Query psy14496
Match_columns 561
No_of_seqs 358 out of 3604
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 21:16:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 1.1E-89 3.8E-94 740.1 48.7 544 16-561 29-584 (584)
2 3oz2_A Digeranylgeranylglycero 100.0 3.7E-36 1.3E-40 310.1 31.9 331 21-391 3-337 (397)
3 3cgv_A Geranylgeranyl reductas 100.0 1.8E-32 6.3E-37 282.7 31.5 343 21-405 3-350 (397)
4 3atr_A Conserved archaeal prot 100.0 1.4E-31 4.9E-36 280.6 29.4 344 21-405 5-355 (453)
5 3rp8_A Flavoprotein monooxygen 100.0 2.3E-30 7.7E-35 268.0 23.7 343 18-405 19-370 (407)
6 3e1t_A Halogenase; flavoprotei 100.0 4.5E-30 1.5E-34 273.1 24.9 336 20-390 5-355 (512)
7 2qa1_A PGAE, polyketide oxygen 100.0 1E-28 3.6E-33 261.0 32.8 339 19-405 8-349 (500)
8 2qa2_A CABE, polyketide oxygen 100.0 9.8E-29 3.4E-33 261.2 32.4 338 20-405 10-350 (499)
9 3nix_A Flavoprotein/dehydrogen 100.0 2.2E-29 7.4E-34 261.9 24.8 329 20-388 3-343 (421)
10 3fmw_A Oxygenase; mithramycin, 100.0 5.3E-29 1.8E-33 266.6 28.0 338 20-405 47-394 (570)
11 3i3l_A Alkylhalidase CMLS; fla 100.0 2.1E-29 7.3E-34 270.1 22.4 336 19-390 20-367 (591)
12 1pn0_A Phenol 2-monooxygenase; 100.0 1.3E-28 4.4E-33 268.4 28.4 357 21-405 7-423 (665)
13 4hb9_A Similarities with proba 100.0 2E-29 6.8E-34 261.1 20.3 329 23-389 2-369 (412)
14 3ihg_A RDME; flavoenzyme, anth 100.0 1.1E-28 3.6E-33 264.3 24.5 329 20-389 3-358 (535)
15 1k0i_A P-hydroxybenzoate hydro 100.0 1.6E-28 5.4E-33 253.0 22.0 336 21-400 1-345 (394)
16 2dkh_A 3-hydroxybenzoate hydro 100.0 1.1E-27 3.6E-32 260.9 29.4 349 21-405 31-414 (639)
17 2x3n_A Probable FAD-dependent 100.0 1.4E-28 4.6E-33 254.0 19.6 338 21-405 5-359 (399)
18 3alj_A 2-methyl-3-hydroxypyrid 100.0 3E-28 1E-32 249.6 19.8 317 21-389 10-335 (379)
19 3c96_A Flavin-containing monoo 100.0 2.6E-27 8.9E-32 245.1 26.2 329 21-389 3-357 (410)
20 2vou_A 2,6-dihydroxypyridine h 100.0 7.4E-27 2.5E-31 240.7 25.3 322 20-400 3-363 (397)
21 2r0c_A REBC; flavin adenine di 100.0 3.6E-26 1.2E-30 244.7 30.4 337 21-405 25-381 (549)
22 2xdo_A TETX2 protein; tetracyc 99.9 1.6E-25 5.5E-30 230.7 21.8 318 21-389 25-370 (398)
23 3c4a_A Probable tryptophan hyd 99.9 7.3E-26 2.5E-30 231.8 16.1 319 23-405 1-331 (381)
24 2weu_A Tryptophan 5-halogenase 99.9 3.1E-24 1E-28 228.5 24.5 223 124-389 166-392 (511)
25 2aqj_A Tryptophan halogenase, 99.9 5.8E-24 2E-28 227.5 24.8 217 124-389 158-384 (538)
26 2pyx_A Tryptophan halogenase; 99.9 3.3E-24 1.1E-28 228.6 18.7 226 125-390 169-401 (526)
27 2e4g_A Tryptophan halogenase; 99.9 2.1E-23 7.2E-28 223.4 21.5 220 125-389 188-415 (550)
28 3ihm_A Styrene monooxygenase A 99.9 3E-22 1E-26 208.1 15.9 307 19-387 19-360 (430)
29 2bry_A NEDD9 interacting prote 99.7 3.1E-16 1.1E-20 165.4 20.7 145 19-208 89-234 (497)
30 1ryi_A Glycine oxidase; flavop 99.7 1.3E-15 4.5E-20 155.6 22.5 297 16-367 11-360 (382)
31 2gag_B Heterotetrameric sarcos 99.7 1.2E-14 4.2E-19 149.5 28.2 200 125-368 168-374 (405)
32 1y56_B Sarcosine oxidase; dehy 99.7 1.9E-14 6.5E-19 147.0 26.7 64 125-205 143-206 (382)
33 3nyc_A D-arginine dehydrogenas 99.6 3E-14 1E-18 145.3 23.6 171 19-217 6-219 (381)
34 1yvv_A Amine oxidase, flavin-c 99.6 1.6E-14 5.5E-19 144.7 21.0 41 21-67 1-41 (336)
35 3ps9_A TRNA 5-methylaminomethy 99.6 4.7E-14 1.6E-18 154.8 22.3 161 22-205 272-474 (676)
36 2gf3_A MSOX, monomeric sarcosi 99.6 3.4E-13 1.2E-17 137.9 27.1 63 125-205 144-206 (389)
37 3dme_A Conserved exported prot 99.6 1.4E-13 4.7E-18 139.6 23.9 77 124-217 143-220 (369)
38 3pvc_A TRNA 5-methylaminomethy 99.6 6.3E-14 2.2E-18 153.9 22.4 162 21-205 263-470 (689)
39 2oln_A NIKD protein; flavoprot 99.5 8.2E-13 2.8E-17 135.5 22.3 72 124-216 146-217 (397)
40 2i0z_A NAD(FAD)-utilizing dehy 99.5 9.7E-14 3.3E-18 144.6 14.5 156 18-204 22-191 (447)
41 3axb_A Putative oxidoreductase 99.5 1.9E-12 6.6E-17 135.0 20.8 74 125-217 175-264 (448)
42 3jsk_A Cypbp37 protein; octame 99.5 3.2E-13 1.1E-17 133.0 13.5 162 21-213 78-260 (344)
43 3da1_A Glycerol-3-phosphate de 99.5 1.1E-11 3.6E-16 132.6 24.9 219 126-371 165-393 (561)
44 1c0p_A D-amino acid oxidase; a 99.4 5.6E-12 1.9E-16 127.6 21.6 38 20-63 4-41 (363)
45 3v76_A Flavoprotein; structura 99.4 1.7E-13 5.9E-18 140.7 10.2 156 18-205 23-188 (417)
46 3kkj_A Amine oxidase, flavin-c 99.4 4.2E-14 1.4E-18 137.3 4.9 41 21-67 1-41 (336)
47 1qo8_A Flavocytochrome C3 fuma 99.4 1.2E-12 4.1E-17 140.5 15.2 171 19-208 118-316 (566)
48 3c4n_A Uncharacterized protein 99.4 2.8E-12 9.4E-17 131.9 16.5 166 21-208 35-241 (405)
49 2ywl_A Thioredoxin reductase r 99.4 1.5E-11 5.1E-16 111.2 19.2 114 23-209 2-115 (180)
50 3nlc_A Uncharacterized protein 99.4 2.3E-12 7.9E-17 136.0 15.7 172 19-218 104-291 (549)
51 4dgk_A Phytoene dehydrogenase; 99.4 3.1E-11 1.1E-15 127.7 24.5 60 131-206 221-280 (501)
52 2qcu_A Aerobic glycerol-3-phos 99.4 5.1E-11 1.7E-15 125.8 25.9 68 126-205 144-211 (501)
53 3dje_A Fructosyl amine: oxygen 99.4 4.6E-12 1.6E-16 131.8 17.0 67 123-205 152-222 (438)
54 2gjc_A Thiazole biosynthetic e 99.4 1.1E-12 3.6E-17 128.6 11.2 161 21-212 64-247 (326)
55 1y0p_A Fumarate reductase flav 99.4 5E-12 1.7E-16 135.8 16.3 169 20-207 124-320 (571)
56 1pj5_A N,N-dimethylglycine oxi 99.4 5.5E-11 1.9E-15 133.4 25.2 75 124-218 144-218 (830)
57 1rp0_A ARA6, thiazole biosynth 99.3 7.4E-12 2.5E-16 122.1 14.1 149 21-209 38-196 (284)
58 4at0_A 3-ketosteroid-delta4-5a 99.3 4.2E-12 1.4E-16 134.5 13.3 63 132-206 203-266 (510)
59 2cul_A Glucose-inhibited divis 99.3 4.6E-12 1.6E-16 119.7 11.2 125 21-206 2-127 (232)
60 4a9w_A Monooxygenase; baeyer-v 99.3 6.2E-12 2.1E-16 126.7 12.4 130 22-205 3-133 (357)
61 2uzz_A N-methyl-L-tryptophan o 99.3 2.2E-11 7.5E-16 123.6 16.3 64 124-205 142-205 (372)
62 2gqf_A Hypothetical protein HI 99.3 6.8E-12 2.3E-16 128.4 12.5 153 21-205 3-169 (401)
63 3g3e_A D-amino-acid oxidase; F 99.3 3.5E-11 1.2E-15 121.2 14.5 52 125-205 136-187 (351)
64 3i6d_A Protoporphyrinogen oxid 99.3 4.8E-11 1.6E-15 125.1 15.4 48 20-67 3-50 (470)
65 1d4d_A Flavocytochrome C fumar 99.3 4.8E-11 1.6E-15 128.0 15.5 174 21-214 125-326 (572)
66 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.8E-11 6.3E-16 130.1 11.6 150 21-205 27-182 (651)
67 3gwf_A Cyclohexanone monooxyge 99.2 3.8E-11 1.3E-15 127.5 13.6 140 20-205 6-148 (540)
68 3cp8_A TRNA uridine 5-carboxym 99.2 2.5E-11 8.5E-16 129.0 12.1 158 12-205 11-175 (641)
69 4ap3_A Steroid monooxygenase; 99.2 4.6E-11 1.6E-15 127.1 13.9 142 18-205 17-160 (549)
70 3ab1_A Ferredoxin--NADP reduct 99.2 4.8E-11 1.6E-15 120.6 13.2 122 20-206 12-133 (360)
71 2zxi_A TRNA uridine 5-carboxym 99.2 2.7E-11 9.2E-16 128.3 11.2 150 21-205 26-181 (637)
72 2wdq_A Succinate dehydrogenase 99.2 6.6E-11 2.2E-15 127.0 14.4 170 20-206 5-208 (588)
73 2zbw_A Thioredoxin reductase; 99.2 4.9E-11 1.7E-15 119.2 12.5 120 21-206 4-123 (335)
74 2rgh_A Alpha-glycerophosphate 99.2 1.2E-09 4.2E-14 116.8 24.1 69 126-205 183-251 (571)
75 2xve_A Flavin-containing monoo 99.2 3E-11 1E-15 126.2 10.8 157 21-205 1-167 (464)
76 3nrn_A Uncharacterized protein 99.2 4.5E-10 1.5E-14 116.0 19.4 39 23-67 1-39 (421)
77 1w4x_A Phenylacetone monooxyge 99.2 1.4E-10 4.7E-15 123.7 15.7 141 19-205 13-155 (542)
78 3ka7_A Oxidoreductase; structu 99.2 3.7E-10 1.3E-14 116.8 18.5 58 131-205 196-253 (425)
79 3uox_A Otemo; baeyer-villiger 99.2 8.4E-11 2.9E-15 125.0 13.0 140 20-205 7-148 (545)
80 1kf6_A Fumarate reductase flav 99.2 9.6E-11 3.3E-15 126.0 12.9 170 20-207 3-200 (602)
81 3lzw_A Ferredoxin--NADP reduct 99.2 9.1E-11 3.1E-15 116.9 10.8 118 21-204 6-123 (332)
82 2h88_A Succinate dehydrogenase 99.2 5.8E-11 2E-15 127.6 9.8 170 19-206 15-219 (621)
83 4fk1_A Putative thioredoxin re 99.2 1.6E-10 5.5E-15 113.8 12.1 35 21-61 5-39 (304)
84 2bs2_A Quinol-fumarate reducta 99.1 1.4E-10 4.7E-15 125.6 11.9 65 131-206 158-222 (660)
85 2gv8_A Monooxygenase; FMO, FAD 99.1 2.1E-10 7.3E-15 119.4 12.9 158 21-205 5-178 (447)
86 3f8d_A Thioredoxin reductase ( 99.1 3.7E-10 1.3E-14 111.9 13.7 115 19-205 12-126 (323)
87 1vdc_A NTR, NADPH dependent th 99.1 2.4E-10 8.3E-15 114.0 11.5 116 21-206 7-126 (333)
88 1jnr_A Adenylylsulfate reducta 99.1 3E-10 1E-14 123.2 13.2 167 20-206 20-220 (643)
89 3itj_A Thioredoxin reductase 1 99.1 2.1E-10 7.3E-15 114.5 10.6 122 18-205 18-143 (338)
90 3cty_A Thioredoxin reductase; 99.1 3.8E-10 1.3E-14 111.9 12.1 115 19-205 13-127 (319)
91 3fbs_A Oxidoreductase; structu 99.1 3.5E-10 1.2E-14 110.7 11.4 112 21-205 1-113 (297)
92 3fpz_A Thiazole biosynthetic e 99.1 1.1E-10 3.8E-15 116.2 7.1 47 21-71 64-110 (326)
93 2q7v_A Thioredoxin reductase; 99.1 5.2E-10 1.8E-14 111.2 11.8 117 21-205 7-124 (325)
94 3d1c_A Flavin-containing putat 99.1 1E-09 3.6E-14 111.0 14.2 141 21-205 3-144 (369)
95 2q0l_A TRXR, thioredoxin reduc 99.1 1.1E-09 3.6E-14 108.2 13.6 114 23-206 2-116 (311)
96 2e5v_A L-aspartate oxidase; ar 99.1 9.3E-10 3.2E-14 115.0 13.8 156 24-206 1-178 (472)
97 1chu_A Protein (L-aspartate ox 99.1 4.9E-10 1.7E-14 119.0 11.3 169 20-206 6-210 (540)
98 2a87_A TRXR, TR, thioredoxin r 99.1 7E-10 2.4E-14 110.8 11.8 116 19-205 11-127 (335)
99 4gcm_A TRXR, thioredoxin reduc 99.0 1E-09 3.4E-14 108.5 11.9 113 21-205 5-117 (312)
100 1fl2_A Alkyl hydroperoxide red 99.0 1.1E-09 3.9E-14 107.9 12.2 115 22-205 1-116 (310)
101 3qj4_A Renalase; FAD/NAD(P)-bi 99.0 6.2E-10 2.1E-14 111.6 10.2 39 23-67 2-43 (342)
102 3gyx_A Adenylylsulfate reducta 99.0 3.3E-10 1.1E-14 122.6 8.7 69 128-206 163-235 (662)
103 1trb_A Thioredoxin reductase; 99.0 1.3E-09 4.3E-14 108.0 11.0 114 21-205 4-117 (320)
104 4a5l_A Thioredoxin reductase; 99.0 9.9E-10 3.4E-14 108.5 9.8 118 22-204 4-121 (314)
105 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.8E-08 6.3E-13 104.1 19.7 39 23-67 2-40 (431)
106 2ivd_A PPO, PPOX, protoporphyr 99.0 3.6E-09 1.2E-13 111.1 14.1 41 21-67 15-55 (478)
107 3lov_A Protoporphyrinogen oxid 99.0 2.5E-08 8.6E-13 104.6 20.0 41 21-67 3-45 (475)
108 3s5w_A L-ornithine 5-monooxyge 99.0 5.7E-10 2E-14 116.7 7.3 152 22-204 30-192 (463)
109 1hyu_A AHPF, alkyl hydroperoxi 98.9 4.5E-09 1.5E-13 111.3 13.2 117 20-205 210-327 (521)
110 3nks_A Protoporphyrinogen oxid 98.9 7.2E-09 2.5E-13 108.7 12.1 41 21-67 1-43 (477)
111 3urh_A Dihydrolipoyl dehydroge 98.9 2.5E-09 8.5E-14 112.7 8.1 43 18-66 21-63 (491)
112 3r9u_A Thioredoxin reductase; 98.9 1.4E-08 4.9E-13 100.0 13.1 115 21-204 3-118 (315)
113 1jb0_C Photosystem I iron-sulf 98.8 5.3E-10 1.8E-14 86.1 1.2 68 481-555 2-72 (80)
114 1v59_A Dihydrolipoamide dehydr 98.8 3.8E-09 1.3E-13 110.9 8.0 40 21-66 4-43 (478)
115 1ojt_A Surface protein; redox- 98.8 3.4E-09 1.2E-13 111.3 7.1 40 21-66 5-44 (482)
116 4b63_A L-ornithine N5 monooxyg 98.8 1.8E-08 6.2E-13 106.1 11.6 159 21-202 38-212 (501)
117 1dxl_A Dihydrolipoamide dehydr 98.8 1.5E-08 5.3E-13 106.0 10.8 41 21-67 5-45 (470)
118 2a8x_A Dihydrolipoyl dehydroge 98.8 1.3E-08 4.3E-13 106.5 9.8 37 22-65 3-39 (464)
