Query psy14495
Match_columns 766
No_of_seqs 318 out of 2322
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 21:15:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14495.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14495hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nv9_A Malic enzyme; rossmann 100.0 1E-132 5E-137 1094.3 33.9 416 11-443 31-462 (487)
2 2a9f_A Putative malic enzyme ( 100.0 3E-121 1E-125 999.5 17.9 381 12-410 7-391 (398)
3 1gq2_A Malic enzyme; oxidoredu 100.0 8E-116 3E-120 979.1 24.5 374 33-424 76-529 (555)
4 1pj3_A NAD-dependent malic enz 100.0 2E-115 6E-120 980.0 24.1 386 30-432 75-543 (564)
5 1vl6_A Malate oxidoreductase; 100.0 6E-115 2E-119 949.5 26.8 371 14-406 13-388 (388)
6 1o0s_A NAD-ME, NAD-dependent m 100.0 5E-115 2E-119 977.1 24.0 374 33-424 112-566 (605)
7 2dvm_A Malic enzyme, 439AA lon 100.0 9.4E-94 3.2E-98 799.9 30.7 411 13-443 3-428 (439)
8 4e4r_A Phosphate acetyltransfe 100.0 7E-77 2.4E-81 644.3 34.1 321 436-765 7-331 (331)
9 2af4_C Phosphate acetyltransfe 100.0 4.9E-66 1.7E-70 561.9 38.1 320 436-765 4-330 (333)
10 1vmi_A Putative phosphate acet 100.0 6.5E-66 2.2E-70 564.6 30.7 321 435-765 13-337 (355)
11 1td9_A Phosphate acetyltransfe 100.0 2.5E-64 8.4E-69 547.7 37.6 320 435-763 9-328 (329)
12 1r5j_A Putative phosphotransac 100.0 2.8E-63 9.7E-68 541.4 34.4 322 435-765 11-334 (337)
13 3uf6_A LMO1369 protein; struct 100.0 8.4E-62 2.9E-66 517.4 26.0 268 452-764 19-290 (291)
14 1yco_A Branched-chain phosphot 100.0 4.1E-59 1.4E-63 494.3 28.8 267 452-764 2-274 (279)
15 1vi1_A Fatty acid/phospholipid 100.0 3.4E-44 1.2E-48 391.4 27.7 264 461-765 16-318 (345)
16 1u7n_A Fatty acid/phospholipid 100.0 9.1E-44 3.1E-48 387.1 28.1 272 452-766 4-322 (336)
17 3lxy_A 4-hydroxythreonine-4-ph 99.8 1.6E-17 5.6E-22 178.5 18.5 280 452-765 9-331 (334)
18 1x13_A NAD(P) transhydrogenase 99.2 1E-11 3.5E-16 138.1 9.3 245 60-324 26-326 (401)
19 3h9u_A Adenosylhomocysteinase; 99.0 8.4E-10 2.9E-14 122.9 12.2 129 160-306 170-311 (436)
20 3gvp_A Adenosylhomocysteinase 99.0 2.5E-09 8.5E-14 118.8 14.5 128 160-305 179-319 (435)
21 1l7d_A Nicotinamide nucleotide 98.6 4.3E-08 1.5E-12 108.2 8.7 214 60-295 19-296 (384)
22 3ond_A Adenosylhomocysteinase; 98.6 3.4E-07 1.2E-11 103.4 13.2 130 160-307 224-366 (488)
23 1yxo_A 4-hydroxythreonine-4-ph 98.4 1.8E-05 6.3E-10 84.8 22.4 280 452-765 3-326 (328)
24 4aty_A Terephthalate 1,2-CIS-d 98.3 4.7E-06 1.6E-10 90.9 15.0 282 452-764 9-343 (349)
25 2hi1_A 4-hydroxythreonine-4-ph 98.3 1.1E-05 3.9E-10 86.5 16.2 269 454-763 9-330 (330)
26 3n58_A Adenosylhomocysteinase; 98.2 9.5E-06 3.3E-10 90.5 13.3 128 160-305 206-346 (464)
27 4dio_A NAD(P) transhydrogenase 97.9 2.4E-05 8.1E-10 86.7 8.9 101 191-294 187-313 (405)
28 3d4o_A Dipicolinate synthase s 97.7 0.00041 1.4E-08 73.4 15.6 143 151-304 107-255 (293)
29 3p2y_A Alanine dehydrogenase/p 97.6 9E-05 3.1E-09 81.5 8.2 102 192-296 182-305 (381)
30 3tsn_A 4-hydroxythreonine-4-ph 97.4 0.0095 3.3E-07 64.6 21.1 276 452-762 5-363 (367)
31 2rir_A Dipicolinate synthase, 97.1 0.0034 1.2E-07 66.4 13.4 109 186-304 149-257 (300)
32 1nvt_A Shikimate 5'-dehydrogen 97.0 0.00099 3.4E-08 70.2 7.7 177 104-295 33-233 (287)
33 3r3j_A Glutamate dehydrogenase 97.0 0.0063 2.2E-07 68.0 14.1 204 100-309 117-371 (456)
34 1v8b_A Adenosylhomocysteinase; 97.0 0.005 1.7E-07 69.6 13.1 123 168-306 234-357 (479)
35 1a4i_A Methylenetetrahydrofola 96.8 0.0022 7.5E-08 68.1 8.2 95 172-295 143-239 (301)
36 3l07_A Bifunctional protein fo 96.7 0.0031 1.1E-07 66.6 8.6 90 175-293 142-233 (285)
37 4a26_A Putative C-1-tetrahydro 96.7 0.0048 1.6E-07 65.6 9.7 156 109-293 65-239 (300)
38 3d64_A Adenosylhomocysteinase; 96.7 0.0062 2.1E-07 69.1 11.2 119 170-304 256-375 (494)
39 2bma_A Glutamate dehydrogenase 96.7 0.0067 2.3E-07 68.1 11.1 168 124-296 164-372 (470)
40 4fcc_A Glutamate dehydrogenase 96.6 0.015 5.2E-07 64.9 13.4 193 99-296 112-354 (450)
41 3p2o_A Bifunctional protein fo 96.6 0.0049 1.7E-07 65.0 8.6 90 174-292 140-231 (285)
42 3pwz_A Shikimate dehydrogenase 96.5 0.0019 6.4E-08 67.9 5.2 129 95-229 10-153 (272)
43 3k92_A NAD-GDH, NAD-specific g 96.5 0.012 4.1E-07 65.4 11.8 193 99-296 97-329 (424)
44 2o4c_A Erythronate-4-phosphate 96.5 0.023 8E-07 62.4 13.9 141 134-294 56-208 (380)
45 4a5o_A Bifunctional protein fo 96.5 0.0053 1.8E-07 64.8 8.3 89 175-292 142-232 (286)
46 3aoe_E Glutamate dehydrogenase 96.5 0.018 6.2E-07 63.9 12.9 191 100-296 95-323 (419)
47 3o8q_A Shikimate 5-dehydrogena 96.4 0.0063 2.1E-07 64.2 8.5 164 95-273 16-198 (281)
48 3ngx_A Bifunctional protein fo 96.4 0.0054 1.9E-07 64.4 7.8 89 174-293 132-222 (276)
49 1b0a_A Protein (fold bifunctio 96.4 0.0048 1.6E-07 65.1 7.3 93 173-294 138-232 (288)
50 3don_A Shikimate dehydrogenase 96.4 0.0034 1.2E-07 66.1 6.1 168 109-296 26-214 (277)
51 2eez_A Alanine dehydrogenase; 96.3 0.019 6.4E-07 62.6 12.0 95 191-295 163-268 (369)
52 2d5c_A AROE, shikimate 5-dehyd 96.3 0.024 8.1E-07 58.6 11.8 102 179-294 102-207 (263)
53 3fbt_A Chorismate mutase and s 96.3 0.0046 1.6E-07 65.3 6.2 180 95-296 13-218 (282)
54 1edz_A 5,10-methylenetetrahydr 96.1 0.0088 3E-07 64.2 7.3 110 177-296 151-278 (320)
55 1pjc_A Protein (L-alanine dehy 96.0 0.014 4.9E-07 63.4 8.9 94 192-295 165-269 (361)
56 3tum_A Shikimate dehydrogenase 95.9 0.0094 3.2E-07 62.5 6.5 179 95-292 14-224 (269)
57 1v9l_A Glutamate dehydrogenase 95.9 0.031 1E-06 62.2 10.8 191 100-296 87-325 (421)
58 3oet_A Erythronate-4-phosphate 95.8 0.067 2.3E-06 58.7 13.3 119 161-296 83-213 (381)
59 1c1d_A L-phenylalanine dehydro 95.8 0.064 2.2E-06 58.4 12.8 141 140-296 114-265 (355)
60 3jyo_A Quinate/shikimate dehyd 95.7 0.013 4.5E-07 61.8 7.0 165 95-273 12-205 (283)
61 2c2x_A Methylenetetrahydrofola 95.7 0.016 5.5E-07 61.0 7.4 158 109-295 60-234 (281)
62 3k5p_A D-3-phosphoglycerate de 95.7 0.12 4.2E-06 57.3 14.9 173 102-297 50-248 (416)
63 2gcg_A Glyoxylate reductase/hy 95.7 0.099 3.4E-06 56.1 13.6 173 103-294 46-247 (330)
64 2cuk_A Glycerate dehydrogenase 95.7 0.13 4.3E-06 54.9 14.3 141 134-296 63-232 (311)
65 3ce6_A Adenosylhomocysteinase; 95.6 0.058 2E-06 61.2 12.1 106 186-306 266-374 (494)
66 1wwk_A Phosphoglycerate dehydr 95.6 0.094 3.2E-06 55.8 13.0 145 134-295 64-234 (307)
67 3aog_A Glutamate dehydrogenase 95.5 0.063 2.1E-06 60.0 11.7 193 100-296 112-344 (440)
68 3jtm_A Formate dehydrogenase, 95.5 0.14 4.8E-06 55.6 14.2 174 103-295 55-258 (351)
69 2qrj_A Saccharopine dehydrogen 95.5 0.1 3.6E-06 57.4 13.0 80 194-293 214-300 (394)
70 4g2n_A D-isomer specific 2-hyd 95.4 0.11 3.8E-06 56.3 13.0 121 161-295 116-265 (345)
71 2hk9_A Shikimate dehydrogenase 95.4 0.047 1.6E-06 56.9 9.7 165 110-294 39-222 (275)
72 2dbq_A Glyoxylate reductase; D 95.3 0.19 6.4E-06 54.1 14.1 144 134-294 65-241 (334)
73 2ekl_A D-3-phosphoglycerate de 95.3 0.23 7.7E-06 53.0 14.7 172 103-295 39-234 (313)
74 3u62_A Shikimate dehydrogenase 95.3 0.066 2.3E-06 55.5 10.1 165 95-294 8-201 (253)
75 2vhw_A Alanine dehydrogenase; 95.2 0.098 3.4E-06 57.2 11.9 94 191-294 165-269 (377)
76 3ba1_A HPPR, hydroxyphenylpyru 95.1 0.18 6E-06 54.4 13.3 118 162-296 110-254 (333)
77 3t4e_A Quinate/shikimate dehyd 95.0 0.034 1.2E-06 59.5 7.2 162 95-274 39-232 (312)
78 1gpj_A Glutamyl-tRNA reductase 95.0 0.14 4.8E-06 56.5 12.2 176 102-296 83-269 (404)
79 2g76_A 3-PGDH, D-3-phosphoglyc 94.9 0.22 7.4E-06 53.7 13.3 171 104-295 61-257 (335)
80 1xdw_A NAD+-dependent (R)-2-hy 94.8 0.16 5.4E-06 54.6 11.9 169 105-294 40-235 (331)
81 3gg9_A D-3-phosphoglycerate de 94.8 0.18 6.1E-06 54.8 12.3 122 162-296 98-254 (352)
82 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.015 5E-07 54.3 3.3 89 194-295 21-112 (144)
83 4dgs_A Dehydrogenase; structur 94.8 0.28 9.7E-06 52.9 13.7 142 135-296 92-261 (340)
84 1leh_A Leucine dehydrogenase; 94.7 0.074 2.5E-06 58.1 9.0 180 100-294 62-261 (364)
85 2egg_A AROE, shikimate 5-dehyd 94.6 0.069 2.4E-06 56.5 8.3 86 179-273 125-215 (297)
86 2pi1_A D-lactate dehydrogenase 94.6 0.22 7.6E-06 53.6 12.3 145 134-296 62-233 (334)
87 2tmg_A Protein (glutamate dehy 94.4 0.24 8.4E-06 54.9 12.4 166 124-294 120-316 (415)
88 2nac_A NAD-dependent formate d 94.4 0.36 1.2E-05 53.1 13.7 146 134-294 111-284 (393)
89 1sc6_A PGDH, D-3-phosphoglycer 94.4 0.33 1.1E-05 53.7 13.3 170 103-295 40-235 (404)
90 2yfq_A Padgh, NAD-GDH, NAD-spe 94.4 0.15 5E-06 56.7 10.5 189 100-294 88-323 (421)
91 2w2k_A D-mandelate dehydrogena 94.3 0.44 1.5E-05 51.5 14.0 122 162-295 103-258 (348)
92 3dtt_A NADP oxidoreductase; st 94.3 0.09 3.1E-06 53.7 8.1 105 188-296 13-127 (245)
93 1lu9_A Methylene tetrahydromet 94.2 0.17 6E-06 52.7 10.2 151 108-271 24-197 (287)
94 1j4a_A D-LDH, D-lactate dehydr 94.2 0.43 1.5E-05 51.2 13.5 119 162-295 93-237 (333)
95 3evt_A Phosphoglycerate dehydr 94.1 0.16 5.3E-06 54.6 9.7 148 132-296 57-230 (324)
96 1mx3_A CTBP1, C-terminal bindi 94.1 0.32 1.1E-05 52.6 12.2 147 135-297 84-263 (347)
97 1qp8_A Formate dehydrogenase; 94.0 0.55 1.9E-05 49.8 13.5 115 162-294 72-211 (303)
98 3tri_A Pyrroline-5-carboxylate 93.9 0.1 3.4E-06 54.6 7.6 95 194-297 3-102 (280)
99 3pp8_A Glyoxylate/hydroxypyruv 93.8 0.23 7.9E-06 53.1 10.4 147 135-296 58-232 (315)
100 1bgv_A Glutamate dehydrogenase 93.8 0.36 1.2E-05 54.0 12.1 119 172-296 208-350 (449)
101 1dxy_A D-2-hydroxyisocaproate 93.6 0.31 1.1E-05 52.4 10.9 120 161-296 90-236 (333)
102 2j6i_A Formate dehydrogenase; 93.5 0.47 1.6E-05 51.7 12.4 149 134-295 82-259 (364)
103 2d0i_A Dehydrogenase; structur 93.4 0.52 1.8E-05 50.6 12.4 142 135-294 63-236 (333)
104 3tnl_A Shikimate dehydrogenase 93.4 0.11 3.7E-06 55.7 6.9 149 109-274 63-238 (315)
105 3kb6_A D-lactate dehydrogenase 93.4 0.83 2.8E-05 49.1 13.8 118 162-294 87-231 (334)
106 1gdh_A D-glycerate dehydrogena 93.2 0.79 2.7E-05 48.9 13.3 120 162-294 90-239 (320)
107 4e5n_A Thermostable phosphite 93.0 0.45 1.5E-05 51.1 10.9 174 103-296 38-239 (330)
108 3gvx_A Glycerate dehydrogenase 93.0 0.45 1.5E-05 50.2 10.8 150 190-361 118-280 (290)
109 2yq5_A D-isomer specific 2-hyd 92.8 0.5 1.7E-05 51.0 11.1 120 161-296 92-239 (343)
110 3hg7_A D-isomer specific 2-hyd 92.8 0.33 1.1E-05 52.0 9.6 121 162-296 89-233 (324)
111 3kkj_A Amine oxidase, flavin-c 92.7 0.093 3.2E-06 50.8 4.8 31 196-229 4-34 (336)
112 1hyh_A L-hicdh, L-2-hydroxyiso 92.7 0.081 2.8E-06 56.0 4.6 94 195-297 2-126 (309)
113 4hy3_A Phosphoglycerate oxidor 92.6 0.46 1.6E-05 51.8 10.4 121 162-296 120-269 (365)
114 3phh_A Shikimate dehydrogenase 92.5 0.26 8.7E-06 51.6 8.0 98 179-295 107-212 (269)
115 3mw9_A GDH 1, glutamate dehydr 92.4 0.64 2.2E-05 52.5 11.5 111 185-302 233-355 (501)
116 3gt0_A Pyrroline-5-carboxylate 92.1 0.38 1.3E-05 48.8 8.6 94 195-297 3-101 (247)
117 3k96_A Glycerol-3-phosphate de 92.1 0.24 8.3E-06 53.7 7.5 92 194-296 29-136 (356)
118 1p77_A Shikimate 5-dehydrogena 92.1 0.16 5.5E-06 52.8 5.8 110 109-229 27-151 (272)
119 1mld_A Malate dehydrogenase; o 91.9 0.28 9.5E-06 52.3 7.6 96 196-301 2-125 (314)
120 2rcy_A Pyrroline carboxylate r 91.8 0.57 2E-05 47.6 9.6 88 194-297 4-95 (262)
121 1ygy_A PGDH, D-3-phosphoglycer 91.7 1.2 4.2E-05 50.8 13.1 171 103-294 37-233 (529)
122 1nyt_A Shikimate 5-dehydrogena 91.5 0.26 8.9E-06 51.1 6.7 111 110-229 28-151 (271)
123 1z82_A Glycerol-3-phosphate de 91.5 0.19 6.6E-06 53.5 5.9 91 194-296 14-114 (335)
124 1a5z_A L-lactate dehydrogenase 91.3 0.34 1.2E-05 51.5 7.6 93 196-297 2-120 (319)
125 3i83_A 2-dehydropantoate 2-red 91.3 0.16 5.3E-06 54.0 4.8 89 195-296 3-108 (320)
126 1txg_A Glycerol-3-phosphate de 91.2 0.21 7.3E-06 52.6 5.8 90 196-296 2-107 (335)
127 2izz_A Pyrroline-5-carboxylate 91.0 0.54 1.8E-05 49.9 8.7 98 192-297 20-122 (322)
128 2g1u_A Hypothetical protein TM 90.8 0.1 3.4E-06 49.2 2.5 37 190-229 15-51 (155)
129 1pzg_A LDH, lactate dehydrogen 90.6 0.33 1.1E-05 52.1 6.6 98 195-298 10-137 (331)
130 3ggo_A Prephenate dehydrogenas 90.6 0.57 1.9E-05 49.8 8.4 92 194-294 33-129 (314)
131 2g5c_A Prephenate dehydrogenas 90.3 0.53 1.8E-05 48.5 7.6 94 195-297 2-100 (281)
132 2i99_A MU-crystallin homolog; 90.1 2.3 7.8E-05 45.0 12.5 104 180-297 123-230 (312)
133 4huj_A Uncharacterized protein 90.1 0.42 1.4E-05 47.8 6.5 90 195-296 24-116 (220)
134 1id1_A Putative potassium chan 90.0 0.1 3.5E-06 48.9 1.8 34 193-229 2-35 (153)
135 3ado_A Lambda-crystallin; L-gu 89.8 0.35 1.2E-05 51.8 5.9 33 194-229 6-38 (319)
136 1bg6_A N-(1-D-carboxylethyl)-L 89.5 0.72 2.5E-05 49.0 8.1 89 195-294 5-110 (359)
137 4ej6_A Putative zinc-binding d 89.4 1.1 3.9E-05 48.2 9.7 106 169-289 159-280 (370)
138 3rui_A Ubiquitin-like modifier 89.3 0.22 7.6E-06 53.8 3.9 38 191-230 31-68 (340)
139 2ew2_A 2-dehydropantoate 2-red 89.2 0.23 7.9E-06 51.6 3.9 92 195-297 4-112 (316)
140 2dq4_A L-threonine 3-dehydroge 88.8 0.83 2.8E-05 48.6 8.0 54 171-228 143-197 (343)
141 3hdj_A Probable ornithine cycl 88.8 2.9 9.8E-05 44.4 12.2 97 193-304 120-227 (313)
142 2vns_A Metalloreductase steap3 88.8 0.6 2.1E-05 46.5 6.5 94 189-297 23-119 (215)
143 3grf_A Ornithine carbamoyltran 88.8 2.5 8.6E-05 45.3 11.7 169 124-304 88-296 (328)
144 3qsg_A NAD-binding phosphogluc 88.8 1.3 4.5E-05 46.7 9.5 91 194-297 24-121 (312)
145 1jay_A Coenzyme F420H2:NADP+ o 88.8 0.2 6.9E-06 49.3 2.9 91 196-297 2-101 (212)
146 3h8v_A Ubiquitin-like modifier 88.8 0.32 1.1E-05 51.4 4.6 39 190-230 32-70 (292)
147 1npy_A Hypothetical shikimate 88.7 0.58 2E-05 48.8 6.5 47 179-228 105-151 (271)
148 2zyd_A 6-phosphogluconate dehy 88.7 0.49 1.7E-05 53.4 6.4 97 191-298 12-118 (480)
149 2d8a_A PH0655, probable L-thre 88.6 0.75 2.6E-05 49.0 7.5 48 177-228 153-200 (348)
150 4b4u_A Bifunctional protein fo 88.6 1.1 3.6E-05 47.6 8.4 148 109-282 81-243 (303)
151 4e12_A Diketoreductase; oxidor 88.6 0.94 3.2E-05 47.0 8.1 32 195-229 5-36 (283)
152 3d1l_A Putative NADP oxidoredu 88.4 0.63 2.1E-05 47.5 6.5 96 191-297 7-106 (266)
153 2raf_A Putative dinucleotide-b 88.4 0.57 1.9E-05 46.5 6.0 76 190-296 15-93 (209)
154 2d4a_B Malate dehydrogenase; a 88.2 0.52 1.8E-05 50.0 5.9 98 196-300 1-123 (308)
155 1lld_A L-lactate dehydrogenase 88.1 0.44 1.5E-05 50.1 5.2 100 194-297 7-128 (319)
156 1hyu_A AHPF, alkyl hydroperoxi 88.1 0.28 9.5E-06 55.7 3.9 100 123-229 135-244 (521)
157 2hjr_A Malate dehydrogenase; m 88.1 0.43 1.5E-05 51.1 5.2 102 195-299 15-137 (328)
158 2f1k_A Prephenate dehydrogenas 88.0 0.91 3.1E-05 46.6 7.4 89 196-296 2-94 (279)
159 1vlv_A Otcase, ornithine carba 88.0 5.1 0.00017 42.9 13.4 153 139-304 116-298 (325)
160 4ep1_A Otcase, ornithine carba 87.9 5.3 0.00018 43.0 13.4 140 149-303 137-306 (340)
161 1duv_G Octase-1, ornithine tra 87.8 3.5 0.00012 44.2 12.1 135 125-271 88-233 (333)
162 1x0v_A GPD-C, GPDH-C, glycerol 87.8 0.7 2.4E-05 49.2 6.6 100 194-296 8-127 (354)
163 3ghy_A Ketopantoate reductase 87.8 0.88 3E-05 48.4 7.4 90 194-296 3-107 (335)
164 3pef_A 6-phosphogluconate dehy 87.7 0.55 1.9E-05 48.7 5.6 92 195-299 2-101 (287)
165 1zud_1 Adenylyltransferase THI 87.6 0.32 1.1E-05 50.0 3.7 38 191-230 25-62 (251)
166 2v6b_A L-LDH, L-lactate dehydr 87.6 0.14 4.9E-06 54.1 1.0 93 196-297 2-120 (304)
167 2i6u_A Otcase, ornithine carba 87.5 6.1 0.00021 41.9 13.5 144 148-304 105-278 (307)
168 1gtm_A Glutamate dehydrogenase 87.5 1.1 3.7E-05 49.8 8.1 131 100-234 86-251 (419)
169 1pvv_A Otcase, ornithine carba 87.5 5.9 0.0002 42.2 13.4 163 126-304 91-284 (315)
170 4fgw_A Glycerol-3-phosphate de 87.5 0.41 1.4E-05 52.7 4.5 85 195-284 35-138 (391)
171 1yj8_A Glycerol-3-phosphate de 87.1 0.55 1.9E-05 50.8 5.3 99 195-296 22-144 (375)
172 1t2d_A LDH-P, L-lactate dehydr 87.1 0.57 1.9E-05 50.0 5.3 98 195-299 5-132 (322)
173 1obb_A Maltase, alpha-glucosid 86.9 0.65 2.2E-05 52.4 5.9 118 194-316 3-174 (480)
174 2ewd_A Lactate dehydrogenase,; 86.9 0.56 1.9E-05 49.7 5.1 93 195-297 5-125 (317)
175 2ef0_A Ornithine carbamoyltran 86.8 11 0.00038 39.8 15.0 160 126-304 90-274 (301)
176 3hwr_A 2-dehydropantoate 2-red 86.8 0.82 2.8E-05 48.4 6.4 96 188-296 13-123 (318)
177 1jw9_B Molybdopterin biosynthe 86.8 0.32 1.1E-05 50.0 3.0 38 191-230 28-65 (249)
178 3fef_A Putative glucosidase LP 86.8 0.45 1.6E-05 53.3 4.5 71 192-267 3-80 (450)
179 2ahr_A Putative pyrroline carb 86.6 0.63 2.2E-05 47.3 5.2 90 195-296 4-93 (259)
180 3hn2_A 2-dehydropantoate 2-red 86.6 1.3 4.5E-05 46.6 7.8 96 195-296 3-106 (312)
181 1dxh_A Ornithine carbamoyltran 86.5 4.5 0.00015 43.5 11.9 123 139-271 103-233 (335)
182 1x7d_A Ornithine cyclodeaminas 86.1 1.5 5E-05 47.4 8.0 110 179-302 116-238 (350)
183 4hb9_A Similarities with proba 86.1 0.53 1.8E-05 50.2 4.5 32 195-229 2-33 (412)
184 1guz_A Malate dehydrogenase; o 86.0 0.75 2.6E-05 48.7 5.5 93 196-297 2-122 (310)
185 3c24_A Putative oxidoreductase 85.9 1 3.5E-05 46.6 6.5 89 195-297 12-105 (286)
186 1u8x_X Maltose-6'-phosphate gl 85.9 0.56 1.9E-05 52.9 4.7 102 194-299 28-177 (472)
187 3l6d_A Putative oxidoreductase 85.7 1.6 5.5E-05 45.8 7.9 97 191-300 6-108 (306)
188 4gbj_A 6-phosphogluconate dehy 85.6 0.8 2.7E-05 48.2 5.5 99 195-305 6-109 (297)
189 4ezb_A Uncharacterized conserv 85.5 1.1 3.8E-05 47.5 6.6 95 195-297 25-125 (317)
190 4e21_A 6-phosphogluconate dehy 85.5 1.8 6.3E-05 46.8 8.4 91 192-298 20-120 (358)
191 2uyy_A N-PAC protein; long-cha 85.4 1.1 3.9E-05 46.9 6.6 90 195-297 31-128 (316)
192 2h78_A Hibadh, 3-hydroxyisobut 85.4 1.5 5.2E-05 45.6 7.5 92 195-299 4-103 (302)
193 3d0o_A L-LDH 1, L-lactate dehy 85.4 0.66 2.2E-05 49.4 4.8 105 192-298 4-128 (317)
194 3u95_A Glycoside hydrolase, fa 85.4 0.82 2.8E-05 51.6 5.7 65 195-267 1-81 (477)
195 3nep_X Malate dehydrogenase; h 85.3 0.38 1.3E-05 51.4 2.8 105 195-301 1-126 (314)
196 4gsl_A Ubiquitin-like modifier 85.2 0.5 1.7E-05 54.7 3.9 38 191-230 323-360 (615)
197 1yb4_A Tartronic semialdehyde 85.0 1.3 4.6E-05 45.6 6.8 89 195-297 4-100 (295)
198 1s6y_A 6-phospho-beta-glucosid 84.9 0.72 2.5E-05 51.6 5.0 105 194-300 7-159 (450)
199 1yqd_A Sinapyl alcohol dehydro 84.9 2.7 9.3E-05 45.1 9.4 109 177-295 171-284 (366)
200 3csu_A Protein (aspartate carb 84.9 18 0.00062 38.3 15.5 135 123-271 85-230 (310)
201 1ml4_A Aspartate transcarbamoy 84.8 6.8 0.00023 41.6 12.2 130 126-271 90-230 (308)
202 2i6t_A Ubiquitin-conjugating e 84.8 1.9 6.5E-05 45.6 8.0 98 195-299 15-131 (303)
203 3vh1_A Ubiquitin-like modifier 84.8 0.47 1.6E-05 54.9 3.4 38 190-229 323-360 (598)
204 4dll_A 2-hydroxy-3-oxopropiona 84.4 1.5 5.1E-05 46.4 7.0 93 192-299 29-130 (320)
205 1ks9_A KPA reductase;, 2-dehyd 84.3 0.71 2.4E-05 47.3 4.3 92 196-296 2-100 (291)
206 2zqz_A L-LDH, L-lactate dehydr 84.2 1.9 6.6E-05 46.0 7.7 98 194-299 9-131 (326)
207 4a9w_A Monooxygenase; baeyer-v 84.2 0.78 2.7E-05 47.8 4.6 34 194-230 3-36 (357)
208 3d1c_A Flavin-containing putat 84.1 0.87 3E-05 48.1 5.0 36 193-230 3-38 (369)
209 3h5n_A MCCB protein; ubiquitin 83.9 0.58 2E-05 50.7 3.5 39 190-230 114-152 (353)
210 3b1f_A Putative prephenate deh 83.8 1.6 5.4E-05 45.1 6.7 94 194-296 6-104 (290)
211 3l4b_C TRKA K+ channel protien 83.8 0.63 2.2E-05 46.1 3.5 31 196-229 2-32 (218)
212 3oz2_A Digeranylgeranylglycero 83.7 0.87 3E-05 48.1 4.8 31 196-229 6-36 (397)
213 1o6z_A MDH, malate dehydrogena 83.7 1.6 5.4E-05 46.1 6.7 101 195-298 1-124 (303)
214 3pdu_A 3-hydroxyisobutyrate de 83.6 1.7 5.8E-05 44.9 6.9 90 195-297 2-99 (287)
215 3fbs_A Oxidoreductase; structu 83.4 0.98 3.3E-05 45.8 4.9 32 195-229 3-34 (297)
216 3f8d_A Thioredoxin reductase ( 83.4 1.1 3.7E-05 46.0 5.3 33 194-229 15-47 (323)
217 2xxj_A L-LDH, L-lactate dehydr 83.2 1.4 4.6E-05 46.8 6.0 98 195-300 1-123 (310)
218 1omo_A Alanine dehydrogenase; 82.9 4.6 0.00016 42.9 10.0 108 180-303 113-230 (322)
219 3m6i_A L-arabinitol 4-dehydrog 82.6 2.7 9.3E-05 44.8 8.2 62 163-228 151-212 (363)
220 3lzw_A Ferredoxin--NADP reduct 82.5 1.1 3.9E-05 46.1 5.0 33 194-229 7-39 (332)
221 3ip1_A Alcohol dehydrogenase, 82.4 5.7 0.00019 43.2 10.8 50 177-228 196-246 (404)
222 1y8q_A Ubiquitin-like 1 activa 82.3 0.75 2.6E-05 49.6 3.6 38 190-229 32-69 (346)
223 2w37_A Ornithine carbamoyltran 82.3 9.1 0.00031 41.5 12.0 120 139-271 125-254 (359)
224 3fpc_A NADP-dependent alcohol 82.1 2.4 8.3E-05 45.1 7.6 49 177-228 151-199 (352)
225 2zbw_A Thioredoxin reductase; 82.0 1.1 3.9E-05 46.5 4.8 34 194-230 5-38 (335)
226 3vrd_B FCCB subunit, flavocyto 82.0 1.1 3.8E-05 48.2 4.9 35 195-230 3-37 (401)
227 3alj_A 2-methyl-3-hydroxypyrid 82.0 1.1 3.6E-05 48.1 4.7 37 191-230 8-44 (379)
228 3itj_A Thioredoxin reductase 1 81.6 0.99 3.4E-05 46.7 4.2 33 194-229 22-54 (338)
229 2p4q_A 6-phosphogluconate dehy 81.6 2.9 9.9E-05 47.3 8.3 93 195-298 11-114 (497)
230 2dpo_A L-gulonate 3-dehydrogen 81.6 1.7 5.9E-05 46.2 6.1 33 194-229 6-38 (319)
231 3gvi_A Malate dehydrogenase; N 81.5 2 6.8E-05 45.9 6.5 106 192-301 5-132 (324)
232 1yqg_A Pyrroline-5-carboxylate 81.5 0.7 2.4E-05 46.9 2.9 90 196-297 2-92 (263)
233 3doj_A AT3G25530, dehydrogenas 81.4 1.7 5.9E-05 45.6 5.9 96 190-298 17-120 (310)
234 2pv7_A T-protein [includes: ch 81.4 2.6 8.8E-05 44.1 7.3 73 195-293 22-99 (298)
235 1evy_A Glycerol-3-phosphate de 81.3 0.81 2.8E-05 49.1 3.4 90 196-296 17-127 (366)
236 3p7m_A Malate dehydrogenase; p 81.3 1.3 4.6E-05 47.2 5.1 103 193-297 4-126 (321)
237 1ez4_A Lactate dehydrogenase; 81.1 0.93 3.2E-05 48.3 3.8 98 195-300 6-128 (318)
238 2ywl_A Thioredoxin reductase r 80.9 1.5 5.2E-05 41.4 4.9 32 195-229 2-33 (180)
239 1vpd_A Tartronate semialdehyde 80.9 2.7 9.1E-05 43.4 7.1 90 195-297 6-103 (299)
240 3tl2_A Malate dehydrogenase; c 80.8 1.3 4.5E-05 47.2 4.8 107 192-301 6-135 (315)
241 3cgv_A Geranylgeranyl reductas 80.8 1.1 3.9E-05 47.6 4.3 35 193-230 3-37 (397)
242 2cvz_A Dehydrogenase, 3-hydrox 80.7 1.6 5.4E-05 44.8 5.3 88 196-297 3-94 (289)
243 2yjz_A Metalloreductase steap4 81.7 0.32 1.1E-05 48.2 0.0 91 192-297 17-109 (201)
244 3dme_A Conserved exported prot 80.7 1.5 5.2E-05 45.8 5.3 33 194-229 4-36 (369)
245 2hmt_A YUAA protein; RCK, KTN, 80.5 1.3 4.4E-05 39.9 4.1 35 192-229 4-38 (144)
246 2ph5_A Homospermidine synthase 80.4 3.1 0.00011 46.8 7.8 95 194-294 13-115 (480)
247 1ldn_A L-lactate dehydrogenase 80.4 2.1 7.2E-05 45.4 6.2 104 195-300 7-130 (316)
248 2jae_A L-amino acid oxidase; o 80.3 1.4 4.6E-05 48.9 4.9 42 187-231 4-45 (489)
249 3uko_A Alcohol dehydrogenase c 80.1 4 0.00014 43.9 8.5 45 182-228 182-226 (378)
250 1yvv_A Amine oxidase, flavin-c 80.0 1.5 5.1E-05 45.5 4.9 32 195-229 3-34 (336)
251 2vou_A 2,6-dihydroxypyridine h 80.0 1.5 5.1E-05 47.3 5.0 35 193-230 4-38 (397)
252 2x3n_A Probable FAD-dependent 79.9 1.5 5E-05 47.2 4.9 34 194-230 6-39 (399)
253 3ab1_A Ferredoxin--NADP reduct 79.9 1.7 5.7E-05 46.0 5.3 35 193-230 13-47 (360)
254 1ur5_A Malate dehydrogenase; o 79.9 1.2 4.1E-05 47.1 4.1 95 195-299 3-125 (309)
255 3cty_A Thioredoxin reductase; 79.8 1.5 5.1E-05 45.4 4.8 33 194-229 16-48 (319)
256 3rp8_A Flavoprotein monooxygen 79.8 1.3 4.6E-05 47.7 4.6 36 192-230 21-56 (407)
257 1ryi_A Glycine oxidase; flavop 79.7 1.5 5.2E-05 46.5 4.9 34 194-230 17-50 (382)
258 3c96_A Flavin-containing monoo 79.7 1.5 5.1E-05 47.5 4.9 35 194-230 4-38 (410)
259 1y6j_A L-lactate dehydrogenase 79.6 7.4 0.00025 41.2 10.2 95 195-297 8-127 (318)
260 4gwg_A 6-phosphogluconate dehy 79.6 2.8 9.6E-05 47.3 7.2 93 194-297 4-107 (484)
261 2q7v_A Thioredoxin reductase; 79.5 1.6 5.5E-05 45.3 4.9 33 194-229 8-40 (325)
262 2xdo_A TETX2 protein; tetracyc 79.5 1.3 4.5E-05 47.8 4.4 36 192-230 24-59 (398)
263 1tt5_B Ubiquitin-activating en 79.4 1.2 4E-05 49.7 3.9 38 190-229 36-73 (434)
264 3fi9_A Malate dehydrogenase; s 79.2 0.81 2.8E-05 49.4 2.6 104 192-298 6-131 (343)
265 2q0l_A TRXR, thioredoxin reduc 79.0 1.8 6E-05 44.5 5.0 33 195-229 2-34 (311)
266 1y56_B Sarcosine oxidase; dehy 78.9 1.6 5.6E-05 46.3 4.8 34 194-230 5-38 (382)
267 3llv_A Exopolyphosphatase-rela 78.9 1.9 6.5E-05 39.3 4.6 33 193-228 5-37 (141)
268 3fg2_P Putative rubredoxin red 78.8 1.6 5.6E-05 47.3 4.9 37 195-232 2-38 (404)
269 3r9u_A Thioredoxin reductase; 78.7 1.5 5.1E-05 44.9 4.3 33 194-229 4-37 (315)
270 3nix_A Flavoprotein/dehydrogen 78.7 1.4 4.9E-05 47.4 4.4 34 194-230 5-38 (421)
271 1f8f_A Benzyl alcohol dehydrog 78.7 4.1 0.00014 43.6 8.0 50 177-228 174-223 (371)
272 2cul_A Glucose-inhibited divis 78.7 1.8 6.1E-05 43.2 4.8 33 194-229 3-35 (232)
273 3cky_A 2-hydroxymethyl glutara 78.6 3.6 0.00012 42.5 7.2 88 195-297 5-102 (301)
274 3k7m_X 6-hydroxy-L-nicotine ox 78.6 1.8 6.3E-05 46.8 5.2 33 195-230 2-34 (431)
275 1e3j_A NADP(H)-dependent ketos 78.6 6.8 0.00023 41.5 9.6 54 171-228 147-200 (352)
276 1zq6_A Otcase, ornithine carba 78.5 17 0.00057 39.4 12.5 114 147-271 145-274 (359)
277 1np3_A Ketol-acid reductoisome 78.4 2.5 8.5E-05 45.2 6.1 84 192-290 14-104 (338)
278 1lss_A TRK system potassium up 78.4 1.9 6.5E-05 38.6 4.4 33 194-229 4-36 (140)
279 2gf3_A MSOX, monomeric sarcosi 78.1 1.9 6.7E-05 45.7 5.1 35 194-231 3-37 (389)
280 1trb_A Thioredoxin reductase; 78.1 1.2 4.2E-05 45.9 3.4 34 193-229 4-37 (320)
281 1smk_A Malate dehydrogenase, g 78.0 3.7 0.00013 43.7 7.3 97 195-301 9-133 (326)
282 2iz1_A 6-phosphogluconate dehy 77.9 3.6 0.00012 46.2 7.4 93 194-297 5-107 (474)
283 2vdc_G Glutamate synthase [NAD 77.8 1.7 5.9E-05 48.4 4.8 34 193-229 121-154 (456)
284 3uox_A Otemo; baeyer-villiger 77.8 2.1 7.2E-05 48.8 5.6 36 192-230 7-42 (545)
285 3i3l_A Alkylhalidase CMLS; fla 77.7 2.8 9.5E-05 48.4 6.6 38 192-232 21-58 (591)
286 4gcm_A TRXR, thioredoxin reduc 77.7 1.9 6.4E-05 44.6 4.7 32 195-229 7-38 (312)
287 3ldh_A Lactate dehydrogenase; 77.7 0.88 3E-05 48.9 2.2 102 193-297 20-142 (330)
288 3g0o_A 3-hydroxyisobutyrate de 77.6 3 0.0001 43.5 6.3 91 194-297 7-106 (303)
289 3r7f_A Aspartate carbamoyltran 77.6 26 0.0009 37.0 13.5 111 140-270 96-211 (304)
290 1oju_A MDH, malate dehydrogena 77.6 2 6.8E-05 45.3 4.9 101 195-297 1-122 (294)
291 4a2c_A Galactitol-1-phosphate 77.4 9.8 0.00033 40.0 10.4 56 170-228 138-193 (346)
292 2oln_A NIKD protein; flavoprot 77.4 1.9 6.4E-05 46.2 4.8 35 194-231 4-38 (397)
293 3ic5_A Putative saccharopine d 77.4 2.4 8.1E-05 36.7 4.6 34 194-229 5-38 (118)
294 2z2v_A Hypothetical protein PH 77.4 2 6.8E-05 46.6 5.0 90 193-294 15-109 (365)
295 3gd5_A Otcase, ornithine carba 77.4 29 0.001 37.0 13.9 165 124-304 91-286 (323)
296 2uzz_A N-methyl-L-tryptophan o 77.2 1.9 6.4E-05 45.6 4.7 34 195-231 3-36 (372)
297 3iwa_A FAD-dependent pyridine 77.2 1.5 5.1E-05 48.7 4.0 36 194-232 3-40 (472)
298 3c85_A Putative glutathione-re 77.0 2.2 7.6E-05 40.7 4.7 36 191-229 36-72 (183)
299 1k0i_A P-hydroxybenzoate hydro 77.0 1.8 6.1E-05 46.3 4.5 33 195-230 3-35 (394)
300 3fwz_A Inner membrane protein 76.9 2.4 8.3E-05 38.9 4.8 32 195-229 8-39 (140)
301 1vdc_A NTR, NADPH dependent th 76.9 1.8 6E-05 45.0 4.3 33 193-228 7-39 (333)
302 1p0f_A NADP-dependent alcohol 76.8 6.3 0.00022 42.2 8.8 35 192-228 190-224 (373)
303 3uog_A Alcohol dehydrogenase; 76.7 8.2 0.00028 41.2 9.6 46 180-228 176-221 (363)
304 3lxd_A FAD-dependent pyridine 76.7 2.1 7.3E-05 46.4 5.0 38 193-231 8-45 (415)
305 3v76_A Flavoprotein; structura 76.6 2 6.8E-05 47.3 4.8 34 194-230 27-60 (417)
306 3c7a_A Octopine dehydrogenase; 76.5 2.8 9.6E-05 45.5 5.9 97 195-295 3-118 (404)
307 3axb_A Putative oxidoreductase 76.3 1.7 5.7E-05 47.6 4.0 37 189-228 18-55 (448)
308 2gv8_A Monooxygenase; FMO, FAD 76.1 1.8 6.1E-05 47.6 4.3 36 193-229 5-40 (447)
309 2xve_A Flavin-containing monoo 76.0 2.3 7.8E-05 47.3 5.1 35 195-229 3-40 (464)
310 2r9z_A Glutathione amide reduc 76.0 2.3 8E-05 47.1 5.2 33 194-229 4-36 (463)
311 4ap3_A Steroid monooxygenase; 76.0 2.1 7.3E-05 48.8 5.0 35 193-230 20-54 (549)
312 2qa2_A CABE, polyketide oxygen 75.9 2.3 7.9E-05 47.8 5.1 35 193-230 11-45 (499)
313 1b8p_A Protein (malate dehydro 75.9 5.7 0.00019 42.2 8.0 102 194-297 5-137 (329)
314 2fzw_A Alcohol dehydrogenase c 75.9 6.5 0.00022 42.0 8.5 46 181-228 178-223 (373)
315 1c0p_A D-amino acid oxidase; a 75.7 2.3 7.8E-05 45.0 4.8 34 194-230 6-39 (363)
316 2qyt_A 2-dehydropantoate 2-red 75.4 2.5 8.5E-05 43.9 4.9 91 195-296 9-120 (317)
317 2a87_A TRXR, TR, thioredoxin r 75.4 2.1 7.2E-05 44.7 4.4 34 193-229 13-46 (335)
318 4a5l_A Thioredoxin reductase; 75.4 2 6.9E-05 44.0 4.2 31 196-229 6-36 (314)
319 1zk7_A HGII, reductase, mercur 75.3 2.2 7.4E-05 47.3 4.7 33 194-229 4-36 (467)
320 1y8q_B Anthracycline-, ubiquit 75.1 1.4 4.6E-05 51.5 3.0 38 191-230 14-51 (640)
321 1fl2_A Alkyl hydroperoxide red 75.1 2.4 8.1E-05 43.5 4.6 32 195-229 2-33 (310)
322 2a8x_A Dihydrolipoyl dehydroge 75.0 2.2 7.5E-05 47.2 4.6 33 194-229 3-35 (464)
323 2eq6_A Pyruvate dehydrogenase 74.9 2.2 7.4E-05 47.4 4.5 35 193-230 5-39 (464)
324 3h8l_A NADH oxidase; membrane 74.9 2 6.7E-05 46.5 4.1 34 195-231 2-38 (409)
325 2qae_A Lipoamide, dihydrolipoy 74.8 2.6 8.9E-05 46.6 5.2 33 194-229 2-34 (468)
326 3vku_A L-LDH, L-lactate dehydr 74.8 1.5 5.2E-05 46.9 3.1 103 193-297 8-129 (326)
327 2gag_B Heterotetrameric sarcos 74.8 2.4 8.2E-05 45.2 4.7 34 194-230 21-56 (405)
328 2hqm_A GR, grase, glutathione 74.8 2.3 7.9E-05 47.3 4.8 34 193-229 10-43 (479)
329 3urh_A Dihydrolipoyl dehydroge 74.6 2.4 8.2E-05 47.3 4.8 34 194-230 25-58 (491)
330 3dje_A Fructosyl amine: oxygen 74.6 2.5 8.6E-05 45.9 4.9 36 194-231 6-41 (438)
331 4eqs_A Coenzyme A disulfide re 74.6 2.2 7.4E-05 47.1 4.4 34 196-230 2-35 (437)
332 3qha_A Putative oxidoreductase 74.1 5 0.00017 41.8 6.8 91 194-298 15-110 (296)
333 1w4x_A Phenylacetone monooxyge 74.1 2.8 9.7E-05 47.5 5.3 36 192-230 14-49 (542)
334 1cdo_A Alcohol dehydrogenase; 74.1 8.6 0.00029 41.1 8.9 35 192-228 191-225 (374)
335 2qa1_A PGAE, polyketide oxygen 74.1 2.4 8.3E-05 47.7 4.7 36 192-230 9-44 (500)
336 3ka7_A Oxidoreductase; structu 73.7 2.5 8.4E-05 45.6 4.5 32 196-230 2-33 (425)
337 3hyw_A Sulfide-quinone reducta 73.6 2.6 9E-05 46.2 4.8 35 195-230 3-37 (430)
338 2yqu_A 2-oxoglutarate dehydrog 73.6 2.8 9.7E-05 46.1 5.1 32 195-229 2-33 (455)
339 1rjw_A ADH-HT, alcohol dehydro 73.5 7.8 0.00027 40.9 8.3 45 180-228 152-196 (339)
340 3nrn_A Uncharacterized protein 73.4 2.6 9E-05 45.6 4.7 33 196-231 2-34 (421)
341 3ef6_A Toluene 1,2-dioxygenase 73.4 2.8 9.7E-05 45.5 4.9 41 195-236 3-43 (410)
342 2cf5_A Atccad5, CAD, cinnamyl 73.4 5.9 0.0002 42.2 7.4 47 179-228 166-212 (357)
343 3ego_A Probable 2-dehydropanto 73.3 2.8 9.7E-05 44.0 4.7 89 195-296 3-102 (307)
344 1mo9_A ORF3; nucleotide bindin 73.3 2.7 9.2E-05 47.4 4.9 35 193-230 42-76 (523)
345 1dxl_A Dihydrolipoamide dehydr 73.3 2.6 8.9E-05 46.5 4.7 33 194-229 6-38 (470)
346 2eih_A Alcohol dehydrogenase; 73.1 13 0.00045 39.1 10.0 49 177-228 150-199 (343)
347 3dfz_A SIRC, precorrin-2 dehyd 73.0 2.8 9.7E-05 42.4 4.4 35 191-228 28-62 (223)
348 3ihm_A Styrene monooxygenase A 72.9 2.3 8E-05 46.6 4.1 32 195-229 23-54 (430)
349 3ihg_A RDME; flavoenzyme, anth 72.9 2.7 9.2E-05 47.3 4.8 37 193-232 4-40 (535)
350 1mv8_A GMD, GDP-mannose 6-dehy 72.9 9.2 0.00032 42.1 9.0 31 196-229 2-32 (436)
351 2e1m_A L-glutamate oxidase; L- 72.8 2.9 9.9E-05 45.6 4.8 35 192-229 42-76 (376)
352 1rsg_A FMS1 protein; FAD bindi 72.7 2.6 9E-05 47.2 4.6 37 192-230 6-42 (516)
353 1pgj_A 6PGDH, 6-PGDH, 6-phosph 72.7 6.9 0.00024 43.9 8.0 92 195-297 2-107 (478)
354 2qcu_A Aerobic glycerol-3-phos 72.6 2.9 0.0001 46.8 5.0 34 194-230 3-36 (501)
355 3tpf_A Otcase, ornithine carba 72.6 27 0.00092 36.9 12.0 109 149-271 103-223 (307)
356 1ges_A Glutathione reductase; 72.6 2.5 8.5E-05 46.7 4.3 33 194-229 4-36 (450)
357 1piw_A Hypothetical zinc-type 72.4 12 0.00042 39.7 9.6 83 179-272 166-253 (360)
358 3c4a_A Probable tryptophan hyd 72.4 2.6 8.8E-05 45.2 4.2 31 196-229 2-34 (381)
359 1zmd_A Dihydrolipoyl dehydroge 72.3 3 0.0001 46.2 4.9 34 194-230 6-39 (474)
360 3ics_A Coenzyme A-disulfide re 72.3 2.7 9.2E-05 48.0 4.6 37 193-232 35-73 (588)
361 3kd9_A Coenzyme A disulfide re 72.2 2.7 9.4E-05 46.2 4.5 37 194-231 3-39 (449)
362 4a7p_A UDP-glucose dehydrogena 72.1 15 0.0005 41.0 10.4 95 188-294 316-423 (446)
363 3qj4_A Renalase; FAD/NAD(P)-bi 72.1 2.1 7E-05 45.0 3.3 32 195-229 2-36 (342)
364 3l9w_A Glutathione-regulated p 72.1 3.1 0.00011 45.9 4.9 32 195-229 5-36 (413)
365 3o0h_A Glutathione reductase; 71.9 3.5 0.00012 45.9 5.3 33 194-229 26-58 (484)
366 1pqw_A Polyketide synthase; ro 71.8 5.9 0.0002 38.1 6.3 58 168-228 12-71 (198)
367 1ebd_A E3BD, dihydrolipoamide 71.6 2.9 9.9E-05 46.1 4.5 32 195-229 4-35 (455)
368 1rp0_A ARA6, thiazole biosynth 71.4 2.9 0.0001 43.1 4.2 35 193-230 38-73 (284)
369 2gqf_A Hypothetical protein HI 71.4 2.6 8.7E-05 46.1 4.0 33 194-229 4-36 (401)
370 3gg2_A Sugar dehydrogenase, UD 71.3 10 0.00035 42.2 8.9 93 196-293 4-122 (450)
371 4eez_A Alcohol dehydrogenase 1 71.3 11 0.00038 39.6 8.9 49 177-228 148-196 (348)
372 3l8k_A Dihydrolipoyl dehydroge 71.2 3.5 0.00012 45.6 5.1 34 194-230 4-37 (466)
373 3s5w_A L-ornithine 5-monooxyge 71.2 2.2 7.5E-05 46.8 3.4 37 194-230 30-68 (463)
374 1onf_A GR, grase, glutathione 71.2 3.1 0.00011 46.6 4.7 33 195-230 3-35 (500)
375 4gx0_A TRKA domain protein; me 71.2 4.6 0.00016 46.0 6.2 91 195-294 349-443 (565)
376 2vvm_A Monoamine oxidase N; FA 71.1 3.7 0.00013 45.4 5.3 33 195-230 40-72 (495)
377 1vj0_A Alcohol dehydrogenase, 71.1 5.3 0.00018 43.0 6.4 56 171-228 173-228 (380)
378 4ekn_B Aspartate carbamoyltran 71.0 26 0.00087 37.1 11.4 117 140-271 100-227 (306)
379 2pgd_A 6-phosphogluconate dehy 71.0 8.1 0.00028 43.3 8.1 92 195-297 3-105 (482)
380 1s3e_A Amine oxidase [flavin-c 70.9 3.4 0.00012 46.2 5.0 36 194-232 4-39 (520)
381 2bry_A NEDD9 interacting prote 70.9 3.1 0.00011 46.7 4.7 36 193-231 91-126 (497)
382 4g65_A TRK system potassium up 70.9 1.4 4.9E-05 49.3 1.8 89 195-293 4-102 (461)
383 3h28_A Sulfide-quinone reducta 70.8 3.1 0.00011 45.4 4.5 34 195-231 3-38 (430)
384 3klj_A NAD(FAD)-dependent dehy 70.8 2.5 8.6E-05 45.8 3.7 37 193-232 8-44 (385)
385 3oc4_A Oxidoreductase, pyridin 70.7 2.8 9.7E-05 46.1 4.2 34 195-231 3-38 (452)
386 3c4n_A Uncharacterized protein 70.6 3.5 0.00012 44.6 4.9 33 195-230 37-71 (405)
387 1v59_A Dihydrolipoamide dehydr 70.6 3.7 0.00013 45.5 5.1 34 194-230 5-38 (478)
388 4fk1_A Putative thioredoxin re 70.6 3.9 0.00013 42.1 5.0 34 193-229 5-38 (304)
389 1oth_A Protein (ornithine tran 70.5 51 0.0017 35.0 13.7 117 140-270 105-231 (321)
390 3e1t_A Halogenase; flavoprotei 70.5 3.1 0.00011 46.7 4.5 36 193-231 6-41 (512)
391 2gqw_A Ferredoxin reductase; f 70.4 3.6 0.00012 44.8 4.9 38 194-232 7-44 (408)
392 2gf2_A Hibadh, 3-hydroxyisobut 70.3 5.7 0.00019 40.8 6.2 89 196-297 2-98 (296)
393 2b9w_A Putative aminooxidase; 70.3 3.8 0.00013 44.2 5.0 36 193-230 5-40 (424)
394 3gwf_A Cyclohexanone monooxyge 70.3 2.9 0.0001 47.6 4.3 35 193-230 7-42 (540)
395 4g6h_A Rotenone-insensitive NA 70.2 1.8 6E-05 48.9 2.4 32 195-229 43-74 (502)
396 4dgk_A Phytoene dehydrogenase; 70.1 3.2 0.00011 45.9 4.4 32 195-229 2-33 (501)
397 1xhc_A NADH oxidase /nitrite r 70.1 2.5 8.6E-05 45.4 3.5 34 195-232 9-42 (367)
398 2r0c_A REBC; flavin adenine di 69.9 3.4 0.00012 46.9 4.8 34 194-230 26-59 (549)
399 3ktd_A Prephenate dehydrogenas 69.9 3.9 0.00013 44.0 4.9 83 195-293 9-101 (341)
400 3lk7_A UDP-N-acetylmuramoylala 69.9 3.5 0.00012 45.8 4.7 36 191-229 6-41 (451)
401 1pl8_A Human sorbitol dehydrog 69.8 7 0.00024 41.6 6.9 55 171-228 150-204 (356)
402 2yg5_A Putrescine oxidase; oxi 69.8 3.5 0.00012 45.0 4.6 35 194-231 5-39 (453)
403 2e4g_A Tryptophan halogenase; 69.7 3.3 0.00011 47.0 4.6 34 194-230 25-61 (550)
404 1hye_A L-lactate/malate dehydr 69.6 3.2 0.00011 43.8 4.2 99 196-297 2-126 (313)
405 3atr_A Conserved archaeal prot 69.6 2.3 8E-05 46.8 3.2 33 195-230 7-39 (453)
406 3k30_A Histamine dehydrogenase 69.4 3.3 0.00011 48.5 4.6 34 194-230 391-424 (690)
407 2x0j_A Malate dehydrogenase; o 69.3 2.4 8.2E-05 44.7 3.1 111 195-307 1-131 (294)
408 3cgb_A Pyridine nucleotide-dis 69.2 3.3 0.00011 46.1 4.3 35 195-232 37-73 (480)
409 1tt5_A APPBP1, amyloid protein 69.2 2.1 7.2E-05 48.9 2.8 39 190-230 28-66 (531)
410 2aqj_A Tryptophan halogenase, 69.2 3.5 0.00012 46.6 4.6 34 194-230 5-41 (538)
411 2i0z_A NAD(FAD)-utilizing dehy 69.2 3.8 0.00013 45.2 4.8 33 195-230 27-59 (447)
412 1ojt_A Surface protein; redox- 69.0 4 0.00014 45.3 5.0 34 194-230 6-39 (482)
413 2weu_A Tryptophan 5-halogenase 68.7 2.8 9.6E-05 46.8 3.6 33 195-230 3-38 (511)
414 1qor_A Quinone oxidoreductase; 68.7 12 0.00041 39.0 8.4 50 176-228 123-173 (327)
415 3s2e_A Zinc-containing alcohol 68.6 10 0.00036 39.8 7.9 45 180-228 154-198 (340)
416 1i36_A Conserved hypothetical 68.5 3.4 0.00012 41.9 3.9 88 196-297 2-92 (264)
417 3ntd_A FAD-dependent pyridine 68.4 3.4 0.00011 46.8 4.2 37 195-232 2-38 (565)
418 1hdo_A Biliverdin IX beta redu 68.1 7.7 0.00026 36.8 6.2 71 194-271 3-76 (206)
419 2v3a_A Rubredoxin reductase; a 68.0 4 0.00014 43.8 4.5 35 194-229 4-38 (384)
420 3sx6_A Sulfide-quinone reducta 68.0 3.4 0.00011 45.3 4.0 33 195-230 5-40 (437)
421 2pyx_A Tryptophan halogenase; 67.9 3.6 0.00012 46.3 4.4 34 194-230 7-52 (526)
422 2bi7_A UDP-galactopyranose mut 67.8 3.6 0.00012 44.5 4.2 34 193-229 2-35 (384)
423 1lqt_A FPRA; NADP+ derivative, 67.7 3.3 0.00011 46.0 3.9 34 193-229 2-42 (456)
424 2wpf_A Trypanothione reductase 67.6 4.4 0.00015 45.3 5.0 31 194-227 7-38 (495)
425 3lad_A Dihydrolipoamide dehydr 67.6 3.9 0.00013 45.2 4.5 33 194-229 3-35 (476)
426 4dna_A Probable glutathione re 67.4 4.3 0.00015 44.8 4.8 33 194-229 5-37 (463)
427 1lvl_A Dihydrolipoamide dehydr 67.4 3.7 0.00013 45.4 4.2 33 194-229 5-37 (458)
428 3fpz_A Thiazole biosynthetic e 67.3 3.7 0.00013 43.0 4.0 35 192-229 63-99 (326)
429 1uuf_A YAHK, zinc-type alcohol 67.3 11 0.00039 40.3 8.0 47 178-228 180-226 (369)
430 4h31_A Otcase, ornithine carba 67.3 64 0.0022 34.8 13.8 113 149-270 137-258 (358)
431 1iz0_A Quinone oxidoreductase; 67.2 4.7 0.00016 41.8 4.8 96 177-285 110-210 (302)
432 3abi_A Putative uncharacterize 67.2 5 0.00017 43.1 5.1 109 195-316 17-133 (365)
433 2b5w_A Glucose dehydrogenase; 67.0 2.3 7.9E-05 45.4 2.4 34 193-228 172-207 (357)
434 3dk9_A Grase, GR, glutathione 66.9 4.3 0.00015 45.0 4.6 34 193-229 19-52 (478)
435 1o94_A Tmadh, trimethylamine d 66.8 4.2 0.00014 48.0 4.8 34 194-230 389-422 (729)
436 2ivd_A PPO, PPOX, protoporphyr 66.7 3.9 0.00013 44.9 4.3 34 194-230 16-49 (478)
437 1q1r_A Putidaredoxin reductase 66.7 5.1 0.00018 43.9 5.2 37 194-231 4-40 (431)
438 3qwb_A Probable quinone oxidor 66.7 18 0.00063 37.8 9.3 44 182-228 137-181 (334)
439 2cdu_A NADPH oxidase; flavoenz 66.5 3.9 0.00013 45.0 4.2 32 196-230 2-35 (452)
440 3lov_A Protoporphyrinogen oxid 66.4 4.7 0.00016 44.2 4.8 36 194-230 4-39 (475)
441 3hdq_A UDP-galactopyranose mut 66.4 5.5 0.00019 43.7 5.3 34 193-229 28-61 (397)
442 2rgh_A Alpha-glycerophosphate 66.3 4.9 0.00017 46.0 5.1 34 194-230 32-65 (571)
443 3nyc_A D-arginine dehydrogenas 66.3 3.3 0.00011 43.6 3.4 32 194-229 9-40 (381)
444 1xdi_A RV3303C-LPDA; reductase 66.2 3.5 0.00012 46.1 3.8 33 195-230 3-38 (499)
445 1nhp_A NADH peroxidase; oxidor 65.7 4.1 0.00014 44.7 4.1 33 196-231 2-36 (447)
446 1pg5_A Aspartate carbamoyltran 65.5 47 0.0016 34.9 12.0 113 140-271 98-222 (299)
447 3nlc_A Uncharacterized protein 65.5 3.6 0.00012 47.1 3.7 33 194-229 107-139 (549)
448 3two_A Mannitol dehydrogenase; 65.4 19 0.00064 38.0 9.2 44 181-228 165-208 (348)
449 1m6i_A Programmed cell death p 65.2 4.1 0.00014 45.6 4.1 38 193-231 10-47 (493)
450 1f0y_A HCDH, L-3-hydroxyacyl-C 65.2 5 0.00017 41.7 4.5 32 195-229 16-47 (302)
451 2zxi_A TRNA uridine 5-carboxym 65.1 4.4 0.00015 47.3 4.4 33 194-229 27-59 (637)
452 3fmw_A Oxygenase; mithramycin, 65.1 4.9 0.00017 46.1 4.7 35 194-231 49-83 (570)
453 2bc0_A NADH oxidase; flavoprot 65.0 3.7 0.00013 45.8 3.7 37 194-230 35-71 (490)
454 2x8g_A Thioredoxin glutathione 64.9 5.5 0.00019 45.6 5.2 33 193-228 106-138 (598)
455 3pid_A UDP-glucose 6-dehydroge 64.9 8.5 0.00029 42.7 6.5 41 185-229 27-67 (432)
456 1v0j_A UDP-galactopyranose mut 64.8 5.4 0.00019 43.3 4.9 33 194-229 7-40 (399)
457 2o7s_A DHQ-SDH PR, bifunctiona 64.8 4.3 0.00015 46.1 4.1 36 191-229 361-396 (523)
458 1kyq_A Met8P, siroheme biosynt 64.6 3.5 0.00012 43.1 3.1 36 191-229 10-45 (274)
459 3nks_A Protoporphyrinogen oxid 64.6 4.4 0.00015 44.4 4.1 35 195-230 3-37 (477)
460 3jv7_A ADH-A; dehydrogenase, n 64.6 9.4 0.00032 40.2 6.6 47 180-228 157-204 (345)
461 4ina_A Saccharopine dehydrogen 64.6 5.4 0.00018 43.7 4.8 91 195-294 2-108 (405)
462 1gte_A Dihydropyrimidine dehyd 64.5 4.6 0.00016 49.7 4.6 34 194-229 187-220 (1025)
463 2bcg_G Secretory pathway GDP d 64.5 5.4 0.00018 44.0 4.8 36 193-231 10-45 (453)
464 3g3e_A D-amino-acid oxidase; F 64.3 3.9 0.00013 43.0 3.5 35 196-230 2-39 (351)
465 3pvc_A TRNA 5-methylaminomethy 64.2 4.4 0.00015 47.4 4.3 33 195-230 265-297 (689)
466 3cmm_A Ubiquitin-activating en 63.8 3.9 0.00013 50.2 3.8 38 190-229 23-60 (1015)
467 3i6d_A Protoporphyrinogen oxid 63.8 3.5 0.00012 44.9 3.1 35 195-229 6-43 (470)
468 3ic9_A Dihydrolipoamide dehydr 63.6 4.7 0.00016 45.1 4.1 32 195-229 9-40 (492)
469 1y0p_A Fumarate reductase flav 63.5 5.7 0.0002 45.2 4.9 39 191-232 123-161 (571)
470 1fec_A Trypanothione reductase 63.1 6.2 0.00021 44.0 5.1 31 194-227 3-34 (490)
471 1cjc_A Protein (adrenodoxin re 63.0 5.4 0.00018 44.4 4.5 35 194-229 6-40 (460)
472 2zb4_A Prostaglandin reductase 62.9 9.3 0.00032 40.5 6.2 55 172-228 137-194 (357)
473 1pn0_A Phenol 2-monooxygenase; 62.7 5.3 0.00018 46.7 4.5 46 194-242 8-59 (665)
474 3pi7_A NADH oxidoreductase; gr 62.6 15 0.0005 38.8 7.7 91 183-285 155-255 (349)
475 1ps9_A 2,4-dienoyl-COA reducta 62.5 4.9 0.00017 46.8 4.2 34 194-230 373-406 (671)
476 2iid_A L-amino-acid oxidase; f 62.4 5.8 0.0002 43.9 4.6 34 194-230 33-66 (498)
477 2x5o_A UDP-N-acetylmuramoylala 62.2 4.6 0.00016 44.6 3.8 36 192-230 3-38 (439)
478 3ps9_A TRNA 5-methylaminomethy 62.2 5 0.00017 46.7 4.2 33 195-230 273-305 (676)
479 1i8t_A UDP-galactopyranose mut 62.1 5.7 0.00019 42.6 4.3 32 195-229 2-33 (367)
480 3qfa_A Thioredoxin reductase 1 62.1 6.7 0.00023 44.1 5.1 34 193-229 31-64 (519)
481 2nvu_B Maltose binding protein 62.0 3.7 0.00013 49.1 3.1 36 193-230 410-445 (805)
482 4amu_A Ornithine carbamoyltran 62.0 73 0.0025 34.5 12.9 111 149-271 138-260 (365)
483 3qy9_A DHPR, dihydrodipicolina 61.9 12 0.0004 38.3 6.4 77 195-290 4-81 (243)
484 3da1_A Glycerol-3-phosphate de 61.4 6.4 0.00022 45.0 4.8 35 193-230 17-51 (561)
485 2dkh_A 3-hydroxybenzoate hydro 61.3 4.8 0.00016 46.7 3.8 34 194-230 32-66 (639)
486 1wly_A CAAR, 2-haloacrylate re 61.3 12 0.0004 39.3 6.6 51 175-228 127-178 (333)
487 1y7t_A Malate dehydrogenase; N 61.1 3.8 0.00013 43.3 2.7 101 195-296 5-133 (327)
488 4gde_A UDP-galactopyranose mut 61.1 6.1 0.00021 43.6 4.5 33 194-229 10-43 (513)
489 3dfu_A Uncharacterized protein 61.0 16 0.00055 37.1 7.2 72 192-297 4-79 (232)
490 3sds_A Ornithine carbamoyltran 60.5 98 0.0034 33.3 13.6 108 150-270 134-266 (353)
491 3i6i_A Putative leucoanthocyan 60.3 10 0.00035 39.7 5.9 83 191-284 7-107 (346)
492 1qo8_A Flavocytochrome C3 fuma 60.2 6.2 0.00021 44.9 4.5 37 193-232 120-156 (566)
493 1pj5_A N,N-dimethylglycine oxi 60.1 6.9 0.00024 46.8 5.0 36 194-231 4-39 (830)
494 3dgh_A TRXR-1, thioredoxin red 60.1 7.6 0.00026 43.1 5.0 33 193-228 8-40 (483)
495 3cmm_A Ubiquitin-activating en 60.1 4.9 0.00017 49.4 3.7 40 191-230 422-464 (1015)
496 3jyn_A Quinone oxidoreductase; 60.0 28 0.00094 36.3 9.2 37 189-228 136-173 (325)
497 2gjc_A Thiazole biosynthetic e 60.0 6.4 0.00022 42.0 4.2 35 193-230 64-100 (326)
498 3tqh_A Quinone oxidoreductase; 59.8 16 0.00055 38.0 7.3 80 180-271 140-224 (321)
499 1sez_A Protoporphyrinogen oxid 59.6 6 0.00021 43.8 4.1 34 194-230 13-46 (504)
500 2xci_A KDO-transferase, 3-deox 59.6 18 0.00061 38.7 7.7 89 178-290 209-307 (374)
No 1
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-132 Score=1094.29 Aligned_cols=416 Identities=36% Similarity=0.559 Sum_probs=393.9
Q ss_pred hHHHHHHhhccCCCCCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCC
Q psy14495 11 KSHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIG 90 (766)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G 90 (766)
++++++|+||+++ +|||++.||+|++|++|||++|||||+++|++|.+||...|+||+|||+|+|||||||||||||||
T Consensus 31 ~~~~~al~~h~~~-~GKi~v~~~~~~~~~~dLslaYTPgVa~~c~~i~~dp~~~~~yt~kgn~VaVVTDG~aILGLGDiG 109 (487)
T 3nv9_A 31 FYKELAEKVHKFY-KGKIQIMPKCTLAGFNWFNAYYTPGVSRISTNIRDNNDSSLFYSLRGNFVGVVSDSTRVLGDGDVT 109 (487)
T ss_dssp HHHHHHHHHHHHH-TSSEEEEECSCCSSGGGHHHHSTTTHHHHHHHHHHCGGGHHHHSGGGGEEEEEECSSSBGGGBCCC
T ss_pred hhHHHHHHHhhhC-CCeEEEEecCCCCCHHHCeeeeCcchHHHHHHHHhChHHHhhhcccCCEEEEEEcCceeeeccccc
Confidence 4679999999984 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhhHHHHhhhcCCCccccCCCCC------CHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCc
Q psy14495 91 PLASKPVMEGKAVLFKKFAGIDVFDLEINET------DPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIP 164 (766)
Q Consensus 91 ~~~~~~i~~gK~~ly~~~~gi~~l~v~~~~~------~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~ 164 (766)
++|||||||||++|||+|||||+|||++|+. |+|||+++|+++||+||+||||||++||||+||+|||++++||
T Consensus 110 ~~agmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~P~fG~InlEDf~ap~af~il~ryr~~~~ip 189 (487)
T 3nv9_A 110 PPGGLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQHTFGAINLEDISQPNCYKILDVLRESCDIP 189 (487)
T ss_dssp GGGGHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSC
T ss_pred cccCCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhCCCCCeecHhhcCCchHHHHHHHHHhhccCC
Confidence 9888999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred EEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC----
Q psy14495 165 VFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM---- 240 (766)
Q Consensus 165 ~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l---- 240 (766)
||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|++++||||||++|||+++| ++|
T Consensus 190 vFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R-~~l~~~~ 268 (487)
T 3nv9_A 190 VWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGR-EDIKKDT 268 (487)
T ss_dssp EEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTC-HHHHHCG
T ss_pred ccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCc-chhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 456
Q ss_pred -cHHHHHhccccC---CCCHHHHhccCcEEEecC--CCCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEE
Q psy14495 241 -DSNKARFIKDTT---ARTLSDIIPNADIFLGLS--VSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIA 314 (766)
Q Consensus 241 -~~~k~~~a~~~~---~~~L~e~i~~~~vliG~S--~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~a 314 (766)
+++|.+||+.++ ..+|+|+|+++|||||+| ++|+||+|||++|++||||||||||||||+||||+++ |++|||
T Consensus 269 ~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A~~~-G~aIvA 347 (487)
T 3nv9_A 269 RFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAKEA-GAYIVA 347 (487)
T ss_dssp GGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHHT-TCSEEE
T ss_pred ccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHHHHh-CCEEEE
Confidence 558889999763 579999999999999999 4699999999999999999999999999999999985 679999
Q ss_pred cCCCCCcccccccccccchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhh
Q psy14495 315 TGRSDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRL 394 (766)
Q Consensus 315 tG~~~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~v 394 (766)
||||+||||+||+|+|||||||+|+++|++|||+|+++||++||+++++++ ++++++||+++++++
T Consensus 348 TGrsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~--------------l~~~~i~P~~~d~~V 413 (487)
T 3nv9_A 348 TGRGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAEKRG--------------INPDNIIGTMDEPGI 413 (487)
T ss_dssp ESCTTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTC--------------CBTTBCSCCTTCTTH
T ss_pred ECCCCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHHHHHhhCCccc--------------CCCCceeCCccccch
Confidence 999999999999999999999999999999999999999999999988754 456789999999999
Q ss_pred HhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHhhhhhhccccccchHHHH
Q psy14495 395 MIKIAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQI 443 (766)
Q Consensus 395 s~~IA~aVa~~a~~~gvA~~~~~d~~~~~~~~~~~~~~s~~~m~~L~~~ 443 (766)
+.+||.+|+++|+++|+|+.++.++++|.+.+++++..++.+++.+.+.
T Consensus 414 s~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3nv9_A 414 FPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDIKEARESAQLLQDS 462 (487)
T ss_dssp HHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999885588999888889888877766666554
No 2
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=3.1e-121 Score=999.48 Aligned_cols=381 Identities=46% Similarity=0.730 Sum_probs=361.9
Q ss_pred HHHHHHhhccCCCCCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCCC
Q psy14495 12 SHQSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGP 91 (766)
Q Consensus 12 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G~ 91 (766)
+++++|+||++ ++|||++.||++++|++|||++||||||++|++|.++|+++|+||.++|+|+|||||||||||||+|+
T Consensus 7 ~~~~~~~~h~~-~~gk~~~~~~~~~~~~~~l~i~YtP~V~~~c~~i~~~p~~v~~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 7 LGQLALEQAKT-FGGKLEVQPKVDIKTKHDLSIAYTPGVASVSSAIAKDKTLAYDLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp CSCCTTHHHHH-HTSSEEEEESSCCSSHHHHHHHSTTTTHHHHHHHHHCGGGHHHHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred hhHHHHHHHHh-CCCeEEEEEecccCCHHHCeEEECchHHHHHHHHHhCHHHHHHhcccCCEEEEEECCccccCCCCccc
Confidence 35789999997 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhHHHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCCc
Q psy14495 92 LASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQH 171 (766)
Q Consensus 92 ~~~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~q 171 (766)
+|||||||||+.|||+|||||++||++|..|+||||++++.+||+||+||||||++||||++|+|||++++|||||||||
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiq 165 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQH 165 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHH
T ss_pred ccCCcchhCHHHHHHhccCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhcCCcceecchhh
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc
Q psy14495 172 GTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT 251 (766)
Q Consensus 172 GTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~ 251 (766)
|||+|++||++||+|++|++++|+||||+|||+||++||+++..+|++ ||||+|++|||+++|.++|+++|++||+++
T Consensus 166 GTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~ 243 (398)
T 2a9f_A 166 GTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFGIINEQEAAQLAPHHLDIAKVT 243 (398)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTEECCTTCCCSCCC---CHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCCcccCCccccchHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999984 999999999999999446999999999976
Q ss_pred C----CCCHHHHhccCcEEEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEEcCCCCCccccccc
Q psy14495 252 T----ARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNV 327 (766)
Q Consensus 252 ~----~~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~atG~~~~p~Q~NN~ 327 (766)
+ ..+|+|+|+++|||||+|+||+||+|||++|+++|||||||||||||+||||++| |++||||||++||||+||+
T Consensus 244 ~~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~~-g~~i~atGrs~~p~Q~NN~ 322 (398)
T 2a9f_A 244 NREFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEALEA-GAYIVGTGRSDFPNQINNV 322 (398)
T ss_dssp SCTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHTT-TCSEEEESCTTSSSBCCGG
T ss_pred CcccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHHh-CCeEEEeCCCCCCCcCCce
Confidence 5 5789999999999999999999999999999999999999999999999999999 6799999999999999999
Q ss_pred ccccchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhhHhHHHHHHHHHHH
Q psy14495 328 LCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAAE 407 (766)
Q Consensus 328 ~~FPgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~vs~~IA~aVa~~a~ 407 (766)
|+|||||||+|+++|++|||+|+++||++||+++++++ ++++++||++++++++.+||.+|+++|+
T Consensus 323 ~~FPgi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~~~--------------~~~~~i~P~~~~~~v~~~VA~aVa~~A~ 388 (398)
T 2a9f_A 323 LAFPGIFRGALDARAKTITVEMQIAAAKGIASLVPDDA--------------LSTTNIIPDAFKEGVAEIVAKSVRSVVL 388 (398)
T ss_dssp GTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSSCS--------------SCCSCCSCSSTTHHHHHHHTTTTCCCCC
T ss_pred eEcchHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCccc--------------CCCCccCCCCCcchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998764 4567899999999999999999999888
Q ss_pred HcC
Q psy14495 408 KSG 410 (766)
Q Consensus 408 ~~g 410 (766)
++.
