Your job contains 1 sequence.
>psy14494
MEVYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEI
KKLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGK
PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKIINNNIISLNDLGFCKS
NLSSLGIKTGASGAKILLNNFIKKIKNYNINRNYPSINGTSYLSIHLRFGTISIRKLVKL
IFKFIKKHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAK
KNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIKNMGINWKWGENYFANKL
NDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYI
HSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNRN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14494
(470 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 533 2.9e-60 2
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 539 4.8e-60 2
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 539 4.8e-60 2
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 613 8.1e-60 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 530 2.6e-59 2
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 569 1.4e-58 2
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 525 9.9e-58 2
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 563 1.6e-54 1
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 491 2.3e-54 2
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 364 5.3e-43 3
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 353 1.5e-42 2
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 380 3.2e-41 2
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 354 2.2e-40 2
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 357 2.5e-40 2
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 351 2.4e-38 2
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 393 1.7e-36 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 331 2.1e-35 2
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 319 5.7e-33 2
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 319 8.1e-33 2
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 360 1.5e-32 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 360 1.6e-32 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 359 2.0e-32 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 358 2.8e-32 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 358 2.8e-32 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 356 4.3e-32 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 355 6.6e-32 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 353 9.5e-32 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 353 9.5e-32 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 353 9.8e-32 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 310 1.0e-31 2
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 353 1.2e-31 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 353 1.2e-31 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 353 1.3e-31 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 352 1.3e-31 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 350 2.1e-31 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 349 2.5e-31 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 350 2.5e-31 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 348 3.7e-31 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 348 4.1e-31 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 346 5.7e-31 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 343 7.2e-31 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 342 8.5e-31 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 338 6.7e-30 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 337 7.0e-30 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 332 2.3e-29 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 300 1.1e-28 2
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 322 2.9e-28 1
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 316 1.0e-27 1
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 304 1.8e-26 2
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 308 8.1e-26 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 307 9.5e-26 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 282 7.9e-25 3
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 292 2.1e-23 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 288 5.3e-23 1
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 264 1.7e-22 1
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 234 4.0e-19 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 232 9.8e-17 1
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 232 9.8e-17 1
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 533 (192.7 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 102/210 (48%), Positives = 142/210 (67%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
PSI GTS +S +L G IS R F+WL+++IWR+FY+ +L+
Sbjct: 232 PSIKGTSGISPYLAAGVISPRFVLRLLLNKHPDLLVASDSEEFSWLNEIIWREFYRHLLF 291
Query: 275 CYPNVV-NKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
+ ++ +K+ Y +LW +D F WC+G TGYPL+D+A+ QLN +G+MHNRL
Sbjct: 292 HEQRLCKHQCYKENYQEMLWHNDAAL---FDAWCQGRTGYPLVDAAMRQLNQTGWMHNRL 348
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RMV ASFL K++ I+W+ GE YF L D DLASNNG WQW+AS+GC +QP+FRIFNPI
Sbjct: 349 RMVVASFLTKHLLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIR 408
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSP 423
QS++FD +G+FIRKY+P+L+ +S+K IH P
Sbjct: 409 QSERFDPKGVFIRKYIPELNNISDKAIHFP 438
Score = 102 (41.0 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 68 NIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSF 127
NI V+ N + E RDK + ELK G + VI K ++LN++G Y +F+
Sbjct: 100 NITEVVANSEVEFNEQQRDKALYLELKASGIPLTLLEADVIVPKGKVLNQSGIMYKVFTP 159
Query: 128 YQKKWIEKVKSNKC-YLQSYPVKS 150
+++ W+ ++ YL VKS
Sbjct: 160 FKRAWLTYIQQGGFEYLGKVSVKS 183
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 539 (194.8 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 106/251 (42%), Positives = 156/251 (62%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P+ GTS LS +L G +S R ++ G WLS+LIWR+FYQ ++
Sbjct: 231 PAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSE--GAQVWLSELIWREFYQHLVA 288
Query: 275 CYPNVV-NKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
PN+ ++ F + + W +DN + F WC+G TGYP++D+A+ QLN +G+MHNRL
Sbjct: 289 IEPNLSKSRDFVEWGARLEWWNDN---EKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRL 345
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RM+ ASFL K++ I+W+WGE YF ++L D D A+NNG WQW AS+GC QP+FRIFNP+
Sbjct: 346 RMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVS 405
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
Q +KFD G FIR+++P+L +S+ YIH PW +Y + +L YP +++H +
Sbjct: 406 QGEKFDPNGDFIRRWVPELRSVSSAYIHQPW---TYPAVNS--VL---YPARLVDHKQER 457
Query: 454 KNILKRYNFIK 464
+ L+ Y K
Sbjct: 458 EVTLRLYKTAK 468
Score = 94 (38.1 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 29 EFIFKSIIELSINLQNYDSDLIIR----YAIASKEIKKLVIKLNIDAVMINHDYEPQAII 84
+ I++ + EL L + L + + A+ + +L LN V+ N DYE
Sbjct: 50 DLIWRRLAELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQ 109
Query: 85 RDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWI 133
RD+L ++ L G + ++ D+ + + K G+ + +F+ +++ W+
Sbjct: 110 RDQLAQQLLSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWL 158
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 539 (194.8 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 106/251 (42%), Positives = 156/251 (62%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P+ GTS LS +L G +S R ++ G WLS+LIWR+FYQ ++
Sbjct: 231 PAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSE--GAQVWLSELIWREFYQHLVA 288
Query: 275 CYPNVV-NKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
PN+ ++ F + + W +DN + F WC+G TGYP++D+A+ QLN +G+MHNRL
Sbjct: 289 IEPNLSKSRDFVEWGARLEWWNDN---EKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRL 345
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RM+ ASFL K++ I+W+WGE YF ++L D D A+NNG WQW AS+GC QP+FRIFNP+
Sbjct: 346 RMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVS 405
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
Q +KFD G FIR+++P+L +S+ YIH PW +Y + +L YP +++H +
Sbjct: 406 QGEKFDPNGDFIRRWVPELRSVSSAYIHQPW---TYPAVNS--VL---YPARLVDHKQER 457
Query: 454 KNILKRYNFIK 464
+ L+ Y K
Sbjct: 458 EVTLRLYKTAK 468
Score = 94 (38.1 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 29 EFIFKSIIELSINLQNYDSDLIIR----YAIASKEIKKLVIKLNIDAVMINHDYEPQAII 84
+ I++ + EL L + L + + A+ + +L LN V+ N DYE
Sbjct: 50 DLIWRRLAELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQ 109
Query: 85 RDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWI 133
RD+L ++ L G + ++ D+ + + K G+ + +F+ +++ W+
Sbjct: 110 RDQLAQQLLSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWL 158
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 151/445 (33%), Positives = 234/445 (52%)
Query: 25 DRRIEFIFKSIIELSINLQNYDSDLIIRYAI----ASKEIKKLVIKLNIDAVMINHDYEP 80
D +++F ++++EL L + L+IR A A + + L +L I+ + +N +Y
Sbjct: 45 DCKVDFWLRNLVELEKALGALNVPLLIREADTWDQAPEVLSTLCTQLKIEGLHLNQEYGI 104
Query: 81 QAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWIEKVKSNK 140
RD+ ++K L+ G + SY DQ++F+ IL KTG + +F+ ++K V N+
Sbjct: 105 NETRRDQAVQKALEKAGVQVTSYLDQLLFKPGSILTKTGNYFQVFTQFKK-----VCYNR 159
Query: 141 CYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDL--GFCKSN--LSSLGIKTGASGAXX 196
+ Q+ P V + K + S+ D GF + L L A
Sbjct: 160 MH-QAMPQP------VRTPKAQQSLSIKSDSIPDQVEGFATPSKALRDLWPAGEAEARRR 212
Query: 197 XXXXXXXXXXXXXXXXXXPSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGY 256
P+ GTS LS +L G IS R ++T +G
Sbjct: 213 MATFADAQISYYKTERDFPAKPGTSQLSAYLAAGVISPRQCLHAALGSNQGEFETGDVGT 272
Query: 257 FTWLSQLIWRDFYQMILYCYPNVV-NKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPL 315
TW+++L+WR+FY+ L YP V +++F+ E + + W A + L W + TG P+
Sbjct: 273 VTWINELLWREFYKHTLVGYPRVSRHRAFRPETEALKWRD---APEELLAWQEARTGLPI 329
Query: 316 IDSAIIQLNSSGYMHNRLRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWS 375
ID+A+ QL +G+MHNRLRMV A FL KN+ I+W GE +F L D DLASNNG WQWS
Sbjct: 330 IDAAMRQLLETGWMHNRLRMVVAMFLTKNLLIDWHEGERFFMRHLIDGDLASNNGGWQWS 389
Query: 376 ASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAG 435
+S+G S P+FRIFNP+ QS++FD +G+FI+++LP+L+ L+ K IH P AS G
