHLPDYEASFENLYLES---EGNDKKVAILKAV 465
Query: 358 LMYGKSI 364
Y + +
Sbjct: 466 YNYVQQL 472
>gi|145598704|ref|YP_001162780.1| exonuclease I [Yersinia pestis Pestoides F]
gi|145210400|gb|ABP39807.1| Exodeoxyribonuclease I subunit C [Yersinia pestis Pestoides F]
Length = 476
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 195/371 (52%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++ +
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQE 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IPI ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 SAIPIKLVHINKCPVLAPAKTLLPEN-SDRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I++ + L ++ F++ +LE L+F
Sbjct: 350 LFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKIL 354
+RARN+ TL+ E +RW ++R ++ Y + FY + E ++ +L
Sbjct: 410 FRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYED-----DKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|237732065|ref|ZP_04562546.1| exonuclease I [Citrobacter sp. 30_2]
gi|226907604|gb|EEH93522.1| exonuclease I [Citrobacter sp. 30_2]
Length = 474
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 180/328 (54%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A I P +P +++
Sbjct: 174 IEHTNAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTSKADLGDNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N I K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQIRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FADAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW +R F
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLDHRRQVF 434
>gi|432584277|ref|ZP_19820674.1| exodeoxyribonuclease I [Escherichia coli KTE57]
gi|431116079|gb|ELE19540.1| exodeoxyribonuclease I [Escherichia coli KTE57]
Length = 475
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 201/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI- 353
F YRARNF TL E +RW ++R F + + + E++ L ++ + K+
Sbjct: 408 FNYRARNFPGTLDDNEQQRWLEHRRQVFTPEF-----LQGYADELQMLAQQYADDKEKVA 462
Query: 354 -LNALLMYGKSIT 365
L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|329120482|ref|ZP_08249147.1| exodeoxyribonuclease I [Neisseria bacilliformis ATCC BAA-1200]
gi|327461940|gb|EGF08270.1| exodeoxyribonuclease I [Neisseria bacilliformis ATCC BAA-1200]
Length = 521
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 175/323 (54%), Gaps = 9/323 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
F+RN ++PYE ++N SRWDL++V++A + L P GI WP NG P F+LE L+ N
Sbjct: 159 TFYRNFLDPYEYSYQNGNSRWDLLDVVRACHALRPEGIEWPRDENGLPVFRLEQLTAANG 218
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDALSDV AT+ LA+LI+ PRLF F R K + A I P +I+
Sbjct: 219 IEHAHAHDALSDVYATIALAKLIKQKQPRLFRFFFENRGKAPLAAMIDIRRHTPLVHISG 278
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + +L+ P+ HP NKN +I +L D + L + + +R+ L K +
Sbjct: 279 MFGNARRNTALIAPLSWHPSNKNAVIACDLSADLRDLLNLNADTLRERLYTPKETLLAQG 338
Query: 180 ---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+P+ ++H+N+ PI+ VL R D N+ + ++IF
Sbjct: 339 ALPVPLKLVHINKCPILTPR-NVLRDEDAERLGIDNTICQNNLAALQNAPEIRQKVQQIF 397
Query: 237 LDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ + SD N++ ELYN F S D LA LR++ P++L+N F++ ++ +L+F
Sbjct: 398 RETRQFAPSD---NVETELYNGFFSPADKQNLATLRTLPPEQLANHGLPFQDPRIPQLLF 454
Query: 296 LYRARNFIETLSYKELKRWKKYR 318
YRAR+F TL+ E +W+KYR
Sbjct: 455 HYRARHFYPTLTRAEQIQWQKYR 477
>gi|88707066|ref|ZP_01104762.1| exodeoxyribonuclease I [Congregibacter litoralis KT71]
gi|88698716|gb|EAQ95839.1| exodeoxyribonuclease I [Congregibacter litoralis KT71]
Length = 482
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 196/371 (52%), Gaps = 10/371 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY RE+ + SRWDLI+V++ Y L P G+ WP +++G PSF+LE L N L
Sbjct: 112 LYRNLRDPYAREYGDGRSRWDLIDVVRTAYALRPEGLNWPTRDDGLPSFRLEDLCKANGL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+AHDAL DV+AT+ LAR I++ PRLF+++ R K+ V + P+A+P +++ M
Sbjct: 172 EQGQAHDALVDVKATIALARAIKDKQPRLFDWLFRQRFKQAVKPLLD-PMAQPVLHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F ++ + + L+ P+ +H N+N +I +L D + ++ L E
Sbjct: 231 FGARRANLGLILPLAVHYQNRNEVICADLSVDAALIIDLPAEELHRRLYTSNADLGEGEV 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK--CASSILNNTYIWKKIF 236
I +H+NR P+++ K+ + + R DL N++ A + K+
Sbjct: 291 RPGIKSVHINRCPVLLPE-KMADAAVAERSGLDLAVCHGNLQRLRAYDERMPGALRDKLR 349
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+++ + E + D LY FI K+D L + +++P+ L+ FE+ +LEE++F
Sbjct: 350 AVSELSGREPETDPDRMLYSGGFIPKEDRRTLDRVLALTPEDLATTTVAFEDTRLEEMLF 409
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN--EHDTKI 353
YRARN+ ETL+ +E RW++YR +R N+ IE L A + D +
Sbjct: 410 RYRARNYPETLNDEERARWEEYRFARISEGDGRSLNLEDLNGIIEERLIAAQITDRDRHV 469
Query: 354 LNALLMYGKSI 364
L L +G S+
Sbjct: 470 LEELQRWGDSL 480
>gi|197335521|ref|YP_002156294.1| exonuclease I [Vibrio fischeri MJ11]
gi|197317011|gb|ACH66458.1| exodeoxyribonuclease I [Vibrio fischeri MJ11]
Length = 474
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 193/367 (52%), Gaps = 12/367 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN PY W+N SRWDL++V++A Y L P GI WP G+PSFKLE+LS N +
Sbjct: 114 LYRNFFEPYGWSWQNGNSRWDLLDVMRAVYALRPEGINWPKDEEGRPSFKLENLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA+ ++ P++FN++LS+R KK I P +++ M
Sbjct: 174 EHANAHDAMADVIATIELAKKVKEAQPKMFNYLLSMRNKKKAATLIDIVEMTPLMHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F IS + P+ HP N N +IT +L DP FL ++ ++ + K++ D
Sbjct: 234 FGVDRGNISWIVPVAWHPTNNNAVITIDLALDPSVFLKLNVEELHQRMYTKRSDLGPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ K L++ D +N+K I N I +K+
Sbjct: 294 PVPVKLVHLNKCP-VLAPAKTLTAENAANLNVDREACLRNLKV---IRENPEIRQKLIEL 349
Query: 239 YKIN-NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y I N + N+D LY+ F S D + I+R +P++L + + +++ L+F Y
Sbjct: 350 YSIEPNYEKSTNVDTLLYDGFFSHADKATIDIIRQSTPEQLIDFEPNVTDPRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF TL+ E RW + + ++ Y + L +ES + N+ IL A+
Sbjct: 410 RARNFPHTLNEAEQLRWHAH-LQDYFQTHLPDYEASFENLYLES---EGNDKKVAILKAV 465
Query: 358 LMYGKSI 364
Y + +
Sbjct: 466 YNYVQQL 472
>gi|401674947|ref|ZP_10806944.1| exonuclease I [Enterobacter sp. SST3]
gi|400217962|gb|EJO48851.1| exonuclease I [Enterobacter sp. SST3]
Length = 474
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 194/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A Y L P GI WP G SF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGIHWPENEEGLTSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF ++LS R K+ ++ I P +P +I+
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKSAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L KN +
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKNELGDLP 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARN+ TL E +RW ++R + F + + Y + M Y + E N +L
Sbjct: 410 RARNYPGTLDEAEQERWLQHRRNVFTPEYLHSYAQELEMLYGQNE-----GNAEKQALLK 464
Query: 356 ALLMYGKSIT 365
+L Y + I
Sbjct: 465 SLFQYAQEIV 474
>gi|421845733|ref|ZP_16278885.1| exonuclease I [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772874|gb|EKS56457.1| exonuclease I [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455646076|gb|EMF25119.1| exonuclease I [Citrobacter freundii GTC 09479]
Length = 474
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 180/328 (54%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A + P +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALVDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTSKADLGDNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N I K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQIRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FADAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW +R F
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLDHRRQVF 434
>gi|387867230|ref|YP_005698699.1| Exodeoxyribonuclease I [Edwardsiella tarda FL6-60]
gi|304558543|gb|ADM41207.1| Exodeoxyribonuclease I [Edwardsiella tarda FL6-60]
Length = 475
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 189/373 (50%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L GI WP G PSFKLEHLS N
Sbjct: 114 LFYRNFFDPYAYSWQNGNSRWDLLDVVRTCYALRHEGIVWPENEQGLPSFKLEHLSQANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ LA+ ++ PRLF+++ LR K V I P +++
Sbjct: 174 IEHSNAHDAMADVYATIALAKRVKQAQPRLFDYLFQLRNKNRVAQLIDIAAMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP NKN +I +L D L D +R+ L ++ +
Sbjct: 234 MFGALRGNTSLIAPLAWHPENKNAVIVCDLDSDITPLLTLDATALRERLYTPRSELGDAA 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+PI ++H+N+ P++ +L N R D N+ + ++ I K+
Sbjct: 294 PVPIKLVHINKCPVLAPEKTLLVDNAA-RLGLDRQRCRDNLAL---LQQHSEIRDKVVSL 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D SD ++D +LY+ F S D + I+R+ P+ L ++ F + ++ L+
Sbjct: 350 FADAPPFPPSD---DVDSQLYDGFFSDADRQAMQIIRATQPQNLPALDLRFSDPRITPLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKK--NNLYNINMFYLEIESLLKKANEHDTK 352
F YRARN+ TL E +RW+++R + ++ + L + M Y E +K
Sbjct: 407 FRYRARNYPATLDENERRRWQQHRQAMLTPQRVQDYLQTLEMLYNRYEDQPQK-----LT 461
Query: 353 ILNALLMYGKSIT 365
+L AL Y + +
Sbjct: 462 LLRALFDYARELV 474
>gi|269138522|ref|YP_003295222.1| exonuclease I [Edwardsiella tarda EIB202]
gi|267984182|gb|ACY84011.1| exonuclease I [Edwardsiella tarda EIB202]
Length = 477
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 189/372 (50%), Gaps = 20/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L GI WP G PSFKLEHLS N
Sbjct: 116 LFYRNFFDPYAYSWQNGNSRWDLLDVVRTCYALRHEGIVWPENEQGLPSFKLEHLSQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ LA+ ++ PRLF+++ LR K V I P +++
Sbjct: 176 IEHSNAHDAMADVYATIALAKRVKQAQPRLFDYLFQLRNKNRVAQLIDIAAMTPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP NKN +I +L D L D +R+ L ++ +
Sbjct: 236 MFGALRGNTSLIAPLAWHPENKNAVIVCDLDSDITPLLTLDATALRERLYTPRSELGDAA 295
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+PI ++H+N+ P++ +L N R D N+ + ++ I K+
Sbjct: 296 PVPIKLVHINKCPVLAPEKTLLVDNAA-RLGLDRQRCRDNLAL---LQQHSEIRDKVVSL 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D SD ++D +LY+ F S D + I+R+ P+ L ++ F + ++ L+
Sbjct: 352 FADAPPFPPSD---DVDSQLYDGFFSDADRQAMQIIRATQPQNLPALDLRFSDPRITPLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKK--NNLYNINMFYLEIESLLKKANEHDTK 352
F YRARN+ TL E +RW+++R + ++ + L + M Y E +K
Sbjct: 409 FRYRARNYPATLDENERRRWQQHRQAMLTPQRVQDYLQTLEMLYNRYEDQPQK-----LT 463
Query: 353 ILNALLMYGKSI 364
+L AL Y + +
Sbjct: 464 LLRALFDYAREL 475
>gi|238793487|ref|ZP_04637112.1| Exodeoxyribonuclease I [Yersinia intermedia ATCC 29909]
gi|238727260|gb|EEQ18789.1| Exodeoxyribonuclease I [Yersinia intermedia ATCC 29909]
Length = 476
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 191/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK---NSFK 177
MF + S + P+ HP NKN +I +L D L D + +R+ L ++ N+
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLALDSDTLRERLYTRRDKLNTQD 293
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ P+ L ++ F++ +LE L F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEPQNLPALDLTFQDPRLETLFFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW +R N + + L++E + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLAHRREAL-----NPERVQDYVLQLEQFYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFEYARGLV 475
>gi|416072162|ref|ZP_11584096.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347998032|gb|EGY38978.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 474
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFCLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 233 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N R D KN + + IF
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMDIF- 350
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 351 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 409
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 410 RARHFYRTLNRAEQIKWQKY 429
>gi|416046480|ref|ZP_11575727.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347994636|gb|EGY35897.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 475
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++R+ L KK +
Sbjct: 234 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGA 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PI +L N R D KN + + IF
Sbjct: 294 LPVPLKLIHINKCPIFAPAKTLLPQNAE-RLGIDQELCAKNRQRLQEARDIRQKVMDIF- 351
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D N++ +LYN F S D +AILRS+ P+KL+ N F++ ++ EL+F Y
Sbjct: 352 -HQEREFDASDNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHY 410
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 411 RARHFYRTLNRAEQIKWQKY 430
>gi|311278993|ref|YP_003941224.1| Exodeoxyribonuclease I [Enterobacter cloacae SCF1]
gi|308748188|gb|ADO47940.1| Exodeoxyribonuclease I [Enterobacter cloacae SCF1]
Length = 474
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 194/369 (52%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNHNSRWDLLDVMRACYALRPEGINWPENEDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ + R K + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKSRQPRLFDYLYTYRNKNKLATLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L +++RD L K S +
Sbjct: 234 MFGAWRGNTSWIAPLAWHPDNRNAVIVVDLAGDMSPLLELTADELRDRLYTAKASLGDLA 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R + N+K + +N + K+
Sbjct: 294 AVPVKLVHLNKCP-VLAQANTLRPEDADRLGINRQQCLDNLKL---LRDNPQVRDKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + IL P+ L ++ F + ++E+L+F Y
Sbjct: 350 FADAAPFVPSQNVDAQLYNGFFSDADRAAMKILLETEPRNLPALDLTFADTRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILN 355
RARNF TL E +RW ++R F + + + E++ L ++ E K +L
Sbjct: 410 RARNFPGTLDDAEQQRWLQHRREVFTPEF-----LQAYADELQLLSQQYAEDKAKLALLK 464
Query: 356 ALLMYGKSI 364
L Y + I
Sbjct: 465 TLWQYAQDI 473
>gi|260598502|ref|YP_003211073.1| exonuclease I [Cronobacter turicensis z3032]
gi|260217679|emb|CBA32024.1| Exodeoxyribonuclease I [Cronobacter turicensis z3032]
Length = 480
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 197/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 119 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 178
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + + +P +++
Sbjct: 179 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLVDIVQMKPLVHVSG 238
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + PI HP N+N +I +L D L + + +R+ L K + +
Sbjct: 239 MFGAWRGNTSWIAPIAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALNDAS 298
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK-IFL 237
+P+ ++HLN+ P V++ L R D N+K + ++ + +K + L
Sbjct: 299 PVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQRCLDNLKV---LRDSPQVREKLVAL 354
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY+ F S D + I+ P+ L ++ F +K++ +L+F Y
Sbjct: 355 FAEAPPFPPTDNVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIGKLLFNY 414
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 415 RARNFPGTLSEQEQERWLAHRRDVFTPEFLQTYAQELEMLYNQYES-----DKEKTALLK 469
Query: 356 ALLMYGKSI 364
AL Y + I
Sbjct: 470 ALYQYAQEI 478
>gi|407699786|ref|YP_006824573.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Black Sea 11']
gi|407248933|gb|AFT78118.1| exodeoxyribonuclease I [Alteromonas macleodii str. 'Black Sea 11']
Length = 476
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 198/371 (53%), Gaps = 11/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I++ +A Y L P GI WP + +G PSFKLE L+ NN
Sbjct: 110 LFYRNFYDPYSREWRNGNSRWDIIDLARACYALRPEGINWPRREDGAPSFKLEALTAANN 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDALSDV AT+ LA+LI+ PRLF++ LSLR K V+ +I +I+
Sbjct: 170 IGHDNAHDALSDVYATIALAKLIKEKQPRLFDYALSLRSKHTVMQQIDTSKPSVLLHISS 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
+ + + P+ HP N N I +L H+ + + +IR L ++F
Sbjct: 230 KLPASQGCCTWVMPVAKHPTNNNAFIAVDLSHNIDSLVNDTPEEIRTALYAPSDTFDDVA 289
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
E + +IH+NRSP I+ + ++ + R + N K +S+ +F
Sbjct: 290 ERPGLKLIHVNRSPF-ITTARAMTEDNAERLGLNRERCLNNYKALASLPELASKLVSVF- 347
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
D +I +S E +ID LY F++ +D + + P L+ + +++ L++ +F
Sbjct: 348 DEEIQSS--EQDIDHALYSGGFLNDEDRRWCESVINAQPDDLATLGDKTQHEGLKKQLFR 405
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKK-NNLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF TL+ E+ RW+ +R +R + + + + + +ESL + +++ K I
Sbjct: 406 YRARNFPNTLTADEMTRWQYHRQARLTDPAFHGSITLETYMMRLESLAHEHSDNPEKQAI 465
Query: 354 LNALLMYGKSI 364
L AL Y +++
Sbjct: 466 LRALYQYAENL 476
>gi|90022039|ref|YP_527866.1| exonuclease I [Saccharophagus degradans 2-40]
gi|89951639|gb|ABD81654.1| Exodeoxyribonuclease I subunit C [Saccharophagus degradans 2-40]
Length = 485
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 197/382 (51%), Gaps = 23/382 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++ Y L P GI WP + GKPSF+LE+L+ VN +
Sbjct: 110 LYRNYFDPYEREWRNGNSRWDIIDMVRLCYALRPEGIEWPVVD-GKPSFRLENLTKVNGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA SDV AT+ LARL+R P L+ +++ R K+ + +P +I+
Sbjct: 169 VHASAHDAYSDVEATIKLARLVREKQPALYEHVVNNRGKREATKLLDVASKKPMLHISSK 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
FSS++ L+ P+ HP+NKN +I NL DPK ++IR + E +
Sbjct: 229 FSSENGCAGLIAPLAYHPVNKNAVIVINLNADPKPLFDLSADEIRARIFTATKDLPEGVE 288
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCAS--SILNNTYIWKKIF 236
P+ +IHLN+ PI+++ K+L R D +C S L I +K+
Sbjct: 289 RLPVKLIHLNKCPILLTP-KILDEQAQARLGID------KAQCEKHWSQLQRMDITEKLQ 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N + L+ + LY+ F+ D +A +R + +LS NF F +K+L +++
Sbjct: 342 QVFATNEFEGSLDPERMLYDGFVGDTDKYVMADVRKANGAELSKHNFVFSDKRLNDMLLR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMF-------YLEIESLLKKANEH 349
Y+ARNF + L+ E W+++ R + + + +++ E+E ++ E
Sbjct: 402 YKARNFPDDLTDSERAEWREFVSQRLKDGGDGVLSLSELNDKLVNIRAELEQQQDQSPEQ 461
Query: 350 DTK---ILNALLMYGKSITQKI 368
K I+ AL Y +Q I
Sbjct: 462 IAKKLDIIKALEQYVSKQSQLI 483
>gi|254491492|ref|ZP_05104671.1| Exonuclease C-terminal domain family [Methylophaga thiooxidans
DMS010]
gi|224462970|gb|EEF79240.1| Exonuclease C-terminal domain family [Methylophaga thiooxydans
DMS010]
Length = 479
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 195/373 (52%), Gaps = 10/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW++ SRWD+I++++ L P GI WP + +GKPSF+LE L+ N +
Sbjct: 109 LFRNFYDAYAREWQSGNSRWDIIDMVRLTRALRPEGIHWPNREDGKPSFRLEDLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDAL+DV AT+ +ARLI+N P+L++++ R+K+ + + +P +++ M
Sbjct: 169 EHSGAHDALADVYATIEMARLIKNAQPKLYDYVFERRRKQTLAPLLNLNERKPVVHVSRM 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ ++ +L+ P+ P N N +I ++L HDPK + D +R+ L E
Sbjct: 229 YPGEYCGTALVVPLAKDPNNNNGIIVYDLRHDPKDLIELDAETLRERLFTPTADLPEGAT 288
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ +H+N+ P+V+ L R + D ++++ ++ T IF
Sbjct: 289 RPALKTLHINKCPVVVPE-NTLDDAAAERLQIDRTAHYQHLDMLNTAQGLTEKLNAIFTA 347
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ D + D LY F S D K+ ++R+ P L ++ FE+ +L EL+F Y
Sbjct: 348 PTYDEID---DPDASLYGGGFFSDNDKRKMDVIRNADPAMLPTLSVPFEDPRLPELLFRY 404
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNK-KNNLYNINMFYLEI-ESLLKKANEHDTKILN 355
RARN+ E+L+ +E ++W YR R N+ + + N+ F + ES + NE +L
Sbjct: 405 RARNWPESLNQEEQEQWVLYRQHRLGNQAADKVLNVERFETALAESRQQDLNEEQKAVLE 464
Query: 356 ALLMYGKSITQKI 368
L Y + + ++
Sbjct: 465 QLEQYAQRLKTEL 477
>gi|395231646|ref|ZP_10409932.1| exonuclease I [Citrobacter sp. A1]
gi|424730476|ref|ZP_18159072.1| exodeoxyribonuclease i [Citrobacter sp. L17]
gi|394714632|gb|EJF20548.1| exonuclease I [Citrobacter sp. A1]
gi|422895046|gb|EKU34836.1| exodeoxyribonuclease i [Citrobacter sp. L17]
Length = 474
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 180/328 (54%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF ++ S R K ++A I P +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKSRQPRLFEYLYSHRNKHKLVALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTSKADLGDNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N I K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCRDNLKV---LRENPQIRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FADAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW +R F
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLDHRRQVF 434
>gi|53803521|ref|YP_114798.1| exonuclease I [Methylococcus capsulatus str. Bath]
gi|53757282|gb|AAU91573.1| exodeoxyribonuclease I [Methylococcus capsulatus str. Bath]
Length = 478
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 191/374 (51%), Gaps = 18/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RNL +PY REWK SRWD+I++ + L P GI WP + G P FKLE L+ N +
Sbjct: 112 FYRNLYDPYAREWKGGNSRWDVIDLARLTQALRPDGIEWPRDSLGSPVFKLERLAAANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYV---LAEIGWPIARPFFYI 118
H+ AHDALSDVRAT+ ARLI PRLF F L R K V LA W +P ++
Sbjct: 172 RHESAHDALSDVRATVAFARLIAERQPRLFQFALESRAKGAVERLLALGAW---QPVLHV 228
Query: 119 THMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
+ FS+ I+ + P+C HP +I ++L DP + +++IR L
Sbjct: 229 SEKFSASRHCIACVLPLCRHPRIATRVIVFDLASDPAQLSDLSVDEIRRRLFTPSAELPA 288
Query: 179 D---IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI 235
+P+ +H NR P+V+ + L R D + + + I KI
Sbjct: 289 ATGRLPLKGVHTNRCPVVVP-MSALRPADGERLGIDAVLCRRRARWLQDHAED--IIPKI 345
Query: 236 FLDYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
++++ S E D EL FI D L + ++P +L++ F + + +E
Sbjct: 346 SAAFEVDAS-FEAASDPELMLYRGGFIPDADRRALDQVHRLTPDQLAHYRPRFVDGRFDE 404
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK 352
L+F +RARNF ETL+ +E +RW +R +R L ++ F+ I+ L + ++ +
Sbjct: 405 LLFRFRARNFPETLNAEERERWTAFRRARLAGIGGGL-SLAEFFSRIDRLRSQESDAGKR 463
Query: 353 -ILNALLMYGKSIT 365
IL+AL +YG++++
Sbjct: 464 AILDALEVYGRNLS 477
>gi|170682338|ref|YP_001743128.1| exonuclease I [Escherichia coli SMS-3-5]
gi|301019172|ref|ZP_07183372.1| exonuclease [Escherichia coli MS 69-1]
gi|419920831|ref|ZP_14438936.1| exonuclease I [Escherichia coli KD2]
gi|170520056|gb|ACB18234.1| exodeoxyribonuclease I [Escherichia coli SMS-3-5]
gi|300399365|gb|EFJ82903.1| exonuclease [Escherichia coli MS 69-1]
gi|388383691|gb|EIL45441.1| exonuclease I [Escherichia coli KD2]
Length = 475
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R N+K + N + K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDAERLGIARQHCLDNLKV---LRENPQVRDKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 351 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESL--LKKANEHDTK 352
F YRARNF TL E +RW ++R F + + + EI+ L L ++
Sbjct: 408 FNYRARNFPGTLDDNEQQRWLEHRRQVFTPEF-----LQGYAEEIQMLAQLYADDKEKVA 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALWQYAEEIV 475
>gi|419845085|ref|ZP_14368372.1| exodeoxyribonuclease I [Haemophilus parainfluenzae HK2019]
gi|386417011|gb|EIJ31503.1| exodeoxyribonuclease I [Haemophilus parainfluenzae HK2019]
Length = 473
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 175/322 (54%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF F R KK + I +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQFFFVHRGKKEIEKLIDTAEMTALVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + P+ HP N+N +I +L D + +R L KK+ +E
Sbjct: 232 LGNYRGNCVWVAPLAWHPTNQNAVIVCDLSGDIDNLISKSAVDLRQDLYTKKSELEERGV 291
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D N+ L+ +IF
Sbjct: 292 SSVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRQHCLDNLAKLRQSLDIREKVIEIFS 350
Query: 238 DYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + SD N++ ELYN F S D +AILR + P+KL+ FE+K++ EL+F
Sbjct: 351 EEREFEPSD---NVETELYNGFFSNADKNNMAILRDLPPEKLAEHGLAFEDKRIPELLFH 407
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRAR+F +TL+ E +W+KYR
Sbjct: 408 YRARHFYKTLNRAEQIKWQKYR 429
>gi|359783060|ref|ZP_09286277.1| exonuclease I [Pseudomonas psychrotolerans L19]
gi|359368948|gb|EHK69522.1| exonuclease I [Pseudomonas psychrotolerans L19]
Length = 481
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 198/374 (52%), Gaps = 14/374 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWD++ +++A Y P + WP ++ + S +L+ L+ N +
Sbjct: 110 LYRNFHDPYAREWQQGNSRWDVLGLVRALYAFRPESLDWP-QDEQRVSLRLDRLTVANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDAL+DVRATL LARL+R PRL++++ + R+KK LA I + P +++
Sbjct: 169 EHAQAHDALADVRATLALARLVRQRQPRLYDYLWTQRQKKAALARIR--LLEPLLHVSGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS++ +++ + P+ HP+N+N LI +L P+ L D+ +R+ L ++++ E
Sbjct: 227 FSAERHFLAPVLPLAWHPVNRNALIVCDLGLAPEPLLDLDVETLRERLYTRRDALAEGDL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++ +N+ PI ++ VL R +FDL ++ ++ +L+ W+
Sbjct: 287 PVPLKLVQINKCPI-LAPFSVLRPADTERLQFDLAAVWRRVR---QLLDQRATWQPKVQA 342
Query: 239 YKINNSDL---ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
S L E + LY+ FI+ ++ + ++L + + F +++ EL F
Sbjct: 343 LYAEASGLAAQEQEAEARLYDGFIAAEERQLCDQVHQCPAEQLGSRAWPFRDERHPELFF 402
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTKIL 354
YRARNF E L+ +E RW+++ R ++ + F E L ++ IL
Sbjct: 403 RYRARNFPELLTAEEEARWRQFCRQRLLGEEQQGHMTCTQFLTLTEQLRREVPVDQVPIL 462
Query: 355 NALLMYGKSITQKI 368
A + +++ Q++
Sbjct: 463 EAWSAHVRAVMQRL 476
>gi|416051639|ref|ZP_11577687.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347993072|gb|EGY34449.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 475
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 172/320 (53%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 VHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L + L ++R+ L KK +
Sbjct: 234 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTANIDDLLTKSAEELRENLYTKKETLLAAGT 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ +IH+N+ PIV +L N D +N + + IF
Sbjct: 294 LPVPLKLIHINKCPIVAPAKTLLPQNAEC-LGIDQELCARNRQRLQEARDIRQKVMNIF- 351
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
++ D+ N++ ELYN F S D +AILR + P+KL+ N F++ ++ EL+F Y
Sbjct: 352 -HQEREFDVSDNVETELYNGFFSDADKNNMAILRILEPEKLAEHNLSFQDPRIPELLFHY 410
Query: 298 RARNFIETLSYKELKRWKKY 317
RAR+F TL+ E +W+KY
Sbjct: 411 RARHFYHTLNRAEQIKWQKY 430
>gi|244539165|dbj|BAH83208.1| exonuclease I [Candidatus Ishikawaella capsulata Mpkobe]
Length = 479
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 182/326 (55%), Gaps = 6/326 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY WKNN SRWDL+NV++ Y L P GI WP + NG PSF+LEHL+ N
Sbjct: 119 IFYRNFYDPYAWTWKNNNSRWDLLNVMRTCYALRPNGIIWPKRENGLPSFRLEHLTKANG 178
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H KAHDA+SDV AT+ LA+L++ P LF+F+ + R+K+ + I P +P Y+++
Sbjct: 179 ITHNKAHDAISDVHATVELAKLVKKKQPNLFDFLFNHRQKQQLRMLIDLPHMQPLVYVSN 238
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
S+ SL+ PIC HP N N LI +L D L DI +R + +K + F E I
Sbjct: 239 TISTLQRNTSLVAPICWHPHNFNYLIIIDLTKDVSVLLDIDIKTLRKNI-YKSSLFNEII 297
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF-LDY 239
P +I+LN+ PI ++ L R D N+ N I KI +
Sbjct: 298 PTQVINLNKCPI-LAPANTLRIEDTIRLNIDRQQCIDNLLLLRKSPN---IRNKILEIHS 353
Query: 240 KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
+ L N+D +LY F + D + + I+ P L +N F +K+L++L+F YRA
Sbjct: 354 QFKPKILSNNVDTQLYKGFFNNFDQVNMKIIHKTEPINLRLLNIQFNDKRLDKLLFRYRA 413
Query: 300 RNFIETLSYKELKRWKKYRISRFYNK 325
RNF +TLS KE K W +++ F+ K
Sbjct: 414 RNFPKTLSNKEKKLWFQHKKKIFHPK 439
>gi|238757180|ref|ZP_04618367.1| Exodeoxyribonuclease I [Yersinia aldovae ATCC 35236]
gi|238704558|gb|EEP97088.1| Exodeoxyribonuclease I [Yersinia aldovae ATCC 35236]
Length = 476
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 190/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDIADMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D N +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSNTLRERLYTRRDKLGAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ PK L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEPKNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW ++R N + + L++E + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRREAL-----NAEKVQAYMLQLEQFYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|429103963|ref|ZP_19165937.1| Exodeoxyribonuclease I [Cronobacter turicensis 564]
gi|426290612|emb|CCJ92050.1| Exodeoxyribonuclease I [Cronobacter turicensis 564]
Length = 491
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 197/369 (53%), Gaps = 14/369 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 130 IFYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGIVWPENSDGLPSFRLEHLTVANG 189
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PR+F+++ + R K+ + + +P +++
Sbjct: 190 IEHANAHDAMADVYATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLVDIVQMKPLVHVSG 249
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + PI HP N+N +I +L D L + + +R+ L K + +
Sbjct: 250 MFGAWRGNTSWIAPIAWHPDNRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALNDAS 309
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK-IFL 237
+P+ ++HLN+ P V++ L R D N+K + ++ + +K + L
Sbjct: 310 PVPVKLVHLNKCP-VLAQANTLRPEDAERLGIDRQRCLDNLKV---LRDSPQVREKLVAL 365
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY+ F S D + I+ P+ L ++ F +K++ +L+F Y
Sbjct: 366 FAEAPPFPPTDNVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIGKLLFNY 425
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILN 355
RARNF TLS +E +RW +R F + Y + M Y + ES ++ T +L
Sbjct: 426 RARNFPGTLSEQEQERWLAHRRDVFTPEFLQTYAQELEMLYNQYES-----DKEKTALLK 480
Query: 356 ALLMYGKSI 364
AL Y + +
Sbjct: 481 ALYQYAQEM 489
>gi|339489177|ref|YP_004703705.1| exonuclease I [Pseudomonas putida S16]
gi|338840020|gb|AEJ14825.1| exonuclease I [Pseudomonas putida S16]
Length = 477
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 194/372 (52%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPDGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIS--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHEELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++ +NR P V++ L VL R DL + W+ L+
Sbjct: 287 PVPLKLVQINRCP-VLAPLSVLRPADQQRLGLDLTLLQLR---GEELAEQQAQWQDK-LE 341
Query: 239 YKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ D + D E LY+ F+ +D +R++ P +LS + F++ +L EL+F
Sbjct: 342 HIYGKEDFAPSEDPEQQLYDGFLGDRDRRLCEQVRALEPAQLSRGQWMFDDPRLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF ETLS +E +RW + R + + N + F + + A++ ++L+
Sbjct: 402 YRARNFPETLSGEERQRWFSFCQQRLSDPQWGAPNTLGDFEQARQQAWEGADDAGRRVLD 461
Query: 356 ALLMYGKSITQK 367
A ++ + + +
Sbjct: 462 AWQVHARQLQAQ 473
>gi|348029126|ref|YP_004871812.1| exodeoxyribonuclease I [Glaciecola nitratireducens FR1064]
gi|347946469|gb|AEP29819.1| exodeoxyribonuclease I [Glaciecola nitratireducens FR1064]
Length = 521
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 192/369 (52%), Gaps = 18/369 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PYEREWKN SRWD+I++ +A Y L P GI WP +GKPSFKLE L+ N +
Sbjct: 156 YRNFYDPYEREWKNGNSRWDIIDLARACYALRPEGIEWPIHEDGKPSFKLEELTAANGID 215
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA+SDV+AT+ A+L++ P+LF++ SLR K V+ I +PF +I+ M
Sbjct: 216 HESAHDAVSDVKATIAFAQLMKAKQPKLFDYYFSLRNKNTVMQNIDVANQKPFLHISGML 275
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP- 181
+ S PI +HP NKN +I +L D D + ++ L K++ D+P
Sbjct: 276 PATQGCCSWFMPIAMHPSNKNAVICVDLASDLSSIESMDSDDLKALLYTKQD----DLPL 331
Query: 182 ------ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI 235
I ++H+N+SP V + K L+ R + KN I++ T I
Sbjct: 332 GTKKPGIKLVHINKSPFV-APAKTLTPEHAVRLNISRDDCLKNHAYIKRIIDITDKLSAI 390
Query: 236 FLDYKINNSDLELNIDEELYN-NFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + ++ E +ID LY F S D + +++ P++L+ N + E +
Sbjct: 391 FEEDGRQHT--ETDIDASLYTRGFASAADKHWMTEVKACPPEQLTVWQDRAPNLQYAEQL 448
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLKKANEHD--T 351
YRARNF TL EL +W+ +R +RF + K +I+ ++ L +K E
Sbjct: 449 MRYRARNFPHTLDQSELDKWQAHRKARFTADNKKTCLSISECQAQVAELAEKHAEDGKKM 508
Query: 352 KILNALLMY 360
K+L+ + +Y
Sbjct: 509 KLLSTITLY 517
>gi|302339540|ref|YP_003804746.1| exodeoxyribonuclease I [Spirochaeta smaragdinae DSM 11293]
gi|301636725|gb|ADK82152.1| Exodeoxyribonuclease I [Spirochaeta smaragdinae DSM 11293]
Length = 484
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 188/341 (55%), Gaps = 12/341 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL++P+ REW SRWDL++V++A L P GITWP NG+P+F+LE L+ N L
Sbjct: 110 LYRNLMDPFRREWAGGNSRWDLLDVLRAARDLRPQGITWPEGENGRPTFRLEKLTEANAL 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDVRAT+ +ARL+R P++F+++ R K + I RPF + + M
Sbjct: 170 PHQNAHDALSDVRATIAMARLLREKQPKIFSYLYRGRIKDHARQLIDLHKRRPFLHTSAM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKN---SFKE 178
S+++ Y S++ P+ HP N+N ++ ++L DP+ + ++++R L F + S +E
Sbjct: 230 LSNEYGYTSILAPVAPHPANQNAILCFDLRQDPEPLIERSVDELR-RLIFAPSEELSLEE 288
Query: 179 D-IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWKKIF 236
I + IH+NRSP V++ L L + R D+ C + K A + L + +KI
Sbjct: 289 SRIRLIPIHINRSP-VLAPLSTLDPDTAKRLGLDVTLCGKRAAKLAEASL----LTQKIM 343
Query: 237 LDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
++ + +++ + + E+Y F S D ++ R +SP+ + F +++L EL +
Sbjct: 344 EVFRRDEAEIRRDPELEIYSGGFFSDADRQRMERFRELSPEAMLKRRGDFYDRRLPELAW 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFY 336
+ RN E L E K+WK + R L N F+
Sbjct: 404 RFVCRNHSEILDENERKKWKSFCAGRLLFPPERLINDFAFF 444
>gi|345870462|ref|ZP_08822414.1| Exodeoxyribonuclease I [Thiorhodococcus drewsii AZ1]
gi|343921665|gb|EGV32378.1| Exodeoxyribonuclease I [Thiorhodococcus drewsii AZ1]
Length = 491
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 190/332 (57%), Gaps = 9/332 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL +PY REW+N SRWDLI+V++ + L P GI WP +G SFKLE L+ N
Sbjct: 121 LFYRNLYDPYAREWQNGNSRWDLIDVLRLAHALRPDGIDWPLHEDGSVSFKLEQLTEANG 180
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+G+ARL+R P+LF++ L+LR K+ V +G +P + +
Sbjct: 181 IPHVGAHDALADVRATIGMARLLRRVQPKLFDYGLTLRDKRRVREMLG--KRQPLLHASA 238
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + I+ ++P+ P N N +I ++L DP++ L + IR L E
Sbjct: 239 RYPAALGCIAPVFPLASRPGNANGVIAFDLRADPRQLLDLSEDAIRRRLFTPVAELPEGV 298
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ IH+NRSP+ ++ +K LSS+ R+ D + + + + + T I K+
Sbjct: 299 DRVPLKTIHVNRSPM-LAPMKTLSSDAAERWGIDPHLVAERSRFL--VEHATEIQAKVEA 355
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ + + D +Y F+S +D L LR+++P +L+ + FE+ +L E++F
Sbjct: 356 VHRPPEASDMRDPDLMIYSGGFLSDRDRRSLDRLRALTPSELAEESPRFEDGRLREMLFR 415
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
YRARN+ ETLS +E + W YR++R +
Sbjct: 416 YRARNWPETLSPEETEDWDAYRLARLTDPDAG 447
>gi|294635527|ref|ZP_06714007.1| exodeoxyribonuclease I [Edwardsiella tarda ATCC 23685]
gi|451964338|ref|ZP_21917604.1| exodeoxyribonuclease I [Edwardsiella tarda NBRC 105688]
gi|291091096|gb|EFE23657.1| exodeoxyribonuclease I [Edwardsiella tarda ATCC 23685]
gi|451316861|dbj|GAC62966.1| exodeoxyribonuclease I [Edwardsiella tarda NBRC 105688]
Length = 473
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 189/374 (50%), Gaps = 22/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++ Y L P GI WP G PSFKLEHLS N
Sbjct: 112 LFYRNFFDPYAYSWQNGNSRWDLLDVLRTCYALRPQGIVWPENEQGLPSFKLEHLSQANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+ + PRLF+++ LR K V I P +++
Sbjct: 172 IEHSNAHDAMADVYATIEMAKRAKQAQPRLFDYLFQLRNKNRVAQLIDIAEMTPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + SL+ P+ HP NKN +I +L D L D +R+ L ++ +
Sbjct: 232 MFGALRGNTSLVAPLAWHPDNKNAVIVCDLAGDITPLLTLDSETLRERLYTPRSELGDAA 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+PI ++H+N+ P++ +L+ N R D N+ + + ++ + K+
Sbjct: 292 PVPIKLVHINKCPVLAPEKTLLAENAE-RLGLDRQRCLDNL---AQLRHHHAVRDKVVSL 347
Query: 236 FLDYK--INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
F D SD +D +LY+ F S D + I+R+ P+ L ++ F ++++ L
Sbjct: 348 FADAPPFPRASD----VDSQLYDGFFSDADRQAMQIIRATQPQNLPALDLRFNDERITPL 403
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDT 351
+F YRARN+ TL E +RW+++R ++ Y + M Y E ++
Sbjct: 404 LFRYRARNYPATLDEAERQRWQQHRREMLTAERVQEYLQTLEMLYNRYEDQPQR-----L 458
Query: 352 KILNALLMYGKSIT 365
+L AL Y + +
Sbjct: 459 TLLRALFDYARELV 472
>gi|330446032|ref|ZP_08309684.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490223|dbj|GAA04181.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 473
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 192/364 (52%), Gaps = 14/364 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL+++++ Y L P G+ WP + +PSFKLE LS N +
Sbjct: 114 LYRNFFDPYGWAWQNGNSRWDLLDIMRTCYALRPDGLNWPLDDEDRPSFKLEKLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ LA++++ N P+LF+++ LR K+ + + P +I+ M
Sbjct: 174 EHANAHDAMADVYATIELAKIVKTNQPKLFDYLFDLRHKRKLQDLVDIVNLTPLVHISGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +IT NL DP + D +++R+ L K+ D
Sbjct: 234 FGTDCGNTSWIVPLAWHPDNKNAVITVNLALDPTPLIELDADQLRERLYTKRIDLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI +HLN+ P V++ K L + R D K++ + I + I +K+
Sbjct: 294 PVPIKEVHLNKCP-VLAPAKTLKAEDAARLGIDREQCLKHL---ALIKQHPEIREKVLEM 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + D N+D LY+ F S D + I+R +L ++ ++K+++ L+F Y
Sbjct: 350 FSVKREYDANDNVDAMLYDGFFSTADRSTMDIIRETPADQLGSLEINVDDKRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF-YNKKNNLYNINMFYLEIESLLKKANEHDTKILNA 356
RARNF TLSY+E RWK + F N + N E ES +E+ KIL +
Sbjct: 410 RARNFPMTLSYEEQVRWKHHCQDFFEANMPKYMENFEAVAYEYES-----DENKMKILKS 464
Query: 357 LLMY 360
L Y
Sbjct: 465 LYDY 468
>gi|89095382|ref|ZP_01168297.1| exodeoxyribonuclease I [Neptuniibacter caesariensis]
gi|89080350|gb|EAR59607.1| exodeoxyribonuclease I [Oceanospirillum sp. MED92]
Length = 488
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 198/369 (53%), Gaps = 10/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N CSRWD+I++++ L P GI WP +G PS +LE L+ N +
Sbjct: 113 LYRNFFDPYAREWQNGCSRWDIIDMLRLTRTLRPEGIVWPKYEDGTPSLRLEDLTVANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ +A+L+R P+LFN++L+ R K+ + + + +P +I+
Sbjct: 173 DHGHAHDALSDVYATIEMAKLVREKQPKLFNYVLNNRSKQSIQSLLDTQSFKPVLHISSR 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
++ ++ +++ PI HP+NKN +I W+L +P+ + ++R L + + P
Sbjct: 233 YAIEYGNTAVVAPIATHPVNKNGVIVWDLRFNPEPLMQLSAEELRQLLYTPRAELDDSDP 292
Query: 182 ---ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ +H+N+ PI I+ ++SS R + + + +++ S T +K+
Sbjct: 293 RIALKQVHINKCPI-IAPAGMISSEEAARLQINGDQCRAHLQMLRSY---TGFREKLADI 348
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + D + + D+ LY F + D + +R P +L+ ++ F++ +LEE++ Y
Sbjct: 349 YSESPFDTDSDPDQMLYSGGFFTPSDRQLMDQVRESGPDQLAELDLPFQDPRLEEMLLRY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA--NEHDTKILN 355
+ARN L++++ +W+ YR + + + FY + L +A +E IL
Sbjct: 409 KARNCPHVLNHEDQMQWETYRQRKLLKGEGGHLTMEKFYQRLNELYAEAETDEKRKHILE 468
Query: 356 ALLMYGKSI 364
L +Y ++I
Sbjct: 469 ELAVYAEAI 477
>gi|284007268|emb|CBA72582.1| exodeoxyribonuclease I [Arsenophonus nasoniae]
Length = 474
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 191/370 (51%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP + G PSFKLEHL+ VN
Sbjct: 113 IFYRNFYDPYAYSWQQGNSRWDLLDVLRACYALRPDGINWPSNDEGLPSFKLEHLTVVNG 172
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA +DV AT+ +A+LI+ P++F++ LR K V I P +++
Sbjct: 173 IEHANAHDATADVLATIEMAKLIKQAQPKMFDYFFRLRNKNEVKQLIDIIAMTPLVHVSG 232
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + SL+ P+ HP N+N +I +L D L D + +R L K+ +
Sbjct: 233 MFGAIRANTSLIAPLAWHPENRNAIIACDLAADISPLLTLDSDTLRQRLYTPKDELAGEL 292
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF-L 237
IPI +IH+N+ PI ++ L + R DL+ N+ + + ++ + K+ L
Sbjct: 293 AIPIKLIHINKCPI-LAPANTLRTADAQRIALDLDVCQNNL---AILRQHSEVRDKVIRL 348
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ ++D LY+ F D +AI+R P+ L ++ F++ ++ +L F Y
Sbjct: 349 FTEAQPFPAATDVDAMLYSGFFGDNDRSTMAIIRQTLPQNLPALDLKFDDPRMRQLFFRY 408
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARN+ TL+ +E W +R R +K I+ + IE L + E+ K L
Sbjct: 409 RARNYPATLTEQEQLAWLHHRRDRLTCEK-----ISQYLQTIEQLFAEHQENKEKCQQLK 463
Query: 356 ALLMYGKSIT 365
AL+ Y I
Sbjct: 464 ALVDYANQIA 473
>gi|385788735|ref|YP_005819844.1| exonuclease I [Erwinia sp. Ejp617]
gi|310768007|gb|ADP12957.1| exonuclease I [Erwinia sp. Ejp617]
Length = 475
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++V++A Y L P GITWP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAWSWQHGNSRWDLLDVMRACYALRPDGITWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+ ++ PRL++F+ S R K+ + I P +P +I+
Sbjct: 174 VAHENAHDAMSDVYATIAMAKRVKEKQPRLYDFLFSHRNKQKISTLIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + S + P+ HP N+N LIT +L D L D + +R L ++
Sbjct: 234 MFGAARGNTSWIAPLAWHPDNRNALITCDLDGDMAPLLELDADALRARLYTRREELDGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+P+ ++H+N+ P V++ L + R D N+ + + + + +K+
Sbjct: 294 PVPLKLVHINKCP-VVAPANTLRAEDAERIGIDRQRCLDNL---ALLRQHPEVREKVVTL 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD ++D +LYN F S D + I+R + + L ++ F + ++E+L+
Sbjct: 350 FADAQPFTPSD---DVDAQLYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F +RARNF TL E +RW ++R N + + E+E L + + +
Sbjct: 407 FRFRARNFPGTLDDMEQQRWLQHRRQML-----NPERVQGYVQELEILFNQYEGDRARQE 461
Query: 353 ILNALLMYGKSIT 365
L AL Y + +
Sbjct: 462 QLKALFAYMQELV 474
>gi|422013851|ref|ZP_16360469.1| exonuclease I [Providencia burhodogranariea DSM 19968]
gi|414102363|gb|EKT63956.1| exonuclease I [Providencia burhodogranariea DSM 19968]
Length = 475
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 204/371 (54%), Gaps = 16/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP ++G PS +LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQQGNSRWDLLDALRACFALRPEGINWPENDDGLPSMRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+F++ LR K V I P +++
Sbjct: 174 VTHENAHDAMSDVLATISMAKLLKAAQPRMFDYFYQLRNKNKVNQLIDIVDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SY+SL+ P+ HP N+N +I +L D + +R+ L K ++
Sbjct: 234 MFGALRSYVSLVAPLAWHPDNRNAVIMCDLAADISPLINLSAQTLRERLYTPKAELGDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+ PI+ K L + R D + +N++ + + I K+
Sbjct: 294 PVPIKLVHINKCPILAPE-KTLRTEDAERTGVDRDMCLRNLEI---LRQHPDIRNKVIEV 349
Query: 239 YKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ +EL ++D ++Y+ F S D + I+R + L ++ FE+ +++EL F Y
Sbjct: 350 FAETAPFVELDDVDTKIYSGFFSNSDRSTMDIIRETPVQNLPALDLAFEDPRMKELFFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT---KIL 354
+ARNF LSY+E +RW ++R R Y ++ L + +IESL+ + +++DT K L
Sbjct: 410 KARNFPTILSYEEQQRWLQHR--RDYFTESRLIE---YMQKIESLMVE-HQNDTERCKQL 463
Query: 355 NALLMYGKSIT 365
AL+ Y +
Sbjct: 464 KALVNYAAELA 474
>gi|259908083|ref|YP_002648439.1| exonuclease I [Erwinia pyrifoliae Ep1/96]
gi|387870897|ref|YP_005802269.1| exodeoxyribonuclease I [Erwinia pyrifoliae DSM 12163]
gi|224963705|emb|CAX55202.1| Exodeoxyribonuclease I [Erwinia pyrifoliae Ep1/96]
gi|283477982|emb|CAY73898.1| exodeoxyribonuclease I [Erwinia pyrifoliae DSM 12163]
Length = 475
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 197/373 (52%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++V++A Y L P GITWP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAWSWQHGNSRWDLLDVMRACYALRPDGITWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+ ++ PRL++F+ S R K+ + I P +P +I+
Sbjct: 174 VAHENAHDAMSDVYATIAMAKRVKEKQPRLYDFLFSHRNKQKISTLIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK--E 178
MF + S + P+ HP N+N LIT +L D L D + +R L ++
Sbjct: 234 MFGAARGNTSWIAPLAWHPDNRNALITCDLDGDMAPLLELDADALRARLYTRREELDGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--- 235
+P+ ++H+N+ P+V + L + R D N+ + + + + K+
Sbjct: 294 PVPLKLVHINKCPVV-APANTLRAEDAERIGIDRQRCLDNL---ALLRQHPEVRDKVVTL 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD ++D +LYN F S D + I+R + + L ++ F + ++E+L+
Sbjct: 350 FADAQPFTPSD---DVDAQLYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDTK 352
F +RARNF TL E +RW ++R N + + E+E L + + +
Sbjct: 407 FRFRARNFPGTLDDMEQQRWLQHRRQML-----NPERVQGYVQELEMLFNQYEGDRARQE 461
Query: 353 ILNALLMYGKSIT 365
L AL Y + +
Sbjct: 462 QLKALFAYMQELV 474
>gi|238795750|ref|ZP_04639264.1| Exodeoxyribonuclease I [Yersinia mollaretii ATCC 43969]
gi|238720476|gb|EEQ12278.1| Exodeoxyribonuclease I [Yersinia mollaretii ATCC 43969]
Length = 476
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 191/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP +G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIIWPENEDGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
IP+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAIPLKLVHINKCPVLAPAKTLLPENAE-RLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEAQNLPALDLTFQDPRLEPLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E KRW ++R N + + L++E + + K +L
Sbjct: 410 FRARNYPNTLTDSEQKRWLEHRREAL-----NPERVQDYVLQLEQFYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y K +
Sbjct: 465 KALFEYAKGLV 475
>gi|432704805|ref|ZP_19939907.1| exodeoxyribonuclease I [Escherichia coli KTE171]
gi|431243034|gb|ELF37423.1| exodeoxyribonuclease I [Escherichia coli KTE171]
Length = 475
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 193/373 (51%), Gaps = 20/373 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQNRNSRWDLLDVMRACYALRPDGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ P+LF+++ + R K ++ I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKAQQPKLFDYLYAYRGKNKLMTLIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 235 MFGAWRGNTSWIAPLAWHPDNRNAVIMVDLAGDIAPLLELDADTLRERLYTPKAELGDSS 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++HLN+ P V++ L R + N+K + +N + +K+
Sbjct: 295 PVPIKLVHLNKCP-VLAQANTLRPEDADRLGINRQHCLDNLKL---LRDNPQVREKVVAI 350
Query: 239 YKINN----SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F + ++E+L+
Sbjct: 351 FAEAEPFVASD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADPRIEKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTK 352
F +RARNF TL E +RW ++R F + Y + M Y + E N
Sbjct: 408 FNFRARNFPGTLDENEQQRWLEHRRQIFTPEFLQAYAQQLEMLYGQYE-----GNNEKLS 462
Query: 353 ILNALLMYGKSIT 365
+L AL Y + I
Sbjct: 463 LLKALYQYVQEIV 475
>gi|452119738|ref|YP_007469986.1| exonuclease I [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|451908742|gb|AGF80548.1| exonuclease I [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 476
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K ++A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLVALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 352 FAETEPFAASDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 411
Query: 298 RARNFIETLSYKELKRWKKYR 318
RARNF TL E +RW ++R
Sbjct: 412 RARNFPGTLDDAEQQRWLEHR 432
>gi|283832563|ref|ZP_06352304.1| exodeoxyribonuclease I [Citrobacter youngae ATCC 29220]
gi|291072232|gb|EFE10341.1| exodeoxyribonuclease I [Citrobacter youngae ATCC 29220]
Length = 474
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 195/376 (51%), Gaps = 26/376 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A I P +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTAKADLGDNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+ + N + K I
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLNL---LRENPQVRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F D + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FADAEPFAPSD---NVDTQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF-----YNKKNNLYNINMFYLEIESLLKKANEH 349
F YRARNF TL E +RW +R F N N L ++ Y + N+
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLDHRRQVFTPEFLQNYANELQTLSQQYAD--------NKE 458
Query: 350 DTKILNALLMYGKSIT 365
+L +L Y + I
Sbjct: 459 KLMLLKSLWQYAQEIV 474
>gi|288549827|ref|ZP_05968320.2| exodeoxyribonuclease I [Enterobacter cancerogenus ATCC 35316]
gi|288317556|gb|EFC56494.1| exodeoxyribonuclease I [Enterobacter cancerogenus ATCC 35316]
Length = 478
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 179/321 (55%), Gaps = 7/321 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+++++A + L P GITWP G SF+LEHL+ N
Sbjct: 118 IFYRNFYDPYAWSWQNRNSRWDLLDIMRACHALRPEGITWPENEEGLTSFRLEHLTRANG 177
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++LS R K+ ++ I P +P +I+
Sbjct: 178 IEHSNAHDAMADVYATIAMAKLVKTAQPRLFDYLLSHRSKQKLITLIDVPQMKPLVHISG 237
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K++ +
Sbjct: 238 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDALRERLYTPKDALGDVP 297
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + +K+
Sbjct: 298 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVREKVVAI 353
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 354 FAEAEPFVPSENVDAQLYNGFFSDADRAAMNIVLQTEPRNLPALDITFADKRIEKLMFNY 413
Query: 298 RARNFIETLSYKELKRWKKYR 318
RARN+ TL E +RW ++R
Sbjct: 414 RARNYPGTLDEAEQERWLQHR 434
>gi|440287041|ref|YP_007339806.1| exonuclease I [Enterobacteriaceae bacterium strain FGI 57]
gi|440046563|gb|AGB77621.1| exonuclease I [Enterobacteriaceae bacterium strain FGI 57]
Length = 474
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 10/368 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N+ SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQNHNSRWDLLDVMRACYALRPEGINWPENEDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ P+LF+++ + R K+ + I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTQQPKLFDYLYAYRSKQKLTTLIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 234 MFGAWRGNTSWIAPLAWHPDNRNAVIMVDLAGDISSLLDLDADTLRERLYTPKAELGDTS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++HLN+ P V++ L R + N+K + N + +K+
Sbjct: 294 PVPVKLVHLNKCP-VLAVANTLRPEDAERLGINRQHCLDNLKV---LRENPQVREKVVAI 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F + ++E+L+F Y
Sbjct: 350 FAEAEPFVPSPNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDLTFADARIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNAL 357
RARNF +L +E RW ++R F + Y M LE + N +L AL
Sbjct: 410 RARNFPGSLDEQEQMRWLEHRRDVFTPEFLQAY---MQQLEALYAQYEGNSEKLALLKAL 466
Query: 358 LMYGKSIT 365
Y + I
Sbjct: 467 YQYAQEIV 474
>gi|339999847|ref|YP_004730730.1| exodeoxyribonuclease I [Salmonella bongori NCTC 12419]
gi|339513208|emb|CCC30958.1| exodeoxyribonuclease I [Salmonella bongori NCTC 12419]