T Consensus 389 ~~~ 391 (398)
T 2a9f_A 389 KSE 391 (398)
T ss_dssp ---
T ss_pred HhC
Confidence 653
No 3
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=8.5e-116 Score=979.11 Aligned_cols=374 Identities=26% Similarity=0.462 Sum_probs=342.2
Q ss_pred ccccCCc-cccceeeccchHHHHHH---HhcCccccc--------------ccccCCcEEEEEecccccccCCCCCCCCC
Q psy14495 33 SKQLSNQ-DDLALAYSPGVASACEE---IVSNSNNVF--------------KYTTKGNLVAVITNGTAVLGMGNIGPLAS 94 (766)
Q Consensus 33 ~~~~~~~-~~l~i~YtP~v~~~c~~---i~~~p~~~~--------------~~~~~~~~v~vvtdG~~iLGlGd~G~~~~ 94 (766)
++..++. ++|||+||||||++|++ ||++|+|+| +|+.+++++||||||||||||||||++ |
T Consensus 76 ~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~-g 154 (555)
T 1gq2_A 76 KVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCY-G 154 (555)
T ss_dssp HHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGG-G
T ss_pred hhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCC-c
Confidence 4455665 89999999999999998 799999988 355566899999999999999999998 5
Q ss_pred ccchhhhHHHHhhhcCCC---ccccCCC----C----CC-------------------HHHHHHHHHHhCCCcccccccc
Q psy14495 95 KPVMEGKAVLFKKFAGID---VFDLEIN----E----TD-------------------PDKLCDIIFSLEPTFGGINLED 144 (766)
Q Consensus 95 ~~i~~gK~~ly~~~~gi~---~l~v~~~----~----~~-------------------~~~~v~~v~~~~p~~g~i~~ED 144 (766)
||||+||++|||+||||| +|||++| | +| +||||++|+.+|+.+++|||||
T Consensus 155 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~ED 234 (555)
T 1gq2_A 155 MGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFED 234 (555)
T ss_dssp GHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecc
Confidence 999999999999999999 6665555 4 46 7999999999995445999999
Q ss_pred CCCCchHHHHHHHhhcCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHH----cCCC-
Q psy14495 145 IKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIID----LGFP- 219 (766)
Q Consensus 145 ~~~~~af~il~~~~~~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~----~g~~- 219 (766)
|++||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. +|++
T Consensus 235 f~~~~af~il~ryr~--~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~ 312 (555)
T 1gq2_A 235 FANANAFRLLHKYRN--KYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSK 312 (555)
T ss_dssp CCHHHHHHHHHHHTT--TSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCH
T ss_pred cCCccHHHHHHHHhc--cCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCCh
Confidence 999999999999998 599999999999999999999999999999999999999999999999999987 7998
Q ss_pred ---CccEEEEcCCccccCCCCCCCcHHHHHhccccC-CCCHHHHhcc--CcEEEecCC-CCCCCHHHHHhhc---cCcEE
Q psy14495 220 ---LQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT-ARTLSDIIPN--ADIFLGLSV-SGVLKKEMVLQMA---KNPII 289 (766)
Q Consensus 220 ---~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~-~~~L~e~i~~--~~vliG~S~-~g~ft~evv~~M~---~~PiI 289 (766)
++||||||++|||+++|. +|+++|++||++++ ..+|+|+|++ ||||||+|+ +|+||+|||++|+ +||||
T Consensus 313 eeA~~~i~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PII 391 (555)
T 1gq2_A 313 EEAIKRIWMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPII 391 (555)
T ss_dssp HHHHTTEEEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEE
T ss_pred HHHhCcEEEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEE
Confidence 789999999999999994 69999999999864 5799999996 999999997 8999999999999 89999
Q ss_pred EeccCCCC--ccCHhhHhccc-CcEEEEcCC-----------CCCcccccccccccchhhhhhcccCCcCCHHHHHHHHH
Q psy14495 290 LALANPLP--EILPEDIKSVR-NDAIIATGR-----------SDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVH 355 (766)
Q Consensus 290 faLsNPt~--E~~pe~a~~~~-~~ai~atG~-----------~~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~~aAa~ 355 (766)
|||||||| ||+||||++|+ |+||||||| +++|||+||+|+|||||||+|+++|++|||+|+++||+
T Consensus 392 FaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~ 471 (555)
T 1gq2_A 392 FALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAE 471 (555)
T ss_dssp EECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred EECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHH
Confidence 99999998 99999999995 999999995 59999999999999999999999999999999999999
Q ss_pred HHHhccccccchhhhhhhcccccCCCccccCCCCCC-hhhHhHHHHHHHHHHHHcCCCCCCC--CCHHHHHH
Q psy14495 356 AIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFD-PRLMIKIAPAVAIAAEKSGVATKPI--KDIEIYTN 424 (766)
Q Consensus 356 aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~-~~vs~~IA~aVa~~a~~~gvA~~~~--~d~~~~~~ 424 (766)
+||+++++++. ...++||++++ ++++.+||.+|+++|+++|+|+.++ +|+.+|++
T Consensus 472 alA~~v~~~~~--------------~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~ 529 (555)
T 1gq2_A 472 VIAQEVSEENL--------------QEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIR 529 (555)
T ss_dssp HHHHTCCHHHH--------------HHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHH
T ss_pred HHHhccccccC--------------CCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Confidence 99999987642 22379999999 6699999999999999999998754 68999987
No 4
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.7e-115 Score=980.03 Aligned_cols=386 Identities=25% Similarity=0.389 Sum_probs=349.0
Q ss_pred EeeccccCCccc-cceeeccchHHHHHH---HhcCccccc--------------ccccCCcEEEEEecccccccCCCCCC
Q psy14495 30 VIPSKQLSNQDD-LALAYSPGVASACEE---IVSNSNNVF--------------KYTTKGNLVAVITNGTAVLGMGNIGP 91 (766)
Q Consensus 30 ~~~~~~~~~~~~-l~i~YtP~v~~~c~~---i~~~p~~~~--------------~~~~~~~~v~vvtdG~~iLGlGd~G~ 91 (766)
+..++..++.++ |||+||||||++|++ ||++|+|+| +|+.++++++|||||||||||||||+
T Consensus 75 Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~ 154 (564)
T 1pj3_A 75 LFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGV 154 (564)
T ss_dssp HHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGG
T ss_pred eehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCC
Confidence 344455555554 999999999999998 799999998 58888899999999999999999999
Q ss_pred CCCccchhhhHHHHhhhcCCC-------ccccCCCCC----C-------------------HHHHHHHHHHhCCCccccc
Q psy14495 92 LASKPVMEGKAVLFKKFAGID-------VFDLEINET----D-------------------PDKLCDIIFSLEPTFGGIN 141 (766)
Q Consensus 92 ~~~~~i~~gK~~ly~~~~gi~-------~l~v~~~~~----~-------------------~~~~v~~v~~~~p~~g~i~ 141 (766)
+| |+||+||++|||+||||| +||+||||+ | +||||++|+.+|+.++.||
T Consensus 155 ~g-m~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~ 233 (564)
T 1pj3_A 155 YG-MGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQ 233 (564)
T ss_dssp GG-GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred Cc-ccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEe
Confidence 85 899999999999999999 566677764 7 8999999999995556999
Q ss_pred cccCCCCchHHHHHHHhhcCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHH----cC
Q psy14495 142 LEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIID----LG 217 (766)
Q Consensus 142 ~ED~~~~~af~il~~~~~~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~----~g 217 (766)
||||++||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. +|
T Consensus 234 ~EDf~~~~af~il~ryr~--~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~G 311 (564)
T 1pj3_A 234 FEDFGNHNAFRFLRKYRE--KYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENG 311 (564)
T ss_dssp ECSCCHHHHHHHHHHHTT--TSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTT
T ss_pred ehhcCCccHHHHHHHhcc--CCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998 699999999999999999999999999999999999999999999999999985 79
Q ss_pred CCC----ccEEEEcCCccccCCCCCCCcHHHHHhccccCC---CCHHHHhc--cCcEEEecCC-CCCCCHHHHHhhc---
Q psy14495 218 FPL----QNIFVTDLAGVLYKGRSELMDSNKARFIKDTTA---RTLSDIIP--NADIFLGLSV-SGVLKKEMVLQMA--- 284 (766)
Q Consensus 218 ~~~----~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~---~~L~e~i~--~~~vliG~S~-~g~ft~evv~~M~--- 284 (766)
+++ +||||||++|||+++|.++|+++|++||++++. .+|+|+|+ +||||||+|+ +|+||+|||++|+
T Consensus 312 l~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~ 391 (564)
T 1pj3_A 312 LSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASIN 391 (564)
T ss_dssp CCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHC
T ss_pred CChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcC
Confidence 984 899999999999999944799999999998765 69999999 5999999997 8999999999999
Q ss_pred cCcEEEeccCCCC--ccCHhhHhcc-cCcEEEEcCCC-----------CCcccccccccccchhhhhhcccCCcCCHHHH
Q psy14495 285 KNPIILALANPLP--EILPEDIKSV-RNDAIIATGRS-----------DYPNQVNNVLCFPYIFRGALDSGATTITREME 350 (766)
Q Consensus 285 ~~PiIfaLsNPt~--E~~pe~a~~~-~~~ai~atG~~-----------~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~ 350 (766)
+|||||||||||| ||+||||++| .|+|||||||+ ++|||+||+|+|||||||+|+++|++|||+|+
T Consensus 392 ~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~ 471 (564)
T 1pj3_A 392 ERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVF 471 (564)
T ss_dssp SSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHH
T ss_pred CCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHH
Confidence 7999999999998 9999999999 48999999974 55999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCC-hhhHhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHH-h
Q psy14495 351 IAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFD-PRLMIKIAPAVAIAAEKSGVATKPI--KDIEIYTNH-L 426 (766)
Q Consensus 351 ~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~-~~vs~~IA~aVa~~a~~~gvA~~~~--~d~~~~~~~-~ 426 (766)
++||++||+++++++. ...++||++++ ++++.+||.+|+++|+++|+|+.++ +|+.+|+++ .
T Consensus 472 ~aAA~aLA~~v~~~~~--------------~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~ 537 (564)
T 1pj3_A 472 LEAAKALTSQLTDEEL--------------AQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERT 537 (564)
T ss_dssp HHHHHHHHTTCCHHHH--------------HTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTC
T ss_pred HHHHHHHHhhcccccC--------------CCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHh
Confidence 9999999999987642 23479999999 5699999999999999999998754 689999885 3
Q ss_pred hhhhhc
Q psy14495 427 QKFVYR 432 (766)
Q Consensus 427 ~~~~~~ 432 (766)
|+..|+
T Consensus 538 ~~p~Y~ 543 (564)
T 1pj3_A 538 WRSEYD 543 (564)
T ss_dssp CCCSCC
T ss_pred hCCCCC
Confidence 444443
No 5
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=6.4e-115 Score=949.54 Aligned_cols=371 Identities=44% Similarity=0.742 Sum_probs=356.6
Q ss_pred HHHHhhccCCCCCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCCCCC
Q psy14495 14 QSALEYHEFPIPGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPLA 93 (766)
Q Consensus 14 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G~~~ 93 (766)
..+|++|++ ++|||++.||++++|++|||++||||||++|++|.++|+++|+||.++|+|+|||||||||||||+|++|
T Consensus 13 ~~~~~~h~~-~~gk~~~~~~~~~~~~~~l~i~YtP~V~~~c~~~~~~p~~v~~~t~~~~~V~VvTdg~~vLGlGD~G~~a 91 (388)
T 1vl6_A 13 VDALEVHRF-LKGKIRTALPVEKVDRETLSLLYTPGVADVARACAEDPEKTYVYTSRWNTVAVVSDGSAVLGLGNIGPYG 91 (388)
T ss_dssp CCHHHHHHH-HTCSCEEECSCSCCCHHHHHHHSTTTHHHHHHHHHHCGGGHHHHSGGGGEEEEEECSTTBTTTBSCCHHH
T ss_pred chHHHhhcc-CCCeEEEEEeeecCCHHHCeEEECchHHHHHHHHHhCHHHHHhhcccCCeEEEEECCccccCCCcccccc
Confidence 357999988 6899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CccchhhhHHHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCCchh
Q psy14495 94 SKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGT 173 (766)
Q Consensus 94 ~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~qGT 173 (766)
||||||||+.|||+|||||++||++|..++|||+++++.+||+||.||||||++||||++|+|||++++|||||||||||
T Consensus 92 g~pI~egK~~Lf~~~agid~~pi~ldv~~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGT 171 (388)
T 1vl6_A 92 ALPVMEGKAFLFKAFADIDAFPICLSESEEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGT 171 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHH
T ss_pred CCcchhCHHHHHHhccCCceEeEEeCCCCHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCC-CcHHHHHhccccC
Q psy14495 174 AIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSEL-MDSNKARFIKDTT 252 (766)
Q Consensus 174 a~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~-l~~~k~~~a~~~~ 252 (766)
|+|++||++||+|++|++++|+||||+|||+||+++|++|..+|.+ |||++|++|||+.+|.+. |+++|++||++++
T Consensus 172 asV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~ 249 (388)
T 1vl6_A 172 AVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKGILNENDPETCLNEYHLEIARITN 249 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTEECCTTSGGGCSSHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCCcccCCCcccccCHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999964 999999999999999532 9999999999765
Q ss_pred ----CCCHHHHhccCcEEEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEEcCCCCCcccccccc
Q psy14495 253 ----ARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGRSDYPNQVNNVL 328 (766)
Q Consensus 253 ----~~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~atG~~~~p~Q~NN~~ 328 (766)
..+|+|+++++|||||+|+||+||+|||++|+++||||+||||||||+||||++| |++||||||++||||+||+|
T Consensus 250 ~~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~-g~~i~atGr~~~p~Q~NN~~ 328 (388)
T 1vl6_A 250 PERLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA-GAFIVATGRSDHPNQVNNLL 328 (388)
T ss_dssp TTCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT-TCSEEEESCTTSSSBCCGGG
T ss_pred ccCchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh-cCeEEEeCCCCCCCcCCcee
Confidence 5689999999999999999999999999999999999999999999999999999 67999999999999999999
Q ss_pred cccchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhhHhHHHHHHHHHH
Q psy14495 329 CFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIKIAPAVAIAA 406 (766)
Q Consensus 329 ~FPgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~vs~~IA~aVa~~a 406 (766)
+|||||||+++++|+ |||+|+++||++||+++ + ++++++||++++++++.+||.+|+++|
T Consensus 329 ~FPgi~~Gal~~~a~-i~~~m~~aAa~alA~~~--~---------------~~~~~i~P~~~~~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 329 AFPGIMKGAVEKRSK-ITKNMLLSAVEAIARSC--E---------------PEPERIIPEAFDMKVHLNVYTAVKGSA 388 (388)
T ss_dssp THHHHHHHHHHHCSC-CCHHHHHHHHHHHHHTS--C---------------CBTTBSSCCTTCHHHHHHHHHHHHHCC
T ss_pred EcchHhHHHHhcCCc-cCHHHHHHHHHHHHhhh--c---------------cCCCcccCCCCcchhhHHHHHHHHhhC
Confidence 999999999999999 99999999999999998 2 245689999999999999999999854
No 6
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=4.9e-115 Score=977.10 Aligned_cols=374 Identities=24% Similarity=0.417 Sum_probs=341.6
Q ss_pred ccccCCc-cccceeeccchHHHHHH---HhcCcccccc----------------cccCCcEEEEEecccccccCCCCCCC
Q psy14495 33 SKQLSNQ-DDLALAYSPGVASACEE---IVSNSNNVFK----------------YTTKGNLVAVITNGTAVLGMGNIGPL 92 (766)
Q Consensus 33 ~~~~~~~-~~l~i~YtP~v~~~c~~---i~~~p~~~~~----------------~~~~~~~v~vvtdG~~iLGlGd~G~~ 92 (766)
++..++. ++|||+||||||++|++ ||++|+|+|. |+.+++++||||||||||||||||++
T Consensus 112 rll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~ 191 (605)
T 1o0s_A 112 RVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAY 191 (605)
T ss_dssp HHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGG
T ss_pred hhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCC
Confidence 4455565 89999999999999999 6899999982 34456899999999999999999997
Q ss_pred CCccchhhhHHHHhhhcCCC---ccccCCC----C----CC-------------------HHHHHHHHHHhCCCcccccc
Q psy14495 93 ASKPVMEGKAVLFKKFAGID---VFDLEIN----E----TD-------------------PDKLCDIIFSLEPTFGGINL 142 (766)
Q Consensus 93 ~~~~i~~gK~~ly~~~~gi~---~l~v~~~----~----~~-------------------~~~~v~~v~~~~p~~g~i~~ 142 (766)
|||||+||++|||+||||| +|||++| | +| +||||++|+.+|+.+++|||
T Consensus 192 -g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ 270 (605)
T 1o0s_A 192 -GIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQF 270 (605)
T ss_dssp -GGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -cCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeH
Confidence 5999999999999999999 6665555 4 46 78999999999944459999
Q ss_pred ccCCCCchHHHHHHHhhcCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHH----cCC
Q psy14495 143 EDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIID----LGF 218 (766)
Q Consensus 143 ED~~~~~af~il~~~~~~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~----~g~ 218 (766)
|||++||||+||+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. +|+
T Consensus 271 EDf~~p~af~il~ryr~--~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl 348 (605)
T 1o0s_A 271 EDFANPNAFRLLDKYQD--KYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGI 348 (605)
T ss_dssp CSCCHHHHHHHHHHHTT--TSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTC
T ss_pred hhcCCccHHHHHHHhcc--CCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998 599999999999999999999999999999999999999999999999999987 799
Q ss_pred C----CccEEEEcCCccccCCCCCCCcHHHHHhccccC-CCCHHHHhcc--CcEEEecCC-CCCCCHHHHHhhc---cCc
Q psy14495 219 P----LQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT-ARTLSDIIPN--ADIFLGLSV-SGVLKKEMVLQMA---KNP 287 (766)
Q Consensus 219 ~----~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~-~~~L~e~i~~--~~vliG~S~-~g~ft~evv~~M~---~~P 287 (766)
+ ++||||||++|||+++|. +|+++|++||++++ ..+|+|+|++ ||||||+|+ +|+||+|||++|+ +||
T Consensus 349 ~~eeA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~P 427 (605)
T 1o0s_A 349 SKEEACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERP 427 (605)
T ss_dssp CHHHHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSC
T ss_pred ChhhhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCC
Confidence 8 689999999999999994 69999999999864 5799999996 999999997 8999999999999 899
Q ss_pred EEEeccCCCC--ccCHhhHhccc-CcEEEEcCCC----------CCcccccccccccchhhhhhcccCCcCCHHHHHHHH
Q psy14495 288 IILALANPLP--EILPEDIKSVR-NDAIIATGRS----------DYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAV 354 (766)
Q Consensus 288 iIfaLsNPt~--E~~pe~a~~~~-~~ai~atG~~----------~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~~aAa 354 (766)
|||||||||| ||+||||++|+ |+||||||++ ++|||+||+|+|||||||+|+++|++|||+|+++||
T Consensus 428 IIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA 507 (605)
T 1o0s_A 428 IIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAA 507 (605)
T ss_dssp EEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHH
T ss_pred EEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHH
Confidence 9999999998 99999999995 9999999954 899999999999999999999999999999999999
Q ss_pred HHHHhccccccchhhhhhhcccccCCCccccCCCCCC-hhhHhHHHHHHHHHHHHcCCCCCCC--CCHHHHHH
Q psy14495 355 HAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFD-PRLMIKIAPAVAIAAEKSGVATKPI--KDIEIYTN 424 (766)
Q Consensus 355 ~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~-~~vs~~IA~aVa~~a~~~gvA~~~~--~d~~~~~~ 424 (766)
++||+++++++. ...++||++++ ++++.+||.+|+++|+++|+|+.++ +|+.+|++
T Consensus 508 ~aLA~~v~~~~~--------------~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~ 566 (605)
T 1o0s_A 508 KKVASCVTEDSL--------------KVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVR 566 (605)
T ss_dssp HHHHHTCCHHHH--------------TTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHH
T ss_pred HHHHhhcccccC--------------CCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Confidence 999999987542 23479999999 6699999999999999999998754 68999987
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=9.4e-94 Score=799.88 Aligned_cols=411 Identities=45% Similarity=0.757 Sum_probs=382.6
Q ss_pred HHHHHhhccCCC--CCcEEEeeccccCCccccceeeccchHHHHHHHhcCcccccccccCCcEEEEEecccccccCCCCC
Q psy14495 13 HQSALEYHEFPI--PGKISVIPSKQLSNQDDLALAYSPGVASACEEIVSNSNNVFKYTTKGNLVAVITNGTAVLGMGNIG 90 (766)
Q Consensus 13 ~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~l~i~YtP~v~~~c~~i~~~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G 90 (766)
++++|+||+++. +|||++.||++++|++|||++||||||++|++|.+||+.+|.||.++|+++|||||+|||||||+|
T Consensus 3 ~~~~~~~h~~~~~~~gk~~~~~~~~~~~~~~l~~~YtP~v~~~c~~~~~~~~~~~~~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 3 REKALEFHKNNFPGNGKIEVIPKVSLESREELTLAYTPGVAEPCKEIARDPGKVYEYTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp HHHHHHHTSCCSSSSSSEEEEESSCCCSHHHHHHHSTTTTHHHHHHHHHCGGGHHHHSSGGGEEEEEECSTTBTTTBCCC
T ss_pred hHHHHHHHHhcCCCCCEEEEEEeeccCCHHHCeeEECchhHHHHHHHHHCHHHHHhhcccCcEEEEEECCCeEeccccee
Confidence 689999999854 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhhHHHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC
Q psy14495 91 PLASKPVMEGKAVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ 170 (766)
Q Consensus 91 ~~~~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~ 170 (766)
+++++|+|+||+.||++|||||++|+++|.+|+|+|+++++.++|+|+++|||||+.|+||+++++|++..++||||||+
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~~~f~GinvED~T~P~k~~il~~l~~avNt~vf~dD~ 162 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIAPTFGGINLEDIASPKCFYILERLREELDIPVFHDDQ 162 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHH
T ss_pred ccccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhCccCcEEEEEeCCCchHHHHHHHHHHhcCEEEEeCCC
Confidence 97789999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEc----CCccccCCCCCC---CcHH
Q psy14495 171 HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTD----LAGVLYKGRSEL---MDSN 243 (766)
Q Consensus 171 qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D----~~Glv~~~r~~~---l~~~ 243 (766)
||||.+.++|+++||+.+|++++++|+||+|||+||.+|+.+|.++|+++++||++| ++||+++. ++ +.++
T Consensus 163 ~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~ 240 (439)
T 2dvm_A 163 QGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSD--LDLEKLFPY 240 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTT--SCHHHHSTT
T ss_pred cEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccc--cchhHHHHH
Confidence 999999999999999999999999999999999999999999999999777999999 99999886 25 7788
Q ss_pred HHHhccccC----CCCHHHHhccCcEEEecCCC--CCCCHHHHHhhccCcEEEeccCCCCccCHhhHhcccCcEEEEcCC
Q psy14495 244 KARFIKDTT----ARTLSDIIPNADIFLGLSVS--GVLKKEMVLQMAKNPIILALANPLPEILPEDIKSVRNDAIIATGR 317 (766)
Q Consensus 244 k~~~a~~~~----~~~L~e~i~~~~vliG~S~~--g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~~~~~ai~atG~ 317 (766)
|.+|++..+ ..+|.|+++++|+|||+|.. |.|++++++.|+++||||+|+||++||+|++|++| |.+++|||+
T Consensus 241 ~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~~~-G~~ivatG~ 319 (439)
T 2dvm_A 241 RGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAKKA-GARIVATGR 319 (439)
T ss_dssp CHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHHHH-TCSEECBSC
T ss_pred HHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHHHc-CCeEEcCCC
Confidence 888887543 46899999999999999985 99999999999999999999999999999999999 458999999
Q ss_pred CCCcccccccccccchhhhhhcccCCcCCHHHHHHHHHHHHhccccccchhhhhhhcccccCCCccccCCCCCChhhHhH
Q psy14495 318 SDYPNQVNNVLCFPYIFRGALDSGATTITREMEIAAVHAIADLAQIEQSDIVNTTYGITNMTFGSECIIPKPFDPRLMIK 397 (766)
Q Consensus 318 ~~~p~Q~NN~~~FPgi~~g~l~~~a~~i~~~m~~aAa~aLA~l~~~~~~~~~~~~y~~~~~~~g~~~~lP~~~~~~vs~~ 397 (766)
+++|+|+||+|+|||||||+|+++|++|||+|+++||++||++++++ ++++++|++++++++.+
T Consensus 320 ~ml~~Q~nn~~~FPGi~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~----------------~~~~i~P~~~~~~v~~~ 383 (439)
T 2dvm_A 320 SDYPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASIVEEP----------------SEENIIPSPLNPIVYAR 383 (439)
T ss_dssp SSSSSBCCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC----------------BTTBCSCCTTCHHHHHH
T ss_pred chhHHHHHHHhcccCchHHHHhcCCCCCCHHHHHHHHHHHHhhCccc----------------cCCccCCCcccchhhHH
Confidence 99999999999999999999999999999999999999999998654 23479999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHhhhhhhccccccchHHHH
Q psy14495 398 IAPAVAIAAEKSGVATKPIKDIEIYTNHLQKFVYRSSAFMNPIFQI 443 (766)
Q Consensus 398 IA~aVa~~a~~~gvA~~~~~d~~~~~~~~~~~~~~s~~~m~~L~~~ 443 (766)
||.+|+++|+++|+|+.++++.+.+ +.+++++|.++.+|+++++.
T Consensus 384 va~av~~~a~~~g~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 428 (439)
T 2dvm_A 384 EARAVAEEAMKEGVARTKVKGEWVE-EHTIRLIEFYENVIAPINKK 428 (439)
T ss_dssp HHHHHHHHHHHHTCCSSCCCHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCChHHHH-HHHHHHhhhhHHHHHHHHHc
Confidence 9999999999999998876333322 34558899998888888764
No 8
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7e-77 Score=644.26 Aligned_cols=321 Identities=29% Similarity=0.442 Sum_probs=312.3
Q ss_pred ccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcc
Q psy14495 436 FMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQ 515 (766)
Q Consensus 436 ~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~ 515 (766)
++++++++||+.+ |||+|+||+|+++|+|+..+.++|+++|||||++++|++.+++++++++ +++|||++++..
T Consensus 7 ~~~~l~~~ak~~~---kriv~~eg~d~~vl~Aa~~a~~eg~~~~iLvG~~~~I~~~~~~~g~~~~---~~eIi~~~~~~~ 80 (331)
T 4e4r_A 7 LLNVLKDKLSGKN---VKIVLPEGEDERVLTAATQLQATDYVTPIVLGDETKVQSLAQKLNLDIS---NIELINPATSEL 80 (331)
T ss_dssp HHHHHHHHHTTSC---EEEEECCTTSHHHHHHHHHHHTSSSEEEEEESCHHHHHHHHHHTTCCCT---TSEEECGGGCTT
T ss_pred HHHHHHHHHhhCC---CEEEEecCCCHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHHcCCCcc---cCEEEcCCChhH
Confidence 5789999999987 8999999999999999999999999999999999999999999999876 899999999999
Q ss_pred hhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEEE
Q psy14495 516 YKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNL 595 (766)
Q Consensus 516 ~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i~ 595 (766)
+++||+.|+++|++|| |+++|++++ ++|+|+|++||++|+||++|||..|||+++|+.+++++|+.||++++|++++|
T Consensus 81 ~~~~~~~~~~lr~~kg-~~~~A~~~~-~~s~~~a~~lV~~G~ADa~vsG~~~~T~~~l~~al~iig~~~g~~r~s~~~~m 158 (331)
T 4e4r_A 81 KAELVQSFVERRKGKT-TEEQAQELL-NNVNYFGTMLVYAGKADGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFM 158 (331)
T ss_dssp HHHHHHHHHHHTTTSS-CHHHHHHHT-TSHHHHHHHHHHTTSCSEEEECSSTTCCCTHHHHHHHTCBCTTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCC-CHHHHHHHh-cccHHHHHHHHHCCCCcEEEeCCCCCHHHHHHHHHHHhccCCCCceEEEEEEE
Confidence 9999999999999999 999999888 79999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeeCccCCCCCCcchHHHHHHHHHHHccCC----Cc
Q psy14495 596 ILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMP----EL 671 (766)
Q Consensus 596 ~~~~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~----~~ 671 (766)
|++++.+||+|||+|++||+|||++|++|++.++|.||++|||||||+||+||+++|+++++++|+++++++.| +|
T Consensus 159 ~~~~~~~~~~D~gvN~~P~~e~l~~ia~~a~~~a~~~Gi~PkVAlLs~s~~Gs~~~~~~~~~~~A~~llk~~~~~~~~~~ 238 (331)
T 4e4r_A 159 IKGDEQYIFGDCAINPELDSQGLAEIAVESAKSALSFGMDPKVAMLSFSTKGSAKSDDVTKVQEAVKLAQQKAEEEKLEA 238 (331)
T ss_dssp EETTEEEEEESSSSCSCCCHHHHHHHHHHHHHHHHHTTCCCEEEEECSSSTTSSCSHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EeCCCcEEEEeCeecCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCcHHHHHHHHHHHhhCcCCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997767 99
Q ss_pred eEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHHH
Q psy14495 672 EIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRR 751 (766)
Q Consensus 672 ~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~~ 751 (766)
.+|||+|+|+|++++++++|+|+|+++|+||+|||||+++|||+||++++ ++++..+||+|+|+++||+++||+||+++
T Consensus 239 ~vdGpl~~D~A~~~~~~~~k~~~s~vaG~advli~P~l~aGNi~~K~l~~-~~~a~~~Gpil~G~~~Pv~~~SR~~s~~~ 317 (331)
T 4e4r_A 239 IIDGEFQFDAAIVPGVAEKKAPGAKLQGDANVFVFPSLEAGNIGYKIAQR-LGGYDAVGPVLQGLNSPVNDLSRGCSIED 317 (331)
T ss_dssp EEEEEECHHHHHCHHHHHHHSTTCSCSSCCCEEECSSHHHHHHHHHHHHH-TTCCEEEEEEEECBSSCEEECCTTCCHHH
T ss_pred EEEccCcHHHHcCHHHHHhhCCCCccCCcCCEEEeCChhHHHHHHHHHHH-hcCCeEEChhhhCCCCcEEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy14495 752 IVNMTALCVIDALS 765 (766)
Q Consensus 752 i~n~ialA~~~a~~ 765 (766)
|+|++++|+.|||.
T Consensus 318 i~n~~ai~~~~a~~ 331 (331)
T 4e4r_A 318 VYNLSFITAAQALQ 331 (331)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999974
No 9
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=100.00 E-value=4.9e-66 Score=561.91 Aligned_cols=320 Identities=25% Similarity=0.400 Sum_probs=307.5
Q ss_pred ccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcc
Q psy14495 436 FMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQ 515 (766)
Q Consensus 436 ~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~ 515 (766)
+|++++++||+.+ +||+|++|+|+++|+|+.++.++++++|||||++++|++.+++++ ++ +++|||+++...
T Consensus 4 ~~~~l~~~a~~~~---~ri~~~~g~~e~vl~aa~~~~~~~~~~piLvG~~~~i~~~~~~~~--~~---~~~ii~~~~~~~ 75 (333)
T 2af4_C 4 FLEKISERAKKLN---KTIALPETEDIRTLQAAAKILERGIADIVLVGNEADIKALAGDLD--LS---KAKIVDPKTYEK 75 (333)
T ss_dssp HHHHHHHHHHHHC---CEEEECCTTSHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHSSCC--CT---TSEEECTTSCTT
T ss_pred HHHHHHHHHhcCC---CEEEEecCCCHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHHHhcC--CC---CCEEECCCcchh
Confidence 5789999999887 899999999999999999999999999999999999999997763 33 799999999999
Q ss_pred hhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEEE
Q psy14495 516 YKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNL 595 (766)
Q Consensus 516 ~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i~ 595 (766)
+++|++.|+++|++||+|++.|++.++ +|+++|++||++|+||++|||.+++|+++|+.+++++|+.||.+++|++++|
T Consensus 76 ~~~~~~~~~~~~~~~G~~~~~a~~~~~-~~~~~A~~lv~~G~aDa~Vsg~i~~t~~~l~~a~~~i~~~~g~~~~s~~~~m 154 (333)
T 2af4_C 76 KDEYINAFYELRKHKGITLENAAEIMS-DYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFII 154 (333)
T ss_dssp HHHHHHHHHHHHGGGTCCHHHHHHHTT-SHHHHHHHHHHTTSCSEEEECTTSCSHHHHHHHHHHTCBSTTCSCCEEEEEE
T ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHhh-hhHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHhccCCCCceeEEEEEE
Confidence 999999999999999999999999887 9999999999999999999999999999999999999999999999999999
Q ss_pred EeC------CCeEEEEeccccCCCCHHHHHHHHHHHHHHHHH-cCCCCeEEEeeCccCCCCCCcchHHHHHHHHHHHccC
Q psy14495 596 ILM------DRQLMLVDTHINENPNAEELSEITILAAKKMFS-LGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQM 668 (766)
Q Consensus 596 ~~~------~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~-lGi~PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~ 668 (766)
+++ .+.++++|||+|++||+|+|++|+++++.++|. ||++|||||||+||+|++++|+.+++++|+++++++.
T Consensus 155 ~~~~~~~~~~~~~~~tD~~vn~~pt~e~l~~ia~~~~~~~~~~~Gi~PrVAlLs~ge~g~~~~~~~~~v~~A~~ll~~~~ 234 (333)
T 2af4_C 155 SVPDCEYGSDGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELA 234 (333)
T ss_dssp ECTTCCSTBTTEEEEETSSSCSSCCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHHHHHC
T ss_pred EecccccCCCCeEEEEeCcccCCCCHHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCCcHHHHHHHHHHhccC
Confidence 987 567999999999999999999999999999999 9999999999999999999999999999999999888
Q ss_pred CCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCC
Q psy14495 669 PELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSAT 748 (766)
Q Consensus 669 ~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s 748 (766)
|+++|+||+|+|+|++++++++|+|+|+++|+||||||||+++|||.||++++ +++.+++||+++|+++||+++||+|+
T Consensus 235 ~~~~v~Gpl~~D~a~~~~~~~~k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~-~~~~~~~G~illGl~~Pvi~ts~~~~ 313 (333)
T 2af4_C 235 PDIAIDGELQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQR-LAKAEAYGPITQGLAKPINDLSRGCS 313 (333)
T ss_dssp TTSEEEEEECHHHHHCHHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHHH-TSCCEEEEEEEESBSSCEEECCTTCC
T ss_pred CCcEEEecCcHHHhcCHHHHHhcCCCCccCCcCCEEEECCchHHHHHHHHHHH-ccCccCccceeecCCCcEEECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy14495 749 VRRIVNMTALCVIDALS 765 (766)
Q Consensus 749 ~~~i~n~ialA~~~a~~ 765 (766)
+++|+|++++|+.+++.
T Consensus 314 ~~~i~~~i~~a~~~a~~ 330 (333)
T 2af4_C 314 DEDIVGAVAITCVQAAA 330 (333)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999874
No 10
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=100.00 E-value=6.5e-66 Score=564.62 Aligned_cols=321 Identities=25% Similarity=0.411 Sum_probs=306.6
Q ss_pred cccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCC-CC
Q psy14495 435 AFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPD-FN 513 (766)
Q Consensus 435 ~~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~-~~ 513 (766)
.+|++++++||+.+ |||+|++|+|+++|+|+.++.++++++|||||++++|++.+++.+++++ +++|||++ +.
T Consensus 13 ~~~~~l~~~a~~~~---~~I~~~~g~de~vl~Aa~~~~~~~~~~piLvG~~~~I~~~~~~~gl~~~---~~~ii~~~~~~ 86 (355)
T 1vmi_A 13 AIIERCRELALRAP---ARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMD---GLQVIDPHGNL 86 (355)
T ss_dssp HHHHHHHGGGGSCC---CEEEESCCSSHHHHHHHHHHHHTTSCEEEEESCHHHHHHHHHHHTCCCT---TCEEECTTSCH
T ss_pred HHHHHHHHHHhcCC---CEEEEEcCCCHHHHHHHHHHHHhCCCEEEEEECHHHHHHHHHHcCCCcC---CeEEECCCccc
Confidence 46899999999887 8999999999999999999999999999999999999999999998765 79999999 88
Q ss_pred cchhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEE
Q psy14495 514 KQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMS 593 (766)
Q Consensus 514 ~~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~ 593 (766)
..+++|++.|+++|++| +++.|++.+ .+|+++|++||++|+||++|||.+++|+++|+.+++++|..||.+++|+++
T Consensus 87 ~~~~~~~~~~~~~~~~k--~~~~A~~~~-~~s~~~A~~lv~~G~aDalVsg~i~~t~~~l~~al~~~g~~~G~~~~s~~~ 163 (355)
T 1vmi_A 87 AMREEFAHRWLARAGEK--TPPDALEKL-TDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIF 163 (355)
T ss_dssp HHHHHHHHHHHHHHGGG--CCTTHHHHT-TSHHHHHHHHHHTTSCSEEEECSSSCHHHHHHHHHHHTCBCTTCCCCEEEE
T ss_pred chHHHHHHHHHhhhcCC--CHHHHHHHH-HhHHHHHHHHHhCCCCCEEEECCCCChHHHHHHHHHHhccCCCCCeEEEEE
Confidence 88999999999999999 889999877 579999999999999999999999999999999999999999999999999
Q ss_pred EE--EeCCCeEEEEeccccCCCCHHHHHHHHHHHHHHHHHc-CCCCeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCC
Q psy14495 594 NL--ILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSL-GLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPE 670 (766)
Q Consensus 594 i~--~~~~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~l-Gi~PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~ 670 (766)
+| |+.++.++++|+|+|++||+|+|++|+++++.+++.| |++|||||||+||+|++++|+++++++|+++++++.|+
T Consensus 164 ~m~~~~~~~~~~~tD~~vn~~pt~e~l~~ia~~a~~~a~~~~Gi~PrVAlLs~ge~Gs~~~~~~~~i~~A~~llk~~~~~ 243 (355)
T 1vmi_A 164 LMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPK 243 (355)
T ss_dssp EEEESSSCCCEEEESSSSCSSCCHHHHHHHHHHHHHHHHHHHSSCCEEEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTT
T ss_pred EEEeecCCCEEEEeCCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCCCCCccHHHHHHHHHHHhccCCC
Confidence 99 7767789999999999999999999999999999997 99999999999999999999999999999999988899
Q ss_pred ceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHH
Q psy14495 671 LEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVR 750 (766)
Q Consensus 671 ~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~ 750 (766)
++|+||+|+|+|++++++++|+|+|+++|+||||||||+++|||+||++++ +++.+++||+++|+++||+++||+||++
T Consensus 244 ~~v~Gpl~~D~A~~~~~~~~k~~~s~~~G~aDvlV~Pd~d~GNI~~K~l~~-~~~~~~~G~illGl~~Pvi~tS~~~s~~ 322 (355)
T 1vmi_A 244 LVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQR-LGGYRAVGPLIQGLAAPMHDLSRGCSVQ 322 (355)
T ss_dssp SEEEEEECHHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHH-HHCEEEEEEEEESBSSCEEECCTTCCHH
T ss_pred CEEEeCCChHHhhCHHHHhhcCCCCccCCCCCEEEECChhHHhHHHHHHHH-ccCccCcCceeecCCCcEEECCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy14495 751 RIVNMTALCVIDALS 765 (766)
Q Consensus 751 ~i~n~ialA~~~a~~ 765 (766)
+|+|++++|+.+++.
T Consensus 323 ~i~n~ia~a~~~a~~ 337 (355)
T 1vmi_A 323 EIIELALVAAVPRQT 337 (355)
T ss_dssp HHHHHHHHHHCCC--
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 11
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=100.00 E-value=2.5e-64 Score=547.71 Aligned_cols=320 Identities=28% Similarity=0.447 Sum_probs=308.9
Q ss_pred cccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCc
Q psy14495 435 AFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNK 514 (766)
Q Consensus 435 ~~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~ 514 (766)
.+|+++++++|+.+ +||+|++|+|+++++|+.++.++++++|||||++++|++.+++++++++ +++|+|+++..
T Consensus 9 ~~~~~~~~~a~~~~---~~i~~~~g~~e~vl~aa~~~~~~~~~~~iLvGd~~~i~~~~~~~gl~~~---~~~ii~~~~~~ 82 (329)
T 1td9_A 9 DLFSTVQEKVAGKD---VKIVFPEGLDERILEAVSKLAGNKVLNPIVIGNENEIQAKAKELNLTLG---GVKIYDPHTYE 82 (329)
T ss_dssp HHHHHHHHHHTTSC---CEEEESCTTCHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHTTTBCCT---TCEEECTTTCT
T ss_pred HHHHHHHHHHhcCC---CEEEEecCCChHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHHcCCCcC---CCEEECCCChh
Confidence 46899999999887 8999999999999999999999999999999999999999999998765 79999999988
Q ss_pred chhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEE
Q psy14495 515 QYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSN 594 (766)
Q Consensus 515 ~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i 594 (766)
.++++++.++++|++|| |++.|++.++ +|+++|++||++|+||++|||.+++|+++|+.+++++|..||.+++|++++
T Consensus 83 ~~~~~~~~~~~~r~~kg-~~~~a~~~~~-~~~~~A~~lv~~G~aDa~Vsg~i~~t~~~l~~~l~~~g~~~G~~~~s~~~~ 160 (329)
T 1td9_A 83 GMEDLVQAFVERRKGKA-TEEQARKALL-DENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFI 160 (329)
T ss_dssp THHHHHHHHHHHTTTSS-CHHHHHHHTT-SHHHHHHHHHHTTSCSEEEECTTSCHHHHHHHHHHTSCBCTTCCCCEEEEE
T ss_pred hHHHHHHHHHHHHhcCC-CHHHHHHHHH-hhHHHHHHHHHCCCCCEEEECCCCChHHHHHHHHHHhccCCCCCeEEEEEE
Confidence 89999999999999999 9999999997 899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCceEE
Q psy14495 595 LILMDRQLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEID 674 (766)
Q Consensus 595 ~~~~~~~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~vd 674 (766)
|++.++.++++|+|+|++||+|+|++|+++++.++|.||++|||||||+||+|++++|+.+++++|+++++++.|+++|+
T Consensus 161 m~~~~~~~~~tD~~~n~~pt~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~ge~G~~~~~~~~~i~~A~~ll~~~~~~~~v~ 240 (329)
T 1td9_A 161 MARGEEQYVFADCAINIAPDSQDLAEIAIESANTAKMFDIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLD 240 (329)
T ss_dssp EEETTEEEEEECSSSCSSCCHHHHHHHHHHHHHHHHTTTCCCCEEEECSSSTTSSCSHHHHHHHHHHHHHHHHCTTSCEE
T ss_pred EEECCCEEEEEcccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCchHHHHHHHHHHHhhCCCCEEE
Confidence 99866789999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred cccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHHHHHH
Q psy14495 675 GEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVN 754 (766)
Q Consensus 675 G~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~~i~n 754 (766)
||+++|+|++++++++|+|+|+++|+|||+||||+++|||.||++++ +++.+++||+++|+++||+++||+||+++|+|
T Consensus 241 Gpl~~D~a~~~~~~~~k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~-~~~~~~~G~illGl~~Pvi~ts~~~~~~~i~~ 319 (329)
T 1td9_A 241 GEFQFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQR-LGNFEAVGPILQGLNMPVNDLSRGCNAEDVYN 319 (329)
T ss_dssp EEECHHHHHCHHHHHHHCTTSSCSSCCSEEECSSHHHHHHHHHHHHH-TTTCEEEEEEEESBSSCEEECCTTCCHHHHHH
T ss_pred eCCcHHHHcCHHHHHhhCCCCccCCCCCEEEECChhHHHHHHHHHHH-hcCCcCccceeecCCCcEEECCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy14495 755 MTALCVIDA 763 (766)
Q Consensus 755 ~ialA~~~a 763 (766)
++++|++++
T Consensus 320 ~i~~a~~~a 328 (329)
T 1td9_A 320 LALITAAQA 328 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999987
No 12
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=100.00 E-value=2.8e-63 Score=541.37 Aligned_cols=322 Identities=26% Similarity=0.412 Sum_probs=308.8
Q ss_pred cccchHHHHHHhhhccccEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCc
Q psy14495 435 AFMNPIFQIAKKARKNIKRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNK 514 (766)
Q Consensus 435 ~~m~~L~~~ak~~~~~~krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~ 514 (766)
.+|+++++++|+.+ +||+|++|+|+++++|+.++.++++++||||||+++|++.+++++++++ +++|+|+++..
T Consensus 11 ~~~~~~~~~a~~~~---~~i~~~~g~~~~vl~aa~~~~~~~~~~~iLvGd~~~i~~~~~~~gl~~~---~i~ii~~~~~~ 84 (337)
T 1r5j_A 11 SLFGGLREKILGKN---MKIVFPEGNDERVVRAAARLKFEGLLEPIILGQSEEVRNLLTKLGFADQ---DYTIINPNEYA 84 (337)
T ss_dssp HHHHHHHHHHTTSC---CEEEESCSSCHHHHHHHHHHHTTTSCEEEEBSCHHHHHHHHHHTTCCCS---SCCCBCSSSCT
T ss_pred HHHHHHHHHHhcCC---CEEEEecCCCHHHHHHHHHHHHcCCCEEEEECCHHHHHHHHHhcCCCcC---CCEEECCCCch
Confidence 46899999999887 8999999999999999999998899999999999999999999998764 69999998888
Q ss_pred chhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEE
Q psy14495 515 QYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSN 594 (766)
Q Consensus 515 ~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i 594 (766)
.+++++++++++|++|| |+++|++.++ +++++|++||++|+||++|||.+++|+++++++++++|.++|.+++|++++
T Consensus 85 ~~~~~~~~~~~~r~~~G-~~~~a~~~~~-~s~~~A~~lv~~G~aDalVtg~i~kt~al~~a~~~~l~~~~g~~~~s~~~~ 162 (337)
T 1r5j_A 85 DFDKMKEAFVEVRKGKA-TLEDADKMLR-DVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQIIKTKPGISRTSGVFL 162 (337)
T ss_dssp THHHHHHHHHHHHTTTC-CHHHHHHHTT-SHHHHHHHHHHTTSCSEEEECSSSCSHHHHHHHHHSSCBCTTCSSCEEEEE
T ss_pred hHHHHHHHHHHHHhcCC-CHHHHHHHHh-hhHHHHHHHHHCCCCcEEEECCCCCHHHHHHHHHHHhccCCCCCeeEEEEE
Confidence 88889999999999999 9999999886 899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCC--eEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCce
Q psy14495 595 LILMDR--QLMLVDTHINENPNAEELSEITILAAKKMFSLGLKPRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELE 672 (766)
Q Consensus 595 ~~~~~~--~~~l~D~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~ 672 (766)
|++.++ .++++|||+|++||+|+|++|+++++.++|.||++|||||||+||+|++++++++++++|+++++++.|+++
T Consensus 163 m~~~~~~~~~~l~D~~~n~~~t~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~~~~G~e~~~~~~~i~~A~~llk~~~~~~~ 242 (337)
T 1r5j_A 163 MNRENTSERYVFADCAINIDPTAQELAEIAVNTAETAKIFDIDPKIAMLSFSTKGSGKAPQVDKVREATEIATGLNPDLA 242 (337)
T ss_dssp EEEGGGTEEEEESCSSSCSSCCHHHHHHHHHHHHHHHHHTTCCCCEEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTTSC
T ss_pred EEEcCCccEEEEEeccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCccCCCCCCCcHHHHHHHHHHhccCCCcE
Confidence 998544 799999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHHHH
Q psy14495 673 IDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRI 752 (766)
Q Consensus 673 vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~~i 752 (766)
|+||+++|.|++++++++|+|+|+++|+||++||||+++|||.||++++ +++.+++||+++|+++||+++||+||+++|
T Consensus 243 v~Gpl~~D~a~~~~~~~~k~~~s~~~G~aDvlv~p~~d~GnI~~K~l~~-~~~~~~~g~i~lGl~~Pvi~tS~~~~~~~i 321 (337)
T 1r5j_A 243 LDGELQFDAAFVPETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQR-LGMFDAIGPILQGLNKPVNDLSRGSSAEDI 321 (337)
T ss_dssp EEEEECHHHHHCHHHHHHHSCSCSSTTCCCEEECSSHHHHHHHHHHHHH-TTCCEEEEEEEESBSSCEEECCTTCCHHHH
T ss_pred EEecCcHHHhcCHHHHHhhCCCCccCCCCCEEEECChHHHHHHHHHHHH-hcCCccccccccCCCCcEEECCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999 998888999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy14495 753 VNMTALCVIDALS 765 (766)
Q Consensus 753 ~n~ialA~~~a~~ 765 (766)
+|++++|+.+++.
T Consensus 322 ~~~~a~a~~~a~~ 334 (337)
T 1r5j_A 322 YKLAIITAAQAIE 334 (337)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 13
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A*
Probab=100.00 E-value=8.4e-62 Score=517.41 Aligned_cols=268 Identities=19% Similarity=0.268 Sum_probs=244.2
Q ss_pred cEEEEecCCCHHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcchhHHHHHHHHHHccCC
Q psy14495 452 KRIIYSEGEEEKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKG 531 (766)
Q Consensus 452 krIv~~e~~d~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~~~~~~~~~~~lr~~Kg 531 (766)
|||+|+||+|+++|+|+.++.++|+++|||+|++++|+ .++ ++ +++|||+++++
T Consensus 19 kriv~~e~~d~~vl~Aa~~a~~eg~~~~ILvG~~~~I~-~~~-----~~---~~eIid~~~~~----------------- 72 (291)
T 3uf6_A 19 FVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKT-LTA-----NE---SVTWIQTDTAE----------------- 72 (291)
T ss_dssp CEEEEETCCSHHHHHHHHHHHHTTCCEEEEEESSCCHH-HHT-----ST---TEEEEECCSHH-----------------
T ss_pred CeEEEeCCCCHHHHHHHHHHHHcCCceEEEEcCHHHHh-hhc-----cC---CCEEECCCChH-----------------
Confidence 89999999999999999999999999999999999994 332 33 79999998653
Q ss_pred CCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHH-HHhccCCCccceeEEEEEEeC--CCeEEEEecc
Q psy14495 532 MIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYID-QIIGKKNKTNIYAAMSNLILM--DRQLMLVDTH 608 (766)
Q Consensus 532 ~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~-~iig~~~g~~~~s~~~i~~~~--~~~~~l~D~g 608 (766)
+.|++ |++||++|+||++|||.+ +|+++++.++ ++.|.+|| +++|++++|..+ ++.+||+|||
T Consensus 73 ---~aar~---------a~~mV~~G~ADa~vsG~~-~t~~~lr~~l~~~~G~r~~-~~vs~~~~~~~p~~~~~~~~~D~g 138 (291)
T 3uf6_A 73 ---AAAQG---------AILAVKNKEADILVKGFI-PTATLMHHVLKKENGLRTD-QLLSQIAIFDIPTYHKPLLITDCA 138 (291)
T ss_dssp ---HHHHH---------HHHHHHTTSCSEEEECSS-CHHHHHHHHTCGGGSCCCS-SCCEEEEEEECTTSSSCEEEECSS
T ss_pred ---HHHHH---------HHHHHHCCCCCEEEECCC-ChHHHHHHHhccccCCCCC-ceeeEEEEEEEcCCCCcEEEeece
Confidence 34442 999999999999999987 4689999765 57888888 478999988765 8899999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHcCCC-CeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCceEEcccchhhccCHHH
Q psy14495 609 INENPNAEELSEITILAAKKMFSLGLK-PRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNEL 687 (766)
Q Consensus 609 ~Ni~P~~e~L~~ia~~aa~~a~~lGi~-PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~~~ 687 (766)
+|++||+|||+|||+|++.++|.||++ |||||||+||+||++++ .+++|++++++..|+++||||||+|+|+++++
T Consensus 139 vN~~P~~e~la~ia~~aa~~ar~~Gie~PkVAlLS~s~~gs~~~~---~~~~A~~llk~~~~~~~vdGel~~D~Al~~~~ 215 (291)
T 3uf6_A 139 MNVAPKTKEKIAITENALAVAHQIGITNPKIALLSAVEEVTAKMP---STLEAQEVVQHFGNQISVSGPLALDVAISKEA 215 (291)
T ss_dssp SCSSCCHHHHHHHHHHHHHHHHHHTCCSCCEEEECSCSSCCTTSH---HHHHHHHHHHHHTTTSCEEEEECHHHHHCHHH
T ss_pred eecCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCccCCcCch---HHHHHHHHHHhhCCCCEEEecchHHHhcCHHH
Confidence 999999999999999999999999998 99999999999987654 45589999998879999999999999999999
Q ss_pred HhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHHHHHHHHHHHHHHHh
Q psy14495 688 LHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDAL 764 (766)
Q Consensus 688 a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~~i~n~ialA~~~a~ 764 (766)
+++|+|+|+++|+||||||||+++|||+||++++ ++++. +||+|+|+++||+++||+||+++++|++++|++++.
T Consensus 216 ~~~k~p~s~vaG~Anvli~P~l~agNi~yK~l~~-~~~~~-~Gpil~G~~~Pv~~~SR~~s~~~~~~~~ala~~~~~ 290 (291)
T 3uf6_A 216 ALHKGITDSSAGEADILIAPNIETGNALYKSLVY-FAGAK-VGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVE 290 (291)
T ss_dssp HHHTTCCCTTTTCCSEEECSSHHHHHHHHHHHHH-HSCCE-EEEEEESSSSCEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHhhCCCCccCCCCCEEEECChHHHHHHHHHHHH-hcCCc-cccceecCCCcEEECCCCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 99875 899999999999999999999999999999998874
No 14
>1yco_A Branched-chain phosphotransacylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.40A {Enterococcus faecalis}
Probab=100.00 E-value=4.1e-59 Score=494.29 Aligned_cols=267 Identities=21% Similarity=0.269 Sum_probs=242.5
Q ss_pred cEEEEecCCCHHHHHHHHHHHHcCCc---EEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcchhHHHHHHHHHHc
Q psy14495 452 KRIIYSEGEEEKILRAIQVVIDENLA---FPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTN 528 (766)
Q Consensus 452 krIv~~e~~d~~vL~Aa~~a~~eg~~---~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~~~~~~~~~~~lr~ 528 (766)
|||+|+||+|+++|+|+.++.++ ++ +|||||++++ ++++ + +++|||+++++
T Consensus 2 kriv~~e~~d~~vl~aa~~a~~~-~~~~~~~iLvG~~~~---------l~~~-~-~~~Iv~~~~~~-------------- 55 (279)
T 1yco_A 2 ITVSIAGGSQPEILQLVKKALKE-AEQPLQFIVFDTNEN---------LDTE-N-LWKYVHCSDEA-------------- 55 (279)
T ss_dssp EEEEEETCCSHHHHHHHHHHHHH-CCSCEEEEEEESSCC---------CCSS-C-CSEEEECSSHH--------------
T ss_pred cEEEEecCCCHHHHHHHHHHHHh-CCCCCeEEEEECHHH---------cCCC-C-CeEEEcCCCCH--------------
Confidence 79999999999999999999999 99 9999999986 2333 2 49999997653
Q ss_pred cCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHH-HhccCCCccceeEEEEEEeC-CCeEEEEe
Q psy14495 529 RKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQ-IIGKKNKTNIYAAMSNLILM-DRQLMLVD 606 (766)
Q Consensus 529 ~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~-iig~~~g~~~~s~~~i~~~~-~~~~~l~D 606 (766)
+.| ++|++||++|+||++|||.++ |+++|+++++ ++|+++| +|+|++++|+++ ++.+||+|
T Consensus 56 ------~~a---------~~a~~lV~~G~aDa~vsG~~~-t~~~l~~~l~~~ig~~~g-~r~s~~~~~~~p~~~~~~l~D 118 (279)
T 1yco_A 56 ------AVA---------QEAVSLVATGQAQILLKGIIQ-THTLLKEMLKSEHQLKNK-PILSHVAMVELPAGKTFLLTD 118 (279)
T ss_dssp ------HHH---------HHHHHHHHSTTCSEEEECSSC-HHHHHHHHTCTTTCCBCS-SSCEEEEEEECSSSCEEEEEC
T ss_pred ------HHH---------HHHHHHHHCCCCCEEEeCCCC-hHHHHHHHHHHhcCCCCC-CeEEEEEEEEecCCCEEEEEe
Confidence 122 259999999999999999888 5899997666 9999999 899999999987 78899999
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHcCCC-CeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCceEEcccchhhccCH
Q psy14495 607 THINENPNAEELSEITILAAKKMFSLGLK-PRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNN 685 (766)
Q Consensus 607 ~g~Ni~P~~e~L~~ia~~aa~~a~~lGi~-PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~ 685 (766)
||+|++|++|||+|||+|++.++|.||++ |||||||+||+||++++++.+++++.++++++ |+++|+||+|+|+|+++
T Consensus 119 ~g~N~~p~~e~l~~ia~~a~~~a~~lGi~~PkVAlLs~~~~g~~~~~~~~~a~~l~k~l~~~-~~~~~dG~i~~D~A~~~ 197 (279)
T 1yco_A 119 CAMNIAPTQATLIEIVENAKEVAQKLGLHHPKIALLSAAENFNPKMPSSVLAKEVTAHFNDQ-QEATVFGPLSLDLATSE 197 (279)
T ss_dssp SSSCSSCCHHHHHHHHHHHHHHHHHTTCSSCEEEEECSCSSCCTTCHHHHHHHHHHHHHSSC-SSCEEEEEECHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEeccccCCCCChHHHHHHHHHHHHHhC-CCCEEEeeCcHHhhcCH
Confidence 99999999999999999999999999995 99999999999998888777666666667775 89999999999999999
Q ss_pred HHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecCCCCCHHHHHHHHHHHHHHHh
Q psy14495 686 ELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDAL 764 (766)
Q Consensus 686 ~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~sr~~s~~~i~n~ialA~~~a~ 764 (766)
+++++|+|+|+++|+||||||||+++|||+||++++ |++++++| +|+|+++||+++||++++++|+|+|++|+.+..
T Consensus 198 ~~~~~k~~~s~~~G~adVlV~Pd~~aGNi~~K~~~~-~~~~~~gg-illG~~~pV~~~sr~~~~~~i~nai~~a~~~~~ 274 (279)
T 1yco_A 198 EAVAHKRYSGPIMGDADILVVPTIDVGNCLYKSLTL-FGHAKVGG-TIVGTKVPVVLTSRSDSTESKFHSLRFAMRQVH 274 (279)
T ss_dssp HHHHHTTCCSSCSSCCSEEECSSHHHHHHHHHHHHH-HSCCEEEE-EEESBSSCEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCccCCCCCEEEECCchHHHHHHHHHHH-hCCCeEee-eeecCCccEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 99887655 999999999999999999999999999998765
No 15
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=100.00 E-value=3.4e-44 Score=391.38 Aligned_cols=264 Identities=16% Similarity=0.228 Sum_probs=233.9
Q ss_pred CHHHHHHHHHHHHcC-CcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcchhHHHHHHHHHHccCCCCHHHHHH
Q psy14495 461 EEKILRAIQVVIDEN-LAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSMTNRKGMIEQYAQL 539 (766)
Q Consensus 461 d~~vL~Aa~~a~~eg-~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~~~~~~~~~~~lr~~Kg~s~~~A~~ 539 (766)
-+.+++|+..+.+++ +++|||||++++|++.+++. . . +++|+|+++...++++ +++++|++|
T Consensus 16 Pe~vl~aa~~a~~~~~~~~~iLvGd~~~i~~~~~~~--~-~---~~~iv~~~~~~~~~~~--~~~a~r~~k--------- 78 (345)
T 1vi1_A 16 PKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT--S-D---RITVLHADEVIEPTDE--PVRAVRRKK--------- 78 (345)
T ss_dssp THHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC--C-T---TEEEEECCBCCCTTSC--HHHHHHHCT---------
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEEcHHHHHHHHHhC--C-C---CcEEECCCCCcccccc--hHHHHHhcc---------
Confidence 478999999998887 89999999999999887654 1 2 6999999888777764 667787776
Q ss_pred HhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEEEEeCCC-eEEEEeccccCCCCHHHH
Q psy14495 540 KMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMDR-QLMLVDTHINENPNAEEL 618 (766)
Q Consensus 540 ~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i~~~~~~-~~~l~D~g~Ni~P~~e~L 618 (766)
.+|+++|++||++|+||++||+ ++|+++++++.+++|+.+|+++++.++.+|+.++ .++++|+|+|++||+|+|
T Consensus 79 ---~~s~~~A~~lv~~G~aDa~Vsa--g~t~al~~a~~~vl~~~~G~~r~a~~~~~p~~~~~~~~l~D~g~n~~~~~e~L 153 (345)
T 1vi1_A 79 ---NSSMVLMAQEVAENRADACISA--GNTGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHL 153 (345)
T ss_dssp ---TBHHHHHHHHHHTTSCSEEEEC--SCHHHHHHHHHHTTCBCTTCSSCEEECEECCSSSCCEEEECSSSCSSCCHHHH
T ss_pred ---ccHHHHHHHHHHCCCCcEEEcC--CcHHHHHHHHHHHHhhccCCCcEEEEEEecCCCCcEEEEEeccCCCCCCHHHH
Confidence 4689999999999999999998 6889999999999999999999999999998765 699999999999999999
Q ss_pred HHHHHHHHHHHHH-cCCC-CeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCceEEcccchhhccCHHHHhhhCCCCc
Q psy14495 619 SEITILAAKKMFS-LGLK-PRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSK 696 (766)
Q Consensus 619 ~~ia~~aa~~a~~-lGi~-PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~ 696 (766)
+||+++++.++|. ||++ |||||||+ |++.+++.+++++|+++++++ ++++|+||++.| +.
T Consensus 154 ~~~a~~~~~~a~~~~Gi~~PrValLN~---Ge~~~~g~e~i~~A~~ll~~~-~~i~~~G~ve~d--------------~~ 215 (345)
T 1vi1_A 154 VQYAIMGSVYSQQVRGVTSPRVGLLNV---GTEDKKGNELTKQTFQILKET-ANINFIGNVEAR--------------DL 215 (345)
T ss_dssp HHHHHHHHHHHHHTSCCSSCEEEEEES---SSSTTCSCHHHHHHHHHHHSC-TTSEEEEEEEGG--------------GG
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEeC---CCCCCCCCHHHHHHHHHHhcC-CCCeEEeccCCC--------------cc
Confidence 9999999999999 9996 99999986 556678889999999999976 789999999976 66
Q ss_pred cCCcccEEEeCCcchhHHHHHHHH------------h-----------------------hcCCccccccccccCCccEE
Q psy14495 697 LTGDANLLVLPNIESANIAYNLLK------------I-----------------------TSGNGVAIGPILLGCSKPIH 741 (766)
Q Consensus 697 vaG~AdVLV~Pnl~aGNi~~K~l~------------~-----------------------~~~~~~~~G~iLlGl~~PVv 741 (766)
+.|++||+|+ |+++|||.||++| . .+++..++||+|+|+++||+
T Consensus 216 ~~G~aDVvV~-d~~~GNI~lK~~eg~~~~~~~~~k~~f~~~~~~~lg~~l~~P~l~~~~~~~d~~~~gga~llG~~~pvi 294 (345)
T 1vi1_A 216 LDDVADVVVT-DGFTGNVTLKTLEGSALSIFKMMRDVMTSTLTSKLAAAVLKPKLKEMKMKMEYSNYGGASLFGLKAPVI 294 (345)
T ss_dssp GGTSCSEEEC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CCHHHHHHHHHHHCGGGSCCEEEETBSSCEE
T ss_pred ccCCCCEEEe-CchhhhHHHHHHHhhhhhhHHHHHHHhhcchhhhhhhhhccchHHHHHhcCCccccccceeecCCccEE
Confidence 6799999986 8999999999995 1 03334588999999999999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhc
Q psy14495 742 ILTSSATVRRIVNMTALCVIDALS 765 (766)
Q Consensus 742 ~~sr~~s~~~i~n~ialA~~~a~~ 765 (766)
++||++++++++|++++|+..++.
T Consensus 295 ~~~g~a~~~~i~~ai~~A~~~a~~ 318 (345)
T 1vi1_A 295 KAHGSSDSNAVFRAIRQAREMVSQ 318 (345)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHc
Confidence 999999999999999999998875
No 16
>1u7n_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, enterococcus faecalis V583, PSI, protein structure initiative; HET: MSE; 2.26A {Enterococcus faecalis} SCOP: c.77.1.4
Probab=100.00 E-value=9.1e-44 Score=387.06 Aligned_cols=272 Identities=18% Similarity=0.247 Sum_probs=235.9
Q ss_pred cEEEEe-cC---CCHHHHHHHHHHHHcC-CcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcchhHHHHHHHHH
Q psy14495 452 KRIIYS-EG---EEEKILRAIQVVIDEN-LAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQYKDYWKTYLSM 526 (766)
Q Consensus 452 krIv~~-e~---~d~~vL~Aa~~a~~eg-~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~~~~~~~~~~~l 526 (766)
.||++= -| .-+.+++|+..+.+++ +++|||||++++|++.+++ . . +++|+|+++...++++ +++++
T Consensus 4 ~~ia~d~mGgd~gPe~vl~aa~~a~~~~~~~~~iLvG~~~~i~~~~~~---~-~---~~~iv~~~~~~~~~~~--~~~a~ 74 (336)
T 1u7n_A 4 MKIAVDAMGGDNAPQAIVEGVMLAKQDFPDIEFQLYGKEAEIKKYITD---E-K---NITIIHTDEKIASDDE--PVKAI 74 (336)
T ss_dssp CEEEEESSCSTTTTHHHHHHHHHHHHHCTTCEEEEEECHHHHHTTCSC---C-T---TEEEEECSCCCCTTCC--HHHHH
T ss_pred cEEEEEcCCCcccHHHHHHHHHHHHHhCCCeEEEEEECHHHHHHHhcC---C-C---CcEEECCCCCcccccc--hHHHH
Confidence 577775 22 2478999999998887 8999999999999987754 1 2 6999999888777654 66778
Q ss_pred HccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHHHHHhccCCCccceeEEEEEEeCC---CeEE
Q psy14495 527 TNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYIDQIIGKKNKTNIYAAMSNLILMD---RQLM 603 (766)
Q Consensus 527 r~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~~~iig~~~g~~~~s~~~i~~~~~---~~~~ 603 (766)
|++| .+|+++|++||++|+||++||+ ++|+++++.+.+++|+.+|+++++.++.+|+.+ +.++
T Consensus 75 r~~k------------~~s~~~A~~lv~~G~ada~Vsa--g~t~a~~~~~~~~l~~~~G~~r~a~~~~~p~~~~~t~~~~ 140 (336)
T 1u7n_A 75 RRKK------------TASMVLAAQAVKNGEADAIFSA--GNTGALLAAGLFIVGRIKNVERPGLMSTLPVMGEPDKGFD 140 (336)
T ss_dssp HHCT------------TSHHHHHHHHHHHTSCSEEEES--SCHHHHHHHHHHTTCBCTTCSSCEEEEEEECTTCTTCEEE
T ss_pred HhcC------------ccHHHHHHHHHHCCCCcEEEeC--CcHHHHHHHHHHHhhhccCCCcEEEEEEeccCCCccceEE
Confidence 8777 4688999999999999999998 688999999999999999999999999999876 7799
Q ss_pred EEeccccCCCCHHHHHHHHHHHHHHHHH-cCCC-CeEEEeeCccCCCCCCcchHHHHHHHHHHHccCCCceEEcccchhh
Q psy14495 604 LVDTHINENPNAEELSEITILAAKKMFS-LGLK-PRVALLSNSNFGSNNNISAHKMRTALKLIQKQMPELEIDGEMNGNY 681 (766)
Q Consensus 604 l~D~g~Ni~P~~e~L~~ia~~aa~~a~~-lGi~-PkVAlLS~s~~gs~~~~~~~~vreA~~llk~~~~~~~vdG~l~~D~ 681 (766)
++|+|+|++||+|+|+|||++++.++|. ||++ |||||||+ |++.+++.+++++|+++++++ ++++|+||++.|
T Consensus 141 l~D~g~n~~~~~e~L~~~a~~~~~~a~~~~Gi~~PrValLN~---Ge~~~~g~e~v~~A~~ll~~~-~~i~~~G~ve~d- 215 (336)
T 1u7n_A 141 MLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNN---GTEETKGSELTKKAFELLAAD-ETINFVGNVEAR- 215 (336)
T ss_dssp EECSSSCSCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEECS---CC----CCHHHHHHHHHHHHC-TTSCEEEEECGG-
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEeC---cCCCCCCCHHHHHHHHHHhcC-CCCeEEeccCCC-
Confidence 9999999999999999999999999999 9996 99999985 556678889999999999986 789999999876
Q ss_pred ccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHH------------hhcCC------------------------
Q psy14495 682 ALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLK------------ITSGN------------------------ 725 (766)
Q Consensus 682 Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~------------~~~~~------------------------ 725 (766)
+.+.|++||+|+ |+++|||.||+++ . |+.
T Consensus 216 -------------~~~~g~~DvvV~-d~~~GNi~lK~~eg~~~~~~~~~k~~-f~~~~~~~~lg~~li~~~l~~l~~~~d 280 (336)
T 1u7n_A 216 -------------ELLNGVADVVVT-DGFTGNAVLKSIEGTAMNMMSLLKTA-ILSEGVKGKMGALLLKNALHGMKDEMD 280 (336)
T ss_dssp -------------GGGGCSCSEEEC-CHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-------CHHHHHHHHHHHHHHTC
T ss_pred -------------ccccCCCCEEEe-CcchhhHHHHHHHhhHHHHHHHHHHH-hccCCchhhhhhhhhhhhHHHHHhccC
Confidence 667799999986 8999999999993 4 543
Q ss_pred -ccccccccccCCccEEecCCCCCHHHHHHHHHHHHHHHhcC
Q psy14495 726 -GVAIGPILLGCSKPIHILTSSATVRRIVNMTALCVIDALSK 766 (766)
Q Consensus 726 -~~~~G~iLlGl~~PVv~~sr~~s~~~i~n~ialA~~~a~~~ 766 (766)
..++||+|+|+++||+++||++++++++|++++|+..++.+
T Consensus 281 ~~~~gga~llG~~~pvi~~~g~a~~~~i~~ai~~A~~~a~~~ 322 (336)
T 1u7n_A 281 YSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIHTMLETQ 322 (336)
T ss_dssp GGGGCCEEEETBSSCEEECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccceeecCcCcEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 25889999999999999999999999999999999988753
No 17
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=99.75 E-value=1.6e-17 Score=178.51 Aligned_cols=280 Identities=13% Similarity=0.152 Sum_probs=213.6
Q ss_pred cEEEEecCCC-----HHHHHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCC-Ccch----hHHHH
Q psy14495 452 KRIIYSEGEE-----EKILRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDF-NKQY----KDYWK 521 (766)
Q Consensus 452 krIv~~e~~d-----~~vL~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~-~~~~----~~~~~ 521 (766)
+||++..|+. +.++++++. +..++||++|+++.+++.++.+++++ .++.+++.+ .... -.+++
T Consensus 9 ~~iaiT~GDpaGIGpEiilka~~~---~~~~~pvviGd~~vl~~~~~~lgl~~----~~~~i~~~~~~~~~~~g~~~v~~ 81 (334)
T 3lxy_A 9 NRLVITPGEPAGVGPDLAITLAQQ---DWPVELVVCADPALLLARASQLNLPL----QLREYQADQPAIAQQAGSLTILP 81 (334)
T ss_dssp SEEEEECCCTTSSHHHHHHHHTTS---CCSSEEEEEECHHHHHHHHHHTTCCC----EEEECCTTSCCCCCCTTEEEEEE
T ss_pred CEEEEeCCCCccchHHHHHHhcCc---cCCCCEEEEECHHHHHHHHHHcCCCc----eEEecCccccccccCCCCceEEe
Confidence 7999999999 888888543 44589999999999999999998875 466666543 1100 00111
Q ss_pred HHH-HHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccC---------ChHHHHHHHHHHhccCCCccceeE
Q psy14495 522 TYL-SMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILG---------STKLHLNYIDQIIGKKNKTNIYAA 591 (766)
Q Consensus 522 ~~~-~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~---------tT~~~l~~~~~iig~~~g~~~~s~ 591 (766)
.+. ......+.|++.++..++ ++-.|++++++|++|++|+|-++ ++..+........|..+ .
T Consensus 82 ~~~~~~~~~G~~~~~~g~~a~~--~l~~Ai~~~~~G~~dalVT~Pi~K~~~~~aG~~f~GHTe~la~~~g~~~------~ 153 (334)
T 3lxy_A 82 VKTAVNVVPGKLDVGNSHYVVE--TLAKACDGAISGEFAALVTGPVQKSIINDAGIPFIGHTEFFADRSHCQR------V 153 (334)
T ss_dssp CCCSSCCCTTCCCGGGHHHHHH--HHHHHHHHHHHTSSSCEEECCCCHHHHHHTTCCCSCHHHHHHHHHTCSC------C
T ss_pred CCcccccCCCCCCHHHHHHHHH--HHHHHHHHHHCCCCCEEEECCcCHHHHHhcCCCCCChHHHHHHHhCCCC------c
Confidence 111 112334567777666553 66679999999999999999888 44444554555555421 2
Q ss_pred EEEEEeCCCeEEEEecccc-----CCCCHHHHHHHHHHHHHHHHH-cCCC-CeEEEee----CccCCCCCCcchHHHHHH
Q psy14495 592 MSNLILMDRQLMLVDTHIN-----ENPNAEELSEITILAAKKMFS-LGLK-PRVALLS----NSNFGSNNNISAHKMRTA 660 (766)
Q Consensus 592 ~~i~~~~~~~~~l~D~g~N-----i~P~~e~L~~ia~~aa~~a~~-lGi~-PkVAlLS----~s~~gs~~~~~~~~vreA 660 (766)
+.++-.++-.+++.++.+. -.+|.|.+.+.+.......++ ||++ ||||+++ ++|.|.-..++.+.++-|
T Consensus 154 ~mml~~~~lrv~lvTtHipL~~v~~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~gLNPHAGE~G~~G~EE~~iI~PA 233 (334)
T 3lxy_A 154 VMMLATEELRVALATTHLPLLAVPGAITQASLHEVITILDNDLKTKFGITQPQIYVCGLNPHAGEGGHMGHEEIDTIIPA 233 (334)
T ss_dssp EEEEEETTEEEEESSCSCCGGGHHHHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEECSSGGGGGGGTTCSHHHHTHHHH
T ss_pred eEEEEcCCceEEEecCCCcHHHHhhhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCchhHHHHHHH
Confidence 4445566767899999999 789999999999999999987 9996 9999997 468888777888889999
Q ss_pred HHHHHccCCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccE
Q psy14495 661 LKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPI 740 (766)
Q Consensus 661 ~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PV 740 (766)
.+.++++ ++.++||+..|.++.+... |++|++|++.-|.|+|.+|++.. +.+. -+-+|+ |+
T Consensus 234 i~~lr~~--Gi~~~GP~paDt~F~~~~~----------~~~D~vlaMYHDQGlip~K~l~F--~~gV---NvTlGL--P~ 294 (334)
T 3lxy_A 234 LNTLRQQ--GINLIGPLPADTLFQPKYL----------QHADAVLAMYHDQGLPVLKYQGF--GRAV---NITLGL--PF 294 (334)
T ss_dssp HHHHHHT--TCCEEEEECHHHHTSHHHH----------TTCSEEEESSHHHHHHHHHHHHT--TCCE---EEEESS--SS
T ss_pred HHHHHHC--CCceeCCCChHHhcChhhh----------ccCCEEEEcccchhhHhHHhccc--CccE---EEecCC--Ce
Confidence 9999886 7889999999999998876 89999999999999999999984 3332 255676 66
Q ss_pred EecC------------CCCCHHHHHHHHHHHHHHHhc
Q psy14495 741 HILT------------SSATVRRIVNMTALCVIDALS 765 (766)
Q Consensus 741 v~~s------------r~~s~~~i~n~ialA~~~a~~ 765 (766)
+-|| +-++..+..+++.+|+.+++.
T Consensus 295 iRTS~DHGTAfDIAGkG~A~~~S~~~Ai~~A~~~~~~ 331 (334)
T 3lxy_A 295 IRTSVDHGTALELAATGTADVGSFITALNLAIKMINN 331 (334)
T ss_dssp CEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHHHH
T ss_pred eeecCCCCcchhhccCCCCChHHHHHHHHHHHHHHHh
Confidence 5554 557888999999999988764
No 18
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.24 E-value=1e-11 Score=138.07 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=157.5
Q ss_pred CcccccccccCCcEEEEEecccccccCCCCCCC-CCccchhhhHHHHhhhcCCCccccCCCCCCH-HHHHHHHHHhCCCc
Q psy14495 60 NSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPL-ASKPVMEGKAVLFKKFAGIDVFDLEINETDP-DKLCDIIFSLEPTF 137 (766)
Q Consensus 60 ~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G~~-~~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~-~~~v~~v~~~~p~~ 137 (766)
.|.+++.++.+|+.|.|.|+++..+|++|.+.. +|.+|+++ ..+|. + |+.+..+++ ++.++.++.-.+-|
T Consensus 26 tP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~--a-----diil~vk~p~~~~i~~l~~~~~li 97 (401)
T 1x13_A 26 TPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ--S-----EIILKVNAPLDDEIALLNPGTTLV 97 (401)
T ss_dssp CHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS--S-----SEEECSSCCCHHHHTTCCTTCEEE
T ss_pred CHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc--C-----CeEEEeCCCCHHHHHHhcCCCcEE
Confidence 456677788889999999999999999999987 48999999 77786 2 444444433 34444443334455
Q ss_pred cccccccCCCCchHHHHHHHhhcCCCcEEe--------cCCc---hhHHHHHHHHHHHHhHh----CC----------cC
Q psy14495 138 GGINLEDIKAPECFYIEKKLRNHMKIPVFH--------DDQH---GTAIIVGSAILNGLKLV----KK----------KM 192 (766)
Q Consensus 138 g~i~~ED~~~~~af~il~~~~~~~~~~~fn--------DD~q---GTa~v~lA~ll~al~~~----~~----------~l 192 (766)
+.+|.++ ++ ..++.+++ .+|++|+ ++++ .+....+|| .+|++.. ++ .+
T Consensus 98 ~~~~~~~--d~---~~~~al~~-~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l 170 (401)
T 1x13_A 98 SFIWPAQ--NP---ELMQKLAE-RNVTVMAMDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAGKV 170 (401)
T ss_dssp ECCCGGG--CH---HHHHHHHH-TTCEEEEGGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEE
T ss_pred EEecCCC--CH---HHHHHHHH-CCCEEEEeehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeeccCc
Confidence 5567655 33 34566666 4799994 2222 566667665 4444432 22 25
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCC---CCC---CcH-----HHHHhccccC-------CC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGR---SEL---MDS-----NKARFIKDTT-------AR 254 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r---~~~---l~~-----~k~~~a~~~~-------~~ 254 (766)
...+|+|+|+|.+|.++++++...|. +++++|++.-..+.. +.. ++. .+..|++... ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence 68899999999999999999999996 499999864311000 000 000 0001111000 01
Q ss_pred CHHHHhccCcEEEecC------CCCCCCHHHHHhhccCcEEEeccCCC---Cc-cCHhh-HhcccCcEEEEcCCCCCccc
Q psy14495 255 TLSDIIPNADIFLGLS------VSGVLKKEMVLQMAKNPIILALANPL---PE-ILPED-IKSVRNDAIIATGRSDYPNQ 323 (766)
Q Consensus 255 ~L~e~i~~~~vliG~S------~~g~ft~evv~~M~~~PiIfaLsNPt---~E-~~pe~-a~~~~~~ai~atG~~~~p~Q 323 (766)
+|.+.++++|++|++. .+.++++++++.|.+..+|+-+|+|. .| .++.+ .+...+-.++ |...+|++
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~--g~~~~p~~ 325 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVI--GYTDLPGR 325 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEE--CCSCTGGG
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEE--eeCCCccc
Confidence 4788888999999984 23678999999999999999999873 23 33443 2333443444 55556665
Q ss_pred c
Q psy14495 324 V 324 (766)
Q Consensus 324 ~ 324 (766)
.
T Consensus 326 ~ 326 (401)
T 1x13_A 326 L 326 (401)
T ss_dssp S
T ss_pred C
Confidence 3
No 19
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.03 E-value=8.4e-10 Score=122.87 Aligned_cols=129 Identities=18% Similarity=0.241 Sum_probs=110.0
Q ss_pred cCCCcEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 160 HMKIPVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 160 ~~~~~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.++||+| +|+++||+..++.++++ .++..+.+.+++|+|.|..|.++|+.+...|+. ++++|++
T Consensus 170 ~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~---Viv~D~~ 243 (436)
T 3h9u_A 170 KLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGFGAR---VVVTEVD 243 (436)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 5889999 89999999999999965 469999999999999999999999999999974 8888873
Q ss_pred ccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhc
Q psy14495 230 GVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIKS 306 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~ 306 (766)
+.+...|.. ....+|.|+++.+|+++.++. .+.++++.++.|.+..||+-.|++.+|+.++...+
T Consensus 244 ------------p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 244 ------------PINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp ------------HHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred ------------hhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 222222222 123589999999999998776 78999999999999999999999999999987754
No 20
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.00 E-value=2.5e-09 Score=118.85 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=109.1
Q ss_pred cCCCcEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 160 HMKIPVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 160 ~~~~~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++.+|+| +|+++||+..+++|+.++ ++..+.+.+++|+|+|..|.++|+.+...|+. ++++|.+
T Consensus 179 ~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~---Viv~D~d 252 (435)
T 3gvp_A 179 KLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAMGSI---VYVTEID 252 (435)
T ss_dssp CCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCCCCEEEecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 5789999 899999999999999865 68999999999999999999999999999984 8888874
Q ss_pred ccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHh
Q psy14495 230 GVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIK 305 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~ 305 (766)
. .+...|.. ....+|.|+++.+|+++.+++ .+.++++.++.|.+..+|+-.+++..|+..+...
T Consensus 253 p------------~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 253 P------------ICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp H------------HHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred h------------hhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 2 22222221 123579999999999999886 7899999999999999999999999999987653
No 21
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.63 E-value=4.3e-08 Score=108.24 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=139.7
Q ss_pred CcccccccccCCcEEEEEecccccccCCCCCCC-CCccchhhhHHHHhhhcCCCccccCCCCCCH------HHHHHHHHH
Q psy14495 60 NSNNVFKYTTKGNLVAVITNGTAVLGMGNIGPL-ASKPVMEGKAVLFKKFAGIDVFDLEINETDP------DKLCDIIFS 132 (766)
Q Consensus 60 ~p~~~~~~~~~~~~v~vvtdG~~iLGlGd~G~~-~~~~i~~gK~~ly~~~~gi~~l~v~~~~~~~------~~~v~~v~~ 132 (766)
.|.+++.++..|+.|.|.++++...|+.|.... +|.+|+.++..+| ++.|. .+..+.+ ++.++.++.