119 1bc6_A 7-Fe ferredoxin; electr 98.8 2.2E-09 7.4E-14 81.9 2.8 55 485-548 3-57 (77)
120 7fd1_A FD1, protein (7-Fe ferr 98.8 2E-09 7E-14 87.7 2.7 56 485-549 3-58 (106)
121 1xer_A Ferredoxin; electron tr 98.8 1.5E-09 5.1E-14 88.1 1.7 64 480-550 36-103 (103)
122 1h98_A Ferredoxin; electron tr 98.8 1.6E-09 5.4E-14 82.9 1.5 55 486-549 4-58 (78)
123 3oc4_A Oxidoreductase, pyridin 98.8 2.5E-08 8.5E-13 103.8 10.9 40 21-64 1-40 (452)
124 1ebd_A E3BD, dihydrolipoamide 98.8 2.7E-08 9.4E-13 103.6 11.1 38 21-65 2-39 (455)
125 3eun_A Ferredoxin; electron tr 98.7 2.6E-09 8.9E-14 82.6 2.5 54 484-548 2-61 (82)
126 3l8k_A Dihydrolipoyl dehydroge 98.7 8E-09 2.7E-13 108.0 6.7 41 21-67 3-43 (466)
127 1q1r_A Putidaredoxin reductase 98.7 1.3E-08 4.3E-13 105.3 7.9 37 21-63 3-41 (431)
128 2v2k_A Ferredoxin; iron, trans 98.7 3.5E-09 1.2E-13 86.2 2.9 55 485-548 3-57 (105)
129 1zmd_A Dihydrolipoyl dehydroge 98.7 2.4E-08 8E-13 104.7 9.9 41 20-66 4-44 (474)
130 3p1w_A Rabgdi protein; GDI RAB 98.7 7.6E-08 2.6E-12 99.4 13.3 58 131-203 256-313 (475)
131 2fdn_A Ferredoxin; electron tr 98.7 3.6E-09 1.2E-13 74.8 2.3 51 487-548 5-55 (55)
132 1dwl_A Ferredoxin I; electron 98.7 1.3E-08 4.4E-13 73.1 5.3 55 485-548 4-59 (59)
133 2vdc_G Glutamate synthase [NAD 98.7 8.9E-09 3E-13 106.9 5.3 40 20-65 120-159 (456)
134 2qae_A Lipoamide, dihydrolipoy 98.7 2.9E-08 9.8E-13 103.9 9.3 40 21-66 1-40 (468)
135 2yqu_A 2-oxoglutarate dehydrog 98.7 4.3E-08 1.5E-12 102.1 9.9 39 22-66 1-39 (455)
136 3kd9_A Coenzyme A disulfide re 98.7 7.7E-08 2.6E-12 100.0 11.7 39 22-64 3-41 (449)
137 3lad_A Dihydrolipoamide dehydr 98.7 5.8E-08 2E-12 101.8 10.7 41 21-67 2-42 (476)
138 3qfa_A Thioredoxin reductase 1 98.7 3.9E-08 1.3E-12 104.1 9.3 36 20-61 30-65 (519)
139 2fgo_A Ferredoxin; allochromat 98.7 8.4E-09 2.9E-13 79.7 3.0 53 485-548 3-61 (82)
140 2bc0_A NADH oxidase; flavoprot 98.7 1.1E-07 3.9E-12 99.8 12.6 40 19-64 32-74 (490)
141 3klj_A NAD(FAD)-dependent dehy 98.7 5.3E-08 1.8E-12 98.9 9.6 111 19-204 6-116 (385)
142 3o0h_A Glutathione reductase; 98.6 6.6E-08 2.2E-12 101.5 10.2 38 22-66 26-63 (484)
143 1xdi_A RV3303C-LPDA; reductase 98.6 5.7E-08 2E-12 102.4 9.5 41 21-66 1-42 (499)
144 3gyx_B Adenylylsulfate reducta 98.6 8.2E-09 2.8E-13 91.0 2.1 63 484-549 3-65 (166)
145 3ics_A Coenzyme A-disulfide re 98.6 8.1E-08 2.8E-12 103.5 10.2 42 19-64 33-74 (588)
146 1jnr_B Adenylylsulfate reducta 98.6 9.1E-09 3.1E-13 89.2 2.2 57 484-548 4-65 (150)
147 4dna_A Probable glutathione re 98.6 4.8E-08 1.7E-12 102.0 8.2 39 21-66 4-42 (463)
148 1rgv_A Ferredoxin; electron tr 98.6 7.6E-09 2.6E-13 79.5 1.5 53 485-548 3-61 (80)
149 3pl8_A Pyranose 2-oxidase; sub 98.6 3E-07 1E-11 99.1 14.0 39 21-65 45-83 (623)
150 3lxd_A FAD-dependent pyridine 98.6 5E-08 1.7E-12 100.3 7.3 39 20-64 7-47 (415)
151 3ef6_A Toluene 1,2-dioxygenase 98.6 1.9E-07 6.6E-12 95.7 11.5 38 21-64 1-40 (410)
152 3dgz_A Thioredoxin reductase 2 98.6 1.4E-07 4.8E-12 99.1 10.6 35 20-60 4-38 (488)
153 4gde_A UDP-galactopyranose mut 98.6 2.6E-08 8.9E-13 105.4 5.0 46 16-67 4-50 (513)
154 1lvl_A Dihydrolipoamide dehydr 98.6 1.7E-07 5.7E-12 97.7 11.0 40 20-66 3-42 (458)
155 3hyw_A Sulfide-quinone reducta 98.6 3.4E-08 1.2E-12 102.1 5.4 38 21-62 1-38 (430)
156 3iwa_A FAD-dependent pyridine 98.6 1.8E-07 6.3E-12 97.8 11.0 39 22-64 3-41 (472)
157 1zk7_A HGII, reductase, mercur 98.6 1.7E-07 6E-12 97.8 10.7 39 21-66 3-41 (467)
158 2hqm_A GR, grase, glutathione 98.6 1.7E-07 5.9E-12 98.2 10.4 39 21-66 10-48 (479)
159 4gut_A Lysine-specific histone 98.6 4.6E-07 1.6E-11 99.7 14.1 41 20-66 334-374 (776)
160 3dk9_A Grase, GR, glutathione 98.6 1.9E-07 6.4E-12 97.9 10.5 40 20-66 18-57 (478)
161 3sx6_A Sulfide-quinone reducta 98.5 5.8E-08 2E-12 100.6 6.2 34 23-62 5-41 (437)
162 3h28_A Sulfide-quinone reducta 98.5 7.7E-08 2.6E-12 99.4 7.1 40 21-64 1-40 (430)
163 2eq6_A Pyruvate dehydrogenase 98.5 1.2E-07 4E-12 99.0 8.5 38 22-66 6-43 (464)
164 4b1b_A TRXR, thioredoxin reduc 98.5 2.1E-07 7E-12 98.4 10.3 38 19-62 39-76 (542)
165 2v3a_A Rubredoxin reductase; a 98.5 1.5E-07 5.2E-12 95.6 8.8 35 21-61 3-39 (384)
166 3k30_A Histamine dehydrogenase 98.5 3E-07 1E-11 100.7 11.6 42 20-67 389-430 (690)
167 3cgb_A Pyridine nucleotide-dis 98.5 2.5E-07 8.6E-12 96.9 10.5 38 23-64 37-74 (480)
168 3i9v_9 NADH-quinone oxidoreduc 98.5 4.2E-08 1.4E-12 88.5 3.8 58 486-549 49-117 (182)
169 2gqw_A Ferredoxin reductase; f 98.5 2E-07 6.9E-12 95.5 9.3 38 20-63 5-44 (408)
170 1fec_A Trypanothione reductase 98.5 3E-07 1E-11 96.6 10.5 32 21-58 2-34 (490)
171 1dax_A Ferredoxin I; electron 98.5 8E-09 2.7E-13 75.6 -1.3 55 485-548 6-62 (64)
172 1mo9_A ORF3; nucleotide bindin 98.5 2.9E-07 9.9E-12 97.5 9.8 42 19-66 40-81 (523)
173 1xhc_A NADH oxidase /nitrite r 98.5 2.3E-07 7.9E-12 93.6 8.4 35 22-63 8-42 (367)
174 2gag_A Heterotetrameric sarcos 98.5 5.4E-07 1.9E-11 102.1 12.3 120 21-204 127-253 (965)
175 2r9z_A Glutathione amide reduc 98.5 4.3E-07 1.5E-11 94.7 10.6 39 21-66 3-41 (463)
176 2zvs_A Uncharacterized ferredo 98.5 2.1E-08 7E-13 78.0 0.4 53 485-548 3-62 (85)
177 1onf_A GR, grase, glutathione 98.5 1.9E-07 6.5E-12 98.4 7.9 39 21-66 1-39 (500)
178 3ic9_A Dihydrolipoamide dehydr 98.5 2.2E-07 7.5E-12 97.7 8.3 39 21-66 7-45 (492)
179 3fg2_P Putative rubredoxin red 98.5 1.1E-06 3.7E-11 89.9 12.8 35 23-63 2-38 (404)
180 1nhp_A NADH peroxidase; oxidor 98.5 4.8E-07 1.6E-11 93.9 10.3 38 23-64 1-38 (447)
181 2wpf_A Trypanothione reductase 98.4 5.2E-07 1.8E-11 94.8 10.5 33 21-59 6-39 (495)
182 3h8l_A NADH oxidase; membrane 98.4 9.8E-08 3.4E-12 97.9 4.8 35 23-63 2-39 (409)
183 3dgh_A TRXR-1, thioredoxin red 98.4 6.7E-07 2.3E-11 93.8 11.0 35 20-60 7-41 (483)
184 3ntd_A FAD-dependent pyridine 98.4 1.8E-06 6E-11 92.5 14.2 38 23-64 2-39 (565)
185 2cdu_A NADPH oxidase; flavoenz 98.4 3.4E-07 1.2E-11 95.2 8.3 38 23-64 1-38 (452)
186 1ges_A Glutathione reductase; 98.4 5.1E-07 1.8E-11 93.7 9.6 39 21-66 3-41 (450)
187 2v3a_A Rubredoxin reductase; a 98.4 1.8E-06 6.1E-11 87.7 13.4 101 22-206 145-245 (384)
188 1gte_A Dihydropyrimidine dehyd 98.4 1.2E-07 4.2E-12 108.1 5.2 58 484-551 947-1008(1025)
189 3qvp_A Glucose oxidase; oxidor 98.4 6.8E-07 2.3E-11 95.1 10.5 61 134-205 230-294 (583)
190 3fg2_P Putative rubredoxin red 98.4 1.9E-06 6.6E-11 88.1 13.4 100 23-205 143-242 (404)
191 1y56_A Hypothetical protein PH 98.4 3.8E-07 1.3E-11 95.8 7.9 114 21-205 107-220 (493)
192 1f2g_A Ferredoxin II; electron 98.4 3.8E-08 1.3E-12 70.3 0.2 52 485-547 4-57 (58)
193 3q9t_A Choline dehydrogenase a 98.4 1E-06 3.5E-11 93.7 11.1 36 21-62 5-41 (577)
194 3lxd_A FAD-dependent pyridine 98.4 2.8E-06 9.4E-11 87.2 14.1 102 22-206 152-253 (415)
195 1q1r_A Putidaredoxin reductase 98.4 3.7E-06 1.2E-10 86.7 14.1 112 22-217 149-261 (431)
196 2vpz_B NRFC protein; oxidoredu 98.4 9.7E-08 3.3E-12 86.6 1.9 57 485-549 53-109 (195)
197 2yqu_A 2-oxoglutarate dehydrog 98.3 1.9E-06 6.4E-11 89.7 11.7 99 22-205 167-265 (455)
198 2bcg_G Secretory pathway GDP d 98.3 3.4E-07 1.2E-11 95.2 6.0 59 131-205 242-301 (453)
199 3or1_B Sulfite reductase beta; 98.3 1E-07 3.4E-12 95.8 1.8 59 486-547 214-275 (386)
200 1mo9_A ORF3; nucleotide bindin 98.3 4E-06 1.4E-10 88.7 14.3 111 23-217 215-328 (523)
201 1ges_A Glutathione reductase; 98.3 3.2E-06 1.1E-10 87.7 12.3 101 22-206 167-267 (450)
202 1m6i_A Programmed cell death p 98.3 5.6E-07 1.9E-11 94.5 6.5 41 20-64 9-49 (493)
203 1nhp_A NADH peroxidase; oxidor 98.3 2.4E-06 8.1E-11 88.7 10.9 100 21-205 148-247 (447)
204 3vrd_B FCCB subunit, flavocyto 98.3 1.5E-06 5E-11 88.9 9.2 36 23-62 3-38 (401)
205 3hdq_A UDP-galactopyranose mut 98.3 5.2E-07 1.8E-11 91.2 5.6 44 18-67 25-68 (397)
206 1rsg_A FMS1 protein; FAD bindi 98.3 4E-07 1.4E-11 96.4 4.9 41 21-67 7-48 (516)
207 4eqs_A Coenzyme A disulfide re 98.3 3E-06 1E-10 87.5 11.4 36 24-63 2-37 (437)
208 2b9w_A Putative aminooxidase; 98.3 6.2E-07 2.1E-11 92.4 5.8 41 21-67 5-46 (424)
209 1rof_A Ferredoxin; electron tr 98.3 5.5E-08 1.9E-12 70.0 -1.6 54 485-548 5-59 (60)
210 3ef6_A Toluene 1,2-dioxygenase 98.3 3.5E-06 1.2E-10 86.3 11.2 110 22-217 143-252 (410)
211 2e1m_A L-glutamate oxidase; L- 98.3 7.9E-07 2.7E-11 89.2 6.0 42 20-67 42-84 (376)
212 2hqm_A GR, grase, glutathione 98.2 5.1E-06 1.7E-10 86.9 12.4 101 22-205 185-286 (479)
213 2yg5_A Putrescine oxidase; oxi 98.2 5.6E-07 1.9E-11 93.6 5.0 41 21-67 4-44 (453)
214 1ps9_A 2,4-dienoyl-COA reducta 98.2 8.4E-07 2.9E-11 96.9 6.5 39 21-65 372-410 (671)
215 2r9z_A Glutathione amide reduc 98.2 5.7E-06 1.9E-10 86.2 12.2 99 22-205 166-265 (463)
216 1hfe_L Protein (Fe-only hydrog 98.2 1.2E-07 4.2E-12 96.6 -0.4 56 482-547 27-83 (421)
217 1s3e_A Amine oxidase [flavin-c 98.2 7.7E-07 2.7E-11 94.3 5.7 41 21-67 3-43 (520)
218 1iqz_A Ferredoxin; iron-sulfer 98.2 1.8E-07 6.2E-12 71.9 0.6 57 484-550 5-71 (81)
219 2eq6_A Pyruvate dehydrogenase 98.2 5.9E-06 2E-10 86.1 11.9 105 22-206 169-273 (464)
220 1v59_A Dihydrolipoamide dehydr 98.2 7.4E-06 2.5E-10 85.7 12.6 106 22-205 183-288 (478)
221 2jae_A L-amino acid oxidase; o 98.2 1.1E-06 3.8E-11 92.3 6.1 41 21-67 10-50 (489)
222 3f8d_A Thioredoxin reductase ( 98.2 7.5E-05 2.6E-09 73.2 18.8 98 22-205 154-252 (323)
223 1cjc_A Protein (adrenodoxin re 98.2 4.3E-07 1.5E-11 94.4 2.3 39 21-65 5-45 (460)
224 1sez_A Protoporphyrinogen oxid 98.2 1.1E-06 3.8E-11 92.6 5.6 41 21-67 12-52 (504)
225 1v0j_A UDP-galactopyranose mut 98.2 1.3E-06 4.6E-11 89.0 5.6 41 22-67 7-47 (399)
226 3mm5_B Sulfite reductase, diss 98.2 1.4E-07 4.8E-12 94.3 -1.7 56 486-547 203-258 (366)
227 2gqw_A Ferredoxin reductase; f 98.2 1.3E-05 4.5E-10 81.9 13.0 97 22-206 145-241 (408)
228 1lqt_A FPRA; NADP+ derivative, 98.2 4E-07 1.4E-11 94.5 1.4 44 22-65 3-47 (456)
229 3cgb_A Pyridine nucleotide-dis 98.1 1.2E-05 4.2E-10 84.0 12.3 99 21-205 185-283 (480)
230 1i8t_A UDP-galactopyranose mut 98.1 1.4E-06 4.8E-11 87.8 4.9 40 22-67 1-40 (367)
231 2ivf_B Ethylbenzene dehydrogen 98.1 6.5E-07 2.2E-11 88.1 2.0 58 485-549 146-203 (352)
232 1ebd_A E3BD, dihydrolipoamide 98.1 1.1E-05 3.9E-10 83.7 11.6 102 22-205 170-271 (455)
233 1onf_A GR, grase, glutathione 98.1 2.3E-05 7.8E-10 82.4 14.0 100 22-205 176-276 (500)
234 1xhc_A NADH oxidase /nitrite r 98.1 1.1E-05 3.7E-10 81.3 10.9 93 23-206 144-236 (367)
235 2vvm_A Monoamine oxidase N; FA 98.1 1.7E-06 5.8E-11 91.0 5.2 39 23-67 40-78 (495)
236 2cdu_A NADPH oxidase; flavoenz 98.1 1.4E-05 4.9E-10 82.9 11.9 100 22-205 149-248 (452)
237 1q16_B Respiratory nitrate red 98.1 1E-06 3.6E-11 90.3 3.0 59 485-550 179-237 (512)
238 2bi7_A UDP-galactopyranose mut 98.1 2.1E-06 7.3E-11 87.0 5.3 40 22-67 3-42 (384)
239 1ti6_B Pyrogallol hydroxytrans 98.1 1E-06 3.5E-11 84.1 2.7 57 485-550 63-119 (274)
240 4dsg_A UDP-galactopyranose mut 98.1 2.5E-06 8.7E-11 89.2 5.6 43 20-68 7-50 (484)
241 1lvl_A Dihydrolipoamide dehydr 98.1 1.1E-05 3.8E-10 83.8 10.2 99 22-205 171-269 (458)
242 1zmd_A Dihydrolipoyl dehydroge 98.1 2.7E-05 9.2E-10 81.3 13.0 106 22-205 178-283 (474)