Sbjct: 390 SSTGTDSAPYFRIFNPLSQSERFDPEGVFIKRWLPELADLNKKQIHDP--ASI-----GG 442
Query: 436 IILGKNYPKPILEHSLSKKNILKRY 460
+ +YPKPI++ S S+ L +
Sbjct: 443 LFGAADYPKPIVDLSKSRARALAAF 467
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 530 (191.6 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 107/247 (43%), Positives = 160/247 (64%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P++ GTS LS L G +S R D WL++LIWR+FY+ ++
Sbjct: 230 PAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQ--ALDGGAGSVWLNELIWREFYRHLIT 287
Query: 275 CYPNVV-NKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
+P++ ++ F D + W+S N A + W +G TGYP++D+A+ QLNS+G+MHNRL
Sbjct: 288 YHPSLCKHRPFIAWTDRVQWQS-NPA--HLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRL 344
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RM+TASFL+K++ I+W+ GE YF ++L D DLA+NNG WQW+AS+G + P+FRIFNP
Sbjct: 345 RMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTT 404
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
Q +KFD++G FIR++LP+L + K +H PWK + +KAG+ L +YP+PI+EH ++
Sbjct: 405 QGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWA----QKAGVTL--DYPQPIVEHKEAR 458
Query: 454 KNILKRY 460
L Y
Sbjct: 459 VQTLAAY 465
Score = 96 (38.9 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 26 RRIEFIFKSIIELSINLQNYDSDLIIRYA---IASKEIKKLVIKLN-IDAVMINHDYEPQ 81
R+ E I + L I L L+ R +AS EI K V N + + N+ YE
Sbjct: 50 RQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVN 109
Query: 82 AIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWIEKVK 137
RD +++ L+ + C+ F D VI ++ + Y +F+ ++ W+++++
Sbjct: 110 ERARDVEVERALRNVVCEGFD--DSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLR 163
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 569 (205.4 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 109/252 (43%), Positives = 159/252 (63%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P+I+GTS +S +L G +S R D TWL++LIWR+FY+ +L
Sbjct: 262 PAIDGTSVISPYLAIGVLSPRQCVAALLQRFPEVIVDDTSPGRTWLNELIWREFYRHLLV 321
Query: 275 CYPNVVN-KSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
+P++ +F ++ D++LW ++ + FL WC+G TGYP++D+A+ QLN +G+MHNRL
Sbjct: 322 AFPDLSKGNNFNRQADHVLWRNN---QSEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRL 378
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RMV ASFL K++ I+W+WGE YF L D DLA+NNG WQWSA GC +QP+FRIFNP+
Sbjct: 379 RMVVASFLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMS 438
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGK-NYPKPILEHSLS 452
QS+KFD G FIRKYLP+L+ +H P + L +A + + +YP I+EH+ +
Sbjct: 439 QSEKFDPDGRFIRKYLPELASWGVTRLHQPNQQKMPSLFEAPLFASQADYPNAIVEHNAA 498
Query: 453 KKNILKRYNFIK 464
+ L +K
Sbjct: 499 RARALTVLGVLK 510
Score = 50 (22.7 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 114 ILNKTGKPYSIFSFYQKKWIE 134
+LN +G Y +F+ + +KW E
Sbjct: 150 VLNLSGDMYRVFTPFSRKWRE 170
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 525 (189.9 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 104/247 (42%), Positives = 153/247 (61%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P I+ TS+LS +L FG ISIR +L QLIWR+F +L+
Sbjct: 224 PDISSTSHLSPYLHFGEISIRQVWTAITQATIQDKNLQKAAD-VFLRQLIWREFAYYLLW 282
Query: 275 CYPNVVNKSFKKEYDNILWESDNYAKKNFLN-WCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
+P + +F+ ++DN W+ + KN+L W KG TGYP++D+ + +L +GYMHNR+
Sbjct: 283 HFPQMGRSNFRNQFDNFKWKKN----KNWLRAWQKGLTGYPIVDAGMRELWCTGYMHNRV 338
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
RM+ ASFL+K++ I+W+ GE +F N L D DLA+N WQW A G + P+FRIFNPI+
Sbjct: 339 RMIVASFLVKDLMIDWREGEKWFWNTLLDADLANNALGWQWIAGCGPDAAPYFRIFNPIL 398
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
QSKKFD G +I++++P+L+K+ +KYIH P E + + LG +YP PI+ H +K
Sbjct: 399 QSKKFDPDGTYIKRWIPELAKVPSKYIHYPADMPDNISESSKVNLGVDYPFPIVNHHKAK 458
Query: 454 KNILKRY 460
+ LK Y
Sbjct: 459 ELALKAY 465
Score = 86 (35.3 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 24/109 (22%), Positives = 50/109 (45%)
Query: 22 IIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDAVMINHDYEPQ 81
++ D + ++ S+ L L + LI++ + + +L+ K ++ + N YEP
Sbjct: 41 MLGDAQRWWLHHSLSSLQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPP 100
Query: 82 AIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQK 130
D ++ L + + Y ++ E +I NK+G Y IF+ + K
Sbjct: 101 YREIDTYLENRLPPLSVEI--YHSTLLTEPQKIKNKSGGYYKIFTPFWK 147
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 146/448 (32%), Positives = 226/448 (50%)
Query: 30 FIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDAVMINHDYEPQAIIRDKLI 89
++ +II++ L+ S LIIR +EI LV +L I AV N Y+P + ++ +
Sbjct: 49 WLHHAIIDVKKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRLQSNQKM 108
Query: 90 KKELKVIG--CKFFSYKDQVIFEKNEILNKTGKPYSIFS-FY---QKKWIEKVKSNKCYL 143
K L+ G CK F+ ++ E I K Y +F+ FY QK+ I K S +
Sbjct: 109 KMMLEHKGMICKEFN--SHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIHKPISK---V 163
Query: 144 QSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTGASGAXXXXXXXXX 203
QS + L + S+LH L + + S++ S+ T
Sbjct: 164 QSIKGGNSLPVSLSVSELHL--------LPTIPWT-SHMESIWEPTEEGAYKTWKEFFSS 214
Query: 204 XXXXXXXXXXXPSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYF----TW 259
P+ N S L+ +L FG IS++ ++ C + ++
Sbjct: 215 KLASYSEGRDFPNQNAHSMLAPYLSFGQISVKLIYHYLINKST---ESQCSLFEKQVNSF 271
Query: 260 LSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSA 319
+ QLIWR+F +LY YP K K +++ W ++ + W KG TGYP ID+
Sbjct: 272 IRQLIWREFSYYLLYHYPFTAYKPLNKSFEHFPWNNEEELLRV---WQKGDTGYPFIDAG 328
Query: 320 IIQLNSSGYMHNRLRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSG 379
+ +L +G+MHNR RM ASFL+K++ I W+ G +F + L D D+A+N WQW A SG
Sbjct: 329 MRELWQTGFMHNRTRMAVASFLVKHLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSG 388
Query: 380 CSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILG 439
+ P+FRIFNPI Q +KFD G +IRK++P+L + NKYIH PW+A + L+KA I LG
Sbjct: 389 ADASPYFRIFNPITQGEKFDKNGEYIRKWVPELKDMPNKYIHKPWEAPEHILQKANIQLG 448
Query: 440 KNYPKPILEHSLSKKNILKRYNFIKNIL 467
YP P+++H +++ L Y +K +
Sbjct: 449 HTYPLPVVDHKAARERALCAYKSMKEFV 476
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 491 (177.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 96/242 (39%), Positives = 148/242 (61%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNV 279
TS LS + G++S R GY +W+S++ WRDFY+ +L +P +
Sbjct: 327 TSKLSPYFASGSLSARTAVAKAREANAGKISRGEAGYISWISEVAWRDFYKHVLVHWPFI 386
Query: 280 -VNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTA 338
+NK FK E+ NI W +Y +F W G TGYPL+D+A+ QL+++ +MHNR RMV +
Sbjct: 387 CMNKCFKFEFTNIDW---SYNNTHFEAWAAGKTGYPLVDAAMRQLHATAWMHNRCRMVVS 443
Query: 339 SFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKF 398
SFL K++ I+W+ GE YF L D D ASN+G W + +S+G QP+FRIFNPI QS++F
Sbjct: 444 SFLCKDLLIDWRRGERYFMEHLIDGDFASNHGGWGFGSSTGVDPQPYFRIFNPIRQSERF 503
Query: 399 DYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILK 458
D G FIR+++P+L + IH+P++ + + +A YP+PI++H+ + L+
Sbjct: 504 DPDGEFIRRWVPELRGVEGNAIHAPYERGAGDIARAN-----GYPEPIVDHARQRGVALR 558
Query: 459 RY 460
+Y
Sbjct: 559 KY 560
Score = 88 (36.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 23/122 (18%), Positives = 56/122 (45%)
Query: 27 RIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKL----NIDAVMINHDYEPQA 82
R++ +++ +L +L D L + K+I + +I L + + N +YE
Sbjct: 127 RVDLTLRTLEQLKRDLGELDVPLYMETQACRKDIPRRIINLCQEWGANHLFANLEYEVDE 186
Query: 83 IIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWIEKVKSNKCY 142
+ R+ + + G +F + D + + ++ G+ Y+++S + + W+ + N Y
Sbjct: 187 LRREAKLIRLCAENGIRFETAHDMCVVPPGVLSSQQGRQYAVYSPWFRSWLAFLNENPEY 246
Query: 143 LQ 144
L+
Sbjct: 247 LE 248
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 364 (133.2 bits), Expect = 5.3e-43, Sum P(3) = 5.3e-43
Identities = 74/207 (35%), Positives = 122/207 (58%)
Query: 217 INGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCI----GYFTWLSQLIWRDFYQMI 272
+ GTS LS+++ G IS R + + ++ ++ WRDFY+
Sbjct: 335 LGGTSGLSVYITTGRISTRLIVNQAFQSCNGQIMSKALKDNSSTQNFIKEVAWRDFYRHC 394
Query: 273 LYCYPNV-VNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHN 331
+ +P + ++ + +I WE++ A F WC G TG P++D+ + +L +GY++N
Sbjct: 395 MCNWPYTSMGMPYRLDTLDIKWENNPVA---FEKWCTGNTGIPIVDAIMRKLLYTGYINN 451
Query: 332 RLRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNP 391
R RM+TASFL KN+ I+W+WGE +F L D D +SN G W + +S+G +QP+FR+FN
Sbjct: 452 RSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFRVFNM 511
Query: 392 IIQSKKFDYQGIFIRKYLPQLSKLSNK 418
IQ+KK+D Q IF+++++P+L NK
Sbjct: 512 DIQAKKYDPQMIFVKQWVPELISSENK 538
Score = 76 (31.8 bits), Expect = 5.3e-43, Sum P(3) = 5.3e-43
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 72 VMINHDYEPQAIIRD-KLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQK 130
+ N +Y+ + RD +L++ E + K+ Y D I I G YS+F+ + K
Sbjct: 191 ITANIEYQTDELYRDIRLLENEDHRLQLKY--YHDSCIVAPGLITTDRGTNYSVFTPWYK 248
Query: 131 KWIEKVKSNK 140
KW+ V + K
Sbjct: 249 KWVLYVNNYK 258
Score = 51 (23.0 bits), Expect = 5.3e-43, Sum P(3) = 5.3e-43
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 440 KNYPKPILEHSLSKKNILKRY 460
+NYPKP+++ S++ LK Y
Sbjct: 541 ENYPKPLVDLKHSRERALKVY 561
Score = 40 (19.1 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 103 YKDQVIFEKNEILNKTGKPYSIFSFYQKKW 132
YK +F++ N K Y+++ + W
Sbjct: 94 YKSVALFQQLRQKNAKAKLYAVYVINEDDW 123
Score = 39 (18.8 bits), Expect = 3.7e-39, Sum P(3) = 3.7e-39
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 74 INHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTGK 120
I HD+E + K + + G F+ K + + EI+ K K
Sbjct: 21 IEHDFEQYHSLNKKYYPRPITRTGANQFNNKSRA--KPMEIVEKLQK 65
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 353 (129.3 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 79/245 (32%), Positives = 134/245 (54%)
Query: 218 NGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKT-DCIGYFT---WLSQLIWRDFYQMIL 273
N TS LS +L FG IS+R + + G + +L + R++ + I
Sbjct: 242 NSTSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYIC 301
Query: 274 YCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRL 333
+ +P +S W++D F W +G TGYPL+D+ + +L ++G+MHNR+
Sbjct: 302 FNFPFTHEQSLLSHLRFFPWDAD---VDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRI 358