T Consensus 19 ~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~adi---il~v~~p~~~~~~~~~i~~l~~ 92 (384)
T 1l7d_A 19 SPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQADV---VWKVQRPMTAEEGTDEVALIKE 92 (384)
T ss_dssp CHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCSE---EEEEECCCCGGGSCCGGGGSCT
T ss_pred CHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCCE---EEEecCcccccCCHHHHHhhcc
Confidence 456667777889999999999999999998876 5789998877666 44452 2211111 333333332
Q ss_pred hCCCccccccccCCCCchHHHHHHHhhcCCCcEEe----cCC-ch------hHHHHHH---HHHHHHhHhCC--------
Q psy14495 133 LEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH----DDQ-HG------TAIIVGS---AILNGLKLVKK-------- 190 (766)
Q Consensus 133 ~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn----DD~-qG------Ta~v~lA---~ll~al~~~~~-------- 190 (766)
...-|+.+|..+ .-..++.+.++ +|.+++ .+. .+ .....+| +++.+.+..++
T Consensus 93 ~~~~i~~~~~~~-----~~~~~~~~~~~-gi~~~~~e~~~~~~~~~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~ 166 (384)
T 1l7d_A 93 GAVLMCHLGALT-----NRPVVEALTKR-KITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTA 166 (384)
T ss_dssp TCEEEEECCGGG-----CHHHHHHHHHT-TCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEET
T ss_pred CCEEEEEecccC-----CHHHHHHHHHC-CCEEEEeccccccccccccchhhHHHHHHHHHHHHHHHHHhhhcccchhcc
Confidence 233344455544 23456677664 788886 221 11 1112223 56667776554
Q ss_pred --cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH--------------------Hhc
Q psy14495 191 --KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA--------------------RFI 248 (766)
Q Consensus 191 --~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~--------------------~~a 248 (766)
.+...||+|+|+|.+|.++++.+...|.. ++++|++.- | +...+. .|+
T Consensus 167 ~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~~~d~~~~----~---~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~ 236 (384)
T 1l7d_A 167 AGTVPPARVLVFGVGVAGLQAIATAKRLGAV---VMATDVRAA----T---KEQVESLGGKFITVDDEAMKTAETAGGYA 236 (384)
T ss_dssp TEEECCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCST----T---HHHHHHTTCEECCC---------------
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCHH----H---HHHHHHcCCeEEeecccccccccccccch
Confidence 67899999999999999999999999963 999998531 1 111111 111
Q ss_pred cccC-------CCCHHHHhccCcEEEecC---C---CCCCCHHHHHhhccCcEEEeccCC
Q psy14495 249 KDTT-------ARTLSDIIPNADIFLGLS---V---SGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 249 ~~~~-------~~~L~e~i~~~~vliG~S---~---~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
+... ...+.+.++++|++|.++ + +..+++++++.|.+..+|+-++-+
T Consensus 237 ~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~ 296 (384)
T 1l7d_A 237 KEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE 296 (384)
T ss_dssp --------CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred hhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecC
Confidence 1100 112788888999999988 2 246899999999999999999964
No 22
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.55 E-value=3.4e-07 Score=103.44 Aligned_cols=130 Identities=18% Similarity=0.261 Sum_probs=107.1
Q ss_pred cCCCcEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 160 HMKIPVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 160 ~~~~~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+.+|+| +|+++||+..++.++. |.++..|.+.+++|.|+|..|.++|+.|...|. +++++|++
T Consensus 224 ~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA---~Viv~D~~ 297 (488)
T 3ond_A 224 TLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA---RVIVTEID 297 (488)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CCCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 5789999 7899999999999886 688999999999999999999999999999997 48888874
Q ss_pred ccccCCCCCCCcHHHHHhcc--ccCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhc
Q psy14495 230 GVLYKGRSELMDSNKARFIK--DTTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIKS 306 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~~~a~--~~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~ 306 (766)
. .+...+. ..+..++.++++.+|+++-.++ .+.++.+.++.|.+..+|+-.+++..|+..++...
T Consensus 298 ~------------~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~ 365 (488)
T 3ond_A 298 P------------ICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLET 365 (488)
T ss_dssp H------------HHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHT
T ss_pred H------------HHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHH
Confidence 2 1111111 1123568888889999998776 78999999999999999999999988888876655
Q ss_pred c
Q psy14495 307 V 307 (766)
Q Consensus 307 ~ 307 (766)
+
T Consensus 366 ~ 366 (488)
T 3ond_A 366 H 366 (488)
T ss_dssp S
T ss_pred h
Confidence 4
No 23
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=98.44 E-value=1.8e-05 Score=84.82 Aligned_cols=280 Identities=15% Similarity=0.185 Sum_probs=175.6
Q ss_pred cEEEEecCC----CHHH-HHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECC----CCCcchhH--HH
Q psy14495 452 KRIIYSEGE----EEKI-LRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDP----DFNKQYKD--YW 520 (766)
Q Consensus 452 krIv~~e~~----d~~v-L~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~----~~~~~~~~--~~ 520 (766)
++|++.-|+ -|++ +++.. +...++|+++|+++.+++.++.+++++ .++.++. .+...... ..
T Consensus 3 ~~iaIT~GDpaGIGpEii~ka~~---~~~~~~~vv~Gd~~~l~~~~~~l~~~~----~~~~i~~~~~~~~~~~~g~l~vl 75 (328)
T 1yxo_A 3 LRFALTPGEPAGIGPDLCLLLAR---SAQPHPLIAIASRTLLQERAGQLGLAI----DLKDVSPAAWPERPAKAGQLYVW 75 (328)
T ss_dssp CCEEEECCSTTSSHHHHHHHHTT---SCCSSCEEEEECHHHHHHHHHHHTCCC----EEEECBTTBCCSSCCCTTEEEEE
T ss_pred CEEEEcCCCCcchhHHHHHHHhc---ccCCCCEEEEECHHHHHHHHHHcCCCC----eeEEcccccCcccccCCCceeEe
Confidence 457777554 2344 33321 212578999999999999888888654 2444431 11000000 00
Q ss_pred H-HH-HHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHH-------HHHhccCCCccceeE
Q psy14495 521 K-TY-LSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYI-------DQIIGKKNKTNIYAA 591 (766)
Q Consensus 521 ~-~~-~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~-------~~iig~~~g~~~~s~ 591 (766)
+ .. ....-++ .|.+..+..+ .++-.|++++++|++|++|.+-++- ..+..+ ...+....|.+. .
T Consensus 76 ~~~~~~~~~~G~-~~~~~g~~a~--~~l~~A~~~~~~G~~dalVTaPi~K--~~i~~aG~~f~GhTE~la~~~g~~~--~ 148 (328)
T 1yxo_A 76 DTPLAAPVRPGQ-LDRANAAYVL--ETLTRAGQGCLDGHFAGMITAPVHK--GVINEAGIPFSGHTEFLADLTHTAQ--V 148 (328)
T ss_dssp ECCCSSCCCTTC-CCGGGHHHHH--HHHHHHHHHHHTTSCSEEEECCCCH--HHHHHTTCCCCCHHHHHHHHTTCSC--C
T ss_pred ccCcccCCCCCC-cCHHHHHHHH--HHHHHHHHHHHcCCCCEEEECCCCH--HHHHhcCCCCCCHHHHHHHHhCCCC--e
Confidence 0 00 0000011 2333333222 2555799999999999999998763 322211 111212223222 1
Q ss_pred EEEEEeCCCe-EEEEeccccC-----CCCHHHHHHHHHHHHHHHHH-cCCC-CeEEEee----CccCCCCCCcchHHHHH
Q psy14495 592 MSNLILMDRQ-LMLVDTHINE-----NPNAEELSEITILAAKKMFS-LGLK-PRVALLS----NSNFGSNNNISAHKMRT 659 (766)
Q Consensus 592 ~~i~~~~~~~-~~l~D~g~Ni-----~P~~e~L~~ia~~aa~~a~~-lGi~-PkVAlLS----~s~~gs~~~~~~~~vre 659 (766)
+.++-. +++ +++.=..+-. .-|.|.+.+.+....+..+. ||++ ||+|++. ++|.|.-..+..+.+.-
T Consensus 149 ~Mml~~-~~LrV~lvT~HipL~~V~~~it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~P 227 (328)
T 1yxo_A 149 VMMLAT-RGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEP 227 (328)
T ss_dssp EEEEEE-TTEEEEESSCSCCHHHHHHHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGTTTTTCSHHHHTHHH
T ss_pred EEEEec-CCcEEEEeccCccHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCCCCCCCCCHhHHHHHHH
Confidence 233333 232 2222222211 25888999999999997777 9998 9999986 46766644556666778
Q ss_pred HHHHHHccCCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccccccCCcc
Q psy14495 660 ALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKP 739 (766)
Q Consensus 660 A~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~P 739 (766)
|.+.++++ ++.+.||+..|....+... |+.|.+|.--=|-|-|-+|++-. +.+. -+-+|+ |
T Consensus 228 ai~~~r~~--Gi~~~GP~paDT~F~~~~~----------~~~D~vlaMYHDQGlip~K~l~F--~~gV---NvTlGL--P 288 (328)
T 1yxo_A 228 CLERLRGE--GLDLIGPLPADTLFTPKHL----------EHCDAVLAMYHDQGLPVLKYKGF--GAAV---NVTLGL--P 288 (328)
T ss_dssp HHHHHHTT--TCEEEEEECHHHHTSHHHH----------TTCSEEEESSHHHHHHHHHHHHT--TSCE---EEEESS--S
T ss_pred HHHHHHHC--CCceeCCCCchhhcccccc----------cCCCEEEEcccccccHhHhhccc--Ccce---EEecCC--C
Confidence 88888875 6889999999999887765 78899999888999999999884 3332 266787 7
Q ss_pred EEecC------------CCCCHHHHHHHHHHHHHHHhc
Q psy14495 740 IHILT------------SSATVRRIVNMTALCVIDALS 765 (766)
Q Consensus 740 Vv~~s------------r~~s~~~i~n~ialA~~~a~~ 765 (766)
++-|| +-++..+..+++.+|+.+++.
T Consensus 289 ~iRTSvDHGTAfDIAGkG~A~~~Sl~~Ai~~A~~~a~~ 326 (328)
T 1yxo_A 289 IIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAAS 326 (328)
T ss_dssp SCEEEECSCCCGGGTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCccccccCCCCCChHHHHHHHHHHHHHHhh
Confidence 77766 778999999999999988865
No 24
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=98.34 E-value=4.7e-06 Score=90.85 Aligned_cols=282 Identities=10% Similarity=0.103 Sum_probs=163.2
Q ss_pred cEEEEecCC----CHH-HHHHHHHHHH-----------cCCcEEEEEcCHHHHHHHHHhcCcCCCCCCCeEEECCCCCcc
Q psy14495 452 KRIIYSEGE----EEK-ILRAIQVVID-----------ENLAFPILIGRTKILEQHIKKLRLRIKPGIHFEIIDPDFNKQ 515 (766)
Q Consensus 452 krIv~~e~~----d~~-vL~Aa~~a~~-----------eg~~~~ILvG~~~~I~~~~~~~~l~l~~~~~~eIid~~~~~~ 515 (766)
.+|++.-|+ -++ ++++..+... .....++++|+++.+++.++.+++++. +++++..+...
T Consensus 9 ~kIaIT~GDPaGIGpEIilKa~~~~~~~~~~~~~~~~i~~~~~~vligd~~~L~~~ak~l~~~~~----i~~i~~~~~~~ 84 (349)
T 4aty_A 9 MTVALAIGDPNGIGPEIAVKAAAQMARDERSEHGGHAVHSQPRIVLFGDAFVIRRYARQCCPELM----LRLVQLDDLPS 84 (349)
T ss_dssp CCEEEECCCTTSSHHHHHHHHHHCC---------------CC-CEEEECHHHHHHHHHHHC--CC----CEEC-----CC
T ss_pred CeEEEECCCcchhHHHHHHHHHHhhcccccccccchhhccCCCEEEEeCHHHHHHHHHHcCCCce----eeecccccccc
Confidence 689998765 234 4455443221 134679999999999999998876542 44443322111
Q ss_pred hhHH-------HH-HHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHH-HHHHH------h
Q psy14495 516 YKDY-------WK-TYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLN-YIDQI------I 580 (766)
Q Consensus 516 ~~~~-------~~-~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~-~~~~i------i 580 (766)
.+.- +. +.....-+ -.+.+.++..+ .+.-.|+.++++|++|++|.|=++- ..+. ..... +
T Consensus 85 ~~~~~i~vl~v~~~~~~~~~~G-~~s~~~g~~~~--~sl~~A~~l~~~g~~~alVT~PInK--~~i~~ag~~f~GhTEyL 159 (349)
T 4aty_A 85 AEPNAIDMVDVASLPAEAFVPG-EVAAAAGTATL--AYVSAALRAARAGQVDAVIACPHSE--TAINASGVRFAGYPGFV 159 (349)
T ss_dssp C----CEEEECCCSCGGGCCTT-CCCHHHHHHHH--HHHHHHHHHHHTTSCSEEEECCCCH--HHHHHHC---CCHHHHH
T ss_pred cCcCccceecccccCchhcccC-ccCchhhHHHH--HHHHHHHHHHHcCCCceEEecchhh--hHHHhcCCCCCCchHHh
Confidence 0000 00 00000001 13455544443 3667899999999999999998763 3333 32222 2
Q ss_pred ccCCCccceeEEEEEEeCCCeEEEEeccccC-----CCCHHHHHHHHHHHHHHHHHcCCC-CeEEEee----CccCCCCC
Q psy14495 581 GKKNKTNIYAAMSNLILMDRQLMLVDTHINE-----NPNAEELSEITILAAKKMFSLGLK-PRVALLS----NSNFGSNN 650 (766)
Q Consensus 581 g~~~g~~~~s~~~i~~~~~~~~~l~D~g~Ni-----~P~~e~L~~ia~~aa~~a~~lGi~-PkVAlLS----~s~~gs~~ 650 (766)
...-|...-..+.+|-..+=.+...=+.+-+ .-+.+.+.+.+....+..+.||+. ||+|++. ++|.|.-.
T Consensus 160 a~~~~~~~~~~~Mml~~~~LrV~~vTtHipLk~V~~~It~~~I~~~i~~~~~~l~~fgi~~PrIaV~GLNPHaGE~G~~G 239 (349)
T 4aty_A 160 AHEMGMPAEDVYLLLIGGGLRIVHATLHEGIASALARLDQRHVERAARAAVQALQLMGIAHPVVGLMGINPHAGEGGLFG 239 (349)
T ss_dssp HHHTTSCGGGSEEEEEETTEEEEESSCSSCHHHHHHHCCHHHHHHHHHHHHHHHHHTC-CCCCEEEECSSGGGGTTTTTC
T ss_pred hhhcccCCcchhhhhcCCCcceeecccccchhcchhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCcccccc
Confidence 2222221111122332222112222222111 236677888888888888889998 9999997 46665433
Q ss_pred CcchHHHHHHHHHHHccCCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccc
Q psy14495 651 NISAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIG 730 (766)
Q Consensus 651 ~~~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G 730 (766)
.+..+.+.=|.+.++++ ++.+.||+..|.+..+ ++.|++|.===|-|=+-+|++-. . .+.
T Consensus 240 ~EE~~iI~Pai~~l~~~--gi~v~GP~paDt~F~~-------------~~~D~vlaMYHDQgl~p~K~l~f-~-~~v--- 299 (349)
T 4aty_A 240 RDDIDITEPVARKLRDD--GMTVIGPQGADLLLTN-------------PDIDVFVAMYHDQGHIPVKLRAG-R-HSA--- 299 (349)
T ss_dssp SHHHHTHHHHHHHHHHC---CCEEEEECHHHHTTC-------------TTCSEEEESSHHHHHHHHHHHHT-T-SEE---
T ss_pred chHHHHHHHHHHHHHHC--CCeEeCCCchhhhhcc-------------CCCCEEEEcccccchHHHHhccc-C-CcE---
Confidence 34444455677777764 6789999999977731 35799999888899999999885 3 222
Q ss_pred cccccCCccEEecC------------CCCCHHHHHHHHHHHHHHHh
Q psy14495 731 PILLGCSKPIHILT------------SSATVRRIVNMTALCVIDAL 764 (766)
Q Consensus 731 ~iLlGl~~PVv~~s------------r~~s~~~i~n~ialA~~~a~ 764 (766)
-+-+|+ |++-+| +-++..+..+++.+|+-++.
T Consensus 300 nitlGL--p~iRtS~dHGta~diagkg~a~~~s~~~Ai~~a~~~~~ 343 (349)
T 4aty_A 300 ALSIGA--GVLFSSVGHGSGFDIAGTLLADPAPLLGAIRLVTTGTV 343 (349)
T ss_dssp EEEESS--SSEEEECCSCCCTTSTTTTCCCCHHHHHHHHHHHHSCC
T ss_pred EEecCC--CeeEeCCCCChhhhhccCCCCChHHHHHHHHHHHHhcc
Confidence 256777 676665 35788899999999886543
No 25
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=98.28 E-value=1.1e-05 Score=86.50 Aligned_cols=269 Identities=15% Similarity=0.209 Sum_probs=169.6
Q ss_pred EEEecCC----CHHH-HHHHHHHHHcCCcEEEEEcCHHHHHH-HHHhcCcCCCCCCCeEEEC----------------CC
Q psy14495 454 IIYSEGE----EEKI-LRAIQVVIDENLAFPILIGRTKILEQ-HIKKLRLRIKPGIHFEIID----------------PD 511 (766)
Q Consensus 454 Iv~~e~~----d~~v-L~Aa~~a~~eg~~~~ILvG~~~~I~~-~~~~~~l~l~~~~~~eIid----------------~~ 511 (766)
|++.-|+ -|++ +++...-.... ++|+++|+++.+++ .++.+++++ .++.++ ..
T Consensus 9 iaIT~GDpaGIGpEii~ka~~~~~~~~-~~~vv~Gd~~~l~~~~~~~l~~~~----~~~~i~~~~~~~~~~g~l~vl~~~ 83 (330)
T 2hi1_A 9 VAITMGDPAGIGPEIIVKALSEDGLNG-APLVVIGCLATLKRLQAKGITPNV----ELRAIERVAEARFAPGIIHVIDEP 83 (330)
T ss_dssp EEEECCCTTTTHHHHHHHHHTSTTTTT-CSEEEEECHHHHHHHHHTTSSCCC----EEEEESSGGGCCCCTTEEEEEECC
T ss_pred EEEcCCCCcchhHHHHHHHHhchhhcC-CCEEEEeCHHHHHHHHHHhcCCCc----eeEeccCccccccCCCceeEeccC
Confidence 8887654 2344 44321111113 78999999999998 787777654 244443 11
Q ss_pred CCcchhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHHHH-------HHHhccCC
Q psy14495 512 FNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLNYI-------DQIIGKKN 584 (766)
Q Consensus 512 ~~~~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~~~-------~~iig~~~ 584 (766)
.... . ...-+ -.|.+..+..+ .++..|+.++++|++|++|.+-++- ..+..+ ...+....
T Consensus 84 ~~~~-~-------~~~~G-~~~~~~g~~a~--~~l~~A~~~~~~G~~dalVTaPi~K--~~i~~aG~~f~GHTE~la~~~ 150 (330)
T 2hi1_A 84 LAQP-E-------ALEAG-KVQAQAGDLAY--RCVKRATELALRGDVQAIATAPLNK--EALHLAGHNYPGHTELLATLT 150 (330)
T ss_dssp CSCG-G-------GCCTT-SCCHHHHHHHH--HHHHHHHHHHHTTSCSEEEECCCCH--HHHHHTTCCCSSHHHHHHHHT
T ss_pred cccc-c-------CcCCC-CCCHHHHHHHH--HHHHHHHHHHHcCCCCEEEECCCCH--HHHHhcCCCCCCHHHHHHHHh
Confidence 1100 0 00001 13445444433 2566799999999999999998763 322211 11121222
Q ss_pred CccceeEEEEEEeCCCe-EEEEeccccC-----CCCHHHHHHHHHHHHHHHHH-cCCC-CeEEEee----CccCCCCCCc
Q psy14495 585 KTNIYAAMSNLILMDRQ-LMLVDTHINE-----NPNAEELSEITILAAKKMFS-LGLK-PRVALLS----NSNFGSNNNI 652 (766)
Q Consensus 585 g~~~~s~~~i~~~~~~~-~~l~D~g~Ni-----~P~~e~L~~ia~~aa~~a~~-lGi~-PkVAlLS----~s~~gs~~~~ 652 (766)
|.+. .+.++-. +++ +++.=..+-. .-|.|.+.+.+..... .+. ||++ ||+|++. ++|.|.-..+
T Consensus 151 g~~~--~~Mml~~-~~LrV~lvT~HipL~~V~~~it~e~i~~~i~~~~~-L~~~fgi~~PrIaV~GLNPHAGE~G~~G~E 226 (330)
T 2hi1_A 151 HSRD--YAMVLYT-DKLKVIHVSTHIALRKFLDTLSTARVETVIGIADT-FLKRVGYVKPRIAVAGVNPHAGENGLFGDE 226 (330)
T ss_dssp TCCC--CEEEEEC-SSCEEEESCCSSCHHHHHHHCCHHHHHHHHHHHHH-HHHHTTCSSCEEEEECSSGGGSSTTSCCHH
T ss_pred CCCC--eEEEEec-CCcEEEEeecCccHHHHHHhcCHHHHHHHHHHHHH-HHHHcCCCCCCEEEEecCCCCCCCCCCCHh
Confidence 3222 1223333 332 2322222211 2588889999998888 666 9998 9999986 4666654445
Q ss_pred chHHHHHHHHHHHccCCCceEEcccchhhccCHHHHhhhCCCCccCCcccEEEeCCcchhHHHHHHHHhhcCCccccccc
Q psy14495 653 SAHKMRTALKLIQKQMPELEIDGEMNGNYALNNELLHKQIPNSKLTGDANLLVLPNIESANIAYNLLKITSGNGVAIGPI 732 (766)
Q Consensus 653 ~~~~vreA~~llk~~~~~~~vdG~l~~D~Al~~~~a~~K~~~s~vaG~AdVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~i 732 (766)
..+.+.-|.+.++++ ++.+.||+..|....+... |+.|.+|.=-=|-|-|-+|++-. +.+. -+
T Consensus 227 E~~iI~PAi~~~r~~--Gi~~~GP~paDT~F~~~~~----------~~~D~vlaMYHDQGlip~K~l~F--~~gV---Nv 289 (330)
T 2hi1_A 227 ETRILTPAITDARAK--GMDVYGPCPPDTVFLQAYE----------GQYDMVVAMYHDQGHIPLKLLGF--YDGV---NI 289 (330)
T ss_dssp HHHTHHHHHHHHHTT--TCEEEEEECHHHHHHHHHT----------TSCSEEEESSHHHHHHHHHHCC---CCSE---EE
T ss_pred HHHHHHHHHHHHHHC--CCceeCCCCchhhcccccc----------ccCCEEEEcccccccHhHhhccc--Ccce---EE
Confidence 555666788888775 6889999999988866543 78899999888999999999774 3332 26
Q ss_pred cccCCccEEecC------------CCCCHHHHHHHHHHHHHHH
Q psy14495 733 LLGCSKPIHILT------------SSATVRRIVNMTALCVIDA 763 (766)
Q Consensus 733 LlGl~~PVv~~s------------r~~s~~~i~n~ialA~~~a 763 (766)
-+|+ |++-|| +-++..+..+++.+|+.++
T Consensus 290 TlGL--P~iRTSvDHGTAfDIAGkG~A~~~Sl~~Ai~~A~~~a 330 (330)
T 2hi1_A 290 TAGL--PFIRTSADHGTAFDIAWTGKAKSESMAVSIKLAMQLA 330 (330)
T ss_dssp EETS--SSEEEEESCCCCTTTTTTTCCCCHHHHHHHHHHHHHC
T ss_pred ecCC--CEEEecCCCCccccccCCCCCChHHHHHHHHHHHHhC
Confidence 6787 888776 6788999999999987653
No 26
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.18 E-value=9.5e-06 Score=90.47 Aligned_cols=128 Identities=19% Similarity=0.157 Sum_probs=104.5
Q ss_pred cCCCcEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 160 HMKIPVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 160 ~~~~~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+.+|++ .|+.+||+-.++.|+. |.++..+...+++|+|.|..|.++|+.+...|+. ++++|.+
T Consensus 206 ~L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~---Viv~d~d 279 (464)
T 3n58_A 206 LLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGAR---VKVTEVD 279 (464)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 5789999 6888999999998885 5679999999999999999999999999999985 8888763
Q ss_pred ccccCCCCCCCcHHHHHhcc--ccCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHh
Q psy14495 230 GVLYKGRSELMDSNKARFIK--DTTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIK 305 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~~~a~--~~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~ 305 (766)
. .+...|. .....+|.|+++.+|+++-+.+ .+.++++.++.|.+..|+.-.+....|+..+...
T Consensus 280 p------------~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~ 346 (464)
T 3n58_A 280 P------------ICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALR 346 (464)
T ss_dssp H------------HHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGT
T ss_pred c------------chhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHH
Confidence 2 1111111 1123579999999999998875 7899999999999999999999988888776443
No 27
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.88 E-value=2.4e-05 Score=86.71 Aligned_cols=101 Identities=21% Similarity=0.322 Sum_probs=71.3
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCC---CC---CC-------cHHHHHhccc-c-----
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGR---SE---LM-------DSNKARFIKD-T----- 251 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r---~~---~l-------~~~k~~~a~~-~----- 251 (766)
.+...||+|+|+|.+|..+++++...|. +++++|++.-..+.. .. .+ .+-+..|++. +
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence 3678999999999999999999999997 499999975321000 00 00 0112234431 1
Q ss_pred -CCCCHHHHhccCcEEEecC------CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 252 -TARTLSDIIPNADIFLGLS------VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 252 -~~~~L~e~i~~~~vliG~S------~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
+..+|.|+++++||+|++- .+.++|+|+++.|.+..+|+-+|-
T Consensus 264 ~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred hhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 1247999999999999983 356899999999999999999995
No 28
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.74 E-value=0.00041 Score=73.39 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=101.1
Q ss_pred HHHHHHHhhcCCCcEEecC------CchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE
Q psy14495 151 FYIEKKLRNHMKIPVFHDD------QHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF 224 (766)
Q Consensus 151 f~il~~~~~~~~~~~fnDD------~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~ 224 (766)
..+.+..+++ +|+++|-. ...+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+...|+ +++
T Consensus 107 id~~~~~~~~-gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~---~V~ 182 (293)
T 3d4o_A 107 TYLNQCMKKT-NRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGA---KVK 182 (293)
T ss_dssp HHHHHHHHHH-TCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTC---EEE
T ss_pred HHHHHHHHHc-CCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCC---EEE
Confidence 4444555554 79999954 3355566666666677778889999999999999999999999999997 488
Q ss_pred EEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHhhH
Q psy14495 225 VTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDI 304 (766)
Q Consensus 225 ~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a 304 (766)
++|+.. +.....+..-++..+..+|.+.++.+|+++-....+.++++.++.|.+..+++-++....++..+.+
T Consensus 183 ~~dr~~-------~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~~~a 255 (293)
T 3d4o_A 183 VGARES-------DLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDFRYA 255 (293)
T ss_dssp EEESSH-------HHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCHHHH
T ss_pred EEECCH-------HHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCHHHH
Confidence 888742 0111111111111122468899999999997665689999999999999999999843234555444
No 29
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.61 E-value=9e-05 Score=81.47 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=70.8
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCC---CC---CCc---HHHHHhccc-------cCCCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGR---SE---LMD---SNKARFIKD-------TTART 255 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r---~~---~l~---~~k~~~a~~-------~~~~~ 255 (766)
+...||+|+|+|.+|..+++.+...|. +++++|++.--.+.- +. .++ .-...|++. .+..+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~ 258 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQA 258 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHH
Confidence 578899999999999999999999997 499999864210000 00 000 001112210 12346
Q ss_pred HHHHhccCcEEEecC------CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 256 LSDIIPNADIFLGLS------VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 256 L~e~i~~~~vliG~S------~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
|.++++.+|++|++- .+.++|+++++.|.+..+|+-+|=+.
T Consensus 259 l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~ 305 (381)
T 3p2y_A 259 LEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET 305 (381)
T ss_dssp HHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence 899999999999873 24579999999999999999999653
No 30
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=97.45 E-value=0.0095 Score=64.57 Aligned_cols=276 Identities=14% Similarity=0.138 Sum_probs=158.0
Q ss_pred cEEEEecCCC----HHH-HHHHHHHHHcCCcEEEEEcCHHHHHHHHHhcCcCCCC-------------------CCCeEE
Q psy14495 452 KRIIYSEGEE----EKI-LRAIQVVIDENLAFPILIGRTKILEQHIKKLRLRIKP-------------------GIHFEI 507 (766)
Q Consensus 452 krIv~~e~~d----~~v-L~Aa~~a~~eg~~~~ILvG~~~~I~~~~~~~~l~l~~-------------------~~~~eI 507 (766)
++|++.-|+- |++ +++..+. ...++|+++|+++.+++.++.+++++.- ...+.+
T Consensus 5 ~~iaIT~GDpaGIGpEI~~ka~~~~--~~~~~pvv~gd~~~l~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~v 82 (367)
T 3tsn_A 5 KKLAISIGDINSIGLEILVRSHEEL--SKICTPFYFIHESLLNKALKLLNLKLFNAKIVAFKDDKDYEFNFIKKENSLEI 82 (367)
T ss_dssp CEEEEECCCTTTTHHHHHHHHHHHH--TTTSEEEEECCHHHHHHHHHHHTCCCCSEEEEEEEECSSCEEEEEEECSSEEE
T ss_pred CEEEEeCCCCccchHHHHHHhhhhh--hccCCEEEEECHHHHHHHHHHcCCCceeeecccccccccccccccccCCcceE
Confidence 5888887664 555 4442211 2568999999999999998888775420 001122
Q ss_pred ECCC--CCcchhHHHHHHHHHHccCCCCHHHHHHHhhhCcHHHHHHHHHcCCccEEEecccCChHHHHH-HH------HH
Q psy14495 508 IDPD--FNKQYKDYWKTYLSMTNRKGMIEQYAQLKMRKCNTLIGAMAIHKGNADGMICGILGSTKLHLN-YI------DQ 578 (766)
Q Consensus 508 id~~--~~~~~~~~~~~~~~lr~~Kg~s~~~A~~~~~~~s~~~A~~lV~~G~AD~lvsG~~~tT~~~l~-~~------~~ 578 (766)
++.. +.....+. ..+.-+ -.+.+..+..+ .++-.|+.++++|++|++|.+-++- ..+. +. ..
T Consensus 83 ~~~~~~~~~~~~~~----~~~~~G-~~~~~~G~aa~--~~l~~A~~~~~~G~~dalVTaPI~K--~ai~~aG~~f~GHTE 153 (367)
T 3tsn_A 83 YSFCLPLGFKVDEN----FEIQAG-EIDAKSGLYGF--LSFKAASYFVYEKHAHALLTLPIHK--KAWEDAGLKYKGHTD 153 (367)
T ss_dssp EEEEECCSSCCCCC----CCCCTT-CCCHHHHHHHH--HHHHHHHHHHHTTSSSEEEECCCCH--HHHHHTTCCCCSHHH
T ss_pred eecccccccccccc----CCCCCC-ccCHHHHHHHH--HHHHHHHHHHHcCCCCEEEECCcCH--HHHHhCCCCCCCcHH
Confidence 1100 00000000 000001 13444444333 2566799999999999999987763 2222 11 01
Q ss_pred HhccCCCccceeEEEEEEeCCCeEEEEeccccC-----CCCHHHHHHHHHHHHHHHHHcCCCCeEEEee----CccCCCC
Q psy14495 579 IIGKKNKTNIYAAMSNLILMDRQLMLVDTHINE-----NPNAEELSEITILAAKKMFSLGLKPRVALLS----NSNFGSN 649 (766)
Q Consensus 579 iig~~~g~~~~s~~~i~~~~~~~~~l~D~g~Ni-----~P~~e~L~~ia~~aa~~a~~lGi~PkVAlLS----~s~~gs~ 649 (766)
.+....|.+ . +.++-..+=.+++.=..+-. .-|.|.+.+.+..... .+ -.||+|++. ++|.|.-
T Consensus 154 ~La~~~g~~--~-~MmL~~~~LrV~lvT~HipL~~V~~~iT~e~i~~~i~~~~~---~l-~~PrIaV~GLNPHAGE~G~~ 226 (367)
T 3tsn_A 154 ALRDFFKKN--A-IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYK---ET-HFKKMGLLGFNPHAGDYGVI 226 (367)
T ss_dssp HHHHHHSCC--C-EEEEEETTEEEEESSCSSCGGGHHHHCCHHHHHHHHHHHHH---HH-CCSSBEEBCSSGGGGTTTTS
T ss_pred HHHHHhCCC--c-eEEEccCCcEEEEecccccHHHHHHHhCHHHHHHHHHHHHh---hc-CCCcEEEEecCCCCCCCCCC
Confidence 111111222 2 22333333122222222222 2366777766553322 22 159999994 5777764
Q ss_pred CCcchHHHHHHHHHHHccCC---------------------CceEEc-------ccchhhccCHHHHhhhCCCCccCCcc
Q psy14495 650 NNISAHKMRTALKLIQKQMP---------------------ELEIDG-------EMNGNYALNNELLHKQIPNSKLTGDA 701 (766)
Q Consensus 650 ~~~~~~~vreA~~llk~~~~---------------------~~~vdG-------~l~~D~Al~~~~a~~K~~~s~vaG~A 701 (766)
..+..+.+.-|.+.++++.. ++.+.| |+..|....+... |+.
T Consensus 227 G~EE~~iI~PAI~~~r~~~g~~~~~~~~~~~~~~~~~~~~~Gi~~~G~gi~~~~P~paDT~F~~~~~----------~~~ 296 (367)
T 3tsn_A 227 GGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGKGVYLPYPLVADTAFTKTGL----------KNC 296 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTTCHHHHHHHHHTCCSCCSBCSSCBCHHHHTSHHHH----------HHC
T ss_pred cHHHHHHHHHHHHHHHhhhccccccccccccccccccccccceEEeccccCCCCCcCchhhhccchh----------cCC
Confidence 45666667778877775310 234555 9999999887765 778
Q ss_pred cEEEeCCcchhHHHHHHHHhhcCCccccccccccCCccEEecC------------C-CCCHHHHHHHHHHHHHH
Q psy14495 702 NLLVLPNIESANIAYNLLKITSGNGVAIGPILLGCSKPIHILT------------S-SATVRRIVNMTALCVID 762 (766)
Q Consensus 702 dVLV~Pnl~aGNi~~K~l~~~~~~~~~~G~iLlGl~~PVv~~s------------r-~~s~~~i~n~ialA~~~ 762 (766)
|.+|.=-=|-|-|-+|++-. +.+. -+-+|+ |++-|| + -++..+..+++.+|+.+
T Consensus 297 D~vlAMYHDQGliplK~l~F--~~gV---NvTlGL--P~IRTSvDHGTAfDIAGkG~~Ad~~Sl~~Ai~~A~~~ 363 (367)
T 3tsn_A 297 NRLVAMYHDLALAPLKALYF--DKSI---NVSLNL--PIIRVSVDHGTAFDKAYKNAKINTKSYFEAAKFAINL 363 (367)
T ss_dssp CEEEESSHHHHHHHHHHHCT--TTCE---EEEESS--SSCEEECCCCSCTTSCSSCCCCCCHHHHHHHHHHHHS
T ss_pred CEEEEccccCcchhhhhccc--CccE---EEecCC--CeeeecCCCCcchhhcCCCCcCChHHHHHHHHHHHHh
Confidence 99999888999999999874 3332 255676 665554 4 57778888888888754
No 31
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.14 E-value=0.0034 Score=66.39 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=79.8
Q ss_pred hHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcE
Q psy14495 186 KLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADI 265 (766)
Q Consensus 186 ~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~v 265 (766)
+..+..+...+++|+|+|..|..+|+.+...|. +++++|+.- . .....+..-++..+..+|.|.++++|+
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~---~V~~~d~~~----~---~~~~~~~~g~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGA---NVKVGARSS----A---HLARITEMGLVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSH----H---HHHHHHHTTCEEEEGGGHHHHSTTCSE
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCC---EEEEEECCH----H---HHHHHHHCCCeEEchhhHHHHhhCCCE
Confidence 446789999999999999999999999999997 499888741 0 111111111111123468999999999
Q ss_pred EEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHhhH
Q psy14495 266 FLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPEDI 304 (766)
Q Consensus 266 liG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a 304 (766)
++-....+.++++.++.|.+..+++-++.-..+|..+.+
T Consensus 219 Vi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~~~a 257 (300)
T 2rir_A 219 CINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDFKYA 257 (300)
T ss_dssp EEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCHHHH
T ss_pred EEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCHHHH
Confidence 997766789999999999999999999864334555444
No 32
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.02 E-value=0.00099 Score=70.19 Aligned_cols=177 Identities=17% Similarity=0.192 Sum_probs=103.1
Q ss_pred HHhhhcCCCc--cccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHH------HHhhcCCCcEEecCC-chhH
Q psy14495 104 LFKKFAGIDV--FDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEK------KLRNHMKIPVFHDDQ-HGTA 174 (766)
Q Consensus 104 ly~~~~gi~~--l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~------~~~~~~~~~~fnDD~-qGTa 174 (766)
.|..+ |||. .++.+..++.+++++.++. ++|.+++..==-...++.+++ +--...+..+++|.. .|+-
T Consensus 33 ~~~~~-gi~~~y~~~~~~~~~l~~~i~~l~~--~~~~G~nVtiP~k~~i~~~~d~~~~~a~~igavnt~~~~~g~l~g~n 109 (287)
T 1nvt_A 33 AFKDK-GLNYVYVAFDVLPENLKYVIDGAKA--LGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYN 109 (287)
T ss_dssp HHHHT-TCCEEEEEEECCGGGGGGHHHHHHH--HTCCEEEECTTSTTGGGGGCSEECHHHHHHTCCCEEEEETTEEEEEC
T ss_pred HHHHc-CCCcEEEEEEcCHHHHHHHHHHHHh--CCCCEEEEccCCHHHHHHHHHhcCHHHHHhCceeeEEeeCCEEEEec
Confidence 45555 7884 3444444556666666654 367676555322333333333 112233434444442 4521
Q ss_pred HHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-----
Q psy14495 175 IIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----- 249 (766)
Q Consensus 175 ~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----- 249 (766)
. ...|++.+|+..+.+++..+++|+|||.+|.+++..|.+.| +++++|++. + ........+..
T Consensus 110 T-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~G----~V~v~~r~~----~---~~~~l~~~~~~~~~~~ 177 (287)
T 1nvt_A 110 T-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN----NIIIANRTV----E---KAEALAKEIAEKLNKK 177 (287)
T ss_dssp C-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS----EEEEECSSH----H---HHHHHHHHHHHHHTCC
T ss_pred C-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHCC----CEEEEECCH----H---HHHHHHHHHhhhcccc
Confidence 1 67899999998888999999999999999999999999999 599988741 1 12222222211
Q ss_pred ---ccCCCCHHHHhccCcEEEecCCCCCCCH----HH--HHhhccCcEEEecc-CC
Q psy14495 250 ---DTTARTLSDIIPNADIFLGLSVSGVLKK----EM--VLQMAKNPIILALA-NP 295 (766)
Q Consensus 250 ---~~~~~~L~e~i~~~~vliG~S~~g~ft~----ev--v~~M~~~PiIfaLs-NP 295 (766)
..+..++.+.+..+|++|-+...+.+.. .+ ...+.+..+++-++ ||
T Consensus 178 ~~~~~d~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 178 FGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp HHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSS
T ss_pred cceeEEEeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCC
Confidence 0111223555667899998775333210 01 12334566777776 54
No 33
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.99 E-value=0.0063 Score=68.02 Aligned_cols=204 Identities=19% Similarity=0.178 Sum_probs=126.0
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCccc---cccccCCCCc--hHHHHHHHhhcC-C
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETD---PDKLCD-IIFSLEPTFGG---INLEDIKAPE--CFYIEKKLRNHM-K 162 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g~---i~~ED~~~~~--af~il~~~~~~~-~ 162 (766)
+.++-|| +++|+. .+++.-.... .+.|.. ++..+.+..|. |-=+|++..- ---+.+.|+... .
T Consensus 117 a~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~ 196 (456)
T 3r3j_A 117 GFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNS 196 (456)
T ss_dssp HHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCc
Confidence 5556664 334666 2333222222 344444 56666655543 5667776532 122455665321 1
Q ss_pred Cc-EE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 163 IP-VF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 163 ~~-~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
.+ |+ ..--.-||-=+.-++-.+++..|.+|++.||+|-|.|..|...|+.|.+.|.+ =+.+.|++|-
T Consensus 197 ~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~Gak--vVavsD~~G~ 274 (456)
T 3r3j_A 197 FEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAI--VLTMSDSNGY 274 (456)
T ss_dssp CCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCC--BCCEECSSCE
T ss_pred ccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCc
Confidence 11 11 11223467667777788888889999999999999999999999999999977 3459999999
Q ss_pred ccCCCCCCCcHHHHH---------------hccc-cCC--CCHHHHhc-cCcEEEecCCCCCCCHHHHHhhc--cCcEEE
Q psy14495 232 LYKGRSELMDSNKAR---------------FIKD-TTA--RTLSDIIP-NADIFLGLSVSGVLKKEMVLQMA--KNPIIL 290 (766)
Q Consensus 232 v~~~r~~~l~~~k~~---------------~a~~-~~~--~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~--~~PiIf 290 (766)
|+... .++..+.. |+.. +.. -+-.+... .+|||+-+..++.+|++-++.+. +-++|.
T Consensus 275 iyd~~--Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~ 352 (456)
T 3r3j_A 275 ILEPN--GFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCATQNEINENDADLFIQNKCKMIV 352 (456)
T ss_dssp EECTT--CCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSCTTCBCHHHHHHHHHHTCCEEE
T ss_pred EECCC--CCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCCccchhhHHHHHHHhcCCeEEE
Confidence 99754 46543322 1100 000 01112222 36999999999999999999985 678888
Q ss_pred eccC-CC-CccCHhhHhcccC
Q psy14495 291 ALAN-PL-PEILPEDIKSVRN 309 (766)
Q Consensus 291 aLsN-Pt-~E~~pe~a~~~~~ 309 (766)
--+| |+ || +++.+..+|
T Consensus 353 EgAN~p~T~e--A~~iL~~rG 371 (456)
T 3r3j_A 353 EGANMPTHIK--ALHKLKQNN 371 (456)
T ss_dssp CCSSSCBCTT--HHHHHHTTT
T ss_pred ecCCCCCCHH--HHHHHHHCC
Confidence 8888 64 33 334444443
No 34
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.96 E-value=0.005 Score=69.62 Aligned_cols=123 Identities=18% Similarity=0.319 Sum_probs=93.9
Q ss_pred cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHh
Q psy14495 168 DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARF 247 (766)
Q Consensus 168 DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~ 247 (766)
+.+.|+......|+ .+.++..+...+++|+|.|..|.++|+.+...|+. ++.+|++.. ......
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~---Viv~d~~~~----------~~~~a~ 297 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGLGAR---VYITEIDPI----------CAIQAV 297 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSCHH----------HHHHHH
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCE---EEEEeCChh----------hHHHHH
Confidence 44555555555662 35678899999999999999999999999999975 888887421 110111
Q ss_pred ccccCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhc
Q psy14495 248 IKDTTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIKS 306 (766)
Q Consensus 248 a~~~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~ 306 (766)
.......+|.|+++.+|+++.+.. .+.++++.++.|.+..+|.-.+.-..|+.-++..+
T Consensus 298 ~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 298 MEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp TTTCEECCHHHHTTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred HcCCEecCHHHHHhcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 111123579999999999998854 78999999999999999999988778888777766
No 35
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.82 E-value=0.0022 Score=68.12 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHHHhHhCCcCCCceEEEECcc-hhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc
Q psy14495 172 GTAIIVGSAILNGLKLVKKKMKDCKLVVSGAG-AAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD 250 (766)
Q Consensus 172 GTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG-~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~ 250 (766)
+-.-+|-.|++-.|+..+.+++..++||+|+| ..|.-+|.+|...|.+ +++++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs~--------------------- 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCHSK--------------------- 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT---------------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEECC---------------------
Confidence 33446788899999999999999999999999 5899999999999865 9999853
Q ss_pred cCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCC
Q psy14495 251 TTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 251 ~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
..+|.+.++.+|++|+..+ ++.+++||++ +.-+|+=++-|
T Consensus 199 --t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk---~GavVIDVgi~ 239 (301)
T 1a4i_A 199 --TAHLDEEVNKGDILVVATGQPEMVKGEWIK---PGAIVIDCGIN 239 (301)
T ss_dssp --CSSHHHHHTTCSEEEECCCCTTCBCGGGSC---TTCEEEECCCB
T ss_pred --cccHHHHhccCCEEEECCCCcccCCHHHcC---CCcEEEEccCC
Confidence 1358999999999999886 8899999975 46677766654
No 36
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.74 E-value=0.0031 Score=66.57 Aligned_cols=90 Identities=16% Similarity=0.193 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCC
Q psy14495 175 IIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTA 253 (766)
Q Consensus 175 ~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~ 253 (766)
-+|-.|++-.|+..+.+++..++|++|+|. .|..+|.+|...|.+ +++++|+ .
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs~-----------------------t 195 (285)
T 3l07_A 142 SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHRF-----------------------T 195 (285)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT-----------------------C
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeCC-----------------------c
Confidence 457788999999999999999999999876 899999999999986 8888763 1
Q ss_pred CCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEecc
Q psy14495 254 RTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALA 293 (766)
Q Consensus 254 ~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLs 293 (766)
.+|.+.++.+|++|...+ ++.+++||++ +.-+|+=++
T Consensus 196 ~~L~~~~~~ADIVI~Avg~p~~I~~~~vk---~GavVIDvg 233 (285)
T 3l07_A 196 TDLKSHTTKADILIVAVGKPNFITADMVK---EGAVVIDVG 233 (285)
T ss_dssp SSHHHHHTTCSEEEECCCCTTCBCGGGSC---TTCEEEECC
T ss_pred hhHHHhcccCCEEEECCCCCCCCCHHHcC---CCcEEEEec
Confidence 248899999999999876 8889988874 345555443
No 37
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.70 E-value=0.0048 Score=65.56 Aligned_cols=156 Identities=17% Similarity=0.207 Sum_probs=103.1
Q ss_pred cCCCccccCCCC-CCHHHHHHHHHHhC--CCccc--cccccCCCCchHHHHHHHhhcCCCcEEec----------CCchh
Q psy14495 109 AGIDVFDLEINE-TDPDKLCDIIFSLE--PTFGG--INLEDIKAPECFYIEKKLRNHMKIPVFHD----------DQHGT 173 (766)
Q Consensus 109 ~gi~~l~v~~~~-~~~~~~v~~v~~~~--p~~g~--i~~ED~~~~~af~il~~~~~~~~~~~fnD----------D~qGT 173 (766)
-||++.-+.+.. ...+|+++.+..+. |+.-+ +|+==-+.-+..++++.....-++=.||. ...|-
T Consensus 65 ~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~ 144 (300)
T 4a26_A 65 VGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPF 144 (300)
T ss_dssp TTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSC
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCC
Confidence 567754444433 25678888887775 55533 34321222233333333221112223331 13344
Q ss_pred HHHHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC
Q psy14495 174 AIIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT 252 (766)
Q Consensus 174 a~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~ 252 (766)
.-+|-.|++..|+..+.+++..++|++|+|. .|..+|.+|...|.+ +++++++ ..
T Consensus 145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~~~~-------T~-------------- 200 (300)
T 4a26_A 145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT---VTIVHSG-------TS-------------- 200 (300)
T ss_dssp CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT-------SC--------------
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCC-------CC--------------
Confidence 4567888999999999999999999999876 899999999999986 8989872 11
Q ss_pred CCCHH--HHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEecc
Q psy14495 253 ARTLS--DIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALA 293 (766)
Q Consensus 253 ~~~L~--e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLs 293 (766)
+|. +.++.+|++|...+ ++.++.+|++ +.-+|+=++
T Consensus 201 --~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk---~GavVIDvg 239 (300)
T 4a26_A 201 --TEDMIDYLRTADIVIAAMGQPGYVKGEWIK---EGAAVVDVG 239 (300)
T ss_dssp --HHHHHHHHHTCSEEEECSCCTTCBCGGGSC---TTCEEEECC
T ss_pred --CchhhhhhccCCEEEECCCCCCCCcHHhcC---CCcEEEEEe
Confidence 255 89999999999876 8889988873 355555543
No 38
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.69 E-value=0.0062 Score=69.08 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=87.5
Q ss_pred CchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc
Q psy14495 170 QHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK 249 (766)
Q Consensus 170 ~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~ 249 (766)
+.|+......|+ .+.+|..+...+++|+|.|..|.++|+.+...|+. ++.+|++.. ........
T Consensus 256 ~~~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~---V~v~d~~~~----------~~~~a~~~ 319 (494)
T 3d64_A 256 LYGCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGAT---VWVTEIDPI----------CALQAAME 319 (494)
T ss_dssp HHHHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEECSCHH----------HHHHHHTT
T ss_pred hHhhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHHCCCE---EEEEeCChH----------hHHHHHHc
Confidence 344444444552 35688899999999999999999999999999975 888887421 11011111
Q ss_pred ccCCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhH
Q psy14495 250 DTTARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDI 304 (766)
Q Consensus 250 ~~~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a 304 (766)
.....+|.|+++.+|+++.... .+.+++++++.|.+.-+|.-.+....|+.-+..
T Consensus 320 G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 320 GYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp TCEECCHHHHTTTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred CCEeCCHHHHHhcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 1123479999999999998854 789999999999999999988887666554433
No 39
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.67 E-value=0.0067 Score=68.08 Aligned_cols=168 Identities=18% Similarity=0.220 Sum_probs=110.0
Q ss_pred HHHHH-HHHHhCCCccc---cccccCCCC--chHHHHHHHhhcCC--------CcEE----ecCCchhHHHHHHHHHHHH
Q psy14495 124 DKLCD-IIFSLEPTFGG---INLEDIKAP--ECFYIEKKLRNHMK--------IPVF----HDDQHGTAIIVGSAILNGL 185 (766)
Q Consensus 124 ~~~v~-~v~~~~p~~g~---i~~ED~~~~--~af~il~~~~~~~~--------~~~f----nDD~qGTa~v~lA~ll~al 185 (766)
+.|.+ ++.++.+..|. |-=+|++.. .---+.+.|+...+ -|.- .++-.-||-=+.-++-.++
T Consensus 164 ~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l 243 (470)
T 2bma_A 164 LKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVL 243 (470)
T ss_dssp HHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHH
Confidence 34555 56677765553 667788753 12234566653111 1111 1222346666666777888
Q ss_pred hHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE-EEcCCccccCCCCCCCcHHHH---------------Hhcc
Q psy14495 186 KLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF-VTDLAGVLYKGRSELMDSNKA---------------RFIK 249 (766)
Q Consensus 186 ~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~-~~D~~Glv~~~r~~~l~~~k~---------------~~a~ 249 (766)
+..|.+|+..||+|-|.|..|...|+.|.+.|.+ ++ +.|++|-|+... .++..+. .|+.
T Consensus 244 ~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~Gak---vVavsD~~G~i~dp~--Gid~edl~~l~~~k~~~~g~v~~~~~ 318 (470)
T 2bma_A 244 KSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVK---VLTLSDSNGYVYEPN--GFTHENLEFLIDLKEEKKGRIKEYLN 318 (470)
T ss_dssp HTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCE---ECEEEETTEEEECSS--CCCHHHHHHHHHHHTTTTCCGGGGGG
T ss_pred HhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCE---EEEEEeCCceEECCC--CCCHHHHHHHHHHHHhcCCcHHHHHh
Confidence 8889999999999999999999999999999976 55 899999988754 4533311 1111
Q ss_pred cc-CC--CCHHHHhc-cCcEEEecCCCCCCCHHHHHhhc--cCcEEEeccC-CC
Q psy14495 250 DT-TA--RTLSDIIP-NADIFLGLSVSGVLKKEMVLQMA--KNPIILALAN-PL 296 (766)
Q Consensus 250 ~~-~~--~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~--~~PiIfaLsN-Pt 296 (766)
.. .. -+-.+... .+|||+-+..++.+|++-.+.+. .-.+|.--+| |+
T Consensus 319 ~~~~a~~v~~~~~~~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 319 HSSTAKYFPNEKPWGVPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPS 372 (470)
T ss_dssp TCSSCEECSSCCTTSSCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCB
T ss_pred hcCCcEEecCcCeeecCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCC
Confidence 00 00 00012222 36999999999999999999984 6678888888 54
No 40
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.61 E-value=0.015 Score=64.94 Aligned_cols=193 Identities=18% Similarity=0.188 Sum_probs=122.6
Q ss_pred hhhHHHHhh-hcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCccc---cccccCCCCch--HHHHHHHh---h
Q psy14495 99 EGKAVLFKK-FAGID------VFDLEINETD---PDKLCD-IIFSLEPTFGG---INLEDIKAPEC--FYIEKKLR---N 159 (766)
Q Consensus 99 ~gK~~ly~~-~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g~---i~~ED~~~~~a--f~il~~~~---~ 159 (766)
.+.++-||. ++|++ .+++.-.... .+.|.. ++..+.+..|. |--.|+...-. --+...|+ .
T Consensus 112 La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~ 191 (450)
T 4fcc_A 112 LGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSN 191 (450)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccC
Confidence 355666663 46665 2333222223 344443 45666666654 66677764321 12344443 2
Q ss_pred cCCCcEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 160 HMKIPVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 160 ~~~~~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
. .-.|| .+.-.-||-=+.-++-.+++..+.+|+..||+|-|.|..|...|+.|.+.|.+ =+.+-|++
T Consensus 192 ~-~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~Gak--vVavsD~~ 268 (450)
T 4fcc_A 192 N-TACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGAR--VITASDSS 268 (450)
T ss_dssp C-CSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCE--EEEEEETT
T ss_pred C-CceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCe--EEEEecCC
Confidence 2 11222 13334477777788888999999999999999999999999999999999976 46678999
Q ss_pred ccccCCCCCCCcHHHHHhcc---ccCCCCHHH--------------Hhc-cCcEEEecCCCCCCCHHHHHhhcc--CcEE
Q psy14495 230 GVLYKGRSELMDSNKARFIK---DTTARTLSD--------------IIP-NADIFLGLSVSGVLKKEMVLQMAK--NPII 289 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~~~a~---~~~~~~L~e--------------~i~-~~~vliG~S~~g~ft~evv~~M~~--~PiI 289 (766)
|-|+... .++..+..... ......+.+ ... .+|||+-+...+.+|++-++.+.. -.+|
T Consensus 269 G~i~d~~--Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~I 346 (450)
T 4fcc_A 269 GTVVDES--GFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAV 346 (450)
T ss_dssp EEEECTT--CCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCTTCBCHHHHHHHHHTTCCEE
T ss_pred ceEEeCC--CCCHHHHHHHHHHhcccCCccccccccCCcEEecCcccccCCccEEeeccccccccHHHHHHHHhcCceEE
Confidence 9998754 45544322111 111111211 112 369999999999999999999975 3677
Q ss_pred EeccC-CC
Q psy14495 290 LALAN-PL 296 (766)
Q Consensus 290 faLsN-Pt 296 (766)
.-=+| |+
T Consensus 347 aEgAN~p~ 354 (450)
T 4fcc_A 347 AEGANMPT 354 (450)
T ss_dssp ECCSSSCB
T ss_pred ecCCCCCC
Confidence 77777 53
No 41
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.56 E-value=0.0049 Score=65.00 Aligned_cols=90 Identities=17% Similarity=0.252 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC
Q psy14495 174 AIIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT 252 (766)
Q Consensus 174 a~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~ 252 (766)
.-+|-.|++..|+..+.+++..++|++|+|. .|..+|.+|...|.+ +++++|+
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~~----------------------- 193 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHIK----------------------- 193 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT-----------------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCC-----------------------
Confidence 4467888999999999999999999999876 899999999999986 8888863
Q ss_pred CCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEec
Q psy14495 253 ARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 253 ~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaL 292 (766)
..+|.+.++.+|++|...+ ++.++.||++. .-+|+=+
T Consensus 194 t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~---GavVIDV 231 (285)
T 3p2o_A 194 TKDLSLYTRQADLIIVAAGCVNLLRSDMVKE---GVIVVDV 231 (285)
T ss_dssp CSCHHHHHTTCSEEEECSSCTTCBCGGGSCT---TEEEEEC
T ss_pred chhHHHHhhcCCEEEECCCCCCcCCHHHcCC---CeEEEEe
Confidence 1248899999999998876 88899888743 4455544
No 42
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.53 E-value=0.0019 Score=67.93 Aligned_cols=129 Identities=14% Similarity=0.161 Sum_probs=81.8
Q ss_pred ccchhhhH-----HHHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhh------cC
Q psy14495 95 KPVMEGKA-----VLFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRN------HM 161 (766)
Q Consensus 95 ~~i~~gK~-----~ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~------~~ 161 (766)
-||.-+++ ..|.++ |+| ..++.+..++.+++++.++. +.|.++|.--=-...+++++++..+ .-
T Consensus 10 ~Pi~hS~SP~~hn~~f~~~-gl~~~Y~~~~v~~~~l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAv 86 (272)
T 3pwz_A 10 RPINHTKSPLIHGLFAQAS-NQQLEYGAIEGSLDDFEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAA 86 (272)
T ss_dssp SSCTTCSHHHHHHHHHHHT-TCCEEEEEEECCTTTHHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCC
T ss_pred CCcCCcccHHHHHHHHHHc-CCCcEEEEEEcCHHHHHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCcc
Confidence 45544444 334443 888 45666666778888887764 5676654333222234444332211 11
Q ss_pred CCcEEecC-CchhHHHHHHHHHHH-HhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 162 KIPVFHDD-QHGTAIIVGSAILNG-LKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 162 ~~~~fnDD-~qGTa~v~lA~ll~a-l~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..++.|+ .+|.-.= ..|++.+ |+..+.++++.+++|+|||.+|-+++..|.+.|+. +++++++.
T Consensus 87 NTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~--~v~i~~R~ 153 (272)
T 3pwz_A 87 NALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPS--ELVIANRD 153 (272)
T ss_dssp SEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCS--EEEEECSC
T ss_pred ceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCC--EEEEEeCC
Confidence 21233333 2442222 3578888 88888899999999999999999999999999986 79988873
No 43
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.53 E-value=0.012 Score=65.42 Aligned_cols=193 Identities=16% Similarity=0.203 Sum_probs=126.9
Q ss_pred hhhHHHHhh-hcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCcc---ccccccCCCCc-hH-HHHHHHhhcCC
Q psy14495 99 EGKAVLFKK-FAGID------VFDLEINETD---PDKLCD-IIFSLEPTFG---GINLEDIKAPE-CF-YIEKKLRNHMK 162 (766)
Q Consensus 99 ~gK~~ly~~-~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g---~i~~ED~~~~~-af-~il~~~~~~~~ 162 (766)
.++++-||. ++|++ .+++.-.... .+.|.+ +++++.+-.| .|-=+|++..- -. -+.+.|+...+
T Consensus 97 La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g 176 (424)
T 3k92_A 97 LSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLRE 176 (424)
T ss_dssp HHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhC
Confidence 355666643 46776 2333222222 334454 5777777666 36667777531 11 25567753212
Q ss_pred C---cEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 163 I---PVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 163 ~---~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
. .++ +|--.-||-=+..++-.+++..|.++++.||+|.|.|..|...|++|.+.|.+ =+.+.|++
T Consensus 177 ~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~Gak--VVavsD~~ 254 (424)
T 3k92_A 177 FDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAK--VIGISDAN 254 (424)
T ss_dssp SCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCE--EEEEECSS
T ss_pred CCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCC
Confidence 1 111 34445688888888899999999999999999999999999999999999976 45799999
Q ss_pred ccccCCCCCCCcHHH-HHhccccC--------CCCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccC-CC
Q psy14495 230 GVLYKGRSELMDSNK-ARFIKDTT--------ARTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALAN-PL 296 (766)
Q Consensus 230 Glv~~~r~~~l~~~k-~~~a~~~~--------~~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsN-Pt 296 (766)
|-|+... .|+... ..+..... .-+-.+... .+|||+-+...+.+|++-.+.+ +-.+|.--+| |+
T Consensus 255 G~iyd~~--GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~~DIliPcA~~n~I~~~~a~~l-~ak~V~EgAN~p~ 329 (424)
T 3k92_A 255 GGLYNPD--GLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKDCDILVPAAISNQITAKNAHNI-QASIVVERANGPT 329 (424)
T ss_dssp CEEECTT--CCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSCCSEEEECSCSSCBCTTTGGGC-CCSEEECCSSSCB
T ss_pred CcEECCC--CCCHHHHHHHHHHhCCCCCCCcEEecCccceeccccEEeecCcccccChhhHhhc-CceEEEcCCCCCC
Confidence 9999754 454332 12222111 112244444 3699999998899999988887 6677777777 53
No 44
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.50 E-value=0.023 Score=62.40 Aligned_cols=141 Identities=13% Similarity=0.112 Sum_probs=103.2
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEecCCc---hhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHH
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQH---GTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACL 210 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~q---GTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia 210 (766)
.|+.-.|+--..+..|- . ++..++ .+|++.|.--- .+|=-+++.+|+..|..|..+.+.+|.|+|.|..|-.+|
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D-~~~~~~-~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA 132 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-D-LDYFAE-AGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLV 132 (380)
T ss_dssp TSCCCEEEECSSCSTTB-C-HHHHHH-HTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHH
T ss_pred CCCceEEEEcCcccchh-h-HHHHHh-CCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHH
Confidence 36665566666665552 1 122333 36889886433 344468999999999999999999999999999999999
Q ss_pred HHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C--------CCCCCCHHHHH
Q psy14495 211 DLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S--------VSGVLKKEMVL 281 (766)
Q Consensus 211 ~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S--------~~g~ft~evv~ 281 (766)
+.+...|+. ++.+|+..- +. .......+|.|+++.+|+++=. . +.+.++++.+.
T Consensus 133 ~~l~~~G~~---V~~~d~~~~------------~~--~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~ 195 (380)
T 2o4c_A 133 EVLRGLGWK---VLVCDPPRQ------------AR--EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLA 195 (380)
T ss_dssp HHHHHTTCE---EEEECHHHH------------HH--STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHH
T ss_pred HHHHHCCCE---EEEEcCChh------------hh--ccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHh
Confidence 999999976 888886321 00 0111245799999999987643 1 33679999999
Q ss_pred hhccCcEEEeccC
Q psy14495 282 QMAKNPIILALAN 294 (766)
Q Consensus 282 ~M~~~PiIfaLsN 294 (766)
.|.+..++.=.|.
T Consensus 196 ~mk~gailIN~sR 208 (380)
T 2o4c_A 196 ALRPGTWLVNASR 208 (380)
T ss_dssp TSCTTEEEEECSC
T ss_pred hCCCCcEEEECCC
Confidence 9999999987775
No 45
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.49 E-value=0.0053 Score=64.77 Aligned_cols=89 Identities=20% Similarity=0.231 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCC
Q psy14495 175 IIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTA 253 (766)
Q Consensus 175 ~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~ 253 (766)
-+|-.|++..|+..+.+++..++|++|+|. .|..+|.+|...|.+ +++++|+ .
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt---Vtv~hs~-------T---------------- 195 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCT---VTVTHRF-------T---------------- 195 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCE---EEEECTT-------C----------------
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeCC-------C----------------
Confidence 457788999999999999999999999875 899999999999876 8888762 1
Q ss_pred CCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEec
Q psy14495 254 RTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 254 ~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaL 292 (766)
.+|.+.++.+|++|...+ ++.++.||++. .-+|+=+
T Consensus 196 ~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~---GavVIDv 232 (286)
T 4a5o_A 196 RDLADHVSRADLVVVAAGKPGLVKGEWIKE---GAIVIDV 232 (286)
T ss_dssp SCHHHHHHTCSEEEECCCCTTCBCGGGSCT---TCEEEEC
T ss_pred cCHHHHhccCCEEEECCCCCCCCCHHHcCC---CeEEEEe
Confidence 248899999999999876 78898888743 4444444
No 46
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.47 E-value=0.018 Score=63.94 Aligned_cols=191 Identities=15% Similarity=0.155 Sum_probs=122.8
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCccc---cccccCCCCc--hHHHHHHHhhcCCC
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETD---PDKLCD-IIFSLEPTFGG---INLEDIKAPE--CFYIEKKLRNHMKI 163 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g~---i~~ED~~~~~--af~il~~~~~~~~~ 163 (766)
++.+-|| ++.|+. .+++.-...+ .+.|.+ +++.+.+-.|. |-=+|++..- ---+.+.|+...+.
T Consensus 95 a~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~ 174 (419)
T 3aoe_E 95 AAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGS 174 (419)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCC
Confidence 5666666 456666 2333211222 344454 57777776652 6667887542 22356666431111
Q ss_pred ---cEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE-EEcCC
Q psy14495 164 ---PVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF-VTDLA 229 (766)
Q Consensus 164 ---~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~-~~D~~ 229 (766)
.++ .+.-.-||-=+.-++-.+++..|.+|+..||+|.|.|..|...|++|.+.|.+ ++ +.|++
T Consensus 175 ~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~Gak---VVavsD~~ 251 (419)
T 3aoe_E 175 TVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMR---VVAVATSM 251 (419)
T ss_dssp CCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEEETT
T ss_pred CCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCE---EEEEEcCC
Confidence 111 23334577777777888889999999999999999999999999999999976 66 99999
Q ss_pred ccccCCCCCCCcHHHH-HhccccC-C----CCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccC-CC
Q psy14495 230 GVLYKGRSELMDSNKA-RFIKDTT-A----RTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALAN-PL 296 (766)
Q Consensus 230 Glv~~~r~~~l~~~k~-~~a~~~~-~----~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsN-Pt 296 (766)
|-|+... .++..+. .+..... . -+-.++.. .+|||+-+..++.+|++-.+.+ +-.+|.--+| |+
T Consensus 252 G~i~dp~--Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DVliP~A~~n~i~~~~A~~l-~ak~V~EgAN~p~ 323 (419)
T 3aoe_E 252 GGMYAPE--GLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEVLVLAAREGALDGDRARQV-QAQAVVEVANFGL 323 (419)
T ss_dssp EEEECTT--CCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSEEEECSCTTCBCHHHHTTC-CCSEEEECSTTCB
T ss_pred CeEECCC--CCCHHHHHHHHHhhCCcceeeccchhhhccCceEEEecccccccccchHhhC-CceEEEECCCCcC
Confidence 9999764 3433221 1111111 0 01122233 4699999998899999999888 5568887777 54
No 47
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.43 E-value=0.0063 Score=64.21 Aligned_cols=164 Identities=16% Similarity=0.191 Sum_probs=96.6
Q ss_pred ccchhhhH-----HHHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHh------hcC
Q psy14495 95 KPVMEGKA-----VLFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLR------NHM 161 (766)
Q Consensus 95 ~~i~~gK~-----~ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~------~~~ 161 (766)
-||.-+++ ..|.++ |+| ..++.+..++.+++++.++. +.|.+++.--=-...+++++++.. -.-
T Consensus 16 ~Pi~hS~SP~~hn~~f~~~-gl~~~Y~~~~v~~~~l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAV 92 (281)
T 3o8q_A 16 NPINHSKSPFIHTLFARQT-QQSMIYTAQCVPVDGFTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAV 92 (281)
T ss_dssp CSSSCCCHHHHHHHHHHHT-TCCEEEEEECCCTTCHHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCC
T ss_pred CCCCccCcHHHHHHHHHHc-CCCcEEEEeecCHHHHHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCee
Confidence 45544444 345554 788 45666666778888887764 566654332211122333333221 111
Q ss_pred CCcEEecC--Cch--hHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCC
Q psy14495 162 KIPVFHDD--QHG--TAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRS 237 (766)
Q Consensus 162 ~~~~fnDD--~qG--Ta~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~ 237 (766)
+..++++| .+| |- -.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|+. ++++++++- ++
T Consensus 93 NTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~--~v~v~~R~~----~~- 162 (281)
T 3o8q_A 93 NTLKKLDDGEILGDNTD---GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPA--SITVTNRTF----AK- 162 (281)
T ss_dssp SEEEECTTSCEEEECCH---HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCS--EEEEEESSH----HH-
T ss_pred eEEEEcCCCcEEEEecH---HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCC--eEEEEECCH----HH-
Confidence 22344444 233 33 357788888888899999999999999999999999999986 799998831 11
Q ss_pred CCCcHHHHHhccc--cCCCCHHHHhccCcEEEecCCCC
Q psy14495 238 ELMDSNKARFIKD--TTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 238 ~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.......+... ....++.|..+.+|++|-+...|
T Consensus 163 --a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 163 --AEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSAS 198 (281)
T ss_dssp --HHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCC
T ss_pred --HHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCC
Confidence 12222222211 01123444446679988765444
No 48
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.42 E-value=0.0054 Score=64.37 Aligned_cols=89 Identities=9% Similarity=0.220 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhHhCCcCCCceEEEECcc-hhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC
Q psy14495 174 AIIVGSAILNGLKLVKKKMKDCKLVVSGAG-AAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT 252 (766)
Q Consensus 174 a~v~lA~ll~al~~~~~~l~d~~iv~~GaG-~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~ 252 (766)
.-+|-.|++..|+..+ ++..++|++|+| ..|..+|.+|...|.+ +++++++
T Consensus 132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAt---Vtv~~~~----------------------- 183 (276)
T 3ngx_A 132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYT---VSVCHSK----------------------- 183 (276)
T ss_dssp CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT-----------------------
T ss_pred CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCe---EEEEeCC-----------------------
Confidence 3467889999999998 999999999998 5899999999999986 8888763
Q ss_pred CCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEecc
Q psy14495 253 ARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALA 293 (766)
Q Consensus 253 ~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLs 293 (766)
..+|.+.++.+|++|...+ ++.++++|++ +.-+|+=++
T Consensus 184 t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk---~GavVIDvg 222 (276)
T 3ngx_A 184 TKDIGSMTRSSKIVVVAVGRPGFLNREMVT---PGSVVIDVG 222 (276)
T ss_dssp CSCHHHHHHHSSEEEECSSCTTCBCGGGCC---TTCEEEECC
T ss_pred cccHHHhhccCCEEEECCCCCccccHhhcc---CCcEEEEec
Confidence 1358899999999999876 7889988863 345555553
No 49
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.40 E-value=0.0048 Score=65.14 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc
Q psy14495 173 TAIIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT 251 (766)
Q Consensus 173 Ta~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~ 251 (766)
-.-+|-.|++-.|+..+.+++..++||+|+|. .|.-+|.+|...|.+ +++++|+=
T Consensus 138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs~t--------------------- 193 (288)
T 1b0a_A 138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTHRFT--------------------- 193 (288)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEECSSC---------------------
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCe---EEEEeCCc---------------------
Confidence 34567788999999999999999999999995 799999999998865 89887521
Q ss_pred CCCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccC
Q psy14495 252 TARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 252 ~~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsN 294 (766)
.+|.+.++.+|++|+..+ ++.+++||++ +.-+|+=++-
T Consensus 194 --~~L~~~~~~ADIVI~Avg~p~lI~~~~vk---~GavVIDVgi 232 (288)
T 1b0a_A 194 --KNLRHHVENADLLIVAVGKPGFIPGDWIK---EGAIVIDVGI 232 (288)
T ss_dssp --SCHHHHHHHCSEEEECSCCTTCBCTTTSC---TTCEEEECCC
T ss_pred --hhHHHHhccCCEEEECCCCcCcCCHHHcC---CCcEEEEccC
Confidence 358899999999999886 8899988874 3445555443
No 50
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.38 E-value=0.0034 Score=66.11 Aligned_cols=168 Identities=16% Similarity=0.230 Sum_probs=98.5
Q ss_pred cCCC--ccccCCCCCCHHHHHHHHHHhCCCccc-----------cccccCCCCchHHHHH--H-HhhcCCCcEEecCCch
Q psy14495 109 AGID--VFDLEINETDPDKLCDIIFSLEPTFGG-----------INLEDIKAPECFYIEK--K-LRNHMKIPVFHDDQHG 172 (766)
Q Consensus 109 ~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~-----------i~~ED~~~~~af~il~--~-~~~~~~~~~fnDD~qG 172 (766)
-|+| ..++.+..++.+++++.++.. +|.+ +.+=|--++.|..+=. - +++.-.+-=+|-|
T Consensus 26 ~gl~~~Y~~~~v~~~~l~~~~~~~~~~--~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAVNTv~~~~g~l~G~NTD--- 100 (277)
T 3don_A 26 LNLENTYEAINVPVNQFQDIKKIISEK--SIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVKDGKWIGYNTD--- 100 (277)
T ss_dssp TTCCCEEEEEECCGGGGGGHHHHHHHT--TCSEEEECTTCTTTTGGGCSEECHHHHHHTCCCEEEEETTEEEEECCH---
T ss_pred cCcCcEEEEEEcCHHHHHHHHHHHhhC--CCCEEEECcCCHHHHHHHhhhCCHHHHHhCceeEEEecCCEEEEECCh---
Confidence 4777 456666667788888887753 4543 3444433343432200 0 0011112344444
Q ss_pred hHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC
Q psy14495 173 TAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT 252 (766)
Q Consensus 173 Ta~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~ 252 (766)
-.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|.+ ++++++++. ++.+.+.. .+. ...
T Consensus 101 -----~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~--~v~v~~R~~----~~a~~la~---~~~-~~~ 165 (277)
T 3don_A 101 -----GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRP--TLTVANRTM----SRFNNWSL---NIN-KIN 165 (277)
T ss_dssp -----HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCS--CCEEECSCG----GGGTTCCS---CCE-EEC
T ss_pred -----HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCC--EEEEEeCCH----HHHHHHHH---hcc-ccc
Confidence 345677888888899999999999999999999999999986 799998852 22111210 010 011
Q ss_pred CCCHHHHhccCcEEEecCCCCCCCH--HH--HHhhccCcEEEecc-CCC
Q psy14495 253 ARTLSDIIPNADIFLGLSVSGVLKK--EM--VLQMAKNPIILALA-NPL 296 (766)
Q Consensus 253 ~~~L~e~i~~~~vliG~S~~g~ft~--ev--v~~M~~~PiIfaLs-NPt 296 (766)
..++.++++.+|++|-+...|.... +. ...+.+..+|+=|+ ||.
T Consensus 166 ~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 166 LSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp HHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSS
T ss_pred HhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCC
Confidence 2346777888999997654332211 00 12244677888775 764
No 51
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.35 E-value=0.019 Score=62.64 Aligned_cols=95 Identities=15% Similarity=0.327 Sum_probs=67.2
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-----cCCCCHHHHhccCcE
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-----TTARTLSDIIPNADI 265 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-----~~~~~L~e~i~~~~v 265 (766)
.++..+++|+|+|..|..+++.+...|. +++++|++- +.+...+..+... .+..++.++++++|+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga---~V~~~d~~~-------~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~Dv 232 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA---QVTILDVNH-------KRLQYLDDVFGGRVITLTATEANIKKSVQHADL 232 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH-------HHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCH-------HHHHHHHHhcCceEEEecCCHHHHHHHHhCCCE
Confidence 3778999999999999999999999997 499888731 1122222222111 123467888889999
Q ss_pred EEecCC-C-----CCCCHHHHHhhccCcEEEeccCC
Q psy14495 266 FLGLSV-S-----GVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 266 liG~S~-~-----g~ft~evv~~M~~~PiIfaLsNP 295 (766)
+|.+.. + ..+++++++.|.+.-+|.-+|.+
T Consensus 233 Vi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 233 LIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp EEECCC-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred EEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 998765 3 24689999999987777777754
No 52
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.28 E-value=0.024 Score=58.62 Aligned_cols=102 Identities=19% Similarity=0.182 Sum_probs=67.9
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHH
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSD 258 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e 258 (766)
.|++.+|+..+.+++. |++|+|+|.+|-+++..|.+.|. +++++|++- ++ .......|... ..++.+
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~---~v~v~~r~~----~~---~~~l~~~~~~~--~~~~~~ 168 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGL---EVWVWNRTP----QR---ALALAEEFGLR--AVPLEK 168 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTC---CEEEECSSH----HH---HHHHHHHHTCE--ECCGGG
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCC---EEEEEECCH----HH---HHHHHHHhccc--hhhHhh
Confidence 4888889888889999 99999999999999999999996 599998741 11 12222222111 346888
Q ss_pred HhccCcEEEecCCCCCCC--HHH--HHhhccCcEEEeccC
Q psy14495 259 IIPNADIFLGLSVSGVLK--KEM--VLQMAKNPIILALAN 294 (766)
Q Consensus 259 ~i~~~~vliG~S~~g~ft--~ev--v~~M~~~PiIfaLsN 294 (766)
+ +.+|++|-+...+... ++. ...+.+..+|+-++.
T Consensus 169 ~-~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 169 A-REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVY 207 (263)
T ss_dssp G-GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCC
T ss_pred c-cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 8 8899988665434221 011 223345556666653
No 53
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.25 E-value=0.0046 Score=65.33 Aligned_cols=180 Identities=21% Similarity=0.252 Sum_probs=102.1
Q ss_pred ccchhhhH-----HHHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHh------hcC
Q psy14495 95 KPVMEGKA-----VLFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLR------NHM 161 (766)
Q Consensus 95 ~~i~~gK~-----~ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~------~~~ 161 (766)
-||.-+++ ..|.+ -|+| ..++.+..++..++++.++. ++|.+++.--==...+++++++.- ..-
T Consensus 13 ~Pi~hS~SP~~hn~~f~~-~gl~~~Y~~~~v~~~~l~~~v~~l~~--~~~~G~nVTiP~K~~v~~~ld~ls~~A~~iGAV 89 (282)
T 3fbt_A 13 EKLGHSHSSYIHKLIFEK-VGIKGIYNLFEVPKEKLKESVDTFKI--IKCGGLNVTIPYKVEVMKELYEISEKARKIGAV 89 (282)
T ss_dssp SSCCCCHHHHHHHHHHHH-HTCCEEEEEEECCGGGHHHHHHHHHH--TTCCEEEECTTCTTGGGGGCSEECHHHHHHTCC
T ss_pred CCccccchHHHHHHHHHH-cCCCcEEEEEECCHHHHHHHHHHHhc--CCCCEEEEcCCCHHHHHHHHHhcCHHHHHcCCc
Confidence 46655555 22333 3788 34555555566666666665 677654332211123333333321 111
Q ss_pred CCcEEecC-CchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC
Q psy14495 162 KIPVFHDD-QHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM 240 (766)
Q Consensus 162 ~~~~fnDD-~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l 240 (766)
+.-++.|+ ..|.-.= -.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|++ +|+++++. .
T Consensus 90 NTv~~~~g~l~G~NTD-~~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~--~v~v~nRt----~------ 156 (282)
T 3fbt_A 90 NTLKFSREGISGFNTD-YIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAK--DIYVVTRN----P------ 156 (282)
T ss_dssp CEEEECSSCEEEECCH-HHHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCS--EEEEEESC----H------
T ss_pred ceEEeeCCEEEeeCCc-HHHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCC--EEEEEeCC----H------
Confidence 21222222 1231111 278889999889999999999999999999999999999986 79998873 1
Q ss_pred cHHHHHhcccc---CCCCHHHHhccCcEEEecCCCCC--------CCHHHHHhhccCcEEEecc-CCC
Q psy14495 241 DSNKARFIKDT---TARTLSDIIPNADIFLGLSVSGV--------LKKEMVLQMAKNPIILALA-NPL 296 (766)
Q Consensus 241 ~~~k~~~a~~~---~~~~L~e~i~~~~vliG~S~~g~--------ft~evv~~M~~~PiIfaLs-NPt 296 (766)
.. -+.+|..- ...+|.+ + .+|++|-+...|. +..+.+ .+..+|+=+. ||.
T Consensus 157 ~k-a~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~pi~~~~l---~~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 157 EK-TSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESPVDKEVV---AKFSSAVDLIYNPV 218 (282)
T ss_dssp HH-HHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCSSCHHHH---TTCSEEEESCCSSS
T ss_pred HH-HHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCCCCHHHc---CCCCEEEEEeeCCC
Confidence 11 11233221 1123444 4 7899997653332 344443 3466777665 653
No 54
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.07 E-value=0.0088 Score=64.21 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=80.3
Q ss_pred HHHHHHHHHhH---------hCCcCCCceEEEECcch-hhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH
Q psy14495 177 VGSAILNGLKL---------VKKKMKDCKLVVSGAGA-AALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR 246 (766)
Q Consensus 177 ~lA~ll~al~~---------~~~~l~d~~iv~~GaG~-ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~ 246 (766)
|-.|.+-.++. .|.+++..++||+|+|. .|.-+|.+|...|.+ ++++|++..-...|.+.+..
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt---Vtv~nR~~~~l~~ra~~la~---- 223 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGAT---VYSVDVNNIQKFTRGESLKL---- 223 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE---EEEECSSEEEEEESCCCSSC----
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCE---EEEEeCchHHHHhHHHHHhh----
Confidence 33455666666 68899999999999995 699999999999854 99999986655555433431
Q ss_pred hccc------cCCCCHHHHhccCcEEEecCC-CCC-CCHHHHHhhccCcEEEeccCCC
Q psy14495 247 FIKD------TTARTLSDIIPNADIFLGLSV-SGV-LKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 247 ~a~~------~~~~~L~e~i~~~~vliG~S~-~g~-ft~evv~~M~~~PiIfaLsNPt 296 (766)
.++. ++..+|.+.++.+|++|+..+ ++. ++.||++ +.-+|+-++-|.