243 1kqf_B FDH-N beta S, formate d 98.1 9.1E-07 3.1E-11 85.6 1.6 57 485-549 95-152 (294)
244 1xdi_A RV3303C-LPDA; reductase 98.0 2.9E-05 1E-09 81.6 13.2 100 22-206 182-281 (499)
245 3oc4_A Oxidoreductase, pyridin 98.0 3.2E-05 1.1E-09 80.2 12.9 99 22-205 147-245 (452)
246 2iid_A L-amino-acid oxidase; f 98.0 4.3E-06 1.5E-10 88.0 6.1 42 20-67 31-72 (498)
247 1sj1_A Ferredoxin; thermostabi 98.0 4.4E-07 1.5E-11 66.5 -1.1 55 484-548 5-64 (66)
248 2bc0_A NADH oxidase; flavoprot 98.0 2.4E-05 8.3E-10 82.0 11.7 99 22-205 194-292 (490)
249 3fim_B ARYL-alcohol oxidase; A 98.0 1.7E-06 5.8E-11 91.8 2.8 37 22-63 2-38 (566)
250 3ntd_A FAD-dependent pyridine 98.0 2.9E-05 9.8E-10 83.1 12.4 125 23-217 152-278 (565)
251 4g6h_A Rotenone-insensitive NA 98.0 9.7E-06 3.3E-10 85.1 8.4 39 18-62 38-76 (502)
252 1zk7_A HGII, reductase, mercur 98.0 3.9E-05 1.3E-09 79.9 13.0 97 22-205 176-272 (467)
253 3j16_B RLI1P; ribosome recycli 98.0 1.5E-06 5.2E-11 92.6 2.2 64 480-550 6-76 (608)
254 1d5t_A Guanine nucleotide diss 98.0 5.2E-06 1.8E-10 85.6 6.2 58 131-205 234-291 (433)
255 2qae_A Lipoamide, dihydrolipoy 98.0 3.8E-05 1.3E-09 80.0 12.7 103 22-205 174-277 (468)
256 3o0h_A Glutathione reductase; 98.0 3.4E-05 1.2E-09 80.7 12.3 100 21-205 190-289 (484)
257 1trb_A Thioredoxin reductase; 98.0 5E-05 1.7E-09 74.6 12.8 102 22-204 145-247 (320)
258 2c42_A Pyruvate-ferredoxin oxi 98.0 3.9E-06 1.3E-10 96.1 4.8 61 483-549 681-765 (1231)
259 3iwa_A FAD-dependent pyridine 97.9 6.2E-05 2.1E-09 78.5 13.3 111 22-217 159-269 (472)
260 2wpf_A Trypanothione reductase 97.9 5.5E-05 1.9E-09 79.3 12.9 103 22-205 191-293 (495)
261 1ojt_A Surface protein; redox- 97.9 1.6E-05 5.5E-10 83.2 8.4 104 22-206 185-288 (482)
262 1dxl_A Dihydrolipoamide dehydr 97.9 2.8E-05 9.4E-10 81.1 10.2 104 22-205 177-280 (470)
263 4dna_A Probable glutathione re 97.9 5.4E-05 1.8E-09 78.8 12.3 99 22-205 170-269 (463)
264 1fec_A Trypanothione reductase 97.9 5.5E-05 1.9E-09 79.2 12.3 103 22-205 187-289 (490)
265 1m6i_A Programmed cell death p 97.9 5.2E-05 1.8E-09 79.5 12.0 104 22-205 180-283 (493)
266 2a8x_A Dihydrolipoyl dehydroge 97.9 6.2E-05 2.1E-09 78.3 12.5 102 22-205 171-272 (464)
267 3mm5_A Sulfite reductase, diss 97.9 1E-06 3.6E-11 88.6 -1.2 54 486-545 246-301 (418)
268 3urh_A Dihydrolipoyl dehydroge 97.9 8E-05 2.7E-09 78.1 12.8 104 22-205 198-301 (491)
269 3ic9_A Dihydrolipoamide dehydr 97.9 9.3E-05 3.2E-09 77.5 13.1 103 21-205 173-275 (492)
270 3ics_A Coenzyme A-disulfide re 97.9 7.4E-05 2.5E-09 80.2 12.6 107 22-217 187-293 (588)
271 2zbw_A Thioredoxin reductase; 97.9 7.2E-05 2.5E-09 74.0 11.5 102 22-205 152-253 (335)
272 3dk9_A Grase, GR, glutathione 97.8 0.00012 4E-09 76.5 13.2 108 21-204 186-293 (478)
273 3ab1_A Ferredoxin--NADP reduct 97.8 7.1E-05 2.4E-09 74.9 11.1 101 22-204 163-263 (360)
274 3g5s_A Methylenetetrahydrofola 97.8 1.5E-05 5.1E-10 79.0 5.5 37 23-65 2-38 (443)
275 3lad_A Dihydrolipoamide dehydr 97.8 0.00011 3.7E-09 76.7 12.6 101 22-204 180-280 (476)
276 1b37_A Protein (polyamine oxid 97.8 1.3E-05 4.6E-10 83.6 5.4 41 21-67 3-44 (472)
277 1fl2_A Alkyl hydroperoxide red 97.8 0.00017 5.9E-09 70.3 13.1 96 23-203 145-241 (310)
278 4b1b_A TRXR, thioredoxin reduc 97.8 0.00013 4.3E-09 77.0 12.2 101 20-206 221-321 (542)
279 2z3y_A Lysine-specific histone 97.8 2E-05 7E-10 85.7 6.2 41 20-66 105-145 (662)
280 3dgh_A TRXR-1, thioredoxin red 97.8 0.00013 4.6E-09 76.2 12.0 103 22-204 187-289 (483)
281 3itj_A Thioredoxin reductase 1 97.8 0.00018 6.2E-09 71.0 12.3 98 22-204 173-271 (338)
282 3cty_A Thioredoxin reductase; 97.7 0.00017 5.7E-09 70.9 11.9 97 23-204 156-252 (319)
283 2xag_A Lysine-specific histone 97.7 2.6E-05 8.9E-10 86.4 6.5 41 20-66 276-316 (852)
284 1o94_A Tmadh, trimethylamine d 97.7 2.5E-05 8.4E-10 86.0 6.2 41 20-66 387-427 (729)
285 3kd9_A Coenzyme A disulfide re 97.7 0.00015 5.3E-09 74.9 11.8 97 23-205 149-245 (449)
286 3c8y_A Iron hydrogenase 1; dit 97.7 3.1E-06 1E-10 89.9 -1.6 59 484-548 141-208 (574)
287 4eqs_A Coenzyme A disulfide re 97.7 0.0001 3.4E-09 76.0 9.7 93 23-204 148-240 (437)
288 3dgz_A Thioredoxin reductase 2 97.7 0.00035 1.2E-08 73.0 13.9 104 22-205 185-288 (488)
289 4gcm_A TRXR, thioredoxin reduc 97.7 0.00063 2.2E-08 66.4 14.7 35 23-63 146-180 (312)
290 1gte_A Dihydropyrimidine dehyd 97.7 1E-05 3.5E-10 92.3 2.0 40 21-66 186-226 (1025)
291 1ti6_B Pyrogallol hydroxytrans 97.7 1.6E-05 5.4E-10 75.8 2.9 53 483-548 92-157 (274)
292 2x8g_A Thioredoxin glutathione 97.6 3.7E-05 1.3E-09 82.8 4.9 35 20-60 105-139 (598)
293 3d1c_A Flavin-containing putat 97.6 0.00022 7.4E-09 71.5 10.2 105 23-205 167-273 (369)
294 3r9u_A Thioredoxin reductase; 97.6 0.00029 9.8E-09 68.8 10.7 97 22-203 147-243 (315)
295 2q0l_A TRXR, thioredoxin reduc 97.6 0.00048 1.7E-08 67.1 12.3 98 22-204 143-241 (311)
296 1h0h_B Formate dehydrogenase ( 97.6 7.9E-06 2.7E-10 75.1 -0.7 57 486-549 68-129 (214)
297 1kdg_A CDH, cellobiose dehydro 97.5 5.4E-05 1.8E-09 80.5 5.2 37 20-62 5-41 (546)
298 3qfa_A Thioredoxin reductase 1 97.5 0.00072 2.5E-08 71.2 13.8 104 22-204 210-315 (519)
299 4g6h_A Rotenone-insensitive NA 97.5 0.00045 1.5E-08 72.4 11.9 107 23-204 218-332 (502)
300 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.0006 2E-08 71.9 12.5 97 22-203 355-452 (521)
301 3t37_A Probable dehydrogenase; 97.5 5E-05 1.7E-09 80.4 4.3 37 21-62 16-52 (526)
302 1vdc_A NTR, NADPH dependent th 97.5 0.00055 1.9E-08 67.5 11.6 99 22-204 159-259 (333)
303 2q7v_A Thioredoxin reductase; 97.5 0.00071 2.4E-08 66.5 12.3 96 23-204 153-249 (325)
304 3ayj_A Pro-enzyme of L-phenyla 97.5 4.9E-05 1.7E-09 82.0 3.9 36 22-63 56-100 (721)
305 1cjc_A Protein (adrenodoxin re 97.5 0.00067 2.3E-08 70.2 12.0 37 332-373 360-397 (460)
306 2x8g_A Thioredoxin glutathione 97.5 0.00084 2.9E-08 72.1 13.1 32 23-60 287-318 (598)
307 2ivf_B Ethylbenzene dehydrogen 97.5 3.3E-05 1.1E-09 75.9 1.9 53 483-548 177-238 (352)
308 3or1_A Sulfite reductase alpha 97.4 3.2E-05 1.1E-09 77.7 1.7 41 500-545 278-318 (437)
309 3klj_A NAD(FAD)-dependent dehy 97.4 0.0001 3.6E-09 74.5 5.1 35 23-63 147-181 (385)
310 2vpz_B NRFC protein; oxidoredu 97.4 3.2E-05 1.1E-09 69.9 0.8 52 483-548 83-143 (195)
311 3s5w_A L-ornithine 5-monooxyge 97.4 0.0017 5.8E-08 67.3 13.9 38 22-63 227-264 (463)
312 1q16_B Respiratory nitrate red 97.3 5.4E-05 1.8E-09 77.7 1.7 52 484-548 211-271 (512)
313 4fk1_A Putative thioredoxin re 97.3 0.0008 2.7E-08 65.5 10.1 40 329-372 262-301 (304)
314 1h0h_B Formate dehydrogenase ( 97.3 3.2E-05 1.1E-09 71.1 -0.6 52 484-548 102-164 (214)
315 1gpe_A Protein (glucose oxidas 97.3 0.00018 6.3E-09 76.8 5.1 38 20-63 22-60 (587)
316 2vdc_G Glutamate synthase [NAD 97.3 0.00055 1.9E-08 70.7 8.5 109 22-204 264-378 (456)
317 1n4w_A CHOD, cholesterol oxida 97.3 0.00019 6.4E-09 75.4 5.0 38 20-63 3-40 (504)
318 2pa8_D DNA-directed RNA polyme 97.2 6.2E-05 2.1E-09 71.5 1.0 44 499-547 176-219 (265)
319 3lzw_A Ferredoxin--NADP reduct 97.2 0.0027 9.2E-08 62.3 12.7 97 22-204 154-250 (332)
320 3bk7_A ABC transporter ATP-bin 97.2 0.00011 3.8E-09 78.4 2.5 61 480-547 19-86 (607)
321 3fbs_A Oxidoreductase; structu 97.2 0.00074 2.5E-08 65.2 8.3 38 331-373 257-294 (297)
322 3l8k_A Dihydrolipoyl dehydroge 97.2 0.0011 3.7E-08 68.9 10.0 102 22-205 172-273 (466)
323 3i9v_3 NADH-quinone oxidoreduc 97.2 7E-05 2.4E-09 82.7 0.7 58 484-548 175-238 (783)
324 2a87_A TRXR, TR, thioredoxin r 97.2 0.0011 3.9E-08 65.3 9.5 35 22-62 155-189 (335)
325 4a5l_A Thioredoxin reductase; 97.2 0.0021 7.3E-08 62.5 11.1 34 23-62 153-186 (314)
326 1coy_A Cholesterol oxidase; ox 97.1 0.00034 1.2E-08 73.4 5.6 37 20-62 9-45 (507)
327 1kqf_B FDH-N beta S, formate d 97.1 7.1E-05 2.4E-09 72.3 0.3 52 484-548 127-187 (294)
328 1vg0_A RAB proteins geranylger 97.0 0.00063 2.2E-08 72.5 6.2 42 20-67 6-47 (650)
329 1ju2_A HydroxynitrIle lyase; f 97.0 0.0003 1E-08 74.4 3.2 36 21-63 25-60 (536)
330 2gag_A Heterotetrameric sarcos 97.0 0.0017 5.9E-08 73.5 9.4 100 23-206 285-385 (965)
331 2jbv_A Choline oxidase; alcoho 96.9 0.00049 1.7E-08 72.9 4.5 38 21-63 12-49 (546)
332 1lqt_A FPRA; NADP+ derivative, 96.9 0.0035 1.2E-07 64.7 10.0 36 332-372 352-388 (456)
333 3uox_A Otemo; baeyer-villiger 96.8 0.00024 8.1E-09 75.3 0.9 35 22-62 185-219 (545)
334 3gwf_A Cyclohexanone monooxyge 96.8 0.00034 1.2E-08 73.9 1.5 35 22-62 178-212 (540)
335 3eun_A Ferredoxin; electron tr 96.6 0.0012 4.1E-08 50.3 2.9 24 524-547 2-25 (82)
336 4ap3_A Steroid monooxygenase; 96.5 0.0051 1.8E-07 65.0 8.7 35 22-62 191-225 (549)
337 1o94_A Tmadh, trimethylamine d 96.5 0.0055 1.9E-07 67.3 8.7 33 23-61 529-563 (729)
338 1dax_A Ferredoxin I; electron 96.4 0.00077 2.6E-08 48.5 1.1 26 522-548 3-28 (64)
339 1dwl_A Ferredoxin I; electron 96.4 0.0021 7.3E-08 45.1 3.3 25 523-548 2-26 (59)
340 1iqz_A Ferredoxin; iron-sulfer 96.3 0.0016 5.3E-08 49.5 2.1 26 522-548 3-28 (81)
341 1ps9_A 2,4-dienoyl-COA reducta 96.3 0.013 4.3E-07 63.8 10.0 29 22-56 494-522 (671)
342 2zvs_A Uncharacterized ferredo 96.3 0.0018 6.1E-08 49.7 2.3 25 524-548 2-26 (85)
343 3h28_A Sulfide-quinone reducta 96.2 0.017 5.8E-07 59.1 10.0 44 331-374 286-336 (430)
344 2fgo_A Ferredoxin; allochromat 96.2 0.0017 5.8E-08 49.4 1.8 24 525-548 3-26 (82)
345 1xer_A Ferredoxin; electron tr 96.2 0.0018 6.1E-08 51.7 2.0 28 522-549 37-64 (103)
346 2fdn_A Ferredoxin; electron tr 96.1 0.0025 8.4E-08 44.1 2.4 25 523-548 2-26 (55)
347 1rgv_A Ferredoxin; electron tr 96.1 0.0015 5.2E-08 49.4 1.2 24 525-548 3-26 (80)
348 1sj1_A Ferredoxin; thermostabi 96.1 0.0024 8.1E-08 46.0 2.2 27 521-548 2-28 (66)
349 3sx6_A Sulfide-quinone reducta 96.1 0.02 7E-07 58.6 10.1 44 331-374 297-347 (437)
350 1jb0_C Photosystem I iron-sulf 96.1 0.002 6.8E-08 48.6 1.8 27 523-549 3-29 (80)
351 2xve_A Flavin-containing monoo 96.0 0.015 5.1E-07 60.1 8.7 35 22-62 197-231 (464)
352 3h8l_A NADH oxidase; membrane 96.0 0.031 1.1E-06 56.6 11.0 52 133-205 220-271 (409)
353 3vrd_B FCCB subunit, flavocyto 95.9 0.031 1.1E-06 56.4 10.5 42 331-374 286-327 (401)
354 3fwz_A Inner membrane protein 95.9 0.011 3.7E-07 50.0 5.7 38 19-62 4-41 (140)
355 2g1u_A Hypothetical protein TM 95.8 0.0086 3E-07 51.6 4.7 36 21-62 18-53 (155)
356 4b63_A L-ornithine N5 monooxyg 95.6 0.085 2.9E-06 55.0 12.5 36 23-62 247-282 (501)
357 1id1_A Putative potassium chan 95.6 0.025 8.6E-07 48.5 7.0 34 22-61 3-36 (153)
358 4a9w_A Monooxygenase; baeyer-v 95.5 0.023 7.7E-07 56.0 7.3 33 22-61 163-195 (357)
359 1rof_A Ferredoxin; electron tr 95.4 0.0043 1.5E-07 43.6 1.1 24 523-547 3-26 (60)
360 1bc6_A 7-Fe ferredoxin; electr 95.3 0.0086 2.9E-07 44.7 2.7 25 524-548 2-28 (77)
361 1f2g_A Ferredoxin II; electron 95.2 0.0031 1.1E-07 44.1 -0.1 23 523-547 2-24 (58)
362 2vvm_A Monoamine oxidase N; FA 95.1 2.2 7.5E-05 43.9 21.3 59 130-205 254-313 (495)
363 3ic5_A Putative saccharopine d 95.1 0.021 7.1E-07 46.2 4.6 35 21-61 4-39 (118)
364 1lss_A TRK system potassium up 94.8 0.026 8.8E-07 47.3 4.6 33 23-61 5-37 (140)