Query: 334 RMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPII 393
R++ +SF +K + + WKWG YF + L D DL + WQ+ + S R+ NP +
Sbjct: 359 RVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPAL 418
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
Q K+D +G +IR++LP+L++L ++IH PW A L+ +G+ LG NY KPI++ ++
Sbjct: 419 QGAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTAR 478
Query: 454 KNILK 458
+ + K
Sbjct: 479 ELLAK 483
Score = 125 (49.1 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 33 KSIIELSINLQNYDSDL-IIRYAIASKEIKKLVIKLNIDAVMINHDYEPQAIIRDKLIKK 91
+S+ LS +L+ SDL +I+ I + V+ NH Y+P +++RD +K+
Sbjct: 58 QSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKE 117
Query: 92 ELKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFSFYQKKWIE 134
+L G SY +++E EI + GKP++ F+ Y KK ++
Sbjct: 118 KLVERGISVQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLD 160
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 380 (138.8 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 85/244 (34%), Positives = 131/244 (53%)
Query: 217 INGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCY 276
I T+ LS ++RFG +S R KT + QL+WR+F+
Sbjct: 271 IPSTTVLSPYVRFGCLSARIFWWRLADVYRG--KTHSDPPVSLHGQLLWREFFYTTAVGI 328
Query: 277 PNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMV 336
PN + W+++ ++ W + TG+P ID+ + QL G++H+ R
Sbjct: 329 PNFNKMEGNSACVQVDWDNN---PEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHA 385
Query: 337 TASFLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQS 395
A FL + ++ I+W+ G+ F L D D + N GNWQW ++S Q +FR+++PI
Sbjct: 386 VACFLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQ-YFRVYSPIAFG 444
Query: 396 KKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSL-SKK 454
KK D G +I+KYLP L K +YI+ PWKA E+AG I+GK+YP+PI++H + KK
Sbjct: 445 KKTDKHGDYIKKYLPVLKKFPTEYIYEPWKAPRSVQERAGCIVGKDYPRPIVDHEVVHKK 504
Query: 455 NILK 458
NIL+
Sbjct: 505 NILR 508
Score = 74 (31.1 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 27/118 (22%), Positives = 53/118 (44%)
Query: 5 CVFIFDKNILDPLRSQGI-IEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKL 63
C I+ +LDP + I R F+ +++ +L +L+ +S L + ++ + KL
Sbjct: 54 CRHIYPLFLLDPWFPKNTRIGINRWRFLIEALKDLDSSLKKLNSRLFVVRGSPTEVLPKL 113
Query: 64 VIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKT-GK 120
+ I + D EP + RDK + K K G + ++ + I+++ GK
Sbjct: 114 FKQWKITRLTFEVDTEPYSQSRDKEVMKLAKEYGVEVTPKISHTLYNIDRIIDENNGK 171
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 354 (129.7 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 83/248 (33%), Positives = 134/248 (54%)
Query: 215 PSINGTSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILY 274
P+ +GTS LS L G I R H G T+L QL+WRDF ++Y
Sbjct: 231 PAGDGTSTLSDALSLGEIGPRTLWHRAGEAA--HKGAQ--GAETFLKQLVWRDFAYHLMY 286
Query: 275 CYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLR 334
P++++++++ ++ W +D A F+ W +G TG PL+D+A+ ++ +G MHNR R
Sbjct: 287 HTPHLLSENWRPGWEVFPWATDP-ADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHNRAR 345
Query: 335 MVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQ 394
M+ AS+L K++ ++WK G ++FA+ L D+D A+N WQW A G + P+FRIFNP Q
Sbjct: 346 MIAASYLTKHLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNPETQ 405
Query: 395 SKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKA--SSYKLEKAGIILGKNYPKPILEHSLS 452
+KKFD +G + ++ + + S + A S+ L +YP PI+
Sbjct: 406 AKKFDPKGRYRNHWIAEGQAEPPRAALSYFDAVPRSWNLRPDA-----SYPPPIMALDQG 460
Query: 453 KKNILKRY 460
++ L Y
Sbjct: 461 RRRALSAY 468
Score = 92 (37.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 42 LQNYDSDLIIRYAIASKEIKKLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFF 101
L + S LI+R A ++ L+ + AV +Y PQAI RD +K L+ G +
Sbjct: 65 LGDMGSRLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTALQQAGIEAR 124
Query: 102 SYKDQVIFEKNEILNKTGKPYSIFS 126
S+ ++FE + G Y +++
Sbjct: 125 SFGGALLFEPWTVETGAGGFYKVYT 149
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 357 (130.7 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 81/235 (34%), Positives = 125/235 (53%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKT------DCIGYFTWLSQLIWRDFYQMIL 273
TS+LS HL FG +S+R + + F L + R++ + I
Sbjct: 247 TSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLF--LKSIGLREYSRYIS 304
Query: 274 YCYPNVVNKSFKKEYDNILWESD-NYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNR 332
+ +P + W D NY K W +G TGYPL+D+ + +L ++G++H+R
Sbjct: 305 FNHPYSHERPLLGHLKFFPWAVDENYFKA----WRQGRTGYPLVDAGMRELWATGWLHDR 360
Query: 333 LRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPI 392
+R+V +SF +K + + W+WG YF + L D DL S+ WQ+ + S+ F RI NP
Sbjct: 361 IRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQ 420
Query: 393 IQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPIL 447
+ KFD G ++R++LP+LS+L +IH PW A L+ AGI LG NYP PI+
Sbjct: 421 FEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIV 475
Score = 103 (41.3 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 24/99 (24%), Positives = 53/99 (53%)
Query: 34 SIIELSINLQNYDSDLIIRYAIAS-KEIKKLVIKLNIDAVMINHDYEPQAIIRDKLIKKE 92
S+ +L +L++ + LI + + S + +V + NH Y+P +++RD K
Sbjct: 66 SLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDV 125
Query: 93 LKVIGCKFFSYKDQVIFEKNEILNKTGKPYSIFS-FYQK 130
L G S+ +++E E+ ++ G+P+S+F+ F+++
Sbjct: 126 LTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWER 164
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 351 (128.6 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 83/242 (34%), Positives = 124/242 (51%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNV 279
T+ LS +L+FG +S R K + + QL+WR+FY + PN
Sbjct: 258 TTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPPV-SLIGQLMWREFYYTVAAAEPNF 316
Query: 280 VNKSFKKEYD-NILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTA 338
++ Y I W+ + W G TGYP ID+ + QL G++H+ R A
Sbjct: 317 -DRMLGNVYCMQIPWQEH---PDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVA 372
Query: 339 SFLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKK 397
FL + ++ I+W+ G+ F L D D A N GNW W ++S Q +FR+++P+ KK
Sbjct: 373 CFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQ-YFRVYSPVAFGKK 431
Query: 398 FDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNIL 457
D QG +IRKY+P+LSK I+ PWKAS G +LG +YP I++H + K +
Sbjct: 432 TDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENI 491
Query: 458 KR 459
KR
Sbjct: 492 KR 493
Score = 81 (33.6 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 24/116 (20%), Positives = 53/116 (45%)
Query: 6 VFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVI 65
+FI D ILD ++ + R F+ +++ +L L+ +S L + ++ ++
Sbjct: 43 IFILDPGILDWMQ----VGANRWRFLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFK 98
Query: 66 KLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKT-GK 120
++ + D EP ++ RD ++K K G + ++ I+ ++ K GK
Sbjct: 99 SWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGK 154
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 129/472 (27%), Positives = 201/472 (42%)
Query: 3 VYCVFIFDKNIL--DPLR-SQGIIED--RRIEFIFKSIIELSINLQNYDSDLIIRYAIAS 57
+Y VF+ D + + DP S G RI F+ +S+ +L +L+ S L++
Sbjct: 52 MYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPG 111
Query: 58 KEIKKLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNK 117
+ + + + + + + +D +P D +K G + FS +F I+ K
Sbjct: 112 EVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEK 171
Query: 118 TG--KPYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDL 175
G P S SF KV +S V SY ++L + SL +L
Sbjct: 172 NGGKPPLSYQSFL------KVAGEPSCAKSELVMSY-SSLPPIGDIGNLGISEVPSLEEL 224
Query: 176 GFCKSNLSS-LGIKTGASGAXXXXXXXXXXXXXXXXXXX---XPSI---NGTSYLSIHLR 228
G+ + + G S A PS T+ +S +L+
Sbjct: 225 GYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLK 284
Query: 229 FGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEY 288
FG +S R K + L QL+WR+F+ + PN +
Sbjct: 285 FGCLSSRYFYQCLQNIYKD-VKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRIC 343
Query: 289 DNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGI 347
I W D+ W G TGYP ID+ ++QL G+MH+ R A FL + ++ I
Sbjct: 344 KQIPWNEDHAM---LAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFI 400
Query: 348 NWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRK 407
+W+ G + F L D D A NNGNW W + S Q F RI++PI KK+D G +IR
Sbjct: 401 HWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQ-FNRIYSPISFGKKYDPDGKYIRH 459
Query: 408 YLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKR 459
+LP L + +YI+ PW A KA I+GK+YPKP++ H + K ++
Sbjct: 460 FLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRK 511
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 331 (121.6 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 78/240 (32%), Positives = 123/240 (51%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNV 279
T+ LS +L G +S+R K + + Q++WR+F+ + PN
Sbjct: 269 TTGLSPYLSLGCLSVRTFYHRLNSIYAQS-KNHSLPPVSLQGQVLWREFFYTVASATPNF 327
Query: 280 VNKSFKKEYDNILWESDNYAKKNFLN-WCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTA 338
K E ++I + D Y L W TG+P ID+ + QL G++H+ R A
Sbjct: 328 T----KMEGNSICLQIDWYHDPERLEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVA 383
Query: 339 SFLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKK 397
FL + ++ I+W+ G F L D D + N GNW W ++S + + RIF P+ ++
Sbjct: 384 CFLTRGDLWISWEEGMKVFEEFLLDADYSVNAGNWMWLSASAFFHK-YTRIFCPVRFGRR 442
Query: 398 FDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEH-SLSKKNI 456
D QG ++RKYLP L ++YI+ PWKA AG I+GK+YP+PI+ H S++N+
Sbjct: 443 TDPQGEYLRKYLPVLKNFPSQYIYEPWKAPEDVQLSAGCIIGKDYPRPIVSHIEASQRNL 502
Score = 79 (32.9 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 24/117 (20%), Positives = 51/117 (43%)
Query: 3 VYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKK 62
+Y V++ D+ L G + R F+ +S+ +L LQ S L + + +++
Sbjct: 52 LYPVYVLDRVFLQGAMHMGAL---RWRFLLQSLEDLDTRLQAIGSRLFVLCGSTANILRE 108
Query: 63 LVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
LV + I + + + EP DK I+ + G + ++ +++ I+ G
Sbjct: 109 LVAQWGITQISYDTEVEPYYTRMDKDIQTVAQENGLQTYTCVSHTLYDVKRIVKANG 165
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 319 (117.4 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 72/231 (31%), Positives = 115/231 (49%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNV 279