T Consensus 224 ~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk---~GavVIDVgi~r 278 (320)
T 1edz_A 224 NKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIK---EGAVCINFACTK 278 (320)
T ss_dssp CCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSC---TTEEEEECSSSC
T ss_pred hcccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcC---CCeEEEEcCCCc
Confidence 1121 111569999999999999876 776 9999874 356777787764
No 55
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.01 E-value=0.014 Score=63.40 Aligned_cols=94 Identities=20% Similarity=0.371 Sum_probs=69.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEE
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIF 266 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vl 266 (766)
++..+++|+|||.+|.+++..+...|. +++++|+.- +.+...+..++... +..++.+.++++|++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga---~V~v~dr~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV 234 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA---QVQIFDINV-------ERLSYLETLFGSRVELLYSNSAEIETAVAEADLL 234 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH-------HHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH-------HHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEE
Confidence 667899999999999999999999997 499998731 12333333343321 223577888889999
Q ss_pred EecCC-CC-----CCCHHHHHhhccCcEEEeccCC
Q psy14495 267 LGLSV-SG-----VLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 267 iG~S~-~g-----~ft~evv~~M~~~PiIfaLsNP 295 (766)
|.+.. ++ .++++.++.|.+.-+|+-++.+
T Consensus 235 I~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp EECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred EECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 98875 33 2589999999988888888864
No 56
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.89 E-value=0.0094 Score=62.51 Aligned_cols=179 Identities=14% Similarity=0.173 Sum_probs=104.2
Q ss_pred ccchhhhHH-----HHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCcccc-----------ccccCCCCchHHHHH-
Q psy14495 95 KPVMEGKAV-----LFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGGI-----------NLEDIKAPECFYIEK- 155 (766)
Q Consensus 95 ~~i~~gK~~-----ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i-----------~~ED~~~~~af~il~- 155 (766)
-||.-+++= .|.. -|+| .+|+.+...+.++|++.++.. ++|.++ .+=|--++.|..+=.
T Consensus 14 ~PI~HS~SP~ihn~~f~~-~gl~~~Y~~~~v~~~~l~~~~~~l~~~-~~~~G~nVTiP~K~~~~~~lD~ls~~A~~iGAV 91 (269)
T 3tum_A 14 SPIAQVKSPQNFNTWFNH-NNCNLAMLPIDLHEAALDSFADTLRGW-QNLRGCVVTVPYKQALANRVDGLSERAAALGSI 91 (269)
T ss_dssp SSCTTCCHHHHHHHHHHH-TTCSEEEEEEEBCGGGHHHHHHHHHHB-TTEEEEEECTTCHHHHHTTSSEECHHHHHHTCC
T ss_pred CCcchhhhHHHHHHHHHH-cCCCeEEEEeecCHhhHHHHHHHHHhc-cCCCeeEeccccHHHHHHHhccCCHHHHHcCce
Confidence 566555553 2333 4677 467777777899999998864 566443 333333333321100
Q ss_pred --HHhh-cCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 156 --KLRN-HMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 156 --~~~~-~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
-+++ .-.+-=+|-|- .|++.+|+..|.+++..|++++|||-|+-+++-.|.+.|+. +|+++++.
T Consensus 92 NTi~~~~dG~l~G~NTD~--------~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~--~i~i~nRt--- 158 (269)
T 3tum_A 92 NVIRRERDGRLLGDNVDG--------AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIA--SITLCDPS--- 158 (269)
T ss_dssp SEEEECTTSCEEEECCHH--------HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSC---
T ss_pred eEEEECCCCEEEEEEcCh--------HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCC--eEEEeCCC---
Confidence 0011 11233455553 35677888889999999999999999999999999999987 79999872
Q ss_pred cCCCCCCCcHHHHHhccccC---CCCHHHHhccCcEEEecCCCCC-------CCHHHHHhhccCcEEEec
Q psy14495 233 YKGRSELMDSNKARFIKDTT---ARTLSDIIPNADIFLGLSVSGV-------LKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 233 ~~~r~~~l~~~k~~~a~~~~---~~~L~e~i~~~~vliG~S~~g~-------ft~evv~~M~~~PiIfaL 292 (766)
.+|. ......+..... .....+.++..|++|=++.-|. +.++.+....+..++|=+
T Consensus 159 -~~ra---~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 159 -TARM---GAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp -HHHH---HHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred -HHHH---HHHHHHHhccCCcceehhhhhhhhcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 2221 111111211111 1122334456789887654332 445555555555555544
No 57
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.88 E-value=0.031 Score=62.17 Aligned_cols=191 Identities=16% Similarity=0.215 Sum_probs=115.2
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCcc---ccccccCCCCchH---HHHHHHhhcCC
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETD---PDKLCD-IIFSLEPTFG---GINLEDIKAPECF---YIEKKLRNHMK 162 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g---~i~~ED~~~~~af---~il~~~~~~~~ 162 (766)
++++-|| ++.|+. .+++.-...+ .+.|.+ +++.+.+-.| -|-=+|++.. .. -+.+.|+...+
T Consensus 87 a~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~ 165 (421)
T 1v9l_A 87 AILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKG 165 (421)
T ss_dssp HHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhC
Confidence 5666665 456665 2222111122 333444 4666666554 2666777763 22 23456643111
Q ss_pred C---cEEe----------cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE-EEcC
Q psy14495 163 I---PVFH----------DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF-VTDL 228 (766)
Q Consensus 163 ~---~~fn----------DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~-~~D~ 228 (766)
. .++- +--.-||-=+.-++-.+++..|.+++..||+|.|.|..|...+++|.+.|.+ ++ +.|+
T Consensus 166 ~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~Gak---VVavsD~ 242 (421)
T 1v9l_A 166 YNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAK---VIAVSDI 242 (421)
T ss_dssp SCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECS
T ss_pred CCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCE---EEEEECC
Confidence 1 1121 1112355555566777888899999999999999999999999999999976 55 9999
Q ss_pred CccccCCCCCCCcHHHHHhccc--c------------CCC-CHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEec
Q psy14495 229 AGVLYKGRSELMDSNKARFIKD--T------------TAR-TLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 229 ~Glv~~~r~~~l~~~k~~~a~~--~------------~~~-~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaL 292 (766)
+|.++...+=++...++ +... . ..- +-.|... .+|||+-+..++.+|++-.+.+ +-.+|.--
T Consensus 243 ~G~i~dp~GlD~~~l~~-~k~~~g~~~v~~y~~~~~~~~~~~~~~~~~~~~Dil~P~A~~~~I~~~~a~~l-~ak~V~Eg 320 (421)
T 1v9l_A 243 NGVAYRKEGLNVELIQK-NKGLTGPALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLV-KARLVVEG 320 (421)
T ss_dssp SCEEECTTCCCTHHHHH-TTTSCHHHHHHHHHHTSCCCCCSSTTGGGGCCCSEEEECSCSSCBCTTTTTTC-CCSEEECC
T ss_pred CcEEECCCCCCHHHHHH-HHHhhCCccccccccccCceEeCCchhhhcCCccEEEecCcCCccchhhHHHc-CceEEEec
Confidence 99998754212222211 1111 1 111 1234444 3699999988888998887777 56777777
Q ss_pred cC-CC
Q psy14495 293 AN-PL 296 (766)
Q Consensus 293 sN-Pt 296 (766)
+| |+
T Consensus 321 AN~p~ 325 (421)
T 1v9l_A 321 ANGPT 325 (421)
T ss_dssp SSSCB
T ss_pred CCCcC
Confidence 77 53
No 58
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.85 E-value=0.067 Score=58.74 Aligned_cols=119 Identities=14% Similarity=0.129 Sum_probs=92.9
Q ss_pred CCCcEEecCC---chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCC
Q psy14495 161 MKIPVFHDDQ---HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRS 237 (766)
Q Consensus 161 ~~~~~fnDD~---qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~ 237 (766)
.+|++.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|-.+|+.+...|+. ++.+|+.. .
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~---V~~~d~~~----~-- 153 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIR---TLLCDPPR----A-- 153 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCE---EEEECHHH----H--
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCE---EEEECCCh----H--
Confidence 3788888643 3455568999999999999999999999999999999999999999986 88888621 0
Q ss_pred CCCcHHHHHhccccCCCCHHHHhccCcEEEec-C--------CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 238 ELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S--------VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 238 ~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S--------~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
+. .......+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=.|.-.
T Consensus 154 ------~~--~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 154 ------AR--GDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp ------HT--TCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred ------Hh--ccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 00 0112345799999999987633 1 34589999999999999999888643
No 59
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.80 E-value=0.064 Score=58.37 Aligned_cols=141 Identities=17% Similarity=0.203 Sum_probs=95.4
Q ss_pred cccccCCCCc--hHHHHHHHhhcCCCcEE----ecCCchhHHHHHHHHHHHHhHhCC-cCCCceEEEECcchhhHHHHHH
Q psy14495 140 INLEDIKAPE--CFYIEKKLRNHMKIPVF----HDDQHGTAIIVGSAILNGLKLVKK-KMKDCKLVVSGAGAAALACLDL 212 (766)
Q Consensus 140 i~~ED~~~~~--af~il~~~~~~~~~~~f----nDD~qGTa~v~lA~ll~al~~~~~-~l~d~~iv~~GaG~ag~gia~~ 212 (766)
|-=+|++..- --.+.++|+.-.+-|.- .|--.-||-=+.-++-.+++..|. +|+..+|+|.|.|..|..+|+.
T Consensus 114 ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~ 193 (355)
T 1c1d_A 114 WTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASL 193 (355)
T ss_dssp EEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHH
Confidence 5566776432 12244555532233321 122223665666677778888898 8999999999999999999999
Q ss_pred HHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc--CCCCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEE
Q psy14495 213 IIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT--TARTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPII 289 (766)
Q Consensus 213 l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiI 289 (766)
+.+.|.+ +++.|++ +.+..|++.. ..-++.|..+ .+|+|+=+...+.++++-++.|. -.+|
T Consensus 194 l~~~Gak---VvvsD~~------------~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~lk-~~iV 257 (355)
T 1c1d_A 194 AAEAGAQ---LLVADTD------------TERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTLD-CSVV 257 (355)
T ss_dssp HHHTTCE---EEEECSC------------HHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHCC-CSEE
T ss_pred HHHCCCE---EEEEeCC------------ccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhhCC-CCEE
Confidence 9999975 8888874 1112333321 1224566666 67999987778999999999996 6788
Q ss_pred EeccC-CC
Q psy14495 290 LALAN-PL 296 (766)
Q Consensus 290 faLsN-Pt 296 (766)
.--+| |+
T Consensus 258 ie~AN~p~ 265 (355)
T 1c1d_A 258 AGAANNVI 265 (355)
T ss_dssp CCSCTTCB
T ss_pred EECCCCCC
Confidence 87777 53
No 60
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.75 E-value=0.013 Score=61.75 Aligned_cols=165 Identities=18% Similarity=0.176 Sum_probs=97.6
Q ss_pred ccchhhhH-----HHHhhhcCCC--ccccC-----CCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHh----
Q psy14495 95 KPVMEGKA-----VLFKKFAGID--VFDLE-----INETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLR---- 158 (766)
Q Consensus 95 ~~i~~gK~-----~ly~~~~gi~--~l~v~-----~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~---- 158 (766)
-||.-+++ ..|.++ |+| ..++. ++.++.+++++.++. ++|.++|.--=-...+++++++..
T Consensus 12 ~Pi~hS~SP~~hn~~f~~~-gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~lD~l~~~A~ 88 (283)
T 3jyo_A 12 QGLDLSRTPAMHEAEGLAQ-GRATVYRRIDTLGSRASGQDLKTLLDAALY--LGFNGLNITHPYKQAVLPLLDEVSEQAT 88 (283)
T ss_dssp SSCTTCSHHHHHHHHHHHT-TCCEEEEEEETTSTTTTTCCHHHHHHHHHH--TTCCEEEECTTCTTTTGGGSSEECHHHH
T ss_pred CCccccccHHHHHHHHHHc-CCCeEEEEEEccccCCCHHHHHHHHHHHhh--CCCCEEEECcccHHHHHHHhhhCCHHHH
Confidence 45544444 234443 788 33443 456788888888775 566553322211122333322211
Q ss_pred --hcCCCcEEec-CC--chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcccc
Q psy14495 159 --NHMKIPVFHD-DQ--HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLY 233 (766)
Q Consensus 159 --~~~~~~~fnD-D~--qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~ 233 (766)
-.-+ .+.++ |- +|.=.= -.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|+. +++++|++
T Consensus 89 ~iGAVN-Tv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~--~v~i~~R~---- 160 (283)
T 3jyo_A 89 QLGAVN-TVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQ--KLQVADLD---- 160 (283)
T ss_dssp HHTCCC-EEEECTTSCEEEECHH-HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSS----
T ss_pred HhCcce-EEEECCCCeEEEecCC-HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCC--EEEEEECC----
Confidence 1112 12333 32 332111 357888888888899999999999999999999999999987 79998874
Q ss_pred CCCCCCCcHHHHHhcc--------ccCCCCHHHHhccCcEEEecCCCC
Q psy14495 234 KGRSELMDSNKARFIK--------DTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 234 ~~r~~~l~~~k~~~a~--------~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.++ .......+.. ..+..+|.+.++.+|++|-++..|
T Consensus 161 ~~~---a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~G 205 (283)
T 3jyo_A 161 TSR---AQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMG 205 (283)
T ss_dssp HHH---HHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTT
T ss_pred HHH---HHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCC
Confidence 111 1122222211 112347889999999999776544
No 61
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.73 E-value=0.016 Score=60.96 Aligned_cols=158 Identities=16% Similarity=0.173 Sum_probs=101.4
Q ss_pred cCCCccccCCCC-CCHHHHHHHHHHhC--CCccc--cccccCCCCchHHHHHHHhhcCCCcEEecC--------CchhHH
Q psy14495 109 AGIDVFDLEINE-TDPDKLCDIIFSLE--PTFGG--INLEDIKAPECFYIEKKLRNHMKIPVFHDD--------QHGTAI 175 (766)
Q Consensus 109 ~gi~~l~v~~~~-~~~~~~v~~v~~~~--p~~g~--i~~ED~~~~~af~il~~~~~~~~~~~fnDD--------~qGTa~ 175 (766)
-||++..+.+.. ...+|+++.+..+- |+.-+ +|+==.+.-+..++++.-..+-++=.||.- ..+-.-
T Consensus 60 ~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~P 139 (281)
T 2c2x_A 60 VGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLP 139 (281)
T ss_dssp HTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCC
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCCCCCCCC
Confidence 567755444443 24677777766554 44422 343222222333333333211122223311 123344
Q ss_pred HHHHHHHHHHhHhCCcCCCceEEEECcch-hhHHHHHHHHHc--CCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC
Q psy14495 176 IVGSAILNGLKLVKKKMKDCKLVVSGAGA-AALACLDLIIDL--GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT 252 (766)
Q Consensus 176 v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~gia~~l~~~--g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~ 252 (766)
+|-.|++-.++..+.+++..++|++|+|. .|.-+|.+|... |. ++++++|+=
T Consensus 140 cTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a---tVtv~h~~t---------------------- 194 (281)
T 2c2x_A 140 CTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA---TVTLCHTGT---------------------- 194 (281)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC---EEEEECTTC----------------------
T ss_pred ChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC---EEEEEECch----------------------
Confidence 57778899999999999999999999996 599999999888 53 488886520
Q ss_pred CCCHHHHhccCcEEEecCC-CCCCCHHHHHhhccCcEEEeccCC
Q psy14495 253 ARTLSDIIPNADIFLGLSV-SGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 253 ~~~L~e~i~~~~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
.+|.+.++.+|++|+..+ ++.+++||++. .-+|+=++-|
T Consensus 195 -~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~---GavVIDVgi~ 234 (281)
T 2c2x_A 195 -RDLPALTRQADIVVAAVGVAHLLTADMVRP---GAAVIDVGVS 234 (281)
T ss_dssp -SCHHHHHTTCSEEEECSCCTTCBCGGGSCT---TCEEEECCEE
T ss_pred -hHHHHHHhhCCEEEECCCCCcccCHHHcCC---CcEEEEccCC
Confidence 358999999999999886 88999999753 5666666654
No 62
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.72 E-value=0.12 Score=57.26 Aligned_cols=173 Identities=16% Similarity=0.188 Sum_probs=115.0
Q ss_pred HHHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHH
Q psy14495 102 AVLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVG 178 (766)
Q Consensus 102 ~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~l 178 (766)
-.|...+.+.|++=+...+.-..++++.. |+.-.|+.-=.+..| .. ++..++ .+|+|||--- +.+|=-++
T Consensus 50 ~~l~~~~~~~d~l~v~~~~~i~~~~l~~~----p~Lk~I~~~~~G~d~-ID-l~~a~~-~GI~V~n~p~~n~~aVAE~~l 122 (416)
T 3k5p_A 50 ADLIKAISSAHIIGIRSRTQLTEEIFAAA----NRLIAVGCFSVGTNQ-VE-LKAARK-RGIPVFNAPFSNTRSVAELVI 122 (416)
T ss_dssp HHHHHHHTTCSEEEECSSCCBCHHHHHHC----TTCCEEEECSSCCTT-BC-HHHHHH-TTCCEECCSSTTHHHHHHHHH
T ss_pred HHHHHHccCCEEEEEcCCCCCCHHHHHhC----CCcEEEEECccccCc-cC-HHHHHh-cCcEEEeCCCcccHHHHHHHH
Confidence 34556677777543222223345555543 444334333333332 12 234444 3899999743 44666788
Q ss_pred HHHHHHHhH------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC
Q psy14495 179 SAILNGLKL------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM 240 (766)
Q Consensus 179 A~ll~al~~------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l 240 (766)
+.+|+..|. .+..+.+.++.|+|.|..|-.+|+.+...|+. ++.+|+..-. ..
T Consensus 123 ~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~---V~~yd~~~~~------~~ 193 (416)
T 3k5p_A 123 GEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESLGMT---VRYYDTSDKL------QY 193 (416)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECTTCCC------CB
T ss_pred HHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEECCcchh------cc
Confidence 888888864 25678999999999999999999999999986 8889974210 00
Q ss_pred cHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCCCC
Q psy14495 241 DSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANPLP 297 (766)
Q Consensus 241 ~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNPt~ 297 (766)
. ......+|.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|.-..
T Consensus 194 ~-------~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~v 248 (416)
T 3k5p_A 194 G-------NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSD 248 (416)
T ss_dssp T-------TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTS
T ss_pred c-------CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChh
Confidence 0 011245799999999987633 1 247899999999999999999987554
No 63
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.67 E-value=0.099 Score=56.08 Aligned_cols=173 Identities=13% Similarity=0.155 Sum_probs=107.7
Q ss_pred HHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHH
Q psy14495 103 VLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGS 179 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA 179 (766)
.+...+.+.+.+=+.....-..++++.. -|+.-.|+.-..+..|- . ++..++ .+|++.|--- +.+|=-+++
T Consensus 46 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~---~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gi~v~n~~~~~~~~vAe~~~~ 119 (330)
T 2gcg_A 46 ELERGVAGAHGLLCLLSDHVDKRILDAA---GANLKVISTMSVGIDHL-A-LDEIKK-RGIRVGYTPDVLTDTTAELAVS 119 (330)
T ss_dssp HHHHHHTTCSEEEECTTSCBCHHHHHHH---CTTCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCCSTTHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCCCHHHHHhc---CCCceEEEECCcccccc-c-HHHHHh-CCceEEeCCCCChHHHHHHHHH
Confidence 3444555666432211112234444432 25555566666665552 1 233444 3799999643 334445788
Q ss_pred HHHHHHhHh---------------------CCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCC
Q psy14495 180 AILNGLKLV---------------------KKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSE 238 (766)
Q Consensus 180 ~ll~al~~~---------------------~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~ 238 (766)
.+|+..|.. |..+.+.+|.|+|.|..|..+|+.+...|+. ++.+|+.. +
T Consensus 120 ~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~---V~~~d~~~-------~ 189 (330)
T 2gcg_A 120 LLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQ---RFLYTGRQ-------P 189 (330)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCC---EEEEESSS-------C
T ss_pred HHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCE---EEEECCCC-------c
Confidence 999887732 3568899999999999999999999999975 89888631 1
Q ss_pred CCcHHHHHhccccCCCCHHHHhccCcEEEec-CC----CCCCCHHHHHhhccCcEEEeccC
Q psy14495 239 LMDSNKARFIKDTTARTLSDIIPNADIFLGL-SV----SGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 239 ~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S~----~g~ft~evv~~M~~~PiIfaLsN 294 (766)
.....+ .+ .....++.|+++.+|+++=. .. .+.++++.++.|.+..++.-.|.
T Consensus 190 ~~~~~~-~~--g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 190 RPEEAA-EF--QAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp CHHHHH-TT--TCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred chhHHH-hc--CceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 111111 11 11112799999999987633 21 45788889999988888876665
No 64
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.66 E-value=0.13 Score=54.90 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=97.1
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhHh---------------------C
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKLV---------------------K 189 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~~---------------------~ 189 (766)
.|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++.+|+..|.. +
T Consensus 63 ~~~Lk~i~~~~~G~d~i-d-~~~~~~-~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 139 (311)
T 2cuk_A 63 AKGLKVIACYSVGVDHV-D-LEAARE-RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLG 139 (311)
T ss_dssp STTCCEEECSSSCCTTB-C-HHHHHT-TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCB
T ss_pred CCCCeEEEECCcCcccc-C-HHHHHh-CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccC
Confidence 35544444433333331 1 233344 3799998543 234445788888887632 4
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~ 269 (766)
..+.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+.. .. .. + ...+|.|+++.+|+++=.
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~---V~~~d~~~----~~---~~------~---~~~~l~ell~~aDvV~l~ 200 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMR---VVYHARTP----KP---LP------Y---PFLSLEELLKEADVVSLH 200 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC----CS---SS------S---CBCCHHHHHHHCSEEEEC
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCE---EEEECCCC----cc---cc------c---ccCCHHHHHhhCCEEEEe
Confidence 568899999999999999999999999974 88888742 11 11 1 235799999999987644
Q ss_pred C-----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 270 S-----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 270 S-----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
- +.+.++++.++.|.+..++.-.|.-.
T Consensus 201 ~p~~~~t~~li~~~~l~~mk~ga~lin~srg~ 232 (311)
T 2cuk_A 201 TPLTPETHRLLNRERLFAMKRGAILLNTARGA 232 (311)
T ss_dssp CCCCTTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred CCCChHHHhhcCHHHHhhCCCCcEEEECCCCC
Confidence 1 24688889999999999999888743
No 65
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.63 E-value=0.058 Score=61.23 Aligned_cols=106 Identities=17% Similarity=0.199 Sum_probs=81.0
Q ss_pred hHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccC
Q psy14495 186 KLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNA 263 (766)
Q Consensus 186 ~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~ 263 (766)
|..+..+...+|+|+|+|..|.++|+.+...|. +++++|++ +.+...|+. .+..++.|+++++
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga---~Viv~d~~------------~~~~~~A~~~Ga~~~~l~e~l~~a 330 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA---RVSVTEID------------PINALQAMMEGFDVVTVEEAIGDA 330 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC------------HHHHHHHHHTTCEECCHHHHGGGC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC---EEEEEeCC------------HHHHHHHHHcCCEEecHHHHHhCC
Confidence 345667899999999999999999999999996 48888873 222222221 1134688999999
Q ss_pred cEEEecCC-CCCCCHHHHHhhccCcEEEeccCCCCccCHhhHhc
Q psy14495 264 DIFLGLSV-SGVLKKEMVLQMAKNPIILALANPLPEILPEDIKS 306 (766)
Q Consensus 264 ~vliG~S~-~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~~ 306 (766)
|++|=+.. .+.++.+.++.|.+.-+|.-.+....|+..+..+.
T Consensus 331 DvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~ 374 (494)
T 3ce6_A 331 DIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER 374 (494)
T ss_dssp SEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHH
Confidence 99997765 67899999999999999988888766676655433
No 66
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=95.61 E-value=0.094 Score=55.77 Aligned_cols=145 Identities=12% Similarity=0.159 Sum_probs=98.0
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhH------------------hCCcC
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKL------------------VKKKM 192 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~------------------~~~~l 192 (766)
.|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++.+|+..|. .+..+
T Consensus 64 ~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l 140 (307)
T 1wwk_A 64 APKLKVIARAGVGLDNI-D-VEAAKE-KGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIEL 140 (307)
T ss_dssp CTTCCEEEESSSCCTTB-C-HHHHHH-HTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCC
T ss_pred CCCCeEEEECCcccccc-C-HHHHHh-CCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCccc
Confidence 45555565555555542 2 233333 2688888543 33444578888888773 34578
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C-
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S- 270 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S- 270 (766)
.+.+|.|+|.|..|-.+|+.+...|++ ++.+|+.. +. ...+ .+ .....++.|+++.+|+++=. .
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~---V~~~d~~~-------~~-~~~~-~~--g~~~~~l~ell~~aDvV~l~~p~ 206 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMN---ILLYDPYP-------NE-ERAK-EV--NGKFVDLETLLKESDVVTIHVPL 206 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC-------CH-HHHH-HT--TCEECCHHHHHHHCSEEEECCCC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCE---EEEECCCC-------Ch-hhHh-hc--CccccCHHHHHhhCCEEEEecCC
Confidence 999999999999999999999999975 88888731 11 1111 11 11123799999999987633 2
Q ss_pred ---CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 271 ---VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 271 ---~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
+.+.++++.++.|.+..++.-.|.-
T Consensus 207 ~~~t~~li~~~~l~~mk~ga~lin~arg 234 (307)
T 1wwk_A 207 VESTYHLINEERLKLMKKTAILINTSRG 234 (307)
T ss_dssp STTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred ChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence 2467889999999998888888763
No 67
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.55 E-value=0.063 Score=59.95 Aligned_cols=193 Identities=13% Similarity=0.151 Sum_probs=119.9
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCccc---cccccCCCC--chHHHHHHHhhcCCC
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETD---PDKLCD-IIFSLEPTFGG---INLEDIKAP--ECFYIEKKLRNHMKI 163 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g~---i~~ED~~~~--~af~il~~~~~~~~~ 163 (766)
++++-|| ++.|+. .+++.-.... .+.|.+ +++.+.+-.|. |-=+|++.. .---+.+.|+...+.
T Consensus 112 a~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~ 191 (440)
T 3aog_A 112 AGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGR 191 (440)
T ss_dssp HHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCC
Confidence 5566665 456666 2333211222 344454 46667766542 566777753 122355666431111
Q ss_pred ---cEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE-EEcCC
Q psy14495 164 ---PVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF-VTDLA 229 (766)
Q Consensus 164 ---~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~-~~D~~ 229 (766)
.++ ++.-.-||-=+.-++-.+++..|.+++..||+|.|.|..|...|++|.+.|.+ ++ +.|++
T Consensus 192 ~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~Gak---vVavsD~~ 268 (440)
T 3aog_A 192 TVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGAR---VVAVQDHT 268 (440)
T ss_dssp CCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEECSS
T ss_pred CCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCE---EEEEEcCC
Confidence 122 23334566666777788888899999999999999999999999999999976 55 99999
Q ss_pred ccccCCCCCC---CcHHHHHhcccc-----CCCCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccC-CC
Q psy14495 230 GVLYKGRSEL---MDSNKARFIKDT-----TARTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALAN-PL 296 (766)
Q Consensus 230 Glv~~~r~~~---l~~~k~~~a~~~-----~~~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsN-Pt 296 (766)
|-++...+=+ +..+|..+-.-. ..-+-.+... .+|||+-+..++.+|++-.+.+ +-.+|.--+| |+
T Consensus 269 G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l-~ak~VvEgAN~p~ 344 (440)
T 3aog_A 269 GTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRI-RARIVAEGANGPT 344 (440)
T ss_dssp CEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGC-CCSEEECCSSSCB
T ss_pred cEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCCCcEEEecCCcCccchhhHHHc-CCcEEEecCcccc
Confidence 9999865312 222232211100 0112344444 3699999888888888888877 5566666666 54
No 68
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.54 E-value=0.14 Score=55.61 Aligned_cols=174 Identities=14% Similarity=0.081 Sum_probs=112.5
Q ss_pred HHHhhhcCCCccccCCC--CCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHH
Q psy14495 103 VLFKKFAGIDVFDLEIN--ETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIV 177 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~--~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~ 177 (766)
.+...+.+.|++=+.-. ..-..++++. .|+.-.|+.--.+.+|- . ++..++ .+|++.|--- +.+|=-+
T Consensus 55 ~~~~~~~~ad~li~~~~~~~~~~~~~l~~----~p~Lk~i~~~g~G~d~i-d-~~~a~~-~gI~V~n~~g~~~~~vAE~~ 127 (351)
T 3jtm_A 55 ELEKHIPDLHVLISTPFHPAYVTAERIKK----AKNLKLLLTAGIGSDHI-D-LQAAAA-AGLTVAEVTGSNVVSVAEDE 127 (351)
T ss_dssp HHHHHTTTCSEEEECTTSCCCBCHHHHHH----CSSCCEEEESSSCCTTB-C-HHHHHH-TTCEEEECTTTTHHHHHHHH
T ss_pred HHHHHhCCCEEEEEccCCCCCCCHHHHhh----CCCCeEEEEeCeeeccc-C-HHHHHh-cCeeEEECCCcCchHHHHHH
Confidence 45666777774322110 1112444443 46665566555554442 2 223333 3799998533 2344457
Q ss_pred HHHHHHHHhH--------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCC
Q psy14495 178 GSAILNGLKL--------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRS 237 (766)
Q Consensus 178 lA~ll~al~~--------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~ 237 (766)
++-+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+...
T Consensus 128 ~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~---V~~~dr~~~------ 198 (351)
T 3jtm_A 128 LMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN---LLYHDRLQM------ 198 (351)
T ss_dssp HHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCE---EEEECSSCC------
T ss_pred HHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCE---EEEeCCCcc------
Confidence 8888888763 25679999999999999999999999999986 888887421
Q ss_pred CCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 238 ELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 238 ~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
.....+..-+ ....+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=.|.-
T Consensus 199 -~~~~~~~~g~--~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG 258 (351)
T 3jtm_A 199 -APELEKETGA--KFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARG 258 (351)
T ss_dssp -CHHHHHHHCC--EECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred -CHHHHHhCCC--eEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCc
Confidence 1111111111 1135799999999987632 1 2468999999999999999988874
No 69
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=95.48 E-value=0.1 Score=57.36 Aligned_cols=80 Identities=25% Similarity=0.403 Sum_probs=60.3
Q ss_pred CceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCC-
Q psy14495 194 DCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSV- 271 (766)
Q Consensus 194 d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~- 271 (766)
-.||+|+|+ |.+|.+.++.+..+|....++..+|.+= ..++.. | +.++.+|++||+--
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~---~~~g~~-------~----------~~i~~aDivIn~vli 273 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE---TSRGGP-------F----------DEIPQADIFINCIYL 273 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH---HTTCSC-------C----------THHHHSSEEEECCCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc---cccCCc-------h----------hhHhhCCEEEECcCc
Confidence 469999999 9999999999999998544688888741 111111 1 34667899998852
Q ss_pred ----CCCCCHHHHHhh-ccCcEEEecc
Q psy14495 272 ----SGVLKKEMVLQM-AKNPIILALA 293 (766)
Q Consensus 272 ----~g~ft~evv~~M-~~~PiIfaLs 293 (766)
|-++|+|+++.| .+--+|.=+|
T Consensus 274 g~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 274 SKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred CCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 668999999999 6777777666
No 70
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.44 E-value=0.11 Score=56.26 Aligned_cols=121 Identities=17% Similarity=0.278 Sum_probs=89.4
Q ss_pred CCCcEEecCC---chhHHHHHHHHHHHHhH---------------------hCCcCCCceEEEECcchhhHHHHHHHHHc
Q psy14495 161 MKIPVFHDDQ---HGTAIIVGSAILNGLKL---------------------VKKKMKDCKLVVSGAGAAALACLDLIIDL 216 (766)
Q Consensus 161 ~~~~~fnDD~---qGTa~v~lA~ll~al~~---------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~ 216 (766)
.+|++.|--- +.+|=-+++-+|+..|. .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 3799999643 33555688888887764 25678999999999999999999999999
Q ss_pred CCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEe
Q psy14495 217 GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILA 291 (766)
Q Consensus 217 g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfa 291 (766)
|+. ++.+|+... +..... ......+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=
T Consensus 196 G~~---V~~~dr~~~---------~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN 261 (345)
T 4g2n_A 196 GLA---IHYHNRTRL---------SHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVIN 261 (345)
T ss_dssp TCE---EEEECSSCC---------CHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEE
T ss_pred CCE---EEEECCCCc---------chhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEE
Confidence 975 888887431 111111 111125899999999987633 2 247899999999999999998
Q ss_pred ccCC
Q psy14495 292 LANP 295 (766)
Q Consensus 292 LsNP 295 (766)
.|.-
T Consensus 262 ~aRG 265 (345)
T 4g2n_A 262 ISRG 265 (345)
T ss_dssp CSCG
T ss_pred CCCC
Confidence 8863
No 71
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.42 E-value=0.047 Score=56.92 Aligned_cols=165 Identities=17% Similarity=0.262 Sum_probs=97.2
Q ss_pred CCCc--cccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHH------hhcCCCcEEecCC--ch--hHHHH
Q psy14495 110 GIDV--FDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKL------RNHMKIPVFHDDQ--HG--TAIIV 177 (766)
Q Consensus 110 gi~~--l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~------~~~~~~~~fnDD~--qG--Ta~v~ 177 (766)
|++. .++.+..++..++++.++. +.|.+++.--=-...++.++++. -...+ ++.++|- .| | .
T Consensus 39 g~~~~y~~~~~~~~~l~~~i~~l~~--~~~~G~nvtiP~k~~i~~~ld~l~~~A~~~gavn-ti~~~~g~~~g~nT---d 112 (275)
T 2hk9_A 39 GLNAVYLAFEINPEELKKAFEGFKA--LKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVN-TVKFENGKAYGYNT---D 112 (275)
T ss_dssp TCSEEEEEEECCGGGHHHHHHHHHH--HTCCEEEECTTSTTTTGGGCSEECHHHHHHTCCC-EEEEETTEEEEECC---H
T ss_pred CCCcEEEEEECCHHHHHHHHHHHHh--CCCCEEEECccCHHHHHHHHHHhhHHHHHhCCcc-eEEeeCCEEEeecC---C
Confidence 6783 3444444455566655553 46656554432333444444322 12222 2333221 22 3 2
Q ss_pred HHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc---CCC
Q psy14495 178 GSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT---TAR 254 (766)
Q Consensus 178 lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~ 254 (766)
..|++.+|+..+.+++..|++|+|+|.+|.+++..|.+.|. +++++|++- +.-+.+++.. -..
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~---~V~v~~r~~-----------~~~~~l~~~~g~~~~~ 178 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGA---KVFLWNRTK-----------EKAIKLAQKFPLEVVN 178 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSH-----------HHHHHHTTTSCEEECS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHcCC---EEEEEECCH-----------HHHHHHHHHcCCeeeh
Confidence 34888888888888999999999999999999999999996 599888731 1112233211 112
Q ss_pred CHHHHhccCcEEEecCCCCCCC--HHHH--HhhccCcEEEeccC
Q psy14495 255 TLSDIIPNADIFLGLSVSGVLK--KEMV--LQMAKNPIILALAN 294 (766)
Q Consensus 255 ~L~e~i~~~~vliG~S~~g~ft--~evv--~~M~~~PiIfaLsN 294 (766)
++.++++.+|++|-+...+... ++.+ ..+.+..+|+-++.
T Consensus 179 ~~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 179 SPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp CGGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred hHHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 7888899999998665444321 1122 23445667777776
No 72
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.30 E-value=0.19 Score=54.05 Aligned_cols=144 Identities=13% Similarity=0.133 Sum_probs=93.4
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEecCCc---hhHHHHHHHHHHHHhHh----------------------
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQH---GTAIIVGSAILNGLKLV---------------------- 188 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~q---GTa~v~lA~ll~al~~~---------------------- 188 (766)
.|+.-.|+.--.+..|- . ++..++ .+|++.|---- .+|=-+++.+|+..|..
T Consensus 65 ~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~ 141 (334)
T 2dbq_A 65 APKLRIVANYAVGYDNI-D-IEEATK-RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPK 141 (334)
T ss_dssp CTTCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTT
T ss_pred CCCceEEEECCcccccc-c-HHHHHh-CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccc
Confidence 35544454444444331 1 223333 36888885433 33444788888876621
Q ss_pred ---CCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcE
Q psy14495 189 ---KKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADI 265 (766)
Q Consensus 189 ---~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~v 265 (766)
+..+...+|.|+|.|..|..+|..+...|.. ++.+|+.. +. ...+ .+- ....++.++++.+|+
T Consensus 142 ~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~---V~~~d~~~-------~~-~~~~-~~g--~~~~~l~~~l~~aDv 207 (334)
T 2dbq_A 142 WFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR---ILYYSRTR-------KE-EVER-ELN--AEFKPLEDLLRESDF 207 (334)
T ss_dssp TTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC-------CH-HHHH-HHC--CEECCHHHHHHHCSE
T ss_pred cccccCCCCCEEEEEccCHHHHHHHHHHHhCCCE---EEEECCCc-------ch-hhHh-hcC--cccCCHHHHHhhCCE
Confidence 4578899999999999999999999999964 88888742 11 1111 111 112479999999998
Q ss_pred EEec-CC----CCCCCHHHHHhhccCcEEEeccC
Q psy14495 266 FLGL-SV----SGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 266 liG~-S~----~g~ft~evv~~M~~~PiIfaLsN 294 (766)
++=+ .. .+.++++.+..|.+..++.-.|.
T Consensus 208 Vil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 208 VVLAVPLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp EEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred EEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 6533 22 35788889999998888887774
No 73
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.29 E-value=0.23 Score=52.96 Aligned_cols=172 Identities=11% Similarity=0.111 Sum_probs=110.3
Q ss_pred HHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHH
Q psy14495 103 VLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGS 179 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA 179 (766)
.+...+.+.+.+=+.....-..++++. .|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++
T Consensus 39 ~~~~~~~~~d~~i~~~~~~~~~~~l~~----~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gi~v~n~~g~~~~~vAE~~~~ 111 (313)
T 2ekl_A 39 ELLNIIGNYDIIVVRSRTKVTKDVIEK----GKKLKIIARAGIGLDNI-D-TEEAEK-RNIKVVYAPGASTDSAVELTIG 111 (313)
T ss_dssp HHHHHGGGCSEEEECSSSCBCHHHHHH----CTTCCEEEECSSCCTTB-C-HHHHHH-TTCEEECCTTTTHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCCCHHHHhh----CCCCeEEEEcCCCCCcc-C-HHHHHh-CCeEEEeCCCCCchHHHHHHHH
Confidence 344455666643222122223344443 46655565555554442 1 233344 3799998643 334445888
Q ss_pred HHHHHHhH----------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHH
Q psy14495 180 AILNGLKL----------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSN 243 (766)
Q Consensus 180 ~ll~al~~----------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~ 243 (766)
.+|+..|. .+..+.+.+|.|+|.|..|-.+|+.+...|++ ++.+|+.. +. ...
T Consensus 112 ~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~---V~~~d~~~-------~~-~~~ 180 (313)
T 2ekl_A 112 LMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAMGMK---VLAYDILD-------IR-EKA 180 (313)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCE---EEEECSSC-------CH-HHH
T ss_pred HHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEECCCc-------ch-hHH
Confidence 88888775 36789999999999999999999999999975 88888731 11 111
Q ss_pred HHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 244 KARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 244 k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
+..-++ ..++.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|.-
T Consensus 181 ~~~g~~---~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg 234 (313)
T 2ekl_A 181 EKINAK---AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRA 234 (313)
T ss_dssp HHTTCE---ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred HhcCce---ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence 111111 23799999999987643 2 2467889999999999898888863
No 74
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.27 E-value=0.066 Score=55.46 Aligned_cols=165 Identities=19% Similarity=0.280 Sum_probs=100.2
Q ss_pred ccchhhhHH-----HHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCccc-----------cccccCCCCchHHHHH-
Q psy14495 95 KPVMEGKAV-----LFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGG-----------INLEDIKAPECFYIEK- 155 (766)
Q Consensus 95 ~~i~~gK~~-----ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~-----------i~~ED~~~~~af~il~- 155 (766)
-||.-+++- .|.+ -|+| ..++.++.++.+++++.++ +.|.+ +.+=|- ++.|..+=.
T Consensus 8 ~pi~hS~SP~~hn~~~~~-~gl~~~Y~~~~v~~~~l~~~~~~~~---~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAv 82 (253)
T 3u62_A 8 YPVRHSISPRLYNEYFKR-AGMNHSYGMEEIPPESFDTEIRRIL---EEYDGFNATIPHKERVMRYVEP-SEDAQRIKAV 82 (253)
T ss_dssp SSCTTCSHHHHHHHHHHH-HTCCCEEEEEECCGGGHHHHHHHHH---HHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCC
T ss_pred CCccccccHHHHHHHHHH-cCCCCEEEeEecCHHHHHHHHHHHh---hCCCceeecCChHHHHHHHhCC-CHHHHHcCcc
Confidence 466555542 2333 3777 4566666677888888776 44543 455565 666644310
Q ss_pred -HHhhcCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccC
Q psy14495 156 -KLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYK 234 (766)
Q Consensus 156 -~~~~~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~ 234 (766)
-... + -=+|-|- .|++.+|+.. .+++ |++|+|||.+|-+++..|.+.|.. +|+++|+.-
T Consensus 83 NTi~~--~-~G~NTD~--------~G~~~~l~~~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~--~I~v~nR~~---- 142 (253)
T 3u62_A 83 NCVFR--G-KGYNTDW--------VGVVKSLEGV--EVKE-PVVVVGAGGAARAVIYALLQMGVK--DIWVVNRTI---- 142 (253)
T ss_dssp CEEET--T-EEECCHH--------HHHHHHTTTC--CCCS-SEEEECCSHHHHHHHHHHHHTTCC--CEEEEESCH----
T ss_pred eEeec--C-EEEcchH--------HHHHHHHHhc--CCCC-eEEEECcHHHHHHHHHHHHHcCCC--EEEEEeCCH----
Confidence 0000 0 2345554 3677788754 5788 999999999999999999999985 799998831
Q ss_pred CCCCCCcHHHHHhccc---cCCCCHHHHhccCcEEEecCCCC------CCCHHHHHhhccCcEEEeccC
Q psy14495 235 GRSELMDSNKARFIKD---TTARTLSDIIPNADIFLGLSVSG------VLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 235 ~r~~~l~~~k~~~a~~---~~~~~L~e~i~~~~vliG~S~~g------~ft~evv~~M~~~PiIfaLsN 294 (766)
+| -+.+++. ....++.++++.+|++|-+...| .+..+.+ .+..+|+-++-
T Consensus 143 ~k-------a~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l---~~~~~V~Divy 201 (253)
T 3u62_A 143 ER-------AKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSL---KNLSLVYDVIY 201 (253)
T ss_dssp HH-------HHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHH---TTCSEEEECSS
T ss_pred HH-------HHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHh---CcCCEEEEeeC
Confidence 11 1222221 12356888899999999654322 2333333 34666666543
No 75
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.25 E-value=0.098 Score=57.17 Aligned_cols=94 Identities=20% Similarity=0.356 Sum_probs=68.4
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-----cCCCCHHHHhccCcE
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-----TTARTLSDIIPNADI 265 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-----~~~~~L~e~i~~~~v 265 (766)
.+...+++|+|+|..|..+++.+...|. +++.+|+.. +.+...+..+... .+..++.+.++++|+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga---~V~~~d~~~-------~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDv 234 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA---TVTVLDINI-------DKLRQLDAEFCGRIHTRYSSAYELEGAVKRADL 234 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH-------HHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH-------HHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCE
Confidence 4778999999999999999999999997 499898731 1122222222211 122357888889999
Q ss_pred EEecCC-C-----CCCCHHHHHhhccCcEEEeccC
Q psy14495 266 FLGLSV-S-----GVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 266 liG~S~-~-----g~ft~evv~~M~~~PiIfaLsN 294 (766)
+|.+.. + ..++++.++.|.+.-+|.-+|-
T Consensus 235 Vi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 235 VIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp EEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred EEECCCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 997653 3 4579999999998888888874
No 76
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.14 E-value=0.18 Score=54.38 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=84.8
Q ss_pred CCcEEecCCc---hhHHHHHHHHHHHHhH-------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCC
Q psy14495 162 KIPVFHDDQH---GTAIIVGSAILNGLKL-------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFP 219 (766)
Q Consensus 162 ~~~~fnDD~q---GTa~v~lA~ll~al~~-------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~ 219 (766)
+|++.|---- .+|=-+++-+|+..|. .+..+...+|.|+|.|..|..+|+.+...|+.
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~ 189 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCP 189 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCC
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHCCCE
Confidence 6777775432 3444567778877653 24678999999999999999999999999975
Q ss_pred CccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 220 LQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 220 ~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
++.+|+.. .. .. .+ ....+|.|+++.+|+++=. . ..+.++++.++.|.+..++.-.|.
T Consensus 190 ---V~~~dr~~----~~---~~----g~---~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~sr 252 (333)
T 3ba1_A 190 ---ISYFSRSK----KP---NT----NY---TYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGR 252 (333)
T ss_dssp ---EEEECSSC----CT---TC----CS---EEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSC
T ss_pred ---EEEECCCc----hh---cc----Cc---eecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 88888742 11 11 01 1124799999999986633 2 146888899999998888887776
Q ss_pred CC
Q psy14495 295 PL 296 (766)
Q Consensus 295 Pt 296 (766)
-.
T Consensus 253 G~ 254 (333)
T 3ba1_A 253 GP 254 (333)
T ss_dssp GG
T ss_pred Cc
Confidence 43
No 77
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.03 E-value=0.034 Score=59.48 Aligned_cols=162 Identities=19% Similarity=0.198 Sum_probs=97.4
Q ss_pred ccchhhhH-----HHHhhhcCCC--ccccCCCCCCHHHHHHHHHHhCCCccc-----------cccccCCCCchHHHHH-
Q psy14495 95 KPVMEGKA-----VLFKKFAGID--VFDLEINETDPDKLCDIIFSLEPTFGG-----------INLEDIKAPECFYIEK- 155 (766)
Q Consensus 95 ~~i~~gK~-----~ly~~~~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~-----------i~~ED~~~~~af~il~- 155 (766)
-||.-+++ ..|.+ -|+| ..++.+..++.+++++.++.. .|.+ +.+=|--++.|..+=.
T Consensus 39 ~Pi~hS~SP~ihn~~f~~-~gl~~~Y~~~~v~~~~l~~~~~~~~~~--~~~G~nVTiP~K~~v~~~lD~ls~~A~~iGAV 115 (312)
T 3t4e_A 39 YPIRHSLSPEMQNKALEK-AGLPYTYMAFEVDNTTFASAIEGLKAL--KMRGTGVSMPNKQLACEYVDELTPAAKLVGAI 115 (312)
T ss_dssp SCCTTCSHHHHHHHHHHH-HTCSEEEEEEECCTTTHHHHHHHHHHT--TCCEEEECTTSHHHHGGGCSEECHHHHHHTCC
T ss_pred CCccccccHHHHHHHHHH-cCCCcEEEeEecCHHHHHHHHHHHhhC--CCCEEEECchhHHHHHHHhhhcCHHHHHhCce
Confidence 56655554 23333 4788 467777778899999988763 4543 3444433344432200
Q ss_pred ---HHhhcCCCcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 156 ---KLRNHMKIPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 156 ---~~~~~~~~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
..++ -.+-=+|-| -.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|++ +|+++++.
T Consensus 116 NTi~~~~-g~l~G~NTD--------~~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~--~v~v~nRt--- 181 (312)
T 3t4e_A 116 NTIVNDD-GYLRGYNTD--------GTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIK--EIKLFNRK--- 181 (312)
T ss_dssp SEEEEET-TEEEEECHH--------HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEECS---
T ss_pred eEEEecC-CEEEEeCCc--------HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCC--EEEEEECC---
Confidence 0011 112233444 246777888788899999999999999999999999999987 79999884
Q ss_pred cCCCCCCCcHHHHHhccc-------cCCCCH---HHHhccCcEEEecCCCCC
Q psy14495 233 YKGRSELMDSNKARFIKD-------TTARTL---SDIIPNADIFLGLSVSGV 274 (766)
Q Consensus 233 ~~~r~~~l~~~k~~~a~~-------~~~~~L---~e~i~~~~vliG~S~~g~ 274 (766)
..|.+........+... .+..++ .+.++.+|++|-+...|.
T Consensus 182 -~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 182 -DDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGM 232 (312)
T ss_dssp -STHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTS
T ss_pred -CchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcCCC
Confidence 11101111111122111 122344 677888999997765443
No 78
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.96 E-value=0.14 Score=56.46 Aligned_cols=176 Identities=16% Similarity=0.182 Sum_probs=96.9
Q ss_pred HHHHhhhcCCCccccCCCCCCHHHHHHHHH-HhCCC-ccccccccCCCCchHHHHHHHhhcCCCcEEecCCchhHHHHHH
Q psy14495 102 AVLFKKFAGIDVFDLEINETDPDKLCDIIF-SLEPT-FGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQHGTAIIVGS 179 (766)
Q Consensus 102 ~~ly~~~~gi~~l~v~~~~~~~~~~v~~v~-~~~p~-~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~qGTa~v~lA 179 (766)
-.++...+|+|.+++|-.. -..++-+.+. ...|. ++. +=+.-...++.+-++.+....+. .+ +..++.+
T Consensus 83 ~~i~~v~~Glds~~vGe~~-Il~qvk~~~~~~~~~G~~~~--~~~~~~~~a~~~~k~v~~~~~~~-~~-----~~s~a~~ 153 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQE-ILRQVKKAYDRAARLGTLDE--ALKIVFRRAINLGKRAREETRIS-EG-----AVSIGSA 153 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHH-HHHHHHHHHHHHHHHTCCCH--HHHHHHHHHHHHHHHHHHHSSTT-CS-----CCSHHHH
T ss_pred hhheeeccCCCCCcCCcch-hHHHHHHHHHHHHHcCCchH--HHHHHHHHHhhhhccCcchhhhc-CC-----CccHHHH
Confidence 3667778899988875321 0111111111 11111 211 11112234777777766543322 22 2223333
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHh-ccccCCCCHHH
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARF-IKDTTARTLSD 258 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~-a~~~~~~~L~e 258 (766)
++--+-+.. .++.+.+++|+|+|..|..++..+...|++ +++++|+.. .| .......+ +...+..++.+
T Consensus 154 av~~a~~~~-~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~--~V~v~~r~~----~r---a~~la~~~g~~~~~~~~l~~ 223 (404)
T 1gpj_A 154 AVELAEREL-GSLHDKTVLVVGAGEMGKTVAKSLVDRGVR--AVLVANRTY----ER---AVELARDLGGEAVRFDELVD 223 (404)
T ss_dssp HHHHHHHHH-SCCTTCEEEEESCCHHHHHHHHHHHHHCCS--EEEEECSSH----HH---HHHHHHHHTCEECCGGGHHH
T ss_pred HHHHHHHHh-ccccCCEEEEEChHHHHHHHHHHHHHCCCC--EEEEEeCCH----HH---HHHHHHHcCCceecHHhHHH
Confidence 322111121 257889999999999999999999999986 799888731 11 11111122 11112346888
Q ss_pred HhccCcEEEecCC--CCCCCHHHHHh--hc----cCcEEEeccCCC
Q psy14495 259 IIPNADIFLGLSV--SGVLKKEMVLQ--MA----KNPIILALANPL 296 (766)
Q Consensus 259 ~i~~~~vliG~S~--~g~ft~evv~~--M~----~~PiIfaLsNPt 296 (766)
.++++|++|-+.. ...++++.++. |. .+-+++-++.|.
T Consensus 224 ~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 224 HLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred HhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 8889999987654 34567888887 43 334666677654
No 79
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=94.95 E-value=0.22 Score=53.72 Aligned_cols=171 Identities=12% Similarity=0.104 Sum_probs=107.0
Q ss_pred HHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHH
Q psy14495 104 LFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSA 180 (766)
Q Consensus 104 ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ 180 (766)
+...+.+.+.+=+.....-..++++. .|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++.
T Consensus 61 ~~~~~~~~d~li~~~~~~~~~~~l~~----~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~v~n~p~~~~~~vAE~~~~l 133 (335)
T 2g76_A 61 LIAELQDCEGLIVRSATKVTADVINA----AEKLQVVGRAGTGVDNV-D-LEAATR-KGILVMNTPNGNSLSAAELTCGM 133 (335)
T ss_dssp HHHHGGGCSEEEECSSSCBCHHHHHH----CSSCCEEEESSSSCTTB-C-HHHHHH-HTCEEECCSSTTHHHHHHHHHHH
T ss_pred HHHHhcCceEEEEcCCCCCCHHHHhh----CCCCcEEEECCCCcchh-C-hHHHHh-CCeEEEECCCccchHHHHHHHHH
Confidence 34445566643221111223444443 45554454444443332 1 222333 3789998643 2344557888
Q ss_pred HHHHHhH------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcH
Q psy14495 181 ILNGLKL------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDS 242 (766)
Q Consensus 181 ll~al~~------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~ 242 (766)
+|+..|. .+..+.+.+|.|+|.|.-|-.+|+.+...|++ ++.+|+.. +. ..
T Consensus 134 ~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~---V~~~d~~~-------~~-~~ 202 (335)
T 2g76_A 134 IMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMK---TIGYDPII-------SP-EV 202 (335)
T ss_dssp HHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSS-------CH-HH
T ss_pred HHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCE---EEEECCCc-------ch-hh
Confidence 8887764 25679999999999999999999999998965 88888631 10 11
Q ss_pred HHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 243 NKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 243 ~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
.+ .+ .....+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=.|.-
T Consensus 203 ~~-~~--g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg 257 (335)
T 2g76_A 203 SA-SF--GVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARG 257 (335)
T ss_dssp HH-HT--TCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred hh-hc--CceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence 11 11 11124799999999987643 1 2467889999999999999988874
No 80
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=94.83 E-value=0.16 Score=54.62 Aligned_cols=169 Identities=15% Similarity=0.184 Sum_probs=106.8
Q ss_pred HhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCCc---hhHHHHHHHH
Q psy14495 105 FKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQH---GTAIIVGSAI 181 (766)
Q Consensus 105 y~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~q---GTa~v~lA~l 181 (766)
...+.+.|++=+.....-..++++...+ ++.-.|+.--.+..|- . ++..++ .+|++.|---. .+|=-+++.+
T Consensus 40 ~~~~~~~d~~i~~~~~~~~~~~l~~~~~--~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~v~n~p~~~~~~vAE~~~~l~ 114 (331)
T 1xdw_A 40 AEMAAGFDAVILRGNCFANKQNLDIYKK--LGVKYILTRTAGTDHI-D-KEYAKE-LGFPMAFVPRYSPNAIAELAVTQA 114 (331)
T ss_dssp HHTTTTCSEEEECTTCCBCHHHHHHHHH--HTCCEEEESSSCCTTB-C-HHHHHH-TTCCEECCCCCCHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeCCCCCCHHHHhhCcc--cCceEEEEcccccccc-C-HHHHHh-CCcEEEeCCCCCcHHHHHHHHHHH
Confidence 3445555543222112223556555433 0122344444444432 1 223333 37888886433 3455578888
Q ss_pred HHHHhH-------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcH
Q psy14495 182 LNGLKL-------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDS 242 (766)
Q Consensus 182 l~al~~-------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~ 242 (766)
|+..|. .+..+.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+.. .. ...
T Consensus 115 L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~---V~~~d~~~----~~--~~~- 184 (331)
T 1xdw_A 115 MMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGAT---VIGEDVFE----IK--GIE- 184 (331)
T ss_dssp HHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC----CC--SCT-
T ss_pred HHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCE---EEEECCCc----cH--HHH-
Confidence 888761 23468889999999999999999999999976 88888742 11 111
Q ss_pred HHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 243 NKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 243 ~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
.++. ..+|.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|.
T Consensus 185 ---~~~~---~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~sr 235 (331)
T 1xdw_A 185 ---DYCT---QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCAR 235 (331)
T ss_dssp ---TTCE---ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSC
T ss_pred ---hccc---cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 1121 23799999999988753 1 247899999999999999998884
No 81
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=94.82 E-value=0.18 Score=54.76 Aligned_cols=122 Identities=10% Similarity=0.134 Sum_probs=88.9
Q ss_pred CCcEEecC--CchhHHHHHHHHHHHHhH----------------------------hCCcCCCceEEEECcchhhHHHHH
Q psy14495 162 KIPVFHDD--QHGTAIIVGSAILNGLKL----------------------------VKKKMKDCKLVVSGAGAAALACLD 211 (766)
Q Consensus 162 ~~~~fnDD--~qGTa~v~lA~ll~al~~----------------------------~~~~l~d~~iv~~GaG~ag~gia~ 211 (766)
+|+|.|.- -..+|=-+++-+|+..|. .+..|.+.+|.|+|.|..|-.+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 79999832 234555678888887764 256789999999999999999999
Q ss_pred HHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccC
Q psy14495 212 LIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKN 286 (766)
Q Consensus 212 ~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~ 286 (766)
.+...|+. ++.+|+.. . -...+..-+ ....+|.|+++.+|+++=. . +.+.++++.++.|.+.
T Consensus 178 ~l~~~G~~---V~~~d~~~--~------~~~~~~~g~--~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~g 244 (352)
T 3gg9_A 178 YGRAFGMN---VLVWGREN--S------KERARADGF--AVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPT 244 (352)
T ss_dssp HHHHTTCE---EEEECSHH--H------HHHHHHTTC--EECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTT
T ss_pred HHHhCCCE---EEEECCCC--C------HHHHHhcCc--eEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCC
Confidence 99999985 88888742 0 001111101 1234899999999987632 1 2578999999999999
Q ss_pred cEEEeccCCC
Q psy14495 287 PIILALANPL 296 (766)
Q Consensus 287 PiIfaLsNPt 296 (766)
.++.-.|.-.
T Consensus 245 ailIN~aRg~ 254 (352)
T 3gg9_A 245 ALFVNTSRAE 254 (352)
T ss_dssp CEEEECSCGG
T ss_pred cEEEECCCch
Confidence 9999888743
No 82
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.81 E-value=0.015 Score=54.35 Aligned_cols=89 Identities=12% Similarity=0.258 Sum_probs=56.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-cCCCCHHHHhccCcEEEecCC-
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-TTARTLSDIIPNADIFLGLSV- 271 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-~~~~~L~e~i~~~~vliG~S~- 271 (766)
..||+|+|+|..|..++..|.+.|.. ++++|++ . +........|--. ....++.++++++|++|=+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~---v~v~~r~----~---~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK---VTVAGRN----I---DHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE---EEEEESC----H---HHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE---EEEEcCC----H---HHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCC
Confidence 77999999999999999988887743 8888873 1 1122222222111 234689999999999886654
Q ss_pred C-CCCCHHHHHhhccCcEEEeccCC
Q psy14495 272 S-GVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 272 ~-g~ft~evv~~M~~~PiIfaLsNP 295 (766)
+ ..++.++ +.+.-+|+-+++|
T Consensus 91 ~~~~~~~~~---l~~g~~vid~~~p 112 (144)
T 3oj0_A 91 KTPIVEERS---LMPGKLFIDLGNP 112 (144)
T ss_dssp SSCSBCGGG---CCTTCEEEECCSS
T ss_pred CCcEeeHHH---cCCCCEEEEccCC
Confidence 2 2344332 2345566666665
No 83
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.77 E-value=0.28 Score=52.93 Aligned_cols=142 Identities=14% Similarity=0.172 Sum_probs=94.0
Q ss_pred CCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhH--------------------hCCc
Q psy14495 135 PTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKL--------------------VKKK 191 (766)
Q Consensus 135 p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~--------------------~~~~ 191 (766)
|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++-+|+..|. .|..
T Consensus 92 p~Lk~I~~~g~G~d~i-d-~~~a~~-~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 168 (340)
T 4dgs_A 92 PSLGIIAINGVGTDKV-D-LARARR-RNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHS 168 (340)
T ss_dssp SSCCEEEEESSCCTTB-C-HHHHHH-TTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCC
T ss_pred CCCEEEEECCCCcccc-C-HHHHHh-CCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCcccc
Confidence 5554444444444432 1 223333 3788988543 23566678888888763 2467
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S 270 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S 270 (766)
|.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+.. .+ ... + ....+|.|+++.+|+++=. .
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~~---V~~~dr~~----~~--~~~-----~---~~~~sl~ell~~aDvVil~vP 231 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGMS---VRYWNRST----LS--GVD-----W---IAHQSPVDLARDSDVLAVCVA 231 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSC----CT--TSC-----C---EECSSHHHHHHTCSEEEECC-
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCc----cc--ccC-----c---eecCCHHHHHhcCCEEEEeCC
Confidence 8999999999999999999999998975 88888742 11 000 1 1135799999999987632 2
Q ss_pred ----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 271 ----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 271 ----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
+.+.++++.++.|.+..++.-.|.-.
T Consensus 232 ~t~~t~~li~~~~l~~mk~gailIN~aRG~ 261 (340)
T 4dgs_A 232 ASAATQNIVDASLLQALGPEGIVVNVARGN 261 (340)
T ss_dssp ---------CHHHHHHTTTTCEEEECSCC-
T ss_pred CCHHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 24689999999999999999888754
No 84
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.73 E-value=0.074 Score=58.07 Aligned_cols=180 Identities=19% Similarity=0.163 Sum_probs=104.8
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCCHHHHHH-HHHHhCCCcc-ccccccCCCCchHHHHHHHhhcCC----CcEE
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETDPDKLCD-IIFSLEPTFG-GINLEDIKAPECFYIEKKLRNHMK----IPVF 166 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~~~~~v~-~v~~~~p~~g-~i~~ED~~~~~af~il~~~~~~~~----~~~f 166 (766)
+..+-|| +++|++ .+++.-.....++++. +.+.+.+-.| .|-=+|++.. . +.+...-++++ -|+-
T Consensus 62 a~~mt~K~al~~lp~GG~Kggi~~dP~~~~~~~~~r~~~~~~~~l~g~~i~A~D~Gt~-~-~~m~~l~~~~~~~tGK~~~ 139 (364)
T 1leh_A 62 ARGMTYKNAAAGLNLGGGKTVIIGDPFADKNEDMFRALGRFIQGLNGRYITAEDVGTT-V-DDMDLIHQETDYVTGISPA 139 (364)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEEESCTTTTCCHHHHHHHHHHHHTTTTSEEBCBCTTCC-H-HHHHHHHTTCSCBCSCCHH
T ss_pred HHHHHHHHHhcCCCCcCcceEEeCCCCCCCHHHHHHHHHHHHHHhcCceEEcccCCCC-H-HHHHHHHHhcchhcccccc
Confidence 5666665 556777 3443222222333333 2333334333 2555676643 2 23334333331 1211
Q ss_pred ----ecCCchhHHHHHHHHHHHHhHh-CC-cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC
Q psy14495 167 ----HDDQHGTAIIVGSAILNGLKLV-KK-KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM 240 (766)
Q Consensus 167 ----nDD~qGTa~v~lA~ll~al~~~-~~-~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l 240 (766)
.|-..-||-=+.-++..+++.. |. +|++.+|+|.|+|..|..+|+.|.+.|.+ +++.|++ + +.+
T Consensus 140 ~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~Gak---Vvv~D~~------~-~~l 209 (364)
T 1leh_A 140 FGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAK---LVVTDVN------K-AAV 209 (364)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC------H-HHH
T ss_pred cCCCCCcccchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCE---EEEEcCC------H-HHH
Confidence 1111235555555566666664 76 89999999999999999999999999975 8888862 1 123
Q ss_pred cHHHHHhccccCCCCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccC
Q psy14495 241 DSNKARFIKDTTARTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 241 ~~~k~~~a~~~~~~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
.++...|- ...-++.+... .+|+++=+...+.++++.++.| ...+|.--+|
T Consensus 210 ~~~a~~~g--a~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~l-g~~iV~e~An 261 (364)
T 1leh_A 210 SAAVAEEG--ADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQL-KAKVIAGSAD 261 (364)
T ss_dssp HHHHHHHC--CEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHC-CCSEECCSCS
T ss_pred HHHHHHcC--CEEEChHHHhccCCcEeeccchHHHhCHHHHHhC-CCcEEEeCCC
Confidence 33333331 11223445554 5799998777889999999888 4567766666
No 85
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.64 E-value=0.069 Score=56.50 Aligned_cols=86 Identities=12% Similarity=0.072 Sum_probs=60.9
Q ss_pred HHHHHHHhHhC-CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc----cCC
Q psy14495 179 SAILNGLKLVK-KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD----TTA 253 (766)
Q Consensus 179 A~ll~al~~~~-~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~----~~~ 253 (766)
.|++.+|+..+ .+++..+++|+|||.+|.+++..|.+.|.. +++++|+.- + ........+... .+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~--~V~v~nR~~----~---ka~~la~~~~~~~~~~~~~ 195 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAE--RIDMANRTV----E---KAERLVREGDERRSAYFSL 195 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCS--EEEEECSSH----H---HHHHHHHHSCSSSCCEECH
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCC--EEEEEeCCH----H---HHHHHHHHhhhccCceeeH
Confidence 67778888777 788999999999999999999999999986 799988731 1 112222222110 011
Q ss_pred CCHHHHhccCcEEEecCCCC
Q psy14495 254 RTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 254 ~~L~e~i~~~~vliG~S~~g 273 (766)
.++.++++.+|++|-+...+
T Consensus 196 ~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 196 AEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp HHHHHTGGGCSEEEECSCTT
T ss_pred HHHHhhhccCCEEEECCCCC
Confidence 24677788899999776534
No 86
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.59 E-value=0.22 Score=53.61 Aligned_cols=145 Identities=15% Similarity=0.149 Sum_probs=97.3
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEec-CCc--hhHHHHHHHHHHHHhH-------------------hCCc
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHD-DQH--GTAIIVGSAILNGLKL-------------------VKKK 191 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnD-D~q--GTa~v~lA~ll~al~~-------------------~~~~ 191 (766)
.|+.-.|+.--.+..|- . ++..++ .+|++.|- +.. .+|=-+++-+|+..|. .+..
T Consensus 62 ~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 138 (334)
T 2pi1_A 62 MPRLKLIHTRSVGFDHI-D-LDYCKK-KGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARE 138 (334)
T ss_dssp CTTCCEEEESSSCCTTB-C-HHHHHH-HTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCC
T ss_pred CCCCeEEEECCcccccc-C-HHHHHH-CCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCcccee
Confidence 34443444444443332 1 223333 36888885 332 3555678888887752 3567
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S 270 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S 270 (766)
|.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+.. + ..... ......+|.|+++.+|+++=. .
T Consensus 139 l~g~tvgIiG~G~IG~~vA~~l~~~G~~---V~~~d~~~-------~--~~~~~---~g~~~~~l~ell~~aDvV~l~~P 203 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGMK---VLCYDVVK-------R--EDLKE---KGCVYTSLDELLKESDVISLHVP 203 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC-------C--HHHHH---TTCEECCHHHHHHHCSEEEECCC
T ss_pred ccCceEEEECcCHHHHHHHHHHHHCcCE---EEEECCCc-------c--hhhHh---cCceecCHHHHHhhCCEEEEeCC
Confidence 8999999999999999999999999975 88888742 1 11111 111223599999999987633 1
Q ss_pred ----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 271 ----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 271 ----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
+.+.++++.++.|.+..++.=.|.-.
T Consensus 204 ~t~~t~~li~~~~l~~mk~gailIN~aRg~ 233 (334)
T 2pi1_A 204 YTKETHHMINEERISLMKDGVYLINTARGK 233 (334)
T ss_dssp CCTTTTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred CChHHHHhhCHHHHhhCCCCcEEEECCCCc
Confidence 25689999999999999999888643
No 87
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.44 E-value=0.24 Score=54.86 Aligned_cols=166 Identities=17% Similarity=0.232 Sum_probs=102.3
Q ss_pred HHHHH-HHHHhCCCccc---cccccCCCCc--hHHHHHHHhhcCCC---cEEe----------cCCchhHHHHHHHHHHH
Q psy14495 124 DKLCD-IIFSLEPTFGG---INLEDIKAPE--CFYIEKKLRNHMKI---PVFH----------DDQHGTAIIVGSAILNG 184 (766)
Q Consensus 124 ~~~v~-~v~~~~p~~g~---i~~ED~~~~~--af~il~~~~~~~~~---~~fn----------DD~qGTa~v~lA~ll~a 184 (766)
+.|.+ +++.+.+-.|. |-=+|++..- ---+.+.|+...+. .++- +.-.-||-=+.-++-.+
T Consensus 120 ~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~ 199 (415)
T 2tmg_A 120 ERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLA 199 (415)
T ss_dssp HHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHH
Confidence 33444 46667665542 5667776541 22244566431111 1221 22234666666677788
Q ss_pred HhHhCCcCCCceEEEECcchhhHHHHHHHHH-cCCCCccEEEEcCCccccCCCCCCCcHHHH-HhccccC---------C
Q psy14495 185 LKLVKKKMKDCKLVVSGAGAAALACLDLIID-LGFPLQNIFVTDLAGVLYKGRSELMDSNKA-RFIKDTT---------A 253 (766)
Q Consensus 185 l~~~~~~l~d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~-~~a~~~~---------~ 253 (766)
++..|.+++..||+|.|.|..|...+++|.+ .|.+ =+-+.|++|-++... .++..+. .+..... .
T Consensus 200 ~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~Gak--vVavsD~~G~i~dp~--Gld~~~l~~~~~~~g~l~~y~~a~~ 275 (415)
T 2tmg_A 200 MDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSK--VVAVSDSRGGIYNPE--GFDVEELIRYKKEHGTVVTYPKGER 275 (415)
T ss_dssp HHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCE--EEEEECSSCEEECTT--CCCHHHHHHHHHHSSCSTTCSSSEE
T ss_pred HHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCE--EEEEEeCCCeEECCC--CCCHHHHHHHHHhhCCcccCCCceE
Confidence 8889999999999999999999999999999 8876 233999999998765 3433221 1111110 0
Q ss_pred CCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccC
Q psy14495 254 RTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 254 ~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
-+-.|..+ .+|||+-+..++..|++-.+.+ +-.+|.--+|
T Consensus 276 ~~~~eil~~~~DIliP~A~~n~i~~~~a~~l-~ak~V~EgAN 316 (415)
T 2tmg_A 276 ITNEELLELDVDILVPAALEGAIHAGNAERI-KAKAVVEGAN 316 (415)
T ss_dssp ECHHHHTTCSCSEEEECSSTTSBCHHHHTTC-CCSEEECCSS
T ss_pred cCchhhhcCCCcEEEecCCcCccCcccHHHc-CCeEEEeCCC
Confidence 12344444 3588888887777887777766 3445555555
No 88
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=94.42 E-value=0.36 Score=53.14 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=97.8
Q ss_pred CCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhHh--------------------CC
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKLV--------------------KK 190 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~~--------------------~~ 190 (766)
.|+.-.|+.--.+..|- . ++..++ .+|+|.|--- +.+|=-+++-+|+..|.. +.
T Consensus 111 ~p~Lk~I~~~g~G~d~i-D-~~aa~~-~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~ 187 (393)
T 2nac_A 111 AKNLKLALTAGIGSDHV-D-LQSAID-RNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAY 187 (393)
T ss_dssp CTTCCEEEESSSCCTTB-C-HHHHHH-TTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCC
T ss_pred CCCCcEEEEcCcccccc-C-HHHHhc-CCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCc
Confidence 45554454444444332 2 233333 3799999432 345555788888887632 56
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL- 269 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~- 269 (766)
.|.+.++.|+|.|..|-.+|+.+...|+. ++.+|+.. ......+..=++ ...+|.|+++.+|+++=.
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~---V~~~d~~~-------~~~~~~~~~G~~--~~~~l~ell~~aDvV~l~~ 255 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVH---LHYTDRHR-------LPESVEKELNLT--WHATREDMYPVCDVVTLNC 255 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCE---EEEECSSC-------CCHHHHHHHTCE--ECSSHHHHGGGCSEEEECS
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCE---EEEEcCCc-------cchhhHhhcCce--ecCCHHHHHhcCCEEEEec
Confidence 79999999999999999999999999965 88888632 111111111011 124799999999987633
Q ss_pred C----CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 270 S----VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 270 S----~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
. +.+.++++.++.|.+..++.-.|.
T Consensus 256 Plt~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 256 PLHPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 2 246899999999999999988886
No 89
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.38 E-value=0.33 Score=53.66 Aligned_cols=170 Identities=15% Similarity=0.137 Sum_probs=111.4
Q ss_pred HHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHH
Q psy14495 103 VLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGS 179 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA 179 (766)
.|...+.+.|.+=+...+.-..++++. .|+.-.|+.--.+..|- . ++..++ .+|+|+|--- +.+|=-+++
T Consensus 40 ~l~~~~~~~d~l~~~~~~~~~~~~l~~----~~~Lk~I~~~~~G~d~i-D-~~~a~~-~GI~V~n~p~~n~~~vAE~~~~ 112 (404)
T 1sc6_A 40 QLKESIRDAHFIGLRSRTHLTEDVINA----AEKLVAIGAFAIGTNQV-D-LDAAAK-RGIPVFNAPFSNTRSVAELVIG 112 (404)
T ss_dssp HHHHHTTSCSEEEECSSCCBCHHHHHH----CSSCCEEEECSSCCTTB-C-HHHHHH-TTCCEECCTTTTHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCCCHHHHhh----CCCCcEEEECCcccCcc-C-HHHHHh-CCCEEEecCcccHHHHHHHHHH
Confidence 445556666654322222223455543 35543444433443331 1 233344 3799999654 445556889
Q ss_pred HHHHHHhH------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCc
Q psy14495 180 AILNGLKL------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMD 241 (766)
Q Consensus 180 ~ll~al~~------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~ 241 (766)
.+|+..|. .+..|...++.|+|-|..|..+|+.+...|++ ++.+|+..- . .+.
T Consensus 113 ~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~---V~~~d~~~~----~--~~~ 183 (404)
T 1sc6_A 113 ELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMY---VYFYDIENK----L--PLG 183 (404)
T ss_dssp HHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCC----C--CCT
T ss_pred HHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHCCCE---EEEEcCCch----h--ccC
Confidence 99988774 25679999999999999999999999999976 888997421 1 110
Q ss_pred HHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 242 SNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 242 ~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
-+ ....+|.|+++.+|+++=. . +.+.++++.+..|.+.-++.=.|.=
T Consensus 184 -----~~--~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg 235 (404)
T 1sc6_A 184 -----NA--TQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRG 235 (404)
T ss_dssp -----TC--EECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred -----Cc--eecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCC
Confidence 01 1234799999999987633 1 2468999999999999999988863
No 90
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.38 E-value=0.15 Score=56.73 Aligned_cols=189 Identities=17% Similarity=0.169 Sum_probs=109.9
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCC---CHHHHHH-HHHHhCCCcc---ccccccCCCCc--hHHHHHHHhhcCCC
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINET---DPDKLCD-IIFSLEPTFG---GINLEDIKAPE--CFYIEKKLRNHMKI 163 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~---~~~~~v~-~v~~~~p~~g---~i~~ED~~~~~--af~il~~~~~~~~~ 163 (766)
++++-|| ++.|+. .+++.-... ..+.|.+ +++.+.+-.| -|-=+|++..- ---+.+.|+...+.
T Consensus 88 a~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~ 167 (421)
T 2yfq_A 88 SLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGE 167 (421)
T ss_dssp HHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCC
Confidence 5566665 456776 233311112 2344454 4666776654 26668888642 22456677532111
Q ss_pred ----cEE----------ecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEE-EEcC
Q psy14495 164 ----PVF----------HDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIF-VTDL 228 (766)
Q Consensus 164 ----~~f----------nDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~-~~D~ 228 (766)
.++ ++.-.-||-=+.-++-.+++..|.+|+..||+|.|.|..|...|++|.+.|.+ ++ +.|+
T Consensus 168 ~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~Gak---vVavsD~ 244 (421)
T 2yfq_A 168 RMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGK---VCAIAEW 244 (421)
T ss_dssp CCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCC---EEECCBC
T ss_pred CCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCE---EEEEEec
Confidence 112 22233466666667778888899999999999999999999999999999976 55 9999
Q ss_pred C-----ccccCCCCCCCcH-----HHHHhcccc-----CCCCHHHHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEec
Q psy14495 229 A-----GVLYKGRSELMDS-----NKARFIKDT-----TARTLSDIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 229 ~-----Glv~~~r~~~l~~-----~k~~~a~~~-----~~~~L~e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaL 292 (766)
+ |-|+... .++. +|...-+-. ..-+-.+... .+|||+-+..++.+|++-.+.+ +-.+|.--
T Consensus 245 ~~~~~~G~i~d~~--Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~~n~i~~~~A~~l-~ak~VvEg 321 (421)
T 2yfq_A 245 DRNEGNYALYNEN--GIDFKELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAALENVITGERAKTI-NAKLVCEA 321 (421)
T ss_dssp CSSSCSBCCBCSS--CCCHHHHHHHHHHHCC---------------------CEEECSCSSCSCHHHHTTC-CCSEEECC
T ss_pred CCCccceEEECCC--CCCHHHHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCCcCcCCcccHHHc-CCeEEEeC
Confidence 9 9999765 3433 222111000 0001112222 2577877776777777777666 34455544
Q ss_pred cC
Q psy14495 293 AN 294 (766)
Q Consensus 293 sN 294 (766)
+|
T Consensus 322 AN 323 (421)
T 2yfq_A 322 AN 323 (421)
T ss_dssp SS
T ss_pred Cc
Confidence 44
No 91
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=94.33 E-value=0.44 Score=51.49 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCcEEecCC---chhHHHHHHHHHHHHhH-------------------------hCCcCCCceEEEECcchhhHHHHHHH
Q psy14495 162 KIPVFHDDQ---HGTAIIVGSAILNGLKL-------------------------VKKKMKDCKLVVSGAGAAALACLDLI 213 (766)
Q Consensus 162 ~~~~fnDD~---qGTa~v~lA~ll~al~~-------------------------~~~~l~d~~iv~~GaG~ag~gia~~l 213 (766)
+|+|.|--- +.+|=-+++.+|+..|. .+..+...+|.|+|.|..|-.+|+.+
T Consensus 103 gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l 182 (348)
T 2w2k_A 103 GVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKA 182 (348)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHH
T ss_pred CcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHH
Confidence 677777543 33444567777775542 25678999999999999999999999
Q ss_pred H-HcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCc
Q psy14495 214 I-DLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNP 287 (766)
Q Consensus 214 ~-~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~P 287 (766)
. ..|+. ++.+|+.. +.....+..-++. ..++.|+++.+|+++=. . ..+.++++.++.|.+..
T Consensus 183 ~~~~G~~---V~~~d~~~-------~~~~~~~~~g~~~--~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~ga 250 (348)
T 2w2k_A 183 VHGLGMK---LVYYDVAP-------ADAETEKALGAER--VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGS 250 (348)
T ss_dssp HHTTCCE---EEEECSSC-------CCHHHHHHHTCEE--CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTE
T ss_pred HHhcCCE---EEEECCCC-------cchhhHhhcCcEE--eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCC
Confidence 9 88974 88888742 1111111111111 14799999999987633 2 24788899999999888
Q ss_pred EEEeccCC
Q psy14495 288 IILALANP 295 (766)
Q Consensus 288 iIfaLsNP 295 (766)
++.-.|.-
T Consensus 251 ilin~srg 258 (348)
T 2w2k_A 251 RIVNTARG 258 (348)
T ss_dssp EEEECSCG
T ss_pred EEEECCCC
Confidence 88766653
No 92
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.29 E-value=0.09 Score=53.66 Aligned_cols=105 Identities=16% Similarity=0.300 Sum_probs=61.9
Q ss_pred hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc--cCCCCCCCcH-HHHHhccc---cCCCCHHHHhc
Q psy14495 188 VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL--YKGRSELMDS-NKARFIKD---TTARTLSDIIP 261 (766)
Q Consensus 188 ~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv--~~~r~~~l~~-~k~~~a~~---~~~~~L~e~i~ 261 (766)
...++...||.|+|+|..|.++|..|.+.|. +++++|++-=- .+.....+.. ....++.. ....++.|+++
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 89 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGH---EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA 89 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCC---EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh
Confidence 4557888999999999999999999999985 48888875211 0000000000 01222221 12357899999
Q ss_pred cCcEEEecCCCCCCCHHHHHhh-c---cCcEEEeccCCC
Q psy14495 262 NADIFLGLSVSGVLKKEMVLQM-A---KNPIILALANPL 296 (766)
Q Consensus 262 ~~~vliG~S~~g~ft~evv~~M-~---~~PiIfaLsNPt 296 (766)
.+|++| ++.+.....++++.+ . +..+|.-+|||.