Length = 476
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 195/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A I P +P +I+
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHISG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D N +R+ L K ++
Sbjct: 236 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSNALRERLYTAKADLGDNA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 352 FAEAEPFTAPDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 411
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILN 355
RARNF TL E RW ++R + + + E++ L ++ E TK +L
Sbjct: 412 RARNFPGTLDDAEQLRWLEHRRQVLTPEF-----LQQYANELQMLSQQYAEDKTKLGLLK 466
Query: 356 ALLMYGKSIT 365
AL Y I
Sbjct: 467 ALWQYATEIV 476
>gi|33152477|ref|NP_873830.1| exonuclease I [Haemophilus ducreyi 35000HP]
gi|33148700|gb|AAP96219.1| exonuclease I [Haemophilus ducreyi 35000HP]
Length = 513
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 201/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL+++++A Y L P GI WP +PSFKLEHL+ N +
Sbjct: 112 FFRNFYDPYEYCWKNGNSRWDLLDLVRACYALRPSGIEWPKNEKDEPSFKLEHLTKANAI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA++DV AT+ +A+LI+ +LF+F R KK + I P +++ M
Sbjct: 172 AHQNAHDAMADVYATIEIAKLIKQKQRKLFDFFFENRSKKALEKLIDPAELTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP N+N ++ +L D + L + ++ L K+++ E
Sbjct: 232 LGNYRGNTALIVPLAWHPTNQNAVVVCDLSSDIQGLLNDTAEVLKQRLYTKRDALAEHES 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
+P+ ++HLN+ PI+ +L+ N M R D + N ++ +++ I +I
Sbjct: 292 PVPLKLVHLNKCPILAPAKTLLAENAM-RLAIDRSQCLLNLAKLQAQKAVVREKVI--EI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F D +I N++ LY++F S D LAILR++ P++L+ F +K++E L+F
Sbjct: 349 FNDERIFAP--SNNVETTLYDSFFSNGDKNNLAILRTLKPEQLAEHGLKFADKRVEPLLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI-- 353
YRAR+F TL+ E +W+KY + K F EI +L ++ +H K+
Sbjct: 407 HYRARHFPNTLTRAEQIKWQKYCHQQIDAK------TEQFSQEIANLFERYADHADKVKL 460
Query: 354 LNALLMYGKSITQ 366
L L Y ++Q
Sbjct: 461 LEDLTAYATQLSQ 473
>gi|397686000|ref|YP_006523319.1| exonuclease I [Pseudomonas stutzeri DSM 10701]
gi|395807556|gb|AFN76961.1| exonuclease I [Pseudomonas stutzeri DSM 10701]
Length = 477
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 190/349 (54%), Gaps = 18/349 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P G+ WP + +G+ + KLE LS N L
Sbjct: 110 LYRNFHDPYAREWQGGNSRWDLIDLVRTAYALRPEGLVWP-EEDGRVTLKLERLSVANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+GLARLIR PRL+ ++ LR+K+ VL ++ + +P +I+
Sbjct: 169 EHLQAHDALSDVRATIGLARLIRERQPRLYRYLYELRRKQAVLDQVQ--LLKPMVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDIP 181
FS+ Y+S++ P+ HP N+N LI +L + +R+ L +++ + +P
Sbjct: 227 FSAARHYLSVVLPLAWHPRNRNALIVCDLQAECSPLWEESAETLRERLYTRRDELEGQLP 286
Query: 182 IS--MIHLNRSPIVISNLKVLSSNLMFRYKFDLN-CAFKNIKCASSILNNTYIWKKIFLD 238
+ ++H+NR P V++ + VL + + R DL+ C + A + + +W D
Sbjct: 287 VPLKLVHINRCP-VLAPMNVLRAADIARLGLDLDSCETR----ARRLRDCQDVWNAKLGD 341
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ LE + +++LY+ F+ ++D +R+ + F++ +L EL+F
Sbjct: 342 IYAEEPFAGLE-DPEQQLYDGFLGERDRRLCEQVRNHPAPDSTLRTLPFDDPRLPELLFR 400
Query: 297 YRARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLEIES 341
YRARNF ++LS E ++W + R + N L E+++
Sbjct: 401 YRARNFPQSLSETEQQQWHLFCQKRLTLPEWGAPNTLAQFEQAMREVQA 449
>gi|421530220|ref|ZP_15976720.1| exonuclease I [Pseudomonas putida S11]
gi|402212338|gb|EJT83735.1| exonuclease I [Pseudomonas putida S11]
Length = 477
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 194/372 (52%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPDGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIS--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHEELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++ +NR P V++ L VL R DL + W+ L+
Sbjct: 287 PVPLKLVQINRCP-VLAPLSVLRPADQQRLGLDLTLLQLR---GEELAEQQAQWQDK-LE 341
Query: 239 YKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ D + D E LY+ F+ +D +R++ P +LS + F++ +L EL+F
Sbjct: 342 HIYGKEDFAPSEDPEQQLYDGFLGDRDRRLCEQVRALEPAQLSRGQWMFDDPRLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF ETL+ +E +RW + R + + N + F + + A++ ++L+
Sbjct: 402 YRARNFPETLTGEERQRWFSFCQQRLSDPQWGAPNTLGDFEHARQQAWEGADDAGRRVLD 461
Query: 356 ALLMYGKSITQK 367
A ++ + + +
Sbjct: 462 AWQVHARQLQAQ 473
>gi|16760997|ref|NP_456614.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29141307|ref|NP_804649.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56413034|ref|YP_150109.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197361958|ref|YP_002141595.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|213053400|ref|ZP_03346278.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213421859|ref|ZP_03354925.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
gi|213425574|ref|ZP_03358324.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213648908|ref|ZP_03378961.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|289829232|ref|ZP_06546844.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|378958956|ref|YP_005216442.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|25289114|pir||AF0763 exodeoxyribonuclease I (EC 3.1.11.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503295|emb|CAD02428.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29136934|gb|AAO68498.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56127291|gb|AAV76797.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197093435|emb|CAR58890.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|374352828|gb|AEZ44589.1| Exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 476
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFATSD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|204929131|ref|ZP_03220274.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204321675|gb|EDZ06874.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 476
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 352 FAETEPFAASDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 411
Query: 298 RARNFIETLSYKELKRWKKYR 318
RARNF TL E +RW ++R
Sbjct: 412 RARNFPGTLDDAEQQRWLEHR 432
>gi|300717468|ref|YP_003742271.1| exodeoxyribonuclease I [Erwinia billingiae Eb661]
gi|299063304|emb|CAX60424.1| Exodeoxyribonuclease I [Erwinia billingiae Eb661]
Length = 475
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 196/363 (53%), Gaps = 19/363 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 LLYRNFYDPYGWAWQHGNSRWDLLDVMRACYALRPEGIAWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDA+SDV AT+ +A+L++ PRL++F+ + R K + A I P +P +I+
Sbjct: 174 VSHENAHDAMSDVYATIAMAKLVKEKQPRLYDFLFTHRNKNKITALIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP+NKN LIT +L D L D + +R+ L ++ ++
Sbjct: 234 MFGAFRGNTSWIAPLAWHPVNKNALITCDLAGDITPLLELDADTLRERLYTRREELGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P+V + L R D N+ + + + + +K+
Sbjct: 294 PVPVKLMHINKCPVV-APANTLRPEDAERLGIDRKRCLDNL---AILRQHPEVREKVVAL 349
Query: 239 YK-----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ +SD +D +LY+ F S D + I++ P+ L ++ F + ++E+L
Sbjct: 350 FAEAEPFAGSSD----VDAQLYDGFFSDADRNTMNIIQQTLPENLPALDLTFNDARIEKL 405
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDT 351
+F +RARN+ TL E RW ++R ++ Y + M + + E + K E D
Sbjct: 406 LFRFRARNYPGTLDEAEQTRWLQHRREALNPERVQSYVQELEMLFNQYEGDIGK--EKDL 463
Query: 352 KIL 354
K+L
Sbjct: 464 KML 466
>gi|379701291|ref|YP_005243019.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383496777|ref|YP_005397466.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|323130390|gb|ADX17820.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|380463598|gb|AFD59001.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
Length = 476
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+PI ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPIKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|418828986|ref|ZP_13383981.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392785789|gb|EJA42355.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
Length = 428
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 68 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 127
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 128 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 187
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 188 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 247
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 248 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 303
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 304 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 360
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 361 FNYRARNFPGTLDDAEQQRWLEHR 384
>gi|416426230|ref|ZP_11692795.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416430493|ref|ZP_11695052.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416440303|ref|ZP_11700796.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416442533|ref|ZP_11702415.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416452498|ref|ZP_11709049.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456678|ref|ZP_11711631.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470034|ref|ZP_11718673.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416474944|ref|ZP_11720346.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416492396|ref|ZP_11727433.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416500582|ref|ZP_11731586.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416505020|ref|ZP_11733516.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416513571|ref|ZP_11737939.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416531555|ref|ZP_11745661.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416536760|ref|ZP_11748574.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416541440|ref|ZP_11750973.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416559271|ref|ZP_11760606.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416569882|ref|ZP_11765745.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416579464|ref|ZP_11771322.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584674|ref|ZP_11774324.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416591113|ref|ZP_11778229.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596284|ref|ZP_11781252.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604144|ref|ZP_11785960.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416613634|ref|ZP_11792138.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416619698|ref|ZP_11795307.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630264|ref|ZP_11800622.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416642171|ref|ZP_11805794.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416651917|ref|ZP_11811395.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416654553|ref|ZP_11812234.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416668295|ref|ZP_11818839.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416673519|ref|ZP_11820905.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416701341|ref|ZP_11829365.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416705230|ref|ZP_11830785.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416714942|ref|ZP_11838239.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416716263|ref|ZP_11838687.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416721645|ref|ZP_11842804.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416732062|ref|ZP_11849627.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741302|ref|ZP_11855030.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416746142|ref|ZP_11857703.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753441|ref|ZP_11860831.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416762846|ref|ZP_11866761.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768217|ref|ZP_11870473.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418484227|ref|ZP_13053229.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418491954|ref|ZP_13058458.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493863|ref|ZP_13060324.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418497436|ref|ZP_13063854.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502208|ref|ZP_13068581.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418508966|ref|ZP_13075265.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418527889|ref|ZP_13093844.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322613666|gb|EFY10606.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322620237|gb|EFY17106.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623283|gb|EFY20124.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630488|gb|EFY27257.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632835|gb|EFY29580.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322638832|gb|EFY35526.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640283|gb|EFY36945.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647148|gb|EFY43647.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648974|gb|EFY45417.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653880|gb|EFY50204.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660987|gb|EFY57216.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663072|gb|EFY59279.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668517|gb|EFY64672.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673348|gb|EFY69451.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322679134|gb|EFY75188.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683229|gb|EFY79244.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685901|gb|EFY81891.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323195188|gb|EFZ80369.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198756|gb|EFZ83856.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202400|gb|EFZ87443.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323213844|gb|EFZ98621.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216128|gb|EGA00858.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323223218|gb|EGA07560.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323223733|gb|EGA08040.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231339|gb|EGA15453.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323232569|gb|EGA16666.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240988|gb|EGA25028.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323245593|gb|EGA29588.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247623|gb|EGA31572.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251066|gb|EGA34940.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257464|gb|EGA41155.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263357|gb|EGA46891.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266324|gb|EGA49813.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271468|gb|EGA54890.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363549018|gb|EHL33377.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363557030|gb|EHL41241.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363564401|gb|EHL48454.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363567853|gb|EHL51850.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363576030|gb|EHL59872.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363576103|gb|EHL59943.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366059049|gb|EHN23325.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366059529|gb|EHN23802.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366063547|gb|EHN27764.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366075527|gb|EHN39580.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366075911|gb|EHN39959.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366079027|gb|EHN43021.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366827317|gb|EHN54224.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372204209|gb|EHP17738.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 476
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDLA 295
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|288942185|ref|YP_003444425.1| Exodeoxyribonuclease I [Allochromatium vinosum DSM 180]
gi|288897557|gb|ADC63393.1| Exodeoxyribonuclease I [Allochromatium vinosum DSM 180]
Length = 477
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 192/381 (50%), Gaps = 33/381 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW++ SRWDLI+V++ + L P GI WP + G SF+LE L+ N
Sbjct: 109 LFYRNFFDPYAREWRSGNSRWDLIDVLRLAHALRPEGIEWPLNDEGTTSFRLEQLTVANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDAL+DVRAT+ LAR +R+ PRLF++ L+LR K+ V A + RP +++
Sbjct: 169 IDHGQAHDALADVRATIALARRLRDIQPRLFSYALTLRDKRRVRALLD--ERRPLLHVSA 226
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK--- 177
F + I+ + P+ HP N N +I ++L DP + L + +IR L
Sbjct: 227 RFPAALGCIAPICPVAAHPTNSNGVICFDLRADPSQLLELSVEEIRRRLFTPSEDLPAGV 286
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIK--CASSILNNTYIWKKI 235
E +P+ +H+N P+ ++ L L+ R+ D ++ + ASSI + +
Sbjct: 287 ERVPLKTVHVNHVPM-LAPLATLTPERAERWSIDPARVVRHAQWIAASSIAIESRV---- 341
Query: 236 FLDYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
++ L + D EL F+S D + +P +L+ F + +L
Sbjct: 342 ---RAVHERPLPVETDPELMLYSGGFLSDADRRACDQVVRSNPAELATAPPRFSDPRLGT 398
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIES----LLKKANE 348
L+F YRARN+ ETL+ +E + W YR R + L+IE L + A
Sbjct: 399 LLFRYRARNWPETLTPEEREDWDAYRFMRLTDPDGGA------SLQIEGYEARLAELAGV 452
Query: 349 HDT-----KILNALLMYGKSI 364
HD IL+AL + + +
Sbjct: 453 HDDDPARLAILDALGDWAEQV 473
>gi|62180647|ref|YP_217064.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|167551009|ref|ZP_02344764.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168259635|ref|ZP_02681608.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168818244|ref|ZP_02830244.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194443671|ref|YP_002041334.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197247769|ref|YP_002147025.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|198243454|ref|YP_002216153.1| exonuclease I [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|224583437|ref|YP_002637235.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238913451|ref|ZP_04657288.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|375001874|ref|ZP_09726214.1| exonuclease [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|375114972|ref|ZP_09760142.1| Exonuclease, RNase T and DNA polymerase III [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375119632|ref|ZP_09764799.1| LPS-assembly lipoprotein RlpB [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|418789387|ref|ZP_13345174.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418794187|ref|ZP_13349909.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418796786|ref|ZP_13352477.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418809617|ref|ZP_13365169.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418813771|ref|ZP_13369292.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418815038|ref|ZP_13370546.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418822825|ref|ZP_13378236.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418830127|ref|ZP_13385090.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418836511|ref|ZP_13391395.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418840718|ref|ZP_13395547.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418844833|ref|ZP_13399619.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418850750|ref|ZP_13405466.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418853742|ref|ZP_13408427.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|421884618|ref|ZP_16315827.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|440763363|ref|ZP_20942404.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440769119|ref|ZP_20948079.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440771264|ref|ZP_20950183.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445154583|ref|ZP_21391910.1| exonuclease I [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|62128280|gb|AAX65983.1| exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194402334|gb|ACF62556.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|197211472|gb|ACH48869.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197937970|gb|ACH75303.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205323967|gb|EDZ11806.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205344805|gb|EDZ31569.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205351000|gb|EDZ37631.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224467964|gb|ACN45794.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322715118|gb|EFZ06689.1| Exonuclease, RNase T and DNA polymerase III [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|326623899|gb|EGE30244.1| LPS-assembly lipoprotein RlpB [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|353076562|gb|EHB42322.1| exonuclease [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|379985745|emb|CCF88100.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|392760628|gb|EJA17463.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392762182|gb|EJA18998.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392770159|gb|EJA26887.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392773702|gb|EJA30398.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392774997|gb|EJA31692.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392787082|gb|EJA43630.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392793417|gb|EJA49861.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392800872|gb|EJA57102.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392802360|gb|EJA58574.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392811208|gb|EJA67220.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392813642|gb|EJA69606.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392818600|gb|EJA74484.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392825882|gb|EJA81616.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|436415107|gb|ELP13028.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|436420262|gb|ELP18129.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436422299|gb|ELP20137.1| exonuclease I [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|444850828|gb|ELX75925.1| exonuclease I [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
Length = 476
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|183599505|ref|ZP_02960998.1| hypothetical protein PROSTU_02983 [Providencia stuartii ATCC 25827]
gi|188021751|gb|EDU59791.1| exonuclease domain protein [Providencia stuartii ATCC 25827]
Length = 475
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 198/371 (53%), Gaps = 16/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++ ++A + L P GI WP + G PS +LEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQQGNSRWDLLDTVRACFALRPEGIIWPENDEGLPSMRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+L++ PR+FN+ LR K V I P +++
Sbjct: 174 IAHENAHDAMSDVLATINMAKLLKAAQPRMFNYFYQLRNKNKVNQLIDIVDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + SYISL+ P+ HP N+N +I +L D + + +R+ L K +
Sbjct: 234 MFGALRSYISLVAPLAWHPDNRNAVIMCDLAADISPLVNLPVETLRERLYTPKTELDGEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI ++H+N+ PI+ K L R D + +N++ + + I K+
Sbjct: 294 PVPIKLVHINKCPILAPE-KTLRIEDAERTGVDRDLCLRNLEI---LRKHPDIRHKVIEI 349
Query: 239 YKINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ E N +D ++Y+ F S D + I+R K L ++ FE+ +++EL F Y
Sbjct: 350 FAQAQPFEEPNDVDAQIYSGFFSSSDRSTMDIIRETPEKNLPALDLTFEDPRMKELFFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLE-IESLL--KKANEHDTKIL 354
+ARN+ TLSY E +RW ++R R Y ++ L M Y++ IESL+ + + K L
Sbjct: 410 KARNYPSTLSYDEQQRWLQHR--RDYFTESRL----MEYMQSIESLMIEHQNDVERCKQL 463
Query: 355 NALLMYGKSIT 365
AL+ Y +
Sbjct: 464 KALVNYAAELA 474
>gi|168229383|ref|ZP_02654441.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168466281|ref|ZP_02700151.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194472204|ref|ZP_03078188.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205353209|ref|YP_002227010.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207857502|ref|YP_002244153.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375124046|ref|ZP_09769210.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378954577|ref|YP_005212064.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|417531980|ref|ZP_12186518.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|418760630|ref|ZP_13316783.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418764975|ref|ZP_13321068.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418772245|ref|ZP_13328249.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418775460|ref|ZP_13331418.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418781368|ref|ZP_13337251.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418783633|ref|ZP_13339478.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418803424|ref|ZP_13359045.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|419789593|ref|ZP_14315273.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419792344|ref|ZP_14317986.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421359518|ref|ZP_15809811.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363912|ref|ZP_15814150.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421366953|ref|ZP_15817155.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421372932|ref|ZP_15823077.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421375297|ref|ZP_15825410.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421382080|ref|ZP_15832131.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421386793|ref|ZP_15836799.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391133|ref|ZP_15841104.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395501|ref|ZP_15845437.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398059|ref|ZP_15847968.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402387|ref|ZP_15852245.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409166|ref|ZP_15858961.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421411655|ref|ZP_15861419.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418068|ref|ZP_15867774.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421422626|ref|ZP_15872294.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421425016|ref|ZP_15874653.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421433113|ref|ZP_15882681.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421434248|ref|ZP_15883798.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441993|ref|ZP_15891453.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443120|ref|ZP_15892562.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449899|ref|ZP_15899279.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436630526|ref|ZP_20515385.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436794221|ref|ZP_20522027.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436809378|ref|ZP_20528758.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436814870|ref|ZP_20532421.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436844292|ref|ZP_20538050.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436854378|ref|ZP_20544012.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436855898|ref|ZP_20545023.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436864398|ref|ZP_20550365.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436870134|ref|ZP_20553940.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436877625|ref|ZP_20558553.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436886564|ref|ZP_20562984.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436893657|ref|ZP_20567564.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436901405|ref|ZP_20572315.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436912558|ref|ZP_20578387.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436920437|ref|ZP_20583033.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436926773|ref|ZP_20586599.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436936507|ref|ZP_20591947.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436940520|ref|ZP_20594464.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436950815|ref|ZP_20599870.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436961861|ref|ZP_20605235.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969050|ref|ZP_20608171.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436984731|ref|ZP_20614606.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436989201|ref|ZP_20616502.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437000453|ref|ZP_20620682.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437021005|ref|ZP_20627740.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437032461|ref|ZP_20631942.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437044246|ref|ZP_20637199.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047251|ref|ZP_20638766.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437059029|ref|ZP_20645876.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437064930|ref|ZP_20648704.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437077014|ref|ZP_20655222.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082254|ref|ZP_20658302.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437091918|ref|ZP_20663518.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437113757|ref|ZP_20668959.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437125548|ref|ZP_20674075.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437128768|ref|ZP_20675455.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437139073|ref|ZP_20681555.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437144255|ref|ZP_20684869.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437151153|ref|ZP_20689030.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161758|ref|ZP_20695673.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437170073|ref|ZP_20700168.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437178943|ref|ZP_20705061.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437180627|ref|ZP_20706085.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437262051|ref|ZP_20718797.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437267503|ref|ZP_20721255.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437280774|ref|ZP_20728151.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437289818|ref|ZP_20731196.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437311995|ref|ZP_20736103.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437330533|ref|ZP_20741697.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437346751|ref|ZP_20746905.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437435299|ref|ZP_20756386.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437460907|ref|ZP_20761860.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437479846|ref|ZP_20768193.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437494482|ref|ZP_20772511.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437505463|ref|ZP_20775517.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437521386|ref|ZP_20778848.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437550834|ref|ZP_20783654.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437572175|ref|ZP_20788937.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437589615|ref|ZP_20794185.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437599883|ref|ZP_20797042.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437616947|ref|ZP_20802699.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437653383|ref|ZP_20810196.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437662052|ref|ZP_20813269.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437696025|ref|ZP_20822348.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437710639|ref|ZP_20826583.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437734434|ref|ZP_20832212.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437783302|ref|ZP_20836642.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437807730|ref|ZP_20839896.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437919979|ref|ZP_20850713.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438053585|ref|ZP_20856354.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438090635|ref|ZP_20860637.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438109386|ref|ZP_20867349.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438129783|ref|ZP_20873392.1| exonuclease I [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|445176685|ref|ZP_21397656.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445183736|ref|ZP_21398772.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445232427|ref|ZP_21406061.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445332001|ref|ZP_21414343.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445353535|ref|ZP_21421276.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445359341|ref|ZP_21423148.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|194458568|gb|EDX47407.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195631242|gb|EDX49802.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|205272990|emb|CAR37938.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205335677|gb|EDZ22441.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|206709305|emb|CAR33645.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326628296|gb|EGE34639.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|353663801|gb|EHD02394.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|357205188|gb|AET53234.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|392615378|gb|EIW97817.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392619068|gb|EIX01454.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392732359|gb|EIZ89570.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392741924|gb|EIZ99019.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392742182|gb|EIZ99272.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392747136|gb|EJA04137.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392748533|gb|EJA05519.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392756645|gb|EJA13540.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392772953|gb|EJA29650.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|395985141|gb|EJH94314.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395985387|gb|EJH94557.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395989608|gb|EJH98742.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395998560|gb|EJI07587.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395999180|gb|EJI08202.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396005283|gb|EJI14262.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396011434|gb|EJI20344.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396012140|gb|EJI21038.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396012543|gb|EJI21439.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396026097|gb|EJI34870.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396031924|gb|EJI40649.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396032255|gb|EJI40979.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396039235|gb|EJI47863.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396041941|gb|EJI50564.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396045156|gb|EJI53750.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396049329|gb|EJI57872.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396058612|gb|EJI67073.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396060854|gb|EJI69295.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396062670|gb|EJI71081.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396068715|gb|EJI77061.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396070904|gb|EJI79231.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|434941783|gb|ELL48174.1| exonuclease I [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|434960895|gb|ELL54232.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434962843|gb|ELL55997.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434967195|gb|ELL60030.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434972986|gb|ELL65374.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434978878|gb|ELL70870.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434983181|gb|ELL74989.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434992112|gb|ELL83582.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995433|gb|ELL86749.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435002462|gb|ELL93527.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435008509|gb|ELL99332.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435011807|gb|ELM02510.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435018653|gb|ELM09115.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435020839|gb|ELM11228.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435026803|gb|ELM16934.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027956|gb|ELM18048.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435036614|gb|ELM26433.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435039345|gb|ELM29126.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435045425|gb|ELM35053.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435051000|gb|ELM40504.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435051282|gb|ELM40784.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435059151|gb|ELM48441.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435063362|gb|ELM52514.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435071459|gb|ELM60402.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435076371|gb|ELM65156.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435078605|gb|ELM67331.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435078973|gb|ELM67687.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435081450|gb|ELM70092.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435094842|gb|ELM83181.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435100423|gb|ELM88593.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435100672|gb|ELM88840.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435103852|gb|ELM91926.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435110600|gb|ELM98517.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435112824|gb|ELN00689.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435116055|gb|ELN03806.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435118207|gb|ELN05887.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435128284|gb|ELN15635.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435132595|gb|ELN19793.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435139246|gb|ELN26250.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435144208|gb|ELN31050.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435145036|gb|ELN31865.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435147853|gb|ELN34605.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435152360|gb|ELN38990.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435162422|gb|ELN48606.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167489|gb|ELN53411.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435170262|gb|ELN56018.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435176019|gb|ELN61421.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435182082|gb|ELN67114.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435183127|gb|ELN68102.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435189179|gb|ELN73824.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435189717|gb|ELN74341.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435213939|gb|ELN96799.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435219523|gb|ELO01885.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435220599|gb|ELO02881.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435227380|gb|ELO08889.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435235520|gb|ELO16323.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435246518|gb|ELO26520.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435247815|gb|ELO27744.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435251143|gb|ELO30826.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435256456|gb|ELO35762.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435261675|gb|ELO40829.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435262801|gb|ELO41883.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435264884|gb|ELO43774.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435267698|gb|ELO46363.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435277325|gb|ELO55279.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435286597|gb|ELO63847.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435288768|gb|ELO65763.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435299013|gb|ELO75185.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435300769|gb|ELO76832.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435313781|gb|ELO87328.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435316308|gb|ELO89471.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435316324|gb|ELO89486.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435332535|gb|ELP03446.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444856718|gb|ELX81743.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444862459|gb|ELX87313.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444870658|gb|ELX95146.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444873075|gb|ELX97383.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444877064|gb|ELY01221.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444885493|gb|ELY09281.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
Length = 476
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|200388584|ref|ZP_03215196.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199605682|gb|EDZ04227.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 476
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDTEQQRWLEHR 432
>gi|240949271|ref|ZP_04753615.1| exonuclease I [Actinobacillus minor NM305]
gi|240296387|gb|EER47031.1| exonuclease I [Actinobacillus minor NM305]
Length = 514
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 194/377 (51%), Gaps = 27/377 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL++V++A Y L P GI W G P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSWKNGNSRWDLLDVVRACYALRPEGIDWVKDEEGIPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H+ AHDA+SDV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 172 AHENAHDAMSDVYATISMAKLIKEKQPKLFQFFFEHRGKKEIEKLIDTAEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP N+N +I +L D + L +++ L K+ E
Sbjct: 232 LGNYRGNTAWVVPLAWHPTNQNAVIVCDLSGDIQGLLNESSEVLKNRLYTKRTELSEQEK 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC--ASSILNNTYIWKKIF 236
+P+ ++H+N+ PI ++ KVL R D +N+K A L + +
Sbjct: 292 PVPLKLVHINKCPI-LAPAKVLLPENAARLGIDREQCLENLKALKAQKSLVREKVIEIFT 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
D SD N++ LY+ F S+ D ++ILRS++P++L++ F + ++E+L+F
Sbjct: 351 EDRTFAPSD---NVETSLYDGFFSQADKNNMSILRSLAPEELAHHGLQFADLRVEKLLFH 407
Query: 297 YRARNFIETLSYKELKRWKKY-------RISRFYNKKNNLYNINMFYLEIESLLKKANEH 349
YRAR++ ETL+ E +W+KY R +F L+ I+ +E
Sbjct: 408 YRARHYPETLTRAEQIKWQKYCHQQLDLRAEQFAQSIETLFQIH-----------HDDEE 456
Query: 350 DTKILNALLMYGKSITQ 366
K+L L Y I+Q
Sbjct: 457 KVKLLEELTAYVAQISQ 473
>gi|417418121|ref|ZP_12159803.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353620171|gb|EHC70352.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 476
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IDHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|161613258|ref|YP_001587223.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161362622|gb|ABX66390.1| hypothetical protein SPAB_00968 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 476
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|168236215|ref|ZP_02661273.1| exodeoxyribonuclease I (Exonuclease I) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194733944|ref|YP_002115153.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194709446|gb|ACF88667.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290623|gb|EDY29978.1| exodeoxyribonuclease I (Exonuclease I) [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 476
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|418868304|ref|ZP_13422747.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|392838210|gb|EJA93774.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
Length = 476
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|319787286|ref|YP_004146761.1| exodeoxyribonuclease I [Pseudoxanthomonas suwonensis 11-1]
gi|317465798|gb|ADV27530.1| Exodeoxyribonuclease I [Pseudoxanthomonas suwonensis 11-1]
Length = 480
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 189/371 (50%), Gaps = 12/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFFDPYEREWRGGNSRWDLLDVMRLAHALRPEGIEWPKREDGATSFKLEHLALANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+GLARL+R PRL+++ L +R+K++ + + P +++
Sbjct: 170 REGDAHEALSDVYATIGLARLLRQAQPRLWDYALRMREKRHAASLLDTFAMNPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L D L +I D L
Sbjct: 230 YPAARMCAAAVLPLAVHPDISNRVIVFDLDGDVDALLEQAPEEIADRLYTPVADLPPGVS 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLNRSP+++ + + + R D A ++ + + + +K
Sbjct: 290 RVPLKEVHLNRSPMLVPWGHLRAPDFQ-RLGIDPELALARVERLRA--HGPELAEKARQV 346
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y + E ++D LY+ F D +R+ +P L + F F + +L EL+F Y
Sbjct: 347 YARGARERGEEDVDGALYSGFCGDGDRRLCVQVRATAPADLGSRAFEFRDPRLPELLFRY 406
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK---I 353
RARN+ ETL+ E RW YR R + Y F+ EI + L+ + D + +
Sbjct: 407 RARNWPETLTPDERGRWDDYRRRRLLADSGLSEYTFETFFAEI-ATLRATHAGDGQRLVL 465
Query: 354 LNALLMYGKSI 364
L+ L +G+ +
Sbjct: 466 LDQLEAWGREL 476
>gi|16765397|ref|NP_461012.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167990978|ref|ZP_02572077.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168242135|ref|ZP_02667067.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194450582|ref|YP_002046116.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|374981093|ref|ZP_09722423.1| Exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378445503|ref|YP_005233135.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450741|ref|YP_005238100.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378699980|ref|YP_005181937.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378984630|ref|YP_005247785.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378989455|ref|YP_005252619.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|386591885|ref|YP_006088285.1| Exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419730276|ref|ZP_14257222.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419734793|ref|ZP_14261678.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419738446|ref|ZP_14265209.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419745078|ref|ZP_14271721.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419746877|ref|ZP_14273447.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421572057|ref|ZP_16017721.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421574542|ref|ZP_16020163.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421579850|ref|ZP_16025412.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421586342|ref|ZP_16031824.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422026340|ref|ZP_16372733.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031364|ref|ZP_16377533.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427550829|ref|ZP_18928036.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427567130|ref|ZP_18932751.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427587444|ref|ZP_18937542.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427611076|ref|ZP_18942408.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427634585|ref|ZP_18947300.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656374|ref|ZP_18952067.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661521|ref|ZP_18956978.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427669905|ref|ZP_18961778.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|445146502|ref|ZP_21387716.1| exonuclease I [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|16420598|gb|AAL20971.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194408886|gb|ACF69105.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205330564|gb|EDZ17328.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205338443|gb|EDZ25207.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261247282|emb|CBG25107.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994119|gb|ACY89004.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301158628|emb|CBW18140.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913058|dbj|BAJ37032.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224713|gb|EFX49776.1| Exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|332989002|gb|AEF07985.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|381294284|gb|EIC35423.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381296307|gb|EIC37413.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381302390|gb|EIC43430.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381306502|gb|EIC47375.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381320567|gb|EIC61149.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383798929|gb|AFH46011.1| Exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402518727|gb|EJW26100.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402521325|gb|EJW28663.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402524742|gb|EJW32039.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402528396|gb|EJW35650.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414017659|gb|EKT01357.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414018558|gb|EKT02200.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414020122|gb|EKT03711.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414032283|gb|EKT15291.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414033526|gb|EKT16475.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414036686|gb|EKT19498.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414046674|gb|EKT28989.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414048047|gb|EKT30304.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414052738|gb|EKT34766.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059348|gb|EKT40930.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|444845399|gb|ELX70609.1| exonuclease I [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