T+ LS + G +S+R K + + QL+WR+F+ + PN
Sbjct: 246 TTGLSPYFSTGCLSVRSFFYRLSNIYA-QAKHHSLPPVSLQGQLLWREFFYTVASATPNF 304
Query: 280 VNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTAS 339
+ I W D + W TG+P ID+ + QL G++H+ R A
Sbjct: 305 TKMAGNPICLQIRWYED---AERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAAC 361
Query: 340 FLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKF 398
FL + ++ I+W+ G F L D D + N GNW W ++S + RIF P+ ++
Sbjct: 362 FLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHH-YTRIFCPVRFGRRT 420
Query: 399 DYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEH 449
D +G +IRKYLP L +KYI+ PW AS + ++AG I+G++YP P+++H
Sbjct: 421 DPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFPMVDH 471
Score = 65 (27.9 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 26/117 (22%), Positives = 50/117 (42%)
Query: 3 VYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKK 62
VY V+I D+ + G + R F+ +S+ +L +L+ S L++ ++
Sbjct: 31 VYPVYILDRAFMTSSMHIGAL---RWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRD 87
Query: 63 LVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
V K NI V ++ + EP + I+ + +G + S ++ IL G
Sbjct: 88 HVQKWNITQVTLDAEMEPFYKEMEANIRGLGEELGFQVLSLMGHSLYNTQRILELNG 144
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 319 (117.4 bits), Expect = 8.1e-33, Sum P(2) = 8.1e-33
Identities = 72/231 (31%), Positives = 115/231 (49%)
Query: 220 TSYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNV 279
T+ LS + G +S+R K + + QL+WR+F+ + PN
Sbjct: 264 TTGLSPYFSTGCLSVRSFFYRLSNIYA-QAKHHSLPPVSLQGQLLWREFFYTVASATPNF 322
Query: 280 VNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTAS 339
+ I W D + W TG+P ID+ + QL G++H+ R A
Sbjct: 323 TKMAGNPICLQIRWYED---AERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAAC 379
Query: 340 FLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKF 398
FL + ++ I+W+ G F L D D + N GNW W ++S + RIF P+ ++
Sbjct: 380 FLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHH-YTRIFCPVRFGRRT 438
Query: 399 DYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEH 449
D +G +IRKYLP L +KYI+ PW AS + ++AG I+G++YP P+++H
Sbjct: 439 DPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFPMVDH 489
Score = 65 (27.9 bits), Expect = 8.1e-33, Sum P(2) = 8.1e-33
Identities = 26/117 (22%), Positives = 50/117 (42%)
Query: 3 VYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKK 62
VY V+I D+ + G + R F+ +S+ +L +L+ S L++ ++
Sbjct: 49 VYPVYILDRAFMTSSMHIGAL---RWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRD 105
Query: 63 LVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
V K NI V ++ + EP + I+ + +G + S ++ IL G
Sbjct: 106 HVQKWNITQVTLDAEMEPFYKEMEANIRGLGEELGFQVLSLMGHSLYNTQRILELNG 162
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 360 (131.8 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 121/468 (25%), Positives = 196/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
I K++ + +++ + S H SL +LGF LSS + G
Sbjct: 156 L-ISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVP-SLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 360 (131.8 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 121/468 (25%), Positives = 196/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L++ + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
I K++ + +++ + S H SL +LGF LSS + G
Sbjct: 156 L-ISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVP-SLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERRAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLI-KNMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 359 (131.4 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 121/468 (25%), Positives = 196/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
I K++ + +++ + S H SL +LGF LSS + G
Sbjct: 156 L-ISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVP-SLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKRNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGINYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 358 (131.1 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 115/476 (24%), Positives = 199/476 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 49 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 103
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ + I+ G K
Sbjct: 104 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQK 163
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ K + + ++ N + + SL +LGF
Sbjct: 164 PPLTYKRFQAL-ISRMELPKKPVGAVS-SQHMENCRAEIQENHDDTYGVPSLEELGFPTE 221
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L + G P +N S L S +LRFG +S
Sbjct: 222 GLGP-AVWQGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSC 280
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 281 RLFYYRLWDLYRK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWD 339
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W+ G
Sbjct: 340 RNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGV 396
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLS 413
F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YLP+L
Sbjct: 397 RVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYLPKLK 455
Query: 414 KLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 456 GFPSRYIYEPWNAPESVQKAANCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 511
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 358 (131.1 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 115/476 (24%), Positives = 199/476 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 49 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 103
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ + I+ G K
Sbjct: 104 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQK 163
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ K + + ++ N + + SL +LGF
Sbjct: 164 PPLTYKRFQAL-ISRMELPKKPVGAVS-SQHMENCRAEIQENHDDTYGVPSLEELGFPTE 221
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L + G P +N S L S +LRFG +S
Sbjct: 222 GLGP-AVWQGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSC 280
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 281 RLFYYRLWDLYRK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWD 339
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W+ G
Sbjct: 340 RNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGV 396
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLS 413
F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YLP+L
Sbjct: 397 RVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYLPKLK 455
Query: 414 KLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 456 GFPSRYIYEPWNAPESVQKAANCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 511
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 356 (130.4 bits), Expect = 4.3e-32, P = 4.3e-32
Identities = 123/472 (26%), Positives = 200/472 (42%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVH--SSKLHKXXXXXXX--SLNDLGFCKSNLSSLG 186
I K++ L+ PV++ + +V ++ L SL +LGF L S
Sbjct: 156 L-ISKMEP----LE-IPVETITSEVVEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPS-A 208
Query: 187 IKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXX 240
+ G P +N S L S +LRFG +S R
Sbjct: 209 VWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFK 268
Query: 241 XXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAK 300
K + + QL+WR+F+ P I W+ + A
Sbjct: 269 LTDLYKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA- 326
Query: 301 KNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANK 359
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F
Sbjct: 327 --LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEEL 384
Query: 360 LNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSN 417
L D D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L
Sbjct: 385 LLDADWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPA 441
Query: 418 KYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
KYI+ PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 442 KYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 355 (130.0 bits), Expect = 6.6e-32, P = 6.6e-32
Identities = 120/468 (25%), Positives = 194/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
+ K++ + + + S H SL +LGF LSS + G
Sbjct: 156 L-VSKMEPLEMPADTITSDVIGKCMTPLSDDHDEKYGVP-SLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 353 (129.3 bits), Expect = 9.5e-32, P = 9.5e-32
Identities = 118/468 (25%), Positives = 192/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
+ K++ + + + SL +LGF LSS + G
Sbjct: 156 L-VSKMEPLEMPADTI-TSDVIGKCTTPLSDDHDEKYGVPSLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 353 (129.3 bits), Expect = 9.5e-32, P = 9.5e-32
Identities = 118/468 (25%), Positives = 192/468 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
+ K++ + + + SL +LGF LSS + G
Sbjct: 156 L-VSKMEPLEMPADTI-TSDVIGKCTTPLSDDHDEKYGVPSLEELGFDTDGLSS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L KYI+
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIY 445
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 DPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 353 (129.3 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 117/478 (24%), Positives = 198/478 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 49 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 103
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ + I+ G K
Sbjct: 104 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQK 163
Query: 121 PYSIFSFYQK--KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFC 178
P + +Q +E K + S ++S + + H SL +LGF
Sbjct: 164 PPLTYKRFQALISRMELPKKPAVAVSSQQMESCRAEIQEN---HDDTYGVP-SLEELGFP 219
Query: 179 KSNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTI 232
L + G P +N S L S +LRFG +
Sbjct: 220 TEGLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCL 278
Query: 233 SIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNIL 292
S R K + + QL+WR+F+ P I
Sbjct: 279 SCRLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIP 337
Query: 293 WESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKW 351
W+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W+
Sbjct: 338 WDRNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWES 394