T Consensus 90 ~aDvVi-lavp~~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 90 GAELVV-NATEGASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp HCSEEE-ECSCGGGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred cCCEEE-EccCcHHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 999877 554333334555554 2 567888999873
No 93
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.19 E-value=0.17 Score=52.71 Aligned_cols=151 Identities=11% Similarity=0.092 Sum_probs=90.9
Q ss_pred hcCCCc--cccCCCCCCHHHHHHHHH-HhCCCcc----ccccccCCCCchHHHHHHHhhc----CCCcEEecCCchhHHH
Q psy14495 108 FAGIDV--FDLEINETDPDKLCDIIF-SLEPTFG----GINLEDIKAPECFYIEKKLRNH----MKIPVFHDDQHGTAII 176 (766)
Q Consensus 108 ~~gi~~--l~v~~~~~~~~~~v~~v~-~~~p~~g----~i~~ED~~~~~af~il~~~~~~----~~~~~fnDD~qGTa~v 176 (766)
-.|+|. .+..+..++..++++.+. .+-|. | .+.++-..-..+.+++++.+.. .+..+|. |..|.- .
T Consensus 24 ~~g~~~~y~~~~v~~~~~~~~~~~~~~~~~~~-g~~~t~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~-~~~G~n-T 100 (287)
T 1lu9_A 24 DGGADHITGYGNVTPDNVGAYVDGTIYTRGGK-EKQSTAIFVGGGDMAAGERVFEAVKKRFFGPFRVSCML-DSNGSN-T 100 (287)
T ss_dssp HTTCSEEEEESSCCTTTHHHHHHHHHSSCCGG-GGGGEEEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEE-CSTTHH-H
T ss_pred ccCcceEeccCCcCHHHHHhhhcceEEecCcc-ccccceEEEccchHHHHHHHHHHHHHhcCCCeEEEEec-CCCcCC-c
Confidence 467774 345555566666666532 11111 1 1223333334788888887743 2344554 455632 2
Q ss_pred HHHHHHHHHhHh-CCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-----
Q psy14495 177 VGSAILNGLKLV-KKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----- 249 (766)
Q Consensus 177 ~lA~ll~al~~~-~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----- 249 (766)
.-.|++.+++.. +.+++..+++|.| +|.+|.+++..|.+.|.+ ++++|++- .+ .......+..
T Consensus 101 d~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~---V~i~~R~~----~~---~~~l~~~~~~~~~~~ 170 (287)
T 1lu9_A 101 TAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKL----DK---AQAAADSVNKRFKVN 170 (287)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSH----HH---HHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCH----HH---HHHHHHHHHhcCCcE
Confidence 445677777766 7788999999999 999999999999999964 99888741 11 1111111111
Q ss_pred ----c-cCCCCHHHHhccCcEEEecCC
Q psy14495 250 ----D-TTARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 250 ----~-~~~~~L~e~i~~~~vliG~S~ 271 (766)
+ ++..++.++++.+|++|=+.+
T Consensus 171 ~~~~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTAAETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred EEEecCCCHHHHHHHHHhCCEEEECCC
Confidence 1 112346677777899987664
No 94
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.19 E-value=0.43 Score=51.22 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=86.3
Q ss_pred CCcEEecCCch---hHHHHHHHHHHHHhH------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCC
Q psy14495 162 KIPVFHDDQHG---TAIIVGSAILNGLKL------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPL 220 (766)
Q Consensus 162 ~~~~fnDD~qG---Ta~v~lA~ll~al~~------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~ 220 (766)
+|++.|---.. +|=-+++.+|+..|. .+..+...+|.|+|.|..|-.+|+.+...|++
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~- 171 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAK- 171 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCE-
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHCCCE-
Confidence 68888854333 444578888887762 23568889999999999999999999999975
Q ss_pred ccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 221 QNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 221 ~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
++.+|+.. + ...+ .++.. ..++.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|.-
T Consensus 172 --V~~~d~~~-------~--~~~~-~~~~~--~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg 237 (333)
T 1j4a_A 172 --VITYDIFR-------N--PELE-KKGYY--VDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRG 237 (333)
T ss_dssp --EEEECSSC-------C--HHHH-HTTCB--CSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred --EEEECCCc-------c--hhHH-hhCee--cCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCC
Confidence 88888732 1 1111 22221 23799999999987633 2 2467889999999999888888764
No 95
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=94.08 E-value=0.16 Score=54.60 Aligned_cols=148 Identities=11% Similarity=0.160 Sum_probs=99.6
Q ss_pred HhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhH------------------hCC
Q psy14495 132 SLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKL------------------VKK 190 (766)
Q Consensus 132 ~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~------------------~~~ 190 (766)
...|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++.+|+..|. .+.
T Consensus 57 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~ 133 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDYL-P-LKALQA-AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTS 133 (324)
T ss_dssp STTCCCCEEECSSSCCTTS-C-HHHHHH-TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCC
T ss_pred hhCCCceEEEECCcccccc-C-HHHHHH-CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCc
Confidence 3446554454444443331 1 233333 3688888653 33444577788877653 266
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL- 269 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~- 269 (766)
.|.+.+|.|+|.|..|-.+|+.+...|+. ++.+|+..- ..+.+ .......+|.|+++.+|+++=.
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~~---V~~~dr~~~----~~~~~-------~~~~~~~~l~ell~~aDvV~l~l 199 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGMH---VIGVNTTGH----PADHF-------HETVAFTATADALATANFIVNAL 199 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCC----CCTTC-------SEEEEGGGCHHHHHHCSEEEECC
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCCE---EEEECCCcc----hhHhH-------hhccccCCHHHHHhhCCEEEEcC
Confidence 79999999999999999999999999985 888887531 10111 1111234699999999987632
Q ss_pred C----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 270 S----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 270 S----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
. +.+.++++.+..|.+..++.=.|.-.
T Consensus 200 Plt~~t~~li~~~~l~~mk~gailIN~aRG~ 230 (324)
T 3evt_A 200 PLTPTTHHLFSTELFQQTKQQPMLINIGRGP 230 (324)
T ss_dssp CCCGGGTTCBSHHHHHTCCSCCEEEECSCGG
T ss_pred CCchHHHHhcCHHHHhcCCCCCEEEEcCCCh
Confidence 1 25789999999999999999888643
No 96
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=94.06 E-value=0.32 Score=52.60 Aligned_cols=147 Identities=16% Similarity=0.055 Sum_probs=96.0
Q ss_pred CCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhHh-----------------------
Q psy14495 135 PTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKLV----------------------- 188 (766)
Q Consensus 135 p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~~----------------------- 188 (766)
|+...|+.-..+..|- . ++..++ .+|+|.|-.- +.+|=-+++.+|+..|..
T Consensus 84 ~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~ 160 (347)
T 1mx3_A 84 KALRIIVRIGSGFDNI-D-IKSAGD-LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVA 160 (347)
T ss_dssp SSCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHT
T ss_pred CCCCEEEEcccccCcc-c-HHHHHh-CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccc
Confidence 5554455555554442 1 122233 3677777432 334555777777776621
Q ss_pred -C-CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEE
Q psy14495 189 -K-KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIF 266 (766)
Q Consensus 189 -~-~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vl 266 (766)
| ..+...+|.|+|.|..|-.+|+.+...|+. ++.+|++- .. . ..+ .+- .....+|.|+++.+|++
T Consensus 161 ~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~---V~~~d~~~----~~--~--~~~-~~g-~~~~~~l~ell~~aDvV 227 (347)
T 1mx3_A 161 SGAARIRGETLGIIGLGRVGQAVALRAKAFGFN---VLFYDPYL----SD--G--VER-ALG-LQRVSTLQDLLFHSDCV 227 (347)
T ss_dssp TTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEECTTS----CT--T--HHH-HHT-CEECSSHHHHHHHCSEE
T ss_pred cCccCCCCCEEEEEeECHHHHHHHHHHHHCCCE---EEEECCCc----ch--h--hHh-hcC-CeecCCHHHHHhcCCEE
Confidence 1 468899999999999999999999999975 88888631 11 1 111 110 01124799999999987
Q ss_pred Eec-C----CCCCCCHHHHHhhccCcEEEeccCCCC
Q psy14495 267 LGL-S----VSGVLKKEMVLQMAKNPIILALANPLP 297 (766)
Q Consensus 267 iG~-S----~~g~ft~evv~~M~~~PiIfaLsNPt~ 297 (766)
+=. . +.+.++++.++.|.+..++.-.|.=..
T Consensus 228 ~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~ 263 (347)
T 1mx3_A 228 TLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGL 263 (347)
T ss_dssp EECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTS
T ss_pred EEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChH
Confidence 633 2 246899999999999999998887543
No 97
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=93.95 E-value=0.55 Score=49.76 Aligned_cols=115 Identities=14% Similarity=0.140 Sum_probs=85.5
Q ss_pred CCcEEec-CCch--hHHHHHHHHHHHHhHh-----------------CCcCCCceEEEECcchhhHHHHHHHHHcCCCCc
Q psy14495 162 KIPVFHD-DQHG--TAIIVGSAILNGLKLV-----------------KKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQ 221 (766)
Q Consensus 162 ~~~~fnD-D~qG--Ta~v~lA~ll~al~~~-----------------~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~ 221 (766)
+|++.|- +... +|=-+++.+|+..|.. ...+...++.|+|.|..|-.+|+.+...|++
T Consensus 72 gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~-- 149 (303)
T 1qp8_A 72 HVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQ-- 149 (303)
T ss_dssp TSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCE--
T ss_pred CCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHCCCE--
Confidence 6888884 3333 3335788888887642 2368899999999999999999999999975
Q ss_pred cEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecC-----CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 222 NIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLS-----VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 222 ~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S-----~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
++.+|+..- . . ......+|.|+++.+|+++=.- +.+.++++.++.|.+..++.=.|.
T Consensus 150 -V~~~dr~~~-----~-~---------~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 150 -VRGFSRTPK-----E-G---------PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp -EEEECSSCC-----C-S---------SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred -EEEECCCcc-----c-c---------CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 888887532 0 0 0112357999999999876431 246789999999999999998887
No 98
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.92 E-value=0.1 Score=54.61 Aligned_cols=95 Identities=20% Similarity=0.200 Sum_probs=65.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
..||.|+|+|..|.+++..|.+.|.+.++++++|++- +.+...+..|-- .-..++.|+++++|++| ++.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------~~~~~l~~~~gi-~~~~~~~~~~~~aDvVi-lav~p 73 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------DKLDFFKEKCGV-HTTQDNRQGALNADVVV-LAVKP 73 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------HHHHHHHHTTCC-EEESCHHHHHSSCSEEE-ECSCG
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------HHHHHHHHHcCC-EEeCChHHHHhcCCeEE-EEeCH
Confidence 4689999999999999999999998777899998731 123333322210 11357899999999876 44433
Q ss_pred CCCHHHHHhhc-----cCcEEEeccCCCC
Q psy14495 274 VLKKEMVLQMA-----KNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~~M~-----~~PiIfaLsNPt~ 297 (766)
...+++++.+. ++.+|...++..+
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 34566666554 4558887777765
No 99
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=93.84 E-value=0.23 Score=53.06 Aligned_cols=147 Identities=13% Similarity=0.215 Sum_probs=99.2
Q ss_pred CCccccccccCCCCchHH-HHH-H-HhhcCCCcEEecCC----chhHHHHHHHHHHHHhH----------------hCCc
Q psy14495 135 PTFGGINLEDIKAPECFY-IEK-K-LRNHMKIPVFHDDQ----HGTAIIVGSAILNGLKL----------------VKKK 191 (766)
Q Consensus 135 p~~g~i~~ED~~~~~af~-il~-~-~~~~~~~~~fnDD~----qGTa~v~lA~ll~al~~----------------~~~~ 191 (766)
|+.-.|+.--.+-.|-.. +.. . ... .++|+.|--- +.+|=-+++.+|+..|. .+..
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~-~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~ 136 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLD-ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYT 136 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSC-TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCC
T ss_pred CCceEEEECCEecccccchhhhhhhhhc-CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCC
Confidence 666556555555443212 221 0 122 3688887422 45666788888888874 2567
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S 270 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S 270 (766)
+.+.+|.|+|.|..|..+|+.+...|+. ++.+|+..- ..+... ......+|.|+++.+|+++=. .
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~G~~---V~~~dr~~~----~~~~~~-------~~~~~~~l~ell~~aDiV~l~~P 202 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAWGFP---LRCWSRSRK----SWPGVE-------SYVGREELRAFLNQTRVLINLLP 202 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCC----CCTTCE-------EEESHHHHHHHHHTCSEEEECCC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEEcCCch----hhhhhh-------hhcccCCHHHHHhhCCEEEEecC
Confidence 8999999999999999999999999986 888887431 101111 111124699999999987633 1
Q ss_pred ----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 271 ----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 271 ----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
+.+.++++.++.|.+..++.=.|.-.
T Consensus 203 lt~~t~~li~~~~l~~mk~gailIN~aRG~ 232 (315)
T 3pp8_A 203 NTAQTVGIINSELLDQLPDGAYVLNLARGV 232 (315)
T ss_dssp CCGGGTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred CchhhhhhccHHHHhhCCCCCEEEECCCCh
Confidence 25789999999999999998888644
No 100
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.75 E-value=0.36 Score=53.95 Aligned_cols=119 Identities=13% Similarity=0.165 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCC-cHH-------
Q psy14495 172 GTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELM-DSN------- 243 (766)
Q Consensus 172 GTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l-~~~------- 243 (766)
-||-=+.-++-.+++..|.+++..||+|.|.|..|...+++|.+.|.+ =+-+.|++|.|+... .+ ++.
T Consensus 208 aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~Gak--vVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 208 ATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAK--AVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCE--EEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 466666667778888899999999999999999999999999999976 344789999888753 35 221
Q ss_pred -HH-------Hhc-----cccCCCCHHHHhccCcEEEecCCCCCCCHHHHHhhcc--CcEEEeccC-CC
Q psy14495 244 -KA-------RFI-----KDTTARTLSDIIPNADIFLGLSVSGVLKKEMVLQMAK--NPIILALAN-PL 296 (766)
Q Consensus 244 -k~-------~~a-----~~~~~~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~--~PiIfaLsN-Pt 296 (766)
|. .|. +..+...+.+ -.+|+|+-+..++.+|++-.+.+.. -.+|.-=+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i~~~e~~~--~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFFPGEKPWG--QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEEETCCGGG--SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEeCchhhhc--CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcC
Confidence 11 111 1001112221 1469999999889999999998864 467777777 54
No 101
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.56 E-value=0.31 Score=52.40 Aligned_cols=120 Identities=15% Similarity=0.127 Sum_probs=88.1
Q ss_pred CCCcEEecCCch---hHHHHHHHHHHHHhH-------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCC
Q psy14495 161 MKIPVFHDDQHG---TAIIVGSAILNGLKL-------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGF 218 (766)
Q Consensus 161 ~~~~~fnDD~qG---Ta~v~lA~ll~al~~-------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~ 218 (766)
.+|++.|---.. +|=-+++.+|+..|. .+..+.+.++.|+|.|..|-.+|+.+...|+
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~ 169 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGA 169 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHCCC
Confidence 378888854333 444578888887661 3467899999999999999999999999997
Q ss_pred CCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEecc
Q psy14495 219 PLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALA 293 (766)
Q Consensus 219 ~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLs 293 (766)
. ++.+|+.. .. ... .++. ..+|.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|
T Consensus 170 ~---V~~~d~~~----~~--~~~----~~~~---~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 170 K---VIAYDPYP----MK--GDH----PDFD---YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp E---EEEECSSC----CS--SCC----TTCE---ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred E---EEEECCCc----ch--hhH----hccc---cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 6 88888743 11 111 1122 23799999999987643 1 24689999999999999998888
Q ss_pred CCC
Q psy14495 294 NPL 296 (766)
Q Consensus 294 NPt 296 (766)
.-.
T Consensus 234 rg~ 236 (333)
T 1dxy_A 234 RPN 236 (333)
T ss_dssp CTT
T ss_pred CCc
Confidence 643
No 102
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=93.54 E-value=0.47 Score=51.66 Aligned_cols=149 Identities=13% Similarity=0.170 Sum_probs=100.8
Q ss_pred CCCccccccccCCCCchHHHHHHHhhc-CCCcEEecCC---chhHHHHHHHHHHHHhH--------------------hC
Q psy14495 134 EPTFGGINLEDIKAPECFYIEKKLRNH-MKIPVFHDDQ---HGTAIIVGSAILNGLKL--------------------VK 189 (766)
Q Consensus 134 ~p~~g~i~~ED~~~~~af~il~~~~~~-~~~~~fnDD~---qGTa~v~lA~ll~al~~--------------------~~ 189 (766)
.|+.-.|+.-..+..|-- ++..+++ .+|++.|--- +.+|=-+++.+|+..|. .+
T Consensus 82 ~~~Lk~I~~~~~G~d~id--~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 82 AKKLKLVVVAGVGSDHID--LDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp CTTCCEEEESSSCCTTBC--HHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred CCCCeEEEECCccccccc--HHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 466656776666666531 1222221 1588888532 33455578888888772 36
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~ 269 (766)
..|.+.+|.|+|.|..|..+|+.+...|++ +++.+|+... .....+..=++ ...+|.|+++.+|+++=.
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~--~V~~~d~~~~-------~~~~~~~~g~~--~~~~l~ell~~aDvV~l~ 228 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPK--ELLYYDYQAL-------PKDAEEKVGAR--RVENIEELVAQADIVTVN 228 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCS--EEEEECSSCC-------CHHHHHHTTEE--ECSSHHHHHHTCSEEEEC
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCc--EEEEECCCcc-------chhHHHhcCcE--ecCCHHHHHhcCCEEEEC
Confidence 689999999999999999999999998864 4888886321 11111111011 124799999999987643
Q ss_pred C-----CCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 270 S-----VSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 270 S-----~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
- +.+.++++.+..|.+..++.-.|.-
T Consensus 229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~arG 259 (364)
T 2j6i_A 229 APLHAGTKGLINKELLSKFKKGAWLVNTARG 259 (364)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred CCCChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence 2 1368999999999999999988874
No 103
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=93.44 E-value=0.52 Score=50.58 Aligned_cols=142 Identities=13% Similarity=0.148 Sum_probs=90.5
Q ss_pred CCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHHHHHHHHhH--------------------hC--
Q psy14495 135 PTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGSAILNGLKL--------------------VK-- 189 (766)
Q Consensus 135 p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA~ll~al~~--------------------~~-- 189 (766)
|+.-.|+.--.+..|- . ++..++ .+|++.|--- +.+|=-+++.+|+..|. .|
T Consensus 63 ~~Lk~I~~~~~G~d~i-d-~~~~~~-~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~ 139 (333)
T 2d0i_A 63 ERLKVISCHSAGYDNI-D-LEEATK-RGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFK 139 (333)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSC
T ss_pred CCceEEEECCcccccc-c-HHHHHh-CCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCc
Confidence 4444444444444432 1 222233 2577777432 33444567777776653 24
Q ss_pred --CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEE
Q psy14495 190 --KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFL 267 (766)
Q Consensus 190 --~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vli 267 (766)
..|.+.+|.|+|.|..|..+|+.+...|+. ++.+|+.. +. ...+..-++ ..+|.|+++.+|+++
T Consensus 140 ~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~---V~~~d~~~-------~~-~~~~~~g~~---~~~l~e~l~~aDiVi 205 (333)
T 2d0i_A 140 RIESLYGKKVGILGMGAIGKAIARRLIPFGVK---LYYWSRHR-------KV-NVEKELKAR---YMDIDELLEKSDIVI 205 (333)
T ss_dssp CCCCSTTCEEEEECCSHHHHHHHHHHGGGTCE---EEEECSSC-------CH-HHHHHHTEE---ECCHHHHHHHCSEEE
T ss_pred ccCCCCcCEEEEEccCHHHHHHHHHHHHCCCE---EEEECCCc-------ch-hhhhhcCce---ecCHHHHHhhCCEEE
Confidence 679999999999999999999999999964 88888742 11 111111111 237999999999876
Q ss_pred ec-CC----CCCCCHHHHHhhccCcEEEeccC
Q psy14495 268 GL-SV----SGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 268 G~-S~----~g~ft~evv~~M~~~PiIfaLsN 294 (766)
=+ .. .+.++++.++.|.+. ++.-.|.
T Consensus 206 l~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 206 LALPLTRDTYHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp ECCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred EcCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence 33 21 357888899999988 8877774
No 104
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.42 E-value=0.11 Score=55.66 Aligned_cols=149 Identities=16% Similarity=0.169 Sum_probs=87.7
Q ss_pred cCCC--ccccCCCCCCHHHHHHHHHHhCCCcccc-----------ccccCCCCchHHHHH----HHhhcCCCcEEecCCc
Q psy14495 109 AGID--VFDLEINETDPDKLCDIIFSLEPTFGGI-----------NLEDIKAPECFYIEK----KLRNHMKIPVFHDDQH 171 (766)
Q Consensus 109 ~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i-----------~~ED~~~~~af~il~----~~~~~~~~~~fnDD~q 171 (766)
-|+| ..++.+..++.+++++.++. ++|.++ .+=|--++.|..+=- ..++ -.+.=+|-|
T Consensus 63 ~Gl~~~Y~~~~v~~~~l~~~~~~l~~--~~~~G~nVTiP~K~~v~~~lD~ls~~A~~iGAVNTi~~~~-g~l~G~NTD-- 137 (315)
T 3tnl_A 63 LGLDYVYLAFEVGDKELKDVVQGFRA--MNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDD-GVLTGHITD-- 137 (315)
T ss_dssp HTCCEEEEEEECCHHHHHHHHHHHHH--TTCCEEEECTTSTTTGGGGCSEECHHHHHHTCCSEEEEET-TEEEEECCH--
T ss_pred cCCCcEEEEEecCHHHHHHHHHHHhc--CCCCEEEEcCCChHHHHHHHHhcCHHHHHhCccceEEecC-CEEEEeCCC--
Confidence 4788 34555555566677776665 566542 232222233322100 0011 112235555
Q ss_pred hhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-
Q psy14495 172 GTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD- 250 (766)
Q Consensus 172 GTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~- 250 (766)
-.|++.+|+..+.++++.+++|+|||.+|-+++..|.+.|.+ +|+++++++ .+.+........+...
T Consensus 138 ------~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~--~V~i~nR~~----~~~~~a~~la~~~~~~~ 205 (315)
T 3tnl_A 138 ------GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVK--EISIFNRKD----DFYANAEKTVEKINSKT 205 (315)
T ss_dssp ------HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCS--EEEEEECSS----TTHHHHHHHHHHHHHHS
T ss_pred ------HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCC--EEEEEECCC----chHHHHHHHHHHhhhhc
Confidence 356788888889999999999999999999999999999986 799998852 1001111111122111
Q ss_pred ------cCC---CCHHHHhccCcEEEecCCCCC
Q psy14495 251 ------TTA---RTLSDIIPNADIFLGLSVSGV 274 (766)
Q Consensus 251 ------~~~---~~L~e~i~~~~vliG~S~~g~ 274 (766)
... .+|.+.++.+|++|-+...|.
T Consensus 206 ~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm 238 (315)
T 3tnl_A 206 DCKAQLFDIEDHEQLRKEIAESVIFTNATGVGM 238 (315)
T ss_dssp SCEEEEEETTCHHHHHHHHHTCSEEEECSSTTS
T ss_pred CCceEEeccchHHHHHhhhcCCCEEEECccCCC
Confidence 111 236677888999997654443
No 105
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=93.35 E-value=0.83 Score=49.08 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=85.1
Q ss_pred CCcEEecCCc---hhHHHHHHHHHHHHhH-------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCC
Q psy14495 162 KIPVFHDDQH---GTAIIVGSAILNGLKL-------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFP 219 (766)
Q Consensus 162 ~~~~fnDD~q---GTa~v~lA~ll~al~~-------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~ 219 (766)
+|++.|-.-. .+|=-+++.+|+..|. .+..|.+.++-|+|.|.-|-.+|+.+...|+.
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~ 166 (334)
T 3kb6_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMK 166 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred CCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCce
Confidence 6888886433 3444567777776553 24568889999999999999999999999987
Q ss_pred CccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-----CCCCCCCHHHHHhhccCcEEEeccC
Q psy14495 220 LQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-----SVSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 220 ~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-----S~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
++.+|+.. + +..+...+ ...+|.|.++.+|++.=. ++.+.|+++.++.|.+..++.=.|.
T Consensus 167 ---v~~~d~~~-----~----~~~~~~~~---~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aR 231 (334)
T 3kb6_A 167 ---VLCYDVVK-----R----EDLKEKGC---VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTAR 231 (334)
T ss_dssp ---EEEECSSC-----C----HHHHHTTC---EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred ---eeecCCcc-----c----hhhhhcCc---eecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCc
Confidence 77788621 1 12222222 235799999999987532 1368999999999999998886654
No 106
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=93.23 E-value=0.79 Score=48.89 Aligned_cols=120 Identities=16% Similarity=0.134 Sum_probs=85.5
Q ss_pred CCcEEecCC---chhHHHHHHHHHHHHhH---------------------hCCcCCCceEEEECcchhhHHHHHHHHHcC
Q psy14495 162 KIPVFHDDQ---HGTAIIVGSAILNGLKL---------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLG 217 (766)
Q Consensus 162 ~~~~fnDD~---qGTa~v~lA~ll~al~~---------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g 217 (766)
+|++.|--- +.+|=-+++.+|+..|. .+..+...+|.|+|.|..|-.+|+.+...|
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G 169 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFD 169 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTT
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 688888643 33445578888888764 234688999999999999999999999888
Q ss_pred CCCccEEEEcC-CccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEe
Q psy14495 218 FPLQNIFVTDL-AGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILA 291 (766)
Q Consensus 218 ~~~~~i~~~D~-~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfa 291 (766)
+. ++.+|+ .. +. ...+..-++ -..++.|+++.+|+++=. . +.+.++++.++.|.+.-++.-
T Consensus 170 ~~---V~~~d~~~~-------~~-~~~~~~g~~--~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn 236 (320)
T 1gdh_A 170 MD---IDYFDTHRA-------SS-SDEASYQAT--FHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVN 236 (320)
T ss_dssp CE---EEEECSSCC-------CH-HHHHHHTCE--ECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEE
T ss_pred CE---EEEECCCCc-------Ch-hhhhhcCcE--EcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEE
Confidence 64 888887 32 11 111111111 123799999999987632 2 136788899999999888888
Q ss_pred ccC
Q psy14495 292 LAN 294 (766)
Q Consensus 292 LsN 294 (766)
.|.
T Consensus 237 ~ar 239 (320)
T 1gdh_A 237 TAR 239 (320)
T ss_dssp CSC
T ss_pred CCC
Confidence 876
No 107
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.97 E-value=0.45 Score=51.12 Aligned_cols=174 Identities=9% Similarity=0.034 Sum_probs=110.1
Q ss_pred HHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecC-C--chhHHHHHH
Q psy14495 103 VLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDD-Q--HGTAIIVGS 179 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD-~--qGTa~v~lA 179 (766)
.+...+.+.|++=+.....-..++++.. |+.-.|+.--.+..|- . ++..++ .+|++.|-- . +.+|=-+++
T Consensus 38 ~~~~~~~~~d~~i~~~~~~i~~~~l~~~----~~Lk~I~~~~~G~d~i-d-~~~~~~-~gI~v~n~~~~~~~~vAE~~~~ 110 (330)
T 4e5n_A 38 EILRRCRDAQAMMAFMPDRVDADFLQAC----PELRVIGCALKGFDNF-D-VDACTA-RGVWLTFVPDLLTVPTAELAIG 110 (330)
T ss_dssp HHHHHHTTCSEEEECTTCCBCHHHHHHC----TTCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCSSTTHHHHHHHHHH
T ss_pred HHHHHhCCCeEEEEeCCCCCCHHHHhhC----CCCcEEEECCCccccc-C-HHHHHh-cCcEEEeCCCCCchHHHHHHHH
Confidence 3445556666433322222234555442 5554444444443331 1 122333 378888853 2 334556788
Q ss_pred HHHHHHhH--------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCC
Q psy14495 180 AILNGLKL--------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSEL 239 (766)
Q Consensus 180 ~ll~al~~--------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~ 239 (766)
-+|+..|. .|..|.+.++.|+|.|..|-.+|+.+...|+. ++.+|+... .
T Consensus 111 ~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~---V~~~d~~~~-------~ 180 (330)
T 4e5n_A 111 LAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGAT---LQYHEAKAL-------D 180 (330)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCE---EEEECSSCC-------C
T ss_pred HHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCE---EEEECCCCC-------c
Confidence 88877763 24568899999999999999999999999975 888887421 1
Q ss_pred CcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 240 MDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 240 l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
....+..-+ ...+|.|+++.+|+++=. . +.+.++++.++.|.+..++.-.|.-.
T Consensus 181 ~~~~~~~g~---~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~ 239 (330)
T 4e5n_A 181 TQTEQRLGL---RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGS 239 (330)
T ss_dssp HHHHHHHTE---EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred HhHHHhcCc---eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence 111111111 224799999999987643 2 24689999999999999999888743
No 108
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.96 E-value=0.45 Score=50.21 Aligned_cols=150 Identities=13% Similarity=0.139 Sum_probs=93.7
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~ 269 (766)
..|.+.+|.|+|.|..|..+|+.+...|+. ++.+|+.. .. ... ++ ...+|.|+++.+|+++=.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~---V~~~dr~~----~~---~~~-----~~--~~~~l~ell~~aDiV~l~ 180 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMR---VIAYTRSS----VD---QNV-----DV--ISESPADLFRQSDFVLIA 180 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSC----CC---TTC-----SE--ECSSHHHHHHHCSEEEEC
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcE---EEEEeccc----cc---ccc-----cc--ccCChHHHhhccCeEEEE
Confidence 458899999999999999999999999986 88888853 11 111 11 235799999999987632
Q ss_pred -C----CCCCCCHHHHHhhccCcEEEeccCCCCccCHh--hHhcccCcEEEE-c---C-CCCCc-ccccccccccchhhh
Q psy14495 270 -S----VSGVLKKEMVLQMAKNPIILALANPLPEILPE--DIKSVRNDAIIA-T---G-RSDYP-NQVNNVLCFPYIFRG 336 (766)
Q Consensus 270 -S----~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe--~a~~~~~~ai~a-t---G-~~~~p-~Q~NN~~~FPgi~~g 336 (766)
. +.+.++++.++.|.+..++.=.|.-.+.-+.+ +|.+. ++.-.| . + .+..| -+..|+++-|=++-|
T Consensus 181 ~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~-g~i~ga~lDV~~~EP~~pL~~~~nvilTPHiag~ 259 (290)
T 3gvx_A 181 IPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKE-RSDVWYLSDVWWNEPEITETNLRNAILSPHVAGG 259 (290)
T ss_dssp CCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHH-CTTCEEEESCCTTTTSCCSCCCSSEEECCSCSSC
T ss_pred eeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhh-ccceEEeeccccCCcccchhhhhhhhcCccccCC
Confidence 2 14689999999999999999888644322221 22222 221111 1 1 11111 245577777775311
Q ss_pred hhcccCCcCCHHHHHHHHHHHHhcc
Q psy14495 337 ALDSGATTITREMEIAAVHAIADLA 361 (766)
Q Consensus 337 ~l~~~a~~i~~~m~~aAa~aLA~l~ 361 (766)
....-.+.|...+++.+....
T Consensus 260 ----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 260 ----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp ----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ----ccchHHHHHHHHHHHHHHhhh
Confidence 123345666666666665543
No 109
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=92.78 E-value=0.5 Score=51.04 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=86.5
Q ss_pred CCCcEEecCC---chhHHHHHHHHHHHHhH--------------------hCCcCCCceEEEECcchhhHHHHHHHHHcC
Q psy14495 161 MKIPVFHDDQ---HGTAIIVGSAILNGLKL--------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLG 217 (766)
Q Consensus 161 ~~~~~fnDD~---qGTa~v~lA~ll~al~~--------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g 217 (766)
.+|++.|--- +.+|=-+++-+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+...|
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G 171 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAMG 171 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhCC
Confidence 3688888633 23455678888877651 234678999999999999999999999999
Q ss_pred CCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEec
Q psy14495 218 FPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 218 ~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaL 292 (766)
+. ++.+|+..- +.. .... ...+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=.
T Consensus 172 ~~---V~~~d~~~~------~~~----~~~~---~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 235 (343)
T 2yq5_A 172 AK---VIAYDVAYN------PEF----EPFL---TYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINC 235 (343)
T ss_dssp CE---EEEECSSCC------GGG----TTTC---EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred CE---EEEECCChh------hhh----hccc---cccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEEC
Confidence 85 888888421 000 0111 123799999999987643 2 2578999999999999999988
Q ss_pred cCCC
Q psy14495 293 ANPL 296 (766)
Q Consensus 293 sNPt 296 (766)
|.-.
T Consensus 236 aRg~ 239 (343)
T 2yq5_A 236 ARGE 239 (343)
T ss_dssp SCGG
T ss_pred CCCh
Confidence 7643
No 110
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.77 E-value=0.33 Score=52.03 Aligned_cols=121 Identities=11% Similarity=0.135 Sum_probs=86.2
Q ss_pred CCcEEecC-Cc--hhHHHHHHHHHHHHhH----------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCcc
Q psy14495 162 KIPVFHDD-QH--GTAIIVGSAILNGLKL----------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQN 222 (766)
Q Consensus 162 ~~~~fnDD-~q--GTa~v~lA~ll~al~~----------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~ 222 (766)
+|++.|-- .. .+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+...|+.
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~--- 165 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMK--- 165 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTCE---
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCCE---
Confidence 35666532 22 2444567777776663 35679999999999999999999999999985
Q ss_pred EEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccCCC
Q psy14495 223 IFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 223 i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsNPt 296 (766)
++.+|+.. .. ... +.......+|.|+++.+|+++=. . +.+.++++.++.|.+..++.=.|.-.
T Consensus 166 V~~~dr~~----~~---~~~----~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~ 233 (324)
T 3hg7_A 166 VLGVSRSG----RE---RAG----FDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGN 233 (324)
T ss_dssp EEEECSSC----CC---CTT----CSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGG
T ss_pred EEEEcCCh----HH---hhh----hhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCch
Confidence 88888854 11 111 11112345799999999987633 1 25688999999999999999888643
No 111
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.74 E-value=0.093 Score=50.75 Aligned_cols=31 Identities=19% Similarity=0.398 Sum_probs=28.5
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.|+|+|||.||+.+|..|.+.|++ +.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 599999999999999999999987 8999874
No 112
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.69 E-value=0.081 Score=56.00 Aligned_cols=94 Identities=12% Similarity=0.226 Sum_probs=59.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH------hcc-ccC--CCCHHHHhccCcE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR------FIK-DTT--ARTLSDIIPNADI 265 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~------~a~-~~~--~~~L~e~i~~~~v 265 (766)
.||.|+|||+.|.++|..|.+.|+ ..+++++|.+- ++ +...... +.. ... ..++ ++++++|+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d~~~----~~---~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDv 72 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFIDANE----AK---VKADQIDFQDAMANLEAHGNIVINDW-AALADADV 72 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSSH----HH---HHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEcCCH----HH---HHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCE
Confidence 389999999999999999999897 34799999841 11 1111111 110 001 2456 78899998
Q ss_pred EEec-CCCCC------C------------CHHHHHhhc---cCcEEEeccCCCC
Q psy14495 266 FLGL-SVSGV------L------------KKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 266 liG~-S~~g~------f------------t~evv~~M~---~~PiIfaLsNPt~ 297 (766)
+|=+ ..+.. . -+++++.+. ++.+|+-+|||..
T Consensus 73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 6632 22211 1 146666664 4667777999964
No 113
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=92.56 E-value=0.46 Score=51.82 Aligned_cols=121 Identities=16% Similarity=0.093 Sum_probs=85.0
Q ss_pred CCcEEecCC---chhHHHHHHHHHHHHhH---------------------hCCcCCCceEEEECcchhhHHHHHHHHHcC
Q psy14495 162 KIPVFHDDQ---HGTAIIVGSAILNGLKL---------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLG 217 (766)
Q Consensus 162 ~~~~fnDD~---qGTa~v~lA~ll~al~~---------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g 217 (766)
+|++.|--- ..+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...|
T Consensus 120 GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG 199 (365)
T 4hy3_A 120 GIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFR 199 (365)
T ss_dssp CCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSC
T ss_pred CeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCC
Confidence 677777432 33455677777777662 234688999999999999999999999889
Q ss_pred CCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEec
Q psy14495 218 FPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILAL 292 (766)
Q Consensus 218 ~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaL 292 (766)
+. ++.+|+.. .....+..-+ ...+|.|+++.+|+++=. . +.+.++++.+..|.+..++.-.
T Consensus 200 ~~---V~~~d~~~--------~~~~~~~~g~---~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~ 265 (365)
T 4hy3_A 200 AR---IRVFDPWL--------PRSMLEENGV---EPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILL 265 (365)
T ss_dssp CE---EEEECSSS--------CHHHHHHTTC---EECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEEC
T ss_pred CE---EEEECCCC--------CHHHHhhcCe---eeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEEC
Confidence 75 88888631 1111111111 235799999999988732 1 2568999999999999999988
Q ss_pred cCCC
Q psy14495 293 ANPL 296 (766)
Q Consensus 293 sNPt 296 (766)
|.-.
T Consensus 266 aRG~ 269 (365)
T 4hy3_A 266 SRAD 269 (365)
T ss_dssp SCGG
T ss_pred cCCc
Confidence 8643
No 114
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.47 E-value=0.26 Score=51.57 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=62.1
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc-cccCCCCHH
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-KDTTARTLS 257 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-~~~~~~~L~ 257 (766)
.|++.+|+..| +.|++|+|||.+|-+++..|.+.| . +++++++. .+| ..... .+. +.....+|
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~G-~--~v~V~nRt----~~k---a~~la-~~~~~~~~~~~l- 170 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQG-L--QVSVLNRS----SRG---LDFFQ-RLGCDCFMEPPK- 170 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHTT-C--EEEEECSS----CTT---HHHHH-HHTCEEESSCCS-
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHCC-C--EEEEEeCC----HHH---HHHHH-HCCCeEecHHHh-
Confidence 45666776543 789999999999999999999999 5 79999884 222 22222 221 11122222
Q ss_pred HHhccCcEEEecCCCC-----CCCHHHHH-hhccCcEEEecc-CC
Q psy14495 258 DIIPNADIFLGLSVSG-----VLKKEMVL-QMAKNPIILALA-NP 295 (766)
Q Consensus 258 e~i~~~~vliG~S~~g-----~ft~evv~-~M~~~PiIfaLs-NP 295 (766)
..+|++|-+...| .+.++.+. .+.+..+|+=++ ||
T Consensus 171 ---~~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 171 ---SAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp ---SCCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred ---ccCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence 2789999665323 47777555 456677887664 55
No 115
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.38 E-value=0.64 Score=52.50 Aligned_cols=111 Identities=23% Similarity=0.303 Sum_probs=77.9
Q ss_pred HhHhCC--cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcH-----HHHHhccccC---CC
Q psy14495 185 LKLVKK--KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDS-----NKARFIKDTT---AR 254 (766)
Q Consensus 185 l~~~~~--~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~-----~k~~~a~~~~---~~ 254 (766)
++..|. .|+..||+|-|.|..|...|+.|.+.|.+ =+-+.|++|-|+... +++. +|.....-.. ..
T Consensus 233 ~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~Gak--VVavsDs~G~iyd~~--Gid~~~l~~~k~~~g~i~~~~~a~ 308 (501)
T 3mw9_A 233 MSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAK--CITVGESDGSIWNPD--GIDPKELEDFKLQHGTILGFPKAK 308 (501)
T ss_dssp HHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCE--EEEEECSSCEEECTT--CCCHHHHHHHHHHHSSSTTCTTSE
T ss_pred HHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEEcCCceEECCC--CCCHHHHHHHHHhcCCeecccCce
Confidence 345675 48999999999999999999999999976 455899999999754 4443 3322211000 00
Q ss_pred CHH-HHhc-cCcEEEecCCCCCCCHHHHHhhccCcEEEeccCCCCccCHh
Q psy14495 255 TLS-DIIP-NADIFLGLSVSGVLKKEMVLQMAKNPIILALANPLPEILPE 302 (766)
Q Consensus 255 ~L~-e~i~-~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNPt~E~~pe 302 (766)
.+. +... .+|||+-+...+.+|++-+..+ +-.+|.--+|- | +|||
T Consensus 309 ~~~~~il~~~~DIliPcA~~n~I~~~na~~l-~akiV~EgAN~-p-~T~e 355 (501)
T 3mw9_A 309 IYEGSILEVDCDILIPAASEKQLTKSNAPRV-KAKIIAEGANG-P-TTPE 355 (501)
T ss_dssp EECSCGGGSCCSEEEECSSSCCBCTTTGGGC-CCSEEECCSSS-C-BCHH
T ss_pred eeccccccccceEEeeccccCccCHhHHHHc-CceEEEeCCCC-c-CCHH
Confidence 000 2233 3699999998899999988887 46788888883 2 4664
No 116
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.09 E-value=0.38 Score=48.82 Aligned_cols=94 Identities=20% Similarity=0.321 Sum_probs=61.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCC-CCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGF-PLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~-~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.||.|+|+|..|..++..|.+.|. +.++++++|++- +.+...+..+- -.-..++.|+++++|++| ++.+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~-------~~~~~~~~~~g-~~~~~~~~e~~~~aDvVi-lav~~ 73 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT-------ANLKNASEKYG-LTTTTDNNEVAKNADILI-LSIKP 73 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH-------HHHHHHHHHHC-CEECSCHHHHHHHCSEEE-ECSCT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH-------HHHHHHHHHhC-CEEeCChHHHHHhCCEEE-EEeCH
Confidence 489999999999999999999995 556899988731 11222222221 112357899999999876 44444
Q ss_pred CCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 274 VLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
...+++++.+. +..+|...++-.+
T Consensus 74 ~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 74 DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 45567776665 4557777776654
No 117
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.08 E-value=0.24 Score=53.70 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=62.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH-----hccc-------cCCCCHHHHhc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR-----FIKD-------TTARTLSDIIP 261 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~-----~a~~-------~~~~~L~e~i~ 261 (766)
..||.|+|+|+-|.++|..|.+.|.. ++++|++-- .+...+.. |-.. .-..++.|+++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~---V~l~~r~~~-------~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~ 98 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQK---VRLWSYESD-------HVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE 98 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCC---EEEECSCHH-------HHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCe---EEEEeCCHH-------HHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh
Confidence 46899999999999999999998854 888887411 11111111 1100 01257899999
Q ss_pred cCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 262 NADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 262 ~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
++|++| ++.+-.+.+++++.+. +..+|..++|..
T Consensus 99 ~aDvVi-laVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 99 GVTDIL-IVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp TCCEEE-ECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred cCCEEE-ECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 999877 5554446778887776 466888888865
No 118
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.07 E-value=0.16 Score=52.82 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=68.5
Q ss_pred cCCC--ccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCc---hHHHHHHHh------hcCCCcEE-ecC-Cch--h
Q psy14495 109 AGID--VFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPE---CFYIEKKLR------NHMKIPVF-HDD-QHG--T 173 (766)
Q Consensus 109 ~gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~---af~il~~~~------~~~~~~~f-nDD-~qG--T 173 (766)
-|+| ..++.+..++.+++++.++. +.|.+++. .-|+ +++++++.. ...+.-++ +|. ..| |
T Consensus 27 ~gl~~~y~~~~~~~~~l~~~i~~~~~--~~~~G~nV---T~P~K~~v~~~ld~~~~~A~~igavNti~~~~~g~l~g~NT 101 (272)
T 1p77_A 27 THQTMEYIAKLGDLDAFEQQLLAFFE--EGAKGCNI---TSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNT 101 (272)
T ss_dssp TTCCEEEEEEECCTTTHHHHHHHHHH--TTCCEEEE---CTTCHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECC
T ss_pred CCcCeEEEEEEcCHHHHHHHHHHHHh--CCCCEEEE---CcCCHHHHHHHHhhcCHHHHHhCCceEEEEccCCEEEEecC
Confidence 3677 34555556677777777663 56655321 2231 233322211 11221122 221 112 2
Q ss_pred HHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 174 AIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 174 a~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
- -.|++.+|+..+.+++..+++|+|||.+|.+++..|.+.| . +++++|+.
T Consensus 102 D---~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G-~--~v~v~~R~ 151 (272)
T 1p77_A 102 D---GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-Q--NIVLANRT 151 (272)
T ss_dssp H---HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-C--EEEEEESS
T ss_pred C---HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCC-C--EEEEEECC
Confidence 1 4677788888888899999999999999999999999999 4 79999874
No 119
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=91.94 E-value=0.28 Score=52.27 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=62.2
Q ss_pred eEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc------cC---CCCHHHHhccCcE
Q psy14495 196 KLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD------TT---ARTLSDIIPNADI 265 (766)
Q Consensus 196 ~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~------~~---~~~L~e~i~~~~v 265 (766)
||+|+|| |..|..++..|...|+ ...++++|.+-. ......+.+. .. ..++.++++++|+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~~---------~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAHT---------PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSSH---------HHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSE
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCcc---------HHHHHHHhccCcCceEEEecCCCCHHHHhCCCCE
Confidence 8999998 9999999999988776 247999998640 1111122221 01 1368899999998
Q ss_pred EEec---CC-CC-----------CCCHHHHHhhc---cCcEEEeccCCCCccCH
Q psy14495 266 FLGL---SV-SG-----------VLKKEMVLQMA---KNPIILALANPLPEILP 301 (766)
Q Consensus 266 liG~---S~-~g-----------~ft~evv~~M~---~~PiIfaLsNPt~E~~p 301 (766)
++=+ .. +| ...+++++.|. ++.+|+-.|||.--.++
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~ 125 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIP 125 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHH
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHH
Confidence 6633 22 33 12344555544 57788888999765554
No 120
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.83 E-value=0.57 Score=47.59 Aligned_cols=88 Identities=14% Similarity=0.179 Sum_probs=63.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCC-CCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGF-PLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS 272 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~-~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~ 272 (766)
..||.|+|+|..|..++..|.+.|. ...+++++|++- ++ + .-.-..++.|+++.+|++| ++.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~----~~----------~-g~~~~~~~~~~~~~~D~vi-~~v~ 67 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK----KN----------T-TLNYMSSNEELARHCDIIV-CAVK 67 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC----CS----------S-SSEECSCHHHHHHHCSEEE-ECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc----cc----------C-ceEEeCCHHHHHhcCCEEE-EEeC
Confidence 4589999999999999999999884 224799988741 11 1 0011246888899999876 4554
Q ss_pred CCCCHHHHHhhc---cCcEEEeccCCCC
Q psy14495 273 GVLKKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 273 g~ft~evv~~M~---~~PiIfaLsNPt~ 297 (766)
....+++++.+. +..+|+.++|..+
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 456778888776 4567888888764
No 121
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.71 E-value=1.2 Score=50.76 Aligned_cols=171 Identities=15% Similarity=0.109 Sum_probs=108.5
Q ss_pred HHHhhhcCCCccccCCCCCCHHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEecCC---chhHHHHHH
Q psy14495 103 VLFKKFAGIDVFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFHDDQ---HGTAIIVGS 179 (766)
Q Consensus 103 ~ly~~~~gi~~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fnDD~---qGTa~v~lA 179 (766)
.+...+.+.|++=+.-.+.-..++++. .|+.-.|+.--.+..|- . ++..++ .+|+|.|--- ..+|=-+++
T Consensus 37 ~~~~~~~~~d~li~~~~~~~~~~~l~~----~~~Lk~i~~~~~G~d~i-d-~~~~~~-~gi~v~n~p~~~~~~vAE~~~~ 109 (529)
T 1ygy_A 37 KLLAAVPEADALLVRSATTVDAEVLAA----APKLKIVARAGVGLDNV-D-VDAATA-RGVLVVNAPTSNIHSAAEHALA 109 (529)
T ss_dssp HHHHHGGGCSEEEECSSSCBCHHHHHT----CTTCCEEEESSSCCTTB-C-HHHHHH-TTCEEECCTTSSHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEcCCCCCCHHHHhh----CCCCcEEEECCcCcCcc-C-HhHHHh-CCeEEEECCCcchHHHHHHHHH
Confidence 444556666654222222223444443 45554565555555542 1 222333 3788888643 334555788
Q ss_pred HHHHHHhH------------------hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCc
Q psy14495 180 AILNGLKL------------------VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMD 241 (766)
Q Consensus 180 ~ll~al~~------------------~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~ 241 (766)
-+|+..|. .|..|...++.|+|.|..|-.+|+.|...|+. ++.+|+.- ...
T Consensus 110 ~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~---V~~~d~~~--------~~~ 178 (529)
T 1ygy_A 110 LLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAY---VVAYDPYV--------SPA 178 (529)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEECTTS--------CHH
T ss_pred HHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhCCCE---EEEECCCC--------Chh
Confidence 88887763 24678999999999999999999999999974 88888731 111
Q ss_pred HHHHHhccccCCCCHHHHhccCcEEEec-C----CCCCCCHHHHHhhccCcEEEeccC
Q psy14495 242 SNKARFIKDTTARTLSDIIPNADIFLGL-S----VSGVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 242 ~~k~~~a~~~~~~~L~e~i~~~~vliG~-S----~~g~ft~evv~~M~~~PiIfaLsN 294 (766)
..+..-+. ..++.|+++.+|+++=+ . ..+.++++.+..|.+..+|.=.|.
T Consensus 179 ~a~~~g~~---~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~ar 233 (529)
T 1ygy_A 179 RAAQLGIE---LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR 233 (529)
T ss_dssp HHHHHTCE---ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHhcCcE---EcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCC
Confidence 11111111 12799999999987633 1 246788889999999999998884
No 122
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.53 E-value=0.26 Score=51.13 Aligned_cols=111 Identities=19% Similarity=0.219 Sum_probs=68.3
Q ss_pred CCC--ccccCCCCCCHHHHHHHHHHhCCCccccccccCCCC---chHHHHHH------HhhcCCCcEE-ecC-CchhHHH
Q psy14495 110 GID--VFDLEINETDPDKLCDIIFSLEPTFGGINLEDIKAP---ECFYIEKK------LRNHMKIPVF-HDD-QHGTAII 176 (766)
Q Consensus 110 gi~--~l~v~~~~~~~~~~v~~v~~~~p~~g~i~~ED~~~~---~af~il~~------~~~~~~~~~f-nDD-~qGTa~v 176 (766)
|++ ..++.+..++..++++.++ .++|.+++. .-| .+++++++ --...+.-++ +|. ..|.= .
T Consensus 28 g~~~~y~~~~~~~~~l~~~i~~l~--~~~~~G~nV---T~P~K~~~~~~ld~~~~~A~~igavNti~~~~~g~l~G~n-t 101 (271)
T 1nyt_A 28 NIEHPYGRVLAPINDFINTLNAFF--SAGGKGANV---TVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDN-T 101 (271)
T ss_dssp TCCCCEEEEECCTTCHHHHHHHHH--HTTCCEEEE---CTTCHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEEC-C
T ss_pred CCCcEEEEEEcCHHHHHHHHHHHH--hCCCCeEEE---ccCCHHHHHHHHhhcCHHHHHhCCceEEEEcCCCeEEEeC-C
Confidence 677 3455555667777777766 356655422 223 23333331 1111221122 121 12211 0
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
--.|++.+|+..+.+++..+++|+|||.+|.+++..|.+.| . +++++|++
T Consensus 102 D~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G-~--~V~v~~R~ 151 (271)
T 1nyt_A 102 DGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLD-C--AVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTT-C--EEEEECSS
T ss_pred CHHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcC-C--EEEEEECC
Confidence 25677778887888899999999999999999999999999 4 69988874
No 123
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.53 E-value=0.19 Score=53.47 Aligned_cols=91 Identities=18% Similarity=0.327 Sum_probs=61.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---------ccCCCCHHHHhccCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---------DTTARTLSDIIPNAD 264 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---------~~~~~~L~e~i~~~~ 264 (766)
+.||.|+|+|+.|..+|..|.+.|. +++++|+.. +.....+....+ -.-..++.| ++.+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~---~V~~~~r~~-------~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aD 82 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE---EVILWARRK-------EIVDLINVSHTSPYVEESKITVRATNDLEE-IKKED 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH-------HHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCH-------HHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCC
Confidence 5699999999999999999999985 488888741 111222211100 011246777 88889
Q ss_pred EEEecCCCCCCCHHHHHhhc-cCcEEEeccCCC
Q psy14495 265 IFLGLSVSGVLKKEMVLQMA-KNPIILALANPL 296 (766)
Q Consensus 265 vliG~S~~g~ft~evv~~M~-~~PiIfaLsNPt 296 (766)
++| ++.+....+++++.+. +..+|..++|..
T Consensus 83 vVi-l~vk~~~~~~v~~~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 83 ILV-IAIPVQYIREHLLRLPVKPSMVLNLSKGI 114 (335)
T ss_dssp EEE-ECSCGGGHHHHHTTCSSCCSEEEECCCCC
T ss_pred EEE-EECCHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 766 4544467788888877 456899999975
No 124
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.33 E-value=0.34 Score=51.51 Aligned_cols=93 Identities=16% Similarity=0.317 Sum_probs=57.8
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH------hcccc--CCCCHHHHhccCcEEE
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR------FIKDT--TARTLSDIIPNADIFL 267 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~------~a~~~--~~~~L~e~i~~~~vli 267 (766)
||.|+|||+.|.++|..|...|. .++++++|.+- + .+...... +.... ...+ .++++++|++|
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~-~~~V~l~D~~~----~---~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvVi 72 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGF-AREMVLIDVDK----K---RAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVI 72 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSSH----H---HHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCeEEEEeCCh----H---HHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEE
Confidence 79999999999999999999886 24699999851 1 11111111 11100 0124 46788899766
Q ss_pred -ecCCCCC--------------CCHHHHHhhc---cCcEEEeccCCCC
Q psy14495 268 -GLSVSGV--------------LKKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 268 -G~S~~g~--------------ft~evv~~M~---~~PiIfaLsNPt~ 297 (766)
-+..+.. .-+++++.|. +.-+|+-.|||..
T Consensus 73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 2222221 1256666664 5667777999974
No 125
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.26 E-value=0.16 Score=53.98 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=59.9
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH--------hcc----cc-CCCCHHHHhc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR--------FIK----DT-TARTLSDIIP 261 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~--------~a~----~~-~~~~L~e~i~ 261 (766)
.||.|+|+|+-|..+|..|.+.|. +++++|+.-. ...++. +-. .. -..++.++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~~---------~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~ 70 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH---CVSVVSRSDY---------ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET 70 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC---EEEEECSTTH---------HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCChH---------HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC
Confidence 589999999999999999999884 5888887421 111110 000 00 0135666666
Q ss_pred cCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 262 NADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 262 ~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
.+|++| ++.+-..++++++.+. +..+|+.+.|--
T Consensus 71 ~~DlVi-lavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 71 KPDCTL-LCIKVVEGADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp CCSEEE-ECCCCCTTCCHHHHHTTSCCTTCEEEEECSSS
T ss_pred CCCEEE-EecCCCChHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 789877 6664445668888887 456888899975
No 126
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.22 E-value=0.21 Score=52.63 Aligned_cols=90 Identities=21% Similarity=0.197 Sum_probs=59.5
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcC--CccccCCCCCCCcHHHHHhc--------cc-cCCC--CHHHHhcc
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL--AGVLYKGRSELMDSNKARFI--------KD-TTAR--TLSDIIPN 262 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~--~Glv~~~r~~~l~~~k~~~a--------~~-~~~~--~L~e~i~~ 262 (766)
||.|+|+|..|..+|..|.+.|. +++++|+ +.- .+...+.... .. .-.. ++.|+++.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~---~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN---EVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN 71 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC---EEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCC---eEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecHHhHHHHHhc
Confidence 79999999999999999999885 5899987 321 1111111110 00 0112 68888999
Q ss_pred CcEEEecCCCCCCCHHHHHhhc---cCcEEEeccCCC
Q psy14495 263 ADIFLGLSVSGVLKKEMVLQMA---KNPIILALANPL 296 (766)
Q Consensus 263 ~~vliG~S~~g~ft~evv~~M~---~~PiIfaLsNPt 296 (766)
+|++| ++.+....+++++.+. +..+|..++|-.
T Consensus 72 ~D~vi-~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 72 AEVVL-LGVSTDGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp CSEEE-ECSCGGGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred CCEEE-EcCChHHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 99877 4443335677776654 466888899865
No 127
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.00 E-value=0.54 Score=49.90 Aligned_cols=98 Identities=13% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCC-CccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFP-LQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~-~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S 270 (766)
++..||.|+|+|..|.++|..|.+.|.. ..+++++|+.- ++ +.+...+..=++ -..+..|+++.+|++| ++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~----~~-~~~~~l~~~G~~--~~~~~~e~~~~aDvVi-la 91 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM----DL-ATVSALRKMGVK--LTPHNKETVQHSDVLF-LA 91 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT----TS-HHHHHHHHHTCE--EESCHHHHHHHCSEEE-EC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc----cH-HHHHHHHHcCCE--EeCChHHHhccCCEEE-EE
Confidence 3446899999999999999999999952 24799888731 10 012222111011 1246889999999876 45
Q ss_pred CCCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 271 VSGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 271 ~~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
.+....+++++.+. +..+|.-++|..+
T Consensus 92 v~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 92 VKPHIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred eCHHHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44445667777665 4568889999875
No 128
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.81 E-value=0.1 Score=49.18 Aligned_cols=37 Identities=27% Similarity=0.324 Sum_probs=31.0
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++....+|+|+|+|..|..+++.|.+.|. +++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 45667799999999999999999999985 49999874
No 129
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.64 E-value=0.33 Score=52.10 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=61.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCC----CCcHHHHHhccccC---CCCHHHHhccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSE----LMDSNKARFIKDTT---ARTLSDIIPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~----~l~~~k~~~a~~~~---~~~L~e~i~~~~vli 267 (766)
.||.|+|||+.|.++|.+|...|.- +++|+|.+- ++-+ ++.+...++..... ..++.++++++|++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~--~V~L~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVK----GMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS----SHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCh----hHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 5899999999999999999998873 399999852 1100 11111111111111 267888999999876
Q ss_pred ecC---C-CCC----------------CCHHHHHhhc---cCcEEEeccCCCCc
Q psy14495 268 GLS---V-SGV----------------LKKEMVLQMA---KNPIILALANPLPE 298 (766)
Q Consensus 268 G~S---~-~g~----------------ft~evv~~M~---~~PiIfaLsNPt~E 298 (766)
=+- . +|. +-+++.+.|. ++-+|+--|||..-
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 332 2 333 1245555554 56777778999643
No 130
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.61 E-value=0.57 Score=49.78 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=59.4
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHH-HhccCcEEEecCCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSD-IIPNADIFLGLSVS 272 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e-~i~~~~vliG~S~~ 272 (766)
-.||.|+|+|..|..+|..|.+.|.. .+++++|++- +.+...+..-+.+.-..++.| +++++|++| ++.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~-~~V~~~dr~~-------~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVi-lavp 103 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINP-------ESISKAVDLGIIDEGTTSIAKVEDFSPDFVM-LSSP 103 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCH-------HHHHHHHHTTSCSEEESCTTGGGGGCCSEEE-ECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCC-CEEEEEECCH-------HHHHHHHHCCCcchhcCCHHHHhhccCCEEE-EeCC
Confidence 36999999999999999999999973 3699888731 111111111010011256888 899999887 6654
Q ss_pred CCCCHHHHHhhc----cCcEEEeccC
Q psy14495 273 GVLKKEMVLQMA----KNPIILALAN 294 (766)
Q Consensus 273 g~ft~evv~~M~----~~PiIfaLsN 294 (766)
-...+++++... +.-||.-.+.
T Consensus 104 ~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCC
Confidence 334566666554 5667766654
No 131
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.27 E-value=0.53 Score=48.52 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=59.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhc-cCcEEEecCCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIP-NADIFLGLSVSG 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~-~~~vliG~S~~g 273 (766)
.||.|+|+|..|..++..|.+.|.. .+++++|++. +.+...+..-.......++.++++ ++|++| ++.+.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~-~~V~~~d~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVi-lavp~ 72 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINP-------ESISKAVDLGIIDEGTTSIAKVEDFSPDFVM-LSSPV 72 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCH-------HHHHHHHHTTSCSEEESCGGGGGGTCCSEEE-ECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCC-cEEEEEeCCH-------HHHHHHHHCCCcccccCCHHHHhcCCCCEEE-EcCCH
Confidence 3799999999999999999999862 3688888731 111111111000001246888999 999877 45433
Q ss_pred CCCHHHHHhh----ccCcEEEeccCCCC
Q psy14495 274 VLKKEMVLQM----AKNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~~M----~~~PiIfaLsNPt~ 297 (766)
..+.++++.+ .+..+|.-++|-..
T Consensus 73 ~~~~~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 73 RTFREIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred HHHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence 3445665544 45678887887553
No 132
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=90.09 E-value=2.3 Score=44.95 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=64.1
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccCCCCHH
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTTARTLS 257 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~L~ 257 (766)
+.+++..+. +....+|.|+|+|..|..+++.|.+. |+. +++++|+. . +........+.. -....++.
T Consensus 123 ~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~~g~~--~V~v~dr~----~---~~~~~l~~~~~~~~~~~~~~~ 191 (312)
T 2i99_A 123 SAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQFSFK--EVRIWNRT----K---ENAEKFADTVQGEVRVCSSVQ 191 (312)
T ss_dssp HHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHHCCCS--EEEEECSS----H---HHHHHHHHHSSSCCEECSSHH
T ss_pred HHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHhCCCc--EEEEEcCC----H---HHHHHHHHHhhCCeEEeCCHH
Confidence 344443332 44667999999999999999999876 764 79988872 1 112222222211 11246899
Q ss_pred HHhccCcEEEecCC--CCCCCHHHHHhhccCcEEEeccCCCC
Q psy14495 258 DIIPNADIFLGLSV--SGVLKKEMVLQMAKNPIILALANPLP 297 (766)
Q Consensus 258 e~i~~~~vliG~S~--~g~ft~evv~~M~~~PiIfaLsNPt~ 297 (766)
|+++++|+++=+.. ...+.+ ..+.+.-+|+.++.-+|
T Consensus 192 e~v~~aDiVi~atp~~~~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 192 EAVAGADVIITVTLATEPILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp HHHTTCSEEEECCCCSSCCBCG---GGSCTTCEEEECCCCST
T ss_pred HHHhcCCEEEEEeCCCCcccCH---HHcCCCcEEEeCCCCCC
Confidence 99999998874432 223433 34456778888764333
No 133
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.09 E-value=0.42 Score=47.78 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=56.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEE-EcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFV-TDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~-~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.||.|+|+|..|..+|..|.+.|.. +++ +|++ ++.+......+-... ..+..++++.+|++| ++.+.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~---V~~v~~r~-------~~~~~~l~~~~g~~~-~~~~~~~~~~aDvVi-lavp~ 91 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIP---AIIANSRG-------PASLSSVTDRFGASV-KAVELKDALQADVVI-LAVPY 91 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCC---EEEECTTC-------GGGGHHHHHHHTTTE-EECCHHHHTTSSEEE-EESCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE---EEEEECCC-------HHHHHHHHHHhCCCc-ccChHHHHhcCCEEE-EeCCh
Confidence 5899999999999999999998864 665 6652 122333333332111 124566688898876 44444
Q ss_pred CCCHHHHHhhc--cCcEEEeccCCC
Q psy14495 274 VLKKEMVLQMA--KNPIILALANPL 296 (766)
Q Consensus 274 ~ft~evv~~M~--~~PiIfaLsNPt 296 (766)
...+++++.+. +..+|.-++||.
T Consensus 92 ~~~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 92 DSIADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp GGHHHHHTTCSCCTTCEEEECCCCB
T ss_pred HHHHHHHHHhhccCCCEEEEcCCCC
Confidence 45566666653 234666666664
No 134
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.05 E-value=0.1 Score=48.93 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=29.8
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...+++|+|+|..|..+++.|.+.|.+ ++++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~---V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQN---VTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 456899999999999999999999865 9999884
No 135
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.83 E-value=0.35 Score=51.79 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
-.||.|+|||..|.|||..+...|++ ++++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~---V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe---EEEEECC
Confidence 35899999999999999999999987 9999964
No 136
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.49 E-value=0.72 Score=48.96 Aligned_cols=89 Identities=15% Similarity=0.211 Sum_probs=58.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---c----------cCCCCHHHHhc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---D----------TTARTLSDIIP 261 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---~----------~~~~~L~e~i~ 261 (766)
.||.|+|+|..|..+|..|.+.|. +++++|++. +.+...+..+.. . ....++.++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDIDA-------QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK 74 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH-------HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH-------HHHHHHHhcCCeEEeccccccccccceecCCHHHHHh
Confidence 589999999999999999999885 488888742 112222222100 0 11257888899
Q ss_pred cCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccC
Q psy14495 262 NADIFLGLSVSGVLKKEMVLQMA----KNPIILALAN 294 (766)
Q Consensus 262 ~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsN 294 (766)
.+|++| ++.+....+++++.+. +..+|+.+.|
T Consensus 75 ~~D~vi-~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 75 DADVIL-IVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp TCSEEE-ECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCEEE-EeCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 999876 4443334478887765 4566776755
No 137
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.39 E-value=1.1 Score=48.23 Aligned_cols=106 Identities=16% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc
Q psy14495 169 DQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI 248 (766)
Q Consensus 169 D~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a 248 (766)
+.++.....++..+.+++..+.+ ...+|+|+|||..|...+.+.+..|.. +++.+|+. +.|..++
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~------------~~~~~~a 223 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARLAGAT--TVILSTRQ------------ATKRRLA 223 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSC------------HHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCC------------HHHHHHH
Confidence 34554445566667777665544 457999999999999888888899986 68877762 3444444
Q ss_pred cc--------cCCCCHHHHhcc--------CcEEEecCCCCCCCHHHHHhhccCcEE
Q psy14495 249 KD--------TTARTLSDIIPN--------ADIFLGLSVSGVLKKEMVLQMAKNPII 289 (766)
Q Consensus 249 ~~--------~~~~~L~e~i~~--------~~vliG~S~~g~ft~evv~~M~~~PiI 289 (766)
+. ....++.+.++. +|++|=+++.+..-++.++.+++.-.|
T Consensus 224 ~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~v 280 (370)
T 4ej6_A 224 EEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTV 280 (370)
T ss_dssp HHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEE
T ss_pred HHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 42 123456555543 588887765333334555555543333
No 138
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.29 E-value=0.22 Score=53.76 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=35.1
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|++.||+++|||..|..+|..|...|+. +|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg--~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVR--KITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEecCCE
Confidence 57788999999999999999999999998 899999964
No 139
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.19 E-value=0.23 Score=51.59 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=56.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-------------CCCCHHHHhc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-------------TARTLSDIIP 261 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-------------~~~~L~e~i~ 261 (766)
.||.|+|+|..|..+|..|.+.|. +++++|++. +.+...++.-.... ...++.++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQWP-------AHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNE 73 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH-------HHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECCH-------HHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCC
Confidence 489999999999999999999885 589888742 11222221111100 1112233344
Q ss_pred cCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 262 NADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 262 ~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
.+|++| ++.+....+++++.+. +..+|..++|...
T Consensus 74 ~~d~vi-~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 74 QVDLII-ALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCSEEE-ECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred CCCEEE-EEeccccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 788876 4443224577777665 4678888988653
No 140
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.85 E-value=0.83 Score=48.58 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=40.2
Q ss_pred chhHHHHHHHHHHHHh-HhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 171 HGTAIIVGSAILNGLK-LVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 171 qGTa~v~lA~ll~al~-~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++.....++..+.+++ ..+. ..++|+|+|||..|..++.+++..|.. +++.+|+
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~~Ga~--~Vi~~~~ 197 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRASGAG--PILVSDP 197 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHHTTCC--SEEEECS
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECC
Confidence 3433334555567776 4443 889999999999999999999999985 6888876
No 141
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=88.84 E-value=2.9 Score=44.41 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=67.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcc----c-cCCCCHHHHhccCcEE
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----D-TTARTLSDIIPNADIF 266 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----~-~~~~~L~e~i~~~~vl 266 (766)
...++.|+|+|..|-..++.|.+. ++. +|+++|+. +. ..+...+.+ . ... ++.|+++++|++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~--~V~v~~r~------~a---~~la~~l~~~~g~~~~~~-~~~eav~~aDIV 187 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALE--AILVHDPY------AS---PEILERIGRRCGVPARMA-APADIAAQADIV 187 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCC--EEEEECTT------CC---HHHHHHHHHHHTSCEEEC-CHHHHHHHCSEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCc--EEEEECCc------HH---HHHHHHHHHhcCCeEEEe-CHHHHHhhCCEE
Confidence 457999999999999999988764 544 89999996 21 233333321 1 123 899999999999
Q ss_pred EecCC--CCCCCHHHHHhhccCcEEEeccCCCC---ccCHhhH
Q psy14495 267 LGLSV--SGVLKKEMVLQMAKNPIILALANPLP---EILPEDI 304 (766)
Q Consensus 267 iG~S~--~g~ft~evv~~M~~~PiIfaLsNPt~---E~~pe~a 304 (766)
+-+.. ...|..++ +.+...|..+.--+| |+.|+-.
T Consensus 188 i~aT~s~~pvl~~~~---l~~G~~V~~vGs~~p~~~El~~~~~ 227 (313)
T 3hdj_A 188 VTATRSTTPLFAGQA---LRAGAFVGAIGSSLPHTRELDDEAL 227 (313)
T ss_dssp EECCCCSSCSSCGGG---CCTTCEEEECCCSSTTCCCCCHHHH
T ss_pred EEccCCCCcccCHHH---cCCCcEEEECCCCCCchhhcCHHHH
Confidence 86643 23555443 346889998886443 8888754
No 142
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.83 E-value=0.6 Score=46.50 Aligned_cols=94 Identities=15% Similarity=0.236 Sum_probs=55.5
Q ss_pred CCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-cCCCCHHHHhccCcEEE
Q psy14495 189 KKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-TTARTLSDIIPNADIFL 267 (766)
Q Consensus 189 ~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-~~~~~L~e~i~~~~vli 267 (766)
+++-...||.|+|+|..|..++..|.+.|. +++++|++- +....+++. -...++.++++++|++|
T Consensus 23 ~~~~~~~~I~iiG~G~~G~~la~~l~~~g~---~V~~~~r~~-----------~~~~~~~~~g~~~~~~~~~~~~~DvVi 88 (215)
T 2vns_A 23 KVPDEAPKVGILGSGDFARSLATRLVGSGF---KVVVGSRNP-----------KRTARLFPSAAQVTFQEEAVSSPEVIF 88 (215)
T ss_dssp ------CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSH-----------HHHHHHSBTTSEEEEHHHHTTSCSEEE
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHHCCC---EEEEEeCCH-----------HHHHHHHHcCCceecHHHHHhCCCEEE
Confidence 333445789999999999999999999886 488888631 111122211 01126888999999877
Q ss_pred ecCCCCCCCHHHHH--hhccCcEEEeccCCCC
Q psy14495 268 GLSVSGVLKKEMVL--QMAKNPIILALANPLP 297 (766)
Q Consensus 268 G~S~~g~ft~evv~--~M~~~PiIfaLsNPt~ 297 (766)
++.+....+++++ .+.+.-+|.-+||+.+
T Consensus 89 -~av~~~~~~~v~~l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 89 -VAVFREHYSSLCSLSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp -ECSCGGGSGGGGGGHHHHTTCEEEECCCCCH
T ss_pred -ECCChHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 3332212334432 2225667777777753
No 143
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=88.82 E-value=2.5 Score=45.33 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=101.7
Q ss_pred HHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhC------CcCCCc
Q psy14495 124 DKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVK------KKMKDC 195 (766)
Q Consensus 124 ~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~------~~l~d~ 195 (766)
|.+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| ++++..
T Consensus 88 Esl~DTarvls~~~D~iviR~~~-~~~~~~lA~~~---~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl 162 (328)
T 3grf_A 88 ETVQDTAEVFSRMVDICTARLAT-KEMMREMAQHA---SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGI 162 (328)
T ss_dssp -CHHHHHHHHTTTCSEEEEECSS-HHHHHHHHHHC---SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGC
T ss_pred CCHHHHHHHHHhhCCEEEEecCC-hhHHHHHHHhC---CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCc
Confidence 44445555444333345444443 23444555554 599999 76 6666677888777777766 379999
Q ss_pred eEEEECcchhhHHHHHHH----HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-------cCCCCHHHHhccCc
Q psy14495 196 KLVVSGAGAAALACLDLI----IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-------TTARTLSDIIPNAD 264 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l----~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-------~~~~~L~e~i~~~~ 264 (766)
||+++|-+.- .+++.+ ...|+. +.++-.+|+..+-. +.+.+.-+.+|+. +...++.|+++++|
T Consensus 163 ~va~vGD~~~--~va~Sl~~~~~~~G~~---v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aD 236 (328)
T 3grf_A 163 KFAYCGDSMN--NVTYDLMRGCALLGME---CHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVD 236 (328)
T ss_dssp CEEEESCCSS--HHHHHHHHHHHHHTCE---EEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCS
T ss_pred EEEEeCCCCc--chHHHHHHHHHHcCCE---EEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCC
Confidence 9999999853 344443 356875 99999998863211 1122222233322 12368999999999
Q ss_pred EEEecCC------------------CCCCCHHHHHhhccCcEEEeccCC---CCccCHhhH
Q psy14495 265 IFLGLSV------------------SGVLKKEMVLQMAKNPIILALANP---LPEILPEDI 304 (766)
Q Consensus 265 vliG~S~------------------~g~ft~evv~~M~~~PiIfaLsNP---t~E~~pe~a 304 (766)
|+.--.+ +--+|++.++.+.++-||+- .-| --|++.|-.
T Consensus 237 vvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH-~lPa~Rg~EI~~eV~ 296 (328)
T 3grf_A 237 VVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMN-CLPATRGEEQTASVI 296 (328)
T ss_dssp EEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEE-CSCCCTTTTBCHHHH
T ss_pred EEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEEC-CCCCCCCCccCHHHh
Confidence 9973211 11367777777666666652 224 358888633
No 144
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.82 E-value=1.3 Score=46.65 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=60.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc---cCCCCHHHHhccCcEEEecC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD---TTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~---~~~~~L~e~i~~~~vliG~S 270 (766)
..||.|+|+|..|.++|..|.+.|.. +++++|++- ++.+...+.. .-..++.|+++.+|++| ++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~--~V~~~dr~~----------~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi-~~ 90 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAI--DMAAYDAAS----------AESWRPRAEELGVSCKASVAEVAGECDVIF-SL 90 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCC--EEEEECSSC----------HHHHHHHHHHTTCEECSCHHHHHHHCSEEE-EC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCC--eEEEEcCCC----------CHHHHHHHHHCCCEEeCCHHHHHhcCCEEE-Ee
Confidence 36899999999999999999999963 699888731 1112111111 12358999999999877 44
Q ss_pred CCCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 271 VSGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 271 ~~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
.+.....++++.+. +..+|.-+|.-.|
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~ 121 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFTSCSP 121 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECCCCCH
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcCCCCH
Confidence 43333345555543 5678887876444
No 145
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.81 E-value=0.2 Score=49.31 Aligned_cols=91 Identities=15% Similarity=0.196 Sum_probs=58.5
Q ss_pred eEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc---c--ccCCCCHHHHhccCcEEEec
Q psy14495 196 KLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI---K--DTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 196 ~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a---~--~~~~~~L~e~i~~~~vliG~ 269 (766)
||.|+| +|..|..++..|.+.|. +++++|++- +.....+..+. . +....++.++++++|++|=
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~---~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~- 70 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE-------EKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVL- 70 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH-------HHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEE-
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC---EEEEEeCCH-------HHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEE-
Confidence 799999 99999999999998885 488888731 11222222111 0 0112468889999998873
Q ss_pred CCCCCCCHHHHHhhc---cCcEEEeccCCCC
Q psy14495 270 SVSGVLKKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 270 S~~g~ft~evv~~M~---~~PiIfaLsNPt~ 297 (766)
+.+....+++++.+. +..+|.-++|+..
T Consensus 71 ~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 71 TIPWEHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp CSCHHHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred eCChhhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 332223456665543 4678888888653
No 146
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.76 E-value=0.32 Score=51.42 Aligned_cols=39 Identities=13% Similarity=0.373 Sum_probs=36.0
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++|++.||+|+|+|..|..++..|..+|+. +|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG--~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIG--KLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCC--EEEEECCCc
Confidence 468999999999999999999999999997 899999873
No 147
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.74 E-value=0.58 Score=48.79 Aligned_cols=47 Identities=23% Similarity=0.344 Sum_probs=38.1
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.|+..+|+..|.. ...+++|+|||.+|-+++..|.+.|+. +|+++++
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~--~i~v~nR 151 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFE--KLKIYAR 151 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHHTTCC--CEEEECS
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHHCCCC--EEEEEeC
Confidence 4555566655554 567999999999999999999999987 7999887
No 148
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.71 E-value=0.49 Score=53.36 Aligned_cols=97 Identities=18% Similarity=0.152 Sum_probs=64.6
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc--cccCCCCHHHHhcc---CcE
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI--KDTTARTLSDIIPN---ADI 265 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a--~~~~~~~L~e~i~~---~~v 265 (766)
.++..+|.|+|+|..|.++|..|.+.|.+ ++++|+.- +.....+..+. .-....++.|+++. +|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~---V~v~~r~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYT---VSIFNRSR-------EKTEEVIAENPGKKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCC---EEEECSSH-------HHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCE
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCe---EEEEeCCH-------HHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCE
Confidence 36677999999999999999999999975 88887631 11222222210 00123579999987 898
Q ss_pred EEecCC-CCCCCHHHHHhhc----cCcEEEeccCCCCc
Q psy14495 266 FLGLSV-SGVLKKEMVLQMA----KNPIILALANPLPE 298 (766)
Q Consensus 266 liG~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~E 298 (766)
+| ++. ++..++++++.+. +..||.-+||-.++
T Consensus 82 Vi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~ 118 (480)
T 2zyd_A 82 IL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ 118 (480)
T ss_dssp EE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred EE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence 77 554 3456778887665 45688899997653
No 149
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.63 E-value=0.75 Score=49.03 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=37.7
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++..+.+++..+. ..++|+|+|||..|..++.+++..|.+ +++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~~Ga~--~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKASGAY--PVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHHTTCC--SEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECC
Confidence 44455667754443 888999999999999999999999975 6888876
No 150
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=88.62 E-value=1.1 Score=47.60 Aligned_cols=148 Identities=15% Similarity=0.186 Sum_probs=94.2
Q ss_pred cCCCccccCCCC-CCHHHHHHHHHHhC--CCccc--cccccCCCCchHHHHHHHhhcCCCcEEec--------CCchhHH
Q psy14495 109 AGIDVFDLEINE-TDPDKLCDIIFSLE--PTFGG--INLEDIKAPECFYIEKKLRNHMKIPVFHD--------DQHGTAI 175 (766)
Q Consensus 109 ~gi~~l~v~~~~-~~~~~~v~~v~~~~--p~~g~--i~~ED~~~~~af~il~~~~~~~~~~~fnD--------D~qGTa~ 175 (766)
.||++.-+.+.. ..-+|+++.+..+- |+.=+ +|+==.+.-+..++++.-..+-++=-||. ...+-.-
T Consensus 81 vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~P 160 (303)
T 4b4u_A 81 VGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGS 160 (303)
T ss_dssp TTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCC
T ss_pred cCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccC
Confidence 567654444443 24677777776654 44322 33222222222333333221111222221 1122334
Q ss_pred HHHHHHHHHHhHhCCcCCCceEEEECcc-hhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCC
Q psy14495 176 IVGSAILNGLKLVKKKMKDCKLVVSGAG-AAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTAR 254 (766)
Q Consensus 176 v~lA~ll~al~~~~~~l~d~~iv~~GaG-~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~ 254 (766)
+|-.|++--|+..+.+++..++|++|.+ --|--+|.||.+.|.+ +++|.|+- .
T Consensus 161 cTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~AT---VTi~Hs~T-----------------------~ 214 (303)
T 4b4u_A 161 ATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANAT---VTICHSRT-----------------------Q 214 (303)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTTC-----------------------S
T ss_pred ccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCE---EEEecCCC-----------------------C
Confidence 6778999999999999999999999965 4688889999998877 88777631 2
Q ss_pred CHHHHhccCcEEEecCC-CCCCCHHHHHh
Q psy14495 255 TLSDIIPNADIFLGLSV-SGVLKKEMVLQ 282 (766)
Q Consensus 255 ~L~e~i~~~~vliG~S~-~g~ft~evv~~ 282 (766)
+|.+..+++|++|-.-+ ++.++.||||.