Length = 476
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|188992104|ref|YP_001904114.1| exonuclease I [Xanthomonas campestris pv. campestris str. B100]
gi|167733864|emb|CAP52070.1| Exodeoxyribonuclease I [Xanthomonas campestris pv. campestris]
Length = 481
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 193/375 (51%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANAV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQSQPKLWDYALRLRDKRFAASLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPATRLCAAAVLPLTRHPRIDSRVIVFDLDGDPDALLRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + S +L + ++ A K A + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWQHLRSDDLQ---RLGVDRAAVEAKAARLRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D L +RS +P +L + F + +L EL+F
Sbjct: 347 YGAERAGAAAVNDADASLYDGFLAEGDKRLLTQVRSSAPAELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS E +RW YR R + + FY +I L + TK +
Sbjct: 407 YRARNWPQTLSPDEHQRWNAYRRQRLLEDRGLGEVTLEQFYAQIADLRLAHPDDATKQSL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|197263773|ref|ZP_03163847.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242028|gb|EDY24648.1| exodeoxyribonuclease I [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 476
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|418021273|ref|ZP_12660389.1| Exonuclease I [Candidatus Regiella insecticola R5.15]
gi|347603375|gb|EGY28224.1| Exonuclease I [Candidatus Regiella insecticola R5.15]
Length = 471
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 199/366 (54%), Gaps = 20/366 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYNWQNGNSRWDLLDVVRACYALRPEGINWP----EIPSFKLEHLAKANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H KAHDA+SDV AT+ LA+L++ PRLF + R K + A I P +++
Sbjct: 170 IQHLKAHDAMSDVYATIELAKLVKQAQPRLFKYFYHHRSKHKIKALIDIENMTPLVHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S ISL+ P+ HP NKN +I +L D L D++ +R++L K+
Sbjct: 230 MFGVRRSNISLVAPLAWHPENKNAVIVCDLTADISPLSL-DVSTLREHLYTPKDPLNPQQ 288
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ ++H+N+ PI ++ + R K DL ++ S+ N I +K+
Sbjct: 289 ITIPLKLVHINKCPI-LALVNTWREKETKRLKIDLQYCLNQLE---SLRQNPQIKEKVNA 344
Query: 238 DYKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+K + ++ N+D +LY F + D + ++ SP+ L +NFCF++ +LE L+F
Sbjct: 345 LFKQMTARPKVNNVDAQLYCGFFNDTDRNTIKKIQQTSPQNLPALNFCFQDPRLETLLFR 404
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKIL 354
+RARN+ TL E +RW +YR ++ + + L+++ L + +E + +L
Sbjct: 405 FRARNYHNTLDDAEQRRWLEYRKEVLSPER-----LKEYILQLDQLCHQYQDDEEKSSLL 459
Query: 355 NALLMY 360
+LL Y
Sbjct: 460 KSLLNY 465
>gi|161502767|ref|YP_001569879.1| exonuclease I [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160864114|gb|ABX20737.1| hypothetical protein SARI_00818 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 476
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 178/323 (55%), Gaps = 11/323 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWD+++V++A Y L P GI WP ++G PSF+LEHL+ N+
Sbjct: 116 IFYRNFYDPYAWSWQHENSRWDILDVMRACYALRPEGINWPENDDGLPSFRLEHLTQAND 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +I+
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHISG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +RD L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRDRLYTAKADLGNNA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F + + +S N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F
Sbjct: 352 FAEAEPFSS--PDNVDAQLYDGFFSDSDRAAMKIVLETEPRNLPALDITFVDKRIEKLLF 409
Query: 296 LYRARNFIETLSYKELKRWKKYR 318
YRARNF TL E +RW +R
Sbjct: 410 NYRARNFPGTLDDAEQQRWLAHR 432
>gi|167855672|ref|ZP_02478429.1| exodeoxyribonuclease I [Haemophilus parasuis 29755]
gi|167853190|gb|EDS24447.1| exodeoxyribonuclease I [Haemophilus parasuis 29755]
Length = 516
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 192/375 (51%), Gaps = 22/375 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL++V++A Y L P GI W Y + G PSFKLE+L+ N +
Sbjct: 111 FFRNFFDPYEYSWKNGNSRWDLLDVVRACYALRPEGIEWAYDDEGMPSFKLENLTKANGI 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA++DV AT+ +A+LI+ P+LF+F L R KK + I P +++ M
Sbjct: 171 AHDNAHDAMADVYATIAMAKLIKQKQPKLFDFFLQNRGKKALEEMIDVGEMTPLVHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP N+N +I +L + L +R+ L KK +
Sbjct: 231 LGNYRGNTAWVVPLAWHPTNRNAVIVCDLSGNINDLLNEPSEILRERLYTKKVELEAQGL 290
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ PI+ +LS N R D +N+K S + + +K+
Sbjct: 291 YAVPLKLVHINKCPILAPAKTLLSENAT-RLGIDRQACLENLKLLKS--QKSLVREKVID 347
Query: 237 -----LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLE 291
+Y +N NI+ LY+ F D +AILR++ P++L++ F + ++E
Sbjct: 348 ILSEERNYPASN-----NIETTLYDGFFEPADKNNMAILRNLKPEELAHHGLKFSDPRIE 402
Query: 292 ELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
L+F YRAR++ ETL+ E RW+KY + K +++ S N
Sbjct: 403 PLLFHYRARHYSETLTRAEQVRWQKYCYQQLETKAEAFEQA----VDLLSAQYHDNSEKI 458
Query: 352 KILNALLMYGKSITQ 366
K+L L Y + Q
Sbjct: 459 KLLTDLTAYAAQLMQ 473
>gi|418513165|ref|ZP_13079396.1| exonuclease I [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|366082062|gb|EHN45999.1| exonuclease I [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
Length = 476
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 178/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSETLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|333893502|ref|YP_004467377.1| exodeoxyribonuclease I [Alteromonas sp. SN2]
gi|332993520|gb|AEF03575.1| exodeoxyribonuclease I [Alteromonas sp. SN2]
Length = 477
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 197/375 (52%), Gaps = 18/375 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY REW+N SRWD+I++ +A Y L P GI WP + +G PSFKLEHL+ N+
Sbjct: 110 LFYRNFYDPYSREWRNGNSRWDIIDLARACYALRPDGINWPTREDGTPSFKLEHLTKEND 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDALSDV AT+ LA+LI+ PRLF + SLR K V + +I+
Sbjct: 170 ISHENAHDALSDVHATIALAKLIKEKQPRLFEYAYSLRSKHNVANQFDLTKPSVLLHISA 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDIN---KIRDYLCFKKNSFK 177
+ + + PI HP N N +I + L P LLND K + Y ++ S
Sbjct: 230 KLPASQGCCTWIMPIAKHPTNSNAIIAVD-LSKPIDSLLNDSPEEIKAKLYARYEPGSDA 288
Query: 178 EDI--PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI 235
+ + +IH+NRSP V + K ++ + R D + +N + + + K+
Sbjct: 289 NSLRPGLKLIHINRSPFVTT-AKAMTEDNAHRLGLDRDTCLENYRI---LAQERDLGMKL 344
Query: 236 FLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
Y+ + D E +ID LY F+S +D + + SP++L + ++ L L+
Sbjct: 345 SNVYENDTDDKEQDIDHALYSGGFLSTEDRHWCDKVLASSPEQLGALAEETQHVGLRALL 404
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEH----- 349
F YRARNF TL+Y E +W+++R +R + ++ Y+ +L + A+EH
Sbjct: 405 FRYRARNFPSTLTYDETLKWQRHRQARLTDPTSSASITLEHYM--STLERLAHEHVDNPE 462
Query: 350 DTKILNALLMYGKSI 364
IL AL Y +++
Sbjct: 463 KQAILRALFQYAENL 477
>gi|147788|gb|AAA19938.1| exonuclease I [Escherichia coli]
Length = 466
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 194/370 (52%), Gaps = 23/370 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ +L I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFAL---------IDVPHMKPLVHVSG 225
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 226 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 285
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K IF +
Sbjct: 286 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKILRENPQEREKVVAIFAE 344
Query: 239 YK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 345 AEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 401
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LN 355
RARNF TL Y E +RW ++R F + + + E++ L+++ + K+ L
Sbjct: 402 RARNFPGTLDYAEQQRWLEHRRQVFTPEF-----LQGYADELQMLVQQYADDKEKVALLK 456
Query: 356 ALLMYGKSIT 365
AL Y + I
Sbjct: 457 ALWQYAEEIA 466
>gi|417384027|ref|ZP_12149532.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353610151|gb|EHC63217.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 476
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 178/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGIKRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|444377787|ref|ZP_21176995.1| Exodeoxyribonuclease I [Enterovibrio sp. AK16]
gi|443678158|gb|ELT84831.1| Exodeoxyribonuclease I [Enterovibrio sp. AK16]
Length = 474
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 190/370 (51%), Gaps = 18/370 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL++ ++A Y L P GI WP + G SFKLEHLS N +
Sbjct: 114 LYRNFFDPYGWSWQNGNSRWDLLDTMRAAYALRPEGIEWPENSEGNISFKLEHLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+ ++ + PRLF+++ + R K + I +P +++ M
Sbjct: 174 EHSNAHDAMADVHATIEMAKKLKTSQPRLFDYLYTYRNKNKLTPLIDVVSMKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F ++ S + P+ HP NKN +I +L DP D + +R+ L K D
Sbjct: 234 FGTERGNTSWVVPVAWHPENKNAVIAVDLARDPSPLFDLDTDALRERLYTKHTDLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
PI +IH+N+ P V++ K L R D +N+K + N + +K+
Sbjct: 294 PAPIKLIHINKCP-VLAEAKTLRPEDAARLGIDRQQCLENLK---KLQANPSVREKLVAL 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y N+D LY+ F S D + I+R P+ L+ ++ +++++ L+F Y
Sbjct: 350 YAEKPEYQSSGNVDAALYDGFFSPSDRSTMDIIRQTKPENLAALDIQVSDQRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT---KIL 354
RARN+ TLS E K+W +R ++ + Y N+ L +AN+ D KIL
Sbjct: 410 RARNYPATLSDSEQKKWHMHR-RDYFEAELPAYMANL------EALAEANQSDDKKFKIL 462
Query: 355 NALLMYGKSI 364
++ Y +S+
Sbjct: 463 KSVYHYVESL 472
>gi|431804244|ref|YP_007231147.1| exonuclease I [Pseudomonas putida HB3267]
gi|430795009|gb|AGA75204.1| exonuclease I [Pseudomonas putida HB3267]
Length = 477
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 195/372 (52%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N +
Sbjct: 110 LYRNFFDPYAREWQGGNSRWDLIDIVRTAYALRPDGIEWP-QQDGRTSLRLELLSKANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AH+ALSDVRAT+ LARLIR P+L++++ LR K V+ +I + +P +I+
Sbjct: 169 DHGHAHEALSDVRATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L + L +R L + E
Sbjct: 227 FSAARNYLGVVLPLAWHPRNRNALIVCDLHQETLPLLRESAEVLRRRLYTRHEELAEGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++ +NR P V++ L VL R DL + W+ L+
Sbjct: 287 PVPLKLVQVNRCP-VVAPLSVLRPADQQRLGLDLTLLQLR---GEELAEQQAQWQDK-LE 341
Query: 239 YKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ D + D E LY+ F+ +D +R++ P +LS+ + F++ +L EL+F
Sbjct: 342 HIYGKEDFAPSEDPEQQLYDGFLGDRDRRLCEQVRALEPAQLSHGQWMFDDLRLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYN-INMFYLEIESLLKKANEHDTKILN 355
YRARNF ETL+ +E +RW + R + + N + F + + A++ ++L+
Sbjct: 402 YRARNFPETLTGEERQRWFSFCQQRLSDPQWGAPNTLGDFEQARQQAWEGADDAGRRVLD 461
Query: 356 ALLMYGKSITQK 367
A ++ + + +
Sbjct: 462 AWQVHARQLQAQ 473
>gi|157145042|ref|YP_001452361.1| exonuclease I [Citrobacter koseri ATCC BAA-895]
gi|157082247|gb|ABV11925.1| hypothetical protein CKO_00773 [Citrobacter koseri ATCC BAA-895]
Length = 474
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 179/325 (55%), Gaps = 7/325 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ + R K + A I P +P +I+
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKSRQPRLFDYLYTHRNKHKLAALIDVPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDMSPLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + +N + K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVRDKVVAI 349
Query: 239 Y-KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F Y
Sbjct: 350 FAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRF 322
RARNF TL E +RW ++R F
Sbjct: 410 RARNFPGTLDETEQQRWLEHRRQVF 434
>gi|420373186|ref|ZP_14873346.1| exodeoxyribonuclease I [Shigella flexneri 1235-66]
gi|391317517|gb|EIQ74805.1| exodeoxyribonuclease I [Shigella flexneri 1235-66]
Length = 474
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 177/328 (53%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+N+ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ S R K + A I P +P +++
Sbjct: 174 IEHANAHDAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRARLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFAPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW +R F
Sbjct: 407 FNYRARNFPGTLDEGEQQRWLDHRRQVF 434
>gi|423140642|ref|ZP_17128280.1| exonuclease [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379053196|gb|EHY71087.1| exonuclease [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 474
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 177/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 234 MFGAWRGNTSWIAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+PI ++H+N+ P V++ L R N+K + N + K I
Sbjct: 294 AVPIKLVHINKCP-VLAQANALRPEDADRLGIHRQHCLDNLKV---LRENPQVRDKVVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW +R
Sbjct: 407 FNYRARNFPGTLDDAEQQRWLAHR 430
>gi|389796637|ref|ZP_10199688.1| exonuclease I [Rhodanobacter sp. 116-2]
gi|388448162|gb|EIM04147.1| exonuclease I [Rhodanobacter sp. 116-2]
Length = 481
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 191/377 (50%), Gaps = 15/377 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
M +RN PY REW+N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N
Sbjct: 108 MLYRNFYEPYGREWENGNSRWDLIDLVRMCQALRPEGIVWPTREDGSPSFKLEHLASANQ 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+ ++AHDALSDV A + LARLIR PRL+++ LR+K+ V + P +++
Sbjct: 168 LTQERAHDALSDVHALIELARLIRVRQPRLWDWYYGLRRKQKVFELLDVVNMTPLVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++++ P+ HP +I ++L DP +L D ++I D + + ED
Sbjct: 228 RYPASRHCLAVIAPLAAHPSRAGEVIVYDLATDPATWLALDEDEIADRIFTARTDLPEDV 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ + N +P ++ L VL + R + DL + + ++ +++F
Sbjct: 288 ERIPLRTVRANHAP-ALAPLSVLQGADLDRLQLDLARCQAHREVLHAVDGLAEKLRRVFQ 346
Query: 238 DYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ L D EL F+ D LA +R+ P++L F F + + EL+
Sbjct: 347 ----RAAALPPPEDPELALYGGGFLPDADKRLLAQVRATPPQELGTRAFPFRDPRYPELL 402
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESLLKKANEHDT- 351
F YRARN+ ETL E RW+ +R +R + L + + ++ + L + D
Sbjct: 403 FRYRARNWPETLDADEHARWENFRRARL-TRHTPLTGLTLDDYFARLGELRRDPAVQDKL 461
Query: 352 KILNALLMYGKSITQKI 368
+L+ L +G+ + +
Sbjct: 462 PLLDQLQAWGEQLAASV 478
>gi|343506929|ref|ZP_08744386.1| exonuclease I [Vibrio ichthyoenteri ATCC 700023]
gi|342800965|gb|EGU36458.1| exonuclease I [Vibrio ichthyoenteri ATCC 700023]
Length = 474
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 200/370 (54%), Gaps = 19/370 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFFDPYAWSWQNGNSRWDLLDVMRACHALRPEGIEWPENDEGYISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ L++R K+ + + P +++ M
Sbjct: 175 HANAHDAMADVIATIELAKKIKAAQPKLFDYFLTMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP N+N I +L DP+ L D ++ L K + D
Sbjct: 235 GRECNYTSWIVPVAWHPTNQNAAIVVDLAKDPQVLLDLDAEALKQRLYTKHSDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D +N++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENADKIGIDREQCLQNLQV---IRQHPEIREKLIGLF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D +LY+ F S D + I+R P+ L+ ++ F + ++E L+F YR
Sbjct: 351 TTDREYEKSTDVDTQLYDGFFSPADRAAMDIIRQTEPEHLAALDITFSDARIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL+ +E +RW + F ++ I+ + L E+L+ + +E DTK + L
Sbjct: 411 ARNFPWTLTEQEQQRWSNHCQDYFQSR------IDEYMLNFENLVHE-HESDTKKITLL- 462
Query: 359 MYGKSITQKI 368
KS+ Q +
Sbjct: 463 ---KSVYQYV 469
>gi|90409311|ref|ZP_01217406.1| putative exonuclease I, partial [Psychromonas sp. CNPT3]
gi|90309579|gb|EAS37769.1| putative exonuclease I [Psychromonas sp. CNPT3]
Length = 361
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 181/321 (56%), Gaps = 14/321 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PY+REWKN SRWD+I++++A Y L P GI WP N+ PSF+LE LS N L+
Sbjct: 1 YRNFADPYQREWKNGNSRWDIIDLVRACYALRPEGINWPVDNDDVPSFRLELLSKENALA 60
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H +AHDA+SDV AT+ +A+LI+ P+L+N+ +LR KK VL + P +++ MF
Sbjct: 61 HDQAHDAMSDVYATIAVAKLIKEKQPKLYNYYFNLRNKKTVLETLKVGSFTPLMHVSGMF 120
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI-- 180
+ IS + PIC+HP NKN +I +L D + +IR Y+ K E I
Sbjct: 121 PALQGCISYILPICMHPTNKNAVIVVDLAKDLTNLESLSVEQIRQYMYSKTIDLPEGITR 180
Query: 181 -PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS---ILNNTYIWKKIF 236
+ +IHLN+ P V S K LS + D I+C S I N + K++
Sbjct: 181 PALKLIHLNKCPFV-SPAKTLSESRADELGID------RIQCRKSLNFIKENLALVDKLY 233
Query: 237 LDYKINNSDLE-LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
Y ++ + L +E LY+ F +++D ++ ++ + + L+N F F + +L+ L++
Sbjct: 234 AVYNTAHAPKQGLCAEEMLYHGFFNQEDKQQIEDVKHSNWQVLANKTFHFNDARLKTLLW 293
Query: 296 LYRARNFIETLSYKELKRWKK 316
YRARN ET+S +E +W +
Sbjct: 294 HYRARNAPETMSEEEQDKWAR 314
>gi|86146813|ref|ZP_01065133.1| exonuclease I [Vibrio sp. MED222]
gi|218709702|ref|YP_002417323.1| exonuclease I [Vibrio splendidus LGP32]
gi|85835463|gb|EAQ53601.1| exonuclease I [Vibrio sp. MED222]
gi|218322721|emb|CAV18897.1| Exodeoxyribonuclease I [Vibrio splendidus LGP32]
Length = 474
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 194/362 (53%), Gaps = 12/362 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRAVHALRPEGIVWPENEEGYPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P++F+++ ++R K+ + + P +++ MF
Sbjct: 175 HENAHDAMADVIATIELAKKLKAAQPKMFDYLYNMRHKRKLNDLVDIVNMTPLMHVSGMF 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+Y S + P+ HP N+N +I +L DP L D +++RD L K++ ED
Sbjct: 235 GRDCNYTSWIVPMAWHPTNQNAVIVVDLAKDPSPLLELDADELRDRLYTKRSELSEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++ LN+ PI ++ K L++ D KN+ + + + I +K+ Y
Sbjct: 295 VPIKLVQLNKCPI-LAPAKTLTAENAETIGIDRQQCLKNL---ALLREHPEIREKLIGLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ ++D LY+ F S D + I+R P L+ ++ F +++++ L+F YR
Sbjct: 351 SQEREYEKSDDVDTHLYDGFFSPADKTAMNIIRETDPNNLAALDITFSDERIKPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL E +W + FY + Y +N+ L E +++E IL A+
Sbjct: 411 ARNFPWTLDEAEQLKWANH-CREFYECRLEEYMLNLENLAHE---HESDEKKMAILKAVY 466
Query: 359 MY 360
Y
Sbjct: 467 QY 468
>gi|149190027|ref|ZP_01868305.1| exonuclease I [Vibrio shilonii AK1]
gi|148836193|gb|EDL53152.1| exonuclease I [Vibrio shilonii AK1]
Length = 473
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 182/336 (54%), Gaps = 9/336 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 114 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 173
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 174 HENAHDAMADVIATIELAKKVKAAQPKLFDYFYSMRQKRKLNELVDIVNMTPLMHVSGML 233
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D++ + L + + D
Sbjct: 234 GKECQYTSWVVPIAWHPTNQNAVIVADLAKDPQPLLDLDVDALHQRLYTRHDELAPDEKP 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +IHLN+ PI ++ K L++ D KN+ + I + I +K+ Y
Sbjct: 294 VPLKLIHLNKCPI-LAPAKTLTAENAESIGIDREQCLKNL---ALIKQHPEIREKLIGLY 349
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + + ++D +LY+ F S D + I+R P LS ++ F + ++E L+F YR
Sbjct: 350 SIEREFENDGDVDTQLYSGFFSPADKSAMDIIRETDPNNLSALDISFSDPRIEPLLFRYR 409
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM 334
ARNF +L E RW + F+ + Y +NM
Sbjct: 410 ARNFPWSLDETEQARWANH-CREFFESRIESYMLNM 444
>gi|85059110|ref|YP_454812.1| exonuclease I [Sodalis glossinidius str. 'morsitans']
gi|84779630|dbj|BAE74407.1| exonuclease I [Sodalis glossinidius str. 'morsitans']
Length = 473
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 203/378 (53%), Gaps = 32/378 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ S WDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYGWSWQQGNSCWDLLDVVRACYALRPNGIEWPLNDDGLPSFRLEHLTRANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV ATL +A+L+R P+LF+++ R K+ + + + +P +++
Sbjct: 174 IEHANAHDAMADVYATLAMAKLMRQAQPKLFDYLYRHRGKRQLKSLVDIATMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + + + P+ HP N N LI +L D + D + +R L ++++ ++
Sbjct: 234 MFGAARGNTAWIAPLAWHPDNPNALIVCDLSGDMQVLADLDSDALRTRLYTRRDALGDNT 293
Query: 180 -IPISMIHLNRSPIVIS--NLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+P+ +++LN+ P++ L+ + + + + +C + N T++ +
Sbjct: 294 AVPLKLVYLNKCPVLAPANTLQPMDAERL---------GIQRQRC---LDNLTWLRARPE 341
Query: 237 LDYKI----------NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFE 286
L K+ +SD ++D +LY+ F S D + I+ + +P+ L ++ F
Sbjct: 342 LREKVVALFAESAPFKSSD---DVDAQLYDGFFSDADRAAMEIILATAPENLPALDISFV 398
Query: 287 NKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKA 346
+ +L+ L+F YRARNF TL + E RW ++R +RF + Y + LE L +
Sbjct: 399 DARLKPLLFRYRARNFPHTLDHNEQLRWLEHRKTRFTQPRLEAY---VQQLETLYLAHEG 455
Query: 347 NEHDTKILNALLMYGKSI 364
+EH T++L AL Y +++
Sbjct: 456 DEHKTRLLRALFEYLQTL 473
>gi|149912138|ref|ZP_01900724.1| putative exonuclease I [Moritella sp. PE36]
gi|149804786|gb|EDM64828.1| putative exonuclease I [Moritella sp. PE36]
Length = 480
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 192/369 (52%), Gaps = 15/369 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY WK+ SRWD+I++++A Y L P GI WP ++G PS +LE L+ N
Sbjct: 119 IFYRNFYDPYAHTWKDGNSRWDIIDLMRACYALRPEGIVWPENDDGLPSMRLELLTKANG 178
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA SDV AT+ +A+L++ P+LF+F+ +LR K+ V + I P +++
Sbjct: 179 IEHANAHDATSDVYATIAMAKLVKEKQPKLFDFLFNLRSKRKVESLIDIINMTPLVHVSG 238
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + + S + P+ HP N N +I +L D L +++R+ L K +
Sbjct: 239 MFGADRGFTSWVVPLAWHPTNNNAVIVADLAQDITPLLELSADELRERLYTPKKDLGDLA 298
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKKI 235
IP+ +IH+N+ P++ +L N R D N N +K ++++ N ++
Sbjct: 299 PIPLKLIHINKCPVLAPAKTLLPENAE-RLGIDRNACLANLKRLKESATLRENVVGVYQV 357
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+Y +N N+D +Y+ F S D ILR +P++L + +++ EL F
Sbjct: 358 DREYPKSN-----NVDAMIYDGFFSAGDKANFEILRETAPEQLVGLQLKISDERFNELFF 412
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARNF LS E ++W + S + ++ L+ ++ +E K+L
Sbjct: 413 RYRARNFPHLLSMPEQQKWLNHCRSVLEDSAPAYFD----RLDALAIENSHDERKMKLLQ 468
Query: 356 ALLMYGKSI 364
L +YG++I
Sbjct: 469 QLYLYGQTI 477
>gi|283785833|ref|YP_003365698.1| exodeoxyribonuclease I [Citrobacter rodentium ICC168]
gi|282949287|emb|CBG88898.1| exodeoxyribonuclease I [Citrobacter rodentium ICC168]
Length = 474
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 182/328 (55%), Gaps = 13/328 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 ILYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L+++ PRLF+++ + R K + A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAQLVKSRQPRLFDYLYTHRNKDKLAALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISSLLELDSDTLRERLYTAKADLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
IP+ ++H+N+ P V++ L R + N+K + +N + K I
Sbjct: 294 AIPLKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRDNPQVRDKAVAI 349
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LYN F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 350 FAEAEPFIPSD---NVDTQLYNGFFSDADRAAMKIVLETEPQNLPALDITFVDKRIEKLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRF 322
F YRARNF TL E +RW ++R F
Sbjct: 407 FNYRARNFPGTLDEAEQQRWLEHRRQVF 434
>gi|331004853|ref|ZP_08328270.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC1989]
gi|330421307|gb|EGG95556.1| Exodeoxyribonuclease I [gamma proteobacterium IMCC1989]
Length = 476
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 195/371 (52%), Gaps = 18/371 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWD+I++++ Y L P + WP ++G SFKLE LS N L
Sbjct: 109 LYRNFYDPYEREWQNGNSRWDIIDMVRLCYALRPETLCWPTNDSGVVSFKLELLSKANGL 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDV AT+ LA+LI+ P L+ + SLR K V A + +P +++
Sbjct: 169 LHDAAHDALSDVYATIALAKLIKQKQPELYQYAYSLRDKNKVKALMNVAQRKPILHVSSR 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F LM P+ HP NKN +I ++L DP L +I + L K+ E
Sbjct: 229 FPVSRGCAGLMLPLAEHPTNKNSVIAYDLSEDPTPLLELSAEEIAERLYVKQADLPEGAS 288
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFD---LNCAFKNIKCA--SSILNNTYIWK 233
IP+ IH N+SP+V + +K+L R D ++ ++ A +S L + + +
Sbjct: 289 RIPLKEIHFNKSPMV-ATVKLLDDQSAQRLGIDKSTCEAHWQQLRAADITSKLQDVFSTQ 347
Query: 234 KIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ + + +++LY+ FI+ D + +R P+ LS+ + ++ +L+ L
Sbjct: 348 RFPPKH---------DPEQQLYDGFINSHDKHLMLAIRGAEPETLSHYSSQLKDPRLKAL 398
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
+F YRAR++ +TL+ E ++W+++ SR ++ + Y E S E + +I
Sbjct: 399 LFRYRARHYPQTLNELEKQQWQEWVYSRLTDETAGASIVLDEYFERLSAYTDDIEANQQI 458
Query: 354 LNALLMYGKSI 364
++ LL YG +I
Sbjct: 459 VDDLLAYGDAI 469
>gi|375265284|ref|YP_005022727.1| exonuclease I [Vibrio sp. EJY3]
gi|369840605|gb|AEX21749.1| exonuclease I [Vibrio sp. EJY3]
Length = 473
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 198/368 (53%), Gaps = 15/368 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEEGFPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRQKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNTVITIDLAKDPQPILELSAEELHERLYTKREDLGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ + + I +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLNNLAL---LRQHPEIREKLISLFS 350
Query: 241 INNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
+ + + ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F YRA
Sbjct: 351 VERTFEKSDDVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--LNAL 357
RNF TL +E +RW ++ F ++ I + L +E+L+ + + KI L ++
Sbjct: 411 RNFPGTLDEQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKIALLKSV 464
Query: 358 LMYGKSIT 365
Y +S+
Sbjct: 465 YRYVESLA 472
>gi|417511769|ref|ZP_12176289.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353641957|gb|EHC86539.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
Length = 476
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 178/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENCNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E +RW ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQRWLEHR 432
>gi|389783308|ref|ZP_10194741.1| exonuclease I [Rhodanobacter spathiphylli B39]
gi|388434822|gb|EIL91751.1| exonuclease I [Rhodanobacter spathiphylli B39]
Length = 481
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 197/379 (51%), Gaps = 19/379 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
M +RN PY REW+N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N
Sbjct: 108 MLYRNFHEPYGREWENGNSRWDLIDLVRMCQALRPEGIVWPTREDGSPSFKLEHLARANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+ ++AHDALSDV A + LARLIR PRL+++ +LR+K+ V + P +++
Sbjct: 168 LNQERAHDALSDVYALIDLARLIRVRQPRLWDWHYALRRKQKVFELLDVVNMTPLVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++++ P+ HP +I ++L DP +L D ++I D + + E
Sbjct: 228 RYPASRHCLTVVAPLAAHPSRAGEVIVYDLATDPAAWLALDEDEIADRIFTPRADLPEGV 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NC-AFKNIKCASSILNNTYIWKKI 235
IP+ + N +P ++ L VL + R + DL C A +++ A++ L +++
Sbjct: 288 ERIPLRTVRANHAP-ALAPLSVLQGVDLARLQLDLPRCQAHRDMLHAAAGLPEKL--RRV 344
Query: 236 FLDYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
F ++L D EL F+ D LA +R+ P +L + F F + + E
Sbjct: 345 FQ----RAAELPPPEDPELALYGGGFLPDADKRLLAQVRATPPAELGSRPFPFRDARYPE 400
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESLLKKANEHD 350
L+F YRARN+ ETL E RW+++R +R + L + + ++ I L D
Sbjct: 401 LLFRYRARNWPETLDADERLRWERFRQARL-TRHTPLTGLTLDDYFARIAKLRGDPQAQD 459
Query: 351 T-KILNALLMYGKSITQKI 368
+L+ L +G+ + +
Sbjct: 460 RLGLLDQLQAWGEQLADSL 478
>gi|407072323|ref|ZP_11103161.1| exonuclease I [Vibrio cyclitrophicus ZF14]
Length = 474
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 192/362 (53%), Gaps = 12/362 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRAVHALRPEGIVWPENEEGYPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P++F+++ S+R K+ + + P +++ MF
Sbjct: 175 HENAHDAMADVIATIELAKKLKAAQPKMFDYLYSMRHKRKLNELVDIVNMTPLMHVSGMF 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+Y S + P+ HP N+N +I +L DP L D + +R+ L K++ ED
Sbjct: 235 GRDCNYTSWIVPMAWHPTNQNAVIVVDLAKDPSPLLELDSDALRERLYTKRSELGEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++ LN+ PI ++ K L++ D KN+ + + I +K+ Y
Sbjct: 295 VPIKLVQLNKCPI-LAPAKTLTAENAETIGIDRQQCLKNLAL---LREHPEIREKLIGLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ ++D LY+ F S D + I+R P L+ ++ F +++++ L+F YR
Sbjct: 351 SQEREYEKSDDVDTHLYDGFFSPGDKTAMDIIRQTDPNNLAALDITFGDERIKPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
AR+F TL E +W + FY + Y +N+ L E +++E IL A+
Sbjct: 411 ARHFPWTLDEAEQLKWANH-CREFYESRLEEYMLNLENLAHE---HESDEKKMAILKAVY 466
Query: 359 MY 360
Y
Sbjct: 467 QY 468
>gi|91223947|ref|ZP_01259211.1| exodeoxyribonuclease I [Vibrio alginolyticus 12G01]
gi|91191439|gb|EAS77704.1| exodeoxyribonuclease I [Vibrio alginolyticus 12G01]
Length = 473
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 201/371 (54%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVVATIEMAKKVKAAQPKLFDYFFSMRQKRKLNDLVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ E +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + + I +K+
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLANL---ALLRQHPEIREKLISLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ K + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 351 VERKFDKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRARNF TL +E +RW + F ++ I + L +E+L+ +++E IL
Sbjct: 408 YRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAIL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|219870303|ref|YP_002474678.1| exonuclease I [Haemophilus parasuis SH0165]
gi|219690507|gb|ACL31730.1| exonuclease I [Haemophilus parasuis SH0165]
Length = 457
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 190/371 (51%), Gaps = 14/371 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE WKN SRWDL++V++A Y L P GI W Y + G PSFKLE+L+ N +
Sbjct: 52 FFRNFFDPYEYSWKNGNSRWDLLDVVRACYALRPEGIEWAYDDEGMPSFKLENLTKANGI 111
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA++DV AT+ +A+LI+ P+LF+F L R KK + I P +++ M
Sbjct: 112 AHDNAHDAMADVYATIAMAKLIKQKQPKLFDFFLQNRGKKALEEMIDVGEMTPLVHVSGM 171
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + P+ HP N+N +I +L + L +R+ L KK +
Sbjct: 172 LGNYRGNTAWVVPLAWHPTNRNAVIVCDLSGNINDLLNEPSEILRERLYTKKAELEAQGL 231
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D +N+K S N + ++ L
Sbjct: 232 YTVPLKLVHINKCPILAPAKTLLPENAT-RLGIDRLACLENLKRLKSQKN---LVREKVL 287
Query: 238 D--YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
D + N NI+ LY+ F D +AILRS+ P++L++ F + ++E L+F
Sbjct: 288 DIFSEERNYPTSNNIETTLYDGFFEPADKNNMAILRSLKPEELAHHGLKFSDPRIEPLLF 347
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRAR++ ETL+ E RW+KY + K +++ S N K+L
Sbjct: 348 HYRARHYAETLTRAEQVRWQKYCYQQLEAKAEAFEQA----VDLLSAQYHDNPDKIKLLT 403
Query: 356 ALLMYGKSITQ 366
L Y + Q
Sbjct: 404 DLTAYAAQLMQ 414
>gi|148975895|ref|ZP_01812684.1| exonuclease I [Vibrionales bacterium SWAT-3]
gi|145964640|gb|EDK29893.1| exonuclease I [Vibrionales bacterium SWAT-3]
Length = 474
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 194/362 (53%), Gaps = 12/362 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRAVHALRPDGIVWPENEEGFPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P++F+++ ++R K+ + + P +++ MF
Sbjct: 175 HENAHDAMADVIATIELAKKLKAAQPKMFDYLYNMRHKRKLNELVDIVNMTPLMHVSGMF 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+Y S + P+ HP N+N +I +L DP L D +++R+ L K++ ED
Sbjct: 235 GRDCNYTSWIVPMAWHPTNQNAVIVVDLAKDPSPLLELDADELRERLYTKRSDLNEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++ LN+ PI ++ K L++ D KN+ + + I +K+ Y
Sbjct: 295 VPIKLVQLNKCPI-LAPAKTLTAENAETIGIDRQQCLKNLAI---LREHPEIREKLIGLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ ++D +LY+ F S D + I+R P L+ ++ F +++++ L+F YR
Sbjct: 351 SQEREYEKSDDVDTQLYDGFFSPADKTAMNIIRETDPNNLAVLDITFSDERIKPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL E +W + FY + Y +N+ L E +++E IL A+
Sbjct: 411 ARNFPWTLDESEQLKWANH-CREFYESRLEEYMLNLENLAHE---HESDEKKMAILKAVY 466
Query: 359 MY 360
Y
Sbjct: 467 QY 468
>gi|418858886|ref|ZP_13413495.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418863645|ref|ZP_13418183.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392831125|gb|EJA86759.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392833513|gb|EJA89128.1| exonuclease I [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 476
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 178/324 (54%), Gaps = 13/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + K I
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
F + + SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRARNF TL E + W ++R
Sbjct: 409 FNYRARNFPGTLDDAEQQSWLEHR 432
>gi|87121491|ref|ZP_01077380.1| exodeoxyribonuclease I [Marinomonas sp. MED121]
gi|86163334|gb|EAQ64610.1| exodeoxyribonuclease I [Marinomonas sp. MED121]
Length = 457
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 202/369 (54%), Gaps = 9/369 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PY REW+N CSRWD+I++++ Y + P GI WP +G+ S KLE L+ N++
Sbjct: 88 FYRNFIDPYAREWQNACSRWDIIDLVRMCYAIRPEGINWPKNEDGQVSLKLEDLTKANDI 147
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H++AHDALSDV T+ +A+LI+ P+L+++ +R+K + I +PF +++ M
Sbjct: 148 AHEQAHDALSDVYGTIEMAKLIKQKQPKLYDYYFKMREKGELQKFIDPYRMKPFLHVSGM 207
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + +Y + + PI HP NKN +I ++L+ D + + +++IR + K + +
Sbjct: 208 FGAIKNYAAFVAPIAPHPTNKNGVILFDLMQDAQPLIDLSVDEIRHRVFSTKEALGDTPR 267
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +H NRSP V + ++++ R D +N+ S ++F+
Sbjct: 268 LPLKTLHYNRSPAVAPATFLKDTSVVSRLNLDGEICRQNLAILKSYPELANKMSQVFMQ- 326
Query: 240 KINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
++ ++ + D LY F S++D ++ +R LS ++ F++++L E++ Y
Sbjct: 327 --SHEKIDKDPDVMLYSGGFFSREDKARMEEIRQTPLNALSELSLSFDDRRLPEMLMRYI 384
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLKKANEHDTK--ILN 355
RN+ E L+ + + W++YR ++ + ++ F+ + L ++ +K +L
Sbjct: 385 GRNYPEQLTSTQRQEWEEYRQAKLLDPSAGASICMDAFFNRLNELAQETELSKSKQIMLQ 444
Query: 356 ALLMYGKSI 364
L Y +SI
Sbjct: 445 DLADYAQSI 453
>gi|21231005|ref|NP_636922.1| exonuclease I [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66768990|ref|YP_243752.1| exonuclease I [Xanthomonas campestris pv. campestris str. 8004]
gi|21112628|gb|AAM40846.1| exodeoxyribonuclease I [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574322|gb|AAY49732.1| exodeoxyribonuclease I [Xanthomonas campestris pv. campestris str.
8004]
Length = 481
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 192/375 (51%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANAV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQSQPKLWDYALRLRDKRFAASLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPATRLCAAAVLPLSRHPRIDSRVIVFDLDGDPDALLRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + S + + ++ A K A + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWQHLRSDDFQ---RLGVDRAAVEAKAARLRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D L +RS +P +L + F + +L EL+F
Sbjct: 347 YGAERAGAAAVNDADASLYDGFLAEGDKRLLTQVRSSAPGELGAMEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS E +RW YR R + + FY +I L + TK +
Sbjct: 407 YRARNWPQTLSPHEHQRWNDYRRQRLLEDRGLGEVTLEQFYAQIADLRLAHPDDATKQSL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|343511802|ref|ZP_08748955.1| exonuclease I [Vibrio scophthalmi LMG 19158]
gi|342797110|gb|EGU32766.1| exonuclease I [Vibrio scophthalmi LMG 19158]
Length = 474
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 201/370 (54%), Gaps = 19/370 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFFDPYAWSWQNGNSRWDLLDVMRACHALRPEGIEWPENDEGYISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ L++R K+ + + P +++ M
Sbjct: 175 HANAHDAMADVIATIELAKKIKAAQPKLFDYFLTMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP NKN +I +L DP+ D N +++ L K + D
Sbjct: 235 GRECNYTSWIVPVAWHPTNKNAVIVVDLAKDPQVLFDLDENALKERLYTKHSDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D +N++ + + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENADKIGIDREQCLQNLQV---LRQHPEIREKLIGLF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D +LY+ F S D + I+R P+ L+ ++ F + ++E L+F YR
Sbjct: 351 AVEREYEKSADVDTQLYDGFFSPADRAAMDIVRQTEPEHLAALDITFSDARIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL+ +E RW + F ++ ++ + L E+L+ + +E DTK + L
Sbjct: 411 ARNFPWTLTEQEQLRWNSHCQDYFQSR------MDEYMLNFENLVHE-HESDTKKITLL- 462
Query: 359 MYGKSITQKI 368
KS+ Q +
Sbjct: 463 ---KSVYQYV 469
>gi|332161149|ref|YP_004297726.1| exonuclease I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665379|gb|ADZ42023.1| exonuclease I [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 476
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 192/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDIADMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEAQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW ++R +K + + L++E+L + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRREALNPEK-----VQDYVLQLEALYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|451977563|ref|ZP_21927642.1| exonuclease family [Vibrio alginolyticus E0666]
gi|451929594|gb|EMD77332.1| exonuclease family [Vibrio alginolyticus E0666]
Length = 473
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 201/371 (54%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRQKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ E +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + + I +K+
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLANL---ALLRQHPEIREKLISLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ K + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 351 VERKFDKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRARNF TL +E +RW + F ++ I + L +E+L+ +++E IL
Sbjct: 408 YRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAIL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|254228381|ref|ZP_04921808.1| exonuclease family [Vibrio sp. Ex25]
gi|262394467|ref|YP_003286321.1| exodeoxyribonuclease I [Vibrio sp. Ex25]
gi|151939187|gb|EDN58018.1| exonuclease family [Vibrio sp. Ex25]
gi|262338061|gb|ACY51856.1| exodeoxyribonuclease I [Vibrio sp. Ex25]
Length = 473
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 200/371 (53%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRQKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ E +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + I +K+
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLANLAL---LRQHPEIREKLISLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ K + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 351 VERKFDKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRARNF TL +E +RW + F ++ I + L +E+L+ +++E IL
Sbjct: 408 YRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAIL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|343516704|ref|ZP_08753736.1| exonuclease I [Vibrio sp. N418]
gi|342795762|gb|EGU31471.1| exonuclease I [Vibrio sp. N418]
Length = 474
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 201/370 (54%), Gaps = 19/370 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN +PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFFDPYAWSWQNGNSRWDLLDVMRACHALRPEGIEWPENDEGYISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ L++R K+ + + P +++ M
Sbjct: 175 HANAHDAMADVIATIELAKKIKAAQPKLFDYFLTMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP NKN +I +L DP+ D + +++ L K + D
Sbjct: 235 GRECNYTSWIVPVAWHPTNKNAVIVVDLAKDPQVLFDLDGDALKERLYTKHSDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D +N++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENADKIGIDREQCLQNLQV---IRQHPEIREKLIGLF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D +LY+ F S D + I+R P+ L+ ++ F + ++E L+F YR
Sbjct: 351 AVEREYEKSADVDTQLYDGFFSPADRAAMDIVRQTEPEHLAALDITFSDARIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL+ +E RW + F ++ ++ + L E+L+ + +E DTK + L
Sbjct: 411 ARNFPWTLTEQEQLRWNSHCQDYFQSR------MDEYMLNFENLVHE-HESDTKKITLL- 462
Query: 359 MYGKSITQKI 368
KS+ Q +
Sbjct: 463 ---KSVYQYV 469
>gi|389794799|ref|ZP_10197944.1| exonuclease I [Rhodanobacter fulvus Jip2]
gi|388431775|gb|EIL88821.1| exonuclease I [Rhodanobacter fulvus Jip2]
Length = 482
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 191/377 (50%), Gaps = 15/377 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
M +RN PY REW+N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N
Sbjct: 108 MLYRNFYEPYGREWENGNSRWDLIDLVRLCQALRPEGIVWPTREDGSPSFKLEHLAQANQ 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L ++AHDALSDV A + LARLIR PRL+++ +LR+K+ V + P +++
Sbjct: 168 LKQERAHDALSDVYALIDLARLIRVRQPRLWDWYYALRRKQKVFELLDVVNRTPMVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++L+ P+ HP +I ++L DP ++L D + I D + + E
Sbjct: 228 RYPASRHCLALIVPLAAHPARPGEIIVYDLATDPAEWLALDEDDIADRIFTARADLPEGI 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ I N +P ++ L VL M R + D++ + ++ +++F
Sbjct: 288 ERIPLRTIRANHAP-ALAPLSVLQGVDMTRLQLDVDRCLAHRDVLHAVDGLAEKLRRVFQ 346
Query: 238 DYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
S L D EL F+ D LA +R+ P++L F F + + EL+
Sbjct: 347 ----RASALPPPEDPELALYGGGFLPDADKRLLAQVRATPPEQLGERAFPFRDARYPELL 402
Query: 295 FLYRARNFIETLSYKELKRWKKY---RISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
F YRARN+ +TL E +RW+++ R++R + L + F E A +
Sbjct: 403 FRYRARNWPDTLDADERERWRQFCHDRLTR-HTALTGLTLDDYFARLAELRADPATQGKL 461
Query: 352 KILNALLMYGKSITQKI 368
+++ L +G+ +T +
Sbjct: 462 ALIDQLQAWGEQLTPDL 478
>gi|269966310|ref|ZP_06180397.1| exodeoxyribonuclease I [Vibrio alginolyticus 40B]
gi|269829049|gb|EEZ83296.1| exodeoxyribonuclease I [Vibrio alginolyticus 40B]
Length = 473
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 200/371 (53%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R+K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVVATIEMAKKVKAAQPKLFDYFFSMRQKRKLNDLVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ E +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + I +K+
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLANLAL---LRQHPEIREKLISLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ K + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 351 VERKFDKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRARNF TL +E +RW + F ++ I + L +E+L+ +++E IL
Sbjct: 408 YRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAIL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|381152874|ref|ZP_09864743.1| exonuclease I [Methylomicrobium album BG8]
gi|380884846|gb|EIC30723.1| exonuclease I [Methylomicrobium album BG8]
Length = 493
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 189/367 (51%), Gaps = 13/367 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWDLI+V++A L P G+ WP+ ++G P+ +L+ L+ N L
Sbjct: 111 LYRNFYDPYAREWQHGNSRWDLIDVVRAARALRPDGLAWPFNDDGTPTLRLDRLTVANGL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDALSDV+AT+ LA+L+ P+L+ F+ R K L + P +++
Sbjct: 171 VHEAAHDALSDVKATIALAQLLSRAQPKLYPFLFRHRVKAEALKLLQIGSFEPVVHVSGK 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + ++++ P+ HP N N +I +++ DP L +IR + E
Sbjct: 231 YPASRHCLAVVLPVAWHPSNGNGVIVYDVSIDPGPMLELSAAEIRRRIFTAAEDLPEGET 290
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+ P V++ + V+ R DL +I + + +KI
Sbjct: 291 RIPLKTVHLNKCP-VLAPVSVIRGQDAERLAIDLAACRAHIAKIKAAAG---LAEKIVQV 346
Query: 239 YKINNSDLELNIDEEL---YNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ N D E D +L F + +D K+A LRSMSP +L+ F +++L E++F
Sbjct: 347 FDAEN-DFETETDPDLAIYQGGFFTDEDKRKMAKLRSMSPGQLAETTLTFTDRRLSEMLF 405
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNK-KNNLYNINMFYLEIESLLKKANEHDTKIL 354
YRARN+ ++L+ +E RW+++ R + + ++ +E+L + D I+
Sbjct: 406 RYRARNYPDSLNAEETARWQQFCADRLSGRIPGAGITFDRYFARLEALRNDVSA-DRSIV 464
Query: 355 NALLMYG 361
AL Y
Sbjct: 465 AALQSYA 471
>gi|451945801|ref|YP_007466396.1| exonuclease I [Desulfocapsa sulfexigens DSM 10523]
gi|451905149|gb|AGF76743.1| exonuclease I [Desulfocapsa sulfexigens DSM 10523]
Length = 478
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 191/363 (52%), Gaps = 11/363 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW+N SRWD+I++++ L P GI WP G SF+LE L+ N++
Sbjct: 110 LYRNFYDPYAREWRNGNSRWDIIDMLRLTRALRPEGIEWPTNEEGVTSFRLEDLTRANSI 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH+ AHDALSDV AT+ LARLIR P+L+N++ +R K+ V + + +++ M
Sbjct: 170 SHEGAHDALSDVHATIELARLIRTRQPKLYNYLFDMRDKRKVGSNLNIQEQLVVLHVSSM 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ +K IS + P+ HP+NKN +I ++L HDP L +++I+ L + E
Sbjct: 230 YPAKQGCISPVIPLAAHPINKNGIIVYDLRHDPSPLLTLAVDEIKKRLFTRSEDLPEGVE 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ IHLN+SP+V+ + L+ + +L + K + + + +++ D
Sbjct: 290 RIPLKTIHLNKSPVVVP-MSTLTPEAAECWGINLKNIETHAKQLRGLPDLSRKLQQVHGD 348
Query: 239 YKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + D+ LY F S +D + + MS L+ FE+ +L E++F Y
Sbjct: 349 QQFPPI---TDPDQNLYGGGFFSDRDRALMEDIHDMSINDLAKTRMKFEDPRLSEMLFRY 405
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFY---LEIESLLKKANEHDTKIL 354
RARN+ +LS +E RW +R +R N + Y L + + E + KI+
Sbjct: 406 RARNWPHSLSQEERVRWNTFRHNRVTNPDADCGITLSEYRKQLAKKVMQPDVKERERKII 465
Query: 355 NAL 357
+AL
Sbjct: 466 SAL 468
>gi|424794541|ref|ZP_18220498.1| Exodeoxyribonuclease I [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795905|gb|EKU24514.1| Exodeoxyribonuclease I [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 479
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 191/373 (51%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL+++++ + L P GI WP + +G SFKLE L+ N +
Sbjct: 110 LFRNFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+ARL R + PRL+++ L LR K++ + +P +++
Sbjct: 170 RDGDAHEALSDVHATIGMARLFREHQPRLWDYALKLRDKRFCGGLLDVVAMQPVLHVSMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + ++ ++L D + L +I D L + E
Sbjct: 230 YPAARLCAAPVLPLARHPRIDSRVLVFDLEGDIEPLLRYTPEQIADRLYTPQADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + + + L+ A K A + +K+
Sbjct: 290 RIPLKEVHLNKTPALVAWSHLRDPDFA---RLQLDPAQILAKAARLREAGPELAEKVRRV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D LY+ F++ D +A +R+ P +L+ + F + +L EL+F YR
Sbjct: 347 FGNERASATADVDASLYDGFLADTDKRAMAQVRATPPAQLAPLEHGFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--ILN 355
ARN+ +TLS E RW YR R + + + +Y ++ L + TK +L+
Sbjct: 407 ARNWPQTLSIAEQSRWDDYRRGRLHGDSGLSELGFDGYYAQLADLRLAHPDDATKQALLD 466
Query: 356 ALLMYGKSITQKI 368
L +G+ + + +
Sbjct: 467 QLAAWGQDLQRTL 479
>gi|352085806|ref|ZP_08953397.1| Exodeoxyribonuclease I [Rhodanobacter sp. 2APBS1]
gi|351681747|gb|EHA64871.1| Exodeoxyribonuclease I [Rhodanobacter sp. 2APBS1]
Length = 481
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 194/379 (51%), Gaps = 19/379 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
M +RN PY REW+N SRWDLI++++ L P GI WP + +G PSFKLEHL+ N
Sbjct: 108 MLYRNFYEPYGREWENGNSRWDLIDLVRMCQALRPEGIVWPTREDGSPSFKLEHLASANQ 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+ ++AHDALSDV A + LARLIR PRL+++ LR+K+ V + P +++
Sbjct: 168 LTQERAHDALSDVHALIELARLIRVRQPRLWDWYYGLRRKQKVFELLDVVNMTPLVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ + ++++ P+ HP +I ++L DP +L D ++I D + + E
Sbjct: 228 RYPASRHCLAVIAPLAAHPSRAGEVIVYDLATDPATWLALDEDEIADRIFTARTDLPEGI 287
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NC-AFKNIKCASSILNNTYIWKKI 235
IP+ + N +P ++ L VL + R + DL C A +++ A L +++
Sbjct: 288 ERIPLRTVRANHAP-ALAPLSVLQGVDLDRLQLDLARCQAHRDVLHAVDGLAEKL--RRV 344
Query: 236 FLDYKINNSDLELNIDEELY---NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
F ++L D EL F+ D LA +R+ P++L F F + + E
Sbjct: 345 FQ----RAAELPPPEDPELALYGGGFLPDADKRLLAQVRATPPQELGARAFPFRDPRYPE 400
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM--FYLEIESLLKKANEHD 350
L+F YRARN+ ETL E RW+ +R +R + L + + ++ + L + D
Sbjct: 401 LLFRYRARNWPETLDADEHARWEDFRRARL-TRHTPLTGLTLDDYFARLGELRRDPAVQD 459
Query: 351 T-KILNALLMYGKSITQKI 368
+L+ L +G+ + +
Sbjct: 460 KLPLLDQLQAWGEQLAASV 478
>gi|386309088|ref|YP_006005144.1| exodeoxyribonuclease I [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418240411|ref|ZP_12866951.1| exonuclease I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|318605038|emb|CBY26536.1| exodeoxyribonuclease I [Yersinia enterocolitica subsp. palearctica
Y11]
gi|351780263|gb|EHB22344.1| exonuclease I [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