Query: 352 GENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQ 411
G F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YLP+
Sbjct: 395 GVRVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYLPK 453
Query: 412 LSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
L ++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 454 LKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 511
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 310 (114.2 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 79/254 (31%), Positives = 130/254 (51%)
Query: 223 LSIHLRFGTISIRXXX-----XXXXXXXXXHYKTDCIGYFTWLSQLIWRD-FYQMILYCY 276
+S LRFG +S+R Y+ + T QLIWR+ FY M ++
Sbjct: 265 MSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHIT--GQLIWREYFYTMSVH-N 321
Query: 277 PNVVNKSFKKEYDNILWESDNYAKKNFLN-WCKGYTGYPLIDSAIIQLNSSGYMHNRLRM 335
P+ NI W K + L+ W +G TG+P+ID+A+ QL + G++H+ LR
Sbjct: 322 PHYAEMEANPICLNIPWYEP---KDDSLDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRN 378
Query: 336 VTASFLIKN-MGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQ-PFFRIFNPII 393
+TA+FL + + I+W+ G +F L D D + GNW W +SS +PI
Sbjct: 379 ITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPIA 438
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
+++ D +G ++R+YLP+L L Y+H PWKA ++ G I+G++YP P+++ + +
Sbjct: 439 LARRLDPKGEYVRRYLPELKNLPTLYVHEPWKAPLDVQKECGCIVGRDYPAPMIDLAAAS 498
Query: 454 KNILKRYNFIKNIL 467
+ N I+ L
Sbjct: 499 RANANTMNSIRQKL 512
Score = 83 (34.3 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 25/119 (21%), Positives = 52/119 (43%)
Query: 1 MEVYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEI 60
+ +Y +FIFD ++ R++F+ +S+ +L L+ L + A +
Sbjct: 35 VRLYPIFIFDGESA----GTKLVGFNRMKFLLESLADLDRQLREIGGQLYVFKGNAVNVM 90
Query: 61 KKLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
++L +LNI + D EP RD I+ +++ K +++ +I+ G
Sbjct: 91 RRLFEELNIRKLCFEQDCEPIWKARDDAIQNLCRMMDVKCVEKVSHTLWDPQQIIRTNG 149
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 121/478 (25%), Positives = 199/478 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + R F+ + + +L NL+ +S L + +
Sbjct: 31 VRCVYI-----LDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + +I + I +D EP RD IKK G + +++ ++I+ G +
Sbjct: 86 RLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQ 145
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ + +++ + S H SL +LGF
Sbjct: 146 PPLTYKRFQTL-ISRMEPLEMPVETITPEVMQKCTTPVSDDHDEKYGVP-SLEELGFDTD 203
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L S + G P +N S L S +LRFG +S
Sbjct: 204 GLPS-AVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSC 262
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 263 RLFYFKLTDLYKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWD 321
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 322 KNPEA---LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGM 378
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQ 411
F L D D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP
Sbjct: 379 KVFEELLLDADWSVNAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPV 435
Query: 412 LSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
L KYI+ PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 436 LRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 121/478 (25%), Positives = 199/478 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + R F+ + + +L NL+ +S L + +
Sbjct: 31 VRCVYI-----LDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + +I + I +D EP RD IKK G + +++ ++I+ G +
Sbjct: 86 RLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQ 145
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ + +++ + S H SL +LGF
Sbjct: 146 PPLTYKRFQTL-ISRMEPLEMPVETITPEVMQKCTTPVSDDHDEKYGVP-SLEELGFDTD 203
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L S + G P +N S L S +LRFG +S
Sbjct: 204 GLPS-AVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSC 262
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 263 RLFYFKLTDLYKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWD 321
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 322 KNPEA---LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGM 378
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQ 411
F L D D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP
Sbjct: 379 KVFEELLLDADWSVNAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPV 435
Query: 412 LSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
L KYI+ PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 436 LRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 353 (129.3 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 121/478 (25%), Positives = 199/478 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + R F+ + + +L NL+ +S L + +
Sbjct: 31 VRCVYI-----LDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + +I + I +D EP RD IKK G + +++ ++I+ G +
Sbjct: 86 RLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQ 145
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ + +++ + S H SL +LGF
Sbjct: 146 PPLTYKRFQTL-ISRMEPLEMPVETITPEVMQKCTTPVSDDHDEKYGVP-SLEELGFDTD 203
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L S + G P +N S L S +LRFG +S
Sbjct: 204 GLPS-AVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSC 262
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 263 RLFYFKLTDLYKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWD 321
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 322 KNPEA---LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGM 378
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQ 411
F L D D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP
Sbjct: 379 KVFEELLLDADWSVNAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPV 435
Query: 412 LSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
L KYI+ PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 436 LRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 352 (129.0 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 118/480 (24%), Positives = 200/480 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 50 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 104
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ ++I+ G K
Sbjct: 105 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDKIIELNGQK 164
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLG 176
P + +Q I +++ L PV S + + S + + SL +LG
Sbjct: 165 PPLTYKRFQAI-ISRME-----LPKKPVGSVTSQQMESCRADIQDNHDDTYGVPSLEELG 218
Query: 177 FCKSNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFG 230
F L + G P +N S L S +LRFG
Sbjct: 219 FPTEGLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFG 277
Query: 231 TISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDN 290
+S R K + + QL+WR+F+ P
Sbjct: 278 CLSCRLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQ 336
Query: 291 ILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINW 349
I W+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W
Sbjct: 337 IPWDRNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSW 393
Query: 350 KWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYL 409
+ G F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YL
Sbjct: 394 ESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYL 452
Query: 410 PQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
P L ++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 453 PILKGFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 512
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 117/480 (24%), Positives = 199/480 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 50 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 104
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ + I+ G K
Sbjct: 105 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQK 164
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLG 176
P + +Q I +++ L PV + + S + + SL +LG
Sbjct: 165 PPLTYKRFQAI-ISRME-----LPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELG 218
Query: 177 FCKSNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFG 230
F L + G P +N S L S +LRFG
Sbjct: 219 FPTEGLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFG 277
Query: 231 TISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDN 290
+S R K + + QL+WR+F+ P
Sbjct: 278 CLSCRLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQ 336
Query: 291 ILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINW 349
I W+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W
Sbjct: 337 IPWDRNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSW 393
Query: 350 KWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYL 409
+ G F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YL
Sbjct: 394 ESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYL 452
Query: 410 PQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
P+L ++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 453 PKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 512
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 349 (127.9 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 114/470 (24%), Positives = 197/470 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + + R F+ +S+ +L +L+ +S L + + +L + +
Sbjct: 45 ILDPWFAASSAVGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTR 104
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ +D EP RD I K K G + ++ + I+ G KP + +Q
Sbjct: 105 LAFEYDSEPFGKERDAAIIKLAKEAGVEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQA 164
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLGFCKSNLSSLG 186
I +++ L PV S ++ + + K+ + SL +LGF L+
Sbjct: 165 I-ISRME-----LPKKPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAP-A 217
Query: 187 IKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXX 240
+ G P +N S L S +LRFG +S R
Sbjct: 218 VWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYR 277
Query: 241 XXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAK 300
K + + QL+WR+F+ P I W+ + A
Sbjct: 278 LWELYKK-VKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEA- 335
Query: 301 KNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANK 359
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F
Sbjct: 336 --LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDEL 393