T Consensus 215 dl~~~~~~ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 215 NLPELVKQADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp SHHHHHHTCSEEEECSCSTTCBCGGGSCT
T ss_pred CHHHHhhcCCeEEeccCCCCccccccccC
Confidence 37888899999998877 89999888775
No 151
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.58 E-value=0.94 Score=47.02 Aligned_cols=32 Identities=19% Similarity=0.193 Sum_probs=29.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.||.|+|+|..|.++|..+.+.|.. ++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 5899999999999999999999974 9999974
No 152
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.43 E-value=0.63 Score=47.53 Aligned_cols=96 Identities=17% Similarity=0.263 Sum_probs=62.1
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S 270 (766)
.+...||.|+|+|..|..++..|.+.|.. .++++|++. +.....+..+- -....++.|+++.+|++|=+.
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~--~v~~~~~~~-------~~~~~~~~~~g-~~~~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFR--IVQVYSRTE-------ESARELAQKVE-AEYTTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSH-------HHHHHHHHHTT-CEEESCGGGSCSCCSEEEECC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCe--EEEEEeCCH-------HHHHHHHHHcC-CceeCCHHHHhcCCCEEEEec
Confidence 34556999999999999999999998854 478888631 11222222210 011246888888899877333
Q ss_pred CCCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 271 VSGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 271 ~~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
.+.. .+++++.+. +..+|.-+|+-.+
T Consensus 77 ~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 77 KDSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CHHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred CHHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 2222 367777654 4668888888554
No 153
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.38 E-value=0.57 Score=46.52 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=51.1
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~ 269 (766)
..+...||.|+|+|..|.++|..|.+.|. +++++|++ +. +++.+|++| +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~--------~~-------------------~~~~aD~vi-~ 63 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSK--------DQ-------------------ATTLGEIVI-M 63 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTT--------CC-------------------CSSCCSEEE-E
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCC--------HH-------------------HhccCCEEE-E
Confidence 45677899999999999999999999885 48888763 11 456788766 3
Q ss_pred CCCCCCCHHHHHhhc---cCcEEEeccCCC
Q psy14495 270 SVSGVLKKEMVLQMA---KNPIILALANPL 296 (766)
Q Consensus 270 S~~g~ft~evv~~M~---~~PiIfaLsNPt 296 (766)
+.+....+++++.+. +..+|.-+||+.
T Consensus 64 av~~~~~~~v~~~l~~~~~~~~vi~~~~g~ 93 (209)
T 2raf_A 64 AVPYPALAALAKQYATQLKGKIVVDITNPL 93 (209)
T ss_dssp CSCHHHHHHHHHHTHHHHTTSEEEECCCCB
T ss_pred cCCcHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 433333456665543 367888899954
No 154
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.20 E-value=0.52 Score=49.98 Aligned_cols=98 Identities=16% Similarity=0.345 Sum_probs=59.6
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCC----CCcHHHHHhccccC---CCCHHHHhccCcEEEe
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSE----LMDSNKARFIKDTT---ARTLSDIIPNADIFLG 268 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~----~l~~~k~~~a~~~~---~~~L~e~i~~~~vliG 268 (766)
||.|+|||+.|.+++-.+...|+ +.++|+|.+ .++.+ ++.+...++..... ..+. ++++++|++|=
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l--~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY--DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLV 73 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC--SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CEEEECcCHHHHHHHHHHHhCCC--CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEE
Confidence 68999999999999999988888 479999985 12100 11111111111111 1455 78999998764
Q ss_pred cCC----CCC-----------CCHHHHHhhc---cCcEEEeccCCCCccC
Q psy14495 269 LSV----SGV-----------LKKEMVLQMA---KNPIILALANPLPEIL 300 (766)
Q Consensus 269 ~S~----~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E~~ 300 (766)
+.+ +|. .-+++++.|. ++.+|+-.|||....+
T Consensus 74 ~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t 123 (308)
T 2d4a_B 74 TAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMT 123 (308)
T ss_dssp CCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH
T ss_pred eCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHH
Confidence 322 332 1234555554 5666666799875444
No 155
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.13 E-value=0.44 Score=50.13 Aligned_cols=100 Identities=22% Similarity=0.327 Sum_probs=58.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCc-HHHHHhccccC---CCCHHHHhccCcEEEec
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMD-SNKARFIKDTT---ARTLSDIIPNADIFLGL 269 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~-~~k~~~a~~~~---~~~L~e~i~~~~vliG~ 269 (766)
..||.|+|||+.|..++..|...|.. .+++++|++---.++ ..++ .+-..+..... ..+ .++++++|++|=+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~-~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~ 82 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIA-REIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVIT 82 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEEC
Confidence 35999999999999999999998862 369999985300000 0010 00011111100 113 3678889976622
Q ss_pred C-CCCC--CC------------HHHHHhhc---cCcEEEeccCCCC
Q psy14495 270 S-VSGV--LK------------KEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 270 S-~~g~--ft------------~evv~~M~---~~PiIfaLsNPt~ 297 (766)
- .+.. -+ +++++.+. ++.+|+.++||..
T Consensus 83 v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 83 AGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 2 2211 01 16666665 5778989999974
No 156
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.13 E-value=0.28 Score=55.71 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEE--ecCCchhHHHHHHHHHHHHhHhCC--------cC
Q psy14495 123 PDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVF--HDDQHGTAIIVGSAILNGLKLVKK--------KM 192 (766)
Q Consensus 123 ~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~f--nDD~qGTa~v~lA~ll~al~~~~~--------~l 192 (766)
...+++.+...+|+ |.++-+......++-++|.- +.+|++ |+..-+.+.....-++..+..... .-
T Consensus 135 ~~~~l~~~a~~~~~---v~~~~vd~~~~~~~~~~~~i-~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 135 VVQALNLMAVLNPR---IKHTAIDGGTFQNEITERNV-MGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHCTT---EEEEEEETTTCHHHHHHTTC-CSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHhHcCc---eEEEEEechhhHHHHHHhCC-CccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 44455555555553 44444444455667778854 468865 555556666666666666543211 12
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...+|+|+|+|.||+.+|..|.+.|.+ +.++|++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCe---EEEEECC
Confidence 356899999999999999999999975 7788763
No 157
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.09 E-value=0.43 Score=51.08 Aligned_cols=102 Identities=14% Similarity=0.247 Sum_probs=59.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc---CCCCHHHHhccCcEEEec--
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT---TARTLSDIIPNADIFLGL-- 269 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~~L~e~i~~~~vliG~-- 269 (766)
.||.|+|||+.|.++|.+|...|+- +++|+|.+-=..++...++.+...++.... ...++ ++++++|++|=+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~--~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLG--DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 5999999999999999999999983 399999852000000001111111111111 11466 889999987633
Q ss_pred -CC-CCC-----------CCHHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 270 -SV-SGV-----------LKKEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 270 -S~-~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
.. +|. +.+++.+.+. ++-+|+--|||....
T Consensus 92 ~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~ 137 (328)
T 2hjr_A 92 VPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAM 137 (328)
T ss_dssp CCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH
T ss_pred CCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHH
Confidence 22 332 1334455444 566666679997544
No 158
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.00 E-value=0.91 Score=46.59 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=56.7
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVL 275 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~f 275 (766)
||.|+|+|..|..++..|.+.|. +++++|++. +.+...+..-.......++.++ +++|++| ++.+...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi-~av~~~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH---YLIGVSRQQ-------STCEKAVERQLVDEAGQDLSLL-QTAKIIF-LCTPIQL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH-------HHHHHHHHTTSCSEEESCGGGG-TTCSEEE-ECSCHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC---EEEEEECCH-------HHHHHHHhCCCCccccCCHHHh-CCCCEEE-EECCHHH
Confidence 79999999999999999999886 588888731 1111211100000112467888 8899877 4443335
Q ss_pred CHHHHHhhc----cCcEEEeccCCC
Q psy14495 276 KKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 276 t~evv~~M~----~~PiIfaLsNPt 296 (766)
.+++++.+. +..+|.-++|-.
T Consensus 70 ~~~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEEECCSCC
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCc
Confidence 567777654 456777777733
No 159
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=87.98 E-value=5.1 Score=42.87 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=93.8
Q ss_pred ccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHH--HHHHHH
Q psy14495 139 GINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALA--CLDLII 214 (766)
Q Consensus 139 ~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~g--ia~~l~ 214 (766)
.|-+-.++ +.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| +++..||+++|-|...++ .+..+.
T Consensus 116 ~iviR~~~-~~~~~~lA~~~---~vPVINa~~~-~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~ 189 (325)
T 1vlv_A 116 AIMFRGYK-QETVEKLAEYS---GVPVYNGLTD-EFHPTQALADLMTIEENFG-RLKGVKVVFMGDTRNNVATSLMIACA 189 (325)
T ss_dssp EEEEESSC-HHHHHHHHHHH---CSCEEESCCS-SCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred EEEEECCC-hHHHHHHHHhC---CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCcCcHHHHHHHHH
Confidence 34444443 44555566665 489999 33 5556667787777666655 799999999999732322 223334
Q ss_pred HcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC---C--------------
Q psy14495 215 DLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV---S-------------- 272 (766)
Q Consensus 215 ~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~---~-------------- 272 (766)
..|+. ++++=.+|+.-. +.+-..-+.+|+.. ...++.|+++++||+.-..+ +
T Consensus 190 ~~G~~---v~~~~P~~~~p~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~ 263 (325)
T 1vlv_A 190 KMGMN---FVACGPEELKPR---SDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKP 263 (325)
T ss_dssp HTTCE---EEEESCGGGCCC---HHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGG
T ss_pred HCCCE---EEEECCccccCC---HHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhh
Confidence 57875 999999887321 11212122333322 24689999999999886543 1
Q ss_pred CCCCHHHHHhh-ccCcEEEeccCCC---CccCHhhH
Q psy14495 273 GVLKKEMVLQM-AKNPIILALANPL---PEILPEDI 304 (766)
Q Consensus 273 g~ft~evv~~M-~~~PiIfaLsNPt---~E~~pe~a 304 (766)
--+|++.++.+ .++-||+- .-|- -|++.|-.
T Consensus 264 y~v~~ell~~a~k~dai~mH-~LP~~Rg~EI~~eV~ 298 (325)
T 1vlv_A 264 YQVNERVMEMTGKSETIFMH-CLPAVKGQEVTYEVI 298 (325)
T ss_dssp GCBCHHHHHTTCCTTCEEEE-CSCCCBTTTBCHHHH
T ss_pred cCCCHHHHHhccCCCeEEEC-CCCCCCCcccCHHHh
Confidence 13577777766 55655553 4453 38887643
No 160
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=87.86 E-value=5.3 Score=42.99 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=86.1
Q ss_pred chHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHH----HHcCCCCcc
Q psy14495 149 ECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLI----IDLGFPLQN 222 (766)
Q Consensus 149 ~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l----~~~g~~~~~ 222 (766)
.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| +++..||+++|-| .. +++.+ ...|+.
T Consensus 137 ~~~~~lA~~~---~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~n--va~Sl~~~~~~~G~~--- 205 (340)
T 4ep1_A 137 ADVEELAKES---SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-NN--VCHSLLLASAKVGMH--- 205 (340)
T ss_dssp HHHHHHHHHC---SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-CH--HHHHHHHHHHHHTCE---
T ss_pred hHHHHHHHhC---CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-ch--hHHHHHHHHHHcCCE---
Confidence 3444455554 599999 55 4555667777776666665 5999999999998 33 44443 346875
Q ss_pred EEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCCC--C--------------CCCHHHHH
Q psy14495 223 IFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSVS--G--------------VLKKEMVL 281 (766)
Q Consensus 223 i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~~--g--------------~ft~evv~ 281 (766)
++++=.+|+.-. +.+-+.-+.+|+.. ...++.|+++++||+.-..+. | -+|++.++
T Consensus 206 v~~~~P~~~~~~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~ 282 (340)
T 4ep1_A 206 MTVATPVGYRPN---EEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVK 282 (340)
T ss_dssp EEEECCTTCCCC---HHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHHHT
T ss_pred EEEECCcccCCC---HHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHH
Confidence 898888887421 11111122333332 236899999999999876641 1 35666665
Q ss_pred hhccCcEEEeccCC---CCccCHhh
Q psy14495 282 QMAKNPIILALANP---LPEILPED 303 (766)
Q Consensus 282 ~M~~~PiIfaLsNP---t~E~~pe~ 303 (766)
.+.++-||+ =.-| --|++.|-
T Consensus 283 ~ak~dai~M-HcLPa~Rg~EIt~eV 306 (340)
T 4ep1_A 283 HAKQTYHFL-HCLPAHREEEVTGEI 306 (340)
T ss_dssp TSCTTCEEE-ECSCCCBTTTBCHHH
T ss_pred hcCCCcEEE-CCCCCCCCceeCHHH
Confidence 554555555 2234 24888763
No 161
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=87.85 E-value=3.5 Score=44.24 Aligned_cols=135 Identities=11% Similarity=0.085 Sum_probs=84.0
Q ss_pred HHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhH-hCCcCCCceEEEECc
Q psy14495 125 KLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKL-VKKKMKDCKLVVSGA 202 (766)
Q Consensus 125 ~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~-~~~~l~d~~iv~~Ga 202 (766)
.+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||+| .|.+-.-.=+||=++.-.+. .|++|++.||+++|-
T Consensus 88 sl~DTarvLs~~~D~IviR~~~-~~~~~~lA~~~---~vPVINa~~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD 163 (333)
T 1duv_G 88 SIKDTARVLGRMYDGIQYRGYG-QEIVETLAEYA---SVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGD 163 (333)
T ss_dssp CHHHHHHHHTTTCSEEEEECSC-HHHHHHHHHHH---SSCEEESCCSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESC
T ss_pred cHHHHHHHHHHhCCEEEEEcCC-chHHHHHHHhC---CCCeEcCCCCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECC
Confidence 3444444433333345555544 44555566666 489999 22334455677888877777 676899999999999
Q ss_pred chhhHHHHHH----HHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 203 GAAALACLDL----IIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 203 G~ag~gia~~----l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
|.. .+++. +...|+. +.++-.+|+--. +.+-..-+.+|+.. ...++.|+++++||+.-..+
T Consensus 164 ~~~--~va~Sl~~~~~~~G~~---v~~~~P~~~~p~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w 233 (333)
T 1duv_G 164 ARN--NMGNSMLEAAALTGLD---LRLVAPQACWPE---AALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVW 233 (333)
T ss_dssp TTS--HHHHHHHHHHHHHCCE---EEEECCGGGCCC---HHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCS
T ss_pred Ccc--chHHHHHHHHHHcCCE---EEEECCcccCCC---HHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCc
Confidence 832 34333 3356875 999999887431 11212223344332 24689999999999987654
No 162
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.78 E-value=0.7 Score=49.21 Aligned_cols=100 Identities=14% Similarity=0.202 Sum_probs=64.1
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCC----ccEEEEcCCccccCCCCCCCcHHHHH-----hccc-------cCCCCHH
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPL----QNIFVTDLAGVLYKGRSELMDSNKAR-----FIKD-------TTARTLS 257 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~----~~i~~~D~~Glv~~~r~~~l~~~k~~-----~a~~-------~~~~~L~ 257 (766)
..||.|+|+|..|.++|..|.+.|... .+++++|++.-.. .+ ......+.. |-.. .-..++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIG-GK-KLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSS-SS-BHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhh-hh-HHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 469999999999999999999888311 3689998753211 00 011111111 1000 0124688
Q ss_pred HHhccCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 258 DIIPNADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 258 e~i~~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
|+++.+|++| ++.+....+++++.+. +..+|..++|-.
T Consensus 86 ~~~~~aD~Vi-lav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 86 QAAEDADILI-FVVPHQFIGKICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp HHHTTCSEEE-ECCCGGGHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred HHHcCCCEEE-EeCCHHHHHHHHHHHHhhCCCCCEEEEECCcc
Confidence 9999999877 5554456788888776 466888999843
No 163
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.78 E-value=0.88 Score=48.40 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=59.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH-------hcc-ccC---CCCHHHHhcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR-------FIK-DTT---ARTLSDIIPN 262 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~-------~a~-~~~---~~~L~e~i~~ 262 (766)
..||.|+|+|+-|..+|..|.+.|. +++++|+.-- +...++. ... ..+ ..++.+ ++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE---AINVLARGAT--------LQALQTAGLRLTEDGATHTLPVRATHDAAA-LGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC---CEEEECCHHH--------HHHHHHTCEEEEETTEEEEECCEEESCHHH-HCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC---EEEEEEChHH--------HHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCC
Confidence 4689999999999999999999985 4888887310 1111100 000 000 135665 577
Q ss_pred CcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 263 ADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 263 ~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
+|++| ++.+....+++++.+. +..+|..++|..
T Consensus 71 ~D~Vi-lavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 71 QDVVI-VAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CSEEE-ECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCEEE-EeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 89877 5554346678888887 467899999984
No 164
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.73 E-value=0.55 Score=48.68 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=61.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC-C
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS-G 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~-g 273 (766)
.||.|+|+|..|..+|..|.+.|. +++++|++ . +.....+..= -....++.|+++++|++| ++.+ .
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~---~V~~~dr~----~---~~~~~~~~~g--~~~~~~~~~~~~~aDvvi-~~vp~~ 68 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC---SVTIWNRS----P---EKAEELAALG--AERAATPCEVVESCPVTF-AMLADP 68 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS----G---GGGHHHHHTT--CEECSSHHHHHHHCSEEE-ECCSSH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC---eEEEEcCC----H---HHHHHHHHCC--CeecCCHHHHHhcCCEEE-EEcCCH
Confidence 489999999999999999999995 48888873 1 1223322211 122468999999999877 4443 2
Q ss_pred CCCHHHH-------HhhccCcEEEeccCCCCcc
Q psy14495 274 VLKKEMV-------LQMAKNPIILALANPLPEI 299 (766)
Q Consensus 274 ~ft~evv-------~~M~~~PiIfaLsNPt~E~ 299 (766)
.-.++++ ..+.+..+|.-+|+-.|+.
T Consensus 69 ~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~ 101 (287)
T 3pef_A 69 AAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPAT 101 (287)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHH
T ss_pred HHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHH
Confidence 2334444 4455677888888765543
No 165
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.64 E-value=0.32 Score=50.03 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=34.8
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|++.||+|+|+|..|..++..|...|+. +|.++|.+=
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d~ 62 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDD 62 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCB
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCCC
Confidence 57788999999999999999999999997 899999873
No 166
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.56 E-value=0.14 Score=54.13 Aligned_cols=93 Identities=16% Similarity=0.234 Sum_probs=56.1
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc------ccC--CCCHHHHhccCcEEE
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK------DTT--ARTLSDIIPNADIFL 267 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~------~~~--~~~L~e~i~~~~vli 267 (766)
||.|+|||+.|.++|..|...|.- .+++++|.+- ++ +......+.+ ... ..+ .++++++|++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~-~eV~L~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVI 72 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSC-SELVLVDRDE----DR---AQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVI 72 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSH----HH---HHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCCH----HH---HHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEE
Confidence 899999999999999999988863 3699999852 11 1111111111 100 123 46789999876
Q ss_pred ecCC-CCC--------------CCHHHHHhhc---cCcEEEeccCCCC
Q psy14495 268 GLSV-SGV--------------LKKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 268 G~S~-~g~--------------ft~evv~~M~---~~PiIfaLsNPt~ 297 (766)
=+-. +.. .-+++.+.|. ++-+|+-.|||..
T Consensus 73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD 120 (304)
T ss_dssp ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH
T ss_pred EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH
Confidence 3322 211 1145555554 5667777899964
No 167
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=87.53 E-value=6.1 Score=41.92 Aligned_cols=144 Identities=16% Similarity=0.146 Sum_probs=89.7
Q ss_pred CchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHH----HHHcCCCCcc
Q psy14495 148 PECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDL----IIDLGFPLQN 222 (766)
Q Consensus 148 ~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~----l~~~g~~~~~ 222 (766)
+.+.+.+.+|- ++||.| .+.+-.-.=+|+=++.-.+..| +++..||+++|-|.. -+++. +...|+.
T Consensus 105 ~~~~~~lA~~~---~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~--rva~Sl~~~~~~~g~~--- 175 (307)
T 2i6u_A 105 QERLDAMASVA---TVPVINALSDEFHPCQVLADLQTIAERKG-ALRGLRLSYFGDGAN--NMAHSLLLGGVTAGIH--- 175 (307)
T ss_dssp HHHHHHHHHHC---SSCEEESCCSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTS--HHHHHHHHHHHHTTCE---
T ss_pred hhHHHHHHhhC---CCCEEcCCCCCcCccHHHHHHHHHHHHhC-CcCCeEEEEECCCCc--CcHHHHHHHHHHCCCE---
Confidence 44445555555 589999 2233344556777776666554 799999999999822 33333 3456875
Q ss_pred EEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC---C--------------CCCCHHHH
Q psy14495 223 IFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV---S--------------GVLKKEMV 280 (766)
Q Consensus 223 i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~---~--------------g~ft~evv 280 (766)
++++-.+|+.-. +.+-..-+.+|+.. ...++.|+++++||+.-..+ + --+|++.+
T Consensus 176 v~~~~P~~~~~~---~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l 252 (307)
T 2i6u_A 176 VTVAAPEGFLPD---PSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLL 252 (307)
T ss_dssp EEEECCTTSCCC---HHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHH
T ss_pred EEEECCccccCC---HHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHH
Confidence 999999887321 11111122333322 24689999999999987543 1 13678888
Q ss_pred HhhccCcEEEeccCCC---CccCHhhH
Q psy14495 281 LQMAKNPIILALANPL---PEILPEDI 304 (766)
Q Consensus 281 ~~M~~~PiIfaLsNPt---~E~~pe~a 304 (766)
+.+.++-||+- .-|- -|++.|-.
T Consensus 253 ~~a~~~ai~mH-~lP~~Rg~EI~~eV~ 278 (307)
T 2i6u_A 253 ALADSDAIVLH-CLPAHRGDEITDAVM 278 (307)
T ss_dssp HHSCTTCEEEE-CSCCCBTTTBCHHHH
T ss_pred hhcCCCcEEEC-CCCCCCCcccCHhHh
Confidence 77766666664 4453 38887643
No 168
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=87.52 E-value=1.1 Score=49.78 Aligned_cols=131 Identities=14% Similarity=0.206 Sum_probs=80.4
Q ss_pred hhHHHHh-hhcCCC------ccccCCCCCC---HHHHHH-HHHHhCCCccc---cccccCCCCchHH---HHHHHhhcCC
Q psy14495 100 GKAVLFK-KFAGID------VFDLEINETD---PDKLCD-IIFSLEPTFGG---INLEDIKAPECFY---IEKKLRNHMK 162 (766)
Q Consensus 100 gK~~ly~-~~~gi~------~l~v~~~~~~---~~~~v~-~v~~~~p~~g~---i~~ED~~~~~af~---il~~~~~~~~ 162 (766)
++++-|| ++.|+. .+++.-...+ .+.|.+ +++.+.+-.|. |-=+|++.. ..+ +.+.|.+..+
T Consensus 86 a~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~ 164 (419)
T 1gtm_A 86 AAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISR 164 (419)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhC
Confidence 5666665 456665 2333111122 333444 46666665542 566677653 222 3455533111
Q ss_pred --Cc---EEec----------CCchhHHHHHHHHHHHHhHhCCc-CCCceEEEECcchhhHHHHHHHHH-cCCCCccEEE
Q psy14495 163 --IP---VFHD----------DQHGTAIIVGSAILNGLKLVKKK-MKDCKLVVSGAGAAALACLDLIID-LGFPLQNIFV 225 (766)
Q Consensus 163 --~~---~fnD----------D~qGTa~v~lA~ll~al~~~~~~-l~d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~ 225 (766)
.| ++-- .-.-||-=+.-++-.+++..|.+ |+..++.|+|.|..|..+|+++.+ .|++ ++-
T Consensus 165 ~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~k---Vv~ 241 (419)
T 1gtm_A 165 RKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMK---VVA 241 (419)
T ss_dssp TSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCE---EEE
T ss_pred CCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCE---EEE
Confidence 12 2222 12346666666778888899999 999999999999999999999999 9987 554
Q ss_pred E-cCCccccC
Q psy14495 226 T-DLAGVLYK 234 (766)
Q Consensus 226 ~-D~~Glv~~ 234 (766)
+ |+.|-++.
T Consensus 242 ~sD~~g~~~~ 251 (419)
T 1gtm_A 242 VSDSKGGIYN 251 (419)
T ss_dssp EECSSCEEEE
T ss_pred EeCCCccccC
Confidence 4 88775543
No 169
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=87.47 E-value=5.9 Score=42.18 Aligned_cols=163 Identities=15% Similarity=0.123 Sum_probs=98.5
Q ss_pred HHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcc
Q psy14495 126 LCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAG 203 (766)
Q Consensus 126 ~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG 203 (766)
+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| +++..||+++|-|
T Consensus 91 l~DTarvls~~~D~iviR~~~-~~~~~~lA~~~---~vPVINa~~~-~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~ 164 (315)
T 1pvv_A 91 IADTARVLSRYVDAIMARVYD-HKDVEDLAKYA---TVPVINGLSD-FSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG 164 (315)
T ss_dssp HHHHHHHHTTTCSEEEEECSS-HHHHHHHHHHC---SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC
T ss_pred HHHHHHHHHHhCcEEEEecCc-hHHHHHHHHhC---CCCEEcCCCC-CCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC
Confidence 334444333223235444443 44455555555 589999 44 5556677888877666665 7999999999997
Q ss_pred hhhHHHHHHH----HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC---
Q psy14495 204 AAALACLDLI----IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV--- 271 (766)
Q Consensus 204 ~ag~gia~~l----~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~--- 271 (766)
. -+++.+ ...|+. ++++-.+|+.-. +.+-+.-+.+|+.. ...++.|+++++||+.-..+
T Consensus 165 -~--rva~Sl~~~~~~~g~~---v~~~~P~~~~~~---~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~sm 235 (315)
T 1pvv_A 165 -N--NVAHSLMIAGTKLGAD---VVVATPEGYEPD---EKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASM 235 (315)
T ss_dssp -C--HHHHHHHHHHHHTTCE---EEEECCTTCCCC---HHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCS
T ss_pred -c--chHHHHHHHHHHCCCE---EEEECCccccCC---HHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceecc
Confidence 3 344443 356875 999999887321 11111122333322 24789999999999887543
Q ss_pred C--------------CCCCHHHHHhhccCcEEEeccCCC---CccCHhhH
Q psy14495 272 S--------------GVLKKEMVLQMAKNPIILALANPL---PEILPEDI 304 (766)
Q Consensus 272 ~--------------g~ft~evv~~M~~~PiIfaLsNPt---~E~~pe~a 304 (766)
+ --+|++.++.+.++-||+- .-|- -|++.|-.
T Consensus 236 g~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH-~lP~~Rg~EI~~eV~ 284 (315)
T 1pvv_A 236 GQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMH-CLPAHRGEEVTDDVI 284 (315)
T ss_dssp STTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEE-CSCCCBTTTBCHHHH
T ss_pred CcccchHHHHHHHHhcCCCHHHHhhcCCCcEEEC-CCCCCCCCccCHHHh
Confidence 1 1357777766666666654 4453 48887643
No 170
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=87.46 E-value=0.41 Score=52.72 Aligned_cols=85 Identities=13% Similarity=0.229 Sum_probs=52.9
Q ss_pred ceEEEECcchhhHHHHHHHHHcCC--C-----CccEEEEcCCc-------cccCCCC--CCCcHHHHHhccccC---CCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGF--P-----LQNIFVTDLAG-------VLYKGRS--ELMDSNKARFIKDTT---ART 255 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~--~-----~~~i~~~D~~G-------lv~~~r~--~~l~~~k~~~a~~~~---~~~ 255 (766)
.||.|+|||+=|+++|..|.+.|- . .=++|..|.+= .+.+.|. .-|+..+. +.+ ..+
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~L----p~~i~~t~d 110 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL----PDNLVANPD 110 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCC----CSSEEEESC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcC----CCCcEEeCC
Confidence 499999999999999999987642 1 11477665431 1222221 00221111 111 258
Q ss_pred HHHHhccCcEEEecCCCCCCCHHHHHhhc
Q psy14495 256 LSDIIPNADIFLGLSVSGVLKKEMVLQMA 284 (766)
Q Consensus 256 L~e~i~~~~vliG~S~~g~ft~evv~~M~ 284 (766)
|.|+++++|++| +..|-.+.+++++.+.
T Consensus 111 l~~al~~ad~ii-~avPs~~~r~~l~~l~ 138 (391)
T 4fgw_A 111 LIDSVKDVDIIV-FNIPHQFLPRICSQLK 138 (391)
T ss_dssp HHHHHTTCSEEE-ECSCGGGHHHHHHHHT
T ss_pred HHHHHhcCCEEE-EECChhhhHHHHHHhc
Confidence 999999998876 4444457788888887
No 171
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.10 E-value=0.55 Score=50.80 Aligned_cols=99 Identities=14% Similarity=0.237 Sum_probs=61.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCC-C---ccEEEEcCCccccCCCCCCCcHHHHH-----hccc-------cCCCCHHH
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFP-L---QNIFVTDLAGVLYKGRSELMDSNKAR-----FIKD-------TTARTLSD 258 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~-~---~~i~~~D~~Glv~~~r~~~l~~~k~~-----~a~~-------~~~~~L~e 258 (766)
.||.|+|+|..|.++|..|.+.|.. + .+++++|+..-+. .+ ......+.. |-.. .-..++.|
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVN-GE-RMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC----C-CHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhh-hH-HHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 4899999999999999999988821 1 3699998753210 01 011111110 1000 01246888
Q ss_pred HhccCcEEEecCCCCCCCHHHHHhhcc--------CcEEEeccCCC
Q psy14495 259 IIPNADIFLGLSVSGVLKKEMVLQMAK--------NPIILALANPL 296 (766)
Q Consensus 259 ~i~~~~vliG~S~~g~ft~evv~~M~~--------~PiIfaLsNPt 296 (766)
+++.+|++| ++.+....+++++.+.+ ..+|..++|-.
T Consensus 100 a~~~aDvVi-lav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 100 VINDADLLI-FIVPCQYLESVLASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSC
T ss_pred HHcCCCEEE-EcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcc
Confidence 999999876 45444466777776654 55888899864
No 172
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.07 E-value=0.57 Score=50.03 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=59.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCC----CCcHHHHHhccccC---CCCHHHHhccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSE----LMDSNKARFIKDTT---ARTLSDIIPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~----~l~~~k~~~a~~~~---~~~L~e~i~~~~vli 267 (766)
.||.|+|||+.|.++|.+|...|+- +++|+|.+ .++-+ ++.+...+...... ..++ ++++++|++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi 77 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVI 77 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEE
Confidence 4899999999999999999999984 39999974 11100 01111011111111 1467 8899999876
Q ss_pred ecC---C-CCC----------------CCHHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 268 GLS---V-SGV----------------LKKEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 268 G~S---~-~g~----------------ft~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
=+- . +|. +-+++.+.+. ++-+|+-.|||..-.
T Consensus 78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~ 132 (322)
T 1t2d_A 78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM 132 (322)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH
T ss_pred EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH
Confidence 332 2 332 2344555554 566766679997543
No 173
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=86.88 E-value=0.65 Score=52.43 Aligned_cols=118 Identities=18% Similarity=0.269 Sum_probs=67.9
Q ss_pred CceEEEECcchhh--HHHHHHHHH-cCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc----cc---CCCCHHHHhccC
Q psy14495 194 DCKLVVSGAGAAA--LACLDLIID-LGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----DT---TARTLSDIIPNA 263 (766)
Q Consensus 194 d~~iv~~GaG~ag--~gia~~l~~-~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----~~---~~~~L~e~i~~~ 263 (766)
..||.|+|||+.| .++|..|.. .++.-..++|+|.+- ++.+.+......+.. .. -..++.++++++
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dA 78 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDA 78 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCC
Confidence 4699999999964 555777764 344334799999853 110111111122211 11 125788999999
Q ss_pred cEEEecCC----------------CCCCC-------------------------HHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 264 DIFLGLSV----------------SGVLK-------------------------KEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 264 ~vliG~S~----------------~g~ft-------------------------~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
|++|=... .|.+. .++++.|. ++-+|+-.|||...+
T Consensus 79 D~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~ 158 (480)
T 1obb_A 79 DFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEG 158 (480)
T ss_dssp SEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHH
T ss_pred CEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence 98763321 13322 35555555 689999999998644
Q ss_pred CHhhHhcccCcEEEEcC
Q psy14495 300 LPEDIKSVRNDAIIATG 316 (766)
Q Consensus 300 ~pe~a~~~~~~ai~atG 316 (766)
|- -+.+....-+|++|
T Consensus 159 t~-~~~k~p~~rviG~c 174 (480)
T 1obb_A 159 TT-LVTRTVPIKAVGFC 174 (480)
T ss_dssp HH-HHHHHSCSEEEEEC
T ss_pred HH-HHHHCCCCcEEecC
Confidence 32 23334444566665
No 174
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.86 E-value=0.56 Score=49.71 Aligned_cols=93 Identities=14% Similarity=0.235 Sum_probs=58.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHH------HHhc-ccc---CCCCHHHHhccCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNK------ARFI-KDT---TARTLSDIIPNAD 264 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k------~~~a-~~~---~~~~L~e~i~~~~ 264 (766)
.||.|+|||+.|.++|..|...|+. +++++|.+- ++ +.... ..+. ... ...++ ++++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aD 74 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSD 74 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCC
Confidence 5899999999999999999999974 499999852 11 21111 1111 111 11456 7899999
Q ss_pred EEEecC-C---CCC-----------CCHHHHHhhc---cCcEEEeccCCCC
Q psy14495 265 IFLGLS-V---SGV-----------LKKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 265 vliG~S-~---~g~-----------ft~evv~~M~---~~PiIfaLsNPt~ 297 (766)
++|=+- . +|. +.+++++.+. +.-+|+-.|||..
T Consensus 75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 865332 1 221 1234444444 5778888999863
No 175
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=86.78 E-value=11 Score=39.77 Aligned_cols=160 Identities=14% Similarity=0.120 Sum_probs=94.0
Q ss_pred HHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcch
Q psy14495 126 LCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGA 204 (766)
Q Consensus 126 ~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ 204 (766)
+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||.| .|.+-.-.=+|+=++.-.+..| +++..||+++|-|
T Consensus 90 l~DTarvls~~~D~iviR~~~-~~~~~~la~~~---~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~ia~vGD~- 163 (301)
T 2ef0_A 90 VRDVAKNLERFVEGIAARVFR-HETVEALARHA---KVPVVNALSDRAHPLQALADLLTLKEVFG-GLAGLEVAWVGDG- 163 (301)
T ss_dssp HHHHHHHHTTTCSEEEEECSS-HHHHHHHHHHC---SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-
T ss_pred hHHHHHHHHHhCCEEEEecCC-hHHHHHHHHHC---CCCEEeCCCCccCchHHHHHHHHHHHHhC-CcCCcEEEEECCC-
Confidence 334443333223234444443 44445555555 589999 2233344556777776666555 7999999999997
Q ss_pred hhHHHHHH----HHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCC---C-----
Q psy14495 205 AALACLDL----IIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSV---S----- 272 (766)
Q Consensus 205 ag~gia~~----l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~---~----- 272 (766)
. -+++. +...|+. ++++-.+|+.- ++.-..+++-+...++.|+++++||+.-..+ +
T Consensus 164 ~--rva~Sl~~~~~~~g~~---v~~~~P~~~~~-------~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~ 231 (301)
T 2ef0_A 164 N--NVLNSLLEVAPLAGLK---VRVATPKGYEP-------DPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAER 231 (301)
T ss_dssp C--HHHHHHHHHHHHHTCE---EEEECCTTCCC-------CHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------
T ss_pred c--hhHHHHHHHHHHcCCE---EEEECCchhcC-------CHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccch
Confidence 3 34443 3356875 99988888732 2322233332334689999999999887543 1
Q ss_pred ---------CCCCHHHHHhhccCcEEEeccCCC---CccCHhhH
Q psy14495 273 ---------GVLKKEMVLQMAKNPIILALANPL---PEILPEDI 304 (766)
Q Consensus 273 ---------g~ft~evv~~M~~~PiIfaLsNPt---~E~~pe~a 304 (766)
--+|+|.++.+.++-||+- .-|- -|++.|-.
T Consensus 232 ~~~~~~~~~y~v~~e~l~~a~~~ai~mH-plP~~Rg~EI~~eV~ 274 (301)
T 2ef0_A 232 EKRLRDFQGFQVNGELLKLLRPEGVFLH-CLPAHYGEETTEEAV 274 (301)
T ss_dssp CHHHHHTTTCCBCHHHHTTSCTTCEEEE-CSCCCBTTTBCHHHH
T ss_pred hHHHHHhhccccCHHHHHhcCCCcEEEC-CCCCCCCCccCHHHh
Confidence 1245666655555555553 3442 48887643
No 176
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.78 E-value=0.82 Score=48.38 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=56.9
Q ss_pred hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc--------ccC---CCCH
Q psy14495 188 VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK--------DTT---ARTL 256 (766)
Q Consensus 188 ~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~--------~~~---~~~L 256 (766)
+.-.....||.|+|+|+-|..+|..|.+.|.. ++++ .+. +.+...++.-.. ... ..++
T Consensus 13 ~~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~---V~l~-~~~-------~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~ 81 (318)
T 3hwr_A 13 ENLYFQGMKVAIMGAGAVGCYYGGMLARAGHE---VILI-ARP-------QHVQAIEATGLRLETQSFDEQVKVSASSDP 81 (318)
T ss_dssp -------CEEEEESCSHHHHHHHHHHHHTTCE---EEEE-CCH-------HHHHHHHHHCEEEECSSCEEEECCEEESCG
T ss_pred hhhhccCCcEEEECcCHHHHHHHHHHHHCCCe---EEEE-EcH-------hHHHHHHhCCeEEEcCCCcEEEeeeeeCCH
Confidence 34456778999999999999999999998853 6655 321 111111111000 000 1344
Q ss_pred HHHhccCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 257 SDIIPNADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 257 ~e~i~~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
. .++.+|++| ++.+-...+++++.+. +..+|..++|.-
T Consensus 82 ~-~~~~~D~vi-lavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi 123 (318)
T 3hwr_A 82 S-AVQGADLVL-FCVKSTDTQSAALAMKPALAKSALVLSLQNGV 123 (318)
T ss_dssp G-GGTTCSEEE-ECCCGGGHHHHHHHHTTTSCTTCEEEEECSSS
T ss_pred H-HcCCCCEEE-EEcccccHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 4 357789876 5554346788998887 456888899986
No 177
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.77 E-value=0.32 Score=49.97 Aligned_cols=38 Identities=21% Similarity=0.417 Sum_probs=34.4
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|++.||+|+|+|..|..++..|...|+. +|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCC
Confidence 46677999999999999999999999987 899999974
No 178
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=86.76 E-value=0.45 Score=53.29 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=43.3
Q ss_pred CCCceEEEECcchh--hHHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcc----ccCCCCHHHHhccCc
Q psy14495 192 MKDCKLVVSGAGAA--ALACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----DTTARTLSDIIPNAD 264 (766)
Q Consensus 192 l~d~~iv~~GaG~a--g~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----~~~~~~L~e~i~~~~ 264 (766)
++..||+|+|||+. |.+++..|... .+. .+++|+|.+- ++-+.+......+.+ -+-..++.||++++|
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMS-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCC-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCS
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccC-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCC
Confidence 45679999999996 68999888763 222 2799999851 110001111111111 011358999999999
Q ss_pred EEE
Q psy14495 265 IFL 267 (766)
Q Consensus 265 vli 267 (766)
++|
T Consensus 78 fVI 80 (450)
T 3fef_A 78 IVI 80 (450)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 179
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.61 E-value=0.63 Score=47.28 Aligned_cols=90 Identities=16% Similarity=0.204 Sum_probs=60.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGV 274 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~ 274 (766)
.||.|+|+|..|..++..|.+.| .+++++|++- +........|- -....++.|+++++|++| ++.+..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g---~~v~~~~~~~-------~~~~~~~~~~g-~~~~~~~~~~~~~~D~Vi-~~v~~~ 71 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP---HELIISGSSL-------ERSKEIAEQLA-LPYAMSHQDLIDQVDLVI-LGIKPQ 71 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS---CEEEEECSSH-------HHHHHHHHHHT-CCBCSSHHHHHHTCSEEE-ECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHhCC---CeEEEECCCH-------HHHHHHHHHcC-CEeeCCHHHHHhcCCEEE-EEeCcH
Confidence 48999999999999999998888 2688888731 11222222221 112357889999999877 444344
Q ss_pred CCHHHHHhhccCcEEEeccCCC
Q psy14495 275 LKKEMVLQMAKNPIILALANPL 296 (766)
Q Consensus 275 ft~evv~~M~~~PiIfaLsNPt 296 (766)
..+++++.+.+..+|.-+++-.
T Consensus 72 ~~~~v~~~l~~~~~vv~~~~~~ 93 (259)
T 2ahr_A 72 LFETVLKPLHFKQPIISMAAGI 93 (259)
T ss_dssp GHHHHHTTSCCCSCEEECCTTC
T ss_pred hHHHHHHHhccCCEEEEeCCCC
Confidence 5678888887666777665543
No 180
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.57 E-value=1.3 Score=46.56 Aligned_cols=96 Identities=19% Similarity=0.168 Sum_probs=58.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCc--HHHHHhc-cccC-CCCHHHHhccCcEEEecC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMD--SNKARFI-KDTT-ARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~--~~k~~~a-~~~~-~~~L~e~i~~~~vliG~S 270 (766)
.||.|+|+|+-|..+|..|.+.|. +++++|+.-+ ..=+..+++ .....+- +... ..++. .++.+|++| ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~vi-la 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDLVL-VG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSEEE-EC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCEEE-Ee
Confidence 589999999999999999999885 4888887431 000000000 0000000 0000 12444 367789877 66
Q ss_pred CCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 271 VSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 271 ~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
.+...++++++.++ +..+|..+.|--
T Consensus 77 vk~~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 77 LKTFANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp CCGGGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred cCCCCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 64445668888887 467888899975
No 181
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=86.50 E-value=4.5 Score=43.50 Aligned_cols=123 Identities=13% Similarity=0.142 Sum_probs=76.9
Q ss_pred ccccccCCCCchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHH--HHHHHHH
Q psy14495 139 GINLEDIKAPECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALA--CLDLIID 215 (766)
Q Consensus 139 ~i~~ED~~~~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~g--ia~~l~~ 215 (766)
.|-+-.++ +.+.+.+.+|- ++||+| .|.+-.-.=+||=++.-.+..|++++..||+++|-|...++ .+..+..
T Consensus 103 ~IviR~~~-~~~~~~lA~~s---~vPVINa~~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~ 178 (335)
T 1dxh_A 103 AIEYRGFK-QEIVEELAKFA---GVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAK 178 (335)
T ss_dssp EEEEECSC-HHHHHHHHHHS---SSCEEEEECSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHH
T ss_pred EEEEecCC-hhHHHHHHHhC---CCCEEcCCCCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHH
Confidence 35444443 44455555665 599999 22334455677888777666666899999999999832222 2223345
Q ss_pred cCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 216 LGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 216 ~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
.|+. +.++-.+|+--. +.+-..-+.+|+.. ...++.|+++++||+.-..+
T Consensus 179 ~G~~---v~~~~P~~~~p~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 179 LGMD---VRIAAPKALWPH---DEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVW 233 (335)
T ss_dssp TTCE---EEEECCGGGSCC---HHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCC
T ss_pred cCCE---EEEECCcccCCC---HHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCc
Confidence 6875 999999887431 11212223333322 24689999999999987654
No 182
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=86.15 E-value=1.5 Score=47.44 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=67.9
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHH-cCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc--c---cC
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIID-LGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK--D---TT 252 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~--~---~~ 252 (766)
++.+++..+. +....++.|+|+|..|-.++..|.. .++. +++++|+. . +........|.. . ..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~~~~~--~V~V~~r~----~---~~a~~la~~~~~~~g~~~~~ 184 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKHLGIE--EIVAYDTD----P---LATAKLIANLKEYSGLTIRR 184 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHHSCCC--EEEEECSS----H---HHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHhCCCc--EEEEEcCC----H---HHHHHHHHHHHhccCceEEE
Confidence 3455555543 2456799999999999999887764 4544 79988873 1 123333334421 1 12
Q ss_pred CCCHHHHhccCcEEEecCCCC----CCCHHHHHhhccCcEEEeccC--CCC-ccCHh
Q psy14495 253 ARTLSDIIPNADIFLGLSVSG----VLKKEMVLQMAKNPIILALAN--PLP-EILPE 302 (766)
Q Consensus 253 ~~~L~e~i~~~~vliG~S~~g----~ft~evv~~M~~~PiIfaLsN--Pt~-E~~pe 302 (766)
..++.|+++++|+++=+...+ .|+.++ +.+.-.|+.++- |.+ |+.++
T Consensus 185 ~~~~~eav~~aDiVi~aTps~~~~pvl~~~~---l~~G~~V~~vgs~~p~~~El~~~ 238 (350)
T 1x7d_A 185 ASSVAEAVKGVDIITTVTADKAYATIITPDM---LEPGMHLNAVGGDCPGKTELHAD 238 (350)
T ss_dssp CSSHHHHHTTCSEEEECCCCSSEEEEECGGG---CCTTCEEEECSCCBTTBEEECHH
T ss_pred eCCHHHHHhcCCEEEEeccCCCCCceecHHH---cCCCCEEEECCCCCCCceeeCHH
Confidence 368999999999988654433 233332 224557787776 333 77665
No 183
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=86.09 E-value=0.53 Score=50.23 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=29.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.||+|+|||.||+.+|..|.+.|++ +.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecC
Confidence 5899999999999999999999987 8888875
No 184
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.96 E-value=0.75 Score=48.66 Aligned_cols=93 Identities=26% Similarity=0.424 Sum_probs=55.9
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-------cc---CCCCHHHHhccCcE
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-------DT---TARTLSDIIPNADI 265 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-------~~---~~~~L~e~i~~~~v 265 (766)
||.|+|||..|.++|..|...|+- .+++++|.+- ++ +......+.+ .. ...++.+ ++++|+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g-~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDv 72 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLA-RELVLLDVVE----GI---PQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDI 72 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSS----SH---HHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCCh----hH---HHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCE
Confidence 799999999999999999886532 3699999852 11 1111111111 11 1145655 899998
Q ss_pred EEec-CC---CCCC-------C----HHHHHhhc---cCcEEEeccCCCC
Q psy14495 266 FLGL-SV---SGVL-------K----KEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 266 liG~-S~---~g~f-------t----~evv~~M~---~~PiIfaLsNPt~ 297 (766)
+|=+ .. +|-. | +++.+.|. ++.+|+-.+||.-
T Consensus 73 Viiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 73 VIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLD 122 (310)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchH
Confidence 6532 22 2321 1 34444443 5778888899964
No 185
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.91 E-value=1 Score=46.58 Aligned_cols=89 Identities=18% Similarity=0.239 Sum_probs=59.1
Q ss_pred ceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 195 CKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 195 ~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.||.|+|+ |..|..++..|.+.|. +++++|++- +.+...+. + .-...++.++++.+|++| ++.+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~~-------~~~~~~~~-~--g~~~~~~~~~~~~aDvVi-~av~~ 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH---HLAAIEIAP-------EGRDRLQG-M--GIPLTDGDGWIDEADVVV-LALPD 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCSH-------HHHHHHHH-T--TCCCCCSSGGGGTCSEEE-ECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCH-------HHHHHHHh-c--CCCcCCHHHHhcCCCEEE-EcCCc
Confidence 48999999 9999999999999985 588888631 11122211 1 111236778888999877 44422
Q ss_pred CCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 274 VLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
...+++++.+. +..+|.-+|+..+
T Consensus 78 ~~~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp HHHHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred hHHHHHHHHHHHhCCCCCEEEECCCCch
Confidence 22577777765 4567877888653
No 186
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.91 E-value=0.56 Score=52.87 Aligned_cols=102 Identities=18% Similarity=0.308 Sum_probs=63.3
Q ss_pred CceEEEECcchh-hHHHHHHHHHc--CCCCccEEEEcCCccccCCCCCCCcHHHHHhc-c---ccC---CCCHHHHhccC
Q psy14495 194 DCKLVVSGAGAA-ALACLDLIIDL--GFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-K---DTT---ARTLSDIIPNA 263 (766)
Q Consensus 194 d~~iv~~GaG~a-g~gia~~l~~~--g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-~---~~~---~~~L~e~i~~~ 263 (766)
..||.|+|||+. +.++|..|... +++-..++|+|.+- ++.+.+.+....+. . ... ..++.++++++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~A 103 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDV 103 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCC
Confidence 469999999997 55568777776 77555899999853 11111122222221 1 111 25899999999
Q ss_pred cEEEecCCC-C---------------C-------------------CCHHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 264 DIFLGLSVS-G---------------V-------------------LKKEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 264 ~vliG~S~~-g---------------~-------------------ft~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
|++|=.... + . .-.++++.|. ++-+|+-.|||..-+
T Consensus 104 D~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~ 177 (472)
T 1u8x_X 104 DFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIV 177 (472)
T ss_dssp SEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHH
T ss_pred CEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence 987633321 1 0 1235555555 689999999998543
No 187
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.66 E-value=1.6 Score=45.80 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=62.6
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S 270 (766)
.+...||.|+|.|..|.++|..|.+.|.. ++++|++- +........= -....++.|+++++|++| ++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~---V~~~dr~~-------~~~~~~~~~g--~~~~~~~~e~~~~aDvVi-~~ 72 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKR---VAIWNRSP-------GKAAALVAAG--AHLCESVKAALSASPATI-FV 72 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSH-------HHHHHHHHHT--CEECSSHHHHHHHSSEEE-EC
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH-------HHHHHHHHCC--CeecCCHHHHHhcCCEEE-EE
Confidence 34567999999999999999999999975 88888631 1111211110 122468999999999877 34
Q ss_pred CC-CCCCHHHH-----HhhccCcEEEeccCCCCccC
Q psy14495 271 VS-GVLKKEMV-----LQMAKNPIILALANPLPEIL 300 (766)
Q Consensus 271 ~~-g~ft~evv-----~~M~~~PiIfaLsNPt~E~~ 300 (766)
.+ ..-.++++ ..+.+..+|.-+|+-.|+.+
T Consensus 73 vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~ 108 (306)
T 3l6d_A 73 LLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEG 108 (306)
T ss_dssp CSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHH
T ss_pred eCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHH
Confidence 32 21123333 33456778888887656443
No 188
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.64 E-value=0.8 Score=48.20 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=66.0
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG- 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g- 273 (766)
+||-|+|-|..|.++|.-|.+.|.+ ++++|+. .++.+.+ +..-+ ....++.|+++.+|++|=+-..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~---V~v~dr~----~~~~~~l---~~~G~--~~~~s~~e~~~~~dvvi~~l~~~~ 73 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYE---LVVWNRT----ASKAEPL---TKLGA--TVVENAIDAITPGGIVFSVLADDA 73 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCE---EEEC-----------CTT---TTTTC--EECSSGGGGCCTTCEEEECCSSHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCe---EEEEeCC----HHHHHHH---HHcCC--eEeCCHHHHHhcCCceeeeccchh
Confidence 5899999999999999999999976 8888862 2221112 11111 23468999999999887432211
Q ss_pred ----CCCHHHHHhhccCcEEEeccCCCCccCHhhHh
Q psy14495 274 ----VLKKEMVLQMAKNPIILALANPLPEILPEDIK 305 (766)
Q Consensus 274 ----~ft~evv~~M~~~PiIfaLsNPt~E~~pe~a~ 305 (766)
.+..+++..+.+.-||.=+|+=.|+.+-+-+.
T Consensus 74 ~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~ 109 (297)
T 4gbj_A 74 AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQ 109 (297)
T ss_dssp HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHH
Confidence 45566777788888999999877766555443
No 189
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.54 E-value=1.1 Score=47.46 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=58.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccCCC-CHHHHhccCcEEEecCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTTAR-TLSDIIPNADIFLGLSVS 272 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~-~L~e~i~~~~vliG~S~~ 272 (766)
.||.|+|+|..|.++|..|.+.|. .+++++|++- +..+...+....+.. .. .. ++.|+++++|++| ++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~--~~V~~~dr~~----~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi-~avp 96 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNA--ARLAAYDLRF----NDPAASGALRARAAELGV-EPLDDVAGIACADVVL-SLVV 96 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC--SEEEEECGGG----GCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEE-ECCC
T ss_pred CeEEEECccHHHHHHHHHHHHcCC--CeEEEEeCCC----ccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEE-EecC
Confidence 589999999999999999999992 2589999842 100111122222211 11 34 7889999999876 3432
Q ss_pred CCCCHHHHHh----hccCcEEEeccCCCC
Q psy14495 273 GVLKKEMVLQ----MAKNPIILALANPLP 297 (766)
Q Consensus 273 g~ft~evv~~----M~~~PiIfaLsNPt~ 297 (766)
.....+.++. +.+..+|.-+|+=.|
T Consensus 97 ~~~~~~~~~~i~~~l~~~~ivv~~st~~p 125 (317)
T 4ezb_A 97 GAATKAVAASAAPHLSDEAVFIDLNSVGP 125 (317)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECCSCCH
T ss_pred CHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 2222333444 346678888885333
No 190
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.52 E-value=1.8 Score=46.79 Aligned_cols=91 Identities=16% Similarity=0.247 Sum_probs=62.0
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccC---cEE
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNA---DIF 266 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~---~vl 266 (766)
++..||.|+|.|..|..+|..|.+.|.. ++++|+.- +.-..++.. ....++.|+++.+ |++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~---V~v~dr~~-----------~~~~~l~~~g~~~~~s~~e~~~~a~~~DvV 85 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHE---CVVYDLNV-----------NAVQALEREGIAGARSIEEFCAKLVKPRVV 85 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH-----------HHHHHHHTTTCBCCSSHHHHHHHSCSSCEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCE---EEEEeCCH-----------HHHHHHHHCCCEEeCCHHHHHhcCCCCCEE
Confidence 4567999999999999999999999954 88888631 111122221 2236899999887 987
Q ss_pred EecCC-CCCCCHHHHHhhc----cCcEEEeccCCCCc
Q psy14495 267 LGLSV-SGVLKKEMVLQMA----KNPIILALANPLPE 298 (766)
Q Consensus 267 iG~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~E 298 (766)
| ++. .+ -.+++++.+. +.-||.-+||-.++
T Consensus 86 i-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~ 120 (358)
T 4e21_A 86 W-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQ 120 (358)
T ss_dssp E-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHH
T ss_pred E-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChH
Confidence 6 343 23 6667776654 56788888886553
No 191
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.45 E-value=1.1 Score=46.87 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=59.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC-C
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS-G 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~-g 273 (766)
.||.|+|+|..|..+|..|.+.|. +++++|++. +.....+..-+ .-..++.|+++.+|++| ++.+ .
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~---~V~~~~~~~-------~~~~~~~~~g~--~~~~~~~~~~~~~DvVi-~av~~~ 97 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH---TVTVWNRTA-------EKCDLFIQEGA--RLGRTPAEVVSTCDITF-ACVSDP 97 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSG-------GGGHHHHHTTC--EECSCHHHHHHHCSEEE-ECCSSH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC---EEEEEeCCH-------HHHHHHHHcCC--EEcCCHHHHHhcCCEEE-EeCCCH
Confidence 689999999999999999999886 488888731 12222222101 12347889999999876 3333 2
Q ss_pred CCCHHHHHh-------hccCcEEEeccCCCC
Q psy14495 274 VLKKEMVLQ-------MAKNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~~-------M~~~PiIfaLsNPt~ 297 (766)
.-.++++.. +.+..+|+-+||-.+
T Consensus 98 ~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~ 128 (316)
T 2uyy_A 98 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDA 128 (316)
T ss_dssp HHHHHHHHSTTCGGGGCCTTCEEEECSCCCH
T ss_pred HHHHHHHcCchhHhhcCCCCCEEEECCCCCH
Confidence 334556543 346678888998544
No 192
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.45 E-value=1.5 Score=45.57 Aligned_cols=92 Identities=18% Similarity=0.278 Sum_probs=60.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC-C
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS-G 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~-g 273 (766)
.||.|+|+|..|.++|..|.+.|. +++++|++- +.+...+.. .-....++.|+++.+|++| ++.+ .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~d~~~-------~~~~~~~~~--g~~~~~~~~~~~~~aDvvi-~~vp~~ 70 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQ-------SAVDGLVAA--GASAARSARDAVQGADVVI-SMLPAS 70 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSH-------HHHHHHHHT--TCEECSSHHHHHTTCSEEE-ECCSCH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC---eEEEEcCCH-------HHHHHHHHC--CCeEcCCHHHHHhCCCeEE-EECCCH
Confidence 589999999999999999999996 488888731 111111111 0112368999999999876 4432 2
Q ss_pred CCCHHHHH-------hhccCcEEEeccCCCCcc
Q psy14495 274 VLKKEMVL-------QMAKNPIILALANPLPEI 299 (766)
Q Consensus 274 ~ft~evv~-------~M~~~PiIfaLsNPt~E~ 299 (766)
.-.++++. .+.+..+|..+|+-.++.
T Consensus 71 ~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~ 103 (302)
T 2h78_A 71 QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTS 103 (302)
T ss_dssp HHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHH
T ss_pred HHHHHHHcCchhHHhcCCCCcEEEECCCCCHHH
Confidence 23455555 344667888888765543
No 193
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.44 E-value=0.66 Score=49.37 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=61.2
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc-cccC-CCCHHHHhccCcEEEec
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-KDTT-ARTLSDIIPNADIFLGL 269 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-~~~~-~~~L~e~i~~~~vliG~ 269 (766)
....||.|+|||..|..++-.|...|+- ..++|+|.+-=..++...++.+. .++. ++.. ..+..++++++|++|=+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~-~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV-DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCHDADLVVIC 81 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC-SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGTTCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhCCCCEEEEC
Confidence 3457999999999999999999887763 47999997510000000012222 2333 1111 01458889999987633
Q ss_pred CC----CCC-------CC----HHHHHhh---ccCcEEEeccCCCCc
Q psy14495 270 SV----SGV-------LK----KEMVLQM---AKNPIILALANPLPE 298 (766)
Q Consensus 270 S~----~g~-------ft----~evv~~M---~~~PiIfaLsNPt~E 298 (766)
.+ +|- .+ +++.+.| +++-+|+-.|||.--
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~ 128 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDI 128 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHH
Confidence 22 231 11 2233333 367788889999643
No 194
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=85.36 E-value=0.82 Score=51.59 Aligned_cols=65 Identities=20% Similarity=0.405 Sum_probs=37.2
Q ss_pred ceEEEECcchhhHH--HHHHHHH-cCCC--CccEEEEcCCccccCCCCCCCcHHHHHhcc----c--cC-----CCCHHH
Q psy14495 195 CKLVVSGAGAAALA--CLDLIID-LGFP--LQNIFVTDLAGVLYKGRSELMDSNKARFIK----D--TT-----ARTLSD 258 (766)
Q Consensus 195 ~~iv~~GaG~ag~g--ia~~l~~-~g~~--~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----~--~~-----~~~L~e 258 (766)
.||+|+||||.|.+ +...|.. .-++ -..|||+|-+ .+| +. .....++ . .+ ..++.|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~----~~r---l~-~~~~~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVH----ERR---LN-ASYILARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSC----HHH---HH-HHHHHHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCC----HHH---HH-HHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 38999999998743 2222332 2222 2379999974 222 11 1111111 1 11 258999
Q ss_pred HhccCcEEE
Q psy14495 259 IIPNADIFL 267 (766)
Q Consensus 259 ~i~~~~vli 267 (766)
|++++|++|
T Consensus 73 Al~gAD~Vi 81 (477)
T 3u95_A 73 AIEGADFII 81 (477)
T ss_dssp HHTTCSEEE
T ss_pred HhCCCCEEE
Confidence 999999876
No 195
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.30 E-value=0.38 Score=51.38 Aligned_cols=105 Identities=19% Similarity=0.289 Sum_probs=60.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc-cccCC--CCHHHHhccCcEEE---e
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-KDTTA--RTLSDIIPNADIFL---G 268 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-~~~~~--~~L~e~i~~~~vli---G 268 (766)
.||.|+|||..|.++|..|...|+- +.++++|.+-=..++-..+|.+. ..+. +.... .+..++++++|++| |
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~-~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA-KEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS-SEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 3899999999999999999988873 47999998421000000012221 1121 11111 24678899999865 2
Q ss_pred cCC-CCC-------CC----HHHHHhhc---cCcEEEeccCCCCccCH
Q psy14495 269 LSV-SGV-------LK----KEMVLQMA---KNPIILALANPLPEILP 301 (766)
Q Consensus 269 ~S~-~g~-------ft----~evv~~M~---~~PiIfaLsNPt~E~~p 301 (766)
... +|. .| +++.+.+. ++.+|+-.|||.--.++
T Consensus 79 ~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~ 126 (314)
T 3nep_X 79 LPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTY 126 (314)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHH
Confidence 222 442 12 22333333 68899999999754443
No 196
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.17 E-value=0.5 Score=54.71 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=35.3
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|++.||+|+|||..|..+|..|...|+. +|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~aGVG--~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAWGVR--KITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCCC
Confidence 57888999999999999999999999998 899999974
No 197
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=85.03 E-value=1.3 Score=45.57 Aligned_cols=89 Identities=18% Similarity=0.217 Sum_probs=58.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG- 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g- 273 (766)
.||.|+|+|..|..+|..|.+.|. +++++| +. +.....+.. .-....++.|+++.+|++| ++.+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~-~~-------~~~~~~~~~--g~~~~~~~~~~~~~~D~vi-~~vp~~ 69 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH---QLHVTT-IG-------PVADELLSL--GAVNVETARQVTEFADIIF-IMVPDT 69 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC---EEEECC-SS-------CCCHHHHTT--TCBCCSSHHHHHHTCSEEE-ECCSSH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC---EEEEEc-CH-------HHHHHHHHc--CCcccCCHHHHHhcCCEEE-EECCCH
Confidence 489999999999999999999885 477777 31 223332221 0112357899999999877 33322
Q ss_pred CCCHHHHH---h----hccCcEEEeccCCCC
Q psy14495 274 VLKKEMVL---Q----MAKNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv~---~----M~~~PiIfaLsNPt~ 297 (766)
.-.++++. . +.+..+|+-+||-.+
T Consensus 70 ~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~ 100 (295)
T 1yb4_A 70 PQVEDVLFGEHGCAKTSLQGKTIVDMSSISP 100 (295)
T ss_dssp HHHHHHHHSTTSSTTSCCTTEEEEECSCCCH
T ss_pred HHHHHHHhCchhHhhcCCCCCEEEECCCCCH
Confidence 22456665 3 335668888888654
No 198
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=84.93 E-value=0.72 Score=51.64 Aligned_cols=105 Identities=15% Similarity=0.288 Sum_probs=63.7
Q ss_pred CceEEEECcchh-hHHHHHHHHH--cCCCCccEEEEcCCccccCCCCCCCcHHHHHhc----cccC---CCCHHHHhccC
Q psy14495 194 DCKLVVSGAGAA-ALACLDLIID--LGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI----KDTT---ARTLSDIIPNA 263 (766)
Q Consensus 194 d~~iv~~GaG~a-g~gia~~l~~--~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a----~~~~---~~~L~e~i~~~ 263 (766)
..||.|+|||+. |.+++..|.. .++.-..++|+|.+-- .+|.+.+.+....+. .+.. ..++.++++++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCC
Confidence 369999999998 6677777776 6775558999998430 011111111222221 1111 25789999999
Q ss_pred cEEEecCC-CC---------------C-------------------CCHHHHHhhc---cCcEEEeccCCCCccC
Q psy14495 264 DIFLGLSV-SG---------------V-------------------LKKEMVLQMA---KNPIILALANPLPEIL 300 (766)
Q Consensus 264 ~vliG~S~-~g---------------~-------------------ft~evv~~M~---~~PiIfaLsNPt~E~~ 300 (766)
|++|=... ++ . .-.++++.|. ++-+|+-.|||..-+|
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT 159 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVT 159 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHH
Confidence 98763332 21 0 1134555555 6899999999985443
No 199
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.88 E-value=2.7 Score=45.09 Aligned_cols=109 Identities=10% Similarity=0.122 Sum_probs=63.1
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHh-ccc-cCCC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARF-IKD-TTAR 254 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~-a~~-~~~~ 254 (766)
.....+.+++..+.....++|+|.|+|..|..++.++...|. +++.+|+. . +.+...++.+ |.. -+..
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga---~Vi~~~~~----~---~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS---KVTVISTS----P---SKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESC----G---GGHHHHHHTSCCSEEEETT
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCC----H---HHHHHHHHhcCCceEEecc
Confidence 334445677766655477899999999999999999999996 38877752 1 1122222122 110 0111
Q ss_pred ---CHHHHhccCcEEEecCCCCCCCHHHHHhhccCcEEEeccCC
Q psy14495 255 ---TLSDIIPNADIFLGLSVSGVLKKEMVLQMAKNPIILALANP 295 (766)
Q Consensus 255 ---~L~e~i~~~~vliG~S~~g~ft~evv~~M~~~PiIfaLsNP 295 (766)
.+.+...++|++|=+++.....++.++.|++.-.|.-++.+
T Consensus 241 ~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 241 DQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp CHHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred CHHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence 23333345688887666433446667776654444444443
No 200
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=84.87 E-value=18 Score=38.33 Aligned_cols=135 Identities=9% Similarity=0.174 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEE
Q psy14495 123 PDKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVS 200 (766)
Q Consensus 123 ~~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~ 200 (766)
-|.+-++++-+..-+-.|-+-.++. .+.+.+.+|-. ++||.| |..+-.-.=+||=++.-.+..| +++..||+++
T Consensus 85 gEsl~DTarvls~~~D~iviR~~~~-~~~~~la~~~~--~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~v 160 (310)
T 3csu_A 85 GETLADTISVISTYVDAIVMRHPQE-GAARLATEFSG--NVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMV 160 (310)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEESST-THHHHHHHHCT--TCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEE
T ss_pred CCcHHHHHHHHHHhCCEEEEECCCh-hHHHHHHHhcC--CCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEE
Confidence 4666677665554444565555543 44555556651 489999 4233444456777776655554 7999999999
Q ss_pred Ccch-hh--HHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 201 GAGA-AA--LACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 201 GaG~-ag--~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
|-|. .. -..+..+... |+. +.++-.+|+-- ++.-..+|+.. ...++.|+++++||+.-..+
T Consensus 161 GD~~~~rva~Sl~~~~~~~~g~~---v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 161 GDLKYGRTVHSLTQALAKFDGNR---FYFIAPDALAM-------PQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp SCTTTCHHHHHHHHHHHTSSSCE---EEEECCGGGCC-------CHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CCCCCCchHHHHHHHHHhCCCCE---EEEECCccccc-------CHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 9974 22 2333334456 765 99999988732 22222333322 23689999999999987654
No 201
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=84.83 E-value=6.8 Score=41.58 Aligned_cols=130 Identities=13% Similarity=0.146 Sum_probs=78.0
Q ss_pred HHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcc
Q psy14495 126 LCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAG 203 (766)
Q Consensus 126 ~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG 203 (766)
+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||.| |..+-.-.=+||=++.-.+.. ++++..||+++|-|
T Consensus 90 l~DTarvls~~~D~iviR~~~-~~~~~~la~~~---~vPVINag~g~~~HPtQ~LaDl~Ti~e~~-g~l~gl~va~vGD~ 164 (308)
T 1ml4_A 90 LRDTIKTVEQYCDVIVIRHPK-EGAARLAAEVA---EVPVINAGDGSNQHPTQTLLDLYTIKKEF-GRIDGLKIGLLGDL 164 (308)
T ss_dssp HHHHHHHHTTTCSEEEEEESS-TTHHHHHHHTC---SSCEEEEEETTSCCHHHHHHHHHHHHHHS-SCSSSEEEEEESCT
T ss_pred HHHHHHHHHHhCcEEEEecCC-hhHHHHHHHhC---CCCEEeCccCCccCcHHHHHHHHHHHHHh-CCCCCeEEEEeCCC
Confidence 334444333333345555554 34445555554 599999 533344445677777655554 47999999999997
Q ss_pred hhhHHHHHHH----HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 204 AAALACLDLI----IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 204 ~ag~gia~~l----~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
.=+ -+++.+ ...|+. +.++-.+|+-- ++.-..+++.. ...++.|+++++||+.-..+
T Consensus 165 ~~~-rva~Sl~~~~~~~G~~---v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (308)
T 1ml4_A 165 KYG-RTVHSLAEALTFYDVE---LYLISPELLRM-------PRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRI 230 (308)
T ss_dssp TTC-HHHHHHHHHGGGSCEE---EEEECCGGGCC-------CHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCC
T ss_pred CcC-chHHHHHHHHHHCCCE---EEEECCccccC-------CHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 421 233333 345754 99999988732 22222333322 23689999999999987654
No 202
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=84.82 E-value=1.9 Score=45.58 Aligned_cols=98 Identities=20% Similarity=0.335 Sum_probs=60.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEecCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLGLSV- 271 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~S~- 271 (766)
.||.|+|||..|.++|..+...|+- ..++|+|.+-= ..+. -++-.+ +... .-..++ ++++++|++|=..+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~-~ev~L~Di~~~-~~g~--a~dl~~--~~~~~i~~t~d~-~~l~~aD~Vi~aag~ 87 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIA-DRLVLLDLSEG-TKGA--TMDLEI--FNLPNVEISKDL-SASAHSKVVIFTVNS 87 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECCC------C--HHHHHH--HTCTTEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCC-CEEEEEcCCcc-hHHH--HHHHhh--hcCCCeEEeCCH-HHHCCCCEEEEcCCC
Confidence 6899999999999999999988862 47999998531 1111 111111 2211 112466 88999998774332
Q ss_pred --CCC-----------CCHHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 272 --SGV-----------LKKEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 272 --~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
+|- .-+++.+.|. ++-+|+-.|||...+
T Consensus 88 ~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~ 131 (303)
T 2i6t_A 88 LGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIM 131 (303)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHH
Confidence 221 1234555554 578888899987633
No 203
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.76 E-value=0.47 Score=54.85 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=35.7
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|++.||+|+|||..|..+|..|...|+. +|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG--~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVR--KITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCC--EEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCC--EEEEECCC
Confidence 578899999999999999999999999997 89999986
No 204
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.44 E-value=1.5 Score=46.40 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=62.3
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEec
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~ 269 (766)
....||.|+|+|..|.++|..|.+.|.. ++++|+.- +.-..++.. ....++.|+++.+|++| +
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~~-----------~~~~~l~~~g~~~~~~~~e~~~~aDvVi-~ 93 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYA---LQVWNRTP-----------ARAASLAALGATIHEQARAAARDADIVV-S 93 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCE---EEEECSCH-----------HHHHHHHTTTCEEESSHHHHHTTCSEEE-E
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCe---EEEEcCCH-----------HHHHHHHHCCCEeeCCHHHHHhcCCEEE-E
Confidence 3557999999999999999999999964 88888631 111122221 12368999999999877 4
Q ss_pred CCC-CCCCHHH------HHhhccCcEEEeccCCCCcc
Q psy14495 270 SVS-GVLKKEM------VLQMAKNPIILALANPLPEI 299 (766)
Q Consensus 270 S~~-g~ft~ev------v~~M~~~PiIfaLsNPt~E~ 299 (766)
+.+ ..-.+++ +..+.+.-+|+-+|+-.|+.
T Consensus 94 ~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~ 130 (320)
T 4dll_A 94 MLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPRE 130 (320)
T ss_dssp CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHH
T ss_pred ECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHH
Confidence 433 2222333 34566788999999865543
No 205
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.31 E-value=0.71 Score=47.29 Aligned_cols=92 Identities=20% Similarity=0.202 Sum_probs=56.3
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHH---HHhccccCCCCHHHHhccCcEEEecCCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNK---ARFIKDTTARTLSDIIPNADIFLGLSVS 272 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k---~~~a~~~~~~~L~e~i~~~~vliG~S~~ 272 (766)
||.|+|+|..|..+|..|.+.|. +++++|+.- ++.+.+.... ..+-..... +..++++.+|++| ++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~----~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~d~vi-~~v~ 72 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH---EVQGWLRVP----QPYCSVNLVETDGSIFNESLTA-NDPDFLATSDLLL-VTLK 72 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC----CSEEEEEEECTTSCEEEEEEEE-SCHHHHHTCSEEE-ECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC---CEEEEEcCc----cceeeEEEEcCCCceeeeeeee-cCccccCCCCEEE-EEec
Confidence 79999999999999999999885 588888742 1101111000 000000011 2357788899877 4442
Q ss_pred CCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 273 GVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 273 g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
....+++++.+. +..+|..++|..
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 73 AWQVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp GGGHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred HHhHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 223578887765 456777788864
No 206
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.23 E-value=1.9 Score=46.04 Aligned_cols=98 Identities=20% Similarity=0.249 Sum_probs=59.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH------HhccccCC-CCHHHHhccCcEE
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA------RFIKDTTA-RTLSDIIPNADIF 266 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~------~~a~~~~~-~~L~e~i~~~~vl 266 (766)
..||.|+|||+.|..++-+|...++- ..++|+|.+- ++ +..... +|..+... .+-.++++++|++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~-~el~L~Di~~----~~---~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvV 80 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA-QEIGIVDIFK----DK---TKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSCH----HH---HHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC-CEEEEEeCCc----hH---hHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEE
Confidence 36999999999999999999887763 4799999841 11 111111 22221110 1357889999987
Q ss_pred EecCC----CCC-------CC----HHHHHhh---ccCcEEEeccCCCCcc
Q psy14495 267 LGLSV----SGV-------LK----KEMVLQM---AKNPIILALANPLPEI 299 (766)
Q Consensus 267 iG~S~----~g~-------ft----~evv~~M---~~~PiIfaLsNPt~E~ 299 (766)
|=+.+ +|- .| +++.+.| +++.+|+-.|||.--.
T Consensus 81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~ 131 (326)
T 2zqz_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDIL 131 (326)
T ss_dssp EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence 63332 331 11 2233333 3688888899997533
No 207
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.17 E-value=0.78 Score=47.77 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCC
Confidence 46899999999999999999999975 99999864
No 208
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.11 E-value=0.87 Score=48.05 Aligned_cols=36 Identities=22% Similarity=0.438 Sum_probs=31.6
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..+|+|+|||.||+.+|..|.+.|.. ++.++|+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~--~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGIT--DVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCC--cEEEEecCC
Confidence 356899999999999999999999973 699999874
No 209
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.89 E-value=0.58 Score=50.65 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=35.5
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|++.||+|+|+|..|..++..|...|+. +|.++|.+=
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg--~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIG--EIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCC--eEEEECCCc
Confidence 457888999999999999999999999998 899999863
No 210
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.82 E-value=1.6 Score=45.08 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=58.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
-.||.|+|+|..|..+|..|.+.|.. .+++++|++. +.+...+..-.......++.|+++.+|++| ++.+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~-~~V~~~d~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~aDvVi-lavp~ 76 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPH-YKIVGYNRSD-------RSRDIALERGIVDEATADFKVFAALADVII-LAVPI 76 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSSH-------HHHHHHHHTTSCSEEESCTTTTGGGCSEEE-ECSCH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCC-cEEEEEcCCH-------HHHHHHHHcCCcccccCCHHHhhcCCCEEE-EcCCH
Confidence 35899999999999999999988642 2588888731 111221111010011246778888999877 44432
Q ss_pred CCCHHHHHhh-----ccCcEEEeccCCC
Q psy14495 274 VLKKEMVLQM-----AKNPIILALANPL 296 (766)
Q Consensus 274 ~ft~evv~~M-----~~~PiIfaLsNPt 296 (766)
...+++++.+ .+..+|.-+||-.
T Consensus 77 ~~~~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 77 KKTIDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp HHHHHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCc
Confidence 2236676654 3456777777744
No 211
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.77 E-value=0.63 Score=46.12 Aligned_cols=31 Identities=10% Similarity=0.254 Sum_probs=28.1
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
||+|+|+|..|..+|+.|.+.|.+ ++++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~---v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG---VVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 799999999999999999999875 9999973
No 212
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=83.71 E-value=0.87 Score=48.06 Aligned_cols=31 Identities=13% Similarity=0.306 Sum_probs=28.2
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
-|+|+|||.||+.+|..|.+.|++ +.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~---V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK---TLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 489999999999999999999987 8888874
No 213
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=83.68 E-value=1.6 Score=46.07 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=60.2
Q ss_pred ceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcC--CccccCCCCCCCcHHHHHhccccC--CCCHHHHhccCcEEEec
Q psy14495 195 CKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDL--AGVLYKGRSELMDSNKARFIKDTT--ARTLSDIIPNADIFLGL 269 (766)
Q Consensus 195 ~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~--~Glv~~~r~~~l~~~k~~~a~~~~--~~~L~e~i~~~~vliG~ 269 (766)
.||+|.| +|..|..++..|...|.. ..++|+|. +-=-.++-..++.+... +..+.. ..+ .++++++|++|=+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~~aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTAGSDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhCCCCEEEEc
Confidence 3899999 999999999999887753 35999997 31000000001222111 111111 123 7789999987644
Q ss_pred CC----CCC-----------CCHHHHHhhc---cCcEEEeccCCCCc
Q psy14495 270 SV----SGV-----------LKKEMVLQMA---KNPIILALANPLPE 298 (766)
Q Consensus 270 S~----~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E 298 (766)
.+ +|. .++++++.+. .+.+|+--|||.--
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~ 124 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDL 124 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHH
Confidence 32 332 3455556554 57888889999743
No 214
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.61 E-value=1.7 Score=44.95 Aligned_cols=90 Identities=11% Similarity=0.057 Sum_probs=59.0
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG- 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g- 273 (766)
.||.|+|+|..|.++|..|.+.|.. ++++|++- +.....+..=+ ....++.|+++++|++| ++.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~---V~~~dr~~-------~~~~~~~~~g~--~~~~~~~~~~~~advvi-~~v~~~ 68 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFD---VTVWNRNP-------AKCAPLVALGA--RQASSPAEVCAACDITI-AMLADP 68 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCC---EEEECSSG-------GGGHHHHHHTC--EECSCHHHHHHHCSEEE-ECCSSH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCe---EEEEcCCH-------HHHHHHHHCCC--eecCCHHHHHHcCCEEE-EEcCCH
Confidence 3799999999999999999999954 88888731 12333222111 12358999999999877 44432
Q ss_pred CCCHHHH---Hh----hccCcEEEeccCCCC
Q psy14495 274 VLKKEMV---LQ----MAKNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv---~~----M~~~PiIfaLsNPt~ 297 (766)
.-.++++ +. +.+..+|.-+|+-.|
T Consensus 69 ~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~ 99 (287)
T 3pdu_A 69 AAAREVCFGANGVLEGIGGGRGYIDMSTVDD 99 (287)
T ss_dssp HHHHHHHHSTTCGGGTCCTTCEEEECSCCCH
T ss_pred HHHHHHHcCchhhhhcccCCCEEEECCCCCH
Confidence 2344555 33 335667888887544
No 215
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=83.44 E-value=0.98 Score=45.82 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=29.0
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCC
Confidence 5899999999999999999999964 9999974
No 216
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=83.36 E-value=1.1 Score=45.97 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK---TLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc---EEEEecc
Confidence 46999999999999999999999865 9999997
No 217
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.21 E-value=1.4 Score=46.83 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=59.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH------HhccccCC-CCHHHHhccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA------RFIKDTTA-RTLSDIIPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~------~~a~~~~~-~~L~e~i~~~~vli 267 (766)
.||.|+|||+.|..++-+|...|+- ..++|+|.+- ++ +..... +|.++... .+-.++++++|++|
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~-~el~L~Di~~----~k---~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vi 72 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA-REVVLVDLDR----KL---AQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVV 72 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSH----HH---HHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCCh----hH---HHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEE
Confidence 3899999999999999999887763 4899999852 11 111111 22221110 12377899999876
Q ss_pred ---ecCC-CCC-------CCH----HHHHhhc---cCcEEEeccCCCCccC
Q psy14495 268 ---GLSV-SGV-------LKK----EMVLQMA---KNPIILALANPLPEIL 300 (766)
Q Consensus 268 ---G~S~-~g~-------ft~----evv~~M~---~~PiIfaLsNPt~E~~ 300 (766)
|... +|. .|- ++++.|. ++.+|+-.|||.--.+
T Consensus 73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t 123 (310)
T 2xxj_A 73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMT 123 (310)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHH
T ss_pred ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHH
Confidence 3333 442 122 2333332 6788888999975433
No 218
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=82.91 E-value=4.6 Score=42.86 Aligned_cols=108 Identities=14% Similarity=0.134 Sum_probs=67.9
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcc----ccCCC
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK----DTTAR 254 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~----~~~~~ 254 (766)
+.+++..+.. ....++.|+|+|..|-.+++.|.+. ++. +++++|+. .+ ........|.. -. ..