Length = 476
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 192/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDITDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEAQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW ++R +K + + L++E+L + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRREALNPEK-----VQDYVLQLEALYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|407715795|ref|YP_006837075.1| exonuclease I [Cycloclasticus sp. P1]
gi|407256131|gb|AFT66572.1| Exonuclease I [Cycloclasticus sp. P1]
Length = 481
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 208/378 (55%), Gaps = 18/378 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY REWK+ SRWDLI++++ + L P GI WP + +G SFKLE L+ N
Sbjct: 109 LLYRNFFDPYAREWKSGNSRWDLIDLVRLTHALRPDGINWPQREDGAASFKLEELTKANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDALSDV AT+ LA+LI+ PR++++ LSLR KK + +++
Sbjct: 169 ILHEAAHDALSDVYATIELAKLIKQQQPRIYSWGLSLRNKKKAAENLDLIHNTAVIHVSS 228
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFK 177
+ + ++++ PI HP+NKN ++ ++L DP + + +I L + N +
Sbjct: 229 KYPAAQDCLAVVVPIAAHPVNKNGVLVFDLSADPTELIDLTAEEIHQRLYTPTAELNEGQ 288
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS---ILNNTYIWKK 234
+ +P+ +H+N+SP+ ++ L L++ + + DL ++C + IL I KK
Sbjct: 289 KRLPLKTVHINKSPM-LAPLSTLTTEVKNKLNIDL------LRCEENRQKIL-GAGIEKK 340
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ + IN + + D LY F S D + +R+ KL+ ++ FE+++LEE+
Sbjct: 341 LAEVFSINTFESATDPDLMLYSGGFFSPIDVQNMTQIRACPIDKLAELSLPFEDERLEEM 400
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNN-LYNINMFYLEIESLLKKAN--EHD 350
+F YRARN+ ETL+ E +W+ YR F + N+ + ++ ++ L+ + + E
Sbjct: 401 LFRYRARNYPETLNEVEKTQWQAYRHDCFIKEHNDGRLTLKAYFERLDELVVEGDWSEEQ 460
Query: 351 TKILNALLMYGKSITQKI 368
+L L+ YG+++ +
Sbjct: 461 QVLLEELIDYGEAVADSL 478
>gi|384427484|ref|YP_005636843.1| exodeoxyribonuclease I [Xanthomonas campestris pv. raphani 756C]
gi|341936586|gb|AEL06725.1| exodeoxyribonuclease I [Xanthomonas campestris pv. raphani 756C]
Length = 481
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 192/375 (51%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANAV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQSQPKLWDYALRLRDKRFAASLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPATRLCAAAVLPLTRHPRIDSRVIVFDLDGDPDALLRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + S + + ++ A K A + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWQHLRSDDFQ---RLGVDRAAVEAKAARLRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D L +RS +P +L + F + +L EL+F
Sbjct: 347 YGAERAGAAAVNDADASLYDGFLAEGDKRLLTQVRSSAPAELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TL E +RW YR R + + FY +I L ++ TK +
Sbjct: 407 YRARNWPQTLPPHEHQRWNDYRRQRLLEDRGLGEVTLEQFYAQIADLRLAHSDDATKQSL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|123442974|ref|YP_001006949.1| exonuclease I [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122089935|emb|CAL12792.1| exodeoxyribonuclease I [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 476
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 191/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHSHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDIADMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTKAQNLPALDLTFQDPRLEVLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW +R +K + + L++E+L + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLAHRREALNPEK-----VQDYVLQLEALYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|375131180|ref|YP_004993280.1| exonuclease I [Vibrio furnissii NCTC 11218]
gi|315180353|gb|ADT87267.1| exonuclease I [Vibrio furnissii NCTC 11218]
Length = 473
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 175/319 (54%), Gaps = 8/319 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 114 YRNFLDPYAWSWQNGNSRWDLLDVMRACHALRPEGVVWPENDEGFTSFKLEHLSKANGIE 173
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P+LF + S+R K+ + I P +++ M
Sbjct: 174 HENAHDAMADVIATIELAKKVKAAQPKLFEYFFSMRHKRKLNELIDIVNMTPLMHVSGML 233
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D+ + L + + D
Sbjct: 234 GRECQYTSWIVPIAWHPTNQNAVIVVDLAKDPQPLLDLDVESLHARLYTRHDDLAPDELP 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ D N+ + I + I +K+ +
Sbjct: 294 VPVKLVHLNKCPI-LAPAKTLTAENAATIGIDRELCLANL---ARIRQSPDIREKLAALF 349
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + ++D +LY+ F S D + I+RS +P+ L ++ F +K++E L+F YR
Sbjct: 350 SIEREFEASNDVDTQLYDGFFSPADKAAMEIIRSTNPELLGELDITFSDKRIEPLLFRYR 409
Query: 299 ARNFIETLSYKELKRWKKY 317
ARNF TL +E +RW +
Sbjct: 410 ARNFPWTLDDEEQRRWANH 428
>gi|387773165|ref|ZP_10128760.1| exonuclease C-terminal domain protein [Haemophilus parahaemolyticus
HK385]
gi|386905205|gb|EIJ69976.1| exonuclease C-terminal domain protein [Haemophilus parahaemolyticus
HK385]
Length = 514
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 198/373 (53%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE +KN SRWDL++V++A Y L P GI W G P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSYKNGNSRWDLLDVVRACYALRPDGINWVTDEEGIPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ + +L++ P+LFN+ R KK V + I P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMTKLLKEKQPKLFNYFFEHRGKKEVESLIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + PI HP NKN +I +L D + L +D ++ L K+ + E
Sbjct: 232 LGNYRGNTAWVVPIEWHPTNKNAVIVCDLSGDIQGLLNDDAEALKTRLYTKRENLAEGEL 291
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC---ASSILNNTYIWKKI 235
+P+ ++H+N+ PI ++ KVL R D +N+K S+L +I
Sbjct: 292 PVPLKLVHINKCPI-LAPAKVLLPENAARLGIDRELCLQNLKVLKQHKSLLRQKV--SEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F D + N++ LY+ F S D +AILR++ P++L++ F + ++E+L+F
Sbjct: 349 FSDERTFAPS--ENVETTLYDGFFSPADKNNMAILRTLKPEELAHHGLKFADPRVEQLLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI-- 353
YRAR++ ETL+ E +W+KY + K F IE+L + ++ K+
Sbjct: 407 HYRARHYPETLTRAEQVKWQKYCNQQIDAK------AEQFAQSIETLSQTYHDDPEKLQW 460
Query: 354 LNALLMYGKSITQ 366
L L+ Y + I++
Sbjct: 461 LEQLMAYAEEISE 473
>gi|254517159|ref|ZP_05129217.1| exodeoxyribonuclease I [gamma proteobacterium NOR5-3]
gi|219674664|gb|EED31032.1| exodeoxyribonuclease I [gamma proteobacterium NOR5-3]
Length = 482
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 199/373 (53%), Gaps = 14/373 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RNL +PY RE+ + SRWDLI++++ Y L P G+ WP +++G PSF+LE L N L
Sbjct: 112 LYRNLRDPYAREYGDGRSRWDLIDIVRTAYALRPEGLIWPERDDGLPSFRLEDLCEANGL 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+ +AHDAL DV+AT+ LARL++ PRLF ++ R K+ V + P+++P +++ M
Sbjct: 172 AQGRAHDALVDVQATIALARLLKERQPRLFQWLYQQRFKQAV-KPLLEPMSQPVLHVSGM 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDY-LCFKKN---SFK 177
F ++ + + L+ P+ H N+N ++ +L D LL D+ + L F N +
Sbjct: 231 FGAQRANLGLILPLAAHHQNRNEVMCADLSIDAD--LLTDLPAAELHRLLFTANADLAEG 288
Query: 178 EDIP-ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN--TYIWKK 234
E P + +H+NR P+++ K+ + + R DL N++ + + K
Sbjct: 289 EQRPGLKSVHINRCPVLLPA-KMADAAVTQRADLDLEACRANLQHLRDYEQHMPGALRDK 347
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ +++ E + D LY FI K+D L + +SP+ L++ F++ +L+E+
Sbjct: 348 LRSVSELSTRAPETDPDRMLYSGGFIPKEDRRTLDRILDLSPEDLADTTVAFDDLRLQEM 407
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN--EHDT 351
+F YRARN+ +TLS +E RW+++R +R + IE L E D
Sbjct: 408 LFRYRARNYPQTLSAEEQLRWEEFRFNRISEGDGRSLTLEGLNELIEERLASPQLCERDR 467
Query: 352 KILNALLMYGKSI 364
++L L +G S+
Sbjct: 468 QVLEELQRWGDSL 480
>gi|188533503|ref|YP_001907300.1| exonuclease I [Erwinia tasmaniensis Et1/99]
gi|188028545|emb|CAO96407.1| Exodeoxyribonuclease I [Erwinia tasmaniensis Et1/99]
Length = 475
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 194/370 (52%), Gaps = 14/370 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 LFYRNFYDPYAWSWQHGNSRWDLLDVMRACYALRPDGIVWPENDDGFPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ +A+ ++ PRL++F+ + R K+ + A I P +P +I+
Sbjct: 174 VAHENAHDAMSDVYATIAMAKRVKEKQPRLYDFLYAHRNKQKIGALIDIPQMKPLVHISG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KE 178
MF + S + P+ HP N+N LIT +L D L D + +R+ L ++
Sbjct: 234 MFGAARGNTSWIAPLAWHPDNRNALITCDLGGDMAPLLELDADALRERLYTRREELNGAS 293
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P+V + L R D N+ + + + + +K+
Sbjct: 294 PVPLKLVHINKCPVV-APANTLRPEDAERIGIDRQRCLDNL---TLLRQHPEVREKVVTL 349
Query: 239 YKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + ++D +LYN F S D + I+R + + L ++ F + ++E+L+F +
Sbjct: 350 FAEAQPFIPSEDVDAQLYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLLFRF 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--ILN 355
RARNF TL E + W ++R N + + E+E L + T+ L
Sbjct: 410 RARNFPGTLDDAEQQSWLQHRREVL-----NPERVQGYVQELEMLFNQYEGDKTRQEQLK 464
Query: 356 ALLMYGKSIT 365
AL Y + +
Sbjct: 465 ALFAYMQELV 474
>gi|420257905|ref|ZP_14760652.1| exonuclease I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404514635|gb|EKA28423.1| exonuclease I [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 476
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 192/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDIADMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L +++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTKAQNLPALDLTFQDPRLEVLLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW +R +K + + L++E+L + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLAHRREALNPEK-----VQDYVLQLEALYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y +++
Sbjct: 465 KALFDYARALV 475
>gi|350531561|ref|ZP_08910502.1| exonuclease I [Vibrio rotiferianus DAT722]
Length = 473
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 200/368 (54%), Gaps = 15/368 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ I+ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKIKAAQPKLFDYFFSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K++ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGDLPPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ + + I +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAESIGIDRQQCLTNLAL---LRQHPEIREKLINLFS 350
Query: 241 INNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
I + N +D +LY+ F S D + I+R P L+ ++ F++K+++ L+F YRA
Sbjct: 351 IEREYEKSNDVDTQLYDGFFSPADRAAMDIIRETDPTNLAALDIEFDDKRIKPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNAL 357
R++ TL +E +RW ++ F ++ I + L +E+L+ +++E IL ++
Sbjct: 411 RHYSSTLDDQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAILKSV 464
Query: 358 LMYGKSIT 365
Y +S+
Sbjct: 465 YRYVESLA 472
>gi|323497417|ref|ZP_08102435.1| exonuclease I [Vibrio sinaloensis DSM 21326]
gi|323317500|gb|EGA70493.1| exonuclease I [Vibrio sinaloensis DSM 21326]
Length = 474
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 199/370 (53%), Gaps = 19/370 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A Y L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACYALRPEGVEWPENDEGFISFKLEHLSKANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ I+ P+LF++ LS+R K+ + + P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKIKAAQPKLFDYFLSMRHKRKLNDLVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S M P+ HP N+N +I +L DP+ L D+ ++ L K + ED
Sbjct: 235 GKECNYTSWMVPLAWHPTNQNAVIMVDLAKDPQPLLDLDVEQLNQRLYTKHSELAEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ D + KN+ + + + + +K+ Y
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAETIGIDRDQCLKNL---ALLRQHPEVREKLIGLY 350
Query: 240 KINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + N +D LY+ F S D + I+R P L+ ++ F + ++ L+F YR
Sbjct: 351 SIEREYAKDNDVDAMLYDGFFSPADKASMDIIRETDPNNLAALDISFNDDRIAPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF +L E +RW + F ++ I + L +E+L+ + +E D K L L
Sbjct: 411 ARNFPWSLDESEQQRWANHCREYFESR------IEEYMLNLENLVHE-HESDEKKLAIL- 462
Query: 359 MYGKSITQKI 368
KS+ Q +
Sbjct: 463 ---KSVYQYV 469
>gi|312884477|ref|ZP_07744181.1| exonuclease I [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367789|gb|EFP95337.1| exonuclease I [Vibrio caribbenthicus ATCC BAA-2122]
Length = 474
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 184/336 (54%), Gaps = 9/336 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP + G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGINWPQNDEGFPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ I P+LF + L +R K+ + I P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKISVAQPKLFQYFLDMRHKRKLNDLIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE---D 179
+ Y S + P+ HP N+N +I +L DP + ++ + L K++ +
Sbjct: 235 GKECQYTSWIVPVAWHPTNQNAVICIDLARDPSAIFDLNAQQLHERLYTKRSELNDKEVS 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
PI ++HLN+SPI ++ K L++ R D +N+ + + N+ I +K+ Y
Sbjct: 295 APIKLVHLNKSPI-LAPAKTLTAEDAQRIGIDREACLENL---AMLRNHPEIREKLIGVY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I ++D LY+ F + D + I+R P+ LS ++ F+++++ +L+F YR
Sbjct: 351 SIEREFKKSSDVDAMLYDGFFNPADKTAMKIIRETDPECLSTLDISFDDERISKLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINM 334
ARNF TLS E ++W + ++ ++ Y +N+
Sbjct: 411 ARNFPWTLSEPEQQKWANH-CREYFEQRIEDYMLNL 445
>gi|433550169|ref|ZP_20506213.1| Exodeoxyribonuclease I [Yersinia enterocolitica IP 10393]
gi|431789304|emb|CCO69253.1| Exodeoxyribonuclease I [Yersinia enterocolitica IP 10393]
Length = 476
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 191/371 (51%), Gaps = 15/371 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWDL++V++A Y L P GI WP G PSFKLEHL+ N
Sbjct: 114 IFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEEGLPSFKLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+ ++ PRLF+++ R K + A I P +++
Sbjct: 174 VEHLHAHDAMSDVYATIAMAKRVKQAQPRLFDYLYQHRSKHKINALIDITDMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP NKN +I +L D L D + +R+ L ++
Sbjct: 234 MFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTHRDKLSAQD 293
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF- 236
+P+ ++H+N+ P++ +L N R D +N++ + N + +K+
Sbjct: 294 AAVPLKLVHINKCPVLAPAKTLLPEN-ADRLGIDRQRCLQNLQL---LRQNPQVREKVVA 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
L + + ++D +LYN F S D + I+ + L ++ F++ +LE L+F
Sbjct: 350 LFAEAEPFAVSDDVDAQLYNGFFSDADRATMKIILQTEAQNLPALDLTFQDPRLEALLFR 409
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--IL 354
+RARN+ TL+ E +RW ++R +K + + L++E+L + + K +L
Sbjct: 410 FRARNYPNTLTDSEQQRWLEHRREALNPEK-----VQDYVLQLEALYNQYEDDKEKLALL 464
Query: 355 NALLMYGKSIT 365
AL Y + +
Sbjct: 465 KALFDYARDLV 475
>gi|238898974|ref|YP_002924656.1| exonuclease I, 3' --> 5'-specific; deoxyribophosphodiesterase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229466734|gb|ACQ68508.1| exonuclease I, 3' --> 5'-specific; deoxyribophosphodiesterase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 490
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 176/324 (54%), Gaps = 14/324 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY WKN SRWDL+++ +A Y L P GI WP G PSFKLEHL+ N+
Sbjct: 111 IFYRNFYDPYAYSWKNGNSRWDLLDLTRACYALRPEGIIWPKNEQGLPSFKLEHLTKANS 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDALSDV AT+ LA+L+++ PRLF++ + R K + I P +++
Sbjct: 171 IKHTQAHDALSDVYATMALAKLLKSAQPRLFHYFYAHRSKHKINTLIHIGDMAPLVHVSG 230
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MFS + + S + PI HP N+N +I +L D L + +R+ L ++ +
Sbjct: 231 MFSPEKGHTSWILPIAWHPDNQNAVIVCDLAGDITPLLSLKADMLRERLYTPRDQLGSEC 290
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ K LS R D KN++ + IF
Sbjct: 291 AQVPLKLVHINKCPI-LAPAKTLSRENAQRLGIDQQHCLKNLELLRRYPDIREKMVAIFD 349
Query: 238 DY----KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
K+N N+D +LY+ F + D +++ ++ P+ L + F++ +LE L
Sbjct: 350 GQKPFPKVN------NVDAQLYDGFFNDFDRAEISTIQKTLPENLPTLKIVFQDPRLETL 403
Query: 294 IFLYRARNFIETLSYKELKRWKKY 317
F +RARN+ ETLS K+ +RWK +
Sbjct: 404 FFRFRARNYPETLSEKDQQRWKAH 427
>gi|119505890|ref|ZP_01627954.1| Exonuclease [marine gamma proteobacterium HTCC2080]
gi|119458271|gb|EAW39382.1| Exonuclease [marine gamma proteobacterium HTCC2080]
Length = 483
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 170/325 (52%), Gaps = 13/325 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+RN PY RE+ N SRWDLI+V +A Y L P GI WP + +G PSF+LE L+ N
Sbjct: 111 ALYRNFFPPYAREFGQNRSRWDLIDVARAIYALRPDGIVWPIREDGLPSFRLEDLTAANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DV AT+ LA+L+ P LF+ + + R K+ + + +P +++
Sbjct: 171 IDHGNAHDALADVLATIALAKLLSKAQPTLFDTLYAQRGKQAIAPLLNCLDPKPVIHVSG 230
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
F ++ ++++ P+ +HP NKN +I +L P FL +R L K F +
Sbjct: 231 QFGAQRDNLAIVLPLAVHPTNKNGVICADLGEAP-AFLDQSSEDVRQLLFTPKADFPAGV 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLN---CAFKNIKCASSILNN--TYIW 232
P+ MI +NR+P+V+ V S R + D + + + A + T
Sbjct: 290 QRPPLKMIQINRAPVVLPTTWV-SGEPAQRLRLDGDQTRASLAAYRVARQVDPKGFTRFI 348
Query: 233 KKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
++I+ D + D +LY F+ + D L +R +P L++ + FE+++L E
Sbjct: 349 EEIYADRAFAPRS---DPDTQLYEGFLGRHDEALLETIRQATPDSLASHTWTFEDRRLPE 405
Query: 293 LIFLYRARNFIETLSYKELKRWKKY 317
+ F YRARNF E+L E RW+++
Sbjct: 406 VFFRYRARNFPESLDPDEKARWREH 430
>gi|381158743|ref|ZP_09867976.1| exonuclease I [Thiorhodovibrio sp. 970]
gi|380880101|gb|EIC22192.1| exonuclease I [Thiorhodovibrio sp. 970]
Length = 492
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 199/379 (52%), Gaps = 25/379 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN ++PY W++ SRWDLI++++ + L P GI WP G SF+LEHL+ N
Sbjct: 114 LFYRNFLDPYGHSWRDGTSRWDLIDLVRLAHALRPEGIEWPRHPGGATSFRLEHLTAANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYV--LAEIGWPIARPFFYI 118
++H+ AHDAL+DVRATL LARL+R+ PRLF++ L LR K+ V L + G P+ ++
Sbjct: 174 IAHQGAHDALADVRATLALARLLRDAQPRLFHYGLELRDKERVRELLKPGQPV----LHV 229
Query: 119 THMFSSKHSYISLMWPICIHPM---NKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS 175
+ + ++ I+ + + + P +++ +I W+L DP + ++ +IR+ + +
Sbjct: 230 SSRYPAERGCIAPV--MVVAPTSAEDRSGVILWDLREDPAELFALEVAEIRERVFTRAED 287
Query: 176 FKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC----ASSILNN 228
I P+ + LN SP+V + L L ++ R+ D + + A ++
Sbjct: 288 LPPGIRRLPLKKLRLNASPMV-APLSTLRADAAERWLIDPTQVKQRWQAFHANAEAV--- 343
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENK 288
+ +++ + + D + D LY F D + +R+MSP +L+ F++
Sbjct: 344 ARVAERVRAAFARHGLDAAQDPDHALYAGFFPPADQRLMGRVRAMSPAELAGARLKFQDP 403
Query: 289 KLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NINMFYLEIESLLK--K 345
+L L+F YRARN+ ++LS E W +RI + ++ + ++ + I L +
Sbjct: 404 RLPVLLFRYRARNWPDSLSPTERATWDAWRIRQLADESSGCGPSLRQYRQRIRELRDEHR 463
Query: 346 ANEHDTKILNALLMYGKSI 364
N ++LNAL + + I
Sbjct: 464 GNAATEQLLNALENWPREI 482
>gi|260768651|ref|ZP_05877585.1| exodeoxyribonuclease I [Vibrio furnissii CIP 102972]
gi|260616681|gb|EEX41866.1| exodeoxyribonuclease I [Vibrio furnissii CIP 102972]
Length = 473
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 175/319 (54%), Gaps = 8/319 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 114 YRNFLDPYAWSWQNGNSRWDLLDVMRACHALRPEGVVWPENDEGFTSFKLEHLSKANGIE 173
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P+LF + S+R K+ + I P +++ M
Sbjct: 174 HENAHDAMADVIATIELAKKVKAAQPKLFEYFFSMRHKRKLNELIDIVNMTPLMHVSGML 233
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D+ + L + + D
Sbjct: 234 GRECQYTSWIVPIAWHPTNQNAVIVVDLAKDPQPLLDLDVESLHARLYTRHDDLAPDELP 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ D N+ + I + I +K+ +
Sbjct: 294 VPVKLVHLNKCPI-LAPAKTLTAENAATIGIDRELCLANL---ARIRQSPDIREKLAALF 349
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + ++D +LY+ F S D + I+RS +P+ L ++ F +K+++ L+F YR
Sbjct: 350 SIEREFEASNDVDTQLYDGFFSPADKAAMEIIRSTNPELLGELDITFSDKRIDPLLFRYR 409
Query: 299 ARNFIETLSYKELKRWKKY 317
ARNF TL +E +RW +
Sbjct: 410 ARNFPWTLDDEEQRRWANH 428
>gi|431931463|ref|YP_007244509.1| exonuclease I [Thioflavicoccus mobilis 8321]
gi|431829766|gb|AGA90879.1| exonuclease I [Thioflavicoccus mobilis 8321]
Length = 478
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 177/332 (53%), Gaps = 10/332 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RNL +PY REW+N SRWDLI+V++A + L P GI WP +++G SF+LE L+ N
Sbjct: 109 LLYRNLFDPYAREWRNGNSRWDLIDVLRAAHALRPAGIEWPKRDDGTASFRLEDLTAANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+ L R ++ P+LF++ L LR K+ L + RP +++
Sbjct: 169 IEHGAAHDALADVRATIALVRRLKQAQPKLFDYALRLRDKRVALRMLA--EGRPLLHVSA 226
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+ ++ I+ + PI HP N N +I ++L DP F + +R+ L D
Sbjct: 227 RYPAERGCIAPVLPIAHHPTNANGVIVFDLREDPAAFADLSVEALRERLFTPAAERAGDV 286
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
IP+ + +N +P ++ L L+ R+ DL+ ++ ++ + +++
Sbjct: 287 APIPVKTVRVNHAPF-LAPLATLTPEAAERWAADLDRVRRHAGATDAL---KALGERLVQ 342
Query: 238 DYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + D LY FI D L LR ++P+ L+ FE+ +L E+++
Sbjct: 343 VYGRPMRGPPSDPDLMLYSGGFIGDADRRVLDRLRRLAPEDLAVERPTFEDPRLPEMLWR 402
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNN 328
YRARN+ ETL+ E + W YR++R + +
Sbjct: 403 YRARNWPETLTDAEREDWDAYRLARLADPEAG 434
>gi|380511878|ref|ZP_09855285.1| exonuclease I [Xanthomonas sacchari NCPPB 4393]
Length = 479
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 190/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + L P GI WP + +G SFKLE L+ N +
Sbjct: 110 LFRNFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIVWPQREDGATSFKLEQLALANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR R + PRL+ + L LR K++ + + +P +++
Sbjct: 170 RDGDAHEALSDVYATIGMARHFRRSQPRLWEYALKLRDKRFCGSLLDAVAMQPVLHVSMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + ++ ++L D + L +I D L + E
Sbjct: 230 YPAARLCAAPVLPLARHPRIDSRVLVFDLEGDIEPLLRYSPEQIADRLYTPQADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + ++ + L+ A K + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWAHLREADFA---RLRLDPAHLLTKAERLREAGPALAEKVRRV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + + + D LY+ F++ D +A +R+ P +L+ + F + +L EL+F YR
Sbjct: 347 FASERAAVPADADASLYDGFLADGDKRTMAQVRATPPAQLAALEGQFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--ILN 355
ARN+ ++LS E RW YR R + N + FY E+ L + TK +L+
Sbjct: 407 ARNWPQSLSIAEQSRWDDYRRQRLQQDSGLSELNFDTFYAELAGLRLAHPQDATKQALLD 466
Query: 356 ALLMYGKSITQKI 368
L +G + + +
Sbjct: 467 QLAAWGHDLQRSL 479
>gi|333984013|ref|YP_004513223.1| exodeoxyribonuclease I [Methylomonas methanica MC09]
gi|333808054|gb|AEG00724.1| Exodeoxyribonuclease I [Methylomonas methanica MC09]
Length = 480
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 199/365 (54%), Gaps = 15/365 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RN +PY REW+N SRWDLI+V +A L P GI WP ++G SF+LE L+ N
Sbjct: 110 LLYRNFYDPYAREWQNGNSRWDLIDVARATRALRPDGIHWPVNDDGTASFRLEVLTQANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH+ AHDALSDV AT+ LARLI+ P+L++++ + R K VL + P +++
Sbjct: 170 ISHQAAHDALSDVYATIALARLIKQKQPKLYDYLYANRHKPAVLNLLQLGSFTPLVHVSG 229
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
F ++ + ++++ P+ HP N N +I ++L DP L +I+ + + E
Sbjct: 230 RFPARTNCLAIVVPLYAHPRNSNEVIVYDLSVDPAPLLELSAEEIQQRVFVANDDLPEGV 289
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL-NCA--FKNIKCASSILNNTYIWKK 234
IP+ +H+N+SP V++ LKV+ N R + DL C + IK A+ + +K
Sbjct: 290 ARIPLKTVHINKSP-VLAPLKVIRQNDAQRLELDLAQCRLHLERIKSAAG----KSLEQK 344
Query: 235 IFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+ + +D + D +Y F S KD + +R P++L+ + F++ +L E+
Sbjct: 345 LATVFTREYADTPDDPDVMIYSGGFFSHKDKNAMQKIRQTPPERLAILGADFDDARLPEM 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK--ANEHDT 351
+F YR RN+ TL+ E +RW+++ R + N+ N+ F +++L K AN+
Sbjct: 405 LFRYRGRNYPHTLNQDENQRWQQFCRDRLIDPANSC-NLTWFNEYLQTLQSKPDANQQLL 463
Query: 352 KILNA 356
K L A
Sbjct: 464 KELQA 468
>gi|417951637|ref|ZP_12594733.1| exonuclease I [Vibrio splendidus ATCC 33789]
gi|342804421|gb|EGU39739.1| exonuclease I [Vibrio splendidus ATCC 33789]
Length = 474
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 192/362 (53%), Gaps = 12/362 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRAVHALRPDGIVWPENEEGFPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P++F+++ ++R K+ + + P +++ M
Sbjct: 175 HENAHDAMADVIATIELAKKLKAAQPKMFDYLYNMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+Y S + P+ HP N+N +I +L DP L D +++R+ L K + ED
Sbjct: 235 GRDCNYTSWIVPMAWHPTNQNAVIVVDLAKDPSPLLELDTDELRERLYTKHSDLNEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++ LN+ PI ++ K L++ D KN+ + + I +K+ Y
Sbjct: 295 VPIKLVQLNKCPI-LAPAKTLTAENAETIGIDRQQCLKNLAI---LREHPEIREKLIGLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ ++D +LY+ F S D + I+R P L+ ++ F +++++ L+F YR
Sbjct: 351 SQEREYEKSDDVDTQLYDGFFSPADKTAMNIIRETDPNNLAALDITFSDERIKPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALL 358
ARNF TL E +W + FY + Y +N+ L E +++E IL A+
Sbjct: 411 ARNFPWTLDESEQLKWANH-CREFYESRLEEYMLNLENLAHE---HESDEKKMAILKAVY 466
Query: 359 MY 360
Y
Sbjct: 467 QY 468
>gi|440733171|ref|ZP_20912941.1| exonuclease I [Xanthomonas translucens DAR61454]
gi|440364155|gb|ELQ01294.1| exonuclease I [Xanthomonas translucens DAR61454]
Length = 479
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 191/373 (51%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL+++++ + L P GI WP + +G SFKLE L+ N +
Sbjct: 110 LFRNFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+A+L R + PRL+++ L LR K++ + +P +++
Sbjct: 170 RDGDAHEALSDVHATIGMAQLFREHQPRLWDYALKLRDKRFCGGLLDVVAMQPVLHVSMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + ++ ++L D + L +I D L + E
Sbjct: 230 YPAARLCAAPVLPLARHPRIDSRVLVFDLEGDIEPLLRYTPEQIADRLYTPQADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + + + ++ A K A + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWSHLREPDFA---RLQIDPAQILAKAARLREAGPALAEKVRRV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D LY+ F++ D +A +R+ P +L+ + F + +L EL+F YR
Sbjct: 347 FGSERASATADVDASLYDGFLADTDKRAMAQVRATPPAQLAPLEHGFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--ILN 355
ARN+ +TLS E RW YR R + + + +Y ++ L + TK +L+
Sbjct: 407 ARNWPQTLSIAEQSRWDDYRRQRLHGDSGLSELGFDGYYAQLADLRLAHPDDATKQALLD 466
Query: 356 ALLMYGKSITQKI 368
L +G+ + + +
Sbjct: 467 QLAAWGQDLQRTL 479
>gi|343498731|ref|ZP_08736750.1| exonuclease I [Vibrio tubiashii ATCC 19109]
gi|418479891|ref|ZP_13048961.1| exonuclease I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342823956|gb|EGU58538.1| exonuclease I [Vibrio tubiashii ATCC 19109]
gi|384572539|gb|EIF03055.1| exonuclease I [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 474
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 197/365 (53%), Gaps = 18/365 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A Y L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACYALRPEGVNWPENDEGFISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ ++ P+LF++ LS+R K+ + I P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKVKAAQPKLFDYFLSMRHKRKLNELIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP N+N +I +L DP+ L D ++ + L K++ D
Sbjct: 235 GKECNYTSWVVPVAWHPTNQNAVICVDLAKDPQALLDLDTKQLNERLYTKRSDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +IHLN+ PI ++ K L++ + D +N+ + + + + +K+ Y
Sbjct: 295 VPVKLIHLNKCPI-LAPAKTLTAENAEKIGIDREKCLENL---ALLRKHPEVREKLIGVY 350
Query: 240 KINNSDLELN-IDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + N +D LY+ F S D + I+R P LS ++ F + ++ L+F YR
Sbjct: 351 GIEREYEKSNDVDSMLYDGFFSPADKAAMNIIRETDPNNLSALDISFSDDRIAPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---ILN 355
ARNF TL E +RW + F ++ I + L +E+L+ + +E D K IL
Sbjct: 411 ARNFPWTLDESEQQRWATHCRDYFESR------IEDYMLNLENLVHE-HESDQKKIAILK 463
Query: 356 ALLMY 360
++ Y
Sbjct: 464 SIYQY 468
>gi|315122155|ref|YP_004062644.1| exonuclease I [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495557|gb|ADR52156.1| exonuclease I [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 472
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 200/374 (53%), Gaps = 17/374 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY +KN SRWDLINV++A Y SP GI WP++++G PSFKL+ L+ N
Sbjct: 108 IFYRNFYDPYGWSYKNGNSRWDLINVMRAIYAFSPDGIQWPHRDDGFPSFKLQDLALANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ + AHDA DV ATL LARL+R P+LFN++ + R K ++ + I P +++
Sbjct: 168 IEYVNAHDAEQDVDATLALARLVRREKPKLFNYLYNSRNKMHLKSLIDIRNLTPLVHVSS 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKI----RDYLCFKKNSF 176
F + + +L+ PI HP N N +I NL D + +L D++ I R + + +
Sbjct: 228 KFGAAQANTALIAPIAWHPRNANEIIACNLSGDMQ--VLQDLDSIELGKRLFTRHDQLNG 285
Query: 177 KEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+P+ +H+NR P++ + S R D N+K ++ + +K+
Sbjct: 286 LSPVPLKSVHINRCPVLFP-IGSFHSKKFERLGIDDKRCVDNLKLLRQQVD---LQEKVI 341
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y L ++D LY+ F+S +D + P+KLS +NF F +++L EL+F
Sbjct: 342 AIYDKPFVSLSEDVDSRLYDGFLSDEDCKMRDCIPLTEPEKLSTLNFQFTDQRLPELLFR 401
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK--KANEHDTKIL 354
YRARNF TL KE + W ++R + F + I + ++ +LL K+NE + +++
Sbjct: 402 YRARNFPHTLDSKEKQAWLEHRKAIFTRSR-----IEEYENKLHTLLNAYKSNEREERLV 456
Query: 355 NALLMYGKSITQKI 368
L Y + I K+
Sbjct: 457 QLLFDYLQLIVPKV 470
>gi|114331862|ref|YP_748084.1| exonuclease I [Nitrosomonas eutropha C91]
gi|114308876|gb|ABI60119.1| Exodeoxyribonuclease I subunit C [Nitrosomonas eutropha C91]
Length = 486
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 195/374 (52%), Gaps = 15/374 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY REW++ SRWD+I++ + + L P GI WP GKPSF+LE ++ N L
Sbjct: 113 LYRNFYDPYAREWQSGNSRWDVIDLARMTFALRPEGINWPVNGEGKPSFRLEDITAANGL 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDALSDVRAT+ LARL+R+ PRL++++ LR K+ + P + + M
Sbjct: 173 MHDSAHDALSDVRATIALARLLRDRQPRLYDWLFRLRDKREASHLLDLTAHTPVLHTSRM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ S+ +L+ P+ N N ++ ++L HDP +F+ +++ + + L K E
Sbjct: 233 YPSEQGCTTLVMPLLPETGNTNSILVYDLRHDPAEFMQLNVDALVERLFTPKLELAEGQQ 292
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS---ILNNTYIWKKI 235
+P+ I LN+ P ++ KVL+ + R + +C +L + ++I
Sbjct: 293 RLPVKTIRLNKCP-ALAPQKVLNDEIAKR------IGLNDEQCQQHWQLLLQHPDFMQRI 345
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
Y E + D LY+ F + D ++R P++L +++ F++ + EL+F
Sbjct: 346 RQAYSNGKIFPENDADLALYDGFANDHDRNLFPLVRDSEPERLIDLSEEFQDGRYAELLF 405
Query: 296 LYRARNFIETLSYKELKRWKKY-RISRFYNKKNNLYNINMFYLEIESLLKKANEH-DTKI 353
YRARNF +TLS +E RW+ + R + N +N + ++ L + +I
Sbjct: 406 RYRARNFPDTLSAQEKHRWQVHCRRQLGEDAINGSLTLNKYRQKLIQLRTDCPQQAQQEI 465
Query: 354 LNALLMYGKSITQK 367
LN L +G+++ Q+
Sbjct: 466 LNELEAWGRALAQE 479
>gi|325921108|ref|ZP_08182979.1| Exodeoxyribonuclease I subunit C [Xanthomonas gardneri ATCC 19865]
gi|325548380|gb|EGD19363.1| Exodeoxyribonuclease I subunit C [Xanthomonas gardneri ATCC 19865]
Length = 481
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 194/375 (51%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANAV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+ + L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARRFQQHQPKLWEYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L ++I D L + E
Sbjct: 230 YPAARMCAAAVLPLTRHPRIDSRVIVFDLDGDPEVLLRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + ++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLREADFQ-RLGIDHDAVLA--KAARLRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGNERAAAPAVNDADASLYDGFLAEGDKRLLAQVRASAPAELGALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + ++ F+ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLDQFHAQIADLRLAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|260914022|ref|ZP_05920495.1| exodeoxyribonuclease I [Pasteurella dagmatis ATCC 43325]
gi|260631655|gb|EEX49833.1| exodeoxyribonuclease I [Pasteurella dagmatis ATCC 43325]
Length = 476
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 187/367 (50%), Gaps = 19/367 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W + NG PSF+LE L+ VN +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAHDENGMPSFRLEKLTQVNGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF F R KK + I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQFFFENRGKKEIENLIDVANMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP+N+N +I +L + L ++R L K E
Sbjct: 234 LGNYRGNTAWVVPLAWHPINQNAVIVCDLSANLDDLLTKSAAELRQNLYTPKAELLEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI ++ KVL R D +N++ L N+ + I
Sbjct: 294 LPVPLKLVHINKCPI-LAPAKVLLPENALRLGIDREFCLQNLQ----RLKNSANIRDIVT 348
Query: 238 DYKINNSDL---ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
D N + LN++ ELY+ F D +AILR++ KL+ F++K++ EL+
Sbjct: 349 DIFTNEDKVFEPSLNVETELYSGFFDFSDKNNMAILRNLPVDKLAEHGLAFKDKRIPELL 408
Query: 295 FLYRARNFIETLSYKELKRWKKYR-------ISRFYNKKNNLYNINMFYLEIESLLKKAN 347
F YRAR+ TL+ E +W+KYR F L N E LLKK
Sbjct: 409 FHYRARHHFSTLTRAEQIKWQKYRHKKLEQSAVEFEQNLQRLIEENHNNPEKLELLKKVY 468
Query: 348 EHDTKIL 354
E+ K+L
Sbjct: 469 EYGAKLL 475
>gi|384418798|ref|YP_005628158.1| exodeoxyribonuclease I [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461711|gb|AEQ95990.1| exodeoxyribonuclease I [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 481
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 192/368 (52%), Gaps = 11/368 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIVMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPDVLLRLSPDEIADRLYSRAADLPEGER 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDRDAVLA--KAARLHEMGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAPAAATNDADASLYDGFLAEGDKRLLAQVRTSAPAELGALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + + +I L + + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNAYRRQRLLEDRGLGEVTLEQYNAQIVDLRRAHPDDATKQAL 466
Query: 354 LNALLMYG 361
L+ L +G
Sbjct: 467 LDQLAAWG 474
>gi|88800886|ref|ZP_01116440.1| putative exodeoxyribonuclease i protein [Reinekea blandensis
MED297]
gi|88776399|gb|EAR07620.1| putative exodeoxyribonuclease i protein [Reinekea sp. MED297]
Length = 517
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 191/371 (51%), Gaps = 9/371 (2%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNLINPYEREWKN SRWDL++V++ + L P GI WP +++G PSF+LEHL+ N
Sbjct: 115 LFYRNLINPYEREWKNGNSRWDLLDVVRMTHALRPDGIEWPRRDDGSPSFRLEHLTAANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
LSH AHDA+SDV+AT+ LA+LIR P+LF++ SLR K I +P + +
Sbjct: 175 LSHANAHDAVSDVKATIALAQLIRKQQPKLFDYAFSLRSKHRAREAIDLVGGKPHLHFSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+ + + P+ HP N +I ++ DP L +D + +R +L K E
Sbjct: 235 KIPASEFCMGIEVPLMAHPDRNNEVIVIDIREDPAWILDHDADTLRTWLYAKTEELPEGA 294
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
P+ IHLNRSP+ I+ + +L R DL+ + + + + +F
Sbjct: 295 RRPPLKTIHLNRSPM-IAPMSLLDDETTTRLGVDLDAIQHHYRWVADHPELNRLAMDVFT 353
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRS--MSPKKLSNVNFCFENKKLEELIF 295
+ + + + ++ LY+ FIS D L +R+ + P++ + + ++ +L ++
Sbjct: 354 ETQERAA--ITDPEQALYSGFISDHDQALLNRMRTGKLPPEQWLDNSHLLQDDRLPTILL 411
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
AR F + L+ ++L W+ R + +++ + + + ++L A D L
Sbjct: 412 NLLARAFPDCLTEQQLSEWQDQRRTYLIEQQDERH-LTLSQALTDTLALLAETPDDPALT 470
Query: 356 ALLMYGKSITQ 366
MY +S Q
Sbjct: 471 DTRMYLESRLQ 481
>gi|153833726|ref|ZP_01986393.1| exodeoxyribonuclease I [Vibrio harveyi HY01]
gi|148870005|gb|EDL68965.1| exodeoxyribonuclease I [Vibrio harveyi HY01]
Length = 473
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 200/374 (53%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K++ E +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGELLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N KC S++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAEV-------IGIDRQKCLSNLALLRQHPEIREKLIS 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIEREFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRAR++ TL +E +RW ++ F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|262402419|ref|ZP_06078980.1| exodeoxyribonuclease I [Vibrio sp. RC586]
gi|262351201|gb|EEZ00334.1| exodeoxyribonuclease I [Vibrio sp. RC586]
Length = 474
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 188/353 (53%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A Y L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACYALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D + ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIMVDLGKDPQPLLDLDADALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L ++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLEIKVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +EH T
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLV---HEHQT 454
>gi|262275634|ref|ZP_06053443.1| exodeoxyribonuclease I [Grimontia hollisae CIP 101886]
gi|262219442|gb|EEY70758.1| exodeoxyribonuclease I [Grimontia hollisae CIP 101886]
Length = 474
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 192/371 (51%), Gaps = 18/371 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWDL++V++A Y L P GI WP + G SFKLEHLS N +
Sbjct: 114 LYRNFFDPYGWIWQNGNSRWDLLDVMRAAYALRPDGIEWPVNDEGNISFKLEHLSVANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+ ++ PRLF+++ + R K + A I +P +++ M
Sbjct: 174 EHSNAHDAMADVHATIEMAKKLKAAQPRLFDYLYTHRNKNKLTALIDVVSMKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
F + S + P+ HP NKN +I +L DP D + +R+ L K D
Sbjct: 234 FGVERGNTSWIVPVAWHPDNKNAVIAIDLGRDPSPLFDLDADALRERLYTKHADLAPDEL 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +IH+N+ P V+++ K L R D +N+K + + I +K+
Sbjct: 294 PVPVKLIHINKCP-VLADAKTLRPEDAARLGIDRQQCLENLK---KLQAHPEIREKLVTL 349
Query: 239 YKINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
Y N+D LY+ F S D + I+R P+ L+ ++ + +++ L+F Y
Sbjct: 350 YAEKPEYASSGNVDAALYDGFFSPADRSTMDIIRQTKPENLAALDIQVSDPRIKPLLFRY 409
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---IL 354
RARNF TL+ E K+W +R ++ + Y N+ L +AN++D K IL
Sbjct: 410 RARNFPWTLTDSEQKQWHMHR-RDYFEAELPAYMANL------EALAEANQNDEKKFAIL 462
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 463 KSVYHYIESLV 473
>gi|386390488|ref|ZP_10075277.1| exonuclease C-terminal domain protein [Haemophilus
paraphrohaemolyticus HK411]
gi|385693213|gb|EIG23868.1| exonuclease C-terminal domain protein [Haemophilus
paraphrohaemolyticus HK411]
Length = 514
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 19/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PYE +KN SRWDL++V++A Y L P GI W G P+FKLE+L+ N +
Sbjct: 112 FFRNFFDPYEYSYKNGNSRWDLLDVVRACYALRPDGINWVTDEEGIPNFKLENLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ + +L++ P+LF++ R KK V + I P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMTKLLKEKQPKLFDYFFEHRGKKEVESLIDTGEMTPLVHVSGM 231
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + PI HP NKN +I +L D + L +D ++ L K+ + E
Sbjct: 232 LGNYRGNTAWVVPIEWHPTNKNAVIVCDLSGDIQGLLNDDAEALKTRLYTKRENLAEREL 291
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC---ASSILNNTYIWKKI 235
+P+ ++H+N+ PI ++ KVL R D +N+K S+L +I
Sbjct: 292 PVPLKLVHINKCPI-LAPAKVLLPENAERLGIDRELCLQNLKALKQHKSLLRQKV--SEI 348
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
F D + N++ LY+ F S D +AILR++ P++L++ F + ++E+L+F
Sbjct: 349 FSDERTFAPS--ENVEITLYDGFFSPADKNNMAILRTLKPEELAHHGLKFADPRVEQLLF 406
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK--I 353
YRAR++ ETL+ E +W+KY N++ ++ + F IE+L + ++ K +
Sbjct: 407 HYRARHYPETLTRAEQVKWQKY-----CNQQIDV-KVEQFAQSIETLSQTYHDDPEKLQL 460
Query: 354 LNALLMYGKSITQ 366
L L+ Y + I++
Sbjct: 461 LEQLMAYAEEISE 473
>gi|387126759|ref|YP_006295364.1| Exodeoxyribonuclease I [Methylophaga sp. JAM1]
gi|386273821|gb|AFI83719.1| Exodeoxyribonuclease I [Methylophaga sp. JAM1]
Length = 480
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+N SRWD+I++++ L P GI WP + +G PSF+LE L+ N +
Sbjct: 109 LFRNFYDAYAREWQNGNSRWDIIDMVRLTRALRPEGIEWPNREDGLPSFRLEALTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDAL DV AT+ LA+LI++ P+L+++I LR+K+ + + A P + + M
Sbjct: 169 EHQGAHDALVDVHATIALAKLIKDRQPKLYDYIYQLRRKQQLAPLLNLHHADPVLHTSRM 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ S++ +L+ PI P N N ++ ++L HDP L D + IR +L E
Sbjct: 229 YPSEYCNTALVMPIAKEPNNNNGVVVYDLRHDPSALLEQDADTIRQWLFTPTRDLPEGAS 288
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ +H+N+ P+++ L R + D + K+++ + +K+
Sbjct: 289 RPALKTVHINKCPVIVP-AATLDDAAAERLQIDRELSHKHLQLLREA--GESLQQKLQTV 345
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + D ++D LY F D K+ ++R +P +L ++ F + +L E++F Y
Sbjct: 346 FSQKSFDEIDDVDASLYGGGFFDDGDKNKMTLIREAAPDQLGTLSIPFNDPRLPEMLFRY 405
Query: 298 RARNFIETLSYKELKRWKKY 317
RARN+ E+L+ E ++W+++
Sbjct: 406 RARNWPESLNESEAEQWQQF 425
>gi|156974404|ref|YP_001445311.1| exonuclease I [Vibrio harveyi ATCC BAA-1116]
gi|388601182|ref|ZP_10159578.1| exonuclease I [Vibrio campbellii DS40M4]
gi|444424291|ref|ZP_21219749.1| exonuclease I [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|156525998|gb|ABU71084.1| hypothetical protein VIBHAR_02119 [Vibrio harveyi ATCC BAA-1116]
gi|444242286|gb|ELU53800.1| exonuclease I [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 473
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 200/374 (53%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVVATIEMAKKVKAAQPKLFDYFFSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K++ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N KC S++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAEV-------IGIDRQKCLSNLALLRQHPEIREKLIS 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIEREFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRAR++ TL +E +RW ++ F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|346724480|ref|YP_004851149.1| exonuclease I [Xanthomonas axonopodis pv. citrumelo F1]
gi|346649227|gb|AEO41851.1| exonuclease I [Xanthomonas axonopodis pv. citrumelo F1]
Length = 481
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 197/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFQ-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + + ++ +I L + + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLFEDRGLGEVTLEQYHAQIADLRRTHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|294626343|ref|ZP_06704945.1| exodeoxyribonuclease I [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665158|ref|ZP_06730459.1| exodeoxyribonuclease I [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599344|gb|EFF43479.1| exodeoxyribonuclease I [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605071|gb|EFF48421.1| exodeoxyribonuclease I [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 481
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + PRL+++ L LR K++ + + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPRLWDYALRLRDKRFAASLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLDGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L E TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRGAHPEDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|58426647|gb|AAW75684.1| exodeoxyribonuclease I [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 502
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 191/368 (51%), Gaps = 11/368 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 131 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANDV 190
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 191 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 250
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 251 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPDVLLRLSPDEIADRLYIRAADLPEGER 310
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 311 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDQDAVLA--KAARMRELGPELAEKVRQV 367
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 368 YGSERAPAAATNDADASLYDGFLAEGDKRLLAQVRTSAPAELCALESRFRDPRLIELLFR 427
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS+ E +RW YR R + + + +I L + + TK +
Sbjct: 428 YRARNWPQTLSFDEQERWNAYRRQRLLEDRGLGEVTLEQYNAQIVDLRRAHPDDATKQAL 487
Query: 354 LNALLMYG 361
L+ L +G
Sbjct: 488 LDQLAAWG 495
>gi|84623964|ref|YP_451336.1| exonuclease I [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|161898991|ref|YP_201069.2| exonuclease I [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84367904|dbj|BAE69062.1| exodeoxyribonuclease I [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 481
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 191/368 (51%), Gaps = 11/368 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPDVLLRLSPDEIADRLYIRAADLPEGER 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDQDAVLA--KAARMRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAPAAATNDADASLYDGFLAEGDKRLLAQVRTSAPAELCALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS+ E +RW YR R + + + +I L + + TK +
Sbjct: 407 YRARNWPQTLSFDEQERWNAYRRQRLLEDRGLGEVTLEQYNAQIVDLRRAHPDDATKQAL 466
Query: 354 LNALLMYG 361
L+ L +G
Sbjct: 467 LDQLAAWG 474
>gi|433657510|ref|YP_007274889.1| Exodeoxyribonuclease I [Vibrio parahaemolyticus BB22OP]
gi|432508198|gb|AGB09715.1| Exodeoxyribonuclease I [Vibrio parahaemolyticus BB22OP]
Length = 473
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 197/374 (52%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVKNGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ + +
Sbjct: 235 GRERQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSTEELHERLYTKREDLGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N N KC ++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAE-------NIGIDRQKCLDNLALLRQHPEIREKLIG 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIERQFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRARNF TL +E +RW + F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARNFPSTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|188576332|ref|YP_001913261.1| exonuclease I [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520784|gb|ACD58729.1| exodeoxyribonuclease I [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 481
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 191/368 (51%), Gaps = 11/368 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP L ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPDVLLRLSPDEIADRLYIRAADLPEGER 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDQDAVLA--KAARMRELGPELAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAPAAATNDADASLYDGFLAEGDKRLLAQVRTSAPAELCALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS+ E +RW YR R + + + +I L + + TK +
Sbjct: 407 YRARNWPQTLSFDEQERWNAYRRQRLLEDRGLGEVTLEQYNAQIVDLRRAHPDDATKQAL 466
Query: 354 LNALLMYG 361
L+ L +G
Sbjct: 467 LDQLAAWG 474
>gi|237807889|ref|YP_002892329.1| Exodeoxyribonuclease I [Tolumonas auensis DSM 9187]
gi|237500150|gb|ACQ92743.1| Exodeoxyribonuclease I [Tolumonas auensis DSM 9187]
Length = 506
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 197/368 (53%), Gaps = 23/368 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN ++PY W+ SRWDL++V +AFY L P GI W Y GKPSF+LE LS N +
Sbjct: 149 FYRNFLDPYAYSWQQGNSRWDLLDVARAFYALRPEGINWVYDAEGKPSFRLEKLSVANGI 208
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA+SDV AT+GLA+ ++ PRLF ++ + R K + I +P +++ M
Sbjct: 209 QHENAHDAMSDVYATIGLAKSLKQAQPRLFEYLSTHRGKNKLKNLIDIINIKPLVHVSGM 268
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +S + P+ HP N N +I +L D L +I ++R+ L +K+ +
Sbjct: 269 FSAVQGCVSWIAPMAWHPTNNNAVIVIDLHKDLSPLLELNITELRERLYTRKDDITDGSP 328
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---IF 236
+P+ +IH+N+ P V++ LS + + +N+ + + N I +K +F
Sbjct: 329 VPVKLIHINKCP-VLAPASSLSEERAQELGINRDLCMQNL---AVLRQNPQIREKLAGLF 384
Query: 237 LDYKINNSDLELNIDEE--LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
D I + N D E LY F S+ D + +++ S ++L+ + F + +L L+
Sbjct: 385 SDEYIPPA----NQDPEHMLYQGFFSEADRAAIDLIQQASAEQLAAGQYQFHDPRLPTLL 440
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTK 352
F YRARN+ TLS +E ++W+++ + ++ + L +E+LL K +
Sbjct: 441 FRYRARNYPHTLSPREQQQWQQFCVDALNSRAEP------YLLRLEALLEGKVPGTREWN 494
Query: 353 ILNALLMY 360
I+ AL +Y
Sbjct: 495 IIKALALY 502
>gi|78047196|ref|YP_363371.1| exonuclease I [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78035626|emb|CAJ23314.1| exodeoxyribonuclease I [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 481
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFQ-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAVAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + ++ TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRRTHSDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|229515610|ref|ZP_04405069.1| exodeoxyribonuclease I [Vibrio cholerae TMA 21]
gi|229347379|gb|EEO12339.1| exodeoxyribonuclease I [Vibrio cholerae TMA 21]
Length = 478
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 119 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 178
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 179 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 238
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 239 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 298
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L+S + D ++ I + I +K+ +
Sbjct: 299 VPVKLVHLNKCPI-LAPAKTLTSENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 354
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 355 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 414
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 415 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 468
Query: 357 LLMY 360
+ Y
Sbjct: 469 VYHY 472
>gi|374314215|ref|YP_005060644.1| exodeoxyribonuclease I [Serratia symbiotica str. 'Cinara cedri']
gi|363988441|gb|AEW44632.1| exodeoxyribonuclease I [Serratia symbiotica str. 'Cinara cedri']
Length = 472
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 199/372 (53%), Gaps = 22/372 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL+NV++A Y L P G+ WP +G PSF+L L+ +N
Sbjct: 108 IFYRNFYDPYAYSWQNGNSRWDLLNVVRACYALRPDGVLWPKNKDGLPSFRLADLTRING 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H +AHDA SDV AT+ +A+ ++ PRLFNF+L R K + I P +++