Query: 360 LNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKY 419
L D D + N G+W W + S Q FF + P+ ++ D G ++++YLP+L ++Y
Sbjct: 394 LLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRY 452
Query: 420 IHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
I+ PW A + A I+G +YPKP++ H+ + + ++R I L+R
Sbjct: 453 IYEPWNAPESVQKAAKCIIGVDYPKPMVNHAETSRLNIERMKQIYQQLSR 502
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 350 (128.3 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 117/480 (24%), Positives = 199/480 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 71 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 125
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + + + +D EP RD I K K G + + +++ + I+ G K
Sbjct: 126 RLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQK 185
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLG 176
P + +Q I +++ L PV + + S + + SL +LG
Sbjct: 186 PPLTYKRFQAI-ISRME-----LPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELG 239
Query: 177 FCKSNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFG 230
F L + G P +N S L S +LRFG
Sbjct: 240 FPTEGLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFG 298
Query: 231 TISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDN 290
+S R K + + QL+WR+F+ P
Sbjct: 299 CLSCRLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQ 357
Query: 291 ILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINW 349
I W+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W
Sbjct: 358 IPWDRNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSW 414
Query: 350 KWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYL 409
+ G F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YL
Sbjct: 415 ESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYL 473
Query: 410 PQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
P+L ++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 474 PKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 533
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 348 (127.6 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 115/466 (24%), Positives = 194/466 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + R F+ +S+ +L +L+ +S L + +
Sbjct: 31 VRCVYI-----LDPWFAGSANVGVNRWRFLLESLEDLDTSLRKLNSRLSVVRGQPTDVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + N+ + +D EP RD I K + G + ++ + I+
Sbjct: 86 RLFKEWNVTRLTFEYDSEPYGKERDAAIIKMAQEYGVETVVRNSHTLYNPDRIIEMNNHS 145
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P F +Q + +++ + L + + S H SL +LGF ++
Sbjct: 146 PPLTFKRFQAI-VNRLELPRKPLPTITQEQMARCRTQISDNHDEHYGVP-SLEELGF-RT 202
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSY------LSIHLRFGTISI 234
SL + G P I+G S LS +LRFG +S
Sbjct: 203 QGDSLHVWKGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSPTGLSPYLRFGCLSC 262
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R + + QL+WR+F+ PN + I W+
Sbjct: 263 RVFYYNLRDLFMKLRRRSSPP-LSLFGQLLWREFFYTAGTNNPNFDHMEGNPICVQIPWD 321
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 322 HNPEA---LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGM 378
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLS 413
F L D D + N G+W W + S Q FF + P+ ++ D G +IR+Y+P+L
Sbjct: 379 KVFEELLLDADWSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYIPKLK 437
Query: 414 KLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKR 459
N+YI+ PW A + A I+G +YPKP++ H+ S + ++R
Sbjct: 438 DYPNRYIYEPWNAPESVQKAANCIVGVDYPKPMINHAESSRLNIER 483
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 348 (127.6 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 117/480 (24%), Positives = 199/480 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + + R F+ +S+ +L +L+ +S L + +
Sbjct: 70 VRCVYI-----LDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFP 124
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+ + + +D EP RD I K K G + + +++ ++I+ G K
Sbjct: 125 GYSREWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDKIIELNGQK 184
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLG 176
P + +Q I +++ L PV S + + S + + SL +LG
Sbjct: 185 PPLTYKRFQAL-ISRME-----LPKKPVGSVTSQQMESCRAEIQENHDETYGVPSLEELG 238
Query: 177 FCKSNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFG 230
F L + G P +N S L S +LRFG
Sbjct: 239 FPTEGLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFG 297
Query: 231 TISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDN 290
+S R K + + QL+WR+F+ P
Sbjct: 298 CLSCRLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQ 356
Query: 291 ILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINW 349
I W+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W
Sbjct: 357 IPWDRNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSW 413
Query: 350 KWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYL 409
+ G F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YL
Sbjct: 414 ESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYL 472
Query: 410 PQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
P+L ++YI+ PW A + A I+G +YP+PI+ H+ + + ++R I L+R
Sbjct: 473 PKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSR 532
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 346 (126.9 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 120/469 (25%), Positives = 195/469 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
I K++ + +++ + S H SL +LGF L S + G
Sbjct: 156 L-ISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVP-SLEELGFDTDGLPS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388
Query: 364 DLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRK-YLPQLSKLSNKYI 420
D + N G+W W + CSS Q FF + P+ ++ D G +IR+ YLP L KYI
Sbjct: 389 DWSINAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRRYLPVLRGFPAKYI 445
Query: 421 HSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
+ PW A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 446 YDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 494
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 343 (125.8 bits), Expect = 7.2e-31, P = 7.2e-31
Identities = 112/468 (23%), Positives = 196/468 (41%)
Query: 15 DP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDAVM 73
DP + + R F+ +S+ +L +L+ +S L + + +L + + +
Sbjct: 2 DPWFAASSAVGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLT 61
Query: 74 INHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQKKW 132
+D EP RD I K K G + +++ + I+ G KP + +Q
Sbjct: 62 FEYDSEPFGKERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAI- 120
Query: 133 IEKVKSNKCYLQSYPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLGFCKSNLSSLGIK 188
I +++ L PV S ++ + + K+ + SL +LGF L+ +
Sbjct: 121 ISRME-----LPKKPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAP-AVW 174
Query: 189 TGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXX 242
G P +N S L S +LRFG +S R
Sbjct: 175 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLW 234
Query: 243 XXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKN 302
K + + QL+WR+F+ P I W+ + A
Sbjct: 235 ELYKK-VKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEA--- 290
Query: 303 FLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLN 361
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L
Sbjct: 291 LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLL 350
Query: 362 DFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIH 421
D D + N G+W W + S Q FF + P+ ++ D G ++++YLP+L ++YI+
Sbjct: 351 DADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIY 409
Query: 422 SPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
PW A + A I+G +YPKP++ H+ + + ++R I L+R
Sbjct: 410 EPWNAPESVQKAAKCIIGVDYPKPMVNHAETSRLNIERMKQIYQQLSR 457
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 342 (125.4 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 110/455 (24%), Positives = 192/455 (42%)
Query: 27 RIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDAVMINHDYEPQAIIRD 86
R F+ +S+ +L +L+ +S L + + +L + + + +D EP RD
Sbjct: 9 RWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYDSEPFGKERD 68
Query: 87 KLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQKKWIEKVKSNKCYLQS 145
I K K G + +++ + I+ G KP + +Q I +++ L
Sbjct: 69 AAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAI-ISRME-----LPK 122
Query: 146 YPVKSYLNNLVHSSKL----HKXXXXXXXSLNDLGFCKSNLSSLGIKTGASGAXXXXXXX 201
PV S ++ + + K+ + SL +LGF L+ + G
Sbjct: 123 KPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAP-AVWQGGETEALARLDK 181
Query: 202 XXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXXXXXHYKTDCIG 255
P +N S L S +LRFG +S R K +
Sbjct: 182 HLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLWELYKK-VKRNSTP 240
Query: 256 YFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPL 315
+ QL+WR+F+ P I W+ + A W +G TG+P
Sbjct: 241 PLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEA---LAKWAEGKTGFPW 297
Query: 316 IDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQW 374
ID+ + QL G++H+ R A FL + ++ I+W+ G F L D D + N G+W W
Sbjct: 298 IDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMW 357
Query: 375 SASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKA 434
+ S Q FF + P+ ++ D G ++++YLP+L ++YI+ PW A + A
Sbjct: 358 LSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAA 416
Query: 435 GIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
I+G +YPKP++ H+ + + ++R I L+R
Sbjct: 417 KCIIGVDYPKPMVNHAETSRLNIERMKQIYQQLSR 451
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 338 (124.0 bits), Expect = 6.7e-30, P = 6.7e-30
Identities = 120/478 (25%), Positives = 192/478 (40%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+ LDP + R F+ + + +L NL+ +S L + +
Sbjct: 31 VRCVYF-----LDPWFAGSSNLGVNRWRFLLQCLDDLDSNLRKLNSRLFVVRGQPANVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+L + I + +D EP RD IKK G + ++ ++I+ G +
Sbjct: 86 RLFKEWKISRLTFEYDSEPFGKERDAAIKKLAMEAGVEVIVKTSHTLYNLDKIIELNGGQ 145
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I ++ + +++ S + V SL +LGF
Sbjct: 146 PPLTYKRFQTL-ISRMDPPEMPVETLS-NSIMGCCVTPVSEDHGDKYGVPSLEELGFDIE 203
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L S + G P +N S L S +LRFG +S
Sbjct: 204 GLPS-AVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSC 262