T Consensus 113 s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~~~~~--~V~v~~r~----~~---~a~~la~~~~~~~~~~~-~~ 180 (322)
T 1omo_A 113 GGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRVFDIG--EVKAYDVR----EK---AAKKFVSYCEDRGISAS-VQ 180 (322)
T ss_dssp HHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHHSCCC--EEEEECSS----HH---HHHHHHHHHHHTTCCEE-EC
T ss_pred HHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHhCCcc--EEEEECCC----HH---HHHHHHHHHHhcCceEE-EC
Confidence 3455544432 3567999999999999999988874 444 79988873 11 12333333321 12 56
Q ss_pred CHHHHhccCcEEEecCC--CCCCCHHHHHhhccCcEEEecc--CCCC-ccCHhh
Q psy14495 255 TLSDIIPNADIFLGLSV--SGVLKKEMVLQMAKNPIILALA--NPLP-EILPED 303 (766)
Q Consensus 255 ~L~e~i~~~~vliG~S~--~g~ft~evv~~M~~~PiIfaLs--NPt~-E~~pe~ 303 (766)
++.|++ ++|+++=+.. .-.++.++ +.+.-.|+.++ +|.. |+.++-
T Consensus 181 ~~~e~v-~aDvVi~aTp~~~pv~~~~~---l~~G~~V~~ig~~~p~~~el~~~~ 230 (322)
T 1omo_A 181 PAEEAS-RCDVLVTTTPSRKPVVKAEW---VEEGTHINAIGADGPGKQELDVEI 230 (322)
T ss_dssp CHHHHT-SSSEEEECCCCSSCCBCGGG---CCTTCEEEECSCCSTTCCCBCHHH
T ss_pred CHHHHh-CCCEEEEeeCCCCceecHHH---cCCCeEEEECCCCCCCccccCHHH
Confidence 899999 9999886543 22344332 33567888884 4553 777653
No 219
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=82.65 E-value=2.7 Score=44.83 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=46.1
Q ss_pred CcEEecCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 163 IPVFHDDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 163 ~~~fnDD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
+|- -|+.++.....++..+.+++..+.+ ...+|+|+|||..|...+.+.+..|.. +++.+|+
T Consensus 151 iP~-~s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~ 212 (363)
T 3m6i_A 151 IGN-MSYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAKAAGAC--PLVITDI 212 (363)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHHHTTCC--SEEEEES
T ss_pred CCC-CCHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECC
Confidence 444 4555665555666777778665543 456899999999999999988899986 7888876
No 220
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=82.50 E-value=1.1 Score=46.12 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=29.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|||+|+|.||+.+|..|.+.|.+ +.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQAS---VKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcC
Confidence 35899999999999999999999875 9999986
No 221
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.36 E-value=5.7 Score=43.18 Aligned_cols=50 Identities=16% Similarity=0.254 Sum_probs=36.7
Q ss_pred HHHHHHHHHhHhC-CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVK-KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~-~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++..+.++.... .--...+|+|+|||..|..++.+.+..|.+ +++.+|+
T Consensus 196 ~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~ 246 (404)
T 3ip1_A 196 PTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGAS--KVILSEP 246 (404)
T ss_dssp HHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECS
T ss_pred HHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECC
Confidence 3444455554333 334578999999999999989999999986 6888775
No 222
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=82.35 E-value=0.75 Score=49.64 Aligned_cols=38 Identities=13% Similarity=0.249 Sum_probs=35.0
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++|++.||+|+|+|..|..++..|...|+. +|.++|.+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~Gvg--~itlvD~d 69 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILAGVK--GLTMLDHE 69 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCC--EEEEEECC
Confidence 357888999999999999999999999998 89999986
No 223
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=82.28 E-value=9.1 Score=41.47 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=75.3
Q ss_pred ccccccCCCCchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHH----H
Q psy14495 139 GINLEDIKAPECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDL----I 213 (766)
Q Consensus 139 ~i~~ED~~~~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~----l 213 (766)
.|-+-.++ ..+.+.+.+|- ++||+| .|.+-.-.=+||=++.-.+..| +|+..||+++|-|.. .+++. +
T Consensus 125 ~IviR~~~-~~~~~~lA~~s---~vPVINa~~~~~HPtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~--rva~Sl~~~~ 197 (359)
T 2w37_A 125 GIEFRGFK-QSDAEILARDS---GVPVWNGLTDEWHPTQMLADFMTVKENFG-KLQGLTLTFMGDGRN--NVANSLLVTG 197 (359)
T ss_dssp EEEEESSC-HHHHHHHHHHS---SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTS--HHHHHHHHHH
T ss_pred EEEEecCC-hHHHHHHHHhC---CCCEEcCCCCCCCccHHHHHHHHHHHHhC-CcCCeEEEEECCCcc--chHHHHHHHH
Confidence 45444443 44455555665 599999 2233344556777777666655 799999999999832 34333 3
Q ss_pred HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 214 IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 214 ~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
...|+. |+++-.+|+.-. +.+-..-+.+|+.. ...++.|+++++||+.-..+
T Consensus 198 ~~lG~~---v~~~~P~~l~p~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w 254 (359)
T 2w37_A 198 AILGVN---IHIVAPKALFPT---EETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHTCE---EEEECCGGGSCC---HHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCS
T ss_pred HHcCCE---EEEECCccccCC---HHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEccc
Confidence 456875 999999887431 11212223344322 24689999999999987655
No 224
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=82.15 E-value=2.4 Score=45.09 Aligned_cols=49 Identities=22% Similarity=0.250 Sum_probs=37.0
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++..+.+++..+.+ ..++|+|+|||..|...+.+.+..|.. +++.+|+
T Consensus 151 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIK-LGDTVCVIGIGPVGLMSVAGANHLGAG--RIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCC-TTCCEEEECCSHHHHHHHHHHHTTTCS--SEEEECC
T ss_pred hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCc--EEEEECC
Confidence 445556667654433 467899999999998888888888975 6988877
No 225
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=82.01 E-value=1.1 Score=46.54 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 46899999999999999999998865 99999863
No 226
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=82.00 E-value=1.1 Score=48.21 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=29.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.||||+|+|.||+.+|..|.+.|-. -+|.|+|++-
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~-~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPS-IEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcC-CeEEEEeCCC
Confidence 5899999999999999999887643 2699998753
No 227
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=81.99 E-value=1.1 Score=48.10 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=30.6
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+++..+|+|+|||.||+.+|..|.+.|++ +.++|+.-
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~ 44 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSS 44 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCC
Confidence 34567999999999999999999999975 99999854
No 228
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=81.65 E-value=0.99 Score=46.73 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecC
Confidence 46899999999999999999999976 8899983
No 229
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=81.61 E-value=2.9 Score=47.31 Aligned_cols=93 Identities=19% Similarity=0.187 Sum_probs=62.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH-Hhc-c-ccCCCCHHHHhcc---CcEEEe
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA-RFI-K-DTTARTLSDIIPN---ADIFLG 268 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~-~~a-~-~~~~~~L~e~i~~---~~vliG 268 (766)
.+|.|+|+|..|.++|..|.+.|.+ ++++|+.- +.....+. ... . -....++.|+++. +|++|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~---V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVi- 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFT---VCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVM- 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEE-
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCE---EEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEE-
Confidence 3899999999999999999999975 88888731 11222221 100 0 1123579999887 88776
Q ss_pred cCC-CCCCCHHHHHhhc----cCcEEEeccCCCCc
Q psy14495 269 LSV-SGVLKKEMVLQMA----KNPIILALANPLPE 298 (766)
Q Consensus 269 ~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~E 298 (766)
++. .+...+++++.+. +..||.-+||-.++
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~ 114 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFP 114 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChh
Confidence 444 3445667776665 45689999997653
No 230
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.61 E-value=1.7 Score=46.22 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=29.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
-.||.|+|+|.-|.++|..|.+.|.. ++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~---V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 36899999999999999999999975 9999974
No 231
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=81.51 E-value=2 Score=45.93 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=61.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccC---CCCHHHHhccCcEEE
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTT---ARTLSDIIPNADIFL 267 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~---~~~L~e~i~~~~vli 267 (766)
++..||.|+|||..|.++|..|...|+. ++.|+|.+-=..++-..+|.+.. .|.. ... ..+. ++++++|++|
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELG--DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCEEEESSG-GGGTTCSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEEEEeCCH-HHHCCCCEEE
Confidence 5567999999999999999999999984 69999984210000000122211 1221 111 1344 8999999765
Q ss_pred ecC---C-CCC-----C--C----HHHHHhhc---cCcEEEeccCCCCccCH
Q psy14495 268 GLS---V-SGV-----L--K----KEMVLQMA---KNPIILALANPLPEILP 301 (766)
Q Consensus 268 G~S---~-~g~-----f--t----~evv~~M~---~~PiIfaLsNPt~E~~p 301 (766)
=+. . +|. | + +++++.+. ++-+|+-.|||.--.++
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~ 132 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVW 132 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHH
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHH
Confidence 332 2 342 1 2 23333333 57799999999754443
No 232
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=81.45 E-value=0.7 Score=46.93 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=57.2
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVL 275 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~f 275 (766)
||.|+|+|..|..++..|.+.|. .+++++|++- +.+...+..|-- .-..++.|++ .+|++| ++.+...
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~r~~-------~~~~~~~~~~g~-~~~~~~~~~~-~~D~vi-~~v~~~~ 69 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGG--YRIYIANRGA-------EKRERLEKELGV-ETSATLPELH-SDDVLI-LAVKPQD 69 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCS--CEEEEECSSH-------HHHHHHHHHTCC-EEESSCCCCC-TTSEEE-ECSCHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCC--CeEEEECCCH-------HHHHHHHHhcCC-EEeCCHHHHh-cCCEEE-EEeCchh
Confidence 79999999999999999999884 3688888731 112222222210 1123566777 889876 4443334
Q ss_pred CHHHHHhhcc-CcEEEeccCCCC
Q psy14495 276 KKEMVLQMAK-NPIILALANPLP 297 (766)
Q Consensus 276 t~evv~~M~~-~PiIfaLsNPt~ 297 (766)
.+++++.+.+ ..+|.-++|-.+
T Consensus 70 ~~~v~~~l~~~~~ivv~~~~g~~ 92 (263)
T 1yqg_A 70 MEAACKNIRTNGALVLSVAAGLS 92 (263)
T ss_dssp HHHHHTTCCCTTCEEEECCTTCC
T ss_pred HHHHHHHhccCCCEEEEecCCCC
Confidence 4677766653 567777877554
No 233
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=81.37 E-value=1.7 Score=45.65 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=62.3
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEec
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~ 269 (766)
.+.+-.||.|+|+|..|.++|..|.+.|. +++++|++- +.....+..=+ .-..++.|+++.+|++| +
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~---~V~~~dr~~-------~~~~~l~~~g~--~~~~~~~~~~~~aDvvi-~ 83 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGF---KVTVWNRTL-------SKCDELVEHGA--SVCESPAEVIKKCKYTI-A 83 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSG-------GGGHHHHHTTC--EECSSHHHHHHHCSEEE-E
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH-------HHHHHHHHCCC--eEcCCHHHHHHhCCEEE-E
Confidence 34445799999999999999999999996 488888731 12233221111 12468999999999877 3
Q ss_pred CCC-CCCCHHHH---H----hhccCcEEEeccCCCCc
Q psy14495 270 SVS-GVLKKEMV---L----QMAKNPIILALANPLPE 298 (766)
Q Consensus 270 S~~-g~ft~evv---~----~M~~~PiIfaLsNPt~E 298 (766)
+.+ ..-.++++ + .+.+..+|.-+|+-.|+
T Consensus 84 ~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~ 120 (310)
T 3doj_A 84 MLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAE 120 (310)
T ss_dssp CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred EcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHH
Confidence 332 22334555 3 34466788888875553
No 234
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.36 E-value=2.6 Score=44.05 Aligned_cols=73 Identities=23% Similarity=0.307 Sum_probs=53.6
Q ss_pred ceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCC
Q psy14495 195 CKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSG 273 (766)
Q Consensus 195 ~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g 273 (766)
.||.|+| +|..|..+|..|.+.|. +++++|++- + .++.++++.+|++| ++.+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~---~V~~~~~~~-------~---------------~~~~~~~~~aDvVi-lavp~ 75 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY---PISILDRED-------W---------------AVAESILANADVVI-VSVPI 75 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTC-------G---------------GGHHHHHTTCSEEE-ECSCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC---eEEEEECCc-------c---------------cCHHHHhcCCCEEE-EeCCH
Confidence 4899999 99999999999999986 488888631 1 14778888999877 55544
Q ss_pred CCCHHHHHhhc----cCcEEEecc
Q psy14495 274 VLKKEMVLQMA----KNPIILALA 293 (766)
Q Consensus 274 ~ft~evv~~M~----~~PiIfaLs 293 (766)
..++++++.+. +..+|.-++
T Consensus 76 ~~~~~vl~~l~~~l~~~~iv~~~~ 99 (298)
T 2pv7_A 76 NLTLETIERLKPYLTENMLLADLT 99 (298)
T ss_dssp GGHHHHHHHHGGGCCTTSEEEECC
T ss_pred HHHHHHHHHHHhhcCCCcEEEECC
Confidence 45788887765 344555554
No 235
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=81.31 E-value=0.81 Score=49.11 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=58.1
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-----c-------cCCCCHHHHhccC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-----D-------TTARTLSDIIPNA 263 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-----~-------~~~~~L~e~i~~~ 263 (766)
||.|+|+|..|..+|..|.+.|. +++++|+.. +.+...+..... . .-..++.|+++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~---~V~~~~r~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 86 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR---EVCVWHMNE-------EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGA 86 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE---EEEEECSCH-------HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC---EEEEEECCH-------HHHHHHHHcCcccccccccccccceeeeCCHHHHHcCC
Confidence 89999999999999999988874 488888742 112222211100 0 0114688999999
Q ss_pred cEEEecCCCCCCCHHHHHh----hc----c-CcEEEeccCCC
Q psy14495 264 DIFLGLSVSGVLKKEMVLQ----MA----K-NPIILALANPL 296 (766)
Q Consensus 264 ~vliG~S~~g~ft~evv~~----M~----~-~PiIfaLsNPt 296 (766)
|++| ++.+....+++++. +. + ..+|..++|-.
T Consensus 87 DvVi-lav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 87 EIIL-FVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp SSEE-ECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred CEEE-ECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 8655 44433345666666 44 4 67888899864
No 236
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=81.25 E-value=1.3 Score=47.18 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=59.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCC--CCHHHHhccCcEEEecC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTA--RTLSDIIPNADIFLGLS 270 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~--~~L~e~i~~~~vliG~S 270 (766)
+..||.|+|||..|.++|..|...|+. .++++|.+-=..++-..+|.+...++-+.... .+-.++++++|++|=+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~--~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLG--DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTA 81 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcC
Confidence 456999999999999999999998885 79999985210000000111110111111111 12358899999765332
Q ss_pred C----CCC-----C--C----HHHHHhhc---cCcEEEeccCCCC
Q psy14495 271 V----SGV-----L--K----KEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 271 ~----~g~-----f--t----~evv~~M~---~~PiIfaLsNPt~ 297 (766)
+ +|. | + +++++.+. ++-+|+-.|||.-
T Consensus 82 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd 126 (321)
T 3p7m_A 82 GVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLD 126 (321)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred CcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchH
Confidence 2 442 1 2 23333333 5678888899964
No 237
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=81.14 E-value=0.93 Score=48.31 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=59.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH------HhccccCC-CCHHHHhccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA------RFIKDTTA-RTLSDIIPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~------~~a~~~~~-~~L~e~i~~~~vli 267 (766)
.||.|+|||+.|..++-+|...|+- ..++|+|.+- ++ +..... +|..+... .+-.++++++|++|
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~-~el~L~Di~~----~~---~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi 77 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA-EEFVIVDVVK----DR---TKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVV 77 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSSH----HH---HHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC-CEEEEEeCCc----hH---HHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEE
Confidence 6999999999999999999887763 4799999831 11 111111 22221110 14578899999876
Q ss_pred ecCC----CCC-------CCHHHH----Hhh---ccCcEEEeccCCCCccC
Q psy14495 268 GLSV----SGV-------LKKEMV----LQM---AKNPIILALANPLPEIL 300 (766)
Q Consensus 268 G~S~----~g~-------ft~evv----~~M---~~~PiIfaLsNPt~E~~ 300 (766)
=+.+ +|- .|-+++ +.| +++.+|+-.|||.--.|
T Consensus 78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t 128 (318)
T 1ez4_A 78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILT 128 (318)
T ss_dssp ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHH
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHH
Confidence 3322 331 111333 333 36888888999975433
No 238
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=80.89 E-value=1.5 Score=41.42 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=28.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+++|+|+|.+|+.+|..|.+.|.+ +.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLK---VLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 4799999999999999999999865 8999875
No 239
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=80.87 E-value=2.7 Score=43.44 Aligned_cols=90 Identities=18% Similarity=0.247 Sum_probs=57.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC-C
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS-G 273 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~-g 273 (766)
.||.|+|+|..|..++..|.+.|. +++++|++. +.....+.. .-....++.|+++++|++| ++.+ .
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~-------~~~~~~~~~--g~~~~~~~~~~~~~~D~vi-~~v~~~ 72 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY---SLVVSDRNP-------EAIADVIAA--GAETASTAKAIAEQCDVII-TMLPNS 72 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSCH-------HHHHHHHHT--TCEECSSHHHHHHHCSEEE-ECCSSH
T ss_pred ceEEEECchHHHHHHHHHHHhCCC---EEEEEeCCH-------HHHHHHHHC--CCeecCCHHHHHhCCCEEE-EECCCH
Confidence 489999999999999999999885 488888631 111111111 0012357889999999877 3332 2
Q ss_pred CCCHHHH-------HhhccCcEEEeccCCCC
Q psy14495 274 VLKKEMV-------LQMAKNPIILALANPLP 297 (766)
Q Consensus 274 ~ft~evv-------~~M~~~PiIfaLsNPt~ 297 (766)
.-.++++ ..+.+..+|.-+||-.+
T Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~ 103 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAKPGTVLIDMSSIAP 103 (299)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred HHHHHHHhCcchHhhcCCCCCEEEECCCCCH
Confidence 2234444 34556778888888654
No 240
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.78 E-value=1.3 Score=47.15 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=63.9
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc--cccCCCCCCCcHHHHHhcc-ccCC--CCHHHHhccCcEE
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG--VLYKGRSELMDSNKARFIK-DTTA--RTLSDIIPNADIF 266 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G--lv~~~r~~~l~~~k~~~a~-~~~~--~~L~e~i~~~~vl 266 (766)
.+..||.|+|||..|.++|..|...|+ .+++++|.+- -..++...++.+. .++.. .... .+-.++++++|++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~~a~~~aDvV 82 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDYADTADSDVV 82 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCHHHhCCCCEE
Confidence 345799999999999999999999998 4799999861 1111110112221 23321 1111 1225789999986
Q ss_pred EecC---C-CCC-----C------CHHHHHhhc---cCcEEEeccCCCCccCH
Q psy14495 267 LGLS---V-SGV-----L------KKEMVLQMA---KNPIILALANPLPEILP 301 (766)
Q Consensus 267 iG~S---~-~g~-----f------t~evv~~M~---~~PiIfaLsNPt~E~~p 301 (766)
|=+. . +|- | -+++.+.+. ++-+|+-.|||.--.++
T Consensus 83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~ 135 (315)
T 3tl2_A 83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTY 135 (315)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHH
Confidence 5332 2 442 1 123444443 57799999999744443
No 241
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=80.77 E-value=1.1 Score=47.60 Aligned_cols=35 Identities=11% Similarity=0.263 Sum_probs=30.9
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++..|+|+|||.||+.+|..|.+.|++ +.++|+.-
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~---V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 346899999999999999999999976 99999864
No 242
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=80.71 E-value=1.6 Score=44.83 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=55.4
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGVL 275 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~f 275 (766)
||.|+|+|..|..++..|.+ |.. ++++|++. +.....+..=++.. . +.|+++.+|++|=+......
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~---V~~~~~~~-------~~~~~~~~~g~~~~--~-~~~~~~~~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFP---TLVWNRTF-------EKALRHQEEFGSEA--V-PLERVAEARVIFTCLPTTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSC---EEEECSST-------HHHHHHHHHHCCEE--C-CGGGGGGCSEEEECCSSHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCe---EEEEeCCH-------HHHHHHHHCCCccc--C-HHHHHhCCCEEEEeCCChHH
Confidence 79999999999999999998 864 88888631 11222211111111 2 67888889987733222222
Q ss_pred CHHHHHhh----ccCcEEEeccCCCC
Q psy14495 276 KKEMVLQM----AKNPIILALANPLP 297 (766)
Q Consensus 276 t~evv~~M----~~~PiIfaLsNPt~ 297 (766)
.+++++.+ .+..+|+-+||..+
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s~~~~ 94 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDATSGEP 94 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECSCCCH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 44555544 35678888898654
No 243
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=81.70 E-value=0.32 Score=48.24 Aligned_cols=91 Identities=11% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~ 271 (766)
+.+.||.|+|+|..|..++..|.+.|. +++++|+.-- + +.+.. ......++.|+++.+|++| ++.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~---~V~~~~r~~~----~-~~~~~------~g~~~~~~~~~~~~aDvVi-lav 81 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY---SVVFGSRNPQ----V-SSLLP------RGAEVLCYSEAASRSDVIV-LAV 81 (201)
Confidence 456789999999999999999998885 3777776421 1 11111 0111126778888888766 444
Q ss_pred CCCCCHHHH--HhhccCcEEEeccCCCC
Q psy14495 272 SGVLKKEMV--LQMAKNPIILALANPLP 297 (766)
Q Consensus 272 ~g~ft~evv--~~M~~~PiIfaLsNPt~ 297 (766)
+...+++++ ..|.+..+|.-++|..+
T Consensus 82 ~~~~~~~v~~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 82 HREHYDFLAELADSLKGRVLIDVSNNQK 109 (201)
Confidence 222344444 22335567888888765
No 244
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=80.66 E-value=1.5 Score=45.80 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..|+|+|+|.+|+.+|..|.+.|.+ +.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~---V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHE---VLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 46899999999999999999999976 9999985
No 245
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=80.54 E-value=1.3 Score=39.89 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=29.0
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++..+|+|+|+|..|..+++.|.+.|.. ++++|++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~---v~~~d~~ 38 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHE---VLAVDIN 38 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCC---CEEEESC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 4556899999999999999999999854 8888874
No 246
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=80.40 E-value=3.1 Score=46.79 Aligned_cols=95 Identities=15% Similarity=0.295 Sum_probs=59.5
Q ss_pred CceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCCccccCCCCCCCcH-HHHHhcc-ccCCCC----HHHHhccCcEE
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLAGVLYKGRSELMDS-NKARFIK-DTTART----LSDIIPNADIF 266 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~-~k~~~a~-~~~~~~----L~e~i~~~~vl 266 (766)
+.||||+|||+.|-+++.+|.+. ++...+|.+.|++-- .+ ++.+ ....+.. .-+..+ |...+++.|++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~---~~--~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT---KV--DVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC---SC--CHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh---hh--hHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 46899999999999999999874 565568999987421 11 2211 1111211 112232 33456556999
Q ss_pred EecCCCCCCCHHHHHhhc-cCcEEEeccC
Q psy14495 267 LGLSVSGVLKKEMVLQMA-KNPIILALAN 294 (766)
Q Consensus 267 iG~S~~g~ft~evv~~M~-~~PiIfaLsN 294 (766)
|=+|. ..++.++++.-. ..--.+-++|
T Consensus 88 IN~s~-~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 88 IDVSI-GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp EECCS-SSCHHHHHHHHHHHTCEEEESSC
T ss_pred EECCc-cccCHHHHHHHHHcCCCEEECCC
Confidence 97664 446667777665 3566677777
No 247
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.38 E-value=2.1 Score=45.36 Aligned_cols=104 Identities=17% Similarity=0.213 Sum_probs=59.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccC-CCCHHHHhccCcEEEecC--
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTT-ARTLSDIIPNADIFLGLS-- 270 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~-~~~L~e~i~~~~vliG~S-- 270 (766)
.||.|+|||..|.++|..|...|+- ..++++|.+--..+....++.+. .++.. +.. ..+..++++++|++|=+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~-~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIA-DEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC-CEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCCCCEEEEcCCC
Confidence 5999999999999999999887763 37999998521000000011111 11111 000 013467899999876332
Q ss_pred -C-CCC-----------CCHHHHHhhc---cCcEEEeccCCCCccC
Q psy14495 271 -V-SGV-----------LKKEMVLQMA---KNPIILALANPLPEIL 300 (766)
Q Consensus 271 -~-~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E~~ 300 (766)
. +|. ..+++.+.|. ++-++|-.|||....+
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~ 130 (316)
T 1ldn_A 85 NQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILT 130 (316)
T ss_dssp CCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHH
T ss_pred CCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHH
Confidence 2 331 2234444443 4557777899975444
No 248
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=80.28 E-value=1.4 Score=48.94 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=34.3
Q ss_pred HhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 187 LVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 187 ~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+.++.-+..+|+|+|||.||+.+|..|.+.|.+ +.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCC
Confidence 344445667999999999999999999999964 888888643
No 249
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=80.15 E-value=4 Score=43.89 Aligned_cols=45 Identities=20% Similarity=0.210 Sum_probs=33.8
Q ss_pred HHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 182 LNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 182 l~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
+.++.....--...+|+|+|||..|...+.+++..|.. +++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~--~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGAS--RIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCS--CEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcC
Confidence 33443333334577999999999999999999999986 7988885
No 250
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=80.04 E-value=1.5 Score=45.55 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=29.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.+|+.+|..|.+.|++ +.++|+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc---EEEEECC
Confidence 4799999999999999999999986 9999985
No 251
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=79.99 E-value=1.5 Score=47.32 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
...+|+|+|||.+|+.+|..|.+.|++ +.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCC
Confidence 456899999999999999999999976 89998853
No 252
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=79.92 E-value=1.5 Score=47.21 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=30.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+.+|..|.+.|++ +.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCC
Confidence 46899999999999999999999986 99999863
No 253
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=79.91 E-value=1.7 Score=45.97 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=30.7
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
...+|+|+|||.||+.+|..|.+.|.+ +.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCC
Confidence 357899999999999999999998875 99999863
No 254
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=79.91 E-value=1.2 Score=47.08 Aligned_cols=95 Identities=20% Similarity=0.328 Sum_probs=57.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-------ccC---CCCHHHHhccCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-------DTT---ARTLSDIIPNAD 264 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-------~~~---~~~L~e~i~~~~ 264 (766)
.||.|+|||..|.+++..|...|.- +++|+|.+- ++ +......+.+ ... ..++ ++++++|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~--~v~L~Di~~----~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD 72 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG--DIVLLDIVE----GV---PQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSD 72 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSSS----SH---HHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCCc----cH---HHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCC
Confidence 4899999999999999999998863 299999741 11 1111111111 111 1456 8899999
Q ss_pred EEEecCC----CCC-----------CCHHHHHhhc---cCcEEEeccCCCCcc
Q psy14495 265 IFLGLSV----SGV-----------LKKEMVLQMA---KNPIILALANPLPEI 299 (766)
Q Consensus 265 vliG~S~----~g~-----------ft~evv~~M~---~~PiIfaLsNPt~E~ 299 (766)
++|=+-+ +|- ..+++.+.+. ++-+|+--|||....
T Consensus 73 ~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~ 125 (309)
T 1ur5_A 73 VIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAM 125 (309)
T ss_dssp EEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHH
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHH
Confidence 8763322 231 1124455544 466777779997544
No 255
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.80 E-value=1.5 Score=45.38 Aligned_cols=33 Identities=33% Similarity=0.503 Sum_probs=29.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|+|.||+.+|..|.+.|.+ +.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFS---VAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCC
Confidence 46899999999999999999999965 9999985
No 256
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=79.77 E-value=1.3 Score=47.69 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+..+|+|+|||.+|+.+|..|.+.|++ +.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 4567999999999999999999999986 99999863
No 257
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=79.75 E-value=1.5 Score=46.47 Aligned_cols=34 Identities=15% Similarity=0.054 Sum_probs=30.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+.+|..|.+.|.+ +.++|+..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKN---TALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCC
Confidence 46899999999999999999999975 99999864
No 258
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=79.72 E-value=1.5 Score=47.53 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=31.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.+|+.+|..|.+.|++ ++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~--~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIG--KVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 46899999999999999999999975 599999864
No 259
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=79.63 E-value=7.4 Score=41.18 Aligned_cols=95 Identities=15% Similarity=0.186 Sum_probs=57.9
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc------cCC-CCHHHHhccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD------TTA-RTLSDIIPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~------~~~-~~L~e~i~~~~vli 267 (766)
.||.|+|||..|..++-+|...|+- ..++++|.+ .++ +......+.+. ... .+-.++++++|++|
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~-~ev~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVi 79 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTA-NELVLIDVF----KEK---AIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIV 79 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCS-SEEEEECCC----------CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-CEEEEEeCC----hHH---HHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEE
Confidence 5899999999999999999988863 379999985 222 22222222221 100 12367899999876
Q ss_pred ecCC----CCC-------C----CHHHHHhhc---cCcEEEeccCCCC
Q psy14495 268 GLSV----SGV-------L----KKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 268 G~S~----~g~-------f----t~evv~~M~---~~PiIfaLsNPt~ 297 (766)
=+.+ +|. . -+++++.|. ++-+|+-.|||.-
T Consensus 80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~ 127 (318)
T 1y6j_A 80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 127 (318)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHH
T ss_pred EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHH
Confidence 3322 332 1 145555555 5777777899964
No 260
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.62 E-value=2.8 Score=47.30 Aligned_cols=93 Identities=17% Similarity=0.223 Sum_probs=61.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC---CCCHHHHhcc---CcEEE
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT---ARTLSDIIPN---ADIFL 267 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~---~~~L~e~i~~---~~vli 267 (766)
..+|.|+|.|..|.++|..|.+.|.+ ++++|+.- +........-+.... ..++.|+++. +|++|
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~---V~v~dr~~-------~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFV---VCAFNRTV-------SKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCE---EEEEeCCH-------HHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEE
Confidence 35899999999999999999999975 88888731 112222222111111 3678898874 88766
Q ss_pred ecCC-CCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 268 GLSV-SGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 268 G~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
++. ++..++++++.+. +..||.-.||-.+
T Consensus 74 -l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 74 -LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp -ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred -EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 444 3434555665544 6789999999765
No 261
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=79.54 E-value=1.6 Score=45.30 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|+|.||+..|..|.+.|.+ +.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCC
Confidence 46899999999999999999999875 9999987
No 262
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=79.53 E-value=1.3 Score=47.77 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=31.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.++.+|+|+|||.+|+.+|..|.+.|++ +.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 4567999999999999999999999975 99999863
No 263
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=79.35 E-value=1.2 Score=49.74 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=34.7
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.|++.||+++|+|..|..++..|...|+. +|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~aGvg--~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALSGFR--QIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHTTCC--CEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHcCCC--EEEEEcCC
Confidence 446788999999999999999999999997 89999986
No 264
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=79.24 E-value=0.81 Score=49.40 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=59.7
Q ss_pred CCCceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEe
Q psy14495 192 MKDCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLG 268 (766)
Q Consensus 192 l~d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG 268 (766)
+...||+|+|| |..|..+|..+...|+.. +++++|.+-=..++-.-+|++. .|... .-..++.++++++|++|=
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~-evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTP-NLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCS-CEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHHHTTEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCC-EEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHHhCCCCEEEE
Confidence 34679999998 999999999999989742 7999997310000000012221 22110 112578899999998762
Q ss_pred cC---C-CCC-------C----CHHHHHhhc---cCc-EEEeccCCCCc
Q psy14495 269 LS---V-SGV-------L----KKEMVLQMA---KNP-IILALANPLPE 298 (766)
Q Consensus 269 ~S---~-~g~-------f----t~evv~~M~---~~P-iIfaLsNPt~E 298 (766)
+. . +|- . -+++.+.+. ++- +|+-.|||.--
T Consensus 83 taG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~ 131 (343)
T 3fi9_A 83 SGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADI 131 (343)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHH
Confidence 32 2 332 1 122333333 455 48888999643
No 265
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=78.95 E-value=1.8 Score=44.53 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=29.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|+|.||+.+|..|.+.|.. ++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~--~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVK--NAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCS--SEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCC--cEEEEcCC
Confidence 4799999999999999999999983 59999985
No 266
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=78.87 E-value=1.6 Score=46.29 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=30.4
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+.+|..|.+.|.+ +.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~---V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE---VTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 46899999999999999999999975 99999863
No 267
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=78.86 E-value=1.9 Score=39.27 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=29.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
+..+|+|+|+|.-|..+++.|.+.|.. ++++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~---V~~id~ 37 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKK---VLAVDK 37 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEC
Confidence 346899999999999999999999975 898987
No 268
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=78.81 E-value=1.6 Score=47.28 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=31.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
.+|||+|||.||+.+|..|.+.|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~-~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYP-GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcC-CCEEEEeCCCCC
Confidence 5899999999999999999999874 269999997633
No 269
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=78.74 E-value=1.5 Score=44.86 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=28.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEE-EcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFV-TDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~-~D~~ 229 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCC
Confidence 35899999999999999999999876 667 8873
No 270
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=78.71 E-value=1.4 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=30.4
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+.+|..|.+.|++ +.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~---V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFK---VKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 46899999999999999999999986 99999864
No 271
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=78.70 E-value=4.1 Score=43.62 Aligned_cols=50 Identities=22% Similarity=0.083 Sum_probs=35.3
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++..+.++.....--..++|+|+|+|..|...+.+++..|.. +++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~--~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGAS--IIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCS--EEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECC
Confidence 4444455553222223467999999999999888888888975 6888876
No 272
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.66 E-value=1.8 Score=43.22 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|+|.+|+..|..|.+.|.+ +.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecC
Confidence 46899999999999999999999976 8888875
No 273
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.60 E-value=3.6 Score=42.48 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=58.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc--cCCCCHHHHhccCcEEEecCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD--TTARTLSDIIPNADIFLGLSVS 272 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~--~~~~~L~e~i~~~~vliG~S~~ 272 (766)
.||.|+|+|..|..++..|.+.|. +++++|++. +....+++. ....++.|+++.+|++| ++.|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~D~vi-~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV---TVYAFDLME-----------ANVAAVVAQGAQACENNQKVAAASDIIF-TSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC---EEEEECSSH-----------HHHHHHHTTTCEECSSHHHHHHHCSEEE-ECCS
T ss_pred CEEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH-----------HHHHHHHHCCCeecCCHHHHHhCCCEEE-EECC
Confidence 589999999999999999999885 488888631 111112211 12357889999999877 3332
Q ss_pred -CCCCHHHH-------HhhccCcEEEeccCCCC
Q psy14495 273 -GVLKKEMV-------LQMAKNPIILALANPLP 297 (766)
Q Consensus 273 -g~ft~evv-------~~M~~~PiIfaLsNPt~ 297 (766)
..-.++++ ..+.+..+|.-+||-.+
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~ 102 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSP 102 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCH
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCH
Confidence 22234455 33456778888888654
No 274
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=78.59 E-value=1.8 Score=46.81 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=29.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|+|+|||.+|+.+|..|.+.|.+ +.++++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~---V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKK---VLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCe---EEEEecCC
Confidence 3799999999999999999999975 99999854
No 275
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=78.58 E-value=6.8 Score=41.52 Aligned_cols=54 Identities=17% Similarity=0.120 Sum_probs=38.1
Q ss_pred chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 171 HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 171 qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++.....++..+.+++..+.+ ..++|+|.|||..|...+.++...|.. ++.+|+
T Consensus 147 ~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~ 200 (352)
T 1e3j_A 147 EGALLEPLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAKAYGAF---VVCTAR 200 (352)
T ss_dssp HHHTHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEES
T ss_pred HHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEcC
Confidence 443333455556677655433 467999999999998888888888864 887775
No 276
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=78.47 E-value=17 Score=39.41 Aligned_cols=114 Identities=13% Similarity=0.099 Sum_probs=75.3
Q ss_pred CCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCc-CCCce--EEEECc----c-hhhHHHHHHHHHc
Q psy14495 147 APECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKK-MKDCK--LVVSGA----G-AAALACLDLIIDL 216 (766)
Q Consensus 147 ~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~-l~d~~--iv~~Ga----G-~ag~gia~~l~~~ 216 (766)
.+.+.+.+.+|- ++||.| ||. .-.=+||=++.-.+..|.+ |+..| |.++|- | ...-..+..+...
T Consensus 145 ~~~~~~~lA~~~---~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~ 219 (359)
T 1zq6_A 145 EDQVLKSFAKYS---PVPVINMETIT--HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM 219 (359)
T ss_dssp TCHHHHHHHHHC---SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT
T ss_pred chHHHHHHHHhC---CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc
Confidence 345556666665 599999 777 5666788888777777765 99999 888998 5 1122334445567
Q ss_pred CCCCccEEEEcCC-ccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 217 GFPLQNIFVTDLA-GVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 217 g~~~~~i~~~D~~-Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
|+. |+++-.+ |+.-. +.+-..-+.+|+.. ...++.|+++++||+.-..+
T Consensus 220 G~~---v~~~~P~~~~~~~---~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w 274 (359)
T 1zq6_A 220 GMD---VTLLCPTPDYILD---ERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSW 274 (359)
T ss_dssp TCE---EEEECSSGGGCCC---HHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECC
T ss_pred CCE---EEEEcCccccCCC---HHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCc
Confidence 875 9999888 87321 11211122344332 23689999999999987665
No 277
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=78.38 E-value=2.5 Score=45.17 Aligned_cols=84 Identities=13% Similarity=0.203 Sum_probs=54.4
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc--CCCCHHHHhccCcEEEec
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT--TARTLSDIIPNADIFLGL 269 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~L~e~i~~~~vliG~ 269 (766)
++..||.|+|+|..|.++|..|.+.|. +++++|++. +. .. ..++.. ...++.|+++.+|+++ +
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~---~V~~~~~~~-------~~--~~--~~a~~~G~~~~~~~e~~~~aDvVi-l 78 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGV---DVTVGLRSG-------SA--TV--AKAEAHGLKVADVKTAVAAADVVM-I 78 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTT-------CH--HH--HHHHHTTCEEECHHHHHHTCSEEE-E
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcC---EEEEEECCh-------HH--HH--HHHHHCCCEEccHHHHHhcCCEEE-E
Confidence 345689999999999999999999996 488887642 10 01 111111 1127889999999877 5
Q ss_pred CCCCCCCHHHHH-hhc----cCcEEE
Q psy14495 270 SVSGVLKKEMVL-QMA----KNPIIL 290 (766)
Q Consensus 270 S~~g~ft~evv~-~M~----~~PiIf 290 (766)
+.|....+++++ .+. +..+|.
T Consensus 79 avp~~~~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 79 LTPDEFQGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp CSCHHHHHHHHHHHTGGGCCTTCEEE
T ss_pred eCCcHHHHHHHHHHHHhhCCCCCEEE
Confidence 553333377777 544 344554
No 278
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=78.37 E-value=1.9 Score=38.64 Aligned_cols=33 Identities=15% Similarity=0.392 Sum_probs=28.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|+|..|..+++.|.+.|. +++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 3589999999999999999999884 49999873
No 279
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=78.14 E-value=1.9 Score=45.67 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=30.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+..|+|+|||.+|+.+|..|.+.|.+ +.++|+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~---V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVK---TLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCC
Confidence 35799999999999999999999975 999998643
No 280
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=78.09 E-value=1.2 Score=45.87 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=29.4
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...+|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQ---PVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---CEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEccC
Confidence 356899999999999999999998865 7888864
No 281
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=78.03 E-value=3.7 Score=43.66 Aligned_cols=97 Identities=16% Similarity=0.233 Sum_probs=61.4
Q ss_pred ceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---c---c---CCCCHHHHhccCc
Q psy14495 195 CKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---D---T---TARTLSDIIPNAD 264 (766)
Q Consensus 195 ~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---~---~---~~~~L~e~i~~~~ 264 (766)
.||+|+| +|..|..++..|.+.|+- ..++++|.+.- . .....+.+ . . ...++.++++++|
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~-~ev~l~Di~~~----~-----~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLV-SVLHLYDVVNA----P-----GVTADISHMDTGAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTE-EEEEEEESSSH----H-----HHHHHHHTSCSSCEEEEEESHHHHHHHHTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEeCCCc----H-----hHHHHhhcccccceEEEEeCCCCHHHHcCCCC
Confidence 5899999 799999999999887752 36999996321 0 00001111 0 0 1236789999999
Q ss_pred EEEecCC----CC-----------CCCHHHHHhhc---cCcEEEeccCCCCccCH
Q psy14495 265 IFLGLSV----SG-----------VLKKEMVLQMA---KNPIILALANPLPEILP 301 (766)
Q Consensus 265 vliG~S~----~g-----------~ft~evv~~M~---~~PiIfaLsNPt~E~~p 301 (766)
++|=+.+ +| ..++++++.+. .+.+|+--|||.--+++
T Consensus 79 vVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~ 133 (326)
T 1smk_A 79 LIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVP 133 (326)
T ss_dssp EEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHH
T ss_pred EEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHH
Confidence 8763332 23 13455666555 46788889999755433
No 282
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=77.85 E-value=3.6 Score=46.15 Aligned_cols=93 Identities=11% Similarity=0.114 Sum_probs=62.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc--cccCCCCHHHHhcc---CcEEEe
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI--KDTTARTLSDIIPN---ADIFLG 268 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a--~~~~~~~L~e~i~~---~~vliG 268 (766)
..||.|+|+|..|..+|..|.+.|.. ++++|+.- +.....+..+. .-....++.|+++. +|++|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~---V~v~dr~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVi- 73 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYT---VAIYNRTT-------SKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIM- 73 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSH-------HHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEE-
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCE---EEEEcCCH-------HHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEE-
Confidence 46899999999999999999999974 88888631 11222222221 00123578998886 89877
Q ss_pred cCC-CCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 269 LSV-SGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 269 ~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
++. ++...+++++.+. +..+|.-+||-.+
T Consensus 74 lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 74 LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 444 3445567776554 4668889999764
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=77.79 E-value=1.7 Score=48.40 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=30.5
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..+|+|+|+|.||+.+|..|.+.|.+ +.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEecc
Confidence 457899999999999999999999975 9999985
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=77.78 E-value=2.1 Score=48.85 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=31.7
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+.+|||+|||.||+.+|..|.+.|++ +.++|+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 3467999999999999999999999975 99999874
No 285
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=77.75 E-value=2.8 Score=48.41 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=33.4
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
+++.+|+|+|||.||+.+|..|.+.|++ +.++|+.-.-
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCC
Confidence 5678999999999999999999999975 9999998443
No 286
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=77.69 E-value=1.9 Score=44.59 Aligned_cols=32 Identities=13% Similarity=0.228 Sum_probs=28.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
--|+|+|+|+||+.+|..+.+.|.+ +.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLK---TVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC---EEEEecC
Confidence 3589999999999999999999975 8999874
No 287
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.67 E-value=0.88 Score=48.90 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=60.9
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc---CCCCHHHHhccCcEEE--
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT---TARTLSDIIPNADIFL-- 267 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~~L~e~i~~~~vli-- 267 (766)
...||.|+|||..|.++|..|...|+- ..+.|+|.+-=..++-..+|.+. ..|.... ...++++ ++++|++|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~-~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~daDiVIit 96 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLA-DEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SAGSKLVVIT 96 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCC-SEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC-CeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hCCCCEEEEe
Confidence 346999999999999999999998873 26999997310000000012221 2333211 1235554 88999877
Q ss_pred -ecCC-CCC-------CC----HHHHHhhc---cCcEEEeccCCCC
Q psy14495 268 -GLSV-SGV-------LK----KEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 268 -G~S~-~g~-------ft----~evv~~M~---~~PiIfaLsNPt~ 297 (766)
|... +|- .+ +++++.+. ++.+|+-.|||.-
T Consensus 97 aG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd 142 (330)
T 3ldh_A 97 AGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT 142 (330)
T ss_dssp CSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH
Confidence 3332 341 12 23333333 6899999999964
No 288
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=77.63 E-value=3 Score=43.53 Aligned_cols=91 Identities=12% Similarity=0.160 Sum_probs=57.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC-CCCHHHHhccCcEEEecCCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT-ARTLSDIIPNADIFLGLSVS 272 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~-~~~L~e~i~~~~vliG~S~~ 272 (766)
..||.|+|+|..|.++|..|.+.|.. ++++|++- +.+...+..- ... ..++.|+++.+|++| ++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~~-------~~~~~~~~~g--~~~~~~~~~e~~~~aDvvi-~~vp 73 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS---TWGADLNP-------QACANLLAEG--ACGAAASAREFAGVVDALV-ILVV 73 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH-------HHHHHHHHTT--CSEEESSSTTTTTTCSEEE-ECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH-------HHHHHHHHcC--CccccCCHHHHHhcCCEEE-EECC
Confidence 35899999999999999999999964 88888731 1111211110 112 357889999999877 4442
Q ss_pred C-CCCHHHH-------HhhccCcEEEeccCCCC
Q psy14495 273 G-VLKKEMV-------LQMAKNPIILALANPLP 297 (766)
Q Consensus 273 g-~ft~evv-------~~M~~~PiIfaLsNPt~ 297 (766)
. .-.++++ ..+.+.-+|.-+|+-.|
T Consensus 74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~ 106 (303)
T 3g0o_A 74 NAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISS 106 (303)
T ss_dssp SHHHHHHHHC--CCCGGGSCTTCEEEECSCCCH
T ss_pred CHHHHHHHHhChhhHHhhCCCCCEEEecCCCCH
Confidence 2 2233443 23345667877877544
No 289
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=77.61 E-value=26 Score=36.97 Aligned_cols=111 Identities=12% Similarity=0.137 Sum_probs=71.3
Q ss_pred cccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchh---hHHHHHHHH
Q psy14495 140 INLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAA---ALACLDLII 214 (766)
Q Consensus 140 i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~a---g~gia~~l~ 214 (766)
|-+-.++. .+.+.+.+|- ++||.| |..+-.-.=+||=++.-.+..| +++..||+++|-|.= .-..+..+.
T Consensus 96 iviR~~~~-~~~~~la~~~---~vPVINagdg~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~ 170 (304)
T 3r7f_A 96 CVIRHSED-EYYEELVSQV---NIPILNAGDGCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLT 170 (304)
T ss_dssp EEEECSST-TCHHHHHHHC---SSCEEESCCTTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHH
T ss_pred EEEecCCh-hHHHHHHHhC---CCCEEeCCCCCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHH
Confidence 44444443 3344455665 599999 4234444556777766555555 699999999999742 223344455
Q ss_pred HcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecC
Q psy14495 215 DLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 215 ~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S 270 (766)
..|+. ++++-.+|+.-+. . .+ ....++.|+++++||+.-.+
T Consensus 171 ~~G~~---v~~~~P~~~~~~~----~-----~~---g~~~d~~eav~~aDvvyt~~ 211 (304)
T 3r7f_A 171 RLGAR---VLFSGPSEWQDEE----N-----TF---GTYVSMDEAVESSDVVMLLR 211 (304)
T ss_dssp HTTCE---EEEESCGGGSCTT----C-----SS---CEECCHHHHHHHCSEEEECC
T ss_pred HcCCE---EEEECCCccCcch----h-----hc---CccCCHHHHhCCCCEEEecc
Confidence 67875 9999888874311 0 11 12347999999999998765
No 290
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=77.57 E-value=2 Score=45.30 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=59.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC---CCCHHHHhccCcEEEec--
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT---ARTLSDIIPNADIFLGL-- 269 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~---~~~L~e~i~~~~vliG~-- 269 (766)
.||.|+|||..|.++|..|...|.- +++.|+|.+-=..++-.-++.+...+|-.... ..+ .++++++|++|=+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~-~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-CeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCC
Confidence 3899999999999999999988863 36999998421110000012222111212111 135 8899999976523
Q ss_pred -CC-CCC-------CC----HHHHHhhc---cCcEEEeccCCCC
Q psy14495 270 -SV-SGV-------LK----KEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 270 -S~-~g~-------ft----~evv~~M~---~~PiIfaLsNPt~ 297 (766)
.. +|. .| +++.+.+. ++-+|+-.|||.-
T Consensus 79 ~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd 122 (294)
T 1oju_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMD 122 (294)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcch
Confidence 22 442 12 23333333 6889999999964
No 291
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=77.44 E-value=9.8 Score=39.97 Aligned_cols=56 Identities=20% Similarity=0.350 Sum_probs=38.6
Q ss_pred CchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 170 QHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 170 ~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++...-.++..+.+.+..+. -..++|+|.|||..|...+.+++..|.. .++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~ak~~G~~--~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCAVALGAK--SVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHHHHTTCS--EEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHHHHcCCc--EEEEEec
Confidence 344433334444455554443 4577999999999998888888889977 6777776
No 292
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=77.42 E-value=1.9 Score=46.23 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=30.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+..|+|+|||.+|+.+|..|.+.|.+ +.++|+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~---V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHR---VLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCC
Confidence 35899999999999999999999976 999998643
No 293
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=77.39 E-value=2.4 Score=36.74 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=29.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|+|..|..+++.|.+.|.. +++++|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~--~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY--SVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE--EEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCC
Confidence 46899999999999999999999833 58888873
No 294
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=77.37 E-value=2 Score=46.61 Aligned_cols=90 Identities=14% Similarity=0.230 Sum_probs=56.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc-cc---cCCCCHHHHhccCcEEEe
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-KD---TTARTLSDIIPNADIFLG 268 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-~~---~~~~~L~e~i~~~~vliG 268 (766)
++.||+|+|+|..|-.+++.|.+. .+++++|++- +.+......+. .. .+..+|.++++++|++|-
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~R~~-------~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn 83 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE----FDVYIGDVNN-------ENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT----SEEEEEESCH-------HHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC----CeEEEEECCH-------HHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEE
Confidence 456999999999999999999876 3688888731 11111111111 00 123568899999999987
Q ss_pred cCCCCCCCHHHHHhhc-cCcEEEeccC
Q psy14495 269 LSVSGVLKKEMVLQMA-KNPIILALAN 294 (766)
Q Consensus 269 ~S~~g~ft~evv~~M~-~~PiIfaLsN 294 (766)
+ .|..+..++++.-. ..-.++-+|.
T Consensus 84 ~-~P~~~~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 84 A-LPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp C-CCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred C-CChhhhHHHHHHHHHhCCeEEEccC
Confidence 6 33224455554433 4455667776
No 295
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=77.36 E-value=29 Score=36.96 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=95.9
Q ss_pred HHHHHHHHHhCCCccccccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEEC
Q psy14495 124 DKLCDIIFSLEPTFGGINLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSG 201 (766)
Q Consensus 124 ~~~v~~v~~~~p~~g~i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~G 201 (766)
|.+-++++-+..-+-.|-+-.++ +.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| +++..||+++|
T Consensus 91 Esl~DTarvLs~~~D~iviR~~~-~~~~~~lA~~~---~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~glkva~vG 164 (323)
T 3gd5_A 91 EPVRDTARVLGRYVDGLAIRTFA-QTELEEYAHYA---GIPVINALTD-HEHPCQVVADLLTIRENFG-RLAGLKLAYVG 164 (323)
T ss_dssp CCHHHHHHHHTTTCSEEEEECSS-HHHHHHHHHHH---CSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEES
T ss_pred CCHHHHHHHHHHhCCEEEEecCC-hhHHHHHHHhC---CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEEC
Confidence 33444444333333344444443 34445555665 599999 53 3444556777766555555 69999999999
Q ss_pred cchhhHHHHHHH----HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-----cCCCCHHHHhccCcEEEecCC-
Q psy14495 202 AGAAALACLDLI----IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-----TTARTLSDIIPNADIFLGLSV- 271 (766)
Q Consensus 202 aG~ag~gia~~l----~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-----~~~~~L~e~i~~~~vliG~S~- 271 (766)
=| . -+++.+ ...|+. ++++=.+|+.-. +.+-..-+.+|+. +...++.|+++++||+.-..+
T Consensus 165 D~-~--rva~Sl~~~~~~~G~~---v~~~~P~~~~~~---~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wq 235 (323)
T 3gd5_A 165 DG-N--NVAHSLLLGCAKVGMS---IAVATPEGFTPD---PAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWT 235 (323)
T ss_dssp CC-C--HHHHHHHHHHHHHTCE---EEEECCTTCCCC---HHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC
T ss_pred CC-C--cHHHHHHHHHHHcCCE---EEEECCCcccCC---HHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEecee
Confidence 98 3 334433 346875 888888887321 1111111223322 123689999999999976653
Q ss_pred -CC---------------CCCHHHHHhhccCcEEEeccCC---CCccCHhhH
Q psy14495 272 -SG---------------VLKKEMVLQMAKNPIILALANP---LPEILPEDI 304 (766)
Q Consensus 272 -~g---------------~ft~evv~~M~~~PiIfaLsNP---t~E~~pe~a 304 (766)
-| -+|++.++.+.++-||+- .-| --|++.|-.
T Consensus 236 s~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mH-clPa~Rg~EI~~eV~ 286 (323)
T 3gd5_A 236 SMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLH-CLPAHRGEEITDEVM 286 (323)
T ss_dssp ---------CCHHHHTTCCBCHHHHHTSCTTCEEEE-CSCCCBTTTBCHHHH
T ss_pred cCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEEC-CCCCCCCceeCHHHh
Confidence 11 367777777666666652 224 348887633
No 296
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=77.19 E-value=1.9 Score=45.56 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=30.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
..|+|+|||.+|+.+|..|.+.|.+ +.++|+...
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCC
Confidence 5799999999999999999999975 999998643
No 297
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.18 E-value=1.5 Score=48.68 Aligned_cols=36 Identities=22% Similarity=0.081 Sum_probs=28.7
Q ss_pred CceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCccc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAGVL 232 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~Glv 232 (766)
..+|||+|||.||+.+|..|.+. |. ++.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~---~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEA---HVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTS---EEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCC---CEEEEECCCcc
Confidence 46899999999999999999987 54 59999987543
No 298
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.00 E-value=2.2 Score=40.71 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=31.3
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLA 229 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~ 229 (766)
++.+.+|+|+|+|..|..+++.|.+. |.. ++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKI---SLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSC---EEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCe---EEEEECC
Confidence 45677999999999999999999998 865 8888873
No 299
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=76.96 E-value=1.8 Score=46.34 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=29.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|+|+|||.+|+.+|..|.+.|++ +.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGID---NVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 4799999999999999999999986 99998854
No 300
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=76.92 E-value=2.4 Score=38.87 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=28.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|+|..|..+++.|.+.|.+ ++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIP---LVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 4799999999999999999999975 9999983
No 301
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=76.90 E-value=1.8 Score=45.00 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=29.5
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
...+|+|+|||.||+.+|..|.+.|.+ +.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELK---PLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCe---EEEEec
Confidence 346899999999999999999999875 889987
No 302
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=76.78 E-value=6.3 Score=42.16 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=29.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
-...+|+|+|||..|...+.+.+..|.. +++.+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~ 224 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGAS--RIIGVGT 224 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEECC
Confidence 3467999999999999999988888975 6888875
No 303
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=76.69 E-value=8.2 Score=41.19 Aligned_cols=46 Identities=24% Similarity=0.218 Sum_probs=33.9
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..+.++.....--..++|+|.|+|..|..++.++...|.. ++.+|+
T Consensus 176 ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~---Vi~~~~ 221 (363)
T 3uog_A 176 TAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE---VIVTSS 221 (363)
T ss_dssp HHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCE---EEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEec
Confidence 3445553333334567999999999999999999999974 887775
No 304
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=76.66 E-value=2.1 Score=46.45 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=32.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+..+|||+|||.||+.+|..|.+.|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~-~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFE-GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC-SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcC-CCEEEEecCCC
Confidence 356899999999999999999999865 26999998653
No 305
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=76.58 E-value=2 Score=47.33 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+.+|..|.+.|.+ +.++|+..
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 45899999999999999999999975 99998853
No 306
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=76.50 E-value=2.8 Score=45.53 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=55.7
Q ss_pred ceEEEECcchhhHHHHHHHHH-cCCCCccEEEEc---CCcc-cc---CCCCCCCc--HH-H--HHhcccc--CCCCHHHH
Q psy14495 195 CKLVVSGAGAAALACLDLIID-LGFPLQNIFVTD---LAGV-LY---KGRSELMD--SN-K--ARFIKDT--TARTLSDI 259 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D---~~Gl-v~---~~r~~~l~--~~-k--~~~a~~~--~~~~L~e~ 259 (766)
.||.|+|+|+.|..+|..|.+ .|. +++++| ++.- +. +.+.-.++ .. . ..+-... -..++.++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~---~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV---EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE---EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC---EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 489999999999999999977 474 488888 4210 00 00000000 00 0 0000000 12468889
Q ss_pred hccCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCC
Q psy14495 260 IPNADIFLGLSVSGVLKKEMVLQMA----KNPIILALANP 295 (766)
Q Consensus 260 i~~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNP 295 (766)
++.+|++| ++.+-...+++++.++ +..+|..++|-
T Consensus 80 ~~~aD~Vi-lav~~~~~~~v~~~l~~~l~~~~ivv~~~~~ 118 (404)
T 3c7a_A 80 ISGADVVI-LTVPAFAHEGYFQAMAPYVQDSALIVGLPSQ 118 (404)
T ss_dssp HTTCSEEE-ECSCGGGHHHHHHHHTTTCCTTCEEEETTCC
T ss_pred hCCCCEEE-EeCchHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 99999766 4443334688888887 35566665443
No 307
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=76.33 E-value=1.7 Score=47.62 Aligned_cols=37 Identities=27% Similarity=0.298 Sum_probs=30.9
Q ss_pred CCcCCCceEEEECcchhhHHHHHHHHHcC-CCCccEEEEcC
Q psy14495 189 KKKMKDCKLVVSGAGAAALACLDLIIDLG-FPLQNIFVTDL 228 (766)
Q Consensus 189 ~~~l~d~~iv~~GaG~ag~gia~~l~~~g-~~~~~i~~~D~ 228 (766)
+..+++..|||+|||.+|+.+|..|.+.| . ++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~G~~---~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVWSGG---SVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHHHCS---CEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhCCCC---cEEEEcc
Confidence 33456779999999999999999999998 5 5999998
No 308
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=76.14 E-value=1.8 Score=47.62 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...+|+|+|||.||+.+|..|.+.|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~-~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAF-DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCC-SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCC-CCeEEEecC
Confidence 356899999999999999999999972 259999986
No 309
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=76.05 E-value=2.3 Score=47.34 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=30.4
Q ss_pred ceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.||+.+|..|.+ .|.+..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Confidence 489999999999999999998 89763349999986
No 310
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=75.99 E-value=2.3 Score=47.14 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKR---VALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCc---EEEEcCC
Confidence 56899999999999999999998865 9999986
No 311
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=75.98 E-value=2.1 Score=48.84 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+.+|||+|||.||+.+|..|.+.|++ +.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 456999999999999999999999974 99999864
No 312
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=75.89 E-value=2.3 Score=47.83 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=31.5
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+.+|+|+|||.+|+..|-.|.+.|++ +.++|+.-
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCC
Confidence 567999999999999999999999987 88898764
No 313
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=75.88 E-value=5.7 Score=42.20 Aligned_cols=102 Identities=16% Similarity=0.171 Sum_probs=61.5
Q ss_pred CceEEEECc-chhhHHHHHHHHHcCCC----CccEEEEcCC--ccccCCCCC----CCcHHHHHhccc-cCCCCHHHHhc
Q psy14495 194 DCKLVVSGA-GAAALACLDLIIDLGFP----LQNIFVTDLA--GVLYKGRSE----LMDSNKARFIKD-TTARTLSDIIP 261 (766)
Q Consensus 194 d~~iv~~Ga-G~ag~gia~~l~~~g~~----~~~i~~~D~~--Glv~~~r~~----~l~~~k~~~a~~-~~~~~L~e~i~ 261 (766)
..||+|.|| |..|..++..|...|+- ...++++|.+ .- .+|.+ +|.+.-.++..+ ....++.++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~--~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKA--QKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHH--HHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccc--cccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 369999998 99999999999887762 2369999975 10 00000 011100012111 12367999999
Q ss_pred cCcEEEecCC----CCC-----------CCHHHHHhhcc----CcEEEeccCCCC
Q psy14495 262 NADIFLGLSV----SGV-----------LKKEMVLQMAK----NPIILALANPLP 297 (766)
Q Consensus 262 ~~~vliG~S~----~g~-----------ft~evv~~M~~----~PiIfaLsNPt~ 297 (766)
++|++|=+.+ +|. .++++++.+.+ +.+|+-.|||.-
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPAN 137 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchH
Confidence 9998763332 231 24556666653 447778899964
No 314
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=75.86 E-value=6.5 Score=42.03 Aligned_cols=46 Identities=20% Similarity=0.061 Sum_probs=33.6
Q ss_pred HHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 181 ILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 181 ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.+.++.....--...+|+|+|||..|...+.+++..|.. +++.+|+
T Consensus 178 a~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~--~Vi~~~~ 223 (373)
T 2fzw_A 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGAS--RIIGVDI 223 (373)
T ss_dssp HHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECS
T ss_pred HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcC
Confidence 334443223333567999999999999999998889975 6888875
No 315
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=75.72 E-value=2.3 Score=45.01 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=30.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+.+|..|.+.|.+ +.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYS---VHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCE---EEEEeccC
Confidence 46899999999999999999999965 99999864
No 316
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=75.41 E-value=2.5 Score=43.87 Aligned_cols=91 Identities=16% Similarity=0.132 Sum_probs=55.8
Q ss_pred ceEEEECcchhhHHHHHHHHHc-----CCCCccEEEEcCCccccCCCCCCCcHHHH-HhccccC-----------CCCHH
Q psy14495 195 CKLVVSGAGAAALACLDLIIDL-----GFPLQNIFVTDLAGVLYKGRSELMDSNKA-RFIKDTT-----------ARTLS 257 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~-----g~~~~~i~~~D~~Glv~~~r~~~l~~~k~-~~a~~~~-----------~~~L~ 257 (766)
.||.|+|+|+-|..+|..|.+. |. .+++++|+.. .+...+. .=.+-.. ..+-.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~--~~V~~~~r~~--------~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 78 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGL--LEVSWIARGA--------HLEAIRAAGGLRVVTPSRDFLARPTCVTDNP 78 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSS--EEEEEECCHH--------HHHHHHHHTSEEEECSSCEEEECCSEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCC--CCEEEEEcHH--------HHHHHHhcCCeEEEeCCCCeEEecceEecCc
Confidence 4899999999999999999987 71 3588888621 1122221 0001000 01234
Q ss_pred HHhccCcEEEecCCCCCCCHHHHHhhc----cCcEEEeccCCC
Q psy14495 258 DIIPNADIFLGLSVSGVLKKEMVLQMA----KNPIILALANPL 296 (766)
Q Consensus 258 e~i~~~~vliG~S~~g~ft~evv~~M~----~~PiIfaLsNPt 296 (766)
+.++.+|++| ++.+....+++++.+. +..+|..++|..
T Consensus 79 ~~~~~~D~vi-l~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~ 120 (317)
T 2qyt_A 79 AEVGTVDYIL-FCTKDYDMERGVAEIRPMIGQNTKILPLLNGA 120 (317)
T ss_dssp HHHCCEEEEE-ECCSSSCHHHHHHHHGGGEEEEEEEEECSCSS
T ss_pred cccCCCCEEE-EecCcccHHHHHHHHHhhcCCCCEEEEccCCC
Confidence 5677788766 4443333588888776 355777788864
No 317
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=75.40 E-value=2.1 Score=44.75 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=29.7
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...+|+|+|+|.||+.+|..|.+.|.+ +.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 456899999999999999999999876 8888864
No 318
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=75.38 E-value=2 Score=44.04 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=27.8
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.|+|+|+|+||+.+|..+.+.|.+ +.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~---v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---CEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEecC
Confidence 699999999999999999999976 8888874
No 319
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=75.32 E-value=2.2 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|||+|+|.||+.+|..|.+.|. ++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 4689999999999999999999986 49999986
No 320
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=75.12 E-value=1.4 Score=51.53 Aligned_cols=38 Identities=26% Similarity=0.402 Sum_probs=34.9
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|++.||+++|+|..|.-++..|...|+. +|.++|.+=
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~aGVG--~ItlvD~D~ 51 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLTGFS--HIDLIDLDT 51 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEECCB
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHcCCC--eEEEecCCE
Confidence 47788999999999999999999999998 899999873
No 321
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=75.06 E-value=2.4 Score=43.51 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=27.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|+|.||+..|..|.+.|.+ +.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIR---TGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 4799999999999999999998875 7778754
No 322
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=75.04 E-value=2.2 Score=47.17 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.||+..|..|.+.|.+ +.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~---V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLS---TAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 45899999999999999999999975 9999986
No 323
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=74.90 E-value=2.2 Score=47.37 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++.+|||+|+|.||+..|..|.+.|.+ +.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~---V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLK---VLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 356899999999999999999999864 99999863
No 324
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=74.85 E-value=2 Score=46.53 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=29.1
Q ss_pred ceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCCcc
Q psy14495 195 CKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLAGV 231 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~Gl 231 (766)
.+|||+|||.||+.+|..|.+ .|. ++.++|++--
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCC
Confidence 379999999999999999998 665 4999988753
No 325
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=74.81 E-value=2.6 Score=46.61 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.||+.+|..|.+.|.+ +.|+|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMK---TACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 45899999999999999999999975 9999986
No 326
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=74.81 E-value=1.5 Score=46.91 Aligned_cols=103 Identities=21% Similarity=0.245 Sum_probs=60.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC-CCCHHHHhccCcEEEecC-
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT-ARTLSDIIPNADIFLGLS- 270 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~-~~~L~e~i~~~~vliG~S- 270 (766)
...||.|+|||..|..+|..|...|+- ..++++|.+-=..++-.-+|.+. .+|..... ..+..++++++|++|=+.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~-~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA-QEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC-CeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcCCCEEEECCC
Confidence 346999999999999999999988873 37999998310000000011111 12222111 123467899999765232
Q ss_pred --C-CC-----CC------CHHHHHhhc---cCcEEEeccCCCC
Q psy14495 271 --V-SG-----VL------KKEMVLQMA---KNPIILALANPLP 297 (766)
Q Consensus 271 --~-~g-----~f------t~evv~~M~---~~PiIfaLsNPt~ 297 (766)
. +| .| -.++.+.|. ++.+|+-.|||.-
T Consensus 86 ~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvd 129 (326)
T 3vku_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 129 (326)
T ss_dssp CC----------------CHHHHHHHHHTTTCCSEEEECSSSHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchH
Confidence 2 33 22 235555554 6889999999974
No 327
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=74.78 E-value=2.4 Score=45.25 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.4
Q ss_pred CceEEEECcchhhHHHHHHHHH-cC-CCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID-LG-FPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~-~g-~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+.+|..|.+ .| .+ +.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~---V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITN---VAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCC---EEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCc---EEEEeCCC
Confidence 5689999999999999999999 89 65 99999864
No 328
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=74.77 E-value=2.3 Score=47.32 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+.+|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~---V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK---TLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC---EEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 456899999999999999999999875 9999986
No 329
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=74.62 E-value=2.4 Score=47.28 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+..|..|.+.|.+ +.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMK---VAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCC
Confidence 46899999999999999999999975 99999753
No 330
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=74.58 E-value=2.5 Score=45.94 Aligned_cols=36 Identities=25% Similarity=0.316 Sum_probs=31.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+..|||+|||.+|+.+|..|.+.|.+ ++.++|+...
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~--~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYT--NVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCC--cEEEEeCCCC
Confidence 45799999999999999999999984 6999998654
No 331
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=74.56 E-value=2.2 Score=47.13 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=29.2
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
||||+|+|.||+.+|..|.+.|.+ -+|.|+|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~-~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKE-SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSS-SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCC-CcEEEEeCCC
Confidence 799999999999999999998843 2699998764
No 332
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.14 E-value=5 Score=41.76 Aligned_cols=91 Identities=19% Similarity=0.147 Sum_probs=59.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCC-
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVS- 272 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~- 272 (766)
..||.|+|+|..|.++|..|.+.|.. ++++|++ . +.....+..=+ .-..++.|+++ +|++| ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~---V~~~dr~----~---~~~~~~~~~g~--~~~~~~~~~~~-aDvvi-~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGG---VTVYDIR----I---EAMTPLAEAGA--TLADSVADVAA-ADLIH-ITVLD 80 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTC---EEEECSS----T---TTSHHHHHTTC--EECSSHHHHTT-SSEEE-ECCSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEeCC----H---HHHHHHHHCCC--EEcCCHHHHHh-CCEEE-EECCC
Confidence 35899999999999999999999964 8888873 1 22333332211 12358999999 99877 4433
Q ss_pred CCCCHHHHHh----hccCcEEEeccCCCCc
Q psy14495 273 GVLKKEMVLQ----MAKNPIILALANPLPE 298 (766)
Q Consensus 273 g~ft~evv~~----M~~~PiIfaLsNPt~E 298 (766)
....+++++. +.+.-+|.-+|+-.|+
T Consensus 81 ~~~~~~v~~~l~~~l~~g~ivv~~st~~~~ 110 (296)
T 3qha_A 81 DAQVREVVGELAGHAKPGTVIAIHSTISDT 110 (296)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEECSCCCHH
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEeCCCCHH
Confidence 2223344433 4456788888875443
No 333
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=74.11 E-value=2.8 Score=47.51 Aligned_cols=36 Identities=31% Similarity=0.476 Sum_probs=31.4
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+.+|+|+|||.+|+.+|..|.+.|++ +.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 3456999999999999999999999985 99999864
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=74.11 E-value=8.6 Score=41.11 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=29.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
-...+|+|+|||..|..++.+++..|.. +++.+|+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~--~Vi~~~~ 225 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAK--RIIAVDL 225 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcC
Confidence 3567999999999999999999999975 6888875
No 335
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=74.06 E-value=2.4 Score=47.66 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=31.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
-++..|+|+|||.+|+..|..|.+.|++ +.++|+.-
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~ 44 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLV 44 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 4567899999999999999999999987 88888764
No 336
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=73.68 E-value=2.5 Score=45.60 Aligned_cols=32 Identities=28% Similarity=0.271 Sum_probs=28.8
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+|+|+|||.+|+.+|..|.+.|.+ +.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHE---VEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCc---eEEEeCCC
Confidence 799999999999999999999954 99998864
No 337
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=73.64 E-value=2.6 Score=46.16 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=29.0
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.||||+|+|.||+.+|..|.+.+-. -+|.|+|++-
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCC
Confidence 4799999999999999999887622 2699999864
No 338
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=73.57 E-value=2.8 Score=46.12 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=29.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|+|.||+..|..+.+.|.+ +.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~ 33 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMK---VGVVEKE 33 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCe---EEEEeCC
Confidence 4799999999999999999999875 9999986
No 339
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=73.51 E-value=7.8 Score=40.89 Aligned_cols=45 Identities=16% Similarity=0.297 Sum_probs=34.0
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..+.+++..+. -..++|+|.|||..|..++.++...|. +++.+|+
T Consensus 152 ta~~~l~~~~~-~~g~~VlV~GaG~vG~~~~~~a~~~Ga---~Vi~~~~ 196 (339)
T 1rjw_A 152 TTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGL---NVVAVDI 196 (339)
T ss_dssp HHHHHHHHHTC-CTTCEEEEECCSTTHHHHHHHHHHTTC---EEEEECS
T ss_pred HHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeC
Confidence 34556665532 245799999999999999999999996 4887775
No 340
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=73.40 E-value=2.6 Score=45.57 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=29.3
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+|+|+|||.+|+.+|..|.+.|.+ +.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~---V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHE---IIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCC
Confidence 799999999999999999999954 999998643
No 341
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=73.39 E-value=2.8 Score=45.54 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=32.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGR 236 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r 236 (766)
.+|||+|||.||+.+|..|.+.|.+ .+|.++|+..-..-+|
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~-~~V~li~~~~~~~y~~ 43 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFE-GRISLIGDEPHLPYDR 43 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC-SEEEEEECSSSSSBCS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcC-CeEEEEECCCCCCcCC
Confidence 4899999999999999999999864 3699998865443333
No 342
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=73.37 E-value=5.9 Score=42.21 Aligned_cols=47 Identities=13% Similarity=0.146 Sum_probs=35.7
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
...+.+++..+......+|+|.|+|..|...+.+++..|. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga---~Vi~~~~ 212 (357)
T 2cf5_A 166 VTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH---HVTVISS 212 (357)
T ss_dssp HHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC---EEEEEES
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEeC
Confidence 3445666655544367899999999999999998888896 3887776
No 343
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=73.32 E-value=2.8 Score=43.97 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=54.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccC------CCCH-HHHhccCcEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTT------ARTL-SDIIPNADIF 266 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~------~~~L-~e~i~~~~vl 266 (766)
.||.|+|+|+-|..+|..|. .|. +++++++..- .+...++.=.+ ..+ ..+. .++++.+|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~---~V~~~~r~~~-------~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~v 71 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH---DVTVVTRRQE-------QAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLL 71 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS---EEEEECSCHH-------HHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC---ceEEEECCHH-------HHHHHHhCCceEecCCCeecccccccccccCCCCEE
Confidence 58999999999999999999 774 5888887421 01111110000 000 0000 2345667887
Q ss_pred EecCCCCCCCHHHHHhhc---cCcEEEeccCCC
Q psy14495 267 LGLSVSGVLKKEMVLQMA---KNPIILALANPL 296 (766)
Q Consensus 267 iG~S~~g~ft~evv~~M~---~~PiIfaLsNPt 296 (766)
| ++.+.-..+++++.++ +.. |..+.|--
T Consensus 72 i-lavK~~~~~~~l~~l~~~~~~~-ivs~~nGi 102 (307)
T 3ego_A 72 V-VTVKQHQLQSVFSSLERIGKTN-ILFLQNGM 102 (307)
T ss_dssp E-ECCCGGGHHHHHHHTTSSCCCE-EEECCSSS
T ss_pred E-EEeCHHHHHHHHHHhhcCCCCe-EEEecCCc
Confidence 7 6654446788888886 344 77888875
No 344
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=73.31 E-value=2.7 Score=47.45 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=31.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+.+|||+|||.||+.+|..|.+.|.+ +.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGR---QLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 456899999999999999999999865 99999864
No 345
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=73.28 E-value=2.6 Score=46.54 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=29.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.||+..|..|.+.|.+ +.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~---V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFK---TTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCC---EEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 45799999999999999999999875 9999986
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=73.14 E-value=13 Score=39.09 Aligned_cols=49 Identities=10% Similarity=-0.025 Sum_probs=35.5
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.++..+.+++....--...+++|.|| |..|..++.++...|.. ++.+|+
T Consensus 150 ~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~---Vi~~~~ 199 (343)
T 2eih_A 150 TFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR---VIATAG 199 (343)
T ss_dssp HHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCE---EEEEES
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeC
Confidence 34444555554333335689999999 99999999999999964 887776
No 347
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=73.03 E-value=2.8 Score=42.42 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.7
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++++.++||+|+|..|...+++|.+.|.. ++++|.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap 62 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAP 62 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECC
Confidence 37889999999999999999999999975 888887
No 348
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=72.92 E-value=2.3 Score=46.59 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=29.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.||+..|-.|.+.|++ +.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCC
Confidence 5899999999999999999999986 8899875
No 349
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=72.92 E-value=2.7 Score=47.35 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=32.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
.+..|+|+|||.+|+.+|..|.+.|++ +.++|+.--.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCC
Confidence 356899999999999999999999986 8999987443
No 350
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=72.87 E-value=9.2 Score=42.13 Aligned_cols=31 Identities=16% Similarity=0.402 Sum_probs=27.9
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
||.|+|+|..|..+|..|.+.|. +++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~---~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH---EVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC---EEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---EEEEEECC
Confidence 79999999999999999999985 48999874
No 351
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=72.82 E-value=2.9 Score=45.60 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=30.9
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
-+..+|+|+|||.+|+.+|..|.+.|.+ +.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc---EEEEecc
Confidence 3467999999999999999999999964 8888886
No 352
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=72.73 E-value=2.6 Score=47.21 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
....+|+|+|||.||+.+|..|.+.|.. ++.++....
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~--~V~VlEa~~ 42 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQ--DCLVLEARD 42 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCC--SEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCC--CEEEEeCCC
Confidence 3456899999999999999999999922 488888763
No 353
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=72.68 E-value=6.9 Score=43.86 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=60.0
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc-----c-ccCCCCHHHHhcc---CcE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI-----K-DTTARTLSDIIPN---ADI 265 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a-----~-~~~~~~L~e~i~~---~~v 265 (766)
.||.|+|+|..|..+|..|.+.|.. ++++|+.. +.....+..+- . -....++.|+++. +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~---V~v~dr~~-------~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFK---VAVFNRTY-------SKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSH-------HHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCE---EEEEeCCH-------HHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCE
Confidence 3799999999999999999999964 88888731 11122222111 0 1123578888875 888
Q ss_pred EEecCC-CCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 266 FLGLSV-SGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 266 liG~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
+| ++. ++...+++++.+. +.-+|.-+||-.+
T Consensus 72 Vi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 72 AL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp EE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred EE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 76 444 3334556665543 5668888999764
No 354
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=72.63 E-value=2.9 Score=46.82 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=30.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+++|..|.+.|++ +.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCC---EEEEECCC
Confidence 45799999999999999999999976 99999864
No 355
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=72.57 E-value=27 Score=36.93 Aligned_cols=109 Identities=12% Similarity=0.024 Sum_probs=70.2
Q ss_pred chHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCC-CceEEEECcchhhHHHHHHH----HHcCCCCc
Q psy14495 149 ECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMK-DCKLVVSGAGAAALACLDLI----IDLGFPLQ 221 (766)
Q Consensus 149 ~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~-d~~iv~~GaG~ag~gia~~l----~~~g~~~~ 221 (766)
.+.+.+.+|- ++||.| || +-.-.=+||=++.-.+..| +++ ..||+++|=|. -+++.+ ...|+.
T Consensus 103 ~~~~~lA~~~---~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vGD~~---~va~Sl~~~~~~~G~~-- 172 (307)
T 3tpf_A 103 ETLLEFARYS---KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIGDSN---NMCNSWLITAAILGFE-- 172 (307)
T ss_dssp HHHHHHHHHC---SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEESCSS---HHHHHHHHHHHHHTCE--
T ss_pred HHHHHHHHhC---CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCC---ccHHHHHHHHHHcCCE--
Confidence 4444555554 599999 65 5556667777776555544 799 99999999963 344443 346875
Q ss_pred cEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 222 NIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 222 ~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
++++=.+|+.-. +.+-..-+.+|+.. ...++.|+++++||+.-..+
T Consensus 173 -v~~~~P~~~~~~---~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w 223 (307)
T 3tpf_A 173 -ISIAMPKNYKIS---PEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTW 223 (307)
T ss_dssp -EEEECCTTCCCC---HHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCS
T ss_pred -EEEECCCccCCC---HHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCc
Confidence 998888887321 11111222334332 23689999999999987664
No 356
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=72.56 E-value=2.5 Score=46.67 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|+|.||+.+|..|.+.|.+ +.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQK---CALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEcCC
Confidence 46899999999999999999998865 9999986
No 357
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=72.41 E-value=12 Score=39.74 Aligned_cols=83 Identities=11% Similarity=0.001 Sum_probs=49.9
Q ss_pred HHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---ccCCC-
Q psy14495 179 SAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---DTTAR- 254 (766)
Q Consensus 179 A~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---~~~~~- 254 (766)
+..+.+++..+. -..++|+|+|||..|..++.+++..|.. ++.+|+. . +.+...++.=|. +....
T Consensus 166 ~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~~~qlak~~Ga~---Vi~~~~~----~---~~~~~~~~lGa~~v~~~~~~~ 234 (360)
T 1piw_A 166 LTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAMGAE---TYVISRS----S---RKREDAMKMGADHYIATLEEG 234 (360)
T ss_dssp HHHHHHHHHTTC-STTCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESS----S---TTHHHHHHHTCSEEEEGGGTS
T ss_pred HHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCC----H---HHHHHHHHcCCCEEEcCcCch
Confidence 344566665332 2467999999999999999999888973 8888752 1 123333321122 11122
Q ss_pred CHHHHhc-cCcEEEecCCC
Q psy14495 255 TLSDIIP-NADIFLGLSVS 272 (766)
Q Consensus 255 ~L~e~i~-~~~vliG~S~~ 272 (766)
++.+.+. ++|++|=+++.