Sbjct: 168 IKHTQAHDAWSDVCATIAVAKQVKRAQPRLFNFLLQYRSKYKLNTLIDIDTMTPLVHVSA 227
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF---K 177
+F + +S + P+ HP+N N +I +L D L + N++R+ L + + K
Sbjct: 228 IFGAVRGNVSWVAPLAWHPVNNNAVIMCDLAGDLTCLLTLNANQLRELLYTRYEALAVNK 287
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFD-LNCA--FKNIKCASSILNNTYIWKK 234
+P+ ++++N+ P V++ K L R D LNC + ++ + IL
Sbjct: 288 PSVPLMLVYINKCP-VLAPSKTLLPEHAERLGIDRLNCQQNLQILRKSPQILRKVI---A 343
Query: 235 IFLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
+F ++K SD NID LY+ F S D ++I++ PK LS +N + +++EL
Sbjct: 344 VFAEHKPYKGSD---NIDARLYDGFFSDTDRAVMSIVKQTCPKNLSTLNIVSSDDRIKEL 400
Query: 294 IFLYRARNFIETLSYKELKRWKKY--------RISRFYNKKNNLYNINMFYLEIESLLKK 345
+F +RARN+ TL+ E +RW +Y RI ++ + N LYN++ E LL
Sbjct: 401 LFRFRARNYFNTLNDVEQQRWLQYCKEVLSIERIEKYMFQLNKLYNLHEKDKEKIVLLHA 460
Query: 346 ANEHDTKILNAL 357
++ KI N L
Sbjct: 461 LFDYVCKIANLL 472
>gi|297578829|ref|ZP_06940757.1| exodeoxyribonuclease I [Vibrio cholerae RC385]
gi|297536423|gb|EFH75256.1| exodeoxyribonuclease I [Vibrio cholerae RC385]
Length = 474
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTGLIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|421351002|ref|ZP_15801367.1| exodeoxyribonuclease I [Vibrio cholerae HE-25]
gi|395951447|gb|EJH62061.1| exodeoxyribonuclease I [Vibrio cholerae HE-25]
Length = 474
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DPK L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPKPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|417320005|ref|ZP_12106551.1| exonuclease I [Vibrio parahaemolyticus 10329]
gi|328472968|gb|EGF43816.1| exonuclease I [Vibrio parahaemolyticus 10329]
Length = 473
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 197/374 (52%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGIEWPENEDGFTSFKLEHLSVKNGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSTEELHERLYTKREDLGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N N KC ++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAE-------NIGIDRQKCLDNLALLRQHPEIREKLIG 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIERQFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRARNF TL +E +RW + F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|117619062|ref|YP_856430.1| exodeoxyribonuclease I [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560469|gb|ABK37417.1| exodeoxyribonuclease I [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 564
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 187/361 (51%), Gaps = 9/361 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSFKLE L+ N +
Sbjct: 207 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWAFDEEGKPSFKLEKLTVANGV 266
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF ++ LR K V A I +P +++ M
Sbjct: 267 AHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGM 326
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 327 FSPWQGCASWVSPLAWHPSNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 386
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++H+N+ P V++ L++ + D K++ + ++F
Sbjct: 387 IPVKLVHINKCP-VLAPAATLTAERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQE 445
Query: 240 KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
N+D + D +LY F D + ++R+ L F F + +L E++F YRA
Sbjct: 446 FAGNND--GDPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRLPEMLFRYRA 503
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLM 359
RN+ TLS E KRW+ + S +++++ Y + LE + + NE + IL +L
Sbjct: 504 RNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEELAEQNQGNERNFAILKSLYH 559
Query: 360 Y 360
Y
Sbjct: 560 Y 560
>gi|254226438|ref|ZP_04920025.1| exodeoxyribonuclease I [Vibrio cholerae V51]
gi|125621060|gb|EAZ49407.1| exodeoxyribonuclease I [Vibrio cholerae V51]
Length = 474
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYTGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|449145183|ref|ZP_21775992.1| Exodeoxyribonuclease I [Vibrio mimicus CAIM 602]
gi|449079219|gb|EMB50144.1| Exodeoxyribonuclease I [Vibrio mimicus CAIM 602]
Length = 474
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 16/370 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ D ++ L + D
Sbjct: 235 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLFDLDAEALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L ++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLEIKVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ + +E IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLVHEHQTDEKKMAILKS 464
Query: 357 LLMYGKSITQ 366
+ Y + +T
Sbjct: 465 VYHYVEKLTH 474
>gi|325928185|ref|ZP_08189394.1| Exodeoxyribonuclease I subunit C [Xanthomonas perforans 91-118]
gi|325541481|gb|EGD13014.1| Exodeoxyribonuclease I subunit C [Xanthomonas perforans 91-118]
Length = 481
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 195/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFQ-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAVAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRRTHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|28898075|ref|NP_797680.1| exonuclease I [Vibrio parahaemolyticus RIMD 2210633]
gi|153836551|ref|ZP_01989218.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AQ3810]
gi|260366376|ref|ZP_05778815.1| exodeoxyribonuclease I [Vibrio parahaemolyticus K5030]
gi|260878424|ref|ZP_05890779.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AN-5034]
gi|260897003|ref|ZP_05905499.1| exodeoxyribonuclease I [Vibrio parahaemolyticus Peru-466]
gi|28806289|dbj|BAC59564.1| exodeoxyribonuclease I [Vibrio parahaemolyticus RIMD 2210633]
gi|149750149|gb|EDM60894.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AQ3810]
gi|308087707|gb|EFO37402.1| exodeoxyribonuclease I [Vibrio parahaemolyticus Peru-466]
gi|308091094|gb|EFO40789.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AN-5034]
gi|308113162|gb|EFO50702.1| exodeoxyribonuclease I [Vibrio parahaemolyticus K5030]
Length = 473
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 197/374 (52%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVKNGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSTEELHERLYTKREDLGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N N KC ++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAE-------NIGIDRQKCLDNLALLRQHPEIREKLIG 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIERQFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRARNF TL +E +RW + F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|261252841|ref|ZP_05945414.1| exodeoxyribonuclease I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417952795|ref|ZP_12595846.1| exonuclease I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260936232|gb|EEX92221.1| exodeoxyribonuclease I [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342818402|gb|EGU53268.1| exonuclease I [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 474
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 189/348 (54%), Gaps = 9/348 (2%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A Y L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACYALRPEGIEWPVNDEGFISFKLEHLSKENGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ ++ P+LF++ LS+R K+ + + P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKVKAAQPKLFDYFLSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP N+N +I +L DP+ L D+ ++ + L K + D
Sbjct: 235 GKECNYTSWVVPVAWHPTNQNAVICVDLAKDPQALLDLDVEQLNERLYTKHSELGPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ +IHLN+ PI ++ K L++ + D N+ + + + + +K+ Y
Sbjct: 295 VPVKLIHLNKCPI-LAPAKTLTAENAEKIGIDREQCLNNL---ALLRQHPEVREKLIGLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ ++D LY+ F S D + I+R P L+ ++ F +++++ L+F YR
Sbjct: 351 SAEREYEKSSDVDTMLYDGFFSPADKTAMDIIRETDPNNLTALDITFNDQRIDPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNK-KNNLYNINMFYLEIESLLKK 345
ARNF TL E +RW + F ++ ++ + N+ E ES KK
Sbjct: 411 ARNFPWTLDESEQQRWANHCRDYFESRIEDYMLNLENLVHEHESDQKK 458
>gi|258620230|ref|ZP_05715269.1| exodeoxyribonuclease I [Vibrio mimicus VM573]
gi|424807827|ref|ZP_18233229.1| exodeoxyribonuclease I [Vibrio mimicus SX-4]
gi|258587588|gb|EEW12298.1| exodeoxyribonuclease I [Vibrio mimicus VM573]
gi|342324364|gb|EGU20145.1| exodeoxyribonuclease I [Vibrio mimicus SX-4]
Length = 474
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 187/353 (52%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ D ++ L + D
Sbjct: 235 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLFDLDAEALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L +++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLDIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +EH T
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLV---HEHQT 454
>gi|262171739|ref|ZP_06039417.1| exodeoxyribonuclease I [Vibrio mimicus MB-451]
gi|261892815|gb|EEY38801.1| exodeoxyribonuclease I [Vibrio mimicus MB-451]
Length = 474
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 187/353 (52%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ D ++ L + D
Sbjct: 235 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLFDLDAEALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L +++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLDIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +EH T
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLV---HEHQT 454
>gi|423206540|ref|ZP_17193096.1| hypothetical protein HMPREF1168_02731 [Aeromonas veronii AMC34]
gi|404622092|gb|EKB18957.1| hypothetical protein HMPREF1168_02731 [Aeromonas veronii AMC34]
Length = 475
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 188/361 (52%), Gaps = 9/361 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSF+LE L+ N +
Sbjct: 118 LYRNFYDPYAYSWQNGNSRWDILDMLRACYALRPEGIEWAFDEEGKPSFRLEKLTVANGV 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF ++ LR K V A I +P +++ M
Sbjct: 178 AHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGM 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS +S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 238 FSPWQGCVSWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 297
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++H+N+ P V++ L++ + D K++ + ++F
Sbjct: 298 IPVKLVHINKCP-VLAPAATLTAERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQE 356
Query: 240 KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
++D + D +LY F D + ++R+ L + F F + +L E++F YRA
Sbjct: 357 FAGSND--SDPDTQLYAGFFGHGDKSTMDLVRATPADLLGDREFAFTDARLPEMLFRYRA 414
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLM 359
RN+ TLS E KRW+ + S +++ + Y + LE + + NE + IL +L
Sbjct: 415 RNWPHTLSETEQKRWRLH-CSDYFSSRLPDY---VPRLEALAEQNQGNERNFAILKSLYR 470
Query: 360 Y 360
Y
Sbjct: 471 Y 471
>gi|422922489|ref|ZP_16955675.1| exodeoxyribonuclease I [Vibrio cholerae BJG-01]
gi|341645964|gb|EGS70084.1| exodeoxyribonuclease I [Vibrio cholerae BJG-01]
Length = 474
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDDLP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|257486439|ref|ZP_05640480.1| exonuclease I, partial [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 341
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 189/346 (54%), Gaps = 12/346 (3%)
Query: 28 KAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNN 87
+A Y L P GI WP + +G+ + KLE L+ N + H +AHDALSDVRAT+ LARLIR
Sbjct: 1 RAAYALRPDGIVWP-EQDGRVTLKLERLTAANGIDHGQAHDALSDVRATIALARLIREKQ 59
Query: 88 PRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILIT 147
P+L++++ +LR K+ V ++ + +P +I+ FS+ +Y+ ++ P+ HP N+N LI
Sbjct: 60 PKLYDYLFALRSKQKVQEQVR--LMQPLVHISGRFSAARNYLGVVLPLAWHPHNRNALIV 117
Query: 148 WNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSPIVISNLKVLSSNL 204
+L DP L +D ++ L + + E +P+ ++H+NR P VI+ L VL S
Sbjct: 118 CDLHLDPSPLLQDDAEILKQRLYTRHEALGEGELPVPLKLLHINRCP-VIAPLGVLRSED 176
Query: 205 MFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELNIDEELYNNFISKKD 263
R + D+ A+ + + +W+ K+ + Y + + +++LY+ FI +D
Sbjct: 177 QQRLQLDMEGYQAR---ATQLSESREVWQDKLSVLYGKEDFAASEDPEQQLYDGFIGDRD 233
Query: 264 NLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFY 323
+R P++L+ + F++ +L EL+F YRARNF +TLS +E +RW+ + R
Sbjct: 234 RRLCEQVRQAEPEQLARDAWPFDDARLPELLFRYRARNFPDTLSSEEQQRWQDFCQQRLS 293
Query: 324 NKKNNLYN-INMFYLEIESLLKKANEHDTKILNALLMYGKSITQKI 368
+ + N + F + A ++L Y +++++++
Sbjct: 294 DPERGAPNTLKDFATALAECSLSAAPEQLEVLRQWQDYAQALSKRL 339
>gi|229521349|ref|ZP_04410768.1| exodeoxyribonuclease I [Vibrio cholerae TM 11079-80]
gi|229341447|gb|EEO06450.1| exodeoxyribonuclease I [Vibrio cholerae TM 11079-80]
Length = 478
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 119 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 178
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 179 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 238
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 239 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 298
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 299 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 354
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 355 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 414
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 415 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 468
Query: 357 LLMY 360
+ Y
Sbjct: 469 VYHY 472
>gi|417824300|ref|ZP_12470891.1| exodeoxyribonuclease I [Vibrio cholerae HE48]
gi|419836088|ref|ZP_14359531.1| exodeoxyribonuclease I [Vibrio cholerae HC-46B1]
gi|421342901|ref|ZP_15793306.1| exodeoxyribonuclease I [Vibrio cholerae HC-43B1]
gi|421354003|ref|ZP_15804335.1| exodeoxyribonuclease I [Vibrio cholerae HE-45]
gi|422306834|ref|ZP_16394005.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|423734635|ref|ZP_17707847.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|424008919|ref|ZP_17751866.1| exodeoxyribonuclease I [Vibrio cholerae HC-44C1]
gi|340047985|gb|EGR08908.1| exodeoxyribonuclease I [Vibrio cholerae HE48]
gi|395943418|gb|EJH54093.1| exodeoxyribonuclease I [Vibrio cholerae HC-43B1]
gi|395953128|gb|EJH63741.1| exodeoxyribonuclease I [Vibrio cholerae HE-45]
gi|408625182|gb|EKK98099.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|408630936|gb|EKL03508.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|408857953|gb|EKL97632.1| exodeoxyribonuclease I [Vibrio cholerae HC-46B1]
gi|408865070|gb|EKM04482.1| exodeoxyribonuclease I [Vibrio cholerae HC-44C1]
Length = 474
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|21242349|ref|NP_641931.1| exonuclease I [Xanthomonas axonopodis pv. citri str. 306]
gi|21107784|gb|AAM36467.1| exodeoxyribonuclease I [Xanthomonas axonopodis pv. citri str. 306]
Length = 481
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ A + +P +++
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAAALLDVIAMQPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAAVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLQDRGLGEVTLEQYHAQIADLRGAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|269962181|ref|ZP_06176534.1| exodeoxyribonuclease I [Vibrio harveyi 1DA3]
gi|269833012|gb|EEZ87118.1| exodeoxyribonuclease I [Vibrio harveyi 1DA3]
Length = 427
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 201/371 (54%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 69 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 128
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 129 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFYSMRNKRKLNELVDIVNMTPLMHVSGMM 188
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K+ + +
Sbjct: 189 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKREELGDLLPV 248
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + + I +K+
Sbjct: 249 PVKLVHLNKCPI-LAPAKTLTAENAEVIGIDRQKCLSNL---ALLRQHPEIREKLISLFS 304
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 305 IEREFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 361
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRAR++ TL +E +RW ++ F ++ I + L +E+L+ +++E IL
Sbjct: 362 YRARHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKIAIL 415
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 416 KSVYRYVESLA 426
>gi|417340866|ref|ZP_12122086.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|357958599|gb|EHJ83151.1| Exodeoxyribonuclease 1 [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
Length = 487
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 179/335 (53%), Gaps = 24/335 (7%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTRANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNP-----------RLFNFILSLRKKKYVLAEIGW 109
+ H AHDA++DV AT+ +A+L++ P RLF+++ S R K + A I
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRPTGENTPAAARLFDYLYSHRSKHKLAALIDV 235
Query: 110 PIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL 169
P +P +++ MF + S + P+ HP N+N +I +L D L D + +R+ L
Sbjct: 236 PQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERL 295
Query: 170 CFKKNSFKED--IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILN 227
K + +P+ ++H+N+ P V++ L R + N+K +
Sbjct: 296 YTAKADLGDHAAVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRE 351
Query: 228 NTYIWKK---IFLDYK-INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNF 283
N + K IF + + SD N+D +LY+ F S D + I+ P+ L ++
Sbjct: 352 NPQVRDKVVAIFAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDI 408
Query: 284 CFENKKLEELIFLYRARNFIETLSYKELKRWKKYR 318
F +K++E+L+F YRARNF TL E +RW ++R
Sbjct: 409 TFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLEHR 443
>gi|424040996|ref|ZP_17779029.1| exodeoxyribonuclease I [Vibrio cholerae HENC-02]
gi|408891230|gb|EKM29101.1| exodeoxyribonuclease I [Vibrio cholerae HENC-02]
Length = 473
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 202/371 (54%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFYSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K++ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ ++HLN+ PI ++ K L++ D N+ + + + I +K+
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAEVIGIDRQQCLNNL---ALLRQHPEIREKLISLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F
Sbjct: 351 IEREFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKIL 354
YRAR++ TL +E +RW ++ F ++ I + + +E+L+ +++E IL
Sbjct: 408 YRARHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMMNLENLVHEHESDEKKIAIL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|424031589|ref|ZP_17771023.1| exodeoxyribonuclease I [Vibrio cholerae HENC-01]
gi|408877310|gb|EKM16376.1| exodeoxyribonuclease I [Vibrio cholerae HENC-01]
Length = 473
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 200/368 (54%), Gaps = 15/368 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K++ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKRDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ + + + I +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAEVIGIDRQQCLNNL---ALLRQHPEIREKLISLFS 350
Query: 241 INNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
I + ++D +LY+ F S D + I+R P L+ ++ F++K+++ L+F YRA
Sbjct: 351 IEREFEKSNDVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNAL 357
R++ TL +E +RW ++ F ++ I + + +E+L+ +++E IL ++
Sbjct: 411 RHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMMNLENLVHEHESDEKKIAILKSV 464
Query: 358 LMYGKSIT 365
Y +S+
Sbjct: 465 YRYVESLA 472
>gi|153801904|ref|ZP_01956490.1| exodeoxyribonuclease I [Vibrio cholerae MZO-3]
gi|124122549|gb|EAY41292.1| exodeoxyribonuclease I [Vibrio cholerae MZO-3]
Length = 474
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 193/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQRGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQERGFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|429885519|ref|ZP_19367104.1| Exodeoxyribonuclease I [Vibrio cholerae PS15]
gi|429227636|gb|EKY33625.1| Exodeoxyribonuclease I [Vibrio cholerae PS15]
Length = 474
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQTRLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|419829806|ref|ZP_14353292.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|419832779|ref|ZP_14356241.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|422916993|ref|ZP_16951321.1| exodeoxyribonuclease I [Vibrio cholerae HC-02A1]
gi|423819663|ref|ZP_17715921.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|423852996|ref|ZP_17719714.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|423880420|ref|ZP_17723316.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|423997408|ref|ZP_17740667.1| exodeoxyribonuclease I [Vibrio cholerae HC-02C1]
gi|424016117|ref|ZP_17755958.1| exodeoxyribonuclease I [Vibrio cholerae HC-55B2]
gi|424019053|ref|ZP_17758849.1| exodeoxyribonuclease I [Vibrio cholerae HC-59B1]
gi|424624598|ref|ZP_18063070.1| exodeoxyribonuclease I [Vibrio cholerae HC-50A1]
gi|424629097|ref|ZP_18067394.1| exodeoxyribonuclease I [Vibrio cholerae HC-51A1]
gi|424633129|ref|ZP_18071239.1| exodeoxyribonuclease I [Vibrio cholerae HC-52A1]
gi|424636218|ref|ZP_18074233.1| exodeoxyribonuclease I [Vibrio cholerae HC-55A1]
gi|424640157|ref|ZP_18078047.1| exodeoxyribonuclease I [Vibrio cholerae HC-56A1]
gi|424648192|ref|ZP_18085862.1| exodeoxyribonuclease I [Vibrio cholerae HC-57A1]
gi|443527015|ref|ZP_21093081.1| exodeoxyribonuclease I [Vibrio cholerae HC-78A1]
gi|341638386|gb|EGS63033.1| exodeoxyribonuclease I [Vibrio cholerae HC-02A1]
gi|408014305|gb|EKG51959.1| exodeoxyribonuclease I [Vibrio cholerae HC-50A1]
gi|408019944|gb|EKG57313.1| exodeoxyribonuclease I [Vibrio cholerae HC-52A1]
gi|408025029|gb|EKG62099.1| exodeoxyribonuclease I [Vibrio cholerae HC-56A1]
gi|408025758|gb|EKG62804.1| exodeoxyribonuclease I [Vibrio cholerae HC-55A1]
gi|408034762|gb|EKG71247.1| exodeoxyribonuclease I [Vibrio cholerae HC-57A1]
gi|408057493|gb|EKG92339.1| exodeoxyribonuclease I [Vibrio cholerae HC-51A1]
gi|408621391|gb|EKK94394.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|408635947|gb|EKL08123.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|408642757|gb|EKL14501.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|408643266|gb|EKL14996.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|408651423|gb|EKL22679.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|408853504|gb|EKL93294.1| exodeoxyribonuclease I [Vibrio cholerae HC-02C1]
gi|408861189|gb|EKM00788.1| exodeoxyribonuclease I [Vibrio cholerae HC-55B2]
gi|408868767|gb|EKM08081.1| exodeoxyribonuclease I [Vibrio cholerae HC-59B1]
gi|443454591|gb|ELT18392.1| exodeoxyribonuclease I [Vibrio cholerae HC-78A1]
Length = 474
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEPEFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|384424373|ref|YP_005633731.1| Exodeoxyribonuclease I [Vibrio cholerae LMA3984-4]
gi|327483926|gb|AEA78333.1| Exodeoxyribonuclease I [Vibrio cholerae LMA3984-4]
Length = 474
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|153829736|ref|ZP_01982403.1| exodeoxyribonuclease I [Vibrio cholerae 623-39]
gi|262191424|ref|ZP_06049612.1| exodeoxyribonuclease I [Vibrio cholerae CT 5369-93]
gi|148874770|gb|EDL72905.1| exodeoxyribonuclease I [Vibrio cholerae 623-39]
gi|262032713|gb|EEY51263.1| exodeoxyribonuclease I [Vibrio cholerae CT 5369-93]
Length = 474
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|424669363|ref|ZP_18106388.1| hypothetical protein A1OC_02968 [Stenotrophomonas maltophilia
Ab55555]
gi|401071434|gb|EJP79945.1| hypothetical protein A1OC_02968 [Stenotrophomonas maltophilia
Ab55555]
Length = 479
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANQV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+++ L LR K++V + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWDYALKLRDKRFVGGLLDVAAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L + L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYMRASELPEGAA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRAATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---ILN 355
ARN ++L+ E +RW+ YR R Y + L DT+ +L
Sbjct: 407 ARNHPDSLAPPERQRWQDYRRQRLLGDGGLGELNLPQYQQQLDALATEAPDDTRRQALLQ 466
Query: 356 ALLMYGKSITQKI 368
+L +G+ + + +
Sbjct: 467 SLRDWGQHLQETL 479
>gi|344208018|ref|YP_004793159.1| exodeoxyribonuclease I [Stenotrophomonas maltophilia JV3]
gi|343779380|gb|AEM51933.1| Exodeoxyribonuclease I [Stenotrophomonas maltophilia JV3]
Length = 479
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 174/323 (53%), Gaps = 6/323 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+++ L LR K++V + + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWDYALKLRDKRFVGSLLDVAAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L + L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYMRASELPEGVA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRAATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISR 321
ARN ++L+ E +RW+ YR R
Sbjct: 407 ARNHPDSLAPAERQRWQDYRRQR 429
>gi|254291686|ref|ZP_04962473.1| exodeoxyribonuclease I [Vibrio cholerae AM-19226]
gi|150422370|gb|EDN14330.1| exodeoxyribonuclease I [Vibrio cholerae AM-19226]
Length = 474
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 188/355 (52%), Gaps = 14/355 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRDRHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ + KI
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYLLNLENLVHEHQADPKKI 459
>gi|325276504|ref|ZP_08142261.1| exonuclease I [Pseudomonas sp. TJI-51]
gi|324098364|gb|EGB96453.1| exonuclease I [Pseudomonas sp. TJI-51]
Length = 355
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 189/361 (52%), Gaps = 18/361 (4%)
Query: 15 KNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVR 74
+ SRWDLI++++ Y L P GI WP + +G+ S +LE LS N + H AH+ALSDVR
Sbjct: 1 QGGTSRWDLIDIVRTAYALRPEGIEWP-QQDGRTSLRLELLSKANGIDHGHAHEALSDVR 59
Query: 75 ATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWP 134
AT+ LARLIR P+L++++ LR K V+ +I + +P +++ FS+ +Y+ ++ P
Sbjct: 60 ATIALARLIRQKQPKLYDWLFQLRSKHKVMEQIR--LLQPLVHVSGRFSAARNYLGVVLP 117
Query: 135 ICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSP 191
+ HP N+N LI +L + L +R L + + +P+ ++ +NR P
Sbjct: 118 LAWHPHNRNALIVCDLHQETLPLLRESAEVLRQRLYTRHEDLADGELPVPLKLVQINRCP 177
Query: 192 IVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELNI 250
V++ L VL R DL + + W+ K+ Y ++ +
Sbjct: 178 -VLAPLSVLRPADQQRLGIDLTLLQSR---GEQLADQQAQWQDKLEHIYGKDDFAPSEDP 233
Query: 251 DEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKE 310
+++LYN FI +D +R++ P +L + F++ +L EL+F YRARNF +TL+ +E
Sbjct: 234 EQQLYNGFIGDRDRRLCEQVRALEPAQLGRGQWLFDDPRLPELLFRYRARNFPDTLTPEE 293
Query: 311 LKRWKKYRISRF----YNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLMYGKSITQ 366
+RW + R + N L + L+ ++A+E ++L A ++ +++ Q
Sbjct: 294 RQRWYAFCQQRLSQPQWGAPNTLGDFEQARLQA---WERADEAGRRVLEAWQVHARNLQQ 350
Query: 367 K 367
+
Sbjct: 351 Q 351
>gi|229505177|ref|ZP_04394687.1| exodeoxyribonuclease I [Vibrio cholerae BX 330286]
gi|229511152|ref|ZP_04400631.1| exodeoxyribonuclease I [Vibrio cholerae B33]
gi|229518270|ref|ZP_04407714.1| exodeoxyribonuclease I [Vibrio cholerae RC9]
gi|229608197|ref|YP_002878845.1| exonuclease I [Vibrio cholerae MJ-1236]
gi|229344985|gb|EEO09959.1| exodeoxyribonuclease I [Vibrio cholerae RC9]
gi|229351117|gb|EEO16058.1| exodeoxyribonuclease I [Vibrio cholerae B33]
gi|229357400|gb|EEO22317.1| exodeoxyribonuclease I [Vibrio cholerae BX 330286]
gi|229370852|gb|ACQ61275.1| exodeoxyribonuclease I [Vibrio cholerae MJ-1236]
Length = 478
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 119 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 178
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 179 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 238
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 239 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 298
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 299 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 354
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 355 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYR 414
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 415 ARHYPHTLTDTEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 468
Query: 357 LLMY 360
+ Y
Sbjct: 469 VYHY 472
>gi|15641247|ref|NP_230879.1| exonuclease I [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591211|ref|ZP_01678513.1| exodeoxyribonuclease I [Vibrio cholerae 2740-80]
gi|121728822|ref|ZP_01681834.1| exodeoxyribonuclease I [Vibrio cholerae V52]
gi|147674379|ref|YP_001216801.1| exonuclease I [Vibrio cholerae O395]
gi|153819174|ref|ZP_01971841.1| exodeoxyribonuclease I [Vibrio cholerae NCTC 8457]
gi|153823017|ref|ZP_01975684.1| exodeoxyribonuclease I [Vibrio cholerae B33]
gi|227081406|ref|YP_002809957.1| exonuclease I [Vibrio cholerae M66-2]
gi|227117701|ref|YP_002819597.1| exodeoxyribonuclease I [Vibrio cholerae O395]
gi|254848359|ref|ZP_05237709.1| exonuclease I [Vibrio cholerae MO10]
gi|255745633|ref|ZP_05419581.1| exodeoxyribonuclease I [Vibrio cholera CIRS 101]
gi|262159091|ref|ZP_06030203.1| exodeoxyribonuclease I [Vibrio cholerae INDRE 91/1]
gi|262169449|ref|ZP_06037141.1| exodeoxyribonuclease I [Vibrio cholerae RC27]
gi|298498672|ref|ZP_07008479.1| exonuclease I [Vibrio cholerae MAK 757]
gi|379741048|ref|YP_005333017.1| exonuclease I [Vibrio cholerae IEC224]
gi|417813257|ref|ZP_12459914.1| exodeoxyribonuclease I [Vibrio cholerae HC-49A2]
gi|417816122|ref|ZP_12462754.1| exodeoxyribonuclease I [Vibrio cholerae HCUF01]
gi|418332270|ref|ZP_12943204.1| exodeoxyribonuclease I [Vibrio cholerae HC-06A1]
gi|418337013|ref|ZP_12945911.1| exodeoxyribonuclease I [Vibrio cholerae HC-23A1]
gi|418343527|ref|ZP_12950313.1| exodeoxyribonuclease I [Vibrio cholerae HC-28A1]
gi|418348681|ref|ZP_12953415.1| exodeoxyribonuclease I [Vibrio cholerae HC-43A1]
gi|418354955|ref|ZP_12957676.1| exodeoxyribonuclease I [Vibrio cholerae HC-61A1]
gi|421316010|ref|ZP_15766581.1| exodeoxyribonuclease I [Vibrio cholerae CP1032(5)]
gi|421320849|ref|ZP_15771406.1| exodeoxyribonuclease I [Vibrio cholerae CP1038(11)]
gi|421324841|ref|ZP_15775367.1| exodeoxyribonuclease I [Vibrio cholerae CP1041(14)]
gi|421328503|ref|ZP_15779017.1| exodeoxyribonuclease I [Vibrio cholerae CP1042(15)]
gi|421331524|ref|ZP_15782004.1| exodeoxyribonuclease I [Vibrio cholerae CP1046(19)]
gi|421335097|ref|ZP_15785564.1| exodeoxyribonuclease I [Vibrio cholerae CP1048(21)]
gi|421338992|ref|ZP_15789427.1| exodeoxyribonuclease I [Vibrio cholerae HC-20A2]
gi|421346852|ref|ZP_15797234.1| exodeoxyribonuclease I [Vibrio cholerae HC-46A1]
gi|422891344|ref|ZP_16933724.1| exodeoxyribonuclease I [Vibrio cholerae HC-40A1]
gi|422902555|ref|ZP_16937554.1| exodeoxyribonuclease I [Vibrio cholerae HC-48A1]
gi|422906434|ref|ZP_16941266.1| exodeoxyribonuclease I [Vibrio cholerae HC-70A1]
gi|422913020|ref|ZP_16947539.1| exodeoxyribonuclease I [Vibrio cholerae HFU-02]
gi|422925500|ref|ZP_16958525.1| exodeoxyribonuclease I [Vibrio cholerae HC-38A1]
gi|423144822|ref|ZP_17132431.1| exodeoxyribonuclease I [Vibrio cholerae HC-19A1]
gi|423149500|ref|ZP_17136828.1| exodeoxyribonuclease I [Vibrio cholerae HC-21A1]
gi|423153316|ref|ZP_17140510.1| exodeoxyribonuclease I [Vibrio cholerae HC-22A1]
gi|423156128|ref|ZP_17143232.1| exodeoxyribonuclease I [Vibrio cholerae HC-32A1]
gi|423159955|ref|ZP_17146923.1| exodeoxyribonuclease I [Vibrio cholerae HC-33A2]
gi|423164673|ref|ZP_17151431.1| exodeoxyribonuclease I [Vibrio cholerae HC-48B2]
gi|423730802|ref|ZP_17704116.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|423753965|ref|ZP_17712123.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|423892494|ref|ZP_17726177.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|423927272|ref|ZP_17730794.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|424001816|ref|ZP_17744902.1| exodeoxyribonuclease I [Vibrio cholerae HC-17A2]
gi|424005976|ref|ZP_17748956.1| exodeoxyribonuclease I [Vibrio cholerae HC-37A1]
gi|424023995|ref|ZP_17763655.1| exodeoxyribonuclease I [Vibrio cholerae HC-62B1]
gi|424026846|ref|ZP_17766459.1| exodeoxyribonuclease I [Vibrio cholerae HC-69A1]
gi|424590469|ref|ZP_18029906.1| exodeoxyribonuclease I [Vibrio cholerae CP1037(10)]
gi|424594816|ref|ZP_18034149.1| exodeoxyribonuclease I [Vibrio cholerae CP1040(13)]
gi|424598683|ref|ZP_18037877.1| exodeoxyribonuclease I [Vibrio Cholerae CP1044(17)]
gi|424601423|ref|ZP_18040576.1| exodeoxyribonuclease I [Vibrio cholerae CP1047(20)]
gi|424606412|ref|ZP_18045372.1| exodeoxyribonuclease I [Vibrio cholerae CP1050(23)]
gi|424610243|ref|ZP_18049097.1| exodeoxyribonuclease I [Vibrio cholerae HC-39A1]
gi|424613049|ref|ZP_18051852.1| exodeoxyribonuclease I [Vibrio cholerae HC-41A1]
gi|424616866|ref|ZP_18055553.1| exodeoxyribonuclease I [Vibrio cholerae HC-42A1]
gi|424621815|ref|ZP_18060338.1| exodeoxyribonuclease I [Vibrio cholerae HC-47A1]
gi|424644792|ref|ZP_18082540.1| exodeoxyribonuclease I [Vibrio cholerae HC-56A2]
gi|424652469|ref|ZP_18089945.1| exodeoxyribonuclease I [Vibrio cholerae HC-57A2]
gi|440709498|ref|ZP_20890155.1| exodeoxyribonuclease I [Vibrio cholerae 4260B]
gi|443503323|ref|ZP_21070304.1| exodeoxyribonuclease I [Vibrio cholerae HC-64A1]
gi|443507230|ref|ZP_21074014.1| exodeoxyribonuclease I [Vibrio cholerae HC-65A1]
gi|443511356|ref|ZP_21078011.1| exodeoxyribonuclease I [Vibrio cholerae HC-67A1]
gi|443514910|ref|ZP_21081438.1| exodeoxyribonuclease I [Vibrio cholerae HC-68A1]
gi|443518710|ref|ZP_21085120.1| exodeoxyribonuclease I [Vibrio cholerae HC-71A1]
gi|443523598|ref|ZP_21089826.1| exodeoxyribonuclease I [Vibrio cholerae HC-72A2]
gi|443531211|ref|ZP_21097226.1| exodeoxyribonuclease I [Vibrio cholerae HC-7A1]
gi|443534985|ref|ZP_21100880.1| exodeoxyribonuclease I [Vibrio cholerae HC-80A1]
gi|443538553|ref|ZP_21104408.1| exodeoxyribonuclease I [Vibrio cholerae HC-81A1]
gi|449056272|ref|ZP_21734940.1| Exodeoxyribonuclease I [Vibrio cholerae O1 str. Inaba G4222]
gi|9655715|gb|AAF94393.1| exodeoxyribonuclease I [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546936|gb|EAX57085.1| exodeoxyribonuclease I [Vibrio cholerae 2740-80]
gi|121628910|gb|EAX61366.1| exodeoxyribonuclease I [Vibrio cholerae V52]
gi|126510260|gb|EAZ72854.1| exodeoxyribonuclease I [Vibrio cholerae NCTC 8457]
gi|126519445|gb|EAZ76668.1| exodeoxyribonuclease I [Vibrio cholerae B33]
gi|146316262|gb|ABQ20801.1| exodeoxyribonuclease I [Vibrio cholerae O395]
gi|227009294|gb|ACP05506.1| exodeoxyribonuclease I [Vibrio cholerae M66-2]
gi|227013151|gb|ACP09361.1| exodeoxyribonuclease I [Vibrio cholerae O395]
gi|254844064|gb|EET22478.1| exonuclease I [Vibrio cholerae MO10]
gi|255736708|gb|EET92105.1| exodeoxyribonuclease I [Vibrio cholera CIRS 101]
gi|262022262|gb|EEY40971.1| exodeoxyribonuclease I [Vibrio cholerae RC27]
gi|262029276|gb|EEY47928.1| exodeoxyribonuclease I [Vibrio cholerae INDRE 91/1]
gi|297543005|gb|EFH79055.1| exonuclease I [Vibrio cholerae MAK 757]
gi|340041848|gb|EGR02814.1| exodeoxyribonuclease I [Vibrio cholerae HCUF01]
gi|340042561|gb|EGR03526.1| exodeoxyribonuclease I [Vibrio cholerae HC-49A2]
gi|341623569|gb|EGS49093.1| exodeoxyribonuclease I [Vibrio cholerae HC-70A1]
gi|341623641|gb|EGS49164.1| exodeoxyribonuclease I [Vibrio cholerae HC-48A1]
gi|341624638|gb|EGS50123.1| exodeoxyribonuclease I [Vibrio cholerae HC-40A1]
gi|341639457|gb|EGS64074.1| exodeoxyribonuclease I [Vibrio cholerae HFU-02]
gi|341647370|gb|EGS71452.1| exodeoxyribonuclease I [Vibrio cholerae HC-38A1]
gi|356419081|gb|EHH72639.1| exodeoxyribonuclease I [Vibrio cholerae HC-06A1]
gi|356419769|gb|EHH73306.1| exodeoxyribonuclease I [Vibrio cholerae HC-21A1]
gi|356424988|gb|EHH78377.1| exodeoxyribonuclease I [Vibrio cholerae HC-19A1]
gi|356431532|gb|EHH84736.1| exodeoxyribonuclease I [Vibrio cholerae HC-22A1]
gi|356432591|gb|EHH85788.1| exodeoxyribonuclease I [Vibrio cholerae HC-23A1]
gi|356436271|gb|EHH89389.1| exodeoxyribonuclease I [Vibrio cholerae HC-28A1]
gi|356441802|gb|EHH94678.1| exodeoxyribonuclease I [Vibrio cholerae HC-32A1]
gi|356447420|gb|EHI00211.1| exodeoxyribonuclease I [Vibrio cholerae HC-43A1]
gi|356449071|gb|EHI01831.1| exodeoxyribonuclease I [Vibrio cholerae HC-33A2]
gi|356453357|gb|EHI06020.1| exodeoxyribonuclease I [Vibrio cholerae HC-61A1]
gi|356455482|gb|EHI08124.1| exodeoxyribonuclease I [Vibrio cholerae HC-48B2]
gi|378794558|gb|AFC58029.1| exonuclease I [Vibrio cholerae IEC224]
gi|395920511|gb|EJH31333.1| exodeoxyribonuclease I [Vibrio cholerae CP1041(14)]
gi|395920967|gb|EJH31787.1| exodeoxyribonuclease I [Vibrio cholerae CP1032(5)]
gi|395923831|gb|EJH34642.1| exodeoxyribonuclease I [Vibrio cholerae CP1038(11)]
gi|395930009|gb|EJH40758.1| exodeoxyribonuclease I [Vibrio cholerae CP1042(15)]
gi|395932788|gb|EJH43531.1| exodeoxyribonuclease I [Vibrio cholerae CP1046(19)]
gi|395936958|gb|EJH47681.1| exodeoxyribonuclease I [Vibrio cholerae CP1048(21)]
gi|395943940|gb|EJH54614.1| exodeoxyribonuclease I [Vibrio cholerae HC-20A2]
gi|395945912|gb|EJH56576.1| exodeoxyribonuclease I [Vibrio cholerae HC-46A1]
gi|395960715|gb|EJH71076.1| exodeoxyribonuclease I [Vibrio cholerae HC-56A2]
gi|395961771|gb|EJH72082.1| exodeoxyribonuclease I [Vibrio cholerae HC-57A2]
gi|395965117|gb|EJH75301.1| exodeoxyribonuclease I [Vibrio cholerae HC-42A1]
gi|395972360|gb|EJH81954.1| exodeoxyribonuclease I [Vibrio cholerae HC-47A1]
gi|395977805|gb|EJH87203.1| exodeoxyribonuclease I [Vibrio cholerae CP1047(20)]
gi|408008477|gb|EKG46455.1| exodeoxyribonuclease I [Vibrio cholerae HC-39A1]
gi|408014890|gb|EKG52506.1| exodeoxyribonuclease I [Vibrio cholerae HC-41A1]
gi|408034561|gb|EKG71054.1| exodeoxyribonuclease I [Vibrio cholerae CP1037(10)]
gi|408035089|gb|EKG71568.1| exodeoxyribonuclease I [Vibrio cholerae CP1040(13)]
gi|408043753|gb|EKG79733.1| exodeoxyribonuclease I [Vibrio Cholerae CP1044(17)]
gi|408045109|gb|EKG80976.1| exodeoxyribonuclease I [Vibrio cholerae CP1050(23)]
gi|408625558|gb|EKK98464.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|408638606|gb|EKL10494.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|408656434|gb|EKL27529.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|408657667|gb|EKL28744.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|408847375|gb|EKL87446.1| exodeoxyribonuclease I [Vibrio cholerae HC-37A1]
gi|408848564|gb|EKL88612.1| exodeoxyribonuclease I [Vibrio cholerae HC-17A2]
gi|408871613|gb|EKM10847.1| exodeoxyribonuclease I [Vibrio cholerae HC-62B1]
gi|408879930|gb|EKM18867.1| exodeoxyribonuclease I [Vibrio cholerae HC-69A1]
gi|439975087|gb|ELP51223.1| exodeoxyribonuclease I [Vibrio cholerae 4260B]
gi|443432278|gb|ELS74807.1| exodeoxyribonuclease I [Vibrio cholerae HC-64A1]
gi|443436263|gb|ELS82386.1| exodeoxyribonuclease I [Vibrio cholerae HC-65A1]
gi|443439531|gb|ELS89229.1| exodeoxyribonuclease I [Vibrio cholerae HC-67A1]
gi|443443740|gb|ELS97025.1| exodeoxyribonuclease I [Vibrio cholerae HC-68A1]
gi|443447759|gb|ELT04401.1| exodeoxyribonuclease I [Vibrio cholerae HC-71A1]
gi|443450330|gb|ELT10606.1| exodeoxyribonuclease I [Vibrio cholerae HC-72A2]
gi|443458294|gb|ELT25690.1| exodeoxyribonuclease I [Vibrio cholerae HC-7A1]
gi|443461847|gb|ELT32903.1| exodeoxyribonuclease I [Vibrio cholerae HC-80A1]
gi|443466142|gb|ELT40801.1| exodeoxyribonuclease I [Vibrio cholerae HC-81A1]
gi|448264095|gb|EMB01334.1| Exodeoxyribonuclease I [Vibrio cholerae O1 str. Inaba G4222]
Length = 474
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDTEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|190575052|ref|YP_001972897.1| exonuclease I [Stenotrophomonas maltophilia K279a]
gi|190012974|emb|CAQ46606.1| putative exodeoxyribonuclease I [Stenotrophomonas maltophilia
K279a]
Length = 479
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANHV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+++ L LR K++V + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWDYALKLRDKRFVGGLLDVAAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L + L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYMRASELPEGVA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRAATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---ILN 355
ARN ++L+ E +RW+ YR R Y + L DT+ +L
Sbjct: 407 ARNHPDSLAPPERQRWQDYRRQRLLGDGGLGELNLPQYQQQLDALAAEAPDDTRRQALLQ 466
Query: 356 ALLMYGKSITQKI 368
+L +G+ + + +
Sbjct: 467 SLRDWGQHLQETL 479
>gi|153826959|ref|ZP_01979626.1| exodeoxyribonuclease I [Vibrio cholerae MZO-2]
gi|149739207|gb|EDM53479.1| exodeoxyribonuclease I [Vibrio cholerae MZO-2]
Length = 474
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQTRLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + + +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEVREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|229525835|ref|ZP_04415240.1| exodeoxyribonuclease I [Vibrio cholerae bv. albensis VL426]
gi|229339416|gb|EEO04433.1| exodeoxyribonuclease I [Vibrio cholerae bv. albensis VL426]
Length = 478
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 119 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 178
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 179 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 238
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ + D ++ L + D
Sbjct: 239 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLMDLDAETLQARLYTRYEDLAPDELP 298
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 299 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 354
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 355 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 414
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 415 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 468
Query: 357 LLMY 360
+ Y
Sbjct: 469 VYHY 472
>gi|9107140|gb|AAF84824.1|AE004021_1 exodeoxyribonuclease I [Xylella fastidiosa 9a5c]
Length = 494
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + L P GI WP + +G PSFKLEHL+ N+
Sbjct: 126 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGAPSFKLEHLALANHA 185
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 186 REGAAHEALSDVYATISMARKFRTAQPRLWNYALQLRDKRFCATLLDITSIQPVLHISQR 245
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP N +I ++L D L I D L E
Sbjct: 246 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADRLYTPTVDLPEGEQ 305
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + L+ K A + +K+
Sbjct: 306 RIPLKEVHLNKVPALIAWNNLRASDFT---RLGLDADMLETKAAQLRACGPDLAEKVRHV 362
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D +L LR+ P L+ + +L EL+F
Sbjct: 363 FSHTYNTAN---DADASLYDGFLTEEDRRRLPQLRASPPDTLATFEQHLRDPRLIELLFR 419
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + ++ ++ +I L +E K +
Sbjct: 420 YRARNFPETLSCDEQTRWDTYRRHRLTTDAGLSELTLDQYHAQIAELRMTHSEDVAKQLL 479
Query: 354 LNALLMYGKSIT 365
L+ L +G ++
Sbjct: 480 LDQLASWGSELS 491
>gi|365540044|ref|ZP_09365219.1| exonuclease I [Vibrio ordalii ATCC 33509]
Length = 474
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 198/372 (53%), Gaps = 22/372 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HANAHDAMADVIATIELAKKVKAAQPKLFDYFFNMRHKRKLNDLIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L +P+ + ++ L K+ ED
Sbjct: 235 GRECQYTSWIVPIAWHPTNQNAVIVVDLAKNPQPLIDLSSEELHQRLYTKREELAEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++HLN+ PI ++ K L++ D + +++ + I I +K+ Y
Sbjct: 295 VPIKLVHLNKCPI-LAPAKTLTAENADHIGVDRDLCLEHL---ALIKQYPEIREKLIGLY 350
Query: 240 KIN----NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
I +SD ++D +LY+ F S D + I+R P L+ ++ F +K++E L+F
Sbjct: 351 TIEREYKHSD---DVDTQLYDGFFSPADKAAMEIIRQADPVNLAALDISFSDKRIEPLLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKI 353
YRARN+ TLS +E +RW + F + ++ + L +E+L+ ++E I
Sbjct: 408 RYRARNYPLTLSDEEQRRWATHCRDYFES------HLGEYMLNLENLVHTHSSDEKKMAI 461
Query: 354 LNALLMYGKSIT 365
L ++ Y + I
Sbjct: 462 LKSVYRYVEDIA 473
>gi|360035134|ref|YP_004936897.1| exonuclease I [Vibrio cholerae O1 str. 2010EL-1786]
gi|356646288|gb|AET26343.1| exonuclease I [Vibrio cholerae O1 str. 2010EL-1786]
Length = 494
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 135 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 194
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 195 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 254
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 255 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 314
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 315 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 370
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 371 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYR 430
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 431 ARHYPHTLTDTEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 484
Query: 357 LLMY 360
+ Y
Sbjct: 485 VYHY 488
>gi|161378162|ref|NP_299304.2| exonuclease I [Xylella fastidiosa 9a5c]
Length = 478
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 186/372 (50%), Gaps = 14/372 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + L P GI WP + +G PSFKLEHL+ N+
Sbjct: 110 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGAPSFKLEHLALANHA 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 170 REGAAHEALSDVYATISMARKFRTAQPRLWNYALQLRDKRFCATLLDITSIQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP N +I ++L D L I D L E
Sbjct: 230 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADRLYTPTVDLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + L+ K A + +K+
Sbjct: 290 RIPLKEVHLNKVPALIAWNNLRASDFT---RLGLDADMLETKAAQLRACGPDLAEKVRHV 346
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D +L LR+ P L+ + +L EL+F
Sbjct: 347 FSHTYNTAN---DADASLYDGFLTEEDRRRLPQLRASPPDTLATFEQHLRDPRLIELLFR 403
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + ++ ++ +I L +E K +
Sbjct: 404 YRARNFPETLSCDEQTRWDTYRRHRLTTDAGLSELTLDQYHAQIAELRMTHSEDVAKQLL 463
Query: 354 LNALLMYGKSIT 365
L+ L +G ++
Sbjct: 464 LDQLASWGSELS 475
>gi|433675864|ref|ZP_20508050.1| exonuclease I [Xanthomonas translucens pv. translucens DSM 18974]
gi|430819020|emb|CCP38294.1| exonuclease I [Xanthomonas translucens pv. translucens DSM 18974]
Length = 479
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 190/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL+++++ + L P GI WP + +G SFKLE L+ N +
Sbjct: 110 LFRNFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALANGV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+ARL R + PRL+++ L LR K++ + +P +++
Sbjct: 170 RDGDAHEALSDVYATIGMARLFREHQPRLWDYALKLRDKRFCGGLLDVVAMQPVLHVSMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + ++ ++L D + L +I D L + E
Sbjct: 230 YPAARLCAAPVLPLARHPRIDSRVLVFDLEGDIEPLLRYTPEQIADRLYTPQADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN++P +++ + + + ++ A K A + +K+
Sbjct: 290 RIPLKEVHLNKAPALVAWSHLRDPDFA---RLQIDPAQILAKAARLREAGPELAEKVRRV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + ++D LY+ F++ D +A +R+ P +L+ + F + +L EL+F YR
Sbjct: 347 FGNERASAPADVDASLYDGFLADTDKRAMAQVRATPPAQLAPLEHGFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--ILN 355
ARN+ +TLS E RW YR R + + + + ++ L + TK +L+
Sbjct: 407 ARNWPQTLSIAEQGRWDDYRRQRLHGDSGLSELGFDGYDAQLADLRLAHPDDATKQALLD 466
Query: 356 ALLMYGKSITQKI 368
L +G+ + + +
Sbjct: 467 QLAAWGQDLQRTL 479
>gi|421499303|ref|ZP_15946353.1| exodeoxyribonuclease I [Aeromonas media WS]
gi|407181658|gb|EKE55665.1| exodeoxyribonuclease I [Aeromonas media WS]
Length = 426
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 189/361 (52%), Gaps = 9/361 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSFKLE L+ N +
Sbjct: 69 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWALDDEGKPSFKLERLTVANGV 128
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF+++ +LR K V A I +P +++ M
Sbjct: 129 AHTNAHDALSDVLATIEMAKLVKKAQPKLFDYLFALRNKNKVKALIDVVTMKPLVHVSGM 188
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 189 FSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLVELTSEEIRERLYTKKEELGDLAG 248
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++H+N+ P V++ L+ + D K++ + ++F
Sbjct: 249 IPVKLVHINKCP-VLAPAATLTPERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQE 307
Query: 240 KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
++D + D +LY F D + ++R+ L F F + +L E++F YRA
Sbjct: 308 FAGSNDS--DPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRLPEMLFRYRA 365
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLM 359
RN+ TLS E KRW+ + S +++++ Y + LE + ++NE + IL +L
Sbjct: 366 RNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQSNERNFAILKSLYR 421
Query: 360 Y 360
Y
Sbjct: 422 Y 422
>gi|320540911|ref|ZP_08040415.1| putative exonuclease I, partial [Serratia symbiotica str. Tucson]
gi|320029026|gb|EFW11201.1| putative exonuclease I [Serratia symbiotica str. Tucson]
Length = 310
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 172/316 (54%), Gaps = 14/316 (4%)
Query: 10 YEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDA 69
Y W+N SRWDL++V++A Y L P GI WP +G PSF+LEHL+ N + H +AHDA
Sbjct: 1 YAYSWQNGNSRWDLLDVMRACYALRPDGIVWPENEDGFPSFRLEHLTRANGVEHTQAHDA 60
Query: 70 LSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYI 129
+SDV AT+ +A+ ++ PRLF+F+L R K + I P +++ MF +
Sbjct: 61 MSDVYATIAMAKQVKQAQPRLFDFLLQYRNKHKLNTLIDIAEVTPLVHVSGMFGAARGNT 120
Query: 130 SLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIH 186
S + P+ HP+NKN I +L D L + +++R+ L ++++ D IP+ ++H
Sbjct: 121 SWVAPLAWHPVNKNAAIMCDLAGDLTPLLTLNADQLRERLYTRRDALTVDQPPIPLKLVH 180
Query: 187 LNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK----IN 242
+N+ P++ +L N R D +N++ + + + +K+ +