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R KT + QL+WR+F+ P I W+
Sbjct: 263 RLFYFKLTDLYRKVKKTSTPPLSLY-GQLLWREFFYTAATTNPRFDKMEGNPICVRIPWD 321
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W + TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 322 KNPEA---LAKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGM 378
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQ 411
F L D D + N G+W W + CSS Q FF + P+ ++ D G FIR+YLP
Sbjct: 379 KVFEELLLDADWSVNAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDFIRRYLPI 435
Query: 412 LSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
L KYI+ PW A A I+G +YPKP++ H+ + + ++R I L+R
Sbjct: 436 LRGFPAKYIYDPWNAPDSVQAAAKCIIGVHYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 337 (123.7 bits), Expect = 7.0e-30, P = 7.0e-30
Identities = 119/467 (25%), Positives = 193/467 (41%)
Query: 3 VYCVFIFDKNILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIK 61
V CV+I LDP + R F+ + + +L +L+ +S L + +
Sbjct: 31 VRCVYI-----LDPWFAGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFP 85
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-- 119
+L + NI+ + +D EP RD IKK G + +++ ++I+ G
Sbjct: 86 RLFKEWNINRLSYEYDSEPFGKERDAAIKKLANEAGVEVIVRISHTLYDLDKIIELNGGQ 145
Query: 120 KPYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCK 179
P + F + I ++++ + ++ + S H SL +LGF
Sbjct: 146 SPLTYKRF--QTLISRMEAVETPAETITAEVMGPCTTPLSDDHDEKFGVP-SLEELGFDT 202
Query: 180 SNLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTIS 233
LSS + G P +N S L S +LRFG +S
Sbjct: 203 EGLSS-AVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLS 261
Query: 234 IRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILW 293
R K + + QL+WR+F+ P I W
Sbjct: 262 CRLFYFKLTDLYRK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW 320
Query: 294 ESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWG 352
+ + A W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G
Sbjct: 321 DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEG 377
Query: 353 ENYFANKLNDFDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLP 410
F L D D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP
Sbjct: 378 MKVFEELLLDADWSVNAGSWMWLS---CSSFFQQFFHCYCPVSFGRRTDPNGDYIRRYLP 434
Query: 411 QLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHS-LSKKNI 456
L KYI+ PW A + A I+G +YP P++ H+ S+ NI
Sbjct: 435 VLRGFPAKYIYDPWNAPESVQKAAKCIIGVHYPMPMVHHAEASRLNI 481
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 332 (121.9 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 115/457 (25%), Positives = 189/457 (41%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L +L+ +S L + + +L + I
Sbjct: 36 ILDPWFAGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISR 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG--KPYSIFSFYQ 129
+ +D EP RD I+K G + F +++ ++I+ G P + F
Sbjct: 96 LSYEYDSEPFGKDRDAAIRKLATEAGVEVFVRISHTLYDLDKIIEFNGGQSPLTYKRF-- 153
Query: 130 KKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKT 189
+ I ++ + ++ + S H SL +LGF LS+ +
Sbjct: 154 QTLISRMDPVEMPAETITAEIMGKCSTPVSDDHDNKFGVP-SLEELGFETEGLST-AVWP 211
Query: 190 GASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXX 243
G P +N S L S +LRFG +S R
Sbjct: 212 GGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTD 271
Query: 244 XXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNF 303
K + + QL+WR+F+ P+ F I W+ + A
Sbjct: 272 LYRK-VKKNSTPSLSLYGQLLWREFFYTAATNNPHFDKMEFNPICVQIPWDRNPEA---L 327
Query: 304 LNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLND 362
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D
Sbjct: 328 AKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLD 387
Query: 363 FDLASNNGNWQWSASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYI 420
D + N G+W W + CSS Q FF + P+ ++ D G +IR+YLP L K+I
Sbjct: 388 ADWSVNAGSWMWLS---CSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPILRGFPAKFI 444
Query: 421 HSPWKASSYKLEKAGIILGKNYPKPILEHS-LSKKNI 456
+ PW A + A I+G +YPKP++ H+ S+ NI
Sbjct: 445 YDPWNAPESVQKVAKCIIGVHYPKPMVNHAEASRINI 481
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 300 (110.7 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 73/250 (29%), Positives = 129/250 (51%)
Query: 215 PSING-TSYLSIHLRFGTISIRXXX-----XXXXXXXXXHYKTDCIGYFTWLSQLIWRDF 268
P I G + +S LRFG +S+R +K + T QLIWR++
Sbjct: 257 PEILGPATSMSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHIT--GQLIWREY 314
Query: 269 YQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGY 328
+ + P+ NI W + W +G TG+P+ID+A+ QL + G+
Sbjct: 315 FYTMSVQNPHYGEMERNPICLNIPWYKPE--DDSLTRWKEGRTGFPMIDAAMRQLLAEGW 372
Query: 329 MHNRLRMVTASFLIKN-MGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQ-PFF 386
+H+ LR +TA+FL + + ++W+ G +F L D D + GNW W +SS
Sbjct: 373 LHHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSS 432
Query: 387 RIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPI 446
+ PI +++ D +G ++++YLP+L+ +++H PWKAS + + G ++G+ YP P+
Sbjct: 433 KCTCPIALARRLDPKGDYVKRYLPELANYPAQFVHEPWKASREQQIEYGCVIGEKYPAPM 492
Query: 447 LEHSL-SKKN 455
++ ++ SK+N
Sbjct: 493 VDLAIVSKRN 502
Score = 72 (30.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 22/119 (18%), Positives = 52/119 (43%)
Query: 1 MEVYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEI 60
++++ +FIFD I+ R++F+ +S+ +L ++ L++ + +
Sbjct: 37 VKLFPIFIFDGESA----GTRIVGYNRMKFLLESLADLDRQFRDLGGQLLVFRGDSVTVL 92
Query: 61 KKLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
++L +LNI + D EP RD + K + + + ++ E++ G
Sbjct: 93 RRLFEELNIKKLCYEQDCEPIWKERDDAVAKLCRTMDVRCVENVSHTLWNPIEVIQTNG 151
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 322 (118.4 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 113/476 (23%), Positives = 196/476 (41%)
Query: 3 VYCVFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSIN-LQNYDSDLIIRYAIASKEIK 61
V CV+I D S GI RR ++ K +E+ L+ +L+ + + S +
Sbjct: 67 VRCVYILDPWFAAS-SSVGINRWRR--YV-KQGVEIKETVLRKTSGNLVSCWKVPSSDSL 122
Query: 62 KLVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-K 120
+ + + +D EP RD I K K G + + +++ ++I+ G K
Sbjct: 123 PQQ-EWGVTRLTFEYDSEPFGKERDTAIMKMAKEAGVEVVTENSHTLYDLDKIIELNGQK 181
Query: 121 PYSIFSFYQKKWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKS 180
P + +Q I +++ + + S + + H SL +LGF
Sbjct: 182 PPLTYKRFQAI-ISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVP-SLEELGFPTE 239
Query: 181 NLSSLGIKTGASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISI 234
L + G P +N S L S +LRFG +S
Sbjct: 240 GLGP-AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSC 298
Query: 235 RXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWE 294
R K + + QL+WR+F+ P I W+
Sbjct: 299 RLFYYRLWDLYKK-VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWD 357
Query: 295 SDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGE 353
+ A W +G TG+P ID+ + QL G++H+ R A FL + ++ ++W+ G
Sbjct: 358 RNPEA---LAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGV 414
Query: 354 NYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLS 413
F L D D + N G+W W + S Q FF + P+ ++ D G +IR+YLP+L
Sbjct: 415 RVFDELLLDADFSVNAGSWMWLSCSAFFQQ-FFHCYCPVGFGRRTDPSGDYIRRYLPKLK 473
Query: 414 KLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
++YI+ PW A + A ++G +YP+PI+ H+ + + ++R + L+R
Sbjct: 474 GFPSRYIYEPWNAPESIQKAAKCVIGVDYPRPIVNHAEASRLNIERMKQVYQQLSR 529
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 316 (116.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 81/254 (31%), Positives = 130/254 (51%)
Query: 221 SYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCI---GYFTWLSQLIWRD-FYQMILYCY 276
S +S LRFG +S+R + + G QLIWR+ FY M ++
Sbjct: 217 SSMSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVH-N 275
Query: 277 PNVVNKSFKKEYDNILWESDNYAKKNFLN-WCKGYTGYPLIDSAIIQLNSSGYMHNRLRM 335
P+ NI W AK + L+ W +G TG+PLID+A+ QL + G++H+ LR
Sbjct: 276 PHYAVMELNPICLNIPWYE---AKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRN 332
Query: 336 VTASFLIKN-MGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQ-PFFRIFNPII 393
+TA+FL + + I+W+ G +F L D D + GNW W +SS +P+
Sbjct: 333 ITATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPVA 392
Query: 394 QSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLSK 453
+++ D +G ++++YLP+L K Y+H PWKA E+ G ++GK+YP P++ +
Sbjct: 393 LARRLDPKGEYVKRYLPELEKFPALYVHEPWKAPPELQEQYGCVIGKDYPAPMVNLAEVN 452
Query: 454 KNILKRYNFIKNIL 467
K + N I+ L
Sbjct: 453 KCNANKMNAIRQKL 466
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 304 (112.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 76/255 (29%), Positives = 131/255 (51%)
Query: 215 PSINGT-SYLSIHLRFGTISIRXXXXXXXXXXXXHYKTDCI------GYFTWLSQLIWRD 267
P+I+ + +S HLRFG +S+R C+ G QLIWR+
Sbjct: 257 PNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLIWRE 316
Query: 268 FYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL-NWCKGYTGYPLIDSAIIQLNSS 326
++ + PN +I W N +N L +W G TG+PLID A+ QL +
Sbjct: 317 YFYTMSVNNPNYDRMEGNDICLSIPWAKPN---ENLLQSWRLGQTGFPLIDGAMRQLLAE 373
Query: 327 GYMHNRLRMVTASFLIKNMGI--NWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQP 384
G++H+ LR A+FL + G+ +W+ G +F L D D + GNW W +SS
Sbjct: 374 GWLHHTLRNTVATFLTRG-GLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLL 432
Query: 385 FFRIFN-PIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYP 443
+ P+ +K+ D G +I++Y+P+L + +++H PW+ S+ + E+ ++G +YP
Sbjct: 433 DSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYP 492
Query: 444 KPILEHSLS-KKNIL 457
+ I++ S++ K+N+L
Sbjct: 493 ERIIDLSMAVKRNML 507
Score = 44 (20.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 22/117 (18%), Positives = 47/117 (40%)
Query: 6 VFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYDSD---LIIRYAIASKEIKK 62
VFIFD ++ G R+ F+ S+ ++ LQ L++ + ++
Sbjct: 39 VFIFDGESAGT-KNVGY---NRMRFLLDSLQDIDDQLQAATDGRGRLLVFEGEPAYIFRR 94
Query: 63 LVIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
L ++ + + I D EP RD+ I+ + + F +++ ++ G
Sbjct: 95 LHEQVRLHRICIEQDCEPIWNERDESIRSLCRELNIDFVEKVSHTLWDPQLVIETNG 151
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 308 (113.5 bits), Expect = 8.1e-26, P = 8.1e-26
Identities = 77/255 (30%), Positives = 126/255 (49%)
Query: 223 LSIHLRFGTISIRXXXXXXXXXXXXHYKTDCI------GYFTWLSQLIWRDFYQMILYCY 276