T Consensus 235 ~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 235 DWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp CHHHHSCSCEEEEEECCSC
T ss_pred HHHHHhhcCCCEEEECCCC
Confidence 5555554 46887766653
No 358
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=72.39 E-value=2.6 Score=45.20 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=28.2
Q ss_pred eEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLA 229 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~ 229 (766)
+|+|+|||.||+.+|..|.+. |++ +.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWA---IDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECC
Confidence 699999999999999999998 875 8889885
No 359
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=72.28 E-value=3 Score=46.17 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|||+|||.||+..|..|.+.|.+ +.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFK---TVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 35899999999999999999999875 99999864
No 360
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=72.26 E-value=2.7 Score=48.04 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=31.2
Q ss_pred CCceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCccc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAGVL 232 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~Glv 232 (766)
...+|||+|||.||+.+|..|.+. |. ++.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~---~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEED---EIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSS---EEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCC---CEEEEECCCCc
Confidence 456999999999999999999987 44 59999987543
No 361
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=72.18 E-value=2.7 Score=46.16 Aligned_cols=37 Identities=22% Similarity=0.199 Sum_probs=30.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
..+|||+|+|.||+.+|..|.+.|-. -++.++|+...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~-~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPE-WDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcC-CCEEEEECCCc
Confidence 46899999999999999999987421 25999998753
No 362
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=72.14 E-value=15 Score=40.98 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=66.1
Q ss_pred hCCcCCCceEEEECcc----------hhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHH
Q psy14495 188 VKKKMKDCKLVVSGAG----------AAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLS 257 (766)
Q Consensus 188 ~~~~l~d~~iv~~GaG----------~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~ 257 (766)
.+++++..||.|+|.. |..+.|++.|.+.|.. +.++|..-. +..+..|-.-.-..++.
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~---v~~~DP~~~---------~~~~~~~~~~~~~~~~~ 383 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGAT---VKAYDPEGV---------EQASKMLTDVEFVENPY 383 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCE---EEEECSSCH---------HHHGGGCSSCCBCSCHH
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCE---EEEECCCCC---------HhHHHhcCCceEecChh
Confidence 3778999999999986 7889999999999976 889998531 22333331111235789
Q ss_pred HHhccCcEEEecCCCC---CCCHHHHHhhccCcEEEeccC
Q psy14495 258 DIIPNADIFLGLSVSG---VLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 258 e~i~~~~vliG~S~~g---~ft~evv~~M~~~PiIfaLsN 294 (766)
|+++++|++|=+.... .++.+.++.+-+.|+||=.-|
T Consensus 384 ~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~r~ 423 (446)
T 4a7p_A 384 AAADGADALVIVTEWDAFRALDLTRIKNSLKSPVLVDLRN 423 (446)
T ss_dssp HHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSCBEECSSC
T ss_pred HHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCCEEEECCC
Confidence 9999999876444322 345566665445688886555
No 363
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=72.09 E-value=2.1 Score=45.03 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=28.5
Q ss_pred ceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.+|+.+|..|.+ .|++ +.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce---EEEEECC
Confidence 379999999999999999998 7865 9999975
No 364
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=72.06 E-value=3.1 Score=45.90 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=29.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|.|..|..++++|.+.|.+ ++++|++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~---vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVK---MVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 4799999999999999999999976 9999984
No 365
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=71.86 E-value=3.5 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKR---VAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCE---EEEEeCC
Confidence 46899999999999999999999975 9999984
No 366
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=71.81 E-value=5.9 Score=38.07 Aligned_cols=58 Identities=14% Similarity=0.229 Sum_probs=39.3
Q ss_pred cCCchhHH-HHHHHHHHHHhHhCCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 168 DDQHGTAI-IVGSAILNGLKLVKKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 168 DD~qGTa~-v~lA~ll~al~~~~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
|+.++.+. +.++..+.+++....--..++++|.| +|..|..+++++...|. +++.+|+
T Consensus 12 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~ 71 (198)
T 1pqw_A 12 ADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAG 71 (198)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEES
T ss_pred CHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeC
Confidence 34454443 45556666665433334568999999 58899999999999895 4888876
No 367
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.60 E-value=2.9 Score=46.07 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=29.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|+|+|||.||+..|..|.+.|.+ +.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQK---VTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 4799999999999999999999875 9999986
No 368
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=71.38 E-value=2.9 Score=43.05 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=30.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~G 230 (766)
.+..|+|+|+|.+|+.+|..|.+. |++ +.++|+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCC
Confidence 456899999999999999999986 865 88998864
No 369
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=71.35 E-value=2.6 Score=46.09 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=29.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.||+.+|..+.+.|.+ +.++|+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~ 36 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNG 36 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCC
Confidence 45799999999999999999999975 9999985
No 370
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.30 E-value=10 Score=42.23 Aligned_cols=93 Identities=18% Similarity=0.270 Sum_probs=0.0
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC---------ccccCCCCCCCcHHHHHhccccCC---CCHHHHhccC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA---------GVLYKGRSELMDSNKARFIKDTTA---RTLSDIIPNA 263 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~---------Glv~~~r~~~l~~~k~~~a~~~~~---~~L~e~i~~~ 263 (766)
||.|+|+|..|..+|..|.+.|.. ++++|.+ |.....- +++.+.-..-...... .++.|+++++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~---V~~~D~~~~~v~~l~~g~~~i~e-~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGAN---VRCIDTDRNKIEQLNSGTIPIYE-PGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE---EEEECSCHHHHHHHHHTCSCCCS-TTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCE---EEEEECCHHHHHHHHcCCCcccC-CCHHHHHHhhcccCcEEEECCHHHHHhcC
Q ss_pred cEEEecCCCCC----------CCHHHHHhhc----cCcEEEecc
Q psy14495 264 DIFLGLSVSGV----------LKKEMVLQMA----KNPIILALA 293 (766)
Q Consensus 264 ~vliG~S~~g~----------ft~evv~~M~----~~PiIfaLs 293 (766)
|++| ++.|-- ..+++++.+. +.-+|.-.|
T Consensus 80 DvVi-iaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 80 DIIF-IAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp SEEE-ECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred CEEE-EEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
No 371
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=71.26 E-value=11 Score=39.56 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=36.1
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.....+.+++..+.+ ...+++|+|||+.|...+.++...|-. +++.+|+
T Consensus 148 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~~g~--~Vi~~~~ 196 (348)
T 4eez_A 148 AGVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNVFGA--KVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTSCC--EEEEEES
T ss_pred ceeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHhCCC--EEEEEEC
Confidence 344456777776654 466999999999997777777777655 6888876
No 372
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=71.24 E-value=3.5 Score=45.64 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.||+..|..|.+.|.+ +.++|+++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~---V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYN---VLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCe---EEEEECCC
Confidence 35799999999999999999999975 99999654
No 373
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=71.22 E-value=2.2 Score=46.85 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=29.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCC--ccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPL--QNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~--~~i~~~D~~G 230 (766)
..+|||+|||.||+.+|..|.+.|... -++.++|+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG 68 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC
Confidence 347999999999999999999988210 1499999864
No 374
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.21 E-value=3.1 Score=46.59 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=29.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|||+|||.||+..|..+.+.|.+ +.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAK---VALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 5799999999999999999998865 99999863
No 375
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=71.16 E-value=4.6 Score=45.98 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=59.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHH-hccCcEEEecCCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDI-IPNADIFLGLSVS- 272 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~-i~~~~vliG~S~~- 272 (766)
.+++|+|.|..|..+|+.|.+.|.+ +.++|++-- +-+.+. ...+...++...|+++ ++++|++|-+...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~---v~vid~d~~----~~~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP---FILIDRQES----PVCNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCC----SSCCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC---EEEEECChH----HHhhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 7999999999999999999999876 999998632 211222 1111223455667665 5678988876652
Q ss_pred --CCCCHHHHHhhccCcEEEeccC
Q psy14495 273 --GVLKKEMVLQMAKNPIILALAN 294 (766)
Q Consensus 273 --g~ft~evv~~M~~~PiIfaLsN 294 (766)
..++--..|.+...+-|.+..|
T Consensus 420 ~~ni~~~~~ak~l~~~~~iiar~~ 443 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVARAN 443 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEES
T ss_pred hHHHHHHHHHHHHCCCCEEEEEEC
Confidence 2444455666666645555544
No 376
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=71.11 E-value=3.7 Score=45.44 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=29.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|+|+|||.||+.+|..|.+.|.+ +.++++..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~---v~v~E~~~ 72 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFK---TLLLEARD 72 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 6999999999999999999999965 88888863
No 377
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=71.10 E-value=5.3 Score=43.03 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=39.2
Q ss_pred chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 171 HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 171 qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++.....++..+.+++..+.--...+|+|.|+|..|...+.+++..|.. +++.+|+
T Consensus 173 ~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~ 228 (380)
T 1vj0_A 173 LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAE--NVIVIAG 228 (380)
T ss_dssp HHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBS--EEEEEES
T ss_pred hHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCc--eEEEEcC
Confidence 4433334555666665443023467999999999999999999988954 5888875
No 378
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=71.01 E-value=26 Score=37.09 Aligned_cols=117 Identities=9% Similarity=0.145 Sum_probs=72.9
Q ss_pred cccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcch-hhH--HHHHHHH
Q psy14495 140 INLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGA-AAL--ACLDLII 214 (766)
Q Consensus 140 i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~-ag~--gia~~l~ 214 (766)
|-+-.+. +.+.+.+.+|- ++||.| |..+-.-.=+||=++.-....| +++..||+++|=|. ..+ ..+..+.
T Consensus 100 iviR~~~-~~~~~~lA~~~---~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~ 174 (306)
T 4ekn_B 100 IVLRHPS-EGAARLASEYS---QVPIINAGDGSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALS 174 (306)
T ss_dssp EEEECSS-TTHHHHHHHHC---SSCEEESCSSSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHH
T ss_pred EEEEcCC-hHHHHHHHHhC---CCCEEeCCCCCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHH
Confidence 4444443 33445566665 599999 4244445556777766555555 69999999999975 232 2333344
Q ss_pred Hc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-----cCCCCHHHHhccCcEEEecCC
Q psy14495 215 DL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-----TTARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 215 ~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-----~~~~~L~e~i~~~~vliG~S~ 271 (766)
.. |+. +.++-.+|+- +++.-...++. ....++.|+++++||+.-..+
T Consensus 175 ~~~G~~---v~~~~P~~~~-------~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~ 227 (306)
T 4ekn_B 175 LFENVE---MYFVSPKELR-------LPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRI 227 (306)
T ss_dssp TSSSCE---EEEECCGGGC-------CCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCC
T ss_pred hcCCCE---EEEECCcccc-------cCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCc
Confidence 56 765 8888888873 22322222332 123689999999999986543
No 379
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=70.97 E-value=8.1 Score=43.29 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=60.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHH-Hhc-cc-cCCCCHHHHhc---cCcEEEe
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKA-RFI-KD-TTARTLSDIIP---NADIFLG 268 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~-~~a-~~-~~~~~L~e~i~---~~~vliG 268 (766)
.||.|+|+|..|..+|..|.+.|.+ ++++|+.. +.....+. ... .. ....++.|+++ .+|++|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~---V~v~dr~~-------~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVi- 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFV---VCAFNRTV-------SKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRII- 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC---EEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEE-
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCe---EEEEeCCH-------HHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEE-
Confidence 4799999999999999999999974 88888731 11222221 000 00 11357888875 788776
Q ss_pred cCC-CCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 269 LSV-SGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 269 ~S~-~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
++. ++...+++++.+. +..+|.-+||-.+
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 444 3334566666544 5668889999765
No 380
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=70.92 E-value=3.4 Score=46.22 Aligned_cols=36 Identities=28% Similarity=0.562 Sum_probs=30.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
..+|+|+|||.||+.+|..|.+.|.+ +.++++..-+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~---V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLN---VVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCC
Confidence 35799999999999999999999964 9999886443
No 381
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=70.88 E-value=3.1 Score=46.69 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=31.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
...+|+|+|||.||+..|..|.+.|++ +.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccc
Confidence 356899999999999999999999975 999998643
No 382
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.86 E-value=1.4 Score=49.28 Aligned_cols=89 Identities=13% Similarity=0.270 Sum_probs=55.2
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhc------cccCCCCHHHH-hccCcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFI------KDTTARTLSDI-IPNADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a------~~~~~~~L~e~-i~~~~vli 267 (766)
.||+|+|+|.-|..+|++|.+.|.+ ++++|++- +.+......|- ..+++..|.+| ++.+|+||
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~---v~vId~d~-------~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENND---ITIVDKDG-------DRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEE---EEEEESCH-------HHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC---EEEEECCH-------HHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 5899999999999999999887754 99999841 11222222221 11233457777 77889999
Q ss_pred ecCCC---CCCCHHHHHhhccCcEEEecc
Q psy14495 268 GLSVS---GVLKKEMVLQMAKNPIILALA 293 (766)
Q Consensus 268 G~S~~---g~ft~evv~~M~~~PiIfaLs 293 (766)
-+... ..+.-.+-|.+...|-+.+-.
T Consensus 74 a~t~~De~Nl~~~~~Ak~~~~~~~~iar~ 102 (461)
T 4g65_A 74 AVTNTDETNMAACQVAFTLFNTPNRIARI 102 (461)
T ss_dssp ECCSCHHHHHHHHHHHHHHHCCSSEEEEC
T ss_pred EEcCChHHHHHHHHHHHHhcCCccceeEe
Confidence 77652 233333445554444444433
No 383
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.84 E-value=3.1 Score=45.41 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=28.8
Q ss_pred ceEEEECcchhhHHHHHHHHH--cCCCCccEEEEcCCcc
Q psy14495 195 CKLVVSGAGAAALACLDLIID--LGFPLQNIFVTDLAGV 231 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~--~g~~~~~i~~~D~~Gl 231 (766)
.+|||+|||.||+.+|..|.+ .|. ++.++|+.--
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~---~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDL---KITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTC---EEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCC---eEEEECCCCC
Confidence 589999999999999999998 444 5999998643
No 384
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=70.78 E-value=2.5 Score=45.82 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=29.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
+.-||||+|||.||+.+|..|...|. +|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~---~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCD---DITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCS---CEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCC---EEEEEECCCCC
Confidence 34599999999999999999943333 59999987543
No 385
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=70.69 E-value=2.8 Score=46.13 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=29.4
Q ss_pred ceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCcc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAGV 231 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~Gl 231 (766)
.+|||+|+|.||+.+|..|.+. |. ++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~---~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQA---EISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSS---EEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCC---cEEEEECCCC
Confidence 4899999999999999999987 54 5999998653
No 386
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=70.61 E-value=3.5 Score=44.60 Aligned_cols=33 Identities=30% Similarity=0.526 Sum_probs=29.9
Q ss_pred ceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~G 230 (766)
..|+|+|||.+|+.+|..|.+. |.+ +.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCCC
Confidence 6899999999999999999998 975 99999864
No 387
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=70.57 E-value=3.7 Score=45.49 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=30.1
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+..|..|.+.|.+ +.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFN---TACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCC
Confidence 35899999999999999999999975 99999853
No 388
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=70.55 E-value=3.9 Score=42.09 Aligned_cols=34 Identities=26% Similarity=0.136 Sum_probs=28.7
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.--|+|+|||+||+.+|-.+.+.|.+ +.++|+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~ 38 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNN 38 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECS
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 345689999999999999889898875 8999975
No 389
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=70.50 E-value=51 Score=35.03 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=72.1
Q ss_pred cccccCCCCchHHHHHHHhhcCCCcEEe-cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHH---
Q psy14495 140 INLEDIKAPECFYIEKKLRNHMKIPVFH-DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIID--- 215 (766)
Q Consensus 140 i~~ED~~~~~af~il~~~~~~~~~~~fn-DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~--- 215 (766)
|-+-.++ +.+.+.+.+|- ++||.| .+.+-.-.=+||=++.-.+..| +++..||+++|-|. -+++.+..
T Consensus 105 iviR~~~-~~~~~~lA~~~---~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~---~va~Sl~~~~~ 176 (321)
T 1oth_A 105 VLARVYK-QSDLDTLAKEA---SIPIINGLSDLYHPIQILADYLTLQEHYS-SLKGLTLSWIGDGN---NILHSIMMSAA 176 (321)
T ss_dssp EEEECSC-HHHHHHHHHHC---SSCEEESCCSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCSS---HHHHHHHTTTG
T ss_pred EEEeCCC-hhHHHHHHHhC---CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCch---hhHHHHHHHHH
Confidence 4333333 33444455554 589999 2233344556777776666554 79999999999984 36666553
Q ss_pred -cCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecC
Q psy14495 216 -LGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 216 -~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S 270 (766)
.|+ +++++-.+|+--. +.+-..-+.+|+.. ...++.|+++++||+.-..
T Consensus 177 ~~G~---~v~~~~P~~~~~~---~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 177 KFGM---HLQAATPKGYEPD---ASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp GGTC---EEEEECCTTCCCC---HHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred HcCC---eEEEECCccccCC---HHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 465 4899888887321 11222222333322 2468999999999998744
No 390
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=70.47 E-value=3.1 Score=46.73 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
.+.+|+|+|||.||+.+|..|.+.|++ +.++|+.-.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCC
Confidence 346899999999999999999999976 999998753
No 391
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.40 E-value=3.6 Score=44.75 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=32.2
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
..+|||+|+|.||+.+|..|.+.|.+ .++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~-~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQ-GLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCC-SCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCC-CeEEEEECCCCC
Confidence 45899999999999999999998863 269999997644
No 392
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=70.32 E-value=5.7 Score=40.83 Aligned_cols=89 Identities=11% Similarity=0.154 Sum_probs=55.0
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCC-CCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSV-SGV 274 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~-~g~ 274 (766)
||.|+|+|..|..++..|.+.|. +++++|++. +.....+..-. .-..++.|+++.+|++| ++. ...
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~---~V~~~~~~~-------~~~~~~~~~g~--~~~~~~~~~~~~~Dvvi-~~vp~~~ 68 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY---PLIIYDVFP-------DACKEFQDAGE--QVVSSPADVAEKADRII-TMLPTSI 68 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC---CEEEECSST-------HHHHHHHTTTC--EECSSHHHHHHHCSEEE-ECCSSHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCC---EEEEEeCCH-------HHHHHHHHcCC--eecCCHHHHHhcCCEEE-EeCCCHH
Confidence 79999999999999999999886 488888631 11111111100 11357889999999877 343 222
Q ss_pred CCHHHHHh-------hccCcEEEeccCCCC
Q psy14495 275 LKKEMVLQ-------MAKNPIILALANPLP 297 (766)
Q Consensus 275 ft~evv~~-------M~~~PiIfaLsNPt~ 297 (766)
-.++++.. +.+..+|.-+|.-.+
T Consensus 69 ~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~ 98 (296)
T 2gf2_A 69 NAIEAYSGANGILKKVKKGSLLIDSSTIDP 98 (296)
T ss_dssp HHHHHHHSTTSGGGTCCTTCEEEECSCCCH
T ss_pred HHHHHHhCchhHHhcCCCCCEEEECCCCCH
Confidence 34566654 234556665554333
No 393
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=70.26 E-value=3.8 Score=44.24 Aligned_cols=36 Identities=28% Similarity=0.465 Sum_probs=30.3
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++.+|+|+|||.+|+.+|..|.+.|. .++.++++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~--~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGF--HDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC--CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCC--CcEEEEECCC
Confidence 45689999999999999999999983 2488888753
No 394
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=70.26 E-value=2.9 Score=47.60 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=30.5
Q ss_pred CCceEEEECcchhhHHHHHHHH-HcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLII-DLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~-~~g~~~~~i~~~D~~G 230 (766)
.+.+|||+|||.||+.+|..|. +.|++ +.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCC
Confidence 3468999999999999999999 88874 99999863
No 395
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=70.24 E-value=1.8 Score=48.92 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=27.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.||||+|+|.||+.+|+.|.+.+. +|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKY---NVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTC---EEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhhCCC---cEEEECCC
Confidence 489999999999999998876554 59999985
No 396
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=70.12 E-value=3.2 Score=45.95 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=28.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+|||+|||-+|+.+|..|.++|.+ +.++.+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~---V~VlEa~ 33 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIP---VLLLEQR 33 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCC---EEEECCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc---EEEEccC
Confidence 3799999999999999999999976 7777775
No 397
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.10 E-value=2.5 Score=45.37 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
.++||+|+|.||+.+|..|.+.| ++.|+|+.-..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCC
Confidence 48999999999999999998888 69999987544
No 398
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=69.93 E-value=3.4 Score=46.91 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+..|..|.+.|++ +.++|+.-
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVG---HLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 46899999999999999999999987 89999864
No 399
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=69.91 E-value=3.9 Score=43.98 Aligned_cols=83 Identities=12% Similarity=0.125 Sum_probs=52.9
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc---CCCCHHHHhcc----CcEEE
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT---TARTLSDIIPN----ADIFL 267 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~~L~e~i~~----~~vli 267 (766)
.||.|+|+|..|..+|..|.+.|. +++++|++ +.+...+... ...++.|+++. +|++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~---~V~~~dr~------------~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVi 73 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH---SVFGYNRS------------RSGAKSAVDEGFDVSADLEATLQRAAAEDALIV 73 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC---CEEEECSC------------HHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC---EEEEEeCC------------HHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEE
Confidence 489999999999999999999995 48888873 1122222211 12567777764 68877
Q ss_pred ecCCCCCCCHHHHHhhc---cCcEEEecc
Q psy14495 268 GLSVSGVLKKEMVLQMA---KNPIILALA 293 (766)
Q Consensus 268 G~S~~g~ft~evv~~M~---~~PiIfaLs 293 (766)
++.|-..++++++.+. +.-||.=.+
T Consensus 74 -lavP~~~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 74 -LAVPMTAIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp -ECSCHHHHHHHHHHHHHHCTTCCEEECC
T ss_pred -EeCCHHHHHHHHHHHHccCCCCEEEEcC
Confidence 5554334566666554 344444443
No 400
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=69.89 E-value=3.5 Score=45.79 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=32.5
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+++.+||.|+|.|.+|+++|++|.+.|.. +...|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 46788999999999999999999999976 8999985
No 401
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=69.80 E-value=7 Score=41.56 Aligned_cols=55 Identities=25% Similarity=0.282 Sum_probs=39.6
Q ss_pred chhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 171 HGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 171 qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++.....++..+.+++..+.+ ...+|+|+|||+.|...+.+++..|.. +++.+|+
T Consensus 150 ~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~ 204 (356)
T 1pl8_A 150 EGALIEPLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKAMGAA--QVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEEES
T ss_pred HHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECC
Confidence 443333455566677655433 457999999999999989988889975 6888876
No 402
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=69.79 E-value=3.5 Score=44.98 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=30.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+.+|+|+|||.+|+.+|..|.+.|.+ +.++++..-
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~ 39 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLS---VAVIEARDR 39 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 46899999999999999999999875 999988643
No 403
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=69.67 E-value=3.3 Score=47.02 Aligned_cols=34 Identities=15% Similarity=0.112 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~G 230 (766)
..+|||+|||.||...|..|.+ .|++ |.|+|+.-
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTAD---ITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSE---EEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCc---EEEEeCCC
Confidence 4689999999999999999999 7765 99999854
No 404
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=69.65 E-value=3.2 Score=43.83 Aligned_cols=99 Identities=20% Similarity=0.243 Sum_probs=60.4
Q ss_pred eEEEECc-chhhHHHHHHHHHcCCCCccEEEEcC--Cc-cccCCCCCCCcHHHHHhc-cccC----CCCHHHHhccCcEE
Q psy14495 196 KLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDL--AG-VLYKGRSELMDSNKARFI-KDTT----ARTLSDIIPNADIF 266 (766)
Q Consensus 196 ~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~--~G-lv~~~r~~~l~~~k~~~a-~~~~----~~~L~e~i~~~~vl 266 (766)
||+|.|| |..|..++..|...|.. ..++|+|. +- .+. +-..++.+.. ++. .+.+ ..++.++++++|++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~-~el~L~Di~~~~~~~~-~~~~dl~~~~-~~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFM-KDLVLIGREHSINKLE-GLREDIYDAL-AGTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTC-CEEEEEECGGGHHHHH-HHHHHHHHHH-TTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCC-CEEEEEcCCCchhhhH-HHHHHHHHhH-HhcCCCeEEEeCCcchHHHhCCCCEE
Confidence 8999999 99999999999887753 36999997 21 000 0000122211 232 1111 12478999999987
Q ss_pred EecCC----CCC-----------CCHHHHHhhcc--CcEEEeccCCCC
Q psy14495 267 LGLSV----SGV-----------LKKEMVLQMAK--NPIILALANPLP 297 (766)
Q Consensus 267 iG~S~----~g~-----------ft~evv~~M~~--~PiIfaLsNPt~ 297 (766)
|=+.+ +|. .++++++.|.+ +.+|+--|||.-
T Consensus 79 i~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~ 126 (313)
T 1hye_A 79 IITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVD 126 (313)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHH
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHH
Confidence 64432 332 24455555543 789999999964
No 405
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=69.60 E-value=2.3 Score=46.79 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=29.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|+|+|||.||+.+|..|.+.|++ +.++|++-
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCC
Confidence 5799999999999999999999976 89998854
No 406
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=69.40 E-value=3.3 Score=48.52 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=30.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|||+|+|.||+.+|..|.+.|.+ +.|+|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~---V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYD---VVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCe---EEEEecCC
Confidence 35899999999999999999999865 99999863
No 407
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=69.34 E-value=2.4 Score=44.71 Aligned_cols=111 Identities=16% Similarity=0.113 Sum_probs=63.4
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccC--CCCHHHHhccCcEEEecCC-
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTT--ARTLSDIIPNADIFLGLSV- 271 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~--~~~L~e~i~~~~vliG~S~- 271 (766)
.||.|+|||.-|..+|-+|+..|+- ..+.|+|..-=..++-.-+|.+.-..+-..+. ..+-.+.++++|++|=+.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC-CEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCC
Confidence 3899999999999999999887764 37999997421111100123222111111111 1233567899998763332
Q ss_pred ---CCC-------CCHHHHHhh----c---cCcEEEeccCCCCccCHhhHhcc
Q psy14495 272 ---SGV-------LKKEMVLQM----A---KNPIILALANPLPEILPEDIKSV 307 (766)
Q Consensus 272 ---~g~-------ft~evv~~M----~---~~PiIfaLsNPt~E~~pe~a~~~ 307 (766)
||. .+-++++.. + ++.+|.-.|||.--.++ .+++.
T Consensus 80 prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~-i~~k~ 131 (294)
T 2x0j_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTY-IMWKE 131 (294)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHH-HHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHH-hhHHH
Confidence 552 122333333 2 58999999999644444 24444
No 408
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=69.22 E-value=3.3 Score=46.11 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=29.7
Q ss_pred ceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCccc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAGVL 232 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~Glv 232 (766)
.+|||+|+|.||+.+|..|.+. |. ++.++|+....
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~---~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENA---NVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTC---EEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCC---cEEEEECCCCC
Confidence 5899999999999999999986 54 59999987543
No 409
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=69.20 E-value=2.1 Score=48.90 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=35.3
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++|++.||+++|+|..|.-++..|...|+. +|.++|.+=
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~aGVg--~itlvD~D~ 66 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLPGIG--SFTIIDGNQ 66 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTTTCS--EEEEECCCB
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHcCCC--eEEEEeCCE
Confidence 457889999999999999999999999997 899999863
No 410
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=69.19 E-value=3.5 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=30.1
Q ss_pred CceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~G 230 (766)
..+|||+|||.||+.+|..|.+ .|++ +.|+|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCCC
Confidence 4689999999999999999999 8875 99999853
No 411
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=69.16 E-value=3.8 Score=45.16 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=29.3
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..|+|+|||.||+.+|-.|.+.|.+ +.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~---V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGAN---VLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEECCC
Confidence 5799999999999999999999965 99999853
No 412
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=68.98 E-value=4 Score=45.34 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=30.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.||+..|..|.+.|.+ +.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLK---VAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 35899999999999999999999975 99999853
No 413
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=68.70 E-value=2.8 Score=46.82 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=28.4
Q ss_pred ceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~G 230 (766)
.+|||+|+|.||..+|..|.+ .|++ +.|+|+.-
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~---V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRID---VTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSE---EEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCE---EEEEecCC
Confidence 479999999999999999999 8875 99999853
No 414
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=68.66 E-value=12 Score=39.02 Aligned_cols=50 Identities=18% Similarity=0.166 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhHhCCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 176 IVGSAILNGLKLVKKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 176 v~lA~ll~al~~~~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..++..+.+++....--..++++|.| +|..|..++.++...|. +++.+|+
T Consensus 123 ~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~ 173 (327)
T 1qor_A 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVG 173 (327)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEES
T ss_pred hHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeC
Confidence 34455566665333333568999999 69999999999999996 4888876
No 415
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=68.62 E-value=10 Score=39.79 Aligned_cols=45 Identities=20% Similarity=0.387 Sum_probs=33.7
Q ss_pred HHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..+.+++..+ .-..++|+|.|||..|...+.+++..|.+ ++.+|+
T Consensus 154 ta~~~l~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~ 198 (340)
T 3s2e_A 154 TVYKGLKVTD-TRPGQWVVISGIGGLGHVAVQYARAMGLR---VAAVDI 198 (340)
T ss_dssp HHHHHHHTTT-CCTTSEEEEECCSTTHHHHHHHHHHTTCE---EEEEES
T ss_pred HHHHHHHHcC-CCCCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeC
Confidence 3455665443 33567999999999999999999989974 887766
No 416
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=68.50 E-value=3.4 Score=41.86 Aligned_cols=88 Identities=16% Similarity=0.152 Sum_probs=51.7
Q ss_pred eEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-ccCCCCHHHHhccCcEEEecCCCCC
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-DTTARTLSDIIPNADIFLGLSVSGV 274 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~L~e~i~~~~vliG~S~~g~ 274 (766)
||.|+|+|..|..+|..|.+.|. +++++|+. +. ++....+.+ ... .++.|+++.+|++| ++.+..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~---~V~~~~~~------~~---~~~~~~~~~~g~~-~~~~~~~~~aDvvi-~~v~~~ 67 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV---EVVTSLEG------RS---PSTIERARTVGVT-ETSEEDVYSCPVVI-SAVTPG 67 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC---EEEECCTT------CC---HHHHHHHHHHTCE-ECCHHHHHTSSEEE-ECSCGG
T ss_pred eEEEEechHHHHHHHHHHHHCCC---eEEEeCCc------cC---HHHHHHHHHCCCc-CCHHHHHhcCCEEE-EECCCH
Confidence 79999999999999999999886 47776651 11 111112211 111 56888899999876 444221
Q ss_pred CCHHHHHhhcc--CcEEEeccCCCC
Q psy14495 275 LKKEMVLQMAK--NPIILALANPLP 297 (766)
Q Consensus 275 ft~evv~~M~~--~PiIfaLsNPt~ 297 (766)
...+.+..+.+ +|+|+-+|.-.+
T Consensus 68 ~~~~~~~~~~~~~~~~vi~~s~~~~ 92 (264)
T 1i36_A 68 VALGAARRAGRHVRGIYVDINNISP 92 (264)
T ss_dssp GHHHHHHHHHTTCCSEEEECSCCCH
T ss_pred HHHHHHHHHHHhcCcEEEEccCCCH
Confidence 11223343332 336666654433
No 417
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=68.38 E-value=3.4 Score=46.76 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=30.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
.||||+|||.||+.+|..|.+.|-. -+|.++|+....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~-~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSET-AEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSS-SEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcC-CCEEEEECCCCc
Confidence 4899999999999999999987422 259999987543
No 418
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=68.10 E-value=7.7 Score=36.80 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=45.1
Q ss_pred CceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc-c-cCCCCHHHHhccCcEEEecC
Q psy14495 194 DCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK-D-TTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 194 d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~-~-~~~~~L~e~i~~~~vliG~S 270 (766)
..+|+|.|| |--|-.+++.|.+.|. ++++++++.- +.+.+...+..+.. + .+..++.++++++|++|=+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 368999998 9999999999999984 5888887531 10001000001111 1 23346788888899998766
Q ss_pred C
Q psy14495 271 V 271 (766)
Q Consensus 271 ~ 271 (766)
+
T Consensus 76 ~ 76 (206)
T 1hdo_A 76 G 76 (206)
T ss_dssp C
T ss_pred c
Confidence 5
No 419
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=68.01 E-value=4 Score=43.80 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=29.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|||+|||.||+.+|..|.+.|.+. ++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~-~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGET-PLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSS-CEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCC-CEEEEECC
Confidence 357999999999999999999988532 58888865
No 420
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=67.98 E-value=3.4 Score=45.32 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=28.7
Q ss_pred ceEEEECcchhhHHHHHHHHH---cCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIID---LGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~---~g~~~~~i~~~D~~G 230 (766)
.+|||+|||.||+.+|..|.+ .|.+ +.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~---Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHE---VTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSE---EEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCE---EEEEeCCC
Confidence 589999999999999999988 5654 99999864
No 421
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=67.94 E-value=3.6 Score=46.34 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHH------------cCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID------------LGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~------------~g~~~~~i~~~D~~G 230 (766)
..+|||+|+|.||...|..|.+ .|++ +.|+++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~---V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLN---ITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCE---EEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCe---EEEEeCCC
Confidence 4689999999999999999998 7875 99999853
No 422
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=67.78 E-value=3.6 Score=44.52 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=29.7
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++.+|+|+|||.+|+.+|..|.+.|. ++.++|+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEec
Confidence 34689999999999999999999885 49999885
No 423
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=67.68 E-value=3.3 Score=46.01 Aligned_cols=34 Identities=9% Similarity=0.282 Sum_probs=29.4
Q ss_pred CCceEEEECcchhhHHHHHHHHH-c------CCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIID-L------GFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~-~------g~~~~~i~~~D~~ 229 (766)
+..+|+|+|+|.||+.+|..|.+ . |. ++.++|+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~ 42 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEML 42 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecC
Confidence 35689999999999999999988 6 65 49999986
No 424
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=67.60 E-value=4.4 Score=45.35 Aligned_cols=31 Identities=32% Similarity=0.299 Sum_probs=28.5
Q ss_pred CceEEEECcchhhHHHHHHHHH-cCCCCccEEEEc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID-LGFPLQNIFVTD 227 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D 227 (766)
+.+|+|+|||.||+..|..+.+ .|.+ +.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKR---VAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCe---EEEEe
Confidence 4689999999999999999999 8975 99999
No 425
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=67.56 E-value=3.9 Score=45.19 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..|+|+|+|.||+..|..|.+.|.+ +.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLK---TALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCC---EEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 45799999999999999999999975 9999986
No 426
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=67.40 E-value=4.3 Score=44.78 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=29.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..|+|+|||.||+.+|..|.+.|.+ +.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~---V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKK---VAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 45899999999999999999999975 9999984
No 427
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.37 E-value=3.7 Score=45.36 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=29.1
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|||+|||.||+.+|..+.+.|.+ +.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIP---TVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCC---EEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCE---EEEEccC
Confidence 35799999999999999999998864 9999984
No 428
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=67.33 E-value=3.7 Score=42.96 Aligned_cols=35 Identities=14% Similarity=0.354 Sum_probs=29.4
Q ss_pred CCCceEEEECcchhhHHHHHHHHH--cCCCCccEEEEcCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIID--LGFPLQNIFVTDLA 229 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~--~g~~~~~i~~~D~~ 229 (766)
..+.-|+|+|||+||+.+|..|.+ .|++ +.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECC
Confidence 456679999999999999999975 4876 8899875
No 429
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=67.31 E-value=11 Score=40.30 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=34.5
Q ss_pred HHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 178 GSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 178 lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
....+.+++..+.+ ..++|+|+|||..|..++.++...|.. ++.+|+
T Consensus 180 ~~tA~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~---Vi~~~~ 226 (369)
T 1uuf_A 180 GITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAH---VVAFTT 226 (369)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEES
T ss_pred HHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeC
Confidence 33445666654322 467999999999998888888888864 887775
No 430
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=67.25 E-value=64 Score=34.77 Aligned_cols=113 Identities=12% Similarity=0.092 Sum_probs=70.2
Q ss_pred chHHHHHHHhhcCCCcEEecCC-chhHHHHHHHHHHHHhHhC-CcCCCceEEEECcchhhHH--HHHHHHHcCCCCccEE
Q psy14495 149 ECFYIEKKLRNHMKIPVFHDDQ-HGTAIIVGSAILNGLKLVK-KKMKDCKLVVSGAGAAALA--CLDLIIDLGFPLQNIF 224 (766)
Q Consensus 149 ~af~il~~~~~~~~~~~fnDD~-qGTa~v~lA~ll~al~~~~-~~l~d~~iv~~GaG~ag~g--ia~~l~~~g~~~~~i~ 224 (766)
.+.+.+.+|- .+||.|=|- +---.=+|+=++.-.+..| +++++.+|+++|-+...++ .+..+...|+. +.
T Consensus 137 ~~~~~la~~s---~vPVING~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~---v~ 210 (358)
T 4h31_A 137 AIVEELGAFA---GVPVWNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMD---IR 210 (358)
T ss_dssp HHHHHHHHHS---SSCEEESCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCE---EE
T ss_pred hHHHHhhhhc---cCceECCCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCce---EE
Confidence 3344444544 599999432 2235557777777665554 5799999999998742222 23334456875 99
Q ss_pred EEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecC
Q psy14495 225 VTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 225 ~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S 270 (766)
++-.+|+.-. +.+.+.-+.+|... ...++.|+++++||+.-..
T Consensus 211 ~~~P~~~~p~---~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~ 258 (358)
T 4h31_A 211 LVGPQAYWPD---EELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDV 258 (358)
T ss_dssp EESCGGGSCC---HHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred EeCCcccCCC---HHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEE
Confidence 9999887432 12222223344332 2368999999999998544
No 431
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=67.19 E-value=4.7 Score=41.77 Aligned_cols=96 Identities=15% Similarity=0.071 Sum_probs=55.8
Q ss_pred HHHHHHHHHhHhCCcCCCceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc---cC
Q psy14495 177 VGSAILNGLKLVKKKMKDCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD---TT 252 (766)
Q Consensus 177 ~lA~ll~al~~~~~~l~d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~---~~ 252 (766)
.++..+.+++..+ --...+|+|.|| |..|..++.++...|. +++.+|+. .. .+...++.-+.. ..
T Consensus 110 ~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~----~~---~~~~~~~~ga~~~~~~~ 178 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASR----PE---KLALPLALGAEEAATYA 178 (302)
T ss_dssp HHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESS----GG---GSHHHHHTTCSEEEEGG
T ss_pred HHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCC----HH---HHHHHHhcCCCEEEECC
Confidence 3444555665444 335689999998 9999999999999996 48888873 11 222222211211 11
Q ss_pred C-CCHHHHhccCcEEEecCCCCCCCHHHHHhhcc
Q psy14495 253 A-RTLSDIIPNADIFLGLSVSGVLKKEMVLQMAK 285 (766)
Q Consensus 253 ~-~~L~e~i~~~~vliG~S~~g~ft~evv~~M~~ 285 (766)
. .++.+.++++|++|= .+. ...+..++.|++
T Consensus 179 ~~~~~~~~~~~~d~vid-~g~-~~~~~~~~~l~~ 210 (302)
T 1iz0_A 179 EVPERAKAWGGLDLVLE-VRG-KEVEESLGLLAH 210 (302)
T ss_dssp GHHHHHHHTTSEEEEEE-CSC-TTHHHHHTTEEE
T ss_pred cchhHHHHhcCceEEEE-CCH-HHHHHHHHhhcc
Confidence 1 234455556788876 442 334455555543
No 432
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=67.17 E-value=5 Score=43.07 Aligned_cols=109 Identities=16% Similarity=0.255 Sum_probs=63.9
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccc-----cCCCCHHHHhccCcEEEec
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKD-----TTARTLSDIIPNADIFLGL 269 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~-----~~~~~L~e~i~~~~vliG~ 269 (766)
.||+|+|||-.|-.+++.|.+. .++.+.|... +.+...+ .++.. .+..+|.+.++++|++|-+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~~----~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKDE----FDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHhcC----CCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 4799999999999999988642 3677777631 1122221 22221 2335688999999999854
Q ss_pred CCCCCCCHHHHHhhcc-CcEEEeccCCCCc--cCHhhHhcccCcEEEEcC
Q psy14495 270 SVSGVLKKEMVLQMAK-NPIILALANPLPE--ILPEDIKSVRNDAIIATG 316 (766)
Q Consensus 270 S~~g~ft~evv~~M~~-~PiIfaLsNPt~E--~~pe~a~~~~~~ai~atG 316 (766)
- |.-+..++++.-.+ .==++-+|--.++ ..-++|.+.+-.+|...|
T Consensus 85 ~-p~~~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G 133 (365)
T 3abi_A 85 L-PGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp C-CGGGHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred c-CCcccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCC
Confidence 4 45577777777652 2235556643222 222344444434454455
No 433
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=67.04 E-value=2.3 Score=45.40 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=28.3
Q ss_pred CCceEEEECcchhhHHH-HHHH-HHcCCCCccEEEEcC
Q psy14495 193 KDCKLVVSGAGAAALAC-LDLI-IDLGFPLQNIFVTDL 228 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gi-a~~l-~~~g~~~~~i~~~D~ 228 (766)
+.++|+|+|||..|... +.++ +..|.. +++.+|+
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~--~Vi~~~~ 207 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYE--NLYCLGR 207 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCC--EEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCc--EEEEEeC
Confidence 33899999999999888 8888 778875 6998887
No 434
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=66.89 E-value=4.3 Score=44.98 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+.+|+|+|+|.||+..|..|.+.|.+ +.++|++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~---V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGAR---AAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 346899999999999999999999976 9999965
No 435
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=66.82 E-value=4.2 Score=48.01 Aligned_cols=34 Identities=21% Similarity=0.484 Sum_probs=30.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|||+|||.||+.+|..|.+.|.+ +.|+|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~---Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYT---VHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 46899999999999999999999865 99999863
No 436
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=66.74 E-value=3.9 Score=44.88 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=29.5
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+.+|+|+|||.+|+.+|..|.+.|.+ +.++++..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~---v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTD---AVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCC---EEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCC
Confidence 35899999999999999999999975 89998863
No 437
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=66.72 E-value=5.1 Score=43.88 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=31.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
..+|||+|+|.||+.+|..|.+.|.+ .++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~-~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWE-GNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcC-CCEEEEECCCC
Confidence 36899999999999999999999863 26999998643
No 438
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=66.68 E-value=18 Score=37.78 Aligned_cols=44 Identities=16% Similarity=0.030 Sum_probs=33.0
Q ss_pred HHHHhHhCCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 182 LNGLKLVKKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 182 l~al~~~~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
+.+++....--..++++|.| +|..|..++.++...|.+ ++.+|+
T Consensus 137 ~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~ 181 (334)
T 3qwb_A 137 LSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAH---TIAVAS 181 (334)
T ss_dssp HHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEES
T ss_pred HHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeC
Confidence 33444333444678999999 799999999999999974 887776
No 439
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=66.53 E-value=3.9 Score=44.96 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=28.4
Q ss_pred eEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCc
Q psy14495 196 KLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAG 230 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~G 230 (766)
+|||+|+|.||+.+|..|.+. |. ++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~---~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDA---DVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTC---EEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCC---cEEEEECCC
Confidence 699999999999999999987 65 499999865
No 440
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=66.41 E-value=4.7 Score=44.25 Aligned_cols=36 Identities=22% Similarity=0.136 Sum_probs=30.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|+|+|||.+|+.+|..|.+.|- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~-~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFP-DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCT-TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCC-CCCEEEEECCC
Confidence 5689999999999999999999981 12599999864
No 441
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=66.35 E-value=5.5 Score=43.68 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=30.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+.+|+|+|||.+|+.+|..|.+.|.+ +.++|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~---v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQR---VLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCc---eEEEecc
Confidence 456899999999999999999998865 8999885
No 442
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=66.33 E-value=4.9 Score=46.00 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=30.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
+..|+|+|+|.+|+++|..|.+.|++ +.|+|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~---V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIK---TGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 46899999999999999999999976 99999864
No 443
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=66.27 E-value=3.3 Score=43.59 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=28.3
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
...|+|+|||.+|+.+|..|. .|.+ +.++|+.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~---V~vlE~~ 40 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGR---VVVLERE 40 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSC---EEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCC---EEEEECC
Confidence 468999999999999999999 5865 9999986
No 444
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=66.25 E-value=3.5 Score=46.05 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.5
Q ss_pred ceEEEECcchhhHHHHHHHHHc---CCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDL---GFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~---g~~~~~i~~~D~~G 230 (766)
.+|||+|||.||+.+|..|.+. |.+ +.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~---V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQ---VTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEE---EEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCE---EEEEeCCC
Confidence 5799999999999999999998 864 99999874
No 445
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=65.74 E-value=4.1 Score=44.73 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=28.6
Q ss_pred eEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCcc
Q psy14495 196 KLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAGV 231 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~Gl 231 (766)
+|||+|+|.||+.+|..|.+. |. ++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~---~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDA---EIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTS---EEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCC---eEEEEECCCc
Confidence 799999999999999999987 54 5999998653
No 446
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=65.52 E-value=47 Score=34.94 Aligned_cols=113 Identities=11% Similarity=0.128 Sum_probs=72.2
Q ss_pred cccccCCCCchHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHH----
Q psy14495 140 INLEDIKAPECFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLI---- 213 (766)
Q Consensus 140 i~~ED~~~~~af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l---- 213 (766)
|-+-.++ +.+.+.+.+|- ++||.| |-.+-.-.=+||=++.-.+..| +++..||+++|-|.=+ -+++.+
T Consensus 98 iviR~~~-~~~~~~la~~~---~vPVINaG~g~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rva~Sl~~~~ 171 (299)
T 1pg5_A 98 IVMRHKY-DGASRFASEIS---DIPVINAGDGKHEHPTQAVIDIYTINKHFN-TIDGLVFALLGDLKYA-RTVNSLLRIL 171 (299)
T ss_dssp EEEEESS-BTHHHHHHHHC---SSCEEEEEETTTBCHHHHHHHHHHHHHHHS-CSTTCEEEEEECCSSC-HHHHHHHHHG
T ss_pred EEEeCCC-hhHHHHHHHhC---CCCEEeCCCCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-chHHHHHHHH
Confidence 4444443 34455566665 599999 3344455567777777666655 7999999999997321 233333
Q ss_pred HHc-CCCCccEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 214 IDL-GFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 214 ~~~-g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
... |+. +.++-.+|+-- ++. +++.. ...++.|+++++||+.-..+
T Consensus 172 ~~~~g~~---v~~~~P~~~~~-------~~~---~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 222 (299)
T 1pg5_A 172 TRFRPKL---VYLISPQLLRA-------RKE---ILDELNYPVKEVENPFEVINEVDVLYVTRI 222 (299)
T ss_dssp GGSCCSE---EEEECCGGGCC-------CHH---HHTTCCSCEEEESCGGGTGGGCSEEEEECC
T ss_pred HhCCCCE---EEEECCchhcC-------CHH---HHHHcCCeEEEeCCHHHHhcCCCEEEeCCc
Confidence 345 765 99998888732 121 12211 23689999999999987765
No 447
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=65.51 E-value=3.6 Score=47.13 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=29.4
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+.+|||+|||.||+.+|..|.+.|++ +.++|+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~ 139 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERG 139 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCC---CEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe---EEEEEcc
Confidence 46899999999999999999999976 8888874
No 448
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=65.45 E-value=19 Score=38.00 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=33.5
Q ss_pred HHHHHhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 181 ILNGLKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 181 ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.+.+++..+ --...+|+|+|||..|...+.+++..|.. ++.+|+
T Consensus 165 a~~~l~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~---Vi~~~~ 208 (348)
T 3two_A 165 TYSPLKFSK-VTKGTKVGVAGFGGLGSMAVKYAVAMGAE---VSVFAR 208 (348)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCSHHHHHHHHHHHHTTCE---EEEECS
T ss_pred HHHHHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHCCCe---EEEEeC
Confidence 355666552 33567999999999999999999889974 887775
No 449
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=65.19 E-value=4.1 Score=45.58 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=30.4
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
...+|||+|||.||+.+|..|.+.+.. .+|.|+|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g-~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPG-ARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTT-CEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCC-CeEEEEeCCCC
Confidence 456899999999999999999887422 25999998743
No 450
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=65.19 E-value=5 Score=41.69 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=28.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.||.|+|+|..|.++|..|.+.|. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECC
Confidence 589999999999999999999996 49999974
No 451
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=65.14 E-value=4.4 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
+..|+|+|||.||+.+|-.+.+.|++ +.|+++.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~ 59 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLN 59 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEec
Confidence 46899999999999999999999976 8899875
No 452
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=65.07 E-value=4.9 Score=46.07 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+..|+|+|||.+|+.+|-.|.+.|++ +.++|+.--
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~ 83 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVE 83 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCC
Confidence 45899999999999999999999987 999998643
No 453
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=65.02 E-value=3.7 Score=45.79 Aligned_cols=37 Identities=30% Similarity=0.356 Sum_probs=30.4
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|||+|||.||+.+|..|.+.|-...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 4689999999999999999998872123599999864
No 454
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=64.94 E-value=5.5 Score=45.57 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=29.5
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.+.+|+|+|+|.||+..|..+.+.|.+ +.++|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~---v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAK---TAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCe---EEEEec
Confidence 456899999999999999999999965 899996
No 455
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=64.88 E-value=8.5 Score=42.75 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=29.1
Q ss_pred HhHhCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 185 LKLVKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 185 l~~~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+..++...-.||.|+|+|..|..+|..|.+ |. +++++|.+
T Consensus 27 ~~~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~---~V~~~D~~ 67 (432)
T 3pid_A 27 GQQMGRGSEFMKITISGTGYVGLSNGVLIAQ-NH---EVVALDIV 67 (432)
T ss_dssp --------CCCEEEEECCSHHHHHHHHHHHT-TS---EEEEECSC
T ss_pred CcccccccCCCEEEEECcCHHHHHHHHHHHc-CC---eEEEEecC
Confidence 3556677777899999999999999999887 84 48999974
No 456
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=64.84 E-value=5.4 Score=43.25 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=29.3
Q ss_pred CceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~ 229 (766)
+.+|+|+|||.+|+.+|..|.+. |.+ +.++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~---v~v~E~~ 40 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKR---VLVLERR 40 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCC---EEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCC---EEEEeCC
Confidence 56899999999999999999998 865 8888876
No 457
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=64.76 E-value=4.3 Score=46.11 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=27.1
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++++.+++|.|||.+|-+++..|.+.|.+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~~---V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGAK---VVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC----CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCCE---EEEEECC
Confidence 57788999999999999999999999963 8888773
No 458
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=64.64 E-value=3.5 Score=43.08 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=32.2
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++++.+|||+|+|..|..-+++|.+.|.. +.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCC
Confidence 47889999999999999999999999965 8899874
No 459
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=64.59 E-value=4.4 Score=44.39 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=29.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+|+|+|||.+|+.+|..|.+.|.. -++.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~-~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCP-PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSC-CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCC-CcEEEEeCCC
Confidence 4899999999999999999999862 1599998853
No 460
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=64.58 E-value=9.4 Score=40.24 Aligned_cols=47 Identities=13% Similarity=0.191 Sum_probs=34.2
Q ss_pred HHHHHHhH-hCCcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 180 AILNGLKL-VKKKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 180 ~ll~al~~-~~~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..+.+++. .+..-...+++|.|||..|...+.+++..|-. +++.+|+
T Consensus 157 ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~--~Vi~~~~ 204 (345)
T 3jv7_A 157 TPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA--RVIAVDL 204 (345)
T ss_dssp HHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCC--EEEEEES
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcC
Confidence 34556655 23334577999999999998888888888644 6888776
No 461
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=64.56 E-value=5.4 Score=43.69 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=54.6
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---------c---cCCCCHHHHhcc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---------D---TTARTLSDIIPN 262 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---------~---~~~~~L~e~i~~ 262 (766)
.||+|+|||..|..+++.|.+.|--..+++++|++- +.+......+.. . .+..++.++++.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~-------~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTL-------SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCH-------HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCH-------HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 389999999999999999998772113688888741 112222222211 0 122467888887
Q ss_pred --CcEEEecCCCCCCCHHHHHhhc--cCcEEEeccC
Q psy14495 263 --ADIFLGLSVSGVLKKEMVLQMA--KNPIILALAN 294 (766)
Q Consensus 263 --~~vliG~S~~g~ft~evv~~M~--~~PiIfaLsN 294 (766)
+|++|=+..+. +..++++... ...+ +-+|+
T Consensus 75 ~~~DvVin~ag~~-~~~~v~~a~l~~g~~v-vD~a~ 108 (405)
T 4ina_A 75 VKPQIVLNIALPY-QDLTIMEACLRTGVPY-LDTAN 108 (405)
T ss_dssp HCCSEEEECSCGG-GHHHHHHHHHHHTCCE-EESSC
T ss_pred hCCCEEEECCCcc-cChHHHHHHHHhCCCE-EEecC
Confidence 89999765532 3445555443 3443 33555
No 462
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=64.49 E-value=4.6 Score=49.68 Aligned_cols=34 Identities=26% Similarity=0.647 Sum_probs=31.0
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|+|.||+.+|..|.+.|.. ++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCC
Confidence 56899999999999999999999974 69999986
No 463
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=64.47 E-value=5.4 Score=44.04 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=31.4
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
.+.+|+|+|||-+|+.+|..|.+.|.+ +.++|++.-
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~---V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKK---VLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCC
Confidence 346899999999999999999999976 999998743
No 464
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=64.29 E-value=3.9 Score=42.97 Aligned_cols=35 Identities=26% Similarity=0.115 Sum_probs=28.8
Q ss_pred eEEEECcchhhHHHHHHHHHcCCC---CccEEEEcCCc
Q psy14495 196 KLVVSGAGAAALACLDLIIDLGFP---LQNIFVTDLAG 230 (766)
Q Consensus 196 ~iv~~GaG~ag~gia~~l~~~g~~---~~~i~~~D~~G 230 (766)
.|+|+|||.+|+.+|-.|.+.|.+ ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 689999999999999999998821 12599999863
No 465
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=64.18 E-value=4.4 Score=47.37 Aligned_cols=33 Identities=9% Similarity=0.041 Sum_probs=29.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..|+|+|||.||+.+|..|.+.|.+ +.|+|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAV---VTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCC---EEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 5799999999999999999999975 99999853
No 466
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=63.84 E-value=3.9 Score=50.23 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=35.4
Q ss_pred CcCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 190 KKMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 190 ~~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
++|+..||+++|+|..|.-+|..|...|+. +|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~aGVg--~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLAGVK--SMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHHCCS--EEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHcCCC--eEEEecCC
Confidence 358899999999999999999999999998 89999987
No 467
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=63.75 E-value=3.5 Score=44.86 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=29.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCC---CCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGF---PLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~---~~~~i~~~D~~ 229 (766)
.+|+|+|||.+|+.+|..|.+.|. +..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC
Confidence 589999999999999999999983 11369999986
No 468
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=63.58 E-value=4.7 Score=45.09 Aligned_cols=32 Identities=9% Similarity=0.169 Sum_probs=29.1
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..|+|+|+|+||+..|..+.+.|.+ +.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~---V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDK---VVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSC---EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCC
Confidence 5899999999999999999999975 9999985
No 469
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=63.51 E-value=5.7 Score=45.23 Aligned_cols=39 Identities=21% Similarity=0.312 Sum_probs=32.9
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
+..+..|||+|+|.||+..|-.+.+.|.+ +.++++...+
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~~ 161 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPVI 161 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 44567899999999999999999999976 9999887543
No 470
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=63.09 E-value=6.2 Score=44.03 Aligned_cols=31 Identities=29% Similarity=0.199 Sum_probs=28.4
Q ss_pred CceEEEECcchhhHHHHHHHHH-cCCCCccEEEEc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID-LGFPLQNIFVTD 227 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D 227 (766)
+.+|+|+|+|.||+.+|..+.+ .|.+ +.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKR---VAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCE---EEEEe
Confidence 4689999999999999999999 8975 99999
No 471
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=62.97 E-value=5.4 Score=44.37 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=29.7
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
..+|+|+|+|.||+..|..|.+.|- .-++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCC
Confidence 3589999999999999999999882 2369999986
No 472
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=62.94 E-value=9.3 Score=40.52 Aligned_cols=55 Identities=24% Similarity=0.165 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHhHhCCcCCC--ceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 172 GTAIIVGSAILNGLKLVKKKMKD--CKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 172 GTa~v~lA~ll~al~~~~~~l~d--~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
++-...++..+.++....+--.. .+++|.|| |..|..++.++...|.+ +++.+|+
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~--~Vi~~~~ 194 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCS--RVVGICG 194 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCS--EEEEEES
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCC--eEEEEeC
Confidence 33334555566667333333345 79999998 99999999999999975 6888887
No 473
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=62.68 E-value=5.3 Score=46.69 Aligned_cols=46 Identities=20% Similarity=0.476 Sum_probs=34.8
Q ss_pred CceEEEECcchhhHHHHHHHHH-----cCCCCccEEEEcCCc-cccCCCCCCCcH
Q psy14495 194 DCKLVVSGAGAAALACLDLIID-----LGFPLQNIFVTDLAG-VLYKGRSELMDS 242 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~-----~g~~~~~i~~~D~~G-lv~~~r~~~l~~ 242 (766)
+..|+|+|||.+|+..|-.|.+ .|++ +.++|+.. ....+|...+++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~~~~~~~gra~~l~~ 59 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKRSTKVYNGQADGLQC 59 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSSSSCCCSCSCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCCCCCCCCCceeEECh
Confidence 4579999999999999999999 9987 99999763 223344333443
No 474
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=62.62 E-value=15 Score=38.85 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=52.4
Q ss_pred HHHhHhCCcCCCceEEEE-CcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---ccCCCCHHH
Q psy14495 183 NGLKLVKKKMKDCKLVVS-GAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---DTTARTLSD 258 (766)
Q Consensus 183 ~al~~~~~~l~d~~iv~~-GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---~~~~~~L~e 258 (766)
.+++..+ ...+++++|. |+|..|..++.++...|.+ ++.+|+. . +.+...++.=|. +....++.+
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~---Vi~~~~~----~---~~~~~~~~~Ga~~~~~~~~~~~~~ 223 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFR---PIVTVRR----D---EQIALLKDIGAAHVLNEKAPDFEA 223 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESC----G---GGHHHHHHHTCSEEEETTSTTHHH
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCC----H---HHHHHHHHcCCCEEEECCcHHHHH
Confidence 4555555 4455677776 8899999999999999974 8887752 1 122222221121 122345555
Q ss_pred Hhc------cCcEEEecCCCCCCCHHHHHhhcc
Q psy14495 259 IIP------NADIFLGLSVSGVLKKEMVLQMAK 285 (766)
Q Consensus 259 ~i~------~~~vliG~S~~g~ft~evv~~M~~ 285 (766)
.++ ++|++|=+++...+ ++.++.|++
T Consensus 224 ~v~~~~~~~g~D~vid~~g~~~~-~~~~~~l~~ 255 (349)
T 3pi7_A 224 TLREVMKAEQPRIFLDAVTGPLA-SAIFNAMPK 255 (349)
T ss_dssp HHHHHHHHHCCCEEEESSCHHHH-HHHHHHSCT
T ss_pred HHHHHhcCCCCcEEEECCCChhH-HHHHhhhcC
Confidence 553 47888877652222 445554443
No 475
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.46 E-value=4.9 Score=46.84 Aligned_cols=34 Identities=29% Similarity=0.268 Sum_probs=30.1
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|||+|+|.||+..|..|.+.|.+ +.|+|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~---V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQ---VTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 46899999999999999999998864 99999864
No 476
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=62.39 E-value=5.8 Score=43.89 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=29.9
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|+|+|||.+|+..|..|.+.|.+ +.++++..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCC
Confidence 46899999999999999999999965 88888863
No 477
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=62.24 E-value=4.6 Score=44.56 Aligned_cols=36 Identities=25% Similarity=0.439 Sum_probs=31.6
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++.+||+|+|.|.+|++.|+.|.+.|.. +...|++-
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~ 38 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRM 38 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSS
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCC
Confidence 5678999999999999999999999976 88889853
No 478
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=62.15 E-value=5 Score=46.73 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=29.7
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..|+|+|||.||+.+|..|.+.|.+ +.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQ---VTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 5899999999999999999999975 99999853
No 479
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=62.14 E-value=5.7 Score=42.62 Aligned_cols=32 Identities=16% Similarity=0.363 Sum_probs=28.5
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+++|+|||.+|+.+|..|.+.|.+ +.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK---VLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEecC
Confidence 4799999999999999999998865 8888885
No 480
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=62.12 E-value=6.7 Score=44.14 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=30.2
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLA 229 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~ 229 (766)
.+..|+|+|+|.||+..|..+.+.|.+ +.++|++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~---V~liEk~ 64 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKK---VMVLDFV 64 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecc
Confidence 356899999999999999999999975 9999973
No 481
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=61.98 E-value=3.7 Score=49.06 Aligned_cols=36 Identities=33% Similarity=0.523 Sum_probs=33.6
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
++.||+|+|+|.-|.-++..|...|+. +|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg--~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFR--QIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCC--EEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCC--cEEEECCCe
Confidence 788999999999999999999999997 899999873
No 482
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=61.98 E-value=73 Score=34.49 Aligned_cols=111 Identities=14% Similarity=0.047 Sum_probs=69.5
Q ss_pred chHHHHHHHhhcCCCcEEe---cCCchhHHHHHHHHHHHHhHhCCcCCCceEEEECcchhhHHHHHHH----HHcCCCCc
Q psy14495 149 ECFYIEKKLRNHMKIPVFH---DDQHGTAIIVGSAILNGLKLVKKKMKDCKLVVSGAGAAALACLDLI----IDLGFPLQ 221 (766)
Q Consensus 149 ~af~il~~~~~~~~~~~fn---DD~qGTa~v~lA~ll~al~~~~~~l~d~~iv~~GaG~ag~gia~~l----~~~g~~~~ 221 (766)
.+.+.|.+|- ++||+| |..|=| =+||=++.-....| +++..||+++|-+.-+ +++.+ ...|+.
T Consensus 138 ~~~~~lA~~s---~vPVINa~~~~~HPt--QaLaDl~Ti~E~~G-~l~glkva~vGD~~nn--va~Sl~~~~~~lG~~-- 207 (365)
T 4amu_A 138 SDVDALVKYS---GVPVWNGLTDDEHPT--QIIADFMTMKEKFG-NLKNKKIVFIGDYKNN--VGVSTMIGAAFNGMH-- 207 (365)
T ss_dssp HHHHHHHHHH---CSCEEEEECSSCCHH--HHHHHHHHHHHHHS-SCTTCEEEEESSTTSH--HHHHHHHHHHHTTCE--
T ss_pred hHHHHHHHhC---CCCEEeCCCCCCCcH--HHHHHHHHHHHHhC-CCCCCEEEEECCCCcc--hHHHHHHHHHHcCCE--
Confidence 3445555665 599998 555544 45666665555555 4999999999998534 44443 356875
Q ss_pred cEEEEcCCccccCCCCCCCcHHHHHhcccc-----CCCCHHHHhccCcEEEecCC
Q psy14495 222 NIFVTDLAGVLYKGRSELMDSNKARFIKDT-----TARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 222 ~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~-----~~~~L~e~i~~~~vliG~S~ 271 (766)
+.++=.+|+.-... +.+-..-+.+++.. ...++.|+++++||+.--.+
T Consensus 208 -v~~~~P~~~~p~~~-~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W 260 (365)
T 4amu_A 208 -VVMCGPDNYKNEID-KNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVW 260 (365)
T ss_dssp -EEEESCGGGGGGSC-HHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCS
T ss_pred -EEEECCccccCCCc-HHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEeccc
Confidence 99998888753101 11111112333322 23689999999999986443
No 483
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=61.89 E-value=12 Score=38.32 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=47.8
Q ss_pred ceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCCCCC
Q psy14495 195 CKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSVSGV 274 (766)
Q Consensus 195 ~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~~g~ 274 (766)
.||+++|+|..|-.+++.+.+.+- +=++.+|+++- . + + .-+-..+|.+++ .+||+|=+|.|..
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~--eLva~~d~~~~----~-----~----~-gv~v~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH--EIVGVIENTPK----A-----T----T-PYQQYQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEECSSCC---------------C-CSCBCSCTTTCT-TCSEEEECSCHHH
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC--EEEEEEecCcc----c-----c----C-CCceeCCHHHHh-CCCEEEEeCChHH
Confidence 589999999999999999988652 34566787542 0 0 0 001124566666 7898887776543
Q ss_pred CCHHHHHhhc-cCcEEE
Q psy14495 275 LKKEMVLQMA-KNPIIL 290 (766)
Q Consensus 275 ft~evv~~M~-~~PiIf 290 (766)
.. +.++ .. ..|+|.
T Consensus 67 ~~-~~~~-l~~g~~vVi 81 (243)
T 3qy9_A 67 LF-PLLD-EDFHLPLVV 81 (243)
T ss_dssp HH-HHHT-SCCCCCEEE
T ss_pred HH-HHHH-HhcCCceEe
Confidence 32 3444 32 356654
No 484
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=61.41 E-value=6.4 Score=44.96 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=31.1
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
.+--|+|+|+|.+|+++|..|.+.|++ +.|+++..
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~---V~LlEk~d 51 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQ---TGLVEMND 51 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCc---EEEEECCC
Confidence 356899999999999999999999987 99999863
No 485
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=61.34 E-value=4.8 Score=46.69 Aligned_cols=34 Identities=12% Similarity=0.249 Sum_probs=30.4
Q ss_pred CceEEEECcchhhHHHHHHHHH-cCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIID-LGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~-~g~~~~~i~~~D~~G 230 (766)
+..|+|+|||.+|+..|-.|.+ .|++ +.++|+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~ 66 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKE 66 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 4689999999999999999999 8986 89999764
No 486
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=61.34 E-value=12 Score=39.27 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhHhCCcCCCceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 175 IIVGSAILNGLKLVKKKMKDCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 175 ~v~lA~ll~al~~~~~~l~d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
...++..+.+++....--...+++|.|| |..|..+++++...|. +++.+|+
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~ 178 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVS 178 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEES
T ss_pred hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeC
Confidence 3445555666654344345689999996 9999999999999996 4888877
No 487
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=61.13 E-value=3.8 Score=43.26 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=60.1
Q ss_pred ceEEEECc-chhhHHHHHHHHHcCCC----CccEEEEcCCcc---ccCCCCCCCcHHHHHhccc-cCCCCHHHHhccCcE
Q psy14495 195 CKLVVSGA-GAAALACLDLIIDLGFP----LQNIFVTDLAGV---LYKGRSELMDSNKARFIKD-TTARTLSDIIPNADI 265 (766)
Q Consensus 195 ~~iv~~Ga-G~ag~gia~~l~~~g~~----~~~i~~~D~~Gl---v~~~r~~~l~~~k~~~a~~-~~~~~L~e~i~~~~v 265 (766)
.||+|.|| |..|..++..|.+.|.- ...++++|...- ..... .++.+...+|..+ ....++.++++++|+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~-~dl~~~~~~~~~di~~~~~~~~a~~~~D~ 83 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVV-MELEDCAFPLLAGLEATDDPKVAFKDADY 83 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchh-hhhhcccccccCCeEeccChHHHhCCCCE
Confidence 58999997 99999999999887751 237999997420 00000 0011000012111 223578999999998
Q ss_pred EEecCC----CC-----------CCCHHHHHhhcc----CcEEEeccCCC
Q psy14495 266 FLGLSV----SG-----------VLKKEMVLQMAK----NPIILALANPL 296 (766)
Q Consensus 266 liG~S~----~g-----------~ft~evv~~M~~----~PiIfaLsNPt 296 (766)
+|=+.+ +| ..|.++++.+.+ +.+++-.|||.
T Consensus 84 Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 84 ALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 775543 22 134455566653 23778889885
No 488
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=61.08 E-value=6.1 Score=43.59 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=27.9
Q ss_pred CceEEEECcchhhHHHHHHHHHc-CCCCccEEEEcCC
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDL-GFPLQNIFVTDLA 229 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~-g~~~~~i~~~D~~ 229 (766)
+..|+|+|||-+|+.+|..|.++ |.+ +.++++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~---V~VlE~~ 43 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPS---WMIVDSN 43 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSC---EEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCC---EEEEECC
Confidence 45799999999999999999874 765 8888876
No 489
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=60.97 E-value=16 Score=37.07 Aligned_cols=72 Identities=8% Similarity=0.123 Sum_probs=52.2
Q ss_pred CCCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhccccCCCCHHHHhccCcEEEecCC
Q psy14495 192 MKDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIKDTTARTLSDIIPNADIFLGLSV 271 (766)
Q Consensus 192 l~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~L~e~i~~~~vliG~S~ 271 (766)
....||.|+|+|..|..+|..|.+.|.. ++.+|+. +.++.+| +|-+..
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~---V~~~~~~----------------------------~~~~~aD-ilavP~ 51 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHY---VTVLHAP----------------------------EDIRDFE-LVVIDA 51 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCE---EEECSSG----------------------------GGGGGCS-EEEECS
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCE---EEEecCH----------------------------HHhccCC-EEEEcH
Confidence 3456999999999999999999999964 8877771 1256678 777665
Q ss_pred CCCCCHHHHHhhc----cCcEEEeccCCCC
Q psy14495 272 SGVLKKEMVLQMA----KNPIILALANPLP 297 (766)
Q Consensus 272 ~g~ft~evv~~M~----~~PiIfaLsNPt~ 297 (766)
. -.+++++.+. +..||.-.|-.++
T Consensus 52 ~--ai~~vl~~l~~~l~~g~ivvd~sgs~~ 79 (232)
T 3dfu_A 52 H--GVEGYVEKLSAFARRGQMFLHTSLTHG 79 (232)
T ss_dssp S--CHHHHHHHHHTTCCTTCEEEECCSSCC
T ss_pred H--HHHHHHHHHHHhcCCCCEEEEECCcCH
Confidence 3 4467777665 4567777765554
No 490
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=60.54 E-value=98 Score=33.28 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=65.1
Q ss_pred hHHHHHHHhhcCCCcEEe--cCCchhHHHHHHHHHHHHhHhCC------------cCCCceEEEECcchhhHHHHHHH--
Q psy14495 150 CFYIEKKLRNHMKIPVFH--DDQHGTAIIVGSAILNGLKLVKK------------KMKDCKLVVSGAGAAALACLDLI-- 213 (766)
Q Consensus 150 af~il~~~~~~~~~~~fn--DD~qGTa~v~lA~ll~al~~~~~------------~l~d~~iv~~GaG~ag~gia~~l-- 213 (766)
+.+.+.+|- ++||.| || +-.-.=+|+=++.-....|. .|+..||+++|=+. . +++.+
T Consensus 134 ~~~~lA~~s---~vPVINag~d-~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~-n--va~Sl~~ 206 (353)
T 3sds_A 134 DIANLAKHS---SVPVINALCD-TFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDAN-N--VLFDLAI 206 (353)
T ss_dssp HHHHHHHHC---SSCEEEEECS-SCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCC-H--HHHHHHH
T ss_pred HHHHHHhhC---CCCEEECCCC-CCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCc-h--HHHHHHH
Confidence 344455554 599999 33 23444566666665666554 25899999999984 3 55444
Q ss_pred --HHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc--c-----cCCCCHHHHhccCcEEEecC
Q psy14495 214 --IDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK--D-----TTARTLSDIIPNADIFLGLS 270 (766)
Q Consensus 214 --~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~--~-----~~~~~L~e~i~~~~vliG~S 270 (766)
...|+. |+++=.+|+--. +.+-..-+.+|+ . ....++.|+++++||+.-..
T Consensus 207 ~l~~lG~~---v~~~~P~~~~~~---~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~ 266 (353)
T 3sds_A 207 AATKMGVN---VAVATPRGYEIP---SHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDT 266 (353)
T ss_dssp HHHHTTCE---EEEECCTTCCCC---HHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECC
T ss_pred HHHHcCCE---EEEECCcccCCC---HHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCC
Confidence 356875 888888876211 111111112222 1 12368999999999998643
No 491
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=60.30 E-value=10 Score=39.67 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=52.6
Q ss_pred cCCCceEEEECc-chhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHH----hc----c--c---cCCCCH
Q psy14495 191 KMKDCKLVVSGA-GAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKAR----FI----K--D---TTARTL 256 (766)
Q Consensus 191 ~l~d~~iv~~Ga-G~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~----~a----~--~---~~~~~L 256 (766)
+++..+|+|.|| |--|-.+++.|.+.|. +++.++++. .-++.|.. +. + . .+..+|
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~--------~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPG--------PRSPSKAKIFKALEDKGAIIVYGLINEQEAM 75 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSS--------CCCHHHHHHHHHHHHTTCEEEECCTTCHHHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCC--------CCChhHHHHHHHHHhCCcEEEEeecCCHHHH
Confidence 345579999999 9999999999999984 588887742 01122211 11 1 1 123468
Q ss_pred HHHhc--cCcEEEecCCC--CCCCHHHHHhhc
Q psy14495 257 SDIIP--NADIFLGLSVS--GVLKKEMVLQMA 284 (766)
Q Consensus 257 ~e~i~--~~~vliG~S~~--g~ft~evv~~M~ 284 (766)
.++++ ++|++|=+.+. -..+..+++.+.
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~ 107 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGESILDQIALVKAMK 107 (346)
T ss_dssp HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHH
T ss_pred HHHHhhCCCCEEEECCchhhHHHHHHHHHHHH
Confidence 88898 89999877652 134566777665
No 492
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=60.23 E-value=6.2 Score=44.90 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCccc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGVL 232 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Glv 232 (766)
.+..|||+|+|.||+..|-.+.+.|.+ +.++++...+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 456899999999999999999999975 9999987543
No 493
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=60.08 E-value=6.9 Score=46.76 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=31.6
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCcc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAGV 231 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~Gl 231 (766)
+.+|+|+|||.+|+.+|..|.+.|.. ++.++|+..+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~--~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWN--NITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC--cEEEEeCCCC
Confidence 46899999999999999999999973 5999998754
No 494
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=60.07 E-value=7.6 Score=43.07 Aligned_cols=33 Identities=33% Similarity=0.489 Sum_probs=29.4
Q ss_pred CCceEEEECcchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
.+..|+|+|+|.||+..|..+.+.|.+ +.++|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGAR---VACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCE---EEEEEe
Confidence 456899999999999999999999975 999984
No 495
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=60.06 E-value=4.9 Score=49.43 Aligned_cols=40 Identities=30% Similarity=0.325 Sum_probs=34.3
Q ss_pred cCCCceEEEECcchhhHHHHHHHHHcCCC---CccEEEEcCCc
Q psy14495 191 KMKDCKLVVSGAGAAALACLDLIIDLGFP---LQNIFVTDLAG 230 (766)
Q Consensus 191 ~l~d~~iv~~GaG~ag~gia~~l~~~g~~---~~~i~~~D~~G 230 (766)
+|++.||+++|||.-|.-++..|...|+. ..+|.++|.+=
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDS 464 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCB
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCE
Confidence 35678999999999999999999999982 24899999873
No 496
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=60.02 E-value=28 Score=36.28 Aligned_cols=37 Identities=14% Similarity=0.040 Sum_probs=29.6
Q ss_pred CCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcC
Q psy14495 189 KKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDL 228 (766)
Q Consensus 189 ~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~ 228 (766)
..--..++|+|.| +|..|..++.++...|.+ ++.+|+
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~ 173 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAK---LIGTVS 173 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEES
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeC
Confidence 3334568999999 799999999999999974 787775
No 497
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=59.98 E-value=6.4 Score=42.05 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCceEEEECcchhhHHHHHHHHHc--CCCCccEEEEcCCc
Q psy14495 193 KDCKLVVSGAGAAALACLDLIIDL--GFPLQNIFVTDLAG 230 (766)
Q Consensus 193 ~d~~iv~~GaG~ag~gia~~l~~~--g~~~~~i~~~D~~G 230 (766)
.+.+|+|+|+|.||+.+|..|.+. |.+ +.++|+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCc
Confidence 456899999999999999999988 765 99998864
No 498
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=59.81 E-value=16 Score=38.02 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=49.3
Q ss_pred HHHHHHhHhCCcCCCceEEEEC-cchhhHHHHHHHHHcCCCCccEEEEcCCccccCCCCCCCcHHHHHhcc---ccCCCC
Q psy14495 180 AILNGLKLVKKKMKDCKLVVSG-AGAAALACLDLIIDLGFPLQNIFVTDLAGVLYKGRSELMDSNKARFIK---DTTART 255 (766)
Q Consensus 180 ~ll~al~~~~~~l~d~~iv~~G-aG~ag~gia~~l~~~g~~~~~i~~~D~~Glv~~~r~~~l~~~k~~~a~---~~~~~~ 255 (766)
..+.+++.. +--..++|+|+| +|..|..++.++...|.+ ++.+++. +++...++.=|. +....+
T Consensus 140 ta~~al~~~-~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~---vi~~~~~--------~~~~~~~~lGa~~~i~~~~~~ 207 (321)
T 3tqh_A 140 TALQALNQA-EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT---VITTASK--------RNHAFLKALGAEQCINYHEED 207 (321)
T ss_dssp HHHHHHHHT-TCCTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEECH--------HHHHHHHHHTCSEEEETTTSC
T ss_pred HHHHHHHhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE---EEEEecc--------chHHHHHHcCCCEEEeCCCcc
Confidence 455666443 334567899997 899999999999999974 6655441 112222221121 122334
Q ss_pred -HHHHhccCcEEEecCC
Q psy14495 256 -LSDIIPNADIFLGLSV 271 (766)
Q Consensus 256 -L~e~i~~~~vliG~S~ 271 (766)
+.+.++++|++|=+++
T Consensus 208 ~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 208 FLLAISTPVDAVIDLVG 224 (321)
T ss_dssp HHHHCCSCEEEEEESSC
T ss_pred hhhhhccCCCEEEECCC
Confidence 7777777888887665
No 499
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=59.63 E-value=6 Score=43.76 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=29.8
Q ss_pred CceEEEECcchhhHHHHHHHHHcCCCCccEEEEcCCc
Q psy14495 194 DCKLVVSGAGAAALACLDLIIDLGFPLQNIFVTDLAG 230 (766)
Q Consensus 194 d~~iv~~GaG~ag~gia~~l~~~g~~~~~i~~~D~~G 230 (766)
..+|+|+|||.+|+.+|..|.+.|.+ +.++++..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~ 46 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLN---VTVFEAEG 46 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCE---EEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEeCC
Confidence 46899999999999999999999864 88888863
No 500
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=59.63 E-value=18 Score=38.70 Aligned_cols=89 Identities=19% Similarity=0.275 Sum_probs=57.2
Q ss_pred HHHHHHHHhHhCCcCCCceEEEECcchhhH-HHHHHHHHcCCCC-------ccEEEEcCCccccCCCCCCCcHHHHHhcc
Q psy14495 178 GSAILNGLKLVKKKMKDCKLVVSGAGAAAL-ACLDLIIDLGFPL-------QNIFVTDLAGVLYKGRSELMDSNKARFIK 249 (766)
Q Consensus 178 lA~ll~al~~~~~~l~d~~iv~~GaG~ag~-gia~~l~~~g~~~-------~~i~~~D~~Glv~~~r~~~l~~~k~~~a~ 249 (766)
..-++.|++...+...+.+++|+|-|.--. .+.+++.+.|+.. .++++.|.
T Consensus 209 ~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~--------------------- 267 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDR--------------------- 267 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCS---------------------
T ss_pred HHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECC---------------------
Confidence 345677776665556688999999987643 5667777788761 13333332
Q ss_pred ccCCCCHHHHhccCcE-EEecCCCCCCCHHHHHhhc-cCcEEE
Q psy14495 250 DTTARTLSDIIPNADI-FLGLSVSGVLKKEMVLQMA-KNPIIL 290 (766)
Q Consensus 250 ~~~~~~L~e~i~~~~v-liG~S~~g~ft~evv~~M~-~~PiIf 290 (766)
..++.+.+..+|+ +++-|..+.|-.-++++|+ ..|+|.
T Consensus 268 ---~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~ 307 (374)
T 2xci_A 268 ---FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIY 307 (374)
T ss_dssp ---SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEE
T ss_pred ---HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEE
Confidence 1236677788998 5655532223234889998 789985
Done!