365 1h98_A Ferredoxin; electron tr 94.8 0.0074 2.5E-07 45.2 1.0 25 524-548 2-28 (78)
366 7fd1_A FD1, protein (7-Fe ferr 94.6 0.0083 2.8E-07 48.0 1.0 25 524-548 2-28 (106)
367 3llv_A Exopolyphosphatase-rela 94.6 0.031 1.1E-06 47.0 4.7 33 23-61 7-39 (141)
368 3i9v_9 NADH-quinone oxidoreduc 94.6 0.0091 3.1E-07 53.0 1.2 24 526-549 49-72 (182)
369 2wdq_B Succinate dehydrogenase 94.1 0.0032 1.1E-07 58.8 -3.0 54 485-544 144-220 (238)
370 2c42_A Pyruvate-ferredoxin oxi 93.8 0.011 3.7E-07 68.0 0.1 27 522-548 680-706 (1231)
371 2v2k_A Ferredoxin; iron, trans 93.8 0.016 5.4E-07 46.2 1.0 25 524-548 2-28 (105)
372 1f0y_A HCDH, L-3-hydroxyacyl-C 93.8 0.06 2E-06 52.0 5.2 34 23-62 16-49 (302)
373 3i83_A 2-dehydropantoate 2-red 93.6 0.056 1.9E-06 52.7 4.8 35 21-61 1-35 (320)
374 2hmt_A YUAA protein; RCK, KTN, 93.6 0.056 1.9E-06 45.4 4.1 33 23-61 7-39 (144)
375 1pzg_A LDH, lactate dehydrogen 93.3 0.093 3.2E-06 51.3 5.7 36 21-62 8-44 (331)
376 1hfe_L Protein (Fe-only hydrog 93.2 0.024 8.2E-07 57.5 1.3 27 522-548 27-53 (421)
377 4dio_A NAD(P) transhydrogenase 93.2 0.076 2.6E-06 53.0 4.9 35 22-62 190-224 (405)
378 3l4b_C TRKA K+ channel protien 93.1 0.083 2.8E-06 48.2 4.8 33 24-62 2-34 (218)
379 3ado_A Lambda-crystallin; L-gu 93.1 0.067 2.3E-06 51.8 4.2 34 23-62 7-40 (319)
380 2x5o_A UDP-N-acetylmuramoylala 93.0 0.068 2.3E-06 54.7 4.4 35 23-63 6-40 (439)
381 1kf6_B Fumarate reductase iron 92.9 0.0018 6.2E-08 60.7 -7.0 53 485-543 143-217 (243)
382 3hn2_A 2-dehydropantoate 2-red 92.9 0.073 2.5E-06 51.7 4.3 35 21-61 1-35 (312)
383 3qha_A Putative oxidoreductase 92.8 0.071 2.4E-06 51.3 4.0 37 21-63 14-50 (296)
384 3lk7_A UDP-N-acetylmuramoylala 92.8 0.085 2.9E-06 54.2 4.7 34 22-61 9-42 (451)
385 3dfz_A SIRC, precorrin-2 dehyd 92.5 0.11 3.7E-06 47.5 4.5 34 21-60 30-63 (223)
386 3p2y_A Alanine dehydrogenase/p 92.5 0.092 3.1E-06 52.0 4.3 35 22-62 184-218 (381)
387 2bcg_G Secretory pathway GDP d 92.4 0.21 7.1E-06 51.3 7.2 43 21-69 10-52 (453)
388 3gg2_A Sugar dehydrogenase, UD 92.4 0.11 3.7E-06 53.2 4.9 34 23-62 3-36 (450)
389 3g17_A Similar to 2-dehydropan 92.4 0.094 3.2E-06 50.4 4.2 35 21-61 1-35 (294)
390 4e12_A Diketoreductase; oxidor 92.3 0.13 4.5E-06 49.0 5.2 34 23-62 5-38 (283)
391 3doj_A AT3G25530, dehydrogenas 92.3 0.12 4.1E-06 50.1 4.9 35 22-62 21-55 (310)
392 3k96_A Glycerol-3-phosphate de 92.3 0.13 4.4E-06 50.9 5.2 36 21-62 28-63 (356)
393 2h88_B Succinate dehydrogenase 92.1 0.0063 2.1E-07 57.3 -4.4 54 485-544 153-229 (252)
394 3vtf_A UDP-glucose 6-dehydroge 92.0 0.17 5.9E-06 51.2 5.8 44 13-62 12-55 (444)
395 2ewd_A Lactate dehydrogenase,; 91.9 0.16 5.5E-06 49.3 5.3 34 22-61 4-38 (317)
396 1lld_A L-lactate dehydrogenase 91.9 0.14 4.7E-06 49.8 4.8 34 22-61 7-42 (319)
397 3hyw_A Sulfide-quinone reducta 91.9 1.5 5.2E-05 44.3 12.9 54 134-204 203-256 (430)
398 2ew2_A 2-dehydropantoate 2-red 91.9 0.14 4.7E-06 49.6 4.8 33 23-61 4-36 (316)
399 2hjr_A Malate dehydrogenase; m 91.8 0.16 5.4E-06 49.6 5.2 36 21-62 13-49 (328)
400 4g65_A TRK system potassium up 91.7 0.096 3.3E-06 53.8 3.5 53 23-81 4-64 (461)
401 1ks9_A KPA reductase;, 2-dehyd 91.6 0.16 5.6E-06 48.4 5.0 33 24-62 2-34 (291)
402 1z82_A Glycerol-3-phosphate de 91.6 0.15 5.2E-06 50.0 4.8 36 20-61 12-47 (335)
403 1d5t_A Guanine nucleotide diss 91.6 0.19 6.5E-06 51.2 5.7 41 21-67 5-45 (433)
404 1kyq_A Met8P, siroheme biosynt 91.6 0.095 3.3E-06 49.5 3.1 34 22-61 13-46 (274)
405 2raf_A Putative dinucleotide-b 91.5 0.19 6.4E-06 45.5 5.0 34 23-62 20-53 (209)
406 3cf4_A Acetyl-COA decarboxylas 91.5 0.0071 2.4E-07 66.2 -5.4 53 486-545 413-470 (807)
407 2dpo_A L-gulonate 3-dehydrogen 91.4 0.16 5.6E-06 49.3 4.7 34 23-62 7-40 (319)
408 3l9w_A Glutathione-regulated p 91.4 0.2 6.8E-06 50.6 5.4 34 23-62 5-38 (413)
409 1x13_A NAD(P) transhydrogenase 91.3 0.15 5.1E-06 51.3 4.4 35 22-62 172-206 (401)
410 3g0o_A 3-hydroxyisobutyrate de 91.3 0.18 6.1E-06 48.7 4.9 36 21-62 6-41 (303)
411 1ur5_A Malate dehydrogenase; o 91.3 0.19 6.6E-06 48.6 5.1 34 22-61 2-36 (309)
412 3ego_A Probable 2-dehydropanto 91.2 0.18 6.1E-06 48.8 4.8 34 21-61 1-34 (307)
413 3ghy_A Ketopantoate reductase 91.2 0.18 6.2E-06 49.4 4.9 32 23-60 4-35 (335)
414 1l7d_A Nicotinamide nucleotide 91.2 0.18 6E-06 50.5 4.9 35 22-62 172-206 (384)
415 4a7p_A UDP-glucose dehydrogena 91.0 0.2 6.9E-06 51.0 5.1 36 22-63 8-43 (446)
416 3k6j_A Protein F01G10.3, confi 90.9 0.3 1E-05 49.8 6.2 34 23-62 55-88 (460)
417 2y0c_A BCEC, UDP-glucose dehyd 90.8 0.2 6.8E-06 51.7 4.9 35 22-62 8-42 (478)
418 1evy_A Glycerol-3-phosphate de 90.8 0.15 5.3E-06 50.6 3.9 32 24-61 17-48 (366)
419 2gv8_A Monooxygenase; FMO, FAD 90.7 0.19 6.4E-06 51.5 4.6 36 22-63 212-248 (447)
420 1pjc_A Protein (L-alanine dehy 90.7 0.2 6.7E-06 49.7 4.5 33 23-61 168-200 (361)
421 3c85_A Putative glutathione-re 90.7 0.31 1.1E-05 42.8 5.5 36 22-62 39-74 (183)
422 3oj0_A Glutr, glutamyl-tRNA re 90.6 0.087 3E-06 44.5 1.7 34 22-61 21-54 (144)
423 1jw9_B Molybdopterin biosynthe 90.6 0.22 7.5E-06 46.5 4.5 35 22-62 31-66 (249)
424 1bg6_A N-(1-D-carboxylethyl)-L 90.6 0.22 7.6E-06 49.1 4.9 33 23-61 5-37 (359)
425 1zej_A HBD-9, 3-hydroxyacyl-CO 90.5 0.24 8.1E-06 47.4 4.8 35 21-62 11-45 (293)
426 4ezb_A Uncharacterized conserv 90.5 0.2 6.8E-06 48.7 4.3 36 20-61 22-58 (317)
427 3tl2_A Malate dehydrogenase; c 90.5 0.26 9E-06 47.6 5.2 34 22-61 8-42 (315)
428 3l6d_A Putative oxidoreductase 90.5 0.33 1.1E-05 46.8 5.9 36 21-62 8-43 (306)
429 3gvi_A Malate dehydrogenase; N 90.3 0.28 9.5E-06 47.7 5.2 35 22-62 7-42 (324)
430 3eag_A UDP-N-acetylmuramate:L- 90.3 0.23 7.7E-06 48.5 4.6 34 23-62 5-39 (326)
431 1y6j_A L-lactate dehydrogenase 90.2 0.26 9E-06 47.8 4.9 34 22-61 7-42 (318)
432 2a9f_A Putative malic enzyme ( 90.1 0.25 8.4E-06 48.8 4.6 36 20-61 186-222 (398)
433 2p4q_A 6-phosphogluconate dehy 90.0 0.28 9.5E-06 50.8 5.2 37 20-62 8-44 (497)
434 2v6b_A L-LDH, L-lactate dehydr 89.7 0.29 9.8E-06 47.2 4.7 32 24-61 2-35 (304)
435 3pid_A UDP-glucose 6-dehydroge 89.6 0.31 1E-05 49.3 4.9 42 14-62 28-69 (432)
436 4huj_A Uncharacterized protein 89.5 0.23 7.8E-06 45.4 3.6 34 23-62 24-58 (220)
437 3ggo_A Prephenate dehydrogenas 89.5 0.37 1.3E-05 46.6 5.3 37 20-62 31-69 (314)
438 3dtt_A NADP oxidoreductase; st 89.4 0.33 1.1E-05 45.1 4.7 37 20-62 17-53 (245)
439 1t2d_A LDH-P, L-lactate dehydr 89.4 0.37 1.3E-05 46.8 5.3 33 23-61 5-38 (322)
440 1vpd_A Tartronate semialdehyde 89.4 0.26 8.8E-06 47.3 4.1 36 21-62 4-39 (299)
441 1guz_A Malate dehydrogenase; o 89.3 0.35 1.2E-05 46.8 5.0 35 24-62 2-36 (310)
442 1zcj_A Peroxisomal bifunctiona 89.3 0.28 9.6E-06 50.4 4.6 34 23-62 38-71 (463)
443 2bs2_B Quinol-fumarate reducta 89.2 0.012 4E-07 55.1 -5.5 52 486-543 147-221 (241)
444 3pef_A 6-phosphogluconate dehy 89.2 0.31 1.1E-05 46.4 4.6 34 23-62 2-35 (287)
445 3phh_A Shikimate dehydrogenase 89.2 0.37 1.3E-05 45.3 4.9 35 22-62 118-152 (269)
446 2uyy_A N-PAC protein; long-cha 89.2 0.4 1.4E-05 46.4 5.3 34 23-62 31-64 (316)
447 2aef_A Calcium-gated potassium 89.1 0.25 8.6E-06 45.5 3.7 34 22-62 9-42 (234)
448 3pqe_A L-LDH, L-lactate dehydr 89.1 0.39 1.3E-05 46.7 5.1 34 22-61 5-40 (326)
449 1vg0_A RAB proteins geranylger 89.1 0.96 3.3E-05 48.1 8.5 57 130-201 377-434 (650)
450 2rcy_A Pyrroline carboxylate r 88.9 0.46 1.6E-05 44.5 5.4 34 23-62 5-42 (262)
451 3gpi_A NAD-dependent epimerase 88.6 0.6 2.1E-05 44.2 6.1 34 23-62 4-37 (286)
452 4gbj_A 6-phosphogluconate dehy 88.6 0.26 8.7E-06 47.4 3.4 38 20-63 3-40 (297)
453 2eez_A Alanine dehydrogenase; 88.6 0.36 1.2E-05 48.0 4.6 34 22-61 166-199 (369)
454 1vl6_A Malate oxidoreductase; 88.5 0.38 1.3E-05 47.4 4.6 35 20-60 190-225 (388)
455 1yj8_A Glycerol-3-phosphate de 88.4 0.36 1.2E-05 48.0 4.6 34 23-62 22-62 (375)
456 3c24_A Putative oxidoreductase 88.4 0.48 1.6E-05 45.1 5.2 33 23-61 12-45 (286)
457 3p7m_A Malate dehydrogenase; p 88.4 0.49 1.7E-05 45.9 5.3 34 23-62 6-40 (321)
458 2vns_A Metalloreductase steap3 88.3 0.44 1.5E-05 43.2 4.7 33 23-61 29-61 (215)
459 2vhw_A Alanine dehydrogenase; 88.3 0.38 1.3E-05 47.9 4.5 34 22-61 168-201 (377)
460 3hwr_A 2-dehydropantoate 2-red 88.3 0.4 1.4E-05 46.5 4.6 33 22-61 19-51 (318)
461 3gt0_A Pyrroline-5-carboxylate 88.2 0.52 1.8E-05 43.8 5.2 34 23-62 3-40 (247)
462 3pdu_A 3-hydroxyisobutyrate de 88.1 0.32 1.1E-05 46.4 3.8 33 24-62 3-35 (287)
463 1nyt_A Shikimate 5-dehydrogena 88.1 0.43 1.5E-05 45.1 4.7 33 23-61 120-152 (271)
464 2egg_A AROE, shikimate 5-dehyd 88.0 0.42 1.4E-05 45.8 4.6 33 23-61 142-175 (297)
465 2izz_A Pyrroline-5-carboxylate 88.0 0.47 1.6E-05 46.1 5.0 34 23-62 23-60 (322)
466 1txg_A Glycerol-3-phosphate de 88.0 0.39 1.3E-05 46.8 4.4 30 24-59 2-31 (335)
467 4dll_A 2-hydroxy-3-oxopropiona 88.0 0.41 1.4E-05 46.5 4.5 35 22-62 31-65 (320)
468 4id9_A Short-chain dehydrogena 87.9 0.77 2.6E-05 44.8 6.6 57 21-83 18-76 (347)
469 3c7a_A Octopine dehydrogenase; 87.9 0.31 1E-05 49.1 3.6 31 23-59 3-34 (404)
470 3d1l_A Putative NADP oxidoredu 87.8 0.49 1.7E-05 44.4 4.8 33 23-61 11-44 (266)
471 1mv8_A GMD, GDP-mannose 6-dehy 87.7 0.36 1.2E-05 49.1 4.1 33 24-62 2-34 (436)
472 2pv7_A T-protein [includes: ch 87.6 0.55 1.9E-05 45.0 5.1 36 21-62 20-56 (298)
473 2z3y_A Lysine-specific histone 87.6 9.5 0.00033 40.9 15.4 37 332-371 623-659 (662)
474 3mog_A Probable 3-hydroxybutyr 87.6 0.51 1.8E-05 48.6 5.1 34 23-62 6-39 (483)
475 3dhn_A NAD-dependent epimerase 87.6 0.73 2.5E-05 41.8 5.8 34 23-62 5-39 (227)
476 1x0v_A GPD-C, GPDH-C, glycerol 87.5 0.37 1.3E-05 47.5 3.9 34 23-62 9-49 (354)
477 3ldh_A Lactate dehydrogenase; 87.4 0.79 2.7E-05 44.4 6.0 35 21-61 20-56 (330)
478 3qvo_A NMRA family protein; st 87.4 0.49 1.7E-05 43.5 4.5 39 18-62 19-59 (236)
479 2r6j_A Eugenol synthase 1; phe 87.3 0.82 2.8E-05 44.0 6.2 36 21-62 10-46 (318)
480 1a5z_A L-lactate dehydrogenase 87.2 0.5 1.7E-05 45.8 4.6 32 24-61 2-35 (319)
481 3d0o_A L-LDH 1, L-lactate dehy 87.2 0.58 2E-05 45.3 5.0 34 22-61 6-41 (317)
482 1oju_A MDH, malate dehydrogena 87.2 0.52 1.8E-05 45.1 4.6 32 24-61 2-35 (294)
483 1n7h_A GDP-D-mannose-4,6-dehyd 87.2 0.77 2.6E-05 45.6 6.1 36 21-62 27-63 (381)
484 2zyd_A 6-phosphogluconate dehy 87.0 0.54 1.8E-05 48.4 4.9 37 20-62 13-49 (480)
485 3qsg_A NAD-binding phosphogluc 86.9 0.51 1.7E-05 45.6 4.5 33 23-61 25-58 (312)
486 3ius_A Uncharacterized conserv 86.9 0.47 1.6E-05 44.9 4.2 36 21-62 4-39 (286)
487 3nep_X Malate dehydrogenase; h 86.9 0.6 2E-05 45.1 4.9 33 24-62 2-36 (314)
488 4e21_A 6-phosphogluconate dehy 86.6 0.61 2.1E-05 46.0 4.9 35 22-62 22-56 (358)
489 3don_A Shikimate dehydrogenase 86.6 0.48 1.6E-05 44.8 4.0 35 22-62 117-152 (277)
490 1hdo_A Biliverdin IX beta redu 86.6 1.2 4E-05 39.5 6.5 34 23-62 4-38 (206)
491 4gwg_A 6-phosphogluconate dehy 86.2 0.7 2.4E-05 47.5 5.2 34 23-62 5-38 (484)
492 2hk9_A Shikimate dehydrogenase 86.1 0.62 2.1E-05 44.1 4.5 33 23-61 130-162 (275)
493 1jay_A Coenzyme F420H2:NADP+ o 86.1 0.63 2.2E-05 41.9 4.4 32 24-61 2-34 (212)