Sbjct: 181 INKCPVLAPARTLLPENTE-RLGIDRRTCRQNLQL---LRQHPQVREKVVALFAEAEPYK 236
Query: 243 NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNF 302
SD ++D LY+ F S D + I++ P+ L ++ F + +++EL+F +RARN+
Sbjct: 237 GSD---DVDARLYDGFFSDADKAAMKIIQQTKPQDLPALDLAFSDSRMKELLFRFRARNY 293
Query: 303 IETLSYKELKRWKKYR 318
TL+ E +RW +YR
Sbjct: 294 PNTLNNAEQQRWLQYR 309
>gi|417820650|ref|ZP_12467264.1| exodeoxyribonuclease I [Vibrio cholerae HE39]
gi|423952412|ref|ZP_17734126.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|423982064|ref|ZP_17737909.1| exonuclease family protein [Vibrio cholerae HE-46]
gi|340038281|gb|EGQ99255.1| exodeoxyribonuclease I [Vibrio cholerae HE39]
gi|408660275|gb|EKL31296.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|408665064|gb|EKL35883.1| exonuclease family protein [Vibrio cholerae HE-46]
Length = 474
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|260901800|ref|ZP_05910195.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AQ4037]
gi|308108118|gb|EFO45658.1| exodeoxyribonuclease I [Vibrio parahaemolyticus AQ4037]
Length = 473
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 196/374 (52%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP +G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVKNGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++ + L K+ + +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSTEELHERLYTKREDLGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N N KC ++ I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAE-------NIGIDRQKCLDNLALLRQYPEIREKLIG 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIERQFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRARNF TL +E +RW + F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARNFPGTLDEQEQRRWALHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|424045521|ref|ZP_17783086.1| exodeoxyribonuclease I [Vibrio cholerae HENC-03]
gi|408886571|gb|EKM25245.1| exodeoxyribonuclease I [Vibrio cholerae HENC-03]
Length = 473
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 198/374 (52%), Gaps = 27/374 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFYSMRNKRKLNELVDIVNMTPLMHVSGMM 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L ++++ L K+ +
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELKERLYTKREELGGLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIF- 236
P+ ++HLN+ PI+ + + N KC S++ + I +K+
Sbjct: 295 PVKLVHLNKCPILAPAKTLTAENAEV-------IGIDRQKCLSNLALLRQHPEIREKLIS 347
Query: 237 ---LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
++ + SD ++D +LY+ F S D + I+R P L+ ++ F++K+++ L
Sbjct: 348 LFSIEREFEKSD---DVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPL 404
Query: 294 IFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDT 351
+F YRAR++ TL +E +RW ++ F ++ I + L +E+L+ +++E
Sbjct: 405 LFRYRARHYAGTLDEQEQRRWAQHCREVFESQ------IEEYMLNLENLVHEHESDEKKI 458
Query: 352 KILNALLMYGKSIT 365
IL ++ Y +S+
Sbjct: 459 AILKSVYRYVESLA 472
>gi|456736601|gb|EMF61327.1| Exodeoxyribonuclease I [Stenotrophomonas maltophilia EPM1]
Length = 479
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 189/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANHV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+++ L LR K++V + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWDYALKLRDKRFVGGLLDVAAMKPVLHISLR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L + L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYMRASELPEGVA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRAATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---ILN 355
ARN ++L+ E +RW+ YR R Y + L DT+ +L
Sbjct: 407 ARNHPDSLAPPERQRWQDYRRQRLLGDGGLGELNLPQYQQQLDALAAEAPDDTRRQALLQ 466
Query: 356 ALLMYGKSITQKI 368
+L +G+ + + +
Sbjct: 467 SLRDWGQHLQETL 479
>gi|262165491|ref|ZP_06033228.1| exodeoxyribonuclease I [Vibrio mimicus VM223]
gi|262025207|gb|EEY43875.1| exodeoxyribonuclease I [Vibrio mimicus VM223]
Length = 474
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ D ++ L + D
Sbjct: 235 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLFDLDAEALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVSVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L ++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLEIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +EH T
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLV---HEHQT 454
>gi|418516989|ref|ZP_13083158.1| exonuclease I [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|410706388|gb|EKQ64849.1| exonuclease I [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 481
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +++
Sbjct: 170 REGDAHEALSDVYATIGMARKFQRHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAVVNDADASLYDGFVAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLQDRGLGEVTLEQYHAQIADLRGAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|334704672|ref|ZP_08520538.1| exodeoxyribonuclease I [Aeromonas caviae Ae398]
Length = 475
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 184/370 (49%), Gaps = 27/370 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + + GKPSF+LE L+ N +
Sbjct: 118 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPQGIEWAFDDEGKPSFRLEKLTVANGV 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +ARL++ P+LF ++ LR K V A I +P +++ M
Sbjct: 178 AHANAHDALSDVLATIEMARLVKKAQPKLFEYLFDLRNKNKVKALIDVVTMKPLVHVSGM 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 238 FSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELSCEEIRERLYTKKEELGDLAG 297
Query: 180 IPISMIHLNRSPIVISNLKVLSS--------NLMFRYKFDLNCAFKNIKCA-SSILNNTY 230
IP+ ++H+N+ P++ + R DL A ++ + N +
Sbjct: 298 IPVKLVHINKCPVLAPAATLTPERADELGINRAQCRKSLDLLRAHPEVREKLVEVFNQEF 357
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
N+ D D +LY F D + ++R+ L F F + +L
Sbjct: 358 AGS--------NDGD----PDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDPRL 405
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD 350
E++F YRARN+ TLS E KRW+ + S +++++ Y + LE + + NE +
Sbjct: 406 PEMLFRYRARNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQGNERN 461
Query: 351 TKILNALLMY 360
IL +L Y
Sbjct: 462 FAILKSLYHY 471
>gi|424660338|ref|ZP_18097585.1| exodeoxyribonuclease I [Vibrio cholerae HE-16]
gi|408050821|gb|EKG85960.1| exodeoxyribonuclease I [Vibrio cholerae HE-16]
Length = 474
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFVDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ + D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLMDLDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDTEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|406676979|ref|ZP_11084164.1| hypothetical protein HMPREF1170_02372 [Aeromonas veronii AMC35]
gi|404625293|gb|EKB22110.1| hypothetical protein HMPREF1170_02372 [Aeromonas veronii AMC35]
Length = 471
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 187/370 (50%), Gaps = 27/370 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + + GKPSF+LE L+ N +
Sbjct: 114 LYRNFYDPYAYSWQNGNSRWDILDMLRACYALRPEGIEWAFDDEGKPSFRLEKLTVANGV 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF ++ LR K V A I +P +++ M
Sbjct: 174 AHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 234 FSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNL--------MFRYKFDLNCAFKNIKCA-SSILNNTY 230
IP+ ++H+N+ P++ + + R DL A ++ + N +
Sbjct: 294 IPVKLVHINKCPVLAPAATLTAERADELGINREQCRKSLDLLRAHPEVREKLVEVFNQEF 353
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
N+SD D +LY F D + ++R+ L F F + +L
Sbjct: 354 AGS--------NDSD----PDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRL 401
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD 350
E++F YRARN+ TLS E KRW+ + S +++++ Y + LE + ++NE +
Sbjct: 402 PEMLFRYRARNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQSNERN 457
Query: 351 TKILNALLMY 360
IL +L Y
Sbjct: 458 FAILKSLYHY 467
>gi|418519930|ref|ZP_13085981.1| exonuclease I [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410704590|gb|EKQ63072.1| exonuclease I [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 481
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +++
Sbjct: 170 REGDAHEALSDVYATIGMARKFQRHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAVVNDADASLYDGFVAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRGAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|423196380|ref|ZP_17182963.1| hypothetical protein HMPREF1171_00995 [Aeromonas hydrophila SSU]
gi|404632464|gb|EKB29079.1| hypothetical protein HMPREF1171_00995 [Aeromonas hydrophila SSU]
Length = 471
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 187/361 (51%), Gaps = 9/361 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSF+LE L+ N +
Sbjct: 114 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPQGIEWAFDEEGKPSFRLEKLTVANGV 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +ARL++ P+LF+++ LR K V A I +P +++ M
Sbjct: 174 AHANAHDALSDVLATIEMARLVKKAQPKLFDYLFDLRNKNKVKALIDVVTMKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 234 FSPWQGCASWVSPLAWHPSNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++H+N+ P V++ L++ + D K++ + ++F
Sbjct: 294 IPVKLVHINKCP-VLAPAATLTAERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQE 352
Query: 240 KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
++D D +LY F D + ++R+ L F F + +L E++F YRA
Sbjct: 353 FAGSNDGA--PDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDPRLPEMLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLM 359
RN+ TLS E KRW+ + S +++++ Y + LE + + N+ + IL +L
Sbjct: 411 RNWPHTLSETEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQGNDRNFAILKSLYH 466
Query: 360 Y 360
Y
Sbjct: 467 Y 467
>gi|163801030|ref|ZP_02194930.1| exodeoxyribonuclease I [Vibrio sp. AND4]
gi|159175379|gb|EDP60176.1| exodeoxyribonuclease I [Vibrio sp. AND4]
Length = 473
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 198/371 (53%), Gaps = 21/371 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P G+ WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGVEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + + P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRNKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +IT +L DP+ L K+++ L K+ + I
Sbjct: 235 GRECQYTSWIVPVAWHPTNNNAVITIDLAKDPQPLLELSAEKLQERLYTKREELGDLLPI 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF---- 236
P+ +IHLN+ PI ++ K L++ D N+ + + + I +K+
Sbjct: 295 PVKLIHLNKCPI-LAPAKTLTAENAEIIGIDRQKCLNNL---ALLRQHPEIREKLIGLFS 350
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
++ + SD ++D +LY F S D + I+R L+ ++ F++K+++ L+F
Sbjct: 351 IEREFQKSD---DVDTQLYEGFFSPADRAAMDIIRETDAHNLAALDIEFDDKRIKPLLFR 407
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI--L 354
YRAR++ TL +E +RW+++ F + I + L +E+L+ + + KI L
Sbjct: 408 YRARHYAGTLDEQEQRRWEQHCREVFEGQ------IEEYMLNLENLVHEHESDEKKIALL 461
Query: 355 NALLMYGKSIT 365
++ Y +S+
Sbjct: 462 KSVYRYVESLA 472
>gi|381171415|ref|ZP_09880561.1| exonuclease C-terminal family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688185|emb|CCG37048.1| exonuclease C-terminal family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 481
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +++
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAVVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRGAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|390989991|ref|ZP_10260283.1| exonuclease C-terminal family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555241|emb|CCF67258.1| exonuclease C-terminal family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 481
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 196/375 (52%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +++
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHVSQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L + I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFE-RLGVDHDAVVA--KAARLRALGPELAEKVRQV 346
Query: 239 YKINN--SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + + D LY+ F+++ D LA +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAAAAVVNDADASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS++E +RW YR R + + ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRGAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|423199941|ref|ZP_17186521.1| hypothetical protein HMPREF1167_00104 [Aeromonas veronii AER39]
gi|404621166|gb|EKB18056.1| hypothetical protein HMPREF1167_00104 [Aeromonas veronii AER39]
Length = 475
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 27/370 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + + GKPSF+LE L+ N +
Sbjct: 118 LYRNFYDPYAYSWQNGNSRWDILDMLRACYALRPEGIEWAFDDEGKPSFRLEKLTVANGV 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF ++ LR K V A I +P +++ M
Sbjct: 178 AHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGM 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 238 FSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 297
Query: 180 IPISMIHLNRSPIVISNLKVLSSNL--------MFRYKFDLNCAFKNIKCA-SSILNNTY 230
IP+ ++H+N+ P++ + + R DL A ++ + N +
Sbjct: 298 IPVKLVHINKCPVLAPAATLTAERADELGINREQCRKSLDLLRAHPEVREKLVEVFNQEF 357
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
N SD D +LY F D + ++R+ L F F + +L
Sbjct: 358 AGS--------NESD----PDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDARL 405
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD 350
E++F YRARN+ TLS E KRW+ + S +++++ Y + LE + ++NE +
Sbjct: 406 PEMLFRYRARNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQSNERN 461
Query: 351 TKILNALLMY 360
IL +L Y
Sbjct: 462 FAILKSLYHY 471
>gi|258624410|ref|ZP_05719357.1| exodeoxyribonuclease I [Vibrio mimicus VM603]
gi|258583257|gb|EEW08059.1| exodeoxyribonuclease I [Vibrio mimicus VM603]
Length = 474
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGIEWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AH+A++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHNAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ D ++ L + D
Sbjct: 235 GRERQYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLFDLDAEALQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAEKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY F S D + I+R+ SP L +++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYEGFFSPADRAAMEIIRTTSPDNLGSLDIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +EH T
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLV---HEHQT 454
>gi|260778470|ref|ZP_05887362.1| exodeoxyribonuclease I [Vibrio coralliilyticus ATCC BAA-450]
gi|260604634|gb|EEX30929.1| exodeoxyribonuclease I [Vibrio coralliilyticus ATCC BAA-450]
Length = 474
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENEEGFISFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ ++ P+LF++ LS+R K+ + + P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKVKAAQPKLFDYFLSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP N+N +I +L DP+ L D+ ++ + L K + D
Sbjct: 235 GRECNYTSWVVPVAWHPTNQNAVIVVDLAKDPQPLLDLDVEQLNERLYTKHSELGPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++HLN+ PI ++ K L++ D +N++ + + I +K+ Y
Sbjct: 295 VPIKLVHLNKCPI-LAPAKTLTAENAANIGIDREKCLQNLE---RLRQHPEIREKLNSLY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + ++D LY+ F S + I+R PK LS ++ F + ++ L+F YR
Sbjct: 351 SIEREYEKSDDVDTMLYDGFFSPAAKQSMDIIRETEPKNLSALDISFSDDRIAPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR+F TL E ++W + F ++ I + L +E+L+ +++E IL +
Sbjct: 411 ARHFPWTLDESEQQKWAAHSREYFESR------IEDYMLNLENLVHEHESDEKKIAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYQY 468
>gi|411009577|ref|ZP_11385906.1| exodeoxyribonuclease I [Aeromonas aquariorum AAK1]
Length = 475
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 169/318 (53%), Gaps = 9/318 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSFKLE L+ N +
Sbjct: 118 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWAFDEEGKPSFKLEKLTVANGV 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF+++ LR K V A I +P +++ M
Sbjct: 178 AHANAHDALSDVLATIEMAKLVKKAQPKLFDYLFDLRNKNKVKALIDVVTMKPLVHVSGM 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 238 FSPWQGCASWVSPLAWHPSNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 297
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKC--ASSILNNTYIWKKIFL 237
IP+ ++H+N+ P V++ L+ + D K++ A S + + ++F
Sbjct: 298 IPVKLVHINKCP-VLAPAATLTPERADQLGIDRAQCRKSLDLLRAHSEVREKLV--EVFN 354
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
N+D + D +LY F D + ++R+ L F F + +L E++F Y
Sbjct: 355 QEFAGNND--GDPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDPRLPEMLFRY 412
Query: 298 RARNFIETLSYKELKRWK 315
RARN+ TLS E KRW+
Sbjct: 413 RARNWPHTLSEAEQKRWR 430
>gi|425063299|ref|ZP_18466424.1| Exodeoxyribonuclease I [Pasteurella multocida subsp. gallicida X73]
gi|404382862|gb|EJZ79319.1| Exodeoxyribonuclease I [Pasteurella multocida subsp. gallicida X73]
Length = 481
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 174/324 (53%), Gaps = 13/324 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 120 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 179
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 180 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 239
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 240 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 299
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + SI + +
Sbjct: 300 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPSIRDKV---TE 355
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
IF + + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+
Sbjct: 356 IFNEER--HFAPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKLL 413
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRAR++ +L+ E +W+KYR
Sbjct: 414 FHYRARHYFNSLTRAEQIQWQKYR 437
>gi|119946086|ref|YP_943766.1| exodeoxyribonuclease I [Psychromonas ingrahamii 37]
gi|119864690|gb|ABM04167.1| Exodeoxyribonuclease I subunit C [Psychromonas ingrahamii 37]
Length = 486
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 176/322 (54%), Gaps = 9/322 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY+REWKN CSRWD+I++++A Y L P GI WP N PSF+LE L+ N L
Sbjct: 124 LYRNFRDPYQREWKNGCSRWDIIDLVRACYALRPEGINWPVDENDAPSFRLELLTKENGL 183
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H++AHDA+SDV AT+ +A+LI+ +P+L+++ LRKK V+A++ P +++ M
Sbjct: 184 AHQQAHDAMSDVYATIAMAKLIKETHPKLYDYFFGLRKKNNVMAQLKLGSNTPVVHVSGM 243
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
F + S + PI HP NKN +I +L D I +I+ YL E I
Sbjct: 244 FPALQGCASYVMPITQHPSNKNAVIVVDLNKDLSGLATLSIEQIQTYLYTPSIDLPEGIE 303
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I +IH+N+ PI I+ K L+ + D +++ S+ +K+F+
Sbjct: 304 RPAIKLIHINKCPI-IAPAKTLTEERADQLGIDRKQCRRSLDFLSNQPELAEKLQKVFIQ 362
Query: 239 YKINNSDLELNIDEELY-NNFISKKDN-LKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ + +++E LY F+S D L + S P L N F FE+ +L L++
Sbjct: 363 ETPSTEN--KSVEEMLYSGGFLSAADKALSEEVCNSTWP-ALGNKEFNFEDDRLGILLWH 419
Query: 297 YRARNFIETLSYKELKRWKKYR 318
YRARN ++L E ++W ++R
Sbjct: 420 YRARNAPDSLDVAEQEKWARHR 441
>gi|417853230|ref|ZP_12498645.1| exonuclease I [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338215327|gb|EGP01619.1| exonuclease I [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 475
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 196/372 (52%), Gaps = 21/372 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N++
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANDI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R +L K E
Sbjct: 234 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQHLYTPKAELIEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + SI + +
Sbjct: 294 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPSIRDKV---TE 349
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
IF + + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+
Sbjct: 350 IFNEER--HFAPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT--K 352
F YRAR+ +L+ E +W+KYR +KK + + F ++ L+ + +E+ T
Sbjct: 408 FHYRARHCFNSLTRAEQIQWQKYR-----HKKLDQVAL-QFEQSLQRLIAENSENPTNLT 461
Query: 353 ILNALLMYGKSI 364
+L + YG I
Sbjct: 462 LLQKVYEYGAKI 473
>gi|386719114|ref|YP_006185440.1| Exodeoxyribonuclease I [Stenotrophomonas maltophilia D457]
gi|384078676|emb|CCH13269.1| Exodeoxyribonuclease I [Stenotrophomonas maltophilia D457]
Length = 479
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 171/323 (52%), Gaps = 6/323 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+ + L LR K++V + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWEYALKLRDKRFVGGLLDVAAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L + L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLEGEIDDLLELPAEVIAQRLYLRASELPEGVA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRVATVADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISR 321
ARN ++L+ E +RW+ YR R
Sbjct: 407 ARNHPDSLAPAERQRWQDYRRQR 429
>gi|260772965|ref|ZP_05881881.1| exodeoxyribonuclease I [Vibrio metschnikovii CIP 69.14]
gi|260612104|gb|EEX37307.1| exodeoxyribonuclease I [Vibrio metschnikovii CIP 69.14]
Length = 480
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 199/376 (52%), Gaps = 30/376 (7%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+ SRWDL++V++A + L P GI WP G SFKLEHLS N +
Sbjct: 121 YRNFIDPYAWSWQQGNSRWDLLDVMRACHALRPEGIEWPENQEGFTSFKLEHLSKANGIE 180
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ LS+R K+ ++ + P +++ M
Sbjct: 181 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFLSMRHKRKLIDLVDIVNMTPLMHVSGML 240
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ SY S + PI HP N+N +I +L +P+ ++ L K + E
Sbjct: 241 GRERSYTSWVVPIAWHPTNQNAVIVVDLAKNPEPLFELTSEQLLQRLYTKHDDLAEGELP 300
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
P+ +IHLN+ PI ++ K L++ N A I + + + I ++ L
Sbjct: 301 APVKLIHLNKCPI-LAPAKTLTAE---------NAATIGINREQCLAHLSQIRQQPTLRE 350
Query: 240 KI-------NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
K+ + ++D +LY+ F S D + I+RS +P+ L++++ F ++++
Sbjct: 351 KLVDVFSAERDFSASSDVDSQLYDGFFSPSDRAAMDIIRSAAPESLADLDIQFSDQRIAP 410
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK 352
L+F YRAR++ TL+ E +RW + F + + + L +E+L+++ ++HD K
Sbjct: 411 LLFRYRARHYPWTLNETEQRRWASHCQDYFATQ------LPSYMLNLENLVEQ-HQHDAK 463
Query: 353 ---ILNALLMYGKSIT 365
IL A+ Y +++
Sbjct: 464 KIAILKAVYHYVEALA 479
>gi|153212250|ref|ZP_01948038.1| exodeoxyribonuclease I [Vibrio cholerae 1587]
gi|422910024|ref|ZP_16944666.1| exodeoxyribonuclease I [Vibrio cholerae HE-09]
gi|124116628|gb|EAY35448.1| exodeoxyribonuclease I [Vibrio cholerae 1587]
gi|341633936|gb|EGS58712.1| exodeoxyribonuclease I [Vibrio cholerae HE-09]
Length = 474
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 194/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L + ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELNAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|419825728|ref|ZP_14349232.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|408609809|gb|EKK83185.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
Length = 474
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 193/364 (53%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ E ++D +LY F D + I+R+ +P+ L ++ +K++E L+F YR
Sbjct: 351 SQEREFNQESDVDSQLYAGFSPPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDTEQRRWAAH--CRDYFER----NLEGYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|425065398|ref|ZP_18468518.1| Exodeoxyribonuclease I [Pasteurella multocida subsp. gallicida
P1059]
gi|404383774|gb|EJZ80219.1| Exodeoxyribonuclease I [Pasteurella multocida subsp. gallicida
P1059]
Length = 481
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 120 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 179
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 180 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 239
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 240 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 299
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D +N++ L+ +IF
Sbjct: 300 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSLSIRDKVTEIFN 358
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+F Y
Sbjct: 359 EER--HFTPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKLLFHY 416
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR++ +L+ E +W+KYR
Sbjct: 417 RARHYFNSLTRAEQIQWQKYR 437
>gi|335044458|ref|ZP_08537483.1| exonuclease I [Methylophaga aminisulfidivorans MP]
gi|333787704|gb|EGL53588.1| exonuclease I [Methylophaga aminisulfidivorans MP]
Length = 482
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 192/373 (51%), Gaps = 10/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN + Y REW+N SRWD+I++++ L P GI WP ++GKPSF+LEHL+ NN+
Sbjct: 109 LFRNFYDAYAREWQNGNSRWDIIDMVRLTRALRPKGINWPDHDDGKPSFRLEHLTAANNI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AHDAL DV AT+ +A+LI+N P+LF+++ R+K ++ + P +++ M
Sbjct: 169 EQIGAHDALVDVYATIEIAKLIKNAQPKLFDYVYQNRRKNHIAPLLNIHDRTPVIHVSRM 228
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI- 180
+ S++ +L+ P+ P N N +I ++ +DP + D ++ L E I
Sbjct: 229 YPSEYCGTALVVPLAKDPTNPNGVIVYDCRYDPIDLIELDAETLQQRLFTPSADLAEGIQ 288
Query: 181 --PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+ IH+N+ P+V+ L+ + R D +++ ++ + + +IF
Sbjct: 289 RPALKTIHINKCPVVVP-AATLNDDAAKRLDIDRAQHQRHLDMLNAAGDLSEKLSQIFTP 347
Query: 239 YKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
D + D LY F S D K+ ++RS P L ++ FE+ +L E++F Y
Sbjct: 348 KPF---DPVADPDASLYSGGFFSDNDKRKMELIRSAEPDMLKTLSIPFEDSRLAEMLFRY 404
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNK-KNNLYNINMFYLEI-ESLLKKANEHDTKILN 355
RARN+ +L+ E +W +YR R ++ + + N + FY + E+ + E K+L
Sbjct: 405 RARNWPGSLTEDEQDQWLQYRQQRLADETPDAILNFSRFYSALAEAKQQDLPEQKQKVLA 464
Query: 356 ALLMYGKSITQKI 368
L Y + ++
Sbjct: 465 DLTHYASQLAAEL 477
>gi|421263345|ref|ZP_15714398.1| exonuclease I [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401689675|gb|EJS85065.1| exonuclease I [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 475
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 174/324 (53%), Gaps = 13/324 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 234 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + SI + +
Sbjct: 294 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPSIRDKV---TE 349
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
IF + + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+
Sbjct: 350 IFNEER--HFAPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYR 318
F YRAR++ +L+ E +W+KYR
Sbjct: 408 FHYRARHYFNSLTRAEQIQWQKYR 431
>gi|378774319|ref|YP_005176562.1| exodeoxyribonuclease I [Pasteurella multocida 36950]
gi|356596867|gb|AET15593.1| exodeoxyribonuclease I [Pasteurella multocida 36950]
Length = 475
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 234 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D +N++ L+ +IF
Sbjct: 294 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSLSIRDKVTEIFN 352
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+F Y
Sbjct: 353 EER--HFTPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKLLFHY 410
Query: 298 RARNFIETLSYKELKRWKKYR 318
RAR++ +L+ E +W+KYR
Sbjct: 411 RARHYFNSLTRAEQIQWQKYR 431
>gi|229529683|ref|ZP_04419073.1| exodeoxyribonuclease I [Vibrio cholerae 12129(1)]
gi|229333457|gb|EEN98943.1| exodeoxyribonuclease I [Vibrio cholerae 12129(1)]
Length = 478
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 183/339 (53%), Gaps = 15/339 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEH+S N +
Sbjct: 119 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHISVANGIE 178
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 179 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 238
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 239 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 298
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---IF 236
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K +F
Sbjct: 299 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 354
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N D ++D +LY F S D + I+R+ +P+ L ++ +K++E L+F
Sbjct: 355 SQEREFNQD--SDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIQVADKRIEPLLFR 412
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINM 334
YRAR++ TL+ E +RW + R Y ++N Y +N+
Sbjct: 413 YRARHYPHTLTDAEQRRWAAH--CRDYFERNLEGYMVNL 449
>gi|289663122|ref|ZP_06484703.1| exonuclease I [Xanthomonas campestris pv. vasculorum NCPPB 702]
Length = 481
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 13/376 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLANANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLSRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFQ-RLGVDHEAVLA--KAARLRELGPALAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D L +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAPAAATNDADASLYDGFLAEGDKHLLTQVRTSAPAELGALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDT---K 352
YRARN+ +TLS++E +RW YR R + + ++ +I L+ A+ D
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVTLEQYHAQIAD-LRLAHPDDANKQA 465
Query: 353 ILNALLMYGKSITQKI 368
+L+ L +G + + +
Sbjct: 466 LLDQLAAWGSDLQRTL 481
>gi|71275767|ref|ZP_00652051.1| Exodeoxyribonuclease I [Xylella fastidiosa Dixon]
gi|170730127|ref|YP_001775560.1| exonuclease I [Xylella fastidiosa M12]
gi|71163345|gb|EAO13063.1| Exodeoxyribonuclease I [Xylella fastidiosa Dixon]
gi|71728093|gb|EAO30295.1| Exodeoxyribonuclease I [Xylella fastidiosa Ann-1]
gi|167964920|gb|ACA11930.1| Exodeoxyribonuclease I [Xylella fastidiosa M12]
Length = 488
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 14/375 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + L P GI WP + +G PSFKLEHL+ N+
Sbjct: 120 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGAPSFKLEHLALANHA 179
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 180 REGTAHEALSDVYATISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQR 239
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFKE 178
+ + + + P+ HP N +I ++L D L I D+L ++
Sbjct: 240 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDLPEGEQ 299
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + LN A K A + +K+
Sbjct: 300 RIPLKEVHLNKVPALIAWNHLRASDFT---RLGLNPAMLETKAAQLRACGPDLAEKVRHV 356
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D L LR+ L+ + +L EL+F
Sbjct: 357 FSHTYNTAN---DADASLYDGFLTEEDRRLLPQLRASPADTLATFEQRLRDPRLIELLFR 413
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + + ++ +I L ++ TK +
Sbjct: 414 YRARNFPETLSCDEQTRWDTYRRRRLTTDTGLSELTFDQYHAQIAELRITHSQDATKQTL 473
Query: 354 LNALLMYGKSITQKI 368
L+ L +G +++ +
Sbjct: 474 LDQLAAWGSELSRTL 488
>gi|330829787|ref|YP_004392739.1| exodeoxyribonuclease I [Aeromonas veronii B565]
gi|423209515|ref|ZP_17196069.1| hypothetical protein HMPREF1169_01587 [Aeromonas veronii AER397]
gi|328804923|gb|AEB50122.1| Exodeoxyribonuclease I [Aeromonas veronii B565]
gi|404617373|gb|EKB14309.1| hypothetical protein HMPREF1169_01587 [Aeromonas veronii AER397]
Length = 471
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 27/370 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + + GKPSF+LE L+ N +
Sbjct: 114 LYRNFYDPYAYSWQNGNSRWDILDMLRACYALRPEGIEWAFDDEGKPSFRLEKLTVGNGV 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDALSDV AT+ +A+L++ P+LF ++ LR K V A I +P +++ M
Sbjct: 174 AHANAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS S + P+ HP N+N +I +L DP + +IR+ L KK +
Sbjct: 234 FSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAG 293
Query: 180 IPISMIHLNRSPIVISNLKVLSSNL--------MFRYKFDLNCAFKNIKCA-SSILNNTY 230
IP+ ++H+N+ P++ + + R DL A ++ + N +
Sbjct: 294 IPVKLVHINKCPVLAPAATLTAERADELGINREQCRKSLDLLRAHPEVREKLVEVFNQEF 353
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
N SD D +LY F D + ++R+ L F F + +L
Sbjct: 354 AGS--------NESD----PDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRL 401
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD 350
E++F YRARN+ TLS E KRW+ + S +++++ Y + LE + ++NE +
Sbjct: 402 PEMLFRYRARNWPHTLSEAEQKRWRLH-CSDYFSRRLPDY---VPRLEALAEQNQSNERN 457
Query: 351 TKILNALLMY 360
IL +L Y
Sbjct: 458 FAILKSLYHY 467
>gi|28056789|gb|AAO28661.1| exodeoxyribonuclease I [Xylella fastidiosa Temecula1]
Length = 494
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 190/375 (50%), Gaps = 14/375 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + + P GI WP + +G PSFKLEHL+ N+
Sbjct: 126 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHAVRPEGIHWPTREDGAPSFKLEHLALANHA 185
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 186 REGTAHEALSDVYATISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQR 245
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFKE 178
+ + + + P+ HP N +I ++L D L I D+L ++
Sbjct: 246 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDLPEGEQ 305
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + ++ + K A + +K+
Sbjct: 306 RIPLKEVHLNKVPALIAWNHLRASDFT---RLGMDPSMLETKAAQLRACGPDLAEKVRNV 362
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D L LR+ SP L + +L EL+F
Sbjct: 363 FSHTYNTAN---DADASLYDGFLTEEDRRLLPQLRASSPDTLVTFEQRLRDPRLIELLFR 419
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + + ++ +I L ++ TK +
Sbjct: 420 YRARNFPETLSCDEQTRWDTYRRRRLTTDTGLSELTFDQYHAQIAELRITHSQDATKQTL 479
Query: 354 LNALLMYGKSITQKI 368
L+ L +G +++ +
Sbjct: 480 LDQLAAWGSELSRTL 494
>gi|161484692|ref|NP_779012.2| exonuclease I [Xylella fastidiosa Temecula1]
gi|182681388|ref|YP_001829548.1| exonuclease I [Xylella fastidiosa M23]
gi|386084886|ref|YP_006001168.1| exonuclease I [Xylella fastidiosa subsp. fastidiosa GB514]
gi|417559470|ref|ZP_12210381.1| Exonuclease I SbcB [Xylella fastidiosa EB92.1]
gi|182631498|gb|ACB92274.1| Exodeoxyribonuclease I [Xylella fastidiosa M23]
gi|307579833|gb|ADN63802.1| exonuclease I [Xylella fastidiosa subsp. fastidiosa GB514]
gi|338177946|gb|EGO80980.1| Exonuclease I SbcB [Xylella fastidiosa EB92.1]
Length = 478
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 190/375 (50%), Gaps = 14/375 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + + P GI WP + +G PSFKLEHL+ N+
Sbjct: 110 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHAVRPEGIHWPTREDGAPSFKLEHLALANHA 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 170 REGTAHEALSDVYATISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFKE 178
+ + + + P+ HP N +I ++L D L I D+L ++
Sbjct: 230 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDLPEGEQ 289
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + ++ + K A + +K+
Sbjct: 290 RIPLKEVHLNKVPALIAWNHLRASDFT---RLGMDPSMLETKAAQLRACGPDLAEKVRNV 346
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D L LR+ SP L + +L EL+F
Sbjct: 347 FSHTYNTAN---DADASLYDGFLTEEDRRLLPQLRASSPDTLVTFEQRLRDPRLIELLFR 403
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + + ++ +I L ++ TK +
Sbjct: 404 YRARNFPETLSCDEQTRWDTYRRRRLTTDTGLSELTFDQYHAQIAELRITHSQDATKQTL 463
Query: 354 LNALLMYGKSITQKI 368
L+ L +G +++ +
Sbjct: 464 LDQLAAWGSELSRTL 478
>gi|27366077|ref|NP_761605.1| exonuclease I [Vibrio vulnificus CMCP6]
gi|27362277|gb|AAO11132.1| Exodeoxyribonuclease I [Vibrio vulnificus CMCP6]
Length = 473
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 191/367 (52%), Gaps = 15/367 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W+N SRWDL++V++A + L P G+ WP G SFKLEHLS N +
Sbjct: 115 YRNFLDPYSWSWQNGNSRWDLLDVMRACHALRPEGVEWPENEEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +I +L DP+ D + + + L + + + +
Sbjct: 235 GRECQYTSWIVPLAWHPTNNNAVIVVDLAKDPQPLFDLDADALHERLYTRHDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ I + + +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAANIGIDREQCLANLAL---IRQHPEVREKLVQLFS 350
Query: 241 INNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
I + ++D LY+ F S D + I+R P L+ ++ F +K++E L+F YRA
Sbjct: 351 IEREFEKSHDVDTMLYDGFFSPADKASMDIIRQTDPTHLAALDITFNDKRIEPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNAL 357
RN+ TL E +RW + F ++ I + L +E+L+ +++E IL ++
Sbjct: 411 RNYPWTLDENEQRRWANHCREYFESR------IEEYMLNLENLVHEHESDEKKMAILKSV 464
Query: 358 LMYGKSI 364
Y +S+
Sbjct: 465 YRYTESL 471
>gi|37679656|ref|NP_934265.1| exonuclease I [Vibrio vulnificus YJ016]
gi|37198401|dbj|BAC94236.1| exonuclease I [Vibrio vulnificus YJ016]
Length = 473
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 191/367 (52%), Gaps = 15/367 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W+N SRWDL++V++A + L P G+ WP G SFKLEHLS N +
Sbjct: 115 YRNFLDPYSWSWQNGNSRWDLLDVMRACHALRPEGVEWPENEEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +I +L DP+ D + + + L + + + +
Sbjct: 235 GRECQYTSWIVPLAWHPTNNNAVIVVDLAKDPQPLFDLDADALHERLYTRHDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ I + + +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAANIGIDREQCLANLAL---IRQHPEVREKLVQLFS 350
Query: 241 INNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
I + ++D LY+ F S D + I+R P L+ ++ F +K++E L+F YRA
Sbjct: 351 IEREFEKSHDVDTLLYDGFFSPADKASMDIIRQTDPTHLAALDITFNDKRIEPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNAL 357
RN+ TL E +RW + F ++ I + L +E+L+ +++E IL ++
Sbjct: 411 RNYPWTLDENEQRRWANHCREYFESR------IEEYMLNLENLVHEHESDEKKMAILKSV 464
Query: 358 LMYGKSI 364
Y +S+
Sbjct: 465 YRYTESL 471
>gi|386834266|ref|YP_006239581.1| exodeoxyribonuclease I [Pasteurella multocida subsp. multocida str.
3480]
gi|385200967|gb|AFI45822.1| exodeoxyribonuclease I [Pasteurella multocida subsp. multocida str.
3480]
Length = 481
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 174/325 (53%), Gaps = 15/325 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 120 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 179
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 180 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 239
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 240 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 299
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + SI + +
Sbjct: 300 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPSIRDKV---TE 355
Query: 235 IF-LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
IF ++ S +N++ ELYN F D +AILR + +KL+ F++ ++ +L
Sbjct: 356 IFNEEWHFAPS---INVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKL 412
Query: 294 IFLYRARNFIETLSYKELKRWKKYR 318
+F YRAR++ +L+ E +W+KYR
Sbjct: 413 LFHYRARHYFNSLTRAEQIQWQKYR 437
>gi|383310254|ref|YP_005363064.1| exonuclease I [Pasteurella multocida subsp. multocida str. HN06]
gi|380871526|gb|AFF23893.1| exonuclease I [Pasteurella multocida subsp. multocida str. HN06]
Length = 475
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 174/325 (53%), Gaps = 15/325 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 234 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + SI + +
Sbjct: 294 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPSIRDKV---TE 349
Query: 235 IF-LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEEL 293
IF ++ S +N++ ELYN F D +AILR + +KL+ F++ ++ +L
Sbjct: 350 IFNEEWHFAPS---INVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDARIPKL 406
Query: 294 IFLYRARNFIETLSYKELKRWKKYR 318
+F YRAR++ +L+ E +W+KYR
Sbjct: 407 LFHYRARHYFNSLTRAEQIQWQKYR 431
>gi|325918073|ref|ZP_08180231.1| Exodeoxyribonuclease I subunit C [Xanthomonas vesicatoria ATCC
35937]
gi|325535696|gb|EGD07534.1| Exodeoxyribonuclease I subunit C [Xanthomonas vesicatoria ATCC
35937]
Length = 481
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 194/375 (51%), Gaps = 11/375 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GITWP + +G SFKLEHL+ N +
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRLVHALRPEGITWPQREDGATSFKLEHLADANAV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMEPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ L ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLDGDPEVLLRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + + R D + K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWHHLREPDFQ-RLGLDRDAVL--AKAARLRELGPALAEKVRQV 346
Query: 239 Y--KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + + D LY+ F+++ D LA +R+ +P++L + + +L EL+F
Sbjct: 347 YGNERAAAAAVNDADASLYDGFLAEGDKRLLAQVRASAPEELGALETRLRDPRLVELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARN+ +TLS+ E +RW +YR R ++ ++ +I L + TK +
Sbjct: 407 YRARNWPQTLSFDEQERWNQYRRKRLLEDHGLGEVTLDQYHAQIADLRLAHPDDATKQAL 466
Query: 354 LNALLMYGKSITQKI 368
L+ L +G + + +
Sbjct: 467 LDQLAAWGSDLQRTL 481
>gi|320156592|ref|YP_004188971.1| exodeoxyribonuclease I [Vibrio vulnificus MO6-24/O]
gi|319931904|gb|ADV86768.1| exodeoxyribonuclease I [Vibrio vulnificus MO6-24/O]
Length = 473
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 191/367 (52%), Gaps = 15/367 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN ++PY W+N SRWDL++V++A + L P G+ WP G SFKLEHLS N +
Sbjct: 115 YRNFLDPYSWSWQNGNSRWDLLDVMRACHALRPEGVEWPENEEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ +A+ ++ P+LF++ S+R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DI 180
+ Y S + P+ HP N N +I +L DP+ D + + + L + + + +
Sbjct: 235 GRECQYTSWIVPLAWHPTNNNAVIVVDLAKDPQPLFDLDADALHERLYTRHDELGDLLPV 294
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK 240
P+ ++HLN+ PI ++ K L++ D N+ I + + +K+ +
Sbjct: 295 PVKLVHLNKCPI-LAPAKTLTAENAANIGIDREQCLANLAL---IRQHPEVREKLVQLFS 350
Query: 241 INNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRA 299
I + ++D LY+ F S D + I+R P L+ ++ F +K++E L+F YRA
Sbjct: 351 IEREFEKSHDVDTLLYDGFFSPADKASMDIIRQTDPTHLAALDITFNDKRIEPLLFRYRA 410
Query: 300 RNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNAL 357
RN+ TL E +RW + F ++ I + L +E+L+ +++E IL ++
Sbjct: 411 RNYPWTLDENEQRRWANHCREYFESR------IEEYMLNLENLVHEHESDEKKMAILKSV 464
Query: 358 LMYGKSI 364
Y +S+
Sbjct: 465 YRYTESL 471
>gi|261211043|ref|ZP_05925333.1| exodeoxyribonuclease I [Vibrio sp. RC341]
gi|260840018|gb|EEX66618.1| exodeoxyribonuclease I [Vibrio sp. RC341]
Length = 474
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 191/364 (52%), Gaps = 16/364 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++VI+A + L P G+ WP +G SFKLE LS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVIRACHALRPEGMKWPENEDGFTSFKLERLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ I+ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKIKAAQPKLFDYFFNMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAEALQARLYTHYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 IPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPQIREKLVSVF 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
E N+D +LY+ F S D + I+R+ P+ L N++ +K++E L+F YR
Sbjct: 351 SQEREFAKENNVDSQLYDGFFSPADRAAMDIIRTTEPENLGNLDIKVADKRIEPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKILNA 356
AR++ TL+ E +RW + R Y ++ N+ + L +E+L+ +A+ IL +
Sbjct: 411 ARHYPHTLTDAEQRRWAAH--CRDYFER----NLESYMLNLENLVHEHQADPKKMAILKS 464
Query: 357 LLMY 360
+ Y
Sbjct: 465 VYHY 468
>gi|289669559|ref|ZP_06490634.1| exonuclease I [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 481
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 13/376 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL++V++ + L P GI WP + +G SFKLEHL+ N++
Sbjct: 110 LFRNFYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLANANDV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR + + P+L+++ L LR K++ + +P +I+
Sbjct: 170 REGDAHEALSDVYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + +I ++L DP+ ++I D L + E
Sbjct: 230 YPASRLCAAAVLPLTRHPRIDSRVIVFDLEGDPEVLSRLSPDEIADRLYIRAADLPEGEQ 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
IP+ +HLN+SP +++ + +++ R D K A + +K+
Sbjct: 290 RIPLKEVHLNKSPALVAWQHLRAADFQ-RLGVDHEAVLA--KAARLRELGPALAEKVRQV 346
Query: 239 YKINNSDLEL--NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + + D LY+ F+++ D L +R+ +P +L + F + +L EL+F
Sbjct: 347 YGSERAPAAATNDADASLYDGFLAEGDKHLLTQVRTSAPAELGALESRFRDPRLIELLFR 406
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDT---K 352
YRARN+ +TLS++E +RW YR R + + ++ +I L+ A+ D
Sbjct: 407 YRARNWPQTLSFEEQERWNVYRRQRLLEDRGLGEVILEQYHAQIAD-LRLAHPDDANKQA 465
Query: 353 ILNALLMYGKSITQKI 368
+L+ L +G + + +
Sbjct: 466 LLDQLAAWGSDLQRTL 481
>gi|145299357|ref|YP_001142198.1| exodeoxyribonuclease I [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357275|ref|ZP_12959975.1| exodeoxyribonuclease I [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142852129|gb|ABO90450.1| exodeoxyribonuclease I [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356689533|gb|EHI54071.1| exodeoxyribonuclease I [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 475
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 190/365 (52%), Gaps = 17/365 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PY W+N SRWD++++++A Y L P GI W + GKPSF+LE L+ N +
Sbjct: 118 LYRNFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWAFDEEGKPSFRLEKLTVANGV 177
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH AHDALSDV AT+ +A+L++ P+LF ++ +LR K V A I +P +++ M
Sbjct: 178 SHANAHDALSDVLATIEMAKLVKKAQPKLFEYLFTLRNKNKVKALIDVVTMKPLVHVSGM 237
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--D 179
FS +S + P+ HP N+N +I +L DP + +IR+ L +K+ +
Sbjct: 238 FSPWQGCVSWISPLAWHPTNQNAVIMVDLTRDPTPLIELSSEEIRERLYTRKDELGDLAA 297
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
IP+ ++H+N+ V++ L+ D K++ + + + +K+
Sbjct: 298 IPVKLVHINKC-RVLAPAATLTPERADELTIDREQCRKSLNL---LRAHPEVREKLV--- 350
Query: 240 KINNSDLE----LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
++ N + E + D +LY F D + ++R+ L F F + +L E++F
Sbjct: 351 EVFNQEFEGSNDPDPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDARLPEMLF 410
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
YRARN+ TLS E KRW+ + S +++++ Y LE + + NE + IL
Sbjct: 411 RYRARNWPHTLSEAEQKRWRLH-CSDYFSRRLPDYAPR---LEALAEQNQGNERNFAILK 466
Query: 356 ALLMY 360
+L Y
Sbjct: 467 SLYRY 471
>gi|15602476|ref|NP_245548.1| exonuclease I [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720883|gb|AAK02695.1| SbcB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 475
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 194/372 (52%), Gaps = 21/372 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA++DV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 EHSNAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L + L D N++R L K E
Sbjct: 234 LGNHRGNTTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGI 293
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKN---IKCASSILNNTYIWKK 234
+P+ ++H+N+ PI+ +L N R D +N +K + I + +
Sbjct: 294 LPVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRTFCLENLQRLKLSPPIRDKV---TE 349
Query: 235 IFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
IF + + + +N++ ELYN F D +AILR + +KL+ F++ ++ +L+
Sbjct: 350 IFNEER--HFAPSINVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDTRIPKLL 407
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT--K 352
F YRAR++ +L+ E +W+KYR +KK + + F ++ L+ + +E+ T
Sbjct: 408 FHYRARHYFNSLTRAEQIQWQKYR-----HKKLDQVAL-QFEQSLQRLIAENSENPTNLA 461
Query: 353 ILNALLMYGKSI 364
+L + YG I
Sbjct: 462 LLQKVYEYGAKI 473
>gi|336123958|ref|YP_004566006.1| exodeoxyribonuclease I [Vibrio anguillarum 775]
gi|335341681|gb|AEH32964.1| Exodeoxyribonuclease I [Vibrio anguillarum 775]
Length = 474
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 197/372 (52%), Gaps = 22/372 (5%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP + G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENDEGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HANAHDAMADVIATIELAKKVKAAQPKLFDYFFNMRHKRKLNDLIDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L +P+ + ++ L K+ ED
Sbjct: 235 GRECQYTSWIVPIAWHPTNQNAVIVVDLAKNPQPLIDLSSEELHQRLYTKREELAEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+PI ++HLN+ I ++ K L++ D N +++ + + I +K+ Y
Sbjct: 295 VPIKLVHLNKCAI-LAPAKTLTAENADHIGVDRNLCLEHL---ALLKQYPEIREKLIGLY 350
Query: 240 KIN----NSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
I +SD ++D +LY+ F S D + I+R P L+ ++ F +K++E L+F
Sbjct: 351 TIEREYKHSD---DVDTQLYDGFFSPADKAAMEIIRQADPVNLAALDISFSDKRIEPLLF 407
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLL--KKANEHDTKI 353
YRAR++ TLS +E +RW + F + ++ + L +E+L+ ++E I
Sbjct: 408 RYRARHYPLTLSDEEQRRWATHCRDYFES------HLEEYMLNLENLVHTHSSDEKKMAI 461
Query: 354 LNALLMYGKSIT 365
L ++ Y + I
Sbjct: 462 LKSVYRYVEDIA 473
>gi|408821504|ref|ZP_11206394.1| exonuclease I [Pseudomonas geniculata N1]
Length = 479
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 9/373 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+ + L LR K++V + + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWEYALKLRDKRFVGSLLDVTAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L D L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTISNRVIVFDLDGDIDDLLALPAEVIAQRLYMRASELPEGAA 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ +HLN+ P +I+ + + + + L+ A K + +K
Sbjct: 290 RVPLKEVHLNKVPALIAWNHLRADD---HARLGLDVAAIEAKVERLRAFAPQLAEKARQV 346
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y + ++D LY+ F D LA+ R+ +P++L+ + F + +L EL+F YR
Sbjct: 347 YNQPRAATVADVDASLYDGFPGNGDKPLLALARTTAPEQLAGLEGRFRDPRLPELLFRYR 406
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK---ILN 355
ARN ++L+ E +RW+ YR R Y + L D + +L
Sbjct: 407 ARNHPDSLAPPERQRWQDYRRQRLLGDGGLGELNLPQYQQQLDALAAEAPDDARRQALLQ 466
Query: 356 ALLMYGKSITQKI 368
+L +G+ + + +
Sbjct: 467 SLRDWGQQLQETL 479
>gi|323491335|ref|ZP_08096520.1| exonuclease I [Vibrio brasiliensis LMG 20546]
gi|323314461|gb|EGA67540.1| exonuclease I [Vibrio brasiliensis LMG 20546]
Length = 474
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 187/353 (52%), Gaps = 17/353 (4%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A Y L P GI WP G SFKLE LS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRACYALRPEGIEWPENEEGFISFKLESLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ +A+ ++ P+LF++ LS+R K+ + + P +++ M