+S HLRFG +S+R C+ G QLIWR+++ +
Sbjct: 266 MSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNN 325
Query: 277 PNVVNKSFKKEYDNILWESDNYAKKNFLN-WCKGYTGYPLIDSAIIQLNSSGYMHNRLRM 335
PN + I W + +N L W G TG+PLID A+ QL + G++H+ LR
Sbjct: 326 PNYDRMEGNEICLTIPWAKPD---ENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRN 382
Query: 336 VTASFLIKNMGI--NWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFN-PI 392
A+FL + G+ +W+ G +F L D D + GNW W +SS + P+
Sbjct: 383 TVATFLTRG-GLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPV 441
Query: 393 IQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPILEHSLS 452
+K+ D +G++IR+Y+P+L L +YIH PW+ S+ + K ++G +YP+ I++ S +
Sbjct: 442 ALAKRLDPEGVYIRRYVPELKNLPKEYIHEPWRLSAEQQVKFECLIGVHYPERIIDLSKA 501
Query: 453 KKNILKRYNFIKNIL 467
K + ++N L
Sbjct: 502 VKRNMMAMTALRNSL 516
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 307 (113.1 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 64/190 (33%), Positives = 106/190 (55%)
Query: 259 W-LSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLID 317
W + +L+WRD+++ + Y N + + ++ W +D K F W +G TG P +D
Sbjct: 289 WVIFELLWRDYFKFVALKYGNRIFYMNGLQDKHVPWNTD---MKMFDAWKEGRTGVPFVD 345
Query: 318 SAIIQLNSSGYMHNRLRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSAS 377
+ + +L +G+M NR R ASFL K++G++W+ G +F L D D+ SN GNW +SA
Sbjct: 346 ANMRELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAG 405
Query: 378 SGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGII 437
G + R FN I Q +D G ++R+++P+L + +H+PW S+ L A +
Sbjct: 406 IGNDPREN-RKFNMIKQGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVS 464
Query: 438 LGKNYPKPIL 447
L + YP PI+
Sbjct: 465 LNQTYPCPII 474
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 282 (104.3 bits), Expect = 7.9e-25, Sum P(3) = 7.9e-25
Identities = 60/163 (36%), Positives = 96/163 (58%)
Query: 278 NVVNKSFKKEYDNILWESDN-YAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMV 336
N V+ ++++ +E D+ A+ F W G TG+P ID+ + QL G++H+ R
Sbjct: 364 NAVSGQVLRKFE---YEVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHLGRHS 420
Query: 337 TASFLIKN-MGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQS 395
A FL + ++W+ G + F L D + A N GNWQW + + SQ +FR ++PI
Sbjct: 421 VACFLTRGGCYVSWERGLDVFEELLLDHEPACNAGNWQWLSCTAFFSQ-YFRCYSPISFG 479
Query: 396 KKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLEKAGIIL 438
KK+D G FIRK++P+L+ L KYI+ PWKA +L +AG+++
Sbjct: 480 KKWDPDGTFIRKWVPELASLDKKYIYEPWKAPEAELRRAGVVM 522
Score = 62 (26.9 bits), Expect = 7.9e-25, Sum P(3) = 7.9e-25
Identities = 23/116 (19%), Positives = 52/116 (44%)
Query: 6 VFIFDKNILDPLRSQGIIEDRRIEFIFKSIIELSINLQNYD--SDLIIRYAIASKEIKKL 63
+F +D + + RS+G + R +++ +LS ++ N + S L + KL
Sbjct: 36 IFTWDPHYV--YRSRGGLN--RWQYLLDCQNDLSASITNLNPRSKLFVLREAPQSLFPKL 91
Query: 64 VIKLNIDAVMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG 119
+ ++ D + A RD+++KK + G K + + +++ + I+ G
Sbjct: 92 FKAWKVTHLVFEKDTDAYARQRDEVVKKAAQAAGVKVITRYGRTLWDSDAIVKANG 147
Score = 37 (18.1 bits), Expect = 7.9e-25, Sum P(3) = 7.9e-25
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 220 TSYLSIHLRFGTISIR 235
T+ LS + FG++S+R
Sbjct: 277 TTLLSPAMHFGSLSVR 292
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 292 (107.8 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 110/457 (24%), Positives = 185/457 (40%)
Query: 27 RIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDAVMINHDYEPQAIIRD 86
R F+ +S+ +L +L+ +S L + + +L + + + D EP RD
Sbjct: 51 RWRFLLQSLEDLDASLRKLNSCLFVIRGQPADIFPRLFKEWKVSRLTFEFDSEPFGKERD 110
Query: 87 KLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG--KPYSIFSFYQKKWIEKVKSNKCYLQ 144
IKK G + +++ + I+ G P + F + + ++ L
Sbjct: 111 AAIKKLACEAGVEVIVKISHTLYDLDRIIELNGGQSPLTYKRF--QTLVSSMEPPDPPLS 168
Query: 145 SYPVKSYLNNLVHS-SKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTGASGAXXXXXXXXX 203
S P + + V S+ H+ L +LGF L+ G S A
Sbjct: 169 S-PDRGMMGKCVTPISENHRDKYGVPL-LEELGFDTEGLAPAVWPGGESEALKRMERHLG 226
Query: 204 XXXXXX--XXXXXPSINGTSY------LSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIG 255
P +N + LS +LRFG +S R K +
Sbjct: 227 PDSTVAWQENFERPKMNASPLMASPLGLSPYLRFGCLSCRLFYCKLTQLYKK-VKKNMNP 285
Query: 256 YFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPL 315
+ +++WR+F+ P I W+ + A W + TG+P
Sbjct: 286 SISLYDKILWREFFYTAATNNPRFDRMEGNPICIRIPWDRNAEA---LAKWAEAKTGFPW 342
Query: 316 IDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDFDLASNNGNWQW 374
ID+ ++QL G++H+ R A FL + ++ I+W+ G F L D D + N G+W
Sbjct: 343 IDAIMMQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSW-- 400
Query: 375 SASSGCSS--QPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPWKASSYKLE 432
CSS Q FF + P+ ++ D G FIR+YLP L KYI+ PW A
Sbjct: 401 -LCHSCSSFFQQFFHCYCPVGFGRRIDPNGDFIRRYLPVLRDFPAKYIYDPWNAPHDVQL 459
Query: 433 KAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
A ++G +YPKP++ H+ + + ++R I L+R
Sbjct: 460 AAKCVIGVDYPKPMVNHAEASRLNIERMRQIYQQLSR 496
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 288 (106.4 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 108/466 (23%), Positives = 188/466 (40%)
Query: 13 ILDP-LRSQGIIEDRRIEFIFKSIIELSINLQNYDSDLIIRYAIASKEIKKLVIKLNIDA 71
ILDP + R F+ + + +L NL+ +S L + + +L + NI
Sbjct: 36 ILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITK 95
Query: 72 VMINHDYEPQAIIRDKLIKKELKVIGCKFFSYKDQVIFEKNEILNKTG-KPYSIFSFYQK 130
+ I +D EP RD IKK G + +++ ++I+ G +P + +Q
Sbjct: 96 LSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQT 155
Query: 131 KWIEKVKSNKCYLQSYPVKSYLNNLVHSSKLHKXXXXXXXSLNDLGFCKSNLSSLGIKTG 190
I K++ + +++ + S H SL +LGF L S + G
Sbjct: 156 L-ISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVP-SLEELGFDTDGLPS-AVWPG 212
Query: 191 ASGAXXXXXXXXXXXXXXXXXXXXPSINGTSYL------SIHLRFGTISIRXXXXXXXXX 244
P +N S L S +LRFG +S R
Sbjct: 213 GETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDL 272
Query: 245 XXXHYKTDCIGYFTWLSQLIWRDFYQMILYCYPNVVNKSFKKEYDNILWESDNYAKKNFL 304
K + + QL+WR+F+ P I W+ + A
Sbjct: 273 YKK-VKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEA---LA 328
Query: 305 NWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDF 363
W +G TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G + ++
Sbjct: 329 KWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVKKHLFLNY 388
Query: 364 DLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSP 423
+ N ++QW Q ++P++ + + +G R+YLP L KYI+ P
Sbjct: 389 RESVNLKSFQWLNQPTHQHQVVHE-YSPLLMGSRDEEKGNNKRRYLPVLRGFPAKYIYDP 447
Query: 424 WKASSYKLEKAGIILGKNYPKPILEHSLSKKNILKRYNFIKNILNR 469
W A + A ++G NYPKP++ H+ + + ++R I L+R
Sbjct: 448 WNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSR 493
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 264 (98.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 57/155 (36%), Positives = 87/155 (56%)
Query: 293 WESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIKNMGINWKWG 352
W SD+ K W +G TGYPL+D+A+ QL +G+M+N +R V ASFLI + W+ G
Sbjct: 4 WSSDHAHLKA---WQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLIAYLHFPWQEG 60
Query: 353 ENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQL 412
+F + L D D+A + WQ G F + +PI + D G F+R++ P+L
Sbjct: 61 YRWFQDTLVDADVAIDAMMWQNGGMCGLDHWNF--VMHPIDAALTCDPCGTFVRQWCPEL 118
Query: 413 SKLSNKYIHSPWKASSYKLEKAGIILGKNYPKPIL 447
L + IH PWK + L +AG++ G +YP+ I+
Sbjct: 119 KALPDDLIHKPWKCPTSMLRRAGVVFGDSYPERIV 153
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 234 (87.4 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 306 WCKGYTGYPLIDSAIIQLNSSGYMHNRLRMVTASFLIK-NMGINWKWGENYFANKLNDFD 364
W TG+P ID+ + QL G++H+ R A FL + ++ I+W+ G F L D D
Sbjct: 12 WKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDAD 71
Query: 365 LASNNGNWQWSASSGCSSQPFFRIFNPIIQSKKFDYQGIFIRKYLPQLSKLSNKYIHSPW 424
+ N GNW W ++S + RIF P+ ++ D +G +IRKYLP L +KYI+ PW
Sbjct: 72 YSINAGNWMWLSASAFFHH-YTRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPW 130
Query: 425 KASSYKLEKA 434
AS + ++A
Sbjct: 131 TASEEEQKQA 140
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 232 (86.7 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 67/229 (29%), Positives = 110/229 (48%)
Query: 217 INGTSY---LSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMIL 273
++G Y S L G +S + H D Y+ + +L+WR+++
Sbjct: 229 LDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDST-YWIFF-ELLWREYF---- 282
Query: 274 YCYPNVVN-KSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNR 332
Y Y K F+ ++ + FL W G T +P++++ + QLN +GYM NR
Sbjct: 283 YWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNR 342
Query: 333 LRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPI 392
R + AS L+ +G++W++G YF +L D+D+ SN GNWQ+ A G + R FN
Sbjct: 343 GRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGS-RQFNLE 401
Query: 393 IQSKKFDYQGIFIRKYL----PQLSKLSNKYIHS------PWKASSYKL 431
Q+ +D +G F+ K+ +L+ L N + S P AS+Y L
Sbjct: 402 KQAHTYDPKGEFVAKWCGTACDKLNALENLALDSVDMVDWPIAASAYLL 450
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 232 (86.7 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 67/229 (29%), Positives = 110/229 (48%)
Query: 217 INGTSY---LSIHLRFGTISIRXXXXXXXXXXXXHYKTDCIGYFTWLSQLIWRDFYQMIL 273
++G Y S L G +S + H D Y+ + +L+WR+++
Sbjct: 229 LDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDST-YWIFF-ELLWREYF---- 282
Query: 274 YCYPNVVN-KSFKKEYDNILWESDNYAKKNFLNWCKGYTGYPLIDSAIIQLNSSGYMHNR 332
Y Y K F+ ++ + FL W G T +P++++ + QLN +GYM NR
Sbjct: 283 YWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNR 342
Query: 333 LRMVTASFLIKNMGINWKWGENYFANKLNDFDLASNNGNWQWSASSGCSSQPFFRIFNPI 392
R + AS L+ +G++W++G YF +L D+D+ SN GNWQ+ A G + R FN
Sbjct: 343 GRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGS-RQFNLE 401
Query: 393 IQSKKFDYQGIFIRKYL----PQLSKLSNKYIHS------PWKASSYKL 431
Q+ +D +G F+ K+ +L+ L N + S P AS+Y L
Sbjct: 402 KQAHTYDPKGEFVAKWCGTACDKLNALENLALDSVDMVDWPIAASAYLL 450
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 470 431 0.00086 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 621 (66 KB)
Total size of DFA: 296 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.39u 0.12s 33.51t Elapsed: 00:00:02
Total cpu time: 33.41u 0.12s 33.53t Elapsed: 00:00:02
Start: Thu Aug 15 12:41:36 2013 End: Thu Aug 15 12:41:38 2013