494 3vku_A L-LDH, L-lactate dehydr 86.0 0.74 2.5E-05 44.7 5.0 32 23-60 10-43 (326)
495 3tri_A Pyrroline-5-carboxylate 85.9 0.8 2.7E-05 43.4 5.2 35 22-62 3-40 (280)
496 1yqg_A Pyrroline-5-carboxylate 85.9 0.68 2.3E-05 43.3 4.6 32 24-61 2-34 (263)
497 2h78_A Hibadh, 3-hydroxyisobut 85.8 0.54 1.8E-05 45.1 4.0 34 23-62 4-37 (302)
498 3ktd_A Prephenate dehydrogenas 85.8 0.81 2.8E-05 44.7 5.3 33 23-61 9-41 (341)
499 1ldn_A L-lactate dehydrogenase 85.8 0.8 2.7E-05 44.3 5.2 34 22-61 6-41 (316)
500 4aj2_A L-lactate dehydrogenase 85.8 0.84 2.9E-05 44.4 5.3 36 20-61 17-54 (331)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.1e-89 Score=740.11 Aligned_cols=544 Identities=52% Similarity=0.966 Sum_probs=468.8
Q ss_pred CCCCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccc-cCCccccc
Q psy14496 16 GPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEK-LNKLFNTP 94 (561)
Q Consensus 16 ~~~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~-~~~~~~~~ 94 (561)
+++++|++||+|||||||||++|+.|++...+.+||++|+||||.+.++.+..+|..+.+++++.+++.|. .+.++...
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~ 108 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTP 108 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEE
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeee
Confidence 46777889999999999999999999987555566999999999999888777888999999999988876 44555444
Q ss_pred cchhhhhhhcCCCCcccCCCCCCc-eeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccc
Q psy14496 95 VIEERFLFLSSKKSYKIPSWILPI-CFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNF 173 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~ 173 (561)
+..+.+.++.....+.++ ..|. .+.+.+.+.++|..|.++|.+++++.|++|+++++|+++..++++.+++|.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 109 VTEDRFGILTEKYRIPVP--ILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp CCEEEEEEECSSCEEECC--CCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCE
T ss_pred echhheeeeccCCCcccc--ccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 444445555544333333 1122 2334558899999999999999999999999999999999876678889999877
Q ss_pred ccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCC
Q psy14496 174 GINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPL 253 (561)
Q Consensus 174 ~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 253 (561)
+.+++|+.+.+|++|.+++||+||+|||.+|.+++++..++++.....+..++++++.+|.++.....++...|.++||+
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 76778988889999999999999999999999999998888887766677778888888877766566777789999988
Q ss_pred CCCCCceEEEEEcC--CCeEEEEEEecCCCCCCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeec
Q psy14496 254 DYKTYGGGFLYHME--NNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIF 331 (561)
Q Consensus 254 ~~~~~g~~~~~~~~--~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (561)
.....++.|+||.. ++.+++++....+..++..++.+.++.|+.+|.+.++++.++.+.++.+.++..++...++|..
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEE
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcccc
Confidence 75667788999987 7899999988776656666677889998888999999998888888877777777777889999
Q ss_pred CCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCC--Cccc---hhhHHHHHhhchhhHhhhhhhccchhhh
Q psy14496 332 DGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNN--KFNK---LITYKTSFQASWLYKELYKARNFKPAMK 406 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~--~~~~---l~~y~~~~~~~~~~~~~~~~~~~~~~~~ 406 (561)
+|++|+|||||+++|+.|+|+++||+||.+||+.|...+..++ ...+ |+.|+++++++|+.++++.+++++++|+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~ 426 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCH 426 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGG
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHH
Confidence 9999999999999999999999999999999999999886553 3333 8999999999999999999999999884
Q ss_pred -h-hhhHHHHHHHHHHHHhcCCCCccccCCCCccCCcccccCCCCCCCCCCCCccccccccceeccccccCCCCCCceEE
Q psy14496 407 -K-GLYIGMLIIGIDQILFSGKFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLIL 484 (561)
Q Consensus 407 -~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fd~~~~~~~~~~~~~~~~~~h~~~ 484 (561)
+ |.|.+++..++..|+.+|+.||+++|..+|+.+++++.+..+++||+||++|+||+++|||+|+++|+||||+||+|
T Consensus 427 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~~ 506 (584)
T 2gmh_A 427 GILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 506 (584)
T ss_dssp STTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEEE
T ss_pred HhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEEE
Confidence 4 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCc-eeEEEEccCCCccCCcccccCCCCCeeEECCCCCCCCCCCCC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNK-IQHLQINAQNCIHCKTCDIKDPTQNIEWITPEGGSGTNYPNM 561 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~-~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~p~g~~g~~~~~~ 561 (561)
+|.++|...|...|+++|+++||++||++++++++ ..++++|+++|||||||+++||++||+|++|+||+||+|++|
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg~g~~~~~~ 584 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCSTTCBCCCSCC
T ss_pred cCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCCCchhhCCCCCceeECCCCCCCcCccCC
Confidence 99999988888888999999999999999543222 227999999999999999999999999999999999999998
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.7e-36 Score=310.09 Aligned_cols=331 Identities=17% Similarity=0.222 Sum_probs=221.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
.+|||+|||||||||++|+.|+++ |++|+||||++.++....+|+.+.++.++++ ........+...+.. .
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l-~~~~~~~~~~~~~~~--~ 73 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA-DIKADRSFIANEVKG--A 73 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT-TCCCCTTTEEEEESE--E
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCCCceecccCHHHHHHc-CCCchhhhhhcccce--E
Confidence 359999999999999999999999 9999999999988877777888877776654 111111111111111 1
Q ss_pred hhhcCCCC--cccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 101 LFLSSKKS--YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 101 ~~~~~~~~--~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
.+...... ...... ......+|.++|..|+++|.+.+.+.|++++++++|+++..+ ++.+.++.... +
T Consensus 74 ~~~~~~~~~~~~~~~~----~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~-----~ 143 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSE----KAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRH-----N 143 (397)
T ss_dssp EEECTTCSSCEEEECS----SSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-----T
T ss_pred EEEeCCCceEeecccc----ccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecc-----c
Confidence 11211111 111100 011233789999999999999999999999999999999875 56666665422 1
Q ss_pred CceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCC
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTY 258 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 258 (561)
|+ +.+++||+||+|||.+|.+++. +++.....+... ......+........++.....+++ ....
T Consensus 144 ~~-------~~~~~a~~vIgAdG~~S~vr~~----~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 208 (397)
T 3oz2_A 144 NE-------IVDVRAKMVIAADGFESEFGRW----AGLKSVILARND-IISALQYRMINVDVDPDYTDFYLGS---IAPA 208 (397)
T ss_dssp TE-------EEEEEEEEEEECCCTTCHHHHH----HTCGGGCCCGGG-EEEEEEEEEESCCCCTTEEEEECST---TSTT
T ss_pred cc-------ceEEEEeEEEeCCccccHHHHH----cCCCccccccee-eeeeEEEEeeccccCcccceeeeec---cCCC
Confidence 11 2479999999999999999887 455443222211 1111112222222334434333222 2344
Q ss_pred ceEEEEEcCCCeEEEEEEecCCCCCCCCChHHHHHHhh-hChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEE
Q psy14496 259 GGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYK-THPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFI 337 (561)
Q Consensus 259 g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lv 337 (561)
+..|++|.+++..++++....+.........+.++.+. .+|.+ ...+.+......++.... ..++..+|++++
T Consensus 209 g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~l----~~~~~~~~~~~~~~~~~~--~~~~~~~~v~lv 282 (397)
T 3oz2_A 209 GYIWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKV--KMPITMPGLMLV 282 (397)
T ss_dssp EEEEEEEEETTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCC--CSCCEETTEEEC
T ss_pred ceEEEeecccceeEEEEeeccchhhhhhhHHHHHHHHHHhCccc----cccceeeeeeccccccCc--ccceeeeeEEEc
Confidence 56889999889999998876655443333444555543 34433 334444444444554332 335677999999
Q ss_pred ecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhchh
Q psy14496 338 GCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYKTSFQASWL 391 (561)
Q Consensus 338 GDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~~~ 391 (561)
|||||.++|++|||+++||+||..||+.|.+++..++.+.. |+.|++.+++++.
T Consensus 283 GDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~ 337 (397)
T 3oz2_A 283 GDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFE 337 (397)
T ss_dssp GGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988887665 9999999987753
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1.8e-32 Score=282.72 Aligned_cols=343 Identities=17% Similarity=0.212 Sum_probs=227.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+++||+|||||||||++|+.|++. |++|+|||+.+.++....++..+.+..++++ +.+....... .....+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l-g~~~~~~~~~--~~~~~~ 73 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA-DIKADRSFIA--NEVKGA 73 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT-TCCCCTTTEE--EEESEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCCcccccccCHHHHHHc-CCCCChHHhh--hhcceE
Confidence 469999999999999999999999 9999999999887765556666655555443 2111100000 011112
Q ss_pred hhhcCCCC--cccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 101 LFLSSKKS--YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 101 ~~~~~~~~--~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
.+....+. ..++... ......+.++|..|.+.|.+.+.+.|++++++++|+++..+ ++.+.+|.+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~----- 143 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEK----AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHN----- 143 (397)
T ss_dssp EEECTTCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEET-----
T ss_pred EEEcCCCCEEEEEeccc----cCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEEC-----
Confidence 22222111 1111100 01234789999999999999999999999999999999876 566666776321
Q ss_pred CceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCC-CCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCC
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDN-KKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKT 257 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 257 (561)
.++.+++||+||+|||.+|.+++. +++.. ...+..+..++.. .++.....+......++. ...