Sbjct: 175 HENAHDAMADVIATIEMAKKVKAAQPKLFDYFLSMRHKRKLNELVDIVNMTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ +Y S + P+ HP N+N +I +L DP+ L D ++ L K + D
Sbjct: 235 GKECNYTSWIVPVAWHPTNQNAVICVDLAKDPQALLDLDTEQLNQRLYTKHSDLGPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++ LN+ PI ++ K L++ + D +N+ + + + I +K+ Y
Sbjct: 295 VPVKLVQLNKCPI-LAPAKTLTAENAEKIGIDREKCLENL---ALLRKHPEIREKLIGVY 350
Query: 240 KINNS-DLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
I + ++D LY+ F S D + I+R P L+ ++ F + ++ L+F YR
Sbjct: 351 AIEREYEKSQDVDSMLYDGFFSPADKAAMDIIRETDPNNLAALDISFNDDRIAPLLFRYR 410
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
ARNF TL E +RW + F ++ I + L +E+L A+EH++
Sbjct: 411 ARNFPWTLDESEQQRWALHCRDYFESR------IEDYMLNLENL---AHEHES 454
>gi|71732218|gb|EAO34273.1| Exodeoxyribonuclease I [Xylella fastidiosa Ann-1]
Length = 488
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 189/375 (50%), Gaps = 14/375 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+R+ +PYEREW+N SRWDL+++++ + L P GI WP + +G PSFKLEHL+ N+
Sbjct: 120 LFRHFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGAPSFKLEHLALANHA 179
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+ +AR R PRL+N+ L LR K++ + +P +I+
Sbjct: 180 REGTAHEALSDVYATISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQR 239
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYL---CFKKNSFKE 178
+ + + + P+ HP N +I ++L D L I D+L ++
Sbjct: 240 YPATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDLPEGEQ 299
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI--F 236
IP+ +HLN+ P +I+ + +S+ + L+ + K A + +K+
Sbjct: 300 RIPLKEVHLNKVPALIAWNHLRASDFT---RLGLDPSMLETKAAQLRACGPDLAEKVRHV 356
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ N ++ + D LY+ F++++D L LR+ L+ + +L EL+F
Sbjct: 357 FSHTYNTAN---DADASLYDGFLTEEDRRLLPQLRASPADTLATFEQRLRDPRLIELLFR 413
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKN-NLYNINMFYLEIESLLKKANEHDTK--I 353
YRARNF ETLS E RW YR R + + ++ +I L ++ TK +
Sbjct: 414 YRARNFPETLSCDEQTRWDTYRRRRLTTDTGLSELTFDQYHAQIAELRITHSQDATKQTL 473
Query: 354 LNALLMYGKSITQKI 368
L+ L +G +++ +
Sbjct: 474 LDQLAAWGSELSRTL 488
>gi|384227970|ref|YP_005619715.1| exonuclease I [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
gi|345538910|gb|AEO08887.1| exonuclease I [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
Length = 481
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 185/333 (55%), Gaps = 28/333 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G PSFKL L+ +NN
Sbjct: 115 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPSGIKWPKNELGLPSFKLSDLTKINN 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV AT+ +A+L++ PRLFNF L +RKK + I P YI+
Sbjct: 175 IVHLNAHDAVSDVYATIEMAKLVKQKQPRLFNFFLKIRKKNELYKLIDLKKFEPVIYISS 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWN-------LLHDPKKFLLNDINKIRDYLCFKK 173
F + +S + PI H N NILI + L+H KK +D+ F K
Sbjct: 235 YFGAVRHNMSCILPIAWHKNNSNILIAIDLFKNINELIHVCKKIYFDDV--------FIK 286
Query: 174 NSFKEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
N F D+ + +++LNR P+ ++ +K++ R F + + I + I N + K
Sbjct: 287 NLF--DLGVVLLYLNRCPM-LAPIKIMQKEDYNRLNFHRSSFDEKI---NLIKKNNFFIK 340
Query: 234 KIFLDY----KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKK 289
I + + KI++SD N+D E+YN+F + D + I+R+ P L N+NF F + +
Sbjct: 341 NIQIIFSQEKKIHDSD---NVDLEIYNSFFNLYDKKIIKIIRNTKPVFLKNMNFNFHDSR 397
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRF 322
L+ L+F YRARNF TL+ E K W KY + F
Sbjct: 398 LKNLLFRYRARNFFHTLNENEKKIWLKYCMKTF 430
>gi|374619234|ref|ZP_09691768.1| exonuclease I [gamma proteobacterium HIMB55]
gi|374302461|gb|EHQ56645.1| exonuclease I [gamma proteobacterium HIMB55]
Length = 487
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 9/351 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
WRN +PY RE+ SRWDLI++++AFY L P + WP +G PSFKLE L+ N+L
Sbjct: 111 LWRNFYDPYAREYSRGNSRWDLIDIVRAFYALRPNSLQWPKHADGSPSFKLEDLTAANDL 170
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H AHDA+SDV ATL LAR +R + LF+ +L R K V A + P +I+ +
Sbjct: 171 EHGAAHDAMSDVTATLALARALRGADEALFDRLLGQRFKARVEAMVDTHHMTPLVHISGL 230
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF--KED 179
F + + ++ P+ IHP K+ +I ++ +P FL + +I+ L KK +D
Sbjct: 231 FGTDRHCLGVIVPLAIHPDFKSDVICADITREP-SFLDMSVEEIQVRLFAKKEDLNSPDD 289
Query: 180 IPISM-IHLNRSPIVI--SNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
P M I +NR+P+++ S++ ++ + L ++ A + +
Sbjct: 290 RPSLMTIKVNRAPVLLPMSDITPETAQRLGLNGDRLRAHLSQLRAAREARGAAFTAECQD 349
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
+ Y+ ++ N D LY +F+ K+D + +R SP +L + F F + +L EL+F
Sbjct: 350 V-YRSAARPVDANPDTALYGSFVPKEDRGLVQEVREASPAELRDRRFAFSDSRLPELLFR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN 347
YRARN+ E LS E +W Y R + + +N+ MF +E+ ++ N
Sbjct: 409 YRARNWPEILSDAERLQW--YEHCRTQWETSEHHNLEMFQSALETEMQAEN 457
>gi|285018531|ref|YP_003376242.1| exodeoxyribonucleaseIprotein [Xanthomonas albilineans GPE PC73]
gi|283473749|emb|CBA16252.1| putative exodeoxyribonucleaseIprotein [Xanthomonas albilineans GPE
PC73]
Length = 492
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 188/374 (50%), Gaps = 11/374 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+ SRWDL+++++ + L P GI WP + +G SFKLE L+ N +
Sbjct: 123 LFRNFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALANGV 182
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDV AT+G+AR R PRL+ + L LR K++ + + +P +++
Sbjct: 183 RDGDAHEALSDVYATIGMARHFRRCQPRLWEYALKLRDKRFCASLLDVTAMQPVLHVSMR 242
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ HP + ++ ++L D L +I D L + E
Sbjct: 243 YPASRLCAAPVLPLTRHPRIDSRVVVFDLEGDINTLLRCTPEEIADRLYTPQADLPEGEQ 302
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
I + +HLN++P +++ + + + ++ A K A + +K+
Sbjct: 303 RIALKEVHLNKAPALVAWAHLREAEF---ERLGIDPAQALAKAARMREAGPTLAEKVRRV 359
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
+ + + ++D LY+ F++ D +A +R+ +P +L+ + F + +L EL+F YR
Sbjct: 360 FASERATMPADVDASLYDGFLADTDKRAMAQVRATAPMQLAPLEHGFRDPRLPELLFRYR 419
Query: 299 ARNFIETLSYKELKRWKKYRISRFYNKKNNLYNIN--MFYLEIESLLKKANEHDTK--IL 354
ARN+ +TLS E RW YR R N L + + ++ L E TK +L
Sbjct: 420 ARNWPQTLSIAEQTRWDDYRRRRL-EVDNGLSELTFETYAAQLADLRLAHPEDATKQALL 478
Query: 355 NALLMYGKSITQKI 368
+ L +G+ + + +
Sbjct: 479 DQLAAWGQDLQRTL 492
>gi|213580552|ref|ZP_03362378.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 342
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 166/305 (54%), Gaps = 13/305 (4%)
Query: 20 RWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRATLGL 79
RWDL++V++A Y L P GI WP ++G PSF+LEHL+ N + H AHDA++DV AT+ +
Sbjct: 1 RWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANGIEHSNAHDAMADVYATIAM 60
Query: 80 ARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHP 139
A+L++ PRLF+++ S R K + A I P +P +++ MF + S + P+ HP
Sbjct: 61 AQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHP 120
Query: 140 MNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--IPISMIHLNRSPIVISNL 197
N+N +I +L D L D + +R+ L K + +P+ ++H+N+ P V++
Sbjct: 121 ENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVKLVHINKCP-VLAQA 179
Query: 198 KVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---IFLDYK-INNSDLELNIDEE 253
L R + N+K + N + K IF + + SD N+D +
Sbjct: 180 NTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAIFAEAEPFATSD---NVDAQ 233
Query: 254 LYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKR 313
LY+ F S D + I+ P+ L ++ F +K++E+L+F YRARNF TL E +R
Sbjct: 234 LYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQR 293
Query: 314 WKKYR 318
W ++R
Sbjct: 294 WLEHR 298
>gi|254524666|ref|ZP_05136721.1| exodeoxyribonuclease I [Stenotrophomonas sp. SKA14]
gi|219722257|gb|EED40782.1| exodeoxyribonuclease I [Stenotrophomonas sp. SKA14]
Length = 479
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 171/325 (52%), Gaps = 10/325 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPDGIQWPLREDGATSFKLEHLAEANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+ + L LR K++V + +P +++
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWEYALKLRDKRFVGGLLDIAALKPVLHVSMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L D L I L + + E
Sbjct: 230 YPASRLCAAPVLPLAVHPTINNRVIVFDLDGDIDDLLELPAEVIAQRLYMRASELPEGVA 289
Query: 180 -IPISMIHLNRSPIVIS--NLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+P+ +H+N+ P +I+ +L+ + L+ A K + +K
Sbjct: 290 RVPLKEVHMNKVPALIAWNHLRADDHE-----RLGLDVAAIEAKVERLRPFAAQLAEKAR 344
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y + ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F
Sbjct: 345 QVYNQPRTATAADVDASLYDGFLGNGDKPLLALARTTAPEQLAALEGRFRDPRLPELLFR 404
Query: 297 YRARNFIETLSYKELKRWKKYRISR 321
YRARN +L+ E +RW+ YR R
Sbjct: 405 YRARNHPGSLAPAERQRWQDYRRQR 429
>gi|400406512|ref|YP_006589260.1| exonuclease I [secondary endosymbiont of Heteropsylla cubana]
gi|400364765|gb|AFP85832.1| exonuclease I [secondary endosymbiont of Heteropsylla cubana]
Length = 478
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 194/373 (52%), Gaps = 28/373 (7%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+ SRWD++N+++A Y L P GI WP + G+PSF+LE L+ N
Sbjct: 114 LFYRNFYDPYSWSWQKGNSRWDILNIVRACYALRPEGIKWPSNDKGQPSFRLEDLTLANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV ATL +A+LIR P+LF++ R+K+ + I +P YI+
Sbjct: 174 IKHYHAHDAMSDVYATLAIAKLIRQMQPKLFDYFYQYRRKQQLKLLIDISAMKPLIYISA 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKF--LLNDINKIRDYLCFKK--NSF 176
+F S I+L+ P+ HP N N +I +L D + L NDI + R Y + N
Sbjct: 234 IFGLIRSNIALVAPLAWHPANPNAIIVCDLSGDVQILANLDNDILRSRLYTKYNDTMNHD 293
Query: 177 KEDIPISMIHLNRSPIVIS--NLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK 234
+P+ +I+LN+ P + L+ L + + IK I N ++ K+
Sbjct: 294 TNAVPLQIIYLNKCPALAPAHTLRTLDAERL------------GIKIKHCINNLIWLRKQ 341
Query: 235 IFLDYKI-------NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
L KI + ++D +LY+ F S+ + + ++ S P+ + ++ F +
Sbjct: 342 SGLKEKIIMLFNETKHFTSSEDVDAQLYDAFFSRSERTSMELILSTPPEHIRSLEKFFTD 401
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN 347
+L+ L+F YRARNF TL+ E +W +YR +RF K Y + L+I S+ K
Sbjct: 402 PRLQPLLFRYRARNFPSTLNQDEHLKWLQYRKTRFNQKIIESY---LDKLKILSVTHKNC 458
Query: 348 EHDTKILNALLMY 360
T +LN L +Y
Sbjct: 459 NKKTHLLNKLYLY 471
>gi|194366373|ref|YP_002028983.1| exonuclease I [Stenotrophomonas maltophilia R551-3]
gi|194349177|gb|ACF52300.1| Exodeoxyribonuclease I [Stenotrophomonas maltophilia R551-3]
Length = 479
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 178/326 (54%), Gaps = 12/326 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
+RN +PYEREW+N SRWDL+++++ + P GI WP + +G SFKLEHL+ NN+
Sbjct: 110 LFRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPEGIQWPLREDGATSFKLEHLAEANNV 169
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
AH+ALSDVRAT+G+ARL + + PRL+++ L LR K++V + + +P +I+
Sbjct: 170 REGDAHEALSDVRATIGMARLFKQSQPRLWDYALKLRDKRFVGSLLDVAAMKPVLHISMR 229
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + + P+ +HP N +I ++L D L I L + + E
Sbjct: 230 YPASRLCAAPVLPLSMHPTVNNRVIVFDLDGDIDDLLELPAEVIAQRLYMRASELPEGAT 289
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFD---LNCAFKNIKCASSILNNTYIWKKI 235
+P+ + LN+ P +I+ L ++ R D + + ++ + L +++
Sbjct: 290 RVPLKEVQLNKVPALIA-WNHLRADDHARLGLDVAAIEAKAERLRAFAPQLAEKA--RQV 346
Query: 236 FLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
+ ++ N ++D LY+ F+ D LA+ R+ +P++L+ + F + +L EL+F
Sbjct: 347 YNQPRVANV---ADVDASLYDGFLGAGDKPLLALARTTAPEQLAALEGRFRDPRLPELLF 403
Query: 296 LYRARNFIETLSYKELKRWKKYRISR 321
YRARN ++L+ E +RW+ YR R
Sbjct: 404 RYRARNHPDSLAPDERQRWQDYRRQR 429
>gi|444921402|ref|ZP_21241238.1| Exodeoxyribonuclease I [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507440|gb|ELV07616.1| Exodeoxyribonuclease I [Wohlfahrtiimonas chitiniclastica SH04]
Length = 470
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 180/334 (53%), Gaps = 22/334 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY WKN SRWD +++++ Y L P GI WP K +G+ S KLE L+ N
Sbjct: 108 LFYRNFFDPYAYAWKNGNSRWDALDLVRGVYALRPEGIEWP-KIDGQTSLKLESLTKANG 166
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L+H AHDALSDV AT+ + +LI+ PR +++ R+ K +L I RP +++
Sbjct: 167 LNHDNAHDALSDVYATIDVLKLIKEKQPRFYDYFYQHRRAKDLLPIIEQHFGRPLVHVSG 226
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + Y+S++ P+ +HP NKN ++ +L D + L +I+ + E
Sbjct: 227 MFGEHNGYLSVVVPLTMHPWNKNAVVVVDLRGDLDELLNYSAEEIKAAMYTANEDLGEGR 286
Query: 180 --IPISMIHLNRSPIVISNLKVL--SSNLMFRYKFDLNCAFKNIKCASSILNNTYI---- 231
+P+ +IHLN+ PI IS + VL + NL Y DLN A + +I+N +
Sbjct: 287 SRVPLKLIHLNKCPI-ISPVNVLKYTQNL---YGLDLNAALDKV----AIVNGHHAELER 338
Query: 232 -WKKIFLDYKINNSD---LELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
++IF + D L ++ LY+ F D + + +S + L N ++ F++
Sbjct: 339 KAREIFAPTTAPSYDDQPLLSRVESMLYDGFFEFSDKKIMEEIPYLSEEALKNSHYQFKD 398
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISR 321
++ L+FLYRA+NF +L+ +E + W+ Y +R
Sbjct: 399 ARIAPLLFLYRAKNFPMSLTSEEYQEWEAYCDAR 432
>gi|254780661|ref|YP_003065074.1| exonuclease I [Candidatus Liberibacter asiaticus str. psy62]
gi|254040338|gb|ACT57134.1| exonuclease I [Candidatus Liberibacter asiaticus str. psy62]
Length = 471
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 184/367 (50%), Gaps = 19/367 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN + Y W N SRWDL++V++A Y SP GI WP +++G SFKL+ L+ N
Sbjct: 109 IFYRNFYDSYRWSWDNGNSRWDLLDVMRAIYAFSPDGIQWPSRDDGATSFKLQDLALANG 168
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA +DV ATL L LIR P+LF ++ R K + I P +++
Sbjct: 169 IEHVNAHDAKADVYATLALVWLIREKKPKLFEYLYDYRNKNQLRKLIDIQNMTPLVHVSG 228
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
MF + S +L+ P+ HP K+ +I NL D + F D ++ L + K
Sbjct: 229 MFGASRSNTALIAPVAWHPRYKDSVIGCNLSGDMRVFQDLDSVQLAKRLFTSHDELKGLV 288
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+PI +HLN+ PI++ + R+ D +N+ N +K I+
Sbjct: 289 PVPIKEVHLNKCPILMP-IDYCKKEHFERWGIDHKRCLENLTLLRQQTNLRDRFKAIYNK 347
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
++S ++D +LY+ F + D + + +P++LS +N F +++L EL F YR
Sbjct: 348 PYTSSSQ---DVDSQLYDGFFADVDRQIMDRILRTAPEQLSTLNLPFSDRRLPELFFRYR 404
Query: 299 ARNFIETLSYKELKRWKKYR-----ISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKI 353
ARNF TLS KE + W ++R SR KN L +++ Y K +E +
Sbjct: 405 ARNFPHTLSEKEKQDWLEHRKKMLTRSRIEEYKNKLQSLSGEY--------KGDEGKEGL 456
Query: 354 LNALLMY 360
+NAL Y
Sbjct: 457 INALYEY 463
>gi|414562904|ref|YP_005618095.1| exonuclease I [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311087440|gb|ADP67520.1| exonuclease I [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
Length = 505
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 195/364 (53%), Gaps = 31/364 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G SFKL L+ NN
Sbjct: 142 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNN 201
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A+SDV AT+ +A+L++ PRLF+F +RKK + I +P YI+
Sbjct: 202 IVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISA 261
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + + +S + PI H N NILI +L D K L+N KI CF K
Sbjct: 262 YFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLL 316
Query: 179 DIPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
D + ++HLNR PI+ I ++ N + ++F LN + IK + N I IF
Sbjct: 317 DSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNIKI---IF 373
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFC-FENKKLEELIF 295
K NN++ N+D E+YN F + KD K+ I+R+ P L ++ FC F + +L+ L F
Sbjct: 374 --SKNNNTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHI-FCNFHDSRLKNLFF 430
Query: 296 LYRARNFIETLSYKELKRWKKYRIS-----RFYNKKNNLYNINMFYLEIESLLKKANEHD 350
YRARNF TL E K W K+ ++ F KNN I+ LLKK + +
Sbjct: 431 RYRARNFFYTLDDNEKKIWLKHCMNVLNPVSFQEYKNN----------IQFLLKKYSNNT 480
Query: 351 TKIL 354
K++
Sbjct: 481 EKVV 484
>gi|257471605|ref|ZP_05635604.1| exonuclease I [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
Length = 505
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 178/322 (55%), Gaps = 16/322 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G SFKL L+ NN
Sbjct: 142 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNN 201
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A+SDV AT+ +A+L++ PRLF+F +RKK + I +P YI+
Sbjct: 202 IVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISA 261
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + + +S + PI H N NILI +L D K L+N KI CF K
Sbjct: 262 YFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLL 316
Query: 179 DIPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
D + ++HLNR PI+ I ++ N + ++F LN + IK + N I IF
Sbjct: 317 DSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNIKI---IF 373
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFC-FENKKLEELIF 295
K NN++ N+D E+YN F + KD K+ I+R+ P L ++ FC F + +L+ L F
Sbjct: 374 --SKNNNTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHI-FCNFHDSRLKNLFF 430
Query: 296 LYRARNFIETLSYKELKRWKKY 317
YRARNF TL E K W K+
Sbjct: 431 RYRARNFFYTLDDNEKKIWLKH 452
>gi|384227400|ref|YP_005619150.1| exonuclease I [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086276|gb|ADP66358.1| exonuclease I [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
Length = 505
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 178/322 (55%), Gaps = 16/322 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G SFKL L+ NN
Sbjct: 142 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNN 201
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A+SDV AT+ +A+L++ PRLF+F +RKK + I +P YI+
Sbjct: 202 IVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISA 261
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + + +S + PI H N NILI +L D K L+N KI CF K
Sbjct: 262 YFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLL 316
Query: 179 DIPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
D + ++HLNR PI+ I ++ N + ++F LN + IK + N I IF
Sbjct: 317 DSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNIKI---IF 373
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFC-FENKKLEELIF 295
K NN++ N+D E+YN F + KD K+ I+R+ P L ++ FC F + +L+ L F
Sbjct: 374 --SKNNNTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHI-FCNFHDSRLKNLFF 430
Query: 296 LYRARNFIETLSYKELKRWKKY 317
YRARNF TL E K W K+
Sbjct: 431 RYRARNFFYTLDDNEKKIWLKH 452
>gi|297183623|gb|ADI19749.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
Length = 480
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 177/329 (53%), Gaps = 21/329 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
WRNL +PY REW+N SRWDL++V++AF+ LSP G+ WP +++G SF+LE L+ N
Sbjct: 111 TLWRNLRDPYAREWQNGNSRWDLLDVVRAFWALSPNGLEWPQRDDGLTSFRLEDLTAANG 170
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DV AT+ +A+ ++ ++ RLF + + R K+ V A I P +P Y++
Sbjct: 171 IEHGAAHDALADVIATIEMAKRLKQSDARLFTTLYANRSKRAVSALIDIPRLKPIVYVSG 230
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+F + ++L+ P+ HP NK+ +I +L ++L + ++R+ L ++ +
Sbjct: 231 IFGAARHNLALIVPLAWHPDNKSEVICADLAGS-TEYLDQPVAELRESLFAPASARSKGA 289
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS---------ILNN 228
P++ + LNR+P+++ L+ R D + ++ + +
Sbjct: 290 VRPPLTAVRLNRAPVLLP-ADWLAGEAAERLGLDGDHHRAHLAALRAARAANEAAFVARF 348
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENK 288
+W+ + + D+ LY+ FI+ D + P L+ ++ F +
Sbjct: 349 QELWRDRAFPPRTDP-------DQMLYDGFINDADRALCQQILQQEPATLATQSWPFSDP 401
Query: 289 KLEELIFLYRARNFIETLSYKELKRWKKY 317
+L EL+F YRARNF ++LS E ++W+++
Sbjct: 402 RLPELLFRYRARNFPDSLSAGEGEQWREH 430
>gi|400405493|ref|YP_006588352.1| exonuclease I [secondary endosymbiont of Ctenarytaina eucalypti]
gi|400363856|gb|AFP84924.1| exonuclease I [secondary endosymbiont of Ctenarytaina eucalypti]
Length = 473
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 13/336 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY WK+ SRWD++NV++A Y L P G+ WP G PSF+L+HL+ NN
Sbjct: 114 LFFRNFYDPYGWSWKHGNSRWDILNVVRACYALRPEGVAWPLNTEGLPSFRLKHLTRANN 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV ATL +A+LIR P+LFN++ R K + I P +++
Sbjct: 174 IEHTNAHDAMTDVYATLEVAKLIRLAQPKLFNYLYRHRGKHQLKKLINIRQMTPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
+F + + + P+ HP N N LI +L D + + +R L ++ +
Sbjct: 234 LFGAARGNTAWIAPLAWHPNNPNALIVCDLSGDTRALADCNSEMLRTRLYTRRAELGSNP 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKI 235
+P+ ++HLN+ P++ +N + R + C ++ + + KK+
Sbjct: 294 AVPLQLVHLNKCPVLA------PANTLRRIDAE-RLGIHREHCLETLQWLKSRPEVKKKV 346
Query: 236 FLDYKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+ N S + N+D LY+ F S D ++IL++ SP+ L +++ + +L L+
Sbjct: 347 ISIFSENTSFISSSNVDTTLYDGFFSDADYAMMSILQTTSPEHLHSLDLSCVDPRLTPLL 406
Query: 295 FLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY 330
F YRARNF TL++ E RW ++R + ++ Y
Sbjct: 407 FRYRARNFPHTLNHDEQLRWLEHRKTLLTEQRRKDY 442
>gi|336451304|ref|ZP_08621742.1| exonuclease I [Idiomarina sp. A28L]
gi|336281675|gb|EGN74947.1| exonuclease I [Idiomarina sp. A28L]
Length = 482
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 188/374 (50%), Gaps = 19/374 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY W+N+ SRWDL+ +++A Y L P GI WP G S KL+ L+ N
Sbjct: 110 LFYRNFIDPYAYSWENDNSRWDLLTLVRATYALRPEGIEWPTNEEGNVSLKLDQLAPANG 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYV--LAEIGWPIARPFFYI 118
+ H AHDA++DV A++ LA+ I + P+L+N+ +R+KK + L E Y+
Sbjct: 170 IEHTNAHDAMADVHASIELAKKIMHAQPKLYNYSFDIRRKKKLIDLVESALLNQSMLVYV 229
Query: 119 THMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
+ F ++ Y+ ++PI HP N+N LI W L +P+ + +I L + +
Sbjct: 230 SGFFGAESRYVQWVFPIAFHPENQNQLIAWRLDANPEFWRDKSAAEINAQLFASREELQG 289
Query: 179 DIP-ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+ P + I LN+ P + K L+ D+ ++ ++L N + L
Sbjct: 290 ERPGLITITLNQCPFLAPE-KTLAEAQAQNAGIDIAA----VETNRALLANDSTLRDHLL 344
Query: 238 -------DYKINNSDLE-LNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENK 288
D + N D E + D LY F S + + +++ SP++L+ + ++
Sbjct: 345 AAILDKDDRLVANEDPERADADLALYSGGFFSAQAKTHMNMIQQASPEQLAGIELPLDDP 404
Query: 289 KLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANE 348
+L L+F +RARNF TLS E +RWK++ +R + + + F L++E L ++ +
Sbjct: 405 RLPVLLFRFRARNFPHTLSASEAERWKQHCQNRLVHGGEAFLSSDEFVLKLEQLAEQHQQ 464
Query: 349 HDTK--ILNALLMY 360
K IL +L Y
Sbjct: 465 DPRKMAILKSLADY 478
>gi|213025919|ref|ZP_03340366.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 338
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 162/301 (53%), Gaps = 13/301 (4%)
Query: 24 INVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRATLGLARLI 83
++V++A Y L P GI WP ++G PSF+LEHL+ N + H AHDA++DV AT+ +A+L+
Sbjct: 1 MDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANGIEHSNAHDAMADVYATIAMAQLV 60
Query: 84 RNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKN 143
+ PRLF+++ S R K + A I P +P +++ MF + S + P+ HP N+N
Sbjct: 61 KTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRN 120
Query: 144 ILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIHLNRSPIVISNLKVLS 201
+I +L D L D + +R+ L K + +P+ ++H+N+ P V++ L
Sbjct: 121 AVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVKLVHINKCP-VLAQANTLR 179
Query: 202 SNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---IFLDYK-INNSDLELNIDEELYNN 257
R + N+K + N + K IF + + SD N+D +LY+
Sbjct: 180 PEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAIFAEAEPFATSD---NVDAQLYDG 233
Query: 258 FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKY 317
F S D + I+ P+ L ++ F +K++E+L+F YRARNF TL E +RW ++
Sbjct: 234 FFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLEH 293
Query: 318 R 318
R
Sbjct: 294 R 294
>gi|319942625|ref|ZP_08016933.1| hypothetical protein HMPREF9464_02152 [Sutterella wadsworthensis
3_1_45B]
gi|319803804|gb|EFW00736.1| hypothetical protein HMPREF9464_02152 [Sutterella wadsworthensis
3_1_45B]
Length = 502
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 189/390 (48%), Gaps = 27/390 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPY----------KNNGKPS- 49
+FWRN ++PY W CSRWDL V+ A + L I WP K G+
Sbjct: 116 LFWRNFLDPYTHSWAKGCSRWDLFPVVCAAWALRGDTIKWPRWEEIDPIKYPKAEGRKGV 175
Query: 50 -FKLEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIG 108
FKLE L+ N + H AHDALSDV AT+G+A+L+ P+L+ + R V A +
Sbjct: 176 CFKLEFLTKANGIEHGHAHDALSDVEATIGMAKLLAEREPKLWRWAFENRTTAKVSAAVA 235
Query: 109 WPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDY 168
+P ++T F + C K+ W+L DP +I+
Sbjct: 236 --DMKPVVWVTPKFGIARGCTGIA--ACFF-QEKHDCWMWDLSFDPTVLQSLSYEEIKQR 290
Query: 169 L---CFKKNSFKEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSI 225
L ++ E +PI + N SP V +NLKVLS +Y DL+ A N++ ++
Sbjct: 291 LFPSIKERAQGIERLPIRRLKANASPFVCANLKVLSRERAQKYGIDLDVAAANLQKLKAV 350
Query: 226 LNNTY-IWKKIFLDYKINNSDL-ELNIDEELYNNFISKKDNLKLAILRSMSPKKLS--NV 281
I+ ++ + + N++ + D LY+ F S D + +RSM P+ L+
Sbjct: 351 APAVQTIFAELAAERRSNDAAAPSADPDRSLYSGFASSGDKARFVQIRSMMPEHLAAEAP 410
Query: 282 NFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIES 341
F F+++K E++F +RARN+ E LS +E +RW+++ R + ++ + ++ ++ +I+
Sbjct: 411 KFRFDDQKFAEMLFRFRARNWPEMLSAEETERWRQFCADRIMSGRDGMLQLSDYFDQIDE 470
Query: 342 LLKKA---NEHDTKILNALLMYGKSITQKI 368
+E ++L AL +G+++ ++
Sbjct: 471 AQASGLYDDERHQQVLEALYDWGETLGNRL 500
>gi|381394062|ref|ZP_09919780.1| exodeoxyribonuclease I [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330334|dbj|GAB54913.1| exodeoxyribonuclease I [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 494
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 202/382 (52%), Gaps = 21/382 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+ +RNL YERE+K+N SRWD+I++++A Y L P I WP +GKP FKLE L+ N+
Sbjct: 115 LLFRNLFPVYEREFKHNNSRWDVIDLVRACYALRPQQIAWPLYEDGKPCFKLEALTQANS 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+ALSDV AT+ +A+LI+ P+L+++ LR K V + F +++
Sbjct: 175 IEHTAAHNALSDVHATINIAKLIKTKQPKLYDYYWQLRNKHTVNDMLQQFQKNIFVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK--- 177
SS S++ P+C HP NKN +I +LL F N+ +++ L + +
Sbjct: 235 FISSVQGCCSIIMPVCSHPHNKNAVICIDLLKPINLFEENEPQQLKQALFTQTSVSDSSS 294
Query: 178 --------EDIP-ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNN 228
D P + I +N+ P V + +K LS + D++ A K+ K +++ +
Sbjct: 295 SAALVDAVADTPRLYNIAINKCPFV-APIKTLSGERAAQLGIDVDLAIKHYKRLANLPHL 353
Query: 229 TYIWKKIFLDYKINNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFEN 287
+ ++ + + NIDE+LY ++F S D +R P++L+ + FE+
Sbjct: 354 KDLCTGVYAQADVK--PVPDNIDEQLYTSDFPSPADTRLKDFVRQQLPEQLAAFSGKFES 411
Query: 288 KKLEELIFLYRARNFIETLSYKELKRWKKYRISRFY--NKKNNLYNINMFYLEIESLLKK 345
L +L+F YRARN+ L E+ RW+++ R NKK+ L ++ F+ I+ L ++
Sbjct: 412 ALLNKLLFRYRARNYPNLLDENEITRWQQHVQERLTQGNKKSCL-SLQEFFESIDELSQE 470
Query: 346 ANEHDT--KILNALLMYGKSIT 365
++ KIL +L Y + +T
Sbjct: 471 YQQYPEKMKILQSLQRYAQQLT 492
>gi|419413191|ref|ZP_13953843.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15E]
gi|378258623|gb|EHY18439.1| exonuclease I, 3' -- 5' specific deoxyribophosphodiesterase
[Escherichia coli DEC15E]
Length = 462
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 161/297 (54%), Gaps = 13/297 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 114 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 174 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 234 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNA 293
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + +K+
Sbjct: 294 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 349
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLE 291
+ SD N+D +LYN F S D + I+ P+ L ++ F +K++E
Sbjct: 350 FAEAEPFTPSD---NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIE 403
>gi|261855671|ref|YP_003262954.1| exodeoxyribonuclease I [Halothiobacillus neapolitanus c2]
gi|261836140|gb|ACX95907.1| Exodeoxyribonuclease I [Halothiobacillus neapolitanus c2]
Length = 495
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 196/393 (49%), Gaps = 39/393 (9%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL +PY EWK+ SRWD+++ +AF +L P GI WP G P+ +LE L+ VN
Sbjct: 108 MFWRNLRDPYAHEWKSGNSRWDVLDAARAFRLLRPEGIHWPTDEQGAPTLRLEALTKVNV 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H AHDAL DV ATL ARL+R +P+LF ++LSLRKK V + P F +++
Sbjct: 168 IAHANAHDALGDVEATLAFARLMRAQSPKLFEYLLSLRKKAVVADFVDNPERASFVHVSG 227
Query: 121 MFSSKHSYISLMWPIC-IHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED 179
SS S+ + + +N L+ W+L DP + L +D+ + F +++ +D
Sbjct: 228 RISSTLGSASVFANLGQVQGINTQRLL-WDLRFDPTEVLDDDMETLA-ARRFLRDADAQD 285
Query: 180 ----IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASS----ILNNTYI 231
+PI ++HLNR+P+V+ N + +++ R + DL+ KN + + + + +
Sbjct: 286 NQHRLPIKLLHLNRAPVVVPNAILKEGDIVERMQLDLDAVQKNTRTMAQFKREVADKLHA 345
Query: 232 WKKIFLDYKINNSDLEL------NIDEELYNNF-----------ISKKDNLKLAILRSMS 274
+ + +++ L N+D ++F S +D LR +
Sbjct: 346 VLAEQMAFASQDAECALYEGFMPNVDRYALDDFNRVFDQAMAAGGSAQDEPVTEALRKLM 405
Query: 275 PKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLY-NIN 333
+ +++ +L EL+F + AR + L+ E +W+ + SR + Y
Sbjct: 406 AQ-------SWQDARLPELVFRFVARLRPDLLNEDERTQWQSWVDSRLNAAPDQRYMGFA 458
Query: 334 MFYLEIESLLKKA---NEHDTKILNALLMYGKS 363
F+ I++L+ A +E +L L +G++
Sbjct: 459 GFFAAIDALMADAAYRDEATLALLTQLKAWGET 491
>gi|325971901|ref|YP_004248092.1| exodeoxyribonuclease I [Sphaerochaeta globus str. Buddy]
gi|324027139|gb|ADY13898.1| Exodeoxyribonuclease I [Sphaerochaeta globus str. Buddy]
Length = 471
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 186/374 (49%), Gaps = 26/374 (6%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYK--NNGKPSFKLEHLSFVN 59
+RN ++PY+REW N CSRWD+I++++A Y L P GI WP + G P+F+L L+ N
Sbjct: 115 LYRNFLDPYKREWDNYCSRWDIIDLVRAAYDLRPEGIAWPPRKEETGNPTFRLVALTQAN 174
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYIT 119
N+ AHDAL DVRAT+ +ARLI+ P+L+ + +LR K V + P P Y
Sbjct: 175 NIEQVGAHDALVDVRATIAIARLIKEKQPKLYEYYFALRAKTQVKKVVQTPFGEPVLYTA 234
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED 179
FS L+ PI N N +I ++L D L + L + F
Sbjct: 235 AFFSKNEGCSRLITPITHMKSNANAIICFDLSKDVAPLL----QATEETLLKTEGVF--- 287
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA-FKNIKCASSILNNTYIWKKIF-L 237
+ +N+ P V S L VL+ L + D A F++ I+N T + +
Sbjct: 288 ----TLSINKCPFV-SPLNVLTDQLAIKLGIDKELALFRH----QQIVNQTKLLMTARNI 338
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ K D ++D +LY+ F D + ++R PK +++ FE+ ++ L+F +
Sbjct: 339 EEKYEGVD---DVDFQLYDRFFGDADQKRFNLIRQAEPKDKLSLHLDFEDNRVAPLLFRH 395
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNL-YNINMFYLEIESLLK--KANEHDTKIL 354
ARN+ E L+ ++ ++W+ + +R N ++ N N F +IE L + + + ++L
Sbjct: 396 VARNWSEVLTDEQKRKWRSFCANRTLNPPGSIKMNWNFFKRKIEEKLASTETSAEEKRVL 455
Query: 355 NALLMYGKSITQKI 368
L YG+ + KI
Sbjct: 456 ADLKAYGEELETKI 469
>gi|15617148|ref|NP_240361.1| exonuclease I [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11386767|sp|P57620.1|EX1_BUCAI RecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; AltName:
Full=DNA deoxyribophosphodiesterase; Short=dRPase
gi|25403649|pir||G84994 exodeoxyribonuclease I (EC 3.1.11.1) [imported] - Buchnera sp.
(strain APS)
gi|10039213|dbj|BAB13247.1| exodeoxyribonuclease I [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
Length = 413
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 171/307 (55%), Gaps = 16/307 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G SFKL L+ NN
Sbjct: 115 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNN 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A+SDV AT+ +A+L++ PRLF+F +RKK + I +P YI+
Sbjct: 175 IVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISA 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + + +S + PI H N NILI +L D K L+N KI CF K
Sbjct: 235 YFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLL 289
Query: 179 DIPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
D + ++HLNR PI+ I ++ N + ++F LN + IK + N K IF
Sbjct: 290 DSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNI---KIIF 346
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFC-FENKKLEELIF 295
K NN++ N+D E+YN F + KD K+ I+R+ P L ++ FC F + +L+ L F
Sbjct: 347 --SKNNNTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHI-FCNFHDSRLKNLFF 403
Query: 296 LYRARNF 302
YRARNF
Sbjct: 404 RYRARNF 410
>gi|374317087|ref|YP_005063515.1| exonuclease I [Sphaerochaeta pleomorpha str. Grapes]
gi|359352731|gb|AEV30505.1| exonuclease I [Sphaerochaeta pleomorpha str. Grapes]
Length = 471
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 25/333 (7%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYK--NNGKPSFKLEHLSFVN 59
+RN ++PY+REW+NNCSRWD+I++++A Y L P GI WP + NG P+FKL L+ N
Sbjct: 115 LYRNFLDPYKREWENNCSRWDIIDLVRAAYDLRPEGIAWPPRKAENGNPTFKLTSLTEAN 174
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYIT 119
+ + AHDAL DV AT+ +ARLI+ PRL+ + LRKK V + P P Y
Sbjct: 175 TIEQEGAHDALVDVMATISMARLIKEKQPRLYAYYYGLRKKAKVKEVVTTPFGEPVLYTA 234
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED 179
FS+K L+ P+ P N N ++ ++L D + +N + D
Sbjct: 235 SFFSTKEGCSRLIVPLTPLPDNGNSILCFDLSKDVAPL----------FQATSENIMQVD 284
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCA---FKNIKCASSILNNTYIWKKIF 236
I + +N+ P V S + VL+ L + D A + I +L +K+ F
Sbjct: 285 -GIFTLAVNKCPFV-SKMSVLTDKLAVKLGIDKELAMFRYNQICSQPRLLLLGREYKETF 342
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
K + D LY+ F D+ + ++R PK ++N F++ + +L+F
Sbjct: 343 EPVK--------DADFLLYDGFFPDSDHKRFELIRKAEPKDKLSLNLAFDDPRSSQLLFR 394
Query: 297 YRARNFIETLSYKELKRWKKYRISRFYNKKNNL 329
+ RN++E L +K+W+ + +R N N+
Sbjct: 395 HVCRNWVEVLDEPTMKKWRSFCANRILNPPGNI 427
>gi|437402598|ref|ZP_20751851.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435205923|gb|ELN89491.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
Length = 402
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 155/294 (52%), Gaps = 13/294 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENK 288
+ SD N+D +LY+ F S D + I+ P+ L ++ F +K
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDK 402
>gi|289804761|ref|ZP_06535390.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 321
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 153/289 (52%), Gaps = 13/289 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MF+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 1 MFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 60
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 61 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 120
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 121 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 180
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 181 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 236
Query: 239 YK----INNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNF 283
+ SD N+D +LY+ F S D + I+ P+ L +++
Sbjct: 237 FAEAEPFATSD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDY 282
>gi|330860010|emb|CBX70337.1| exodeoxyribonuclease I [Yersinia enterocolitica W22703]
Length = 337
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 174/345 (50%), Gaps = 15/345 (4%)
Query: 27 IKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNN 86
++A Y L P GI WP G PSFKLEHL+ N + H AHDA+SDV AT+ +A+ ++
Sbjct: 1 MRACYALRPEGIVWPENEEGLPSFKLEHLTKANGVEHLHAHDAMSDVYATIAMAKRVKQA 60
Query: 87 NPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILI 146
PRLF+++ R K + A I P +++ MF + S + P+ HP NKN +I
Sbjct: 61 QPRLFDYLYQHRSKHKINALIDIADMTPLVHVSGMFGAARGNTSWVAPLAWHPENKNAVI 120
Query: 147 TWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSPIVISNLKVLSSN 203
+L D L D + +R+ L +++ +P+ ++H+N+ P++ +L N
Sbjct: 121 MCDLAGDMSPLLELDSDTLRERLYTRRDKLSAQDAAVPLKLVHINKCPVLAPAKTLLPEN 180
Query: 204 LMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF-LDYKINNSDLELNIDEELYNNFISKK 262
R D +N++ + N + +K+ L + + ++D +LYN F S
Sbjct: 181 -ADRLGIDRQRCLQNLQL---LRQNPQVREKVVALFAEAEPFAVSDDVDAQLYNGFFSDA 236
Query: 263 DNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRF 322
D + I+ + L ++ F++ +LE L+F +RARN+ TL+ E +RW ++R
Sbjct: 237 DRATMKIILQTEAQNLPALDLTFQDPRLEALLFRFRARNYPNTLTDSEQQRWLEHRREAL 296
Query: 323 YNKKNNLYNINMFYLEIESLLKKANEHDTK--ILNALLMYGKSIT 365
+K + + L++E+L + + K +L AL Y + +
Sbjct: 297 NPEK-----VQDYVLQLEALYNQYEDDKEKLALLKALFDYARDLV 336
>gi|148927622|ref|ZP_01811085.1| Exodeoxyribonuclease I [candidate division TM7 genomosp. GTL1]
gi|147887031|gb|EDK72536.1| Exodeoxyribonuclease I [candidate division TM7 genomosp. GTL1]
Length = 476
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 173/326 (53%), Gaps = 10/326 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
WRN +PYE WK+ SRWDL++V++ L P GI WP + KP+ +LE L+ NNL
Sbjct: 114 LWRNFHDPYEWAWKDGRSRWDLLDVVRMTRALRPGGIVWPVDKSDKPTNRLELLTSENNL 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDV A + + R++R+ P+LF ++ S+R KK V + +P Y +
Sbjct: 174 EHSQAHDALSDVYALIAITRMVRDKQPKLFEYLFSIRDKKAVTQLVNPYKPKPIVYTSGR 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
+ + + S+++PI ++L H+P++F +I+ L K K+
Sbjct: 234 YDANYHKTSVVFPIA-EGSRPGTTFVYDLRHNPQQFTDLSPEEIKKRLLAKWEERKDPNF 292
Query: 180 --IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-IWKKIF 236
IP+ + NR+P V + L VL + ++ + ++ +L + + KI
Sbjct: 293 VAIPVKEVTHNRAPAV-APLGVLEQGGGWE---NIQLTNETVRKHLEVLQRSPDLVTKIK 348
Query: 237 LDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFL 296
Y+ + + + +LY++F++ KD + +R+ S ++L++ + F +K+L L+
Sbjct: 349 TAYESRSFPKSSDAEAQLYDSFLNDKDKTHIQAVRNASERELADFHPEFNDKRLPPLLIR 408
Query: 297 YRARNFIETLSYKELKRWKKYRISRF 322
Y+ARNF +LS +E W+ YR +R
Sbjct: 409 YKARNFPRSLSEEEQVEWEAYRATRL 434
>gi|330837024|ref|YP_004411665.1| exodeoxyribonuclease I [Sphaerochaeta coccoides DSM 17374]
gi|329748927|gb|AEC02283.1| Exodeoxyribonuclease I [Sphaerochaeta coccoides DSM 17374]
Length = 474
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 190/380 (50%), Gaps = 34/380 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWP-YKNNGKPSFKLEHLSFVN 59
+ +RNLI+PY REW + SRWD++++I+A + L P + WP K+NG P FKL L+ N
Sbjct: 111 LLYRNLIDPYRREWADGNSRWDVLDLIRAAHDLRPDSLAWPPSKDNGNPVFKLTELTTAN 170
Query: 60 NLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYIT 119
N+SH+ AHDALSDV ATL ++RL++ NP+LF + LSLR KK V + P PF +
Sbjct: 171 NISHEHAHDALSDVYATLAISRLLKERNPQLFVWALSLRDKKKVKEIVNPPFGTPFLHTC 230
Query: 120 HMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKK-FLLNDINKIRDYLCFKKNSFKE 178
F++ + I P N N +I ++L D F +D + +R
Sbjct: 231 ASFTTPRGCTRPVVAISFVPSNPNSVICFDLTQDLDPLFTASDEDIMR------------ 278
Query: 179 DIP-ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P + I LN+ P V S L VL + + D I +++ I ++I L
Sbjct: 279 -VPGVLRIALNKCPFV-SPLSVLGKDDAIARRLD-------IDMKTAMARYERIRQEINL 329
Query: 238 DYK----INNSDLELNIDEEL---YNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
+ + + E D + F S D + +I+R + ++N F++ +
Sbjct: 330 PSRFRSAVERDEYEQVADPDFRIYAGGFFSDADRERFSIVRKTEASQKLSLNLRFDDSRA 389
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYL-EIESLLKKAN-- 347
E+++ Y RN+ ETL ++ RW+ + +R N ++ FY +I+ L+ +
Sbjct: 390 PEMVWRYVCRNWPETLDEQQKARWQSFSANRILNPPGDIMVTWQFYTRKIQEKLQSNDTP 449
Query: 348 EHDTKILNALLMYGKSITQK 367
H+ +L AL +G+ I ++
Sbjct: 450 AHEKPVLAALKEWGEMIARE 469
>gi|118602911|ref|YP_904126.1| exodeoxyribonuclease I subunit C [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567850|gb|ABL02655.1| Exodeoxyribonuclease I subunit C [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 471
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 188/367 (51%), Gaps = 12/367 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLS-PYGITWPYKNNGKPSFKLEHLSFVNN 60
+RN I+PY W+N +RWD++NV++ Y L + W Y G P FKL+ LS N+
Sbjct: 108 LYRNFIDPYTWHWQNGNTRWDILNVVRLCYALKKDTSLKWVYDKQGNPVFKLDQLSLAND 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DV AT+ +A++I+ P+LFN+ SLR+KK V ++I + P + T
Sbjct: 168 IEHANAHDALADVHATIAIAKIIKQTQPQLFNYSFSLREKKTVASKIS--LFEPMLHTTD 225
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M ++ S L + HP + ++ +NL DP L DI ++ K++ +++
Sbjct: 226 MHPAQLSCTRLSVALAYHPEYNDRVLMFNLDQDPCVLLELDIEALKTLTFTKQSELSKEV 285
Query: 181 P---ISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
I + N+SP+ + N+ L ++ + D+N +++ S I +N KI
Sbjct: 286 ERLQIKELIFNKSPMFVPNIYKLEPKIIKQLNIDMNQCMQHL---SFIKDNQLKIGKIVQ 342
Query: 238 D-YKINNSDLEL-NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
D YK + + L +D+ LY+ FI D ++++S KL + F+++KL L
Sbjct: 343 DLYKNDQKHIALKEVDQSLYDGFIDNTDKRICNQIQALSVHKLKEFHPKFKDEKLSRLFM 402
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILN 355
++ARN+ TL+ E + W + R +N I+ YL+ + ++ + H K+
Sbjct: 403 HFKARNYPNTLTENEKEDWFEIVQGRIQTNQNGYITIDD-YLQKINTMRTQHPHQEKLWQ 461
Query: 356 ALLMYGK 362
L Y K
Sbjct: 462 QLEAYSK 468
>gi|310780268|ref|YP_003968600.1| Exodeoxyribonuclease I [Ilyobacter polytropus DSM 2926]
gi|309749591|gb|ADO84252.1| Exodeoxyribonuclease I [Ilyobacter polytropus DSM 2926]
Length = 487
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 20/353 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R +PYEREWKNNCSRWD + I YV+ P + WP K++G+PSF+LE LS N
Sbjct: 108 LFYRTFRDPYEREWKNNCSRWDFMRAILGVYVMKPELLKWPLKDDGRPSFRLEELSIANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDA SDV AT+GLA LI +P +F++ +LR K +V +E+ F +I
Sbjct: 168 IIHENAHDAKSDVYATIGLAELISKKSPNVFDYFFNLRDKDFVKSELS--KDELFLHIDF 225
Query: 121 MFSSKHSYISLMWPIC--IHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
+ Y S+++ I I+ +KN + ++L D + D ++I++YL + N E
Sbjct: 226 GYGYDRGYASIIYKIGDFINQGDKNAFLFIDILSDVENLEKMDFDEIKEYLYY-SNEKLE 284
Query: 179 DIPIS-----MIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
+I I+ I +N+SP+VI L F + +N +K I + K
Sbjct: 285 EIGITRPGLKQIRINQSPLVIP-YNNLREKPKFLEEISVNLKYK----MEKIKKLSAKRK 339
Query: 234 KIFLDYKINNSD-LELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEE 292
+ FL+ D ++++ D ++Y +F S+ D ++A + + + + F++KK +E
Sbjct: 340 EEFLNVFTREKDKVKIDADLDIYGSFASQWDKKEMAAMHRENYQYIPK----FKDKKYKE 395
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKK 345
L F + RN E L+ E+ WK++ N++ NI+ EI L KK
Sbjct: 396 LYFRFIGRNMPEILTEDEMSEWKRHCYKCISNEREGFQNIDSLKNEILELEKK 448
>gi|422349987|ref|ZP_16430875.1| hypothetical protein HMPREF9465_01765 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657836|gb|EKB30718.1| hypothetical protein HMPREF9465_01765 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 489
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 19/380 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKP--------SFKL 52
+FWRN ++PY + +N CS WDL ++ A + L GI WP + + P SF+L
Sbjct: 111 LFWRNFLDPYSHQHRNGCSCWDLYPLVCAVWALRGDGIKWPLRKDVDPESNDERSVSFRL 170
Query: 53 EHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIA 112
E LS N + H +H+ALSD ATLGLA LIR PRL+ + L R ++ V A +
Sbjct: 171 ECLSKANGIVHAHSHEALSDAMATLGLAVLIRKTEPRLWKWALENRSREAVKAAV---TK 227
Query: 113 RPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFK 172
P +I+ F ++ + I + N + W+L DP +I+ L +
Sbjct: 228 GPVVWISPKFGQARGFLRIAARIPFPGESGNSALMWDLSVDPLIVTKLSDEEIKSRLFAR 287
Query: 173 KNSF---KEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNT 229
+ +E +P+ + +N SP V +NLKVLS M R+ N + + N
Sbjct: 288 REDLADGEEPLPVYRLAMNNSPFVCANLKVLSPERMDRFGVKPQEILANWERFKELGN-- 345
Query: 230 YIWKKIFLDYKINNSDLELNIDEELYN-NFISKKDNLKLAILRSMSPKKLSNVNFCFENK 288
I ++ ++D LY+ F S D +A +R M+P+ L+ F+++
Sbjct: 346 VIAGRLAGLMGRRERPAPKDVDFGLYDGGFASGHDVEMMARVRGMTPESLAKGGIHFDDE 405
Query: 289 KLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANE 348
+ +L+ YRARN+ ETL+ +E +W + SR + + ++ ++ EI+ L + E
Sbjct: 406 RFNQLLVRYRARNWQETLNDEERSQWTFFCRSRLMDGADGALTVSAYFDEIDRLQESTLE 465
Query: 349 HDTK--ILNALLMYGKSITQ 366
+ K +L AL +G+ +
Sbjct: 466 DEEKQLVLEALYEWGERAGE 485
>gi|260072659|gb|ACX30556.1| exonuclease I [uncultured SUP05 cluster bacterium]
Length = 422
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 185/356 (51%), Gaps = 11/356 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPY-GITWPYKNNGKPSFKLEHLSFVNN 60
+RN I+PY WK+ +RWD+++V++ Y L + W + GKP FKL+ LS N
Sbjct: 59 LYRNFIDPYAWHWKDGNTRWDILDVVRLCYALKKDNSLKWVHNEEGKPVFKLDQLSLANG 118
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+G+A++I+ P+LF++ SLR+KK V +I + P + +
Sbjct: 119 IEHANAHDALADVRATIGIAKIIKETQPQLFDYAFSLREKKTVEGKIK--LFEPMLHTSG 176
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ + S L + HP + I +NL DP L D+ +++ + K++ + +
Sbjct: 177 MYPATLSCTRLAVALAYHPEYNDRAIVFNLDQDPSILLELDVEELKTLMFTKQSELPDGV 236
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
I + N+SP+ + N+ L ++ + + D++ + + I +N K+
Sbjct: 237 KRLEIKDLIFNKSPMFVPNVYKLDPKVVEQLQIDMDTRMQRLDF---IKDNQSAINKVVQ 293
Query: 238 DYKINNSDLE--LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
D N+ + +++D+ LY+ F+ D ++ +S +L + F+++KL L+
Sbjct: 294 DLYRNDKERAPTVDVDQALYDGFMDNADKRIGEQVQRLSVDELKKFHPKFKDQKLSTLLM 353
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
++ARN+ +L+ E + W + R +N +++ +Y I + K+ E +T
Sbjct: 354 HFKARNYPNSLTEDEAEDWFETVQGRIQAGENGYTSLDDYYQRITLMQKQHPEKET 409
>gi|269468419|gb|EEZ80084.1| exonuclease I [uncultured SUP05 cluster bacterium]
Length = 471
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 185/356 (51%), Gaps = 11/356 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPY-GITWPYKNNGKPSFKLEHLSFVNN 60
+RN I+PY WK+ +RWD+++V++ Y L + W + GKP FKL+ LS N
Sbjct: 108 LYRNFIDPYAWHWKDGNTRWDILDVVRLCYALKKDNSLKWVHNEEGKPVFKLDQLSLANG 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDAL+DVRAT+G+A++I+ P+LF++ SLR+KK V +I + P + +
Sbjct: 168 IEHANAHDALADVRATIGIAKIIKETQPQLFDYAFSLREKKTVEGKIK--LFEPMLHTSG 225
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
M+ + S L + HP + I +NL DP L D+ +++ + K++ + +
Sbjct: 226 MYPATLSCTRLAVALAYHPEYNDRAIVFNLDQDPSILLELDVEELKTLMFTKQSELPDGV 285
Query: 181 ---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
I + N+SP+ + N+ L ++ + + D++ + + I +N K+
Sbjct: 286 KRLEIKDLIFNKSPMFVPNVYKLDPKVVEQLQIDMDTRMQRL---DFIKDNQSAINKVVQ 342
Query: 238 DYKINNSDLE--LNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIF 295
D N+ + +++D+ LY+ F+ D ++ +S +L + F+++KL L+
Sbjct: 343 DLYRNDKERAPTVDVDQALYDGFMDNADKRIGEQVQRLSVDELKKFHPKFKDQKLSTLLM 402
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
++ARN+ +L+ E + W + R +N +++ +Y I + K+ E +T
Sbjct: 403 HFKARNYPNSLTEDEAEDWFETVQGRIQAGENGYTSLDDYYQRITLMQKQHPEKET 458
>gi|343519331|ref|ZP_08756315.1| exodeoxyribonuclease I [Haemophilus pittmaniae HK 85]
gi|343392797|gb|EGV05358.1| exodeoxyribonuclease I [Haemophilus pittmaniae HK 85]
Length = 345
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 141/267 (52%), Gaps = 9/267 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL++V++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 69 FYRNFIDPYEYSWKNGNSRWDLLDVVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 128
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF F L R K+ V I P +++ M
Sbjct: 129 EHENAHDAMADVYATIAMAKLIKEKQPKLFQFFLEHRGKREVEKLIDTAEMTPLVHVSGM 188
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ + + P+ HP N+N +I +L D L +R L KK+ +E
Sbjct: 189 LGNYRGNCAWVAPLAWHPTNQNAVIVCDLSGDIDNLLCKSAVDLRQDLYTKKSKLEERGV 248
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
+P+ ++H+N+ PI+ +L N R D N+ L+ +IF
Sbjct: 249 SSVPLKLVHINKCPILAPAKTLLPENAA-RLGIDRQYCLDNLAKLRQSLDVREKVIEIFA 307
Query: 238 DYK-INNSDLELNIDEELYNNFISKKD 263
+ + +SD N++ ELYN F S D
Sbjct: 308 EEREFGSSD---NVETELYNGFFSNAD 331
>gi|161485723|ref|NP_660867.3| exonuclease I [Buchnera aphidicola str. Sg (Schizaphis graminum)]
gi|25090272|sp|Q8K923.1|EX1_BUCAP RecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; AltName:
Full=DNA deoxyribophosphodiesterase; Short=dRPase
gi|21623449|gb|AAM68078.1| exodeoxyribonuclease I [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 482
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 184/349 (52%), Gaps = 21/349 (6%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN ++PYE WKNN SRWDL+NV++A Y L P GI WP G P FKL L+ NN
Sbjct: 116 IFYRNFLDPYEWSWKNNNSRWDLLNVVRACYALRPSGIQWPKNEFGLPVFKLSDLTQKNN 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+SH AHDA SDV AT+ LA+LI+ P+LF+F RKK + I P Y++
Sbjct: 176 ISHYNAHDATSDVYATIELAKLIKRKQPKLFDFFFKYRKKNELCRLIDIEKFTPIIYVSS 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + +S + P+ NKNILI+ +L D K ++ + S K+
Sbjct: 236 YFGALRQNMSCILPLSWDLHNKNILISIDLFKDIDKLIV-----FCKTVSISNISIKDLF 290
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
D+ I +++LNR PI ++ +KV+ R F +K I + K + L
Sbjct: 291 DLGIVLVYLNRCPI-LAPIKVIRKEDTNRLNFKKYFYYKKINLVKKNYFLIDLVKNVLL- 348
Query: 239 YKINNSDLELNIDEELYNNFISKKD-NL--KLAILRSMSPKKLSNVNFCFENKKLEELIF 295
K N + LN+D ++Y++F + D NL K+++ +S KK+ F++ +L+EL F
Sbjct: 349 -KKNENKNSLNVDLQIYDSFFNFHDKNLIKKISLTKSSDLKKMK---LDFKDPRLKELFF 404
Query: 296 LYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK 344
Y+ARNF L E K W Y + K N + + + +IESLLK
Sbjct: 405 RYKARNFFNILKNDEKKEWINYCL-----KTLNSFFLTGYIDKIESLLK 448
>gi|419905613|ref|ZP_14424570.1| exonuclease I, partial [Escherichia coli O26:H11 str. CVM10026]
gi|388380965|gb|EIL43545.1| exonuclease I, partial [Escherichia coli O26:H11 str. CVM10026]
Length = 381
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 151/273 (55%), Gaps = 13/273 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R K ++A I P +P +++
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSG 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K ++
Sbjct: 235 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNA 294
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---I 235
+P+ ++H+N+ P V++ L R + N+K + N + +K I
Sbjct: 295 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAI 350
Query: 236 FLDYK-INNSDLELNIDEELYNNFISKKDNLKL 267
F++ + SD N+D +LYN F S D +
Sbjct: 351 FVEAEPFTPSD---NVDAQLYNGFFSDADRAAM 380
>gi|422618050|ref|ZP_16686749.1| exonuclease I, partial [Pseudomonas syringae pv. japonica str.