T Consensus 144 -------~~~~~~~a~~vV~A~G~~s~~~~~----~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~ 207 (397)
T 3cgv_A 144 -------NEIVDVRAKMVIAADGFESEFGRW----AGLKSVILARNDIISALQY--RMINVDVDPDYTDFYLGS---IAP 207 (397)
T ss_dssp -------TEEEEEEEEEEEECCCTTCHHHHH----HTCCTTCCCGGGEEEEEEE--EEESCCCCTTEEEEECST---TST
T ss_pred -------CeEEEEEcCEEEECCCcchHhHHh----cCCCccCCChhheeEEEEE--EeccCCCCCCcEEEEeCC---cCC
Confidence 124689999999999999998877 56655 3334444344332 222222233333222221 134
Q ss_pred CceEEEEEcCCCeEEEEEEecCCCCCCCCChHHHHHHhhh-ChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEE
Q psy14496 258 YGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKT-HPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAF 336 (561)
Q Consensus 258 ~g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 336 (561)
.+..|++|.+++.+.+++....+.........+.++.+.. .|. +...+........+|..+. .+++..+|+++
T Consensus 208 ~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~l 281 (397)
T 3cgv_A 208 AGYIWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSKV--KMPITMPGLML 281 (397)
T ss_dssp TEEEEEEEEETTEEEEEEEEETTTCSCHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCCC--CSCCEETTEEE
T ss_pred CceEEEEECCCCeEEEEEEeccccccCCCCHHHHHHHHHHhCcC----CCCCeEEeeeeeeeecCCC--ccceeeCCEEE
Confidence 4568889999889999988765432222234445555542 222 2344555555555665433 66788899999
Q ss_pred EecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 337 IGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 337 vGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
+|||||.++|++|+|+++|+.+|..||+.|.+.+..++.+.. |+.|++.+++. +.+.+...+.+.+++
T Consensus 282 iGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3cgv_A 282 VGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998866665445 99999988876 456666666666555
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.4e-31 Score=280.62 Aligned_cols=344 Identities=16% Similarity=0.194 Sum_probs=215.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC-CceeecceeChhhHHhhccccc-cCCccccccchh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG-AHILSGAIIDPRSIFELFPKEK-LNKLFNTPVIEE 98 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g-~~~~~G~~~~~~~l~~l~~~~~-~~~~~~~~~~~~ 98 (561)
+++||+||||||||+++|+.|++. |++|+|||+.+.++ +...+|..+....+.++ ..+. ........ ..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~l-g~~~~~~~~~~~~--~~ 75 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKL-GMPYPKGEELENK--IN 75 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHT-TCCCCCGGGEEEE--EE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCcccccccccHHHHHHh-cCCCCchHHHHhh--hc
Confidence 469999999999999999999999 99999999987642 22234444444444332 1111 00000000 01
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
.+.++.......++ ++ ...+.++|..|.+.|.+.+.+.|++++++++|+++..+ ++.+++|.+.+. .+
T Consensus 76 ~~~~~~~~~~~~~~---~~-----~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~---~~ 143 (453)
T 3atr_A 76 GIKLYSPDMQTVWT---VN-----GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNR---RT 143 (453)
T ss_dssp EEEEECTTSSCEEE---EE-----EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TT
T ss_pred ceEEECCCCceEEe---EC-----CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEc---CC
Confidence 11122221111110 11 12678999999999999999999999999999999875 556666766320 02
Q ss_pred CceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCC----CCCccccceeEEEEeeCCCccCCCcEEEEeccCCC
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNK----KDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 254 (561)
|+ ..+++||+||+|||.+|.+++. ++...+ ..+..+..++...+........+......++.+.
T Consensus 144 G~-------~~~~~ad~VV~AdG~~s~vr~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 211 (453)
T 3atr_A 144 NE-------ELTVYSKVVVEATGYSRSFRSK----LPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQET- 211 (453)
T ss_dssp TE-------EEEEECSEEEECCGGGCTTGGG----SCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTT-
T ss_pred Cc-------eEEEEcCEEEECcCCchhhHHh----cCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCC-
Confidence 21 1379999999999999999877 554421 1222334555554544432222333322222111
Q ss_pred CCCCceEEEEEcCCCeEEEEEEecCCCCCCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCE
Q psy14496 255 YKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGG 334 (561)
Q Consensus 255 ~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 334 (561)
...++.|++|.+++.+++++....+.. .....+.+..+... +.+.+...+.+......++.. ...++|..+|+
T Consensus 212 -~~~g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~v 284 (453)
T 3atr_A 212 -SPGGYWWYFPKGKNKVNVGLGIQGGMG--YPSIHEYYKKYLDK--YAPDVDKSKLLVKGGALVPTR--RPLYTMAWNGI 284 (453)
T ss_dssp -STTSCEEEEEEETTEEEEEEEEESSSC--CCCHHHHHHHHHHH--HCTTEEEEEEEEEEEEEEECS--SCCSCSEETTE
T ss_pred -CCCcEEEEEECCCCeEEEEEEecCCCC--CCCHHHHHHHHHHh--hhhhcCCCeEEeccceeccCC--CCCCceecCCE
Confidence 234567889998889999887654321 12244444443211 112222223333333344442 24667888999
Q ss_pred EEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 335 AFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 335 ~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
+++|||||.++|+.|+|+++||+||..||+.|.+.+..++.... |+.|++.+++. +.+.+...+.+++++
T Consensus 285 ~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~-~~~~~~~~~~~~~~~ 355 (453)
T 3atr_A 285 IVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNE-YGAKQASLDIFRRFL 355 (453)
T ss_dssp EECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHH-THHHHHHHHHHHHHH
T ss_pred EEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998876665344 99999999876 345555555555544
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=2.3e-30 Score=268.00 Aligned_cols=343 Identities=14% Similarity=0.084 Sum_probs=202.2
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhcccccc-CCccccccc
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL-NKLFNTPVI 96 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~-~~~~~~~~~ 96 (561)
....++||+||||||+||++|+.|++. |++|+||||.+.++. ...|..+.+.++..+ ..+.. .........
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~E~~~~~~~-~~~~~~l~~~~~~~l-~~lg~~~~~~~~~~~ 90 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQS------GIDCDVYEAVKEIKP-VGAAISVWPNGVKCM-AHLGMGDIMETFGGP 90 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSCC-----CEEEECHHHHHHH-HHTTCHHHHHHHSCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-cCeeEEECHHHHHHH-HHCCCHHHHHhhcCC
Confidence 345579999999999999999999999 999999999987643 224555666654422 22110 000000000
Q ss_pred hhhhhhhcCC-CCcccCCCCCCc--eeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccc
Q psy14496 97 EERFLFLSSK-KSYKIPSWILPI--CFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNF 173 (561)
Q Consensus 97 ~~~~~~~~~~-~~~~~~~~~~p~--~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~ 173 (561)
...+.+.+.. +.... .+.... .......+.++|..|.+.|.+.+.+ ++|+++++|+++..++++ +.|.+
T Consensus 91 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~--- 162 (407)
T 3rp8_A 91 LRRMAYRDFRSGENMT-QFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWF--- 162 (407)
T ss_dssp CCEEEEEETTTCCEEE-EEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEE---
T ss_pred CcceEEEECCCCCEeE-EecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEE---
Confidence 1112222221 11100 000000 0011347889999999999999876 889999999999876432 33554
Q ss_pred ccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCC
Q psy14496 174 GINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPL 253 (561)
Q Consensus 174 ~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 253 (561)
++|.++++|+||+|||.+|.+|+.+. +.........+ ..+......+... ......+.+.
T Consensus 163 ------------~~g~~~~a~~vV~AdG~~S~vr~~l~---~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~--- 222 (407)
T 3rp8_A 163 ------------TDGSSASGDLLIAADGSHSALRPWVL---GFTPQRRYAGY-VNWNGLVEIDEAL-APGDQWTTFV--- 222 (407)
T ss_dssp ------------TTSCEEEESEEEECCCTTCSSHHHHH---SSCCCCEEEEE-EEEEEEEECCTTT-CCTTEEEEEE---
T ss_pred ------------cCCCEEeeCEEEECCCcChHHHHHhc---CCCCCCcccCc-EEEEEEEeccccc-CCCCceEEEE---
Confidence 34668999999999999999988853 44321111111 1223333333221 1222222220
Q ss_pred CCCCCceEEEEEcCCCeEEEEEEecCCCCCC--CCChHHHHH-Hhhh-ChhHHHhhcCCeeeee-cceeeccCCCccCCe
Q psy14496 254 DYKTYGGGFLYHMENNQISIGYIISLDYKNP--YLSPFEEFQ-RYKT-HPKICKILKGGKRISY-GARTITTGGLQSLPE 328 (561)
Q Consensus 254 ~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~--~~~~~~~~~-~~~~-~p~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 328 (561)
+..+..+++|.+++.+.+.+........+ .....+.+. .+.. .+.+..+++....... .....+. ...++
T Consensus 223 --~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 297 (407)
T 3rp8_A 223 --GEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDI---EPFSR 297 (407)
T ss_dssp --ETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEEC---CCCSC
T ss_pred --CCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEec---CCCCc
Confidence 23345678899888887777664332111 112223333 3332 3455555432211100 0111221 12368
Q ss_pred eecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 329 FIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 329 ~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
|..+|++|+|||||.++|+.|||+|+||+||..||+.|... +.....|+.|++.++.. ....+..++.+..++
T Consensus 298 ~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~ 370 (407)
T 3rp8_A 298 LVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---RDIAAALREYEAQRCDR-VRDLVLKARKRCDIT 370 (407)
T ss_dssp CEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred eecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 88899999999999999999999999999999999999742 22222399999999876 456667777776666
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.97 E-value=4.5e-30 Score=273.11 Aligned_cols=336 Identities=16% Similarity=0.226 Sum_probs=208.7
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccc-------cCCccc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEK-------LNKLFN 92 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~-------~~~~~~ 92 (561)
++++||+|||||||||++|+.|++. |++|+|||+.+.++.. .|..+.+..+..++..+. ......
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liE~~~~~~~~--~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~ 76 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMR------GHRVLLLEREAFPRHQ--IGESLLPATVHGICAMLGLTDEMKRAGFPIK 76 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCCC--SCCBCCHHHHTTHHHHTTCHHHHHTTTCCEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHhC------CCCEEEEccCCCCCCC--CCcccCcchHHHHHHHhCcHHHHHHcCCccc
Confidence 3569999999999999999999999 9999999999865432 344455554332222221 011100
Q ss_pred cccchhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecc
Q psy14496 93 TPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNN 172 (561)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~ 172 (561)
.. ..+.+........+. +...........+.++|..|.+.|.+.+++.|++++++++|+++..+ ++.+.+|.+.+
T Consensus 77 ~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~ 151 (512)
T 3e1t_A 77 RG---GTFRWGKEPEPWTFG-FTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRN 151 (512)
T ss_dssp CE---EEEECSSCSSCEEEE-SSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEEC
T ss_pred cC---ceEEecCCccccccc-cccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEe
Confidence 00 000111100000000 00000111233778999999999999999999999999999999875 56666676632
Q ss_pred cccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCC--CccCCCcEEEEec
Q psy14496 173 FGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINP--KLHKKGLVIHTIG 250 (561)
Q Consensus 173 ~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 250 (561)
.+|+. .+++||+||+|||.+|.++++ ++.+...... ...++...+.... +....+.....+
T Consensus 152 ----~dG~~-------~~i~ad~VI~AdG~~S~vr~~----lg~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~- 214 (512)
T 3e1t_A 152 ----TEGVE-------LMAHARFIVDASGNRTRVSQA----VGERVYSRFF-QNVALYGYFENGKRLPAPRQGNILSAA- 214 (512)
T ss_dssp ----SSSCE-------EEEEEEEEEECCCTTCSSGGG----TCCEEECSTT-CEEEEEEEEESCCCCSTTCTTSEEEEE-
T ss_pred ----CCCCE-------EEEEcCEEEECCCcchHHHHH----cCCCccCchh-cceEEEEEecCCccCCCCCcCceEEEE-
Confidence 12211 379999999999999999887 4543221111 1123333333211 111112222221
Q ss_pred cCCCCCCCceEEEEEcCCCeEEEEEEecCCCCCC-CCChHHHHHHhh-hChhHHHhhcCCeeeeec-ceeecc-CCC-cc
Q psy14496 251 WPLDYKTYGGGFLYHMENNQISIGYIISLDYKNP-YLSPFEEFQRYK-THPKICKILKGGKRISYG-ARTITT-GGL-QS 325 (561)
Q Consensus 251 ~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~-~~~~~~~~~~~~-~~p~~~~~l~~~~~~~~~-~~~~~~-~~~-~~ 325 (561)
...|..|++|..++..+++++...+..+. ...+.+.++.+. .+|.+.+++......... ...++. ..+ ..
T Consensus 215 -----~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~ 289 (512)
T 3e1t_A 215 -----FQDGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYC 289 (512)
T ss_dssp -----ETTEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEE
T ss_pred -----eCCceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeecccccc
Confidence 13456788899988899998875432222 223556666654 568888888766443211 000110 011 02
Q ss_pred CCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhch
Q psy14496 326 LPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYKTSFQASW 390 (561)
Q Consensus 326 ~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~~ 390 (561)
.+++..+|++++|||||+++|+.|+|+++|++||..||+.|...+........ |+.|++.+++.+
T Consensus 290 ~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~ 355 (512)
T 3e1t_A 290 NTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREY 355 (512)
T ss_dssp ESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 34667789999999999999999999999999999999999988754333233 899998887653
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.97 E-value=1e-28 Score=261.01 Aligned_cols=339 Identities=15% Similarity=0.073 Sum_probs=199.0
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
.++++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.+++++.+ ..+.....+.......
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~~~l-~~lGl~~~~~~~~~~~ 79 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA------GVEVVVLERLVERTGE-SRGLGFTARTMEVF-DQRGILPRFGEVETST 79 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCCC-CCC-CCSEEECHHHHHHH-HTTTCGGGGCSCCBCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CCcceECHHHHHHH-HHCCCHHHHHhccccc
Confidence 35679999999999999999999999 9999999999876543 24566777776533 2222000000000000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
...+ ....+.....+. .....+.+++..+.+.|.+.+.+.|++++++++|+++..++++ +.|.+.+. +
T Consensus 80 ~~~~----~~~~~~~~~~~~--~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~----~ 147 (500)
T 2qa1_A 80 QGHF----GGLPIDFGVLEG--AWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--VTVEVRGP----E 147 (500)
T ss_dssp EEEE----TTEEEEGGGSTT--GGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EEEEEEET----T
T ss_pred cccc----cceecccccCCC--CCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EEEEEEcC----C
Confidence 0000 001111000000 0122578999999999999999999999999999999876443 33554321 1
Q ss_pred CceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCC
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTY 258 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 258 (561)
|+ .++++|+||+|||.+|.+|+. +|+..+...... ..+...+..+. .+... +.. . ...