M301072]
gi|330898429|gb|EGH29848.1| exonuclease I, partial [Pseudomonas syringae pv. japonica str.
M301072]
Length = 307
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 127/202 (62%), Gaps = 7/202 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY REW+ SRWDLI+V++A Y L P GI WP + +G+ + KLE L+ N +
Sbjct: 110 FYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGIVWP-EQDGRVTLKLERLTAANGI 168
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H +AHDALSDVRAT+ LARLIR P+L++++L+LR K+ V ++ + +P +I+
Sbjct: 169 DHGQAHDALSDVRATIALARLIREKQPKLYDYLLALRSKQKVQEQVR--LMQPLVHISGR 226
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED-- 179
FS+ +Y+ ++ P+ HP N+N LI +L D L ++ L + ++ +
Sbjct: 227 FSAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGEL 286
Query: 180 -IPISMIHLNRSPIVISNLKVL 200
+P+ ++H+NR P VI+ L VL
Sbjct: 287 PVPLKLLHINRCP-VIAPLGVL 307
>gi|33519912|ref|NP_878744.1| exonuclease I [Candidatus Blochmannia floridanus]
gi|33504257|emb|CAD83520.1| exodeoxyribonuclease I [Candidatus Blochmannia floridanus]
Length = 501
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 196/356 (55%), Gaps = 25/356 (7%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY+ + + SRWDL+ V++AFY L P GI WP + K SF+L L+ N+
Sbjct: 114 IFYRNFYDPYKWSYHHGNSRWDLLPVLRAFYSLYPTGIQWPINSKKKVSFRLTDLTLANS 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA SD+ ATL + +LI+ P+LF F+ + R K + I +P +I++
Sbjct: 174 IQHLNAHDATSDIFATLEIMKLIKYTQPQLFQFLYNHRTKNQLQKIINLNSMKPLIHISN 233
Query: 121 MFSSKH-SYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS---- 175
++K+ ++I + PI +HP N N+LIT+NLL+ K +L ++N Y K N
Sbjct: 234 KINNKYNNFIHFLLPITLHPNNHNVLITYNLLN--KLDILWNLNINTLYQNIKDNQQCIY 291
Query: 176 -FKEDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAF----KNIKCASSILNNTY 230
+ IP+ +I LN PI I + +N +F+Y +L + KN+ +N T+
Sbjct: 292 NLLKQIPLQLIRLNSCPIFIPITVLQENNNIFKYTSELLSDYQNHLKNLHEIKQKINYTH 351
Query: 231 IWKKIFLDYKINNS-------DLELNIDEELYNNFISKKDNLKLAILRSMSP-KKLS--N 280
+ +KI Y I S L ++D +LYN F D + +R+++ +KLS +
Sbjct: 352 LQQKIKSFYVIIESYLNKIKNKLSTHVDNQLYNGFFQYSDCRIIKQIRNITDVQKLSTIH 411
Query: 281 VNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNK---KNNLYNIN 333
+N + +L+ L+F YR+RNF TL+ +E K W Y+ + N+ KN L++IN
Sbjct: 412 INSNSNDNRLKSLLFFYRSRNFPHTLNSEEKKIWTTYKKNMLLNQDKYKNYLHHIN 467
>gi|71892235|ref|YP_277968.1| exonuclease I [Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796341|gb|AAZ41092.1| exonuclease I [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 500
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 177/339 (52%), Gaps = 15/339 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY ++ SRWDL++V++A Y L P GITWP KPSF+L+ L+ N
Sbjct: 116 IFYRNFHDPYLWAYQRGNSRWDLLHVLRACYSLCPNGITWPLNIQNKPSFRLKDLTQANA 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV ATL L +LI+ P+LF F+ R K + I P +I +
Sbjct: 176 IKHLSAHDAMSDVYATLELTKLIKEAQPQLFQFLFDHRTKYQLQKIIDLDTMNPLIFIMN 235
Query: 121 MFSSKH-SYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE- 178
++K+ ++I+ + PI HP+N NILI +L + + +IN I L + +
Sbjct: 236 KINNKYKNFITYIAPISRHPINPNILIACDLNGNIDNLVNLNINTIYQKLYSNHITIYDI 295
Query: 179 --DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAF----KNIKCASSILNNTYIW 232
IP+ I LN PI+I +N+ Y L+ + KN+ N+ Y+
Sbjct: 296 LKKIPLRFIRLNACPILIPINFFEKNNINTTYTMQLSTNYRYCLKNLNFIRMHENSVYLR 355
Query: 233 KKIFLDYKINNSDL-------ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCF 285
KI Y I S + L++D +LY+ + D + +R K+L N+
Sbjct: 356 NKINTLYTIIGSYINQKNIYNNLHVDSQLYHRLFNNSDRKIIESIRRTHSKELKNLCTDH 415
Query: 286 ENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYN 324
+ +L+ L+F YRARNF TL+Y+E K+W Y+ ++ +N
Sbjct: 416 VDTRLKPLLFYYRARNFPNTLNYQEQKKWLNYKKNKLFN 454
>gi|221134294|ref|ZP_03560599.1| exodeoxyribonuclease I [Glaciecola sp. HTCC2999]
Length = 488
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 189/374 (50%), Gaps = 14/374 (3%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN ++PY+RE+ + SRWDLIN+++A Y L P GI WP +NG SFKLE L+ N +
Sbjct: 113 FFRNFMDPYQREYLHGNSRWDLINLVRACYALRPEGIKWPLGDNGLVSFKLERLTQENGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
SH AHDALSDV AT+ +A+LI+ P+LF + LR K+ V+ + +P +I
Sbjct: 173 SHTNAHDALSDVHATIAIAQLIQQQQPKLFAYAYQLRSKQAVIRILEQHHGQPLIFINPY 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFL---LNDINKIRDYLCFKKNSFKE 178
S+K +S++ P+C HP+NKN + +L D + L+ + +I+ ++N
Sbjct: 233 RSAKFGCVSIIMPMCPHPVNKNATVCIDLTKDIFPLINEDLDTLQRIQFLPKAQRNEETP 292
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
DI +I N+ P ++ +K LS + DLN + ++ I + + + +
Sbjct: 293 DIATIVIKHNQCPF-LAPIKTLSQSRSEALNIDLNKVDQQVEHLKHICQDQESYANLIMT 351
Query: 239 YKINNS---DLE---LNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLE 291
NS D E +++ LY F++ + + SP +L N+ + +++
Sbjct: 352 LTQLNSQTYDAEKPATDVEASLYTGGFMNDAEKQFCQQVHMASPNELVNLKNNTPSPRID 411
Query: 292 ELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
EL + ARNF++TLS +W R N L + F + IE L N T
Sbjct: 412 ELFQRFIARNFLDTLSTDLQSQWYVDCQRRLTNNTQKLTLMRYFEI-IEELKSTENLSST 470
Query: 352 K--ILNALLMYGKS 363
+ +L L YGK
Sbjct: 471 QLYLLEELTKYGKE 484
>gi|84387297|ref|ZP_00990317.1| exonuclease I, partial [Vibrio splendidus 12B01]
gi|84377746|gb|EAP94609.1| exonuclease I [Vibrio splendidus 12B01]
Length = 351
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 128/220 (58%), Gaps = 4/220 (1%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W+N SRWDL++V++A + L P GI WP G PSFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQNGNSRWDLLDVMRAVHALRPDGINWPPNEEGYPSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H+ AHDA++DV AT+ LA+ ++ P++F+++ ++R K+ + + P +++ MF
Sbjct: 175 HENAHDAMADVIATIELAKKLKAAQPKMFDYLYNMRHKRKLNDLVDIVNMTPLMHVSGMF 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+Y S + P+ HP N+N +I +L DP L D +++RD L K++ ED
Sbjct: 235 GRDCNYTSWIVPMAWHPTNQNAVIVVDLAKDPSPLLELDADELRDRLYTKRSELGEDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNI 219
+PI ++ LN+ PI ++ K L++ D KN+
Sbjct: 295 VPIKLVQLNKCPI-LAPAKTLTAENAETIGIDRQQCLKNL 333
>gi|440510031|ref|YP_007347467.1| Exodeoxyribonuclease I [Candidatus Blochmannia chromaiodes str.
640]
gi|440454244|gb|AGC03736.1| Exodeoxyribonuclease I [Candidatus Blochmannia chromaiodes str.
640]
Length = 501
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 177/339 (52%), Gaps = 15/339 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY ++ SRWDL++V++A Y L P GITWP KPSF+L+ L+ N
Sbjct: 117 IFYRNFHDPYLWAYQQGNSRWDLLHVLRACYSLCPNGITWPLNIQNKPSFRLKDLTQANA 176
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA+SDV ATL L +LI+ P+LF F+ R K + I P +I +
Sbjct: 177 IKHFSAHDAMSDVYATLELTKLIKEVQPQLFQFLFDHRTKYQLQKIIDLDTMNPLIFIMN 236
Query: 121 MFSSKH-SYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE- 178
+ K+ ++I+ + PI HP+N NILI +L + + +IN I L + +
Sbjct: 237 KINYKYKNFITYIAPISRHPINPNILIACDLNGNIDNLVNLNINTIYQKLYSNHITIYDI 296
Query: 179 --DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAF----KNIKCASSILNNTYIW 232
IP+ +I LN PI+I +N+ Y L+ + KN+ N+ Y+
Sbjct: 297 LKKIPLRLIRLNACPILIPINFFEKNNINTTYTMQLSTNYRYCLKNLNFIRMHENSVYLR 356
Query: 233 KKIFLDYKINNSDL-------ELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCF 285
KI Y I S + L++D +LY+ + D + +R K+L N+
Sbjct: 357 NKINTLYTIIGSYINQKNIYNNLHVDCQLYHRLFNNSDRKIIESIRRTHSKELKNLCTDH 416
Query: 286 ENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYN 324
+ +L+ L+F YRARNF TL+Y+E K+W Y+ ++ +N
Sbjct: 417 VDTRLKPLLFYYRARNFPNTLNYQEQKKWLNYKKNKLFN 455
>gi|437842552|ref|ZP_20846838.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435296354|gb|ELO72742.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 380
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 142/264 (53%), Gaps = 13/264 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDIYPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLD 238
+P+ ++H+N+ P V++ L R + N+K + N + K+
Sbjct: 296 AVPVKLVHINKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAI 351
Query: 239 YK----INNSDLELNIDEELYNNF 258
+ SD N+D +LY+ F
Sbjct: 352 FAEAEPFAASD---NVDAQLYDGF 372
>gi|444349180|ref|ZP_21156687.1| LOW QUALITY PROTEIN: exodeoxyribonuclease I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443545255|gb|ELT55090.1| LOW QUALITY PROTEIN: exodeoxyribonuclease I [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 290
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 59 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 118
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R K+ L P P +++ M
Sbjct: 119 AHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKRR-LKSSSIPQKMPLVHVSGM 177
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ P+ HP NKN +I +L D L + ++R+ L KK +
Sbjct: 178 LGNYRGNTTLIAPLAWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGA 237
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSN 203
+P+ +IH+N+ PIV +L N
Sbjct: 238 LPVPLKLIHINKCPIVAPAKTLLPQN 263
>gi|445249783|ref|ZP_21408743.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|444889812|gb|ELY13207.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 357
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 128/232 (55%), Gaps = 23/232 (9%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHA 295
Query: 180 -IPISMIHLNRSPIV---------------------ISNLKVLSSNLMFRYK 209
+P+ ++H+N+ P++ + NLKVL N R K
Sbjct: 296 AVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVRDK 347
>gi|409250672|ref|YP_006886480.1| exonuclease I, 3'-> 5' specific [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|320086500|emb|CBY96271.1| exonuclease I, 3'-> 5' specific [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 333
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 119/195 (61%), Gaps = 2/195 (1%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED- 179
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHV 295
Query: 180 -IPISMIHLNRSPIV 193
+P+ ++H+N+ P++
Sbjct: 296 AVPVKLVHINKCPVL 310
>gi|289677836|ref|ZP_06498726.1| exonuclease I, partial [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 153/284 (53%), Gaps = 14/284 (4%)
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H +AHDALSDVRAT+ LARLIR P+L++++ +LR K+ V ++ + +P +I+ F
Sbjct: 1 HGQAHDALSDVRATIALARLIREKQPKLYDYLFALRSKQKVQEQVR--LMQPLVHISGRF 58
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
S+ +Y+ ++ P+ HP N+N LI +L D L ++ L + ++ +
Sbjct: 59 SAARNYLGVVLPLAWHPHNRNALIVCDLHLDHSPLLHEGAETLKRRLYTRHDALGDGELP 118
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIW-KKIFLD 238
+P+ ++H+NR P VI+ L VL S R + D+ A+ + +W K+
Sbjct: 119 VPLKLLHINRCP-VIAPLGVLRSEDQQRLQLDMAGYQAR---AAQLSERREVWHDKLAAV 174
Query: 239 YKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYR 298
Y ++ + +++LY+ FI +D +R P++L+ + F++ +L EL+F YR
Sbjct: 175 YGKDDFVASEDPEQQLYDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRYR 234
Query: 299 ARNFIETLSYKELKRWKKYRISRF----YNKKNNLYNINMFYLE 338
ARNF +TLS +E RW+ + R + N L++ ++E
Sbjct: 235 ARNFPDTLSGEEQTRWRDFCQQRLRSPEWGAPNTLHDFTAAWVE 278
>gi|27904977|ref|NP_778103.1| exonuclease I [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
gi|32129519|sp|Q89A43.1|EX1_BUCBP RecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; AltName:
Full=DNA deoxyribophosphodiesterase; Short=dRPase
gi|27904375|gb|AAO27208.1| exodeoxyribonuclease I [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 481
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 167/324 (51%), Gaps = 25/324 (7%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +N YE WKN SRWD++++++A YVL P GI WP + S +L +S NN
Sbjct: 115 IFYRNFLNSYEWSWKNGNSRWDMLDLLRACYVLRPEGINWPRNEDNSVSLRLSDISLANN 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A SDV AT+ +A+LI+ P+LFNF R KK +L I P YI+
Sbjct: 175 IVHNVAHNASSDVYATMNIAKLIKQKKPKLFNFFFKYRTKKAILTLIDVNSLNPIVYISR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS----- 175
F + YIS + PI HP+N NIL++ +L D +K +LN FK+NS
Sbjct: 235 FFGVVNRYISYIVPILWHPINSNILVSIDLSQDVQK-ILN---------FFKRNSILNVN 284
Query: 176 FKED--IPISMIHLNRSPIVI-SNLKVLSSNLMFR--YKFDLNCAFKNIKCASSILNNTY 230
+KE + I I++NR PI+I +N+ + + R YK N K
Sbjct: 285 YKEIFLMGIRFIYVNRCPILIPTNVIRMKDRIRLRINYKLFQNNLVLLRKNIFLKKKLKK 344
Query: 231 IWKKIFLDYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKL 290
I K N S N+D ++YN+F S DN + + S PK++ +NF + ++
Sbjct: 345 FLCSIAEAPKYNGS----NVDLKMYNSFFSYIDNNVIKNIHSTLPKRIK-INFMKYDNRI 399
Query: 291 EELIFLYRARNFIETLSYKELKRW 314
+L L+ AR + L Y E W
Sbjct: 400 NQLFILFLARYRPDMLDYSEKYFW 423
>gi|383790490|ref|YP_005475064.1| exonuclease I [Spirochaeta africana DSM 8902]
gi|383107024|gb|AFG37357.1| exonuclease I [Spirochaeta africana DSM 8902]
Length = 485
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 12/330 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PY + N SRWDLINV++ + L P GITWP +G+P FKL+HL+ N
Sbjct: 105 LFYRNFIDPYAWHYANGNSRWDLINVVRLAHDLRPDGITWPTAEDGRPLFKLDHLTAANG 164
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H+ AHDAL+DV AT+ +A+L+R+ NPRL+ F R + V + + + RP +
Sbjct: 165 IEHRGAHDALADVYATIAMAQLVRSTNPRLYQFAWDHRSRDKVRSLLDIGVRRPVLHTDG 224
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKN--SFKE 178
+ + + + + P+ ++P N +I +L +DP + ++R + + ++
Sbjct: 225 IHTRQAGCTTAVAPVGVNPENPKAVIAADLRYDPTPIIELPTEEVRRRIFTSSEILAPEQ 284
Query: 179 DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYI---WKKI 235
I ++ IH NRSP V++ + L R D+ + A + NT + ++K+
Sbjct: 285 RIHVTEIHENRSP-VLTPVAALDPESSRRLDIDIELCTER---ARMLYRNTLLIQKFQKV 340
Query: 236 FLDYKINNS--DLELNIDEELYNNFISKKDNLKL-AILRSMSPKKLSNVNFCFENKKLEE 292
+ + + D EL I ++ KL +R P +L ++ ++++
Sbjct: 341 YGERPARETPEDPELMIYGGGPFGGFFADEDKKLFEAIRHAEPGQLLSIEPKSHDQRIPV 400
Query: 293 LIFLYRARNFIETLSYKELKRWKKYRISRF 322
L Y RN E L E R++ + R
Sbjct: 401 LFRRYVWRNAWEALDQAERDRYRAFCAKRL 430
>gi|424586117|ref|ZP_18025707.1| exodeoxyribonuclease I, partial [Vibrio cholerae CP1030(3)]
gi|395976071|gb|EJH85534.1| exodeoxyribonuclease I, partial [Vibrio cholerae CP1030(3)]
Length = 374
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 139/262 (53%), Gaps = 8/262 (3%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDY 239
+P+ ++HLN+ PI ++ K L++ + D ++ I + I +K+ +
Sbjct: 295 VPVKLVHLNKCPI-LAPAKTLTAENAQKIGIDREQCLAHLNV---IRQHPEIREKLVTVF 350
Query: 240 KINNS-DLELNIDEELYNNFIS 260
+ E ++D +LY F S
Sbjct: 351 SQEREFNQESDVDSQLYAGFFS 372
>gi|444334772|ref|ZP_21150228.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443549928|gb|ELT58481.1| exodeoxyribonuclease I [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 345
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 113 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 172
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 173 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 232
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--- 178
+ +L+ + HP NKN +I +L + L + ++ + L KK +
Sbjct: 233 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELCENLYTKKETLLAAGA 292
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSN 203
+P+ +IH+N+ PIV +L N
Sbjct: 293 LPVPLKLIHINKCPIVAPAKTLLPQN 318
>gi|116515281|ref|YP_802910.1| SbcB [Buchnera aphidicola BCc]
gi|116257135|gb|ABJ90817.1| exodeoxyribonuclease I [Buchnera aphidicola BCc]
Length = 475
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 171/320 (53%), Gaps = 13/320 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RNL +PYE WKNN WD++N+++AFY+ P + W Y +NG SFKL ++ VNN
Sbjct: 114 IFYRNLFDPYEWSWKNNNFSWDILNILRAFYIFLPKSMCWYYNSNGTVSFKLSDITLVNN 173
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H HDA SDV AT + + + + F ++ + KKKY+ + + I +PFFYI+
Sbjct: 174 IKHIHIHDAYSDVYATFLITKYLFSKYKNFFLYLYMISKKKYISSFLLNNINKPFFYISS 233
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
F S + + I +HP+ KN ++ ++L D KK + N K L K F ++
Sbjct: 234 FFGSINYNFGCIMYIGLHPLYKNNIVIFDLSSDFKK-IFNLYKKYSTCLISIKKLF--NV 290
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSIL---NNTYIWKKIFL 237
I ++ +++SP+ S +++ ++ LN + +KC + NN I I
Sbjct: 291 GIKVVSISKSPLFFS-----YNSVSLKHCIRLNIDY--LKCQKNFFLLKNNFLIKNWIIS 343
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ + +ID LYNNF D L+ + PKK + F + ++++L F
Sbjct: 344 CFSYKKKEKINDIDLMLYNNFFLNSDRCLLSFIHKNEPKKWMGWSANFLDNRIKKLFFRL 403
Query: 298 RARNFIETLSYKELKRWKKY 317
+ARNFI+ L++ E+K+W+ Y
Sbjct: 404 KARNFIKLLNFNEIKKWQFY 423
>gi|424656371|ref|ZP_18093669.1| exodeoxyribonuclease I, partial [Vibrio cholerae HC-81A2]
gi|408055680|gb|EKG90596.1| exodeoxyribonuclease I, partial [Vibrio cholerae HC-81A2]
Length = 354
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 3 WRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLS 62
+RN I+PY W++ SRWDL++V++A + L P GI WP ++G SFKLEHLS N +
Sbjct: 115 YRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIE 174
Query: 63 HKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMF 122
H AHDA++DV AT+ LA+ ++ P+LF++ ++R K+ + I P +++ M
Sbjct: 175 HSNAHDAMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGML 234
Query: 123 SSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--- 179
+ Y S + PI HP N+N +I +L DP+ L D ++ L + D
Sbjct: 235 GRERHYTSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELP 294
Query: 180 IPISMIHLNRSPIVISNLKVLSSN 203
+P+ ++HLN+ PI+ + + N
Sbjct: 295 VPVKLVHLNKCPILAPAKTLTAEN 318
>gi|384226345|ref|YP_005617508.1| exonuclease I [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
gi|311086852|gb|ADP66933.1| exonuclease I [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
Length = 412
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 143/262 (54%), Gaps = 14/262 (5%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PYE WKN SRWD++N+++A Y L P GI WP G SFKL L+ NN
Sbjct: 142 IFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNN 201
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+A+SDV AT+ +A+L++ PRLF+F +RKK + I +P YI+
Sbjct: 202 IVHLNAHNAVSDVYATIEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISA 261
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
F + + +S + PI H N NILI +L D K L+N KI CF K
Sbjct: 262 YFGAIYHNMSCILPIAWHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLL 316
Query: 179 DIPISMIHLNRSPIV--ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
D + ++HLNR PI+ I ++ N + ++F LN + IK + N K IF
Sbjct: 317 DSGVVLLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNI---KIIF 373
Query: 237 LDYKINNSDLELNIDEELYNNF 258
K NN++ N+D E+YN F
Sbjct: 374 --SKNNNTNQFFNVDLEIYNGF 393
>gi|436718147|ref|ZP_20518917.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434985105|gb|ELL76798.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
Length = 297
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 107/178 (60%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE 178
MF + S + P+ HP N+N +I +L D L D + +R+ L K +
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGD 293
>gi|319760584|ref|YP_004124522.1| exodeoxyribonuclease I [Candidatus Blochmannia vafer str. BVAF]
gi|318039298|gb|ADV33848.1| exodeoxyribonuclease I [Candidatus Blochmannia vafer str. BVAF]
Length = 491
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 175/332 (52%), Gaps = 16/332 (4%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN +PY + + SRWDL+ +++A+Y L P I WP N K SF+L L++ N++
Sbjct: 115 FYRNFCDPYLWAYNHGNSRWDLLPILRAYYSLYPEKIYWPINNKNKISFRLIDLTYANHI 174
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H HDA+SDV ATL + +L + +P F F+ + R K + I + P +I++
Sbjct: 175 EHLNVHDAMSDVYATLEIMKLTQKTHPYFFQFLYNHRTKDQLKKIINFDFIDPLIFISNT 234
Query: 122 FSSKH-SYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE-- 178
+ + ++I + PI HP NKNILI ++L P L +INK+ L + +
Sbjct: 235 INDTYNNFIKFLAPISWHPNNKNILIAYDLNSKPDLLLNLNINKLYQNLYQGTQNLSDLF 294
Query: 179 -DIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDL----NCAFKNIKCASSILNNTYIWK 233
IP+ +I LN PI+I + ++ +F YK L KN+ + +N+TY+
Sbjct: 295 KQIPLQLIKLNSCPILIP-IHLIKKENIFYYKNSLFSYYQYCLKNLNFIQTNINHTYLKN 353
Query: 234 KIFLDY-------KINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFE 286
KI Y K+ + ++++D +LY F + D + +R+ + ++LS +
Sbjct: 354 KIKTFYTTIESYFKLKQTYQKVHVDNQLYFKFFNFSDRQLINKIRNTNIQQLSKIKINST 413
Query: 287 NKKLEELIFLYRARNFIETLSYKELKRWKKYR 318
+ +L+ L F Y+ARNF +L+ KE K W Y+
Sbjct: 414 DTRLKLLFFFYKARNFPYSLNVKEQKSWLDYK 445
>gi|437238611|ref|ZP_20714186.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435183929|gb|ELN68882.1| exonuclease I, partial [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
Length = 292
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKK 173
MF + S + P+ HP N+N +I +L D L D + +R+ L K
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAK 288
>gi|148244981|ref|YP_001219675.1| exodeoxyribonuclease I [Candidatus Vesicomyosocius okutanii HA]
gi|146326808|dbj|BAF61951.1| exodeoxyribonuclease I [Candidatus Vesicomyosocius okutanii HA]
Length = 473
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 192/373 (51%), Gaps = 20/373 (5%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLS-PYGITWPYKNNGKPSFKLEHLSFVNN 60
+RN I+PY WKN +RWD+++V++ Y L + W Y K FKL+ LS NN
Sbjct: 108 LYRNFIDPYTWHWKNGNTRWDILDVVRLCYALKKDTSLKWVYDEQNKVIFKLDQLSLANN 167
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AH+AL+DV AT+ +A++I+ P+LFN+ SLRKKK + +I + P + +
Sbjct: 168 IEHTYAHNALADVYATIAIAKIIKKTQPQLFNYAFSLRKKKTIKEKIK--LFEPMLHTSR 225
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK--- 177
++S+ S L + H + + + +NL DP L +I ++ + K N
Sbjct: 226 VYSATLSCTRLSVALAYHSYHDRVFV-FNLDQDPCILLELNIKTLKTLMFTKNNQSALSK 284
Query: 178 --EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKI 235
+ + I + N+SP+ + N+ L S ++ + K D++ + ++ I N I K+
Sbjct: 285 EMKGLQIKELIFNKSPMFVPNVYKLESKIIKQLKIDMSTCLQRLEF---IKKNQVIISKV 341
Query: 236 FLDYKINNSDLE--LNIDEELYNNFISKKDNLKLAI---LRSMSPKKLSNVNFCFENKKL 290
D N+ + ++D+ LY++FI+ DN I ++++S +L N + F++ +L
Sbjct: 342 VQDLYRNDQQRQPSSDVDQALYDDFIN--DNTDKHICNQIQTLSTNELKNFHPKFKDNRL 399
Query: 291 EELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHD 350
+L+ ++ARN+ L+ E + W K R KN I+ + I ++++K + +
Sbjct: 400 SKLLIHFKARNYPNILTENEKEEWFKTVQERVQTGKNGYTTIDDYLARI-NIIRKQHPNQ 458
Query: 351 TKILNALLMYGKS 363
K+ L Y KS
Sbjct: 459 EKLWKQLETYSKS 471
>gi|213621019|ref|ZP_03373802.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
Length = 275
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 98/153 (64%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHD 153
MF + S + P+ HP N+N +I +L D
Sbjct: 236 MFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGD 268
>gi|303256767|ref|ZP_07342781.1| exodeoxyribonuclease I [Burkholderiales bacterium 1_1_47]
gi|330999116|ref|ZP_08322837.1| exonuclease [Parasutterella excrementihominis YIT 11859]
gi|302860258|gb|EFL83335.1| exodeoxyribonuclease I [Burkholderiales bacterium 1_1_47]
gi|329575505|gb|EGG57044.1| exonuclease [Parasutterella excrementihominis YIT 11859]
Length = 494
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 177/372 (47%), Gaps = 16/372 (4%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
MFWRNL+ Y+ E+ R+D+ ++ A Y ++P + WP K +G FKL+ L+ NN
Sbjct: 117 MFWRNLLPAYDTEYGEGRGRFDVFLLVIAVYAVAPQILNWPTKEDGTVCFKLDRLTPANN 176
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
L H+ AHDA SD ATL LA+LI + NPRL+ + LS+ K ++ + RP Y+
Sbjct: 177 LPHRHAHDASSDAFATLQLAKLIASKNPRLWEYALSISKSDKIVELLN--EKRPLLYVDR 234
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKF--LLNDINKIRDYLC-FKKNSFK 177
+ + P+ +P +N I W+L DP + + K R ++ +K
Sbjct: 235 YSLHHRRGLRPVMPLFENPSVRNEWICWDLSADPNEMWAITEKDMKERSFVTREQKEQGI 294
Query: 178 EDIPISMIHLNRSPIVISNLKV-LSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIF 236
+ +P I + P ++ + V ++ N + F+ A+ + + + + + + +
Sbjct: 295 KPLPFVRIKTKKQPFLMKGMSVWITKN--GQGLFEHPAAYYSENASKILASADRLSELLS 352
Query: 237 LDYKINNSDLELNI----DEELY-NNFISKKDNLKLAILRSMSPKKLSNV--NFCFENKK 289
L + + E + +E LY F S D K+A R++ P+++++ F+ +
Sbjct: 353 LFMALADRKAEEHAKDIPEEALYSGGFPSNSDARKMATFRALPPEEMADAFDRLEFDRED 412
Query: 290 LEELIFLYRARNFIETLSYKELKR-WKKYRISRFYNKKNNLYNINMFYLEIESLLKKANE 348
L EL + RN+ E E +R W+ ++ ++ FY E+E + A+E
Sbjct: 413 LAELTLYFMGRNYPEYALTPETERLWRLHKYNKLVKGLGGARTFTQFYEELEEVRAGADE 472
Query: 349 HDTKILNALLMY 360
H +IL + Y
Sbjct: 473 HGLEILEDVEGY 484
>gi|416055227|ref|ZP_11579359.1| LOW QUALITY PROTEIN: exodeoxyribonuclease I [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348003257|gb|EGY43903.1| LOW QUALITY PROTEIN: exodeoxyribonuclease I [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 297
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI WP + G PSF+LE L+ N +
Sbjct: 114 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGI 173
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
+H AHDA+SDV AT+ +A+LI+ P+LF + R KK V I P +++ M
Sbjct: 174 AHDNAHDAMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGM 233
Query: 122 FSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSF 176
+ +L+ + HP NKN +I +L + L + ++ + L KK +
Sbjct: 234 LGNYRGNTTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELCENLYTKKRPY 288
>gi|398796779|ref|ZP_10556227.1| exonuclease I, partial [Pantoea sp. YR343]
gi|398202477|gb|EJM89320.1| exonuclease I, partial [Pantoea sp. YR343]
Length = 241
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 87/130 (66%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+N SRWDL++V++A Y L P GI WP ++G PSFKLEHL+ N
Sbjct: 112 IFYRNFFDPYGWSWQNGNSRWDLLDVMRACYALRPEGIEWPENDDGFPSFKLEHLTRANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H++AHDA+SDV ATL +A+L++ P+LF F+ + R K+ ++ I P +P +++
Sbjct: 172 VAHEQAHDAMSDVYATLAMAKLVQEKQPKLFEFLFTHRNKQKLMTLIDIPQMKPLVHVSG 231
Query: 121 MFSSKHSYIS 130
MF + S
Sbjct: 232 MFGAARGNTS 241
>gi|378823519|ref|ZP_09846143.1| putative exodeoxyribonuclease I, partial [Sutterella parvirubra YIT
11816]
gi|378597665|gb|EHY30929.1| putative exodeoxyribonuclease I, partial [Sutterella parvirubra YIT
11816]
Length = 380
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 25/273 (9%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPS----------- 49
+FWRN ++PY WK+ CSRWDL ++ A + L GI WP P
Sbjct: 114 LFWRNFLDPYSHGWKDGCSRWDLFPLVCAVWALRGDGIRWPLWEELDPERFPQAAVRKGV 173
Query: 50 -FKLEHLSFVNNLSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIG 108
KLE L+ N ++H +AH+ALSDV AT+GLARLIR P+L+++ L+ R K+ V A +
Sbjct: 174 CMKLECLTEANGITHGQAHEALSDVEATIGLARLIREKEPKLWDWALANRSKEQVRAAL- 232
Query: 109 WPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDY 168
P +++ L + N N ++ W+L DP +I +
Sbjct: 233 --EKGPVVWVSPKIGVARGCTMLG---GMLYANGNDVLMWDLREDPSVLRTLSREEIIER 287
Query: 169 LCFKKNSFKEDI---PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSI 225
+ ++ E + P+ + +N SP V L VLS + RY D A + + ++
Sbjct: 288 ITTPQSKLPEGVTRLPVRKMKINASPFVCGALGVLSPDRAARYGIDRAAAVERYQ---AL 344
Query: 226 LNNTYIWKKIFLDYKINNSDLE-LNIDEELYNN 257
L + + I + + LE +++D LY+
Sbjct: 345 LEVRPLVEGILAECMEHGGGLEPVDVDAALYDG 377
>gi|429743375|ref|ZP_19276938.1| exodeoxyribonuclease I domain protein [Neisseria sp. oral taxon 020
str. F0370]
gi|429165637|gb|EKY07677.1| exodeoxyribonuclease I domain protein [Neisseria sp. oral taxon 020
str. F0370]
Length = 255
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 87/143 (60%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN I+PYE +KN SRWDL++V++A Y L P GI WP ++G P FKLE L+ N
Sbjct: 112 LFYRNFIDPYEYSYKNGNSRWDLLDVVRACYALRPEGIEWPRDSDGLPVFKLEQLTAANG 171
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
++H+ AHDA+SDV AT+ A+LI+ PRLF + K+ + A I P +++
Sbjct: 172 IAHEHAHDAMSDVYATIETAKLIKQKQPRLFQYFFEHHSKEALKAMIDTQGLTPLVHVSG 231
Query: 121 MFSSKHSYISLMWPICIHPMNKN 143
MF ++ +L+ P+ HP
Sbjct: 232 MFGNRRGNTALIAPLAWHPTTPT 254
>gi|437373314|ref|ZP_20749592.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435205780|gb|ELN89356.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
Length = 242
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 83/122 (68%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSG 235
Query: 121 MF 122
MF
Sbjct: 236 MF 237
>gi|226330550|ref|ZP_03806068.1| hypothetical protein PROPEN_04468 [Proteus penneri ATCC 35198]
gi|225201345|gb|EEG83699.1| exonuclease domain protein [Proteus penneri ATCC 35198]
Length = 274
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 90 LFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWN 149
+F++ +LR K+ V A I P P +++ MF + S +SL+ P+ HP N+N +I +
Sbjct: 1 MFDYFFNLRDKRKVQALIDIPAMTPIVHVSGMFGAARSNLSLVAPLAWHPDNRNAVIVCD 60
Query: 150 LLHDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSPIVISNLKVLSSNLMF 206
L D L +++R+ L ++ D +PI ++H+N+ PIV L
Sbjct: 61 LSADISPLLTLTSDQLRERLYTPRSELAVDEPPVPIKLLHINKCPIVAPQ-NTLRPQDAD 119
Query: 207 RYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYKINNSDLEL-----------NIDEELY 255
R D++ + LNN I +F +I N +EL ++D ++Y
Sbjct: 120 RIGLDVD----------TCLNNQAI---LFSHPEIRNKVVELFAQQTPFVVSDDVDSQIY 166
Query: 256 NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWK 315
N F S+ D + I+RS P+ L ++ FE+ ++E L F YRARN+ TL+Y E +RW
Sbjct: 167 NGFFSENDRSAMEIIRSTQPQNLPALDLTFEDARMEPLFFRYRARNYPSTLNYDEQQRWL 226
Query: 316 KYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTKILNALLMYGKSIT 365
+R +K N Y IN L E NE K L L +Y + I
Sbjct: 227 AHRKEMLTPEKLNEY-INTIQLLAEKY--SDNEEKLKQLQELYLYAQDIA 273
>gi|437675126|ref|ZP_20816697.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435277831|gb|ELO55762.1| exonuclease I [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
Length = 292
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 13/255 (5%)
Query: 70 LSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYI 129
++DV AT+ +A+L++ PRLF+++ S R K + A I P +P +++ MF +
Sbjct: 1 MADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNT 60
Query: 130 SLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIHL 187
S + P+ HP N+N +I +L D L D + +R+ L K + +P+ ++H+
Sbjct: 61 SWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVKLVHI 120
Query: 188 NRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKK---IFLDYK-INN 243
N+ P V++ L R + N+K + N + K IF + +
Sbjct: 121 NKCP-VLAQANTLRPEDADRLGINRQHCLDNLKV---LRENPQVRDKVVAIFAEAEPFAA 176
Query: 244 SDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFI 303
SD N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F YRARNF
Sbjct: 177 SD---NVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFP 233
Query: 304 ETLSYKELKRWKKYR 318
TL E +RW ++R
Sbjct: 234 GTLDDAEQQRWLEHR 248
>gi|429110894|ref|ZP_19172664.1| Exodeoxyribonuclease I [Cronobacter malonaticus 507]
gi|426312051|emb|CCJ98777.1| Exodeoxyribonuclease I [Cronobacter malonaticus 507]
Length = 290
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 146/298 (48%), Gaps = 20/298 (6%)
Query: 75 ATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWP 134
AT+ +A+L++ PR+F+++ + R K+ + I +P +++ MF + S + P
Sbjct: 3 ATIAMAQLVKTRQPRMFDYLYTYRSKQKLATLIDTVQMKPLVHVSGMFGAWRGNTSWIAP 62
Query: 135 ICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--IPISMIHLNRSPI 192
+ HP N+N +I +L D L + + +R+ L K + E +P+ ++HLN+ P
Sbjct: 63 VAWHPENRNAVIVVDLAGDISPLLELNADDLRERLYTPKAALGEASAVPVKLVHLNKCP- 121
Query: 193 VISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK----INNSDLEL 248
V++ L R D N+K + ++ + +K+ + +D
Sbjct: 122 VLAQANTLRPEDAERLGIDRQHCLNNLKV---LRDSPQVREKLVTLFAEAPPFPPTD--- 175
Query: 249 NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSY 308
N+D +LY+ F S D + I+ P+ L ++ F +K++E+L+F YRARNF TLS
Sbjct: 176 NVDAQLYDGFFSDADRAAMRIVLETPPQNLPALDITFVDKRIEKLLFNYRARNFPGTLSE 235
Query: 309 KELKRWKKYRISRFYNKKNNLY--NINMFYLEIESLLKKANEHDTKILNALLMYGKSI 364
+E +RW +R F + Y + M Y + ES ++ T +L AL Y + I
Sbjct: 236 QEQERWLTHRRDVFTPEFLQAYAQELEMLYNQYES-----DKEKTALLKALYQYAQEI 288
>gi|60326832|gb|AAX18929.1| putative exonuclease I, partial [Pseudomonas protegens]
Length = 278
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 11/282 (3%)
Query: 92 NFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILITWNLL 151
+++ LR K+ V+ ++ + +P +I+ FS+ YI ++ P+ HP N+N LI +L
Sbjct: 1 DWLFQLRSKQRVMDQVR--LLQPMVHISGRFSAARHYIGVILPLAWHPRNRNALIVCDLH 58
Query: 152 HDPKKFLLNDINKIRDYLCFKKNSFKED---IPISMIHLNRSPIVISNLKVLSSNLMFRY 208
DP+ L D +R L ++ E +P+ +IH+NR P+V + L VL S R
Sbjct: 59 LDPQGLLELDAETLRQRLYTRREDLLEGELPVPLKLIHINRCPVV-APLSVLRSEDQQRL 117
Query: 209 KFDLNCAFKNIKCASSILNNTYIWK-KIFLDYKINNSDLELNIDEELYNNFISKKDNLKL 267
D+ + A ++ +W+ K+ + Y + + +++LY+ FI+ +D
Sbjct: 118 HLDMELYQRR---AVALSEAQEVWRDKLSVIYGPDEFAASDDPEQQLYDGFIADRDRRLC 174
Query: 268 AILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKN 327
+R P L+ + F++++L EL+F YRARNF ETL+ E +RW + R + +
Sbjct: 175 EQVREADPLHLAQQQWPFDDERLPELLFRYRARNFPETLNKAEQERWLVFCQQRLLDPQL 234
Query: 328 NLYN-INMFYLEIESLLKKANEHDTKILNALLMYGKSITQKI 368
N + F +E L A+ ++L+ Y +++T+++
Sbjct: 235 GAPNTLESFRQGLEQSLLSADPVQRQVLDQWQDYVQALTRRL 276
>gi|384081977|ref|ZP_09993152.1| exonuclease I [gamma proteobacterium HIMB30]
Length = 485
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 175/373 (46%), Gaps = 13/373 (3%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+R L +PY ++ + R+DL V+ A++VL+P I WP ++G+P FKL+ + +N
Sbjct: 106 IFYRCLRDPYAWQYADGRGRFDLYPVVLAYFVLAPEAIRWPEDHDGRPRFKLDRIGPLNQ 165
Query: 61 LSH--KKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEI-GWPIARPFFY 117
L K+AHDA SDV T LAR + ++P LF L K +V +I +
Sbjct: 166 LDRGLKRAHDASSDVAVTARLARQLALHDPDLFATCLKRIDKHFVTDQIRADGRSEGLLE 225
Query: 118 ITHMFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFK 177
+T ++ +W N + ++L +DP++ + N I + ++ + K
Sbjct: 226 VTSFAGWDQGFVRDLWIPFRLSERSNDYVAFDLNYDPQQVMTNLIGLVENHSIDRSELRK 285
Query: 178 E--DIPISMIHLNRSPIVI--SNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWK 233
+ + I I +N P++ + L+ + + + + D +N+ I + +
Sbjct: 286 QVRALGIHTIRINAQPMLFRRATLEPHTKSRLEAFGRDEVRQNQNLDVWQHIQESPAFKQ 345
Query: 234 KIFLDYKI---NNSDLELNIDEELY-NNFISKKDNLKLAILRSMSPKKLSNVNFCFENKK 289
L ++ L ++D LY NF+S D LA L M P+ LS F++ +
Sbjct: 346 LYRLAVQVLAETEQALPDDVDFGLYAGNFLSTHDKDLLASLPLMDPESLSQWTQSFDDPR 405
Query: 290 LEELIFLYRARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKAN-- 347
+ L+F YRARNF ++L+ E K W+K R + + + E+ ++ ++ +
Sbjct: 406 YDTLLFRYRARNFPQSLTQSEWKLWQKTRREKLMGVHSTKTQASRVQDELVAISQRTDLE 465
Query: 348 EHDTKILNALLMY 360
H + L +M+
Sbjct: 466 PHQIEQLEQFVMW 478
>gi|145629537|ref|ZP_01785335.1| exodeoxyribonuclease I [Haemophilus influenzae 22.1-21]
gi|144978380|gb|EDJ88144.1| exodeoxyribonuclease I [Haemophilus influenzae 22.1-21]
Length = 244
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 2 FWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNL 61
F+RN I+PYE WKN SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N +
Sbjct: 112 FYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGI 171
Query: 62 SHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHM 121
H+ AHDA++DV AT+ +A+LI+ P+LF + R KK + + P +++ M
Sbjct: 172 EHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGSMTPLVHVSGM 231
Query: 122 FS 123
Sbjct: 232 LG 233
>gi|213850284|ref|ZP_03381182.1| exonuclease I [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
Length = 225
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 116 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTQANG 175
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWP 110
+ H AHDA++DV AT+ +A+L++ PRLF+++ S R K + A I P
Sbjct: 176 IEHSNAHDAMADVYATIAMAQLVKTRQPRLFDYLYSHRSKHKLAALIDVP 225
>gi|134082476|emb|CAK97283.1| unnamed protein product [Aspergillus niger]
Length = 298
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 71/98 (72%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 200 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 259
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLR 98
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R
Sbjct: 260 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHR 297
>gi|415923245|ref|ZP_11554756.1| Exodeoxyribonuclease I [Herbaspirillum frisingense GSF30]
gi|407760529|gb|EKF69795.1| Exodeoxyribonuclease I [Herbaspirillum frisingense GSF30]
Length = 201
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Query: 178 EDIPISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFL 237
E +P+ IHLN+SP+V+ +LK LS+ D++ A ++ + A+++ + + +W++++
Sbjct: 13 ERLPVKSIHLNKSPMVVGSLKTLSAERAAALGIDVDTALRHAEHAAALPDLSSLWRQVYQ 72
Query: 238 DYKINNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLY 297
+ D +DE+LY FI D +L LR+++P L+ + F++ +L E++F Y
Sbjct: 73 REGEDRPD----VDEDLYGGFIGNGDRRQLTQLRALAPAALAEASMSFDDMRLNEILFRY 128
Query: 298 RARNFIETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLKKANEHDTK-ILNA 356
RARNF ETL E + W+++R +R + I + +I+ L ++A++ T+ IL A
Sbjct: 129 RARNFPETLRPDEAQHWEEHRAARLFEGAGGARTIAQLFEQIDQLQEQADDERTQDILGA 188
Query: 357 LLMYGKSIT 365
L Y + I
Sbjct: 189 LYDYAEMIA 197
>gi|297519534|ref|ZP_06937920.1| exonuclease I [Escherichia coli OP50]
Length = 213
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 71/98 (72%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 115 VFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 174
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLR 98
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R
Sbjct: 175 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHR 212
>gi|317035770|ref|XP_001396951.2| hypothetical protein ANI_1_1434134 [Aspergillus niger CBS 513.88]
Length = 177
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 71/98 (72%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+F+RN +PY W+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N
Sbjct: 80 IFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANG 139
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLR 98
+ H AHDA++DV AT+ +A+L++ PRLF+++ + R
Sbjct: 140 IEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHR 177
>gi|307069516|ref|YP_003877993.1| putative exonuclease I [Candidatus Zinderia insecticola CARI]
gi|306482776|gb|ADM89647.1| putative exonuclease I [Candidatus Zinderia insecticola CARI]
Length = 471
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 196/373 (52%), Gaps = 30/373 (8%)
Query: 1 MFWRNLINPYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNN 60
+FWRNL+NPYEREWKN CS +D N+IK Y ++ + W K N K SFKL +S +N
Sbjct: 110 LFWRNLLNPYEREWKNKCSTYDFFNIIKIIYFINYNSLKWFKKKNKKISFKLSDISKING 169
Query: 61 LSHKKAHDALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITH 120
+K H+AL DV ATL A++I+ N +LF + LR KK ++ I + + F Y+++
Sbjct: 170 YLNKFFHNALFDVNATLFCAKIIKKKNFKLFYKFIKLRNKKNIIKNILFK-KKVFLYLSN 228
Query: 121 MFSSKHSYISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKEDI 180
+ I ++ P+ I NKN LI N+ + F K N K +
Sbjct: 229 KYPFFEKEIFILLPLFIDNKNKNKLICLNINSNFNNFFDFKK---------KYNFKKINN 279
Query: 181 PISMIHLNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTY-----IWKKI 235
I +I++N+ PI+ N+K + + F+ F+L IK + +NN I+KK
Sbjct: 280 YIKIININKYPIIFFNIKKILKKINFKINFNL------IKKNITKINNNIKLILNIYKKF 333
Query: 236 FLDYKINNSDLELNIDEELYNN-FISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELI 294
+YK LNI+ +LYNN FIS D + I++ ++ K+ N F F N ++ L
Sbjct: 334 NYNYKYKKI---LNINFDLYNNFFISLNDKYNIKIIKKLNINKIHNKKFYFYNNNIKILC 390
Query: 295 FLYRARNFIETLSYKELKRWKKY---RISRFYNKKNNLYNINMFYLEIESLLKKANEHDT 351
F Y+ + + + +S E K W KY + + YN + N + +FY++ + LK +N++
Sbjct: 391 FFYKLKKYKKYISNFEKKIWIKYCKINLLKNYNNELNFFE-KLFYIK-KKYLKCSNKYKK 448
Query: 352 KILNALLMYGKSI 364
KIL L+ Y + I
Sbjct: 449 KILYFLINYARKI 461
>gi|417349929|ref|ZP_12128457.1| Exodeoxyribonuclease 1, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353571460|gb|EHC35400.1| Exodeoxyribonuclease 1, partial [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
Length = 275
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 13/238 (5%)
Query: 87 NPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILI 146
NPRLF+++ S R K + A I P +P +++ MF + S + P+ HP N+N +I
Sbjct: 1 NPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVI 60
Query: 147 TWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIHLNRSPIVISNLKVLSSNL 204
+L D L D + +R+ L K + +P+ ++H+N+ P V++ L
Sbjct: 61 MVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVKLVHINKCP-VLAQANTLRPED 119
Query: 205 MFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK----INNSDLELNIDEELYNNFIS 260
R + N+K + N + K+ + SD N+D +LY+ F S
Sbjct: 120 ADRLGINRQHCLDNLKV---LRENPQVRDKVVAIFAEAEPFAASD---NVDAQLYDGFFS 173
Query: 261 KKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYR 318
D + I+ P+ L ++ F +K++E+L+F YRARNF TL E +RW ++R
Sbjct: 174 DADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLEHR 231
>gi|417391689|ref|ZP_12154784.1| Exodeoxyribonuclease 1, partial [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353614670|gb|EHC66433.1| Exodeoxyribonuclease 1, partial [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 275
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 87 NPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPICIHPMNKNILI 146
NPRLF+++ S R K + A I P +P +++ MF + S + P+ HP N+N +I
Sbjct: 1 NPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVI 60
Query: 147 TWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIHLNRSPIVISNLKVLSSNL 204
+L D L D +R+ L K + +P+ ++H+N+ P V++ L
Sbjct: 61 MVDLAGDISPLLELDSETLRERLYTAKADLGDHAAVPVKLVHINKCP-VLAQANTLRPED 119
Query: 205 MFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK----INNSDLELNIDEELYNNFIS 260
R + N+K + N + K+ + SD N+D +LY+ F S
Sbjct: 120 ADRLGINRQHCLDNLKV---LRENPQVRDKVVAIFAEAEPFAASD---NVDAQLYDGFFS 173
Query: 261 KKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKELKRWKKYR 318
D + I+ P+ L ++ F +K++E+L+F YRARNF TL E +RW ++R
Sbjct: 174 DADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDDAEQQRWLEHR 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,721,400,330
Number of Sequences: 23463169
Number of extensions: 242153316
Number of successful extensions: 771846
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 767845
Number of HSP's gapped (non-prelim): 2061
length of query: 368
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 224
effective length of database: 8,980,499,031
effective search space: 2011631782944
effective search space used: 2011631782944
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 77 (34.3 bits)