T Consensus 148 g~--------~~~~a~~vVgADG~~S~VR~~----lg~~~~~~~~~~-~~~~~~~~~~~---~~~~~-~~~---~--~~~ 205 (500)
T 2qa1_A 148 GK--------HTLRAAYLVGCDGGRSSVRKA----AGFDFPGTAATM-EMYLADIKGVE---LQPRM-IGE---T--LPG 205 (500)
T ss_dssp EE--------EEEEESEEEECCCTTCHHHHH----TTCCCCEECCCC-EEEEEEEESCC---CCCEE-EEE---E--ETT
T ss_pred CC--------EEEEeCEEEECCCcchHHHHH----cCCCcCCCccce-EEEEEEEEeCC---CCCce-EEE---E--CCC
Confidence 11 379999999999999999887 666543211111 12222222221 12211 111 1 223
Q ss_pred ceEEEEEcCCCeEEEEEEecCCCC---CCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEE
Q psy14496 259 GGGFLYHMENNQISIGYIISLDYK---NPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGA 335 (561)
Q Consensus 259 g~~~~~~~~~~~~~ig~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 335 (561)
+..+++|.+++...+.+....... ....+..+..+.+... +...+...+..... .++. .....++|..+||+
T Consensus 206 g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~--~~~~-~~~~a~~~~~grv~ 280 (500)
T 2qa1_A 206 GMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRL--TGDDIAHAEPVWVS--AFGN-ATRQVTEYRRGRVI 280 (500)
T ss_dssp EEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHH--HSCCCTTSEEEEEE--EEEC-CEEECSCSEETTEE
T ss_pred cEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHh--cCCCCCccceeEEE--Eecc-CcEEccccccCCEE
Confidence 456788988887777665422111 1122333332222210 00001111111110 1111 11234577889999
Q ss_pred EEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 336 FIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 336 lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
|+|||||.++|+.|||+|+||+||..||+.|...+.+......|..|+++++.. ....+..++....++
T Consensus 281 L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~-~~~~~~~s~~~~~l~ 349 (500)
T 2qa1_A 281 LAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAV-GKRLLMNTQAQGLLF 349 (500)
T ss_dssp ECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999886433323399999998864 334444444444333
No 8
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=9.8e-29 Score=261.15 Aligned_cols=338 Identities=13% Similarity=0.061 Sum_probs=199.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
++++||+||||||+||++|+.|++. |++|+||||.+.+... ..+..+++++++.+ ..+.....+........
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~~~l-~~lGl~~~~~~~~~~~~ 81 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG------GVDVMVLEQLPQRTGE-SRGLGFTARTMEVF-DQRGILPAFGPVETSTQ 81 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCSSCCCC-CCSEEECHHHHHHH-HHTTCGGGGCSCCEESE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCC-CceeEECHHHHHHH-HHCCCHHHHHhcccccc
Confidence 4779999999999999999999999 9999999999876543 24567788776533 22220000000000000
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
..+ ....+.....+. .....+.++|..|.+.|.+.+.+.|++|+++++|+++..++++ + .|.+.+. +|
T Consensus 82 ~~~----~~~~~~~~~~~~--~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~----~g 149 (499)
T 2qa2_A 82 GHF----GGRPVDFGVLEG--AHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGP----DG 149 (499)
T ss_dssp EEE----TTEEEEGGGSTT--CCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECS----SC
T ss_pred cee----cceecccccCCC--CCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcC----CC
Confidence 000 001111000010 0112578999999999999999999999999999999886544 2 3555321 11
Q ss_pred ceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCc
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYG 259 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g 259 (561)
+ .++++|+||+|||.+|.+|+. +|+......... ..+...+..+. .+... +.. . ...+
T Consensus 150 ~--------~~~~a~~vVgADG~~S~VR~~----lg~~~~~~~~~~-~~~~~~v~~~~---~~~~~-~~~---~--~~~g 207 (499)
T 2qa2_A 150 P--------RSLTTRYVVGCDGGRSTVRKA----AGFDFPGTSASR-EMFLADIRGCE---ITPRP-IGE---T--VPLG 207 (499)
T ss_dssp E--------EEEEEEEEEECCCTTCHHHHH----TTCCCCEECCCC-CEEEEEEESCC---CCCEE-EEE---E--ETTE
T ss_pred c--------EEEEeCEEEEccCcccHHHHH----cCCCCCCCCCcc-EEEEEEEEECC---CCcce-EEE---E--CCCe
Confidence 1 379999999999999999887 566543211111 12222222221 12211 211 1 2234
Q ss_pred eEEEEEcCCCeEEEEEEecCCCC---CCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEE
Q psy14496 260 GGFLYHMENNQISIGYIISLDYK---NPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAF 336 (561)
Q Consensus 260 ~~~~~~~~~~~~~ig~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 336 (561)
..+++|.+++...+.+....... ....+..+..+.+... +...+...+.... ..++. .....++|..+||+|
T Consensus 208 ~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~--~~~~~-~~~~a~~~~~grv~L 282 (499)
T 2qa2_A 208 MVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRL--TGQDISHGEPVWV--SAFGD-PARQVSAYRRGRVLL 282 (499)
T ss_dssp EEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHH--HSCCCTTCEEEEE--EEECC-CEEECSCSEETTEEE
T ss_pred EEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHH--hCCCCCccceeEE--EEEeC-CcEEcccccCCCEEE
Confidence 56778988777777665422111 1122333333322210 0000111111111 01111 112346778899999
Q ss_pred EecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 337 IGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 337 vGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
+|||||.++|+.|||+|+||+||..||+.|...+.+......|..|+++++.. ....+..++....++
T Consensus 283 ~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~-~~~~~~~s~~~~~l~ 350 (499)
T 2qa2_A 283 AGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPV-GRRLLMNTQAQGMLF 350 (499)
T ss_dssp CGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999886433323399999998864 334444444444443
No 9
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=2.2e-29 Score=261.90 Aligned_cols=329 Identities=17% Similarity=0.156 Sum_probs=202.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccc--cCCcccccc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEK--LNKLFNTPV 95 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~--~~~~~~~~~ 95 (561)
++++||+|||||||||++|+.|++. |++|+|||+.+.++. ..|..+.+..+..+ ++.+. ......
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~------G~~V~v~E~~~~~~~--~~g~~~~~~~~~~l~~~g~~~~~~~~~~~--- 71 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKS------GFKVKIVEKQKFPRF--VIGESLLPRCMEHLDEAGFLDAVKAQGFQ--- 71 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCGGGHHHHHHTTCHHHHHHTTCE---
T ss_pred CccCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC--cccCcccHhHHHHHHHcCChHHHHHcCCc---
Confidence 3569999999999999999999999 999999999986643 24555666554322 11111 000000
Q ss_pred chhhhhhhcCCCCcccCCCCCCce--eecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccc
Q psy14496 96 IEERFLFLSSKKSYKIPSWILPIC--FKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNF 173 (561)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~ 173 (561)
....+.+........++ +... ......+.++|..|.+.|.+.+.+.|++++++++|+++..++++.++.|.+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~- 147 (421)
T 3nix_A 72 QKFGAKFVRGKEIADFN---FSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN- 147 (421)
T ss_dssp EECEEEEEETTEEEEEE---TTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT-
T ss_pred ccCCcEEEeCCeeEEEe---ehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC-
Confidence 00001111110000010 0000 00133788999999999999999999999999999999876555445555532
Q ss_pred ccccCCceecccccCe--EEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEee--CCCccCCCcEEEEe
Q psy14496 174 GINKEGIIKKNFQLGM--ELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTI--NPKLHKKGLVIHTI 249 (561)
Q Consensus 174 ~~~~~g~~~~~f~~g~--~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 249 (561)
|. +++||+||+|||.+|.+++. ++++.+...... ..+...+.. +...+..+.....+
T Consensus 148 --------------g~~~~~~a~~vV~A~G~~s~l~~~----~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (421)
T 3nix_A 148 --------------GNKREIEARFIIDASGYGRVIPRM----FGLDKPSGFESR-RTLFTHIKDVKRPVAAEMEGNRITA 208 (421)
T ss_dssp --------------SCEEEEEEEEEEECCGGGCHHHHH----TTCEECCSSCCC-EEEEEEEECTTCCC----CCSEEEE
T ss_pred --------------CCEEEEEcCEEEECCCCchhhHHh----cCCCCCCcCCCc-EEEEEEECCCcCCCccCCCCeEEEE
Confidence 34 69999999999999988776 565543221111 112111221 11111112111111
Q ss_pred ccCCCCCCCceEEEEEcCCCeEEEEEEecCCCCCC-CCChHHHHHHhh-hChhHHHhhcCCeeeeecceeeccCCCccCC
Q psy14496 250 GWPLDYKTYGGGFLYHMENNQISIGYIISLDYKNP-YLSPFEEFQRYK-THPKICKILKGGKRISYGARTITTGGLQSLP 327 (561)
Q Consensus 250 ~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~-~~~~~~~~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (561)
. + ....+..|++|.+++..+++++...+.... ..++.+.++.+. ..|.+.+.+....... ....++... ...+
T Consensus 209 ~-~--~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~-~~~~ 283 (421)
T 3nix_A 209 V-V--HKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF-EPRTIEGYA-ISAS 283 (421)
T ss_dssp E-E--EETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS-CCEEEECCC-BEES
T ss_pred E-e--CCCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc-Cceeecccc-eeee
Confidence 0 0 123455788899999999998875432221 235666666655 4577777776554331 111222111 1244
Q ss_pred eeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhh
Q psy14496 328 EFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQA 388 (561)
Q Consensus 328 ~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 388 (561)
++..+|++++|||||+++|+.|+|+++|+.+|..+|+.|.+.+.+++. ..+..|++.++.
T Consensus 284 ~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~-~~~~~y~~~~~~ 343 (421)
T 3nix_A 284 KLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEV-NWEKDFVEHMMQ 343 (421)
T ss_dssp CSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHTHHHHHH
T ss_pred eeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCch-hHHHHHHHHHHH
Confidence 667799999999999999999999999999999999999998865432 226677766654
No 10
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.97 E-value=5.3e-29 Score=266.64 Aligned_cols=338 Identities=14% Similarity=0.098 Sum_probs=192.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccc--cCCcccccc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEK--LNKLFNTPV 95 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~--~~~~~~~~~ 95 (561)
.|++||+||||||+||++|+.|++. |++|+||||.+.+... ..+..+.+++++.+ ++.|. ........
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~------G~~V~VlEr~~~~~~~-~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~- 118 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG------GVGALVLEKLVEPVGH-DRAGALHIRTVETLDLRGLLDRFLEGTQVAK- 118 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT------TCCEEEEBSCSSCCCS-SSCCCBCHHHHHHHHTTTCHHHHTTSCCBCS-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEcCCCCCCCC-ceEEEECHHHHHHHHHcCChHHHHhcCcccC-
Confidence 4678999999999999999999999 9999999999876533 24556677665432 12222 00000000
Q ss_pred chhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccccc
Q psy14496 96 IEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGI 175 (561)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~ 175 (561)
.. .+.......+....... .....+.+++..|.+.|.+.+.+.|++|+++++|+++..++++ +.|.+.+
T Consensus 119 --~~--~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v~v~~~~--- 187 (570)
T 3fmw_A 119 --GL--PFAGIFTQGLDFGLVDT--RHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--VEVTVAG--- 187 (570)
T ss_dssp --BC--CBTTBCTTCCBGGGSCC--SCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--EEEEEEE---
T ss_pred --Cc--eeCCcccccccccccCC--CCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--EEEEEEe---
Confidence 00 00000000011000000 1123677999999999999999899999999999999876444 2344411
Q ss_pred ccCCceecccccC-eEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCC
Q psy14496 176 NKEGIIKKNFQLG-MELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254 (561)
Q Consensus 176 ~~~g~~~~~f~~g-~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 254 (561)
.+| .+++||+||+|||.+|.+|+. +|+..+..+... ..+...+..... . .. +.| .
T Consensus 188 ----------~~G~~~~~a~~vV~ADG~~S~vR~~----lGi~~~~~~~~~-~~~~~~v~~~~~---~-~~---~~~--~ 243 (570)
T 3fmw_A 188 ----------PSGPYPVRARYGVGCDGGRSTVRRL----AADRFPGTEATV-RALIGYVTTPER---E-VP---RRW--E 243 (570)
T ss_dssp ----------TTEEEEEEESEEEECSCSSCHHHHH----TTCCCCCCCCCE-EEEEEECCCCSC---S-SC---CCC--C
T ss_pred ----------CCCcEEEEeCEEEEcCCCCchHHHH----cCCCCccceeee-EEEEEEEEecCC---C-cc---eEE--E
Confidence 124 589999999999999999887 666654322211 112111222111 1 11 112 1
Q ss_pred CCCCceEEE-EEcCCCeE-EEEEEecCCC---CCCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCee
Q psy14496 255 YKTYGGGFL-YHMENNQI-SIGYIISLDY---KNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEF 329 (561)
Q Consensus 255 ~~~~g~~~~-~~~~~~~~-~ig~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 329 (561)
....|..++ +|.+++.. ++.+...... .....+..+..+.+...- ...+...+...+ ...++. .....++|
T Consensus 244 ~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~-~~~~~~-~~~~a~~~ 319 (570)
T 3fmw_A 244 RTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVR--GTPLTLTEPVSW-LSRFGD-ASRQAKRY 319 (570)
T ss_dssp CCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSS--SCCCCCCSCCEE-EEEECC-CCEECSCS
T ss_pred ecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHh--hcccccceeeee-eEEeec-cccccccc
Confidence 123344555 68777665 5655443211 111233333333332210 011111111101 011111 12235678
Q ss_pred ecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 330 IFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 330 ~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.+......|+.|+++++.. ....+..++.+..+|
T Consensus 320 ~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~ 394 (570)
T 3fmw_A 320 RSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALM 394 (570)
T ss_dssp EETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHS
T ss_pred ccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 889999999999999999999999999999999999999886433322399999998865 345555555555554
No 11
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.97 E-value=2.1e-29 Score=270.07 Aligned_cols=336 Identities=14% Similarity=0.207 Sum_probs=204.2
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccc--cCCccccc
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEK--LNKLFNTP 94 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~--~~~~~~~~ 94 (561)
+++.+||+|||||||||++|+.|++. |++|+|||+.+.++.. .|..+.+.....+ ++.+. ...... .
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~------G~~V~LiEr~~~~~~~--~G~~l~p~~~~~l~~lGl~~~l~~~~~~-~ 90 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRYR--VGESLLPGTMSILNRLGLQEKIDAQNYV-K 90 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCCC--CCCBCCHHHHHHHHHTTCHHHHHHHCCE-E
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcC------CCCEEEEcCCCCCCCc--eeeeECHHHHHHHHHcCCcHHHHhcCCc-c
Confidence 34469999999999999999999999 9999999999776543 3555666543311 11111 000000 0
Q ss_pred cchhhhhhhcCCCCcccCCCCCCc--eeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecc
Q psy14496 95 VIEERFLFLSSKKSYKIPSWILPI--CFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNN 172 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~ 172 (561)
.....+.+.......... +..+. .......+.++|..|.+.|.+.+++.|++++++++|+++..+ ++.+++|.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~ 168 (591)
T 3i3l_A 91 KPSATFLWGQDQAPWTFS-FAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRR 168 (591)
T ss_dssp ECEEEEECSSSCCCEEEE-CCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEE
T ss_pred cCCcEEEecCCCccceee-cccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEec
Confidence 000000011110000000 00000 001133788999999999999999999999999999999865 45667777742
Q ss_pred cccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCC--ccCCCcEEEEec
Q psy14496 173 FGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPK--LHKKGLVIHTIG 250 (561)
Q Consensus 173 ~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 250 (561)
+|+ ..+++||+||+|||.+|.+++. +++...... ....++...+..... ..........+
T Consensus 169 -----~G~-------~~~i~AdlVV~AdG~~S~lr~~----lg~~~~~~~-~~~~av~~~~~~~~~~~~~~~~~~~~~~- 230 (591)
T 3i3l_A 169 -----GGE-------SVTVESDFVIDAGGSGGPISRK----LGVRQYDEF-YRNFAVWSYFKLKDPFEGDLKGTTYSIT- 230 (591)
T ss_dssp -----TTE-------EEEEEESEEEECCGGGCHHHHH----HTCEEEEEE-EEEEEEEEEEECCCSCCSTTTTCEEEEE-
T ss_pred -----CCc-------eEEEEcCEEEECCCCcchhHHH----cCCCCCCcc-ccceEEEEEEecCccccCCCCCceEEEE-
Confidence 121 1479999999999999998887 444321100 001122222222111 11122222221
Q ss_pred cCCCCCCCceEEEEEcCCCeEEEEEEecCCCCCC--CCChHHHHHHhh-hChhHHHhhcCCeeeeecceeeccCCCccCC
Q psy14496 251 WPLDYKTYGGGFLYHMENNQISIGYIISLDYKNP--YLSPFEEFQRYK-THPKICKILKGGKRISYGARTITTGGLQSLP 327 (561)
Q Consensus 251 ~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~--~~~~~~~~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (561)
...|..|++|..++.+++++....+.... ..+..+.++.+. ..|.+.+.+.....+... +.++.... ..+
T Consensus 231 -----~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~-~~~~~~~~-~~~ 303 (591)
T 3i3l_A 231 -----FEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEV-RIVQDWSY-DTE 303 (591)
T ss_dssp -----ETTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCC-EEEEEEEE-EES
T ss_pred -----cCCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCc-eEeccccc-chh
Confidence 23456788899889999988865432110 012233344443 457777777655433211 11111001 134
Q ss_pred eeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhch
Q psy14496 328 EFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYKTSFQASW 390 (561)
Q Consensus 328 ~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~~ 390 (561)
++..+|++++|||||+++|+.|+|+++|+.||..||+.|.+.+..++.... ++.|++.++..+
T Consensus 304 ~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~ 367 (591)
T 3i3l_A 304 VFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAY 367 (591)
T ss_dssp CSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred hcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 677799999999999999999999999999999999999998875544344 889998887653
No 12
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.97 E-value=1.3e-28 Score=268.42 Aligned_cols=357 Identities=14% Similarity=0.144 Sum_probs=200.3
Q ss_pred CcccEEEECchhHHHHHHHHHHh-----ccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhcccccc-CCccccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQ-----LAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL-NKLFNTP 94 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~-----~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~-~~~~~~~ 94 (561)
+++||+||||||+||++|+.|++ . |++|+||||.+.+... ..+..+.+++++-+ ..+.. .......
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~------Gi~v~viE~~~~~~~~-gra~~l~~~tle~l-~~lGl~~~l~~~~ 78 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP------DLKVRIIDKRSTKVYN-GQADGLQCRTLESL-KNLGLADKILSEA 78 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST------TCCEEEECSSSSCCCS-CSCCEECHHHHHHH-HTTTCHHHHHTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC------CCCEEEEeCCCCCCCC-CceeEEChHHHHHH-HHCCCHHHHHHhc
Confidence 46899999999999999999999 8 9999999998765432 23456777776533 22220 0000000
Q ss_pred cchhhhhhhcCC--CCcccC-CC-CCCceeecCCcEEeeHHHHHHHHHHHHHHCC---CEEEcCceEeEEEEcC------
Q psy14496 95 VIEERFLFLSSK--KSYKIP-SW-ILPICFKNHGNYIISLSDLVRWMGKKAENMG---IDIFSGFSASEILYDS------ 161 (561)
Q Consensus 95 ~~~~~~~~~~~~--~~~~~~-~~-~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~g---v~i~~g~~v~~i~~~~------ 161 (561)
.....+.++... +.+... .. ...........+.++|..|++.|.+.+.+.| ++++++++|+++..++
T Consensus 79 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~ 158 (665)
T 1pn0_A 79 NDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDP 158 (665)
T ss_dssp BCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCT
T ss_pred cccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccC
Confidence 001111122111 111100 00 0000111233678999999999999998876 9999999999998764
Q ss_pred CCCEEEEEecccc-----------cccCCceeccc----------------ccC--eEEecCEEEEccCCCchhhHHHHH
Q psy14496 162 KNNVCGIATNNFG-----------INKEGIIKKNF----------------QLG--MELYAKYTLFAEGSRGHLSKQIIK 212 (561)
Q Consensus 162 ~g~v~~V~~~~~~-----------~~~~g~~~~~f----------------~~g--~~i~ad~vV~AdG~~s~~~~~l~~ 212 (561)
++..+.|.+.+.. ...+|....++ .+| .+++||+||+|||++|.+|+.
T Consensus 159 ~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~--- 235 (665)
T 1pn0_A 159 EAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRT--- 235 (665)
T ss_dssp TCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHH---
T ss_pred CCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHh---
Confidence 1222445443210 00111111111 234 579999999999999999988
Q ss_pred HcCCCCCCCCccccceeEEEEeeCCCccCC-CcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEecCCC------CCCC
Q psy14496 213 KFNLDNKKDPQTYSLGIKELWTINPKLHKK-GLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISLDY------KNPY 285 (561)
Q Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~~------~~~~ 285 (561)
+|+...........++..+..... +.. ...... + ....+..+++|.+++.+.+.+...... ....
T Consensus 236 -lg~~~~g~~~~~~~~v~d~~~~~~--~p~~~~~~~~--~---~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~ 307 (665)
T 1pn0_A 236 -LGFEMIGEQTDYIWGVLDAVPASN--FPDIRSRCAI--H---SAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTK 307 (665)
T ss_dssp -HTCCCEEEEEEEEEEEEEEEEECC--CTTTTSEEEE--E---CSSSCEEEEEECSTTCEEEEEEECC----------CC
T ss_pred -cCCCCCCCCccEEEEEEEEEECCC--CCCcceEEEE--E---eCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCC
Confidence 455432111111112222111111 111 111111 1 012455678898888777766554321 1112
Q ss_pred CChHHHHHHhhhChhHHHhhcC--C--eeeeecceeeccCCCccCCeee-cCCEEEEecCCccCCCcccccchHHHHHHH
Q psy14496 286 LSPFEEFQRYKTHPKICKILKG--G--KRISYGARTITTGGLQSLPEFI-FDGGAFIGCNAGFMNVSRIKGIHTSIKSGI 360 (561)
Q Consensus 286 ~~~~~~~~~~~~~p~~~~~l~~--~--~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~ 360 (561)
.++.+..+.+. ..+.. . +.+.+.. .++ .+....++|. .+||+|+|||||.++|+.|||+|+||+||.
T Consensus 308 ~t~e~~~~~~~------~~~~~~~~~~~~~~~~~-~~~-~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~ 379 (665)
T 1pn0_A 308 FTPEVVIANAK------KIFHPYTFDVQQLDWFT-AYH-IGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTY 379 (665)
T ss_dssp CCHHHHHHHHH------HHHTTSCCEEEEEEEEE-EEE-EEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHH------HHhCcccCceeeEEEEE-eee-ccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHH
Confidence 33333333221 11211 0 1111110 111 1112345777 699999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 361 LVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 361 ~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
.||+.|+..+.+......|+.|+++|+.. ....+..++.+.++|
T Consensus 380 nLawkLa~vl~g~a~~~lL~tYe~eR~p~-a~~~i~~s~~~~~l~ 423 (665)
T 1pn0_A 380 NLGWKLGLVLTGRAKRDILKTYEEERQPF-AQALIDFDHQFSRLF 423 (665)
T ss_dssp HHHHHHHHHHTTCBCGGGGHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 99999999886433323399999999865 344455555555544
No 13
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.96 E-value=2e-29 Score=261.12 Aligned_cols=329 Identities=16% Similarity=0.131 Sum_probs=174.9
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ecceeChhhHHhhccccc-cCC--ccc--cccc
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SGAIIDPRSIFELFPKEK-LNK--LFN--TPVI 96 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G~~~~~~~l~~l~~~~~-~~~--~~~--~~~~ 96 (561)
.+|+|||||||||++|+.|++. |++|+||||.+.+..... .|..+.+.++..+ ..+. ... .+. ....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L-~~lg~~~~~~~~~~~~~~~ 74 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERNSAASSILPGYGIHINSFGKQAL-QECLPAENWLAFEEASRYI 74 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHH-HHHSCHHHHHHHHHHCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHH-HHcCChHHHHHhhhhhccc
Confidence 4799999999999999999999 999999999987654321 2234566654422 1111 000 000 0000
Q ss_pred hhhhhhhcCCCCcccC-CCC--CCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccc
Q psy14496 97 EERFLFLSSKKSYKIP-SWI--LPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNF 173 (561)
Q Consensus 97 ~~~~~~~~~~~~~~~~-~~~--~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~ 173 (561)
.....+.......... ... ..........+.++|..|.+.|.+.+ +..|++++++++++..+++.+ .|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v-~v~---- 146 (412)
T 4hb9_A 75 GGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGI-KIF---- 146 (412)
T ss_dssp CCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCE-EEE----
T ss_pred CcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeE-EEE----
Confidence 0000011111110000 000 00011112356799999999998754 456899999999987655543 343
Q ss_pred ccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCC-------CccCCCcEE
Q psy14496 174 GINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINP-------KLHKKGLVI 246 (561)
Q Consensus 174 ~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 246 (561)
|++|.+++||+||+|||.+|.+|+.+. .........+ ..+.......+ ..+..+...
T Consensus 147 -----------~~dG~~~~adlvVgADG~~S~vR~~l~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (412)
T 4hb9_A 147 -----------FADGSHENVDVLVGADGSNSKVRKQYL----PFIERFDVGV-SMIIGRARLTPALTALLPQNFRDGTPN 210 (412)
T ss_dssp -----------ETTSCEEEESEEEECCCTTCHHHHHHS----TTCCCEEEEE-EEEEEEEECCHHHHHHSCGGGTSSCCE
T ss_pred -----------ECCCCEEEeeEEEECCCCCcchHHHhC----CCccccccce-eEEEEEEecchhhhcchhhhhccCCcc
Confidence 456789999999999999999998853 2221111111 11111111111 001111110
Q ss_pred EEeccCCCCCCCceEE----EEEc----------CCCeEEEEEEecCC-CCC--CCCChHHHHH----Hhh-hChhHHHh
Q psy14496 247 HTIGWPLDYKTYGGGF----LYHM----------ENNQISIGYIISLD-YKN--PYLSPFEEFQ----RYK-THPKICKI 304 (561)
Q Consensus 247 ~~~~~p~~~~~~g~~~----~~~~----------~~~~~~ig~~~~~~-~~~--~~~~~~~~~~----~~~-~~p~~~~~ 304 (561)
.. .|. ..+..+ ..|. .++..........+ ..+ .........+ .+. .+|.+..+
T Consensus 211 ~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l 285 (412)
T 4hb9_A 211 SI--VPK---SPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTL 285 (412)
T ss_dssp EE--CCS---SSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHH
T ss_pred eE--eec---CCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHH
Confidence 10 000 001100 1111 00111111111111 111 1122222222 222 24677777
Q ss_pred hcCCeeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccc-hhhHH
Q psy14496 305 LKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK-LITYK 383 (561)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~ 383 (561)
++.............. ....++|..+||+|+|||||.++|+.|||+|+||+||..||+.|...+........ |+.|+
T Consensus 286 i~~~~~~~~~~~~~~~--~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye 363 (412)
T 4hb9_A 286 VQQSDMENISPLHLRS--MPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYE 363 (412)
T ss_dssp HHTSCTTCCEEEEEEE--CCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHhcccceeccchhcc--ccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 6543222111111111 12345788899999999999999999999999999999999999998765443233 99999
Q ss_pred HHHhhc
Q psy14496 384 TSFQAS 389 (561)
Q Consensus 384 ~~~~~~ 389 (561)
+++++.
T Consensus 364 ~~R~~~ 369 (412)
T 4hb9_A 364 QQMRAY 369 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
No 14
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=1.1e-28 Score=264.34 Aligned_cols=329 Identities=14% Similarity=0.083 Sum_probs=190.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccc----cCCcccc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEK----LNKLFNT 93 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~----~~~~~~~ 93 (561)
++++||+||||||+||++|+.|++. |++|+||||.+.++... .+..+.+++++.+ ++.+. .+.+...
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~------G~~v~viEr~~~~~~~~-~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQ------GVRVLVVERRPGLSPYP-RAAGQNPRTMELLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSSSCCCCC-CSCCBCHHHHHHHHHTTCHHHHHHSCCSSCT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCCC-ccceECHHHHHHHHHcCCHHHHHhhCCCccc
Confidence 4679999999999999999999999 99999999998765432 4556777765432 11111 1111100
Q ss_pred ccchhhhh--hhcCCCCcccC----CCCC----CceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCC
Q psy14496 94 PVIEERFL--FLSSKKSYKIP----SWIL----PICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKN 163 (561)
Q Consensus 94 ~~~~~~~~--~~~~~~~~~~~----~~~~----p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g 163 (561)
. ..+. +........+. .+.. .........+.++|..|.+.|.+.+.+.|++++++++|+++..++++
T Consensus 76 ~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~ 152 (535)
T 3ihg_A 76 Q---GDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDD 152 (535)
T ss_dssp T---SCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGG
T ss_pred c---cceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCC
Confidence 0 0000 00000000000 0000 00011223667999999999999999999999999999999886542
Q ss_pred C--EEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccC
Q psy14496 164 N--VCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK 241 (561)
Q Consensus 164 ~--v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (561)
. .+.|.+.+. +| ..+++||+||+|||.+|.+|+. +|+.....+. ....+...+........
T Consensus 153 ~~~~v~v~~~~~----~~--------~~~i~a~~vV~AdG~~S~vR~~----lgi~~~~~~~-~~~~~~~~~~~~~~~~~ 215 (535)
T 3ihg_A 153 AGAGVTARLAGP----DG--------EYDLRAGYLVGADGNRSLVRES----LGIGRYGHGT-LTHMVGVIFDADLSGIM 215 (535)
T ss_dssp GCSEEEEEEEET----TE--------EEEEEEEEEEECCCTTCHHHHH----TTCCEEEEEE-EEEEEEEEEECCGGGTS
T ss_pred ccccEEEEEEcC----CC--------eEEEEeCEEEECCCCcchHHHH----cCCCcCCCCc-cceEEEEEEeccChhhc
Confidence 2 233444221 11 1589999999999999999888 6665422111 10111111221111111
Q ss_pred --CCcEEEEeccCCCCCCCceEEEEEcCC-CeEEEEEEecCCCC--CCCCChHHHHHHhhhChhHHHhhcC----Ceeee
Q psy14496 242 --KGLVIHTIGWPLDYKTYGGGFLYHMEN-NQISIGYIISLDYK--NPYLSPFEEFQRYKTHPKICKILKG----GKRIS 312 (561)
Q Consensus 242 --~~~~~~~~~~p~~~~~~g~~~~~~~~~-~~~~ig~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~l~~----~~~~~ 312 (561)
.....+.+ . ...+..+++|..+ +.+.+.+....+.. .+..+..+..+.+ ...+.. .+...
T Consensus 216 ~~~~~~~~~~---~--~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l------~~~~~~~~~~~~~~~ 284 (535)
T 3ihg_A 216 EPGTTGWYYL---H--HPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELI------GLALDAPEVKPELVD 284 (535)
T ss_dssp CTTCCEEEEE---E--CSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHH------HHHHTCSSCCCEEEE
T ss_pred cCCceEEEEE---E--CCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHH------HHHhCCCCCceeEEE
Confidence 11121221 1 2233456777754 55555554433221 1122222222222 122210 11111
Q ss_pred ecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhc
Q psy14496 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQAS 389 (561)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~ 389 (561)
.....+. ....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...+++......|+.|+++|+..
T Consensus 285 ~~~~~~~---~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~ 358 (535)
T 3ihg_A 285 IQGWEMA---ARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA 358 (535)
T ss_dssp EEEEEEE---EEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH
T ss_pred eeEeeee---EEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH
Confidence 1111111 1224577889999999999999999999999999999999999999886544333399999999865
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.96 E-value=1.6e-28 Score=253.04 Aligned_cols=336 Identities=14% Similarity=0.116 Sum_probs=187.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC--CceeecceeChhhHHhhccccccCCcc-ccccch
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG--AHILSGAIIDPRSIFELFPKEKLNKLF-NTPVIE 97 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g--~~~~~G~~~~~~~l~~l~~~~~~~~~~-~~~~~~ 97 (561)
|++||+||||||+||++|+.|++. |++|+||||.+.+. ... .++.+.+.++..+ ..+.....+ ......
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~-~~g~l~~~~~~~l-~~lg~~~~~~~~~~~~ 72 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKA------GIDNVILERQTPDYVLGRI-RAGVLEQGMVDLL-REAGVDRRMARDGLVH 72 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHH------TCCEEEECSSCHHHHHTCC-CCCEECHHHHHHH-HHTTCCHHHHHHCEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCcccCCC-ceEeECHHHHHHH-HHcCCcHHHHhcCCcc
Confidence 568999999999999999999999 99999999987531 112 2334666654322 222100000 000000
Q ss_pred hhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccccccc
Q psy14496 98 ERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINK 177 (561)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~ 177 (561)
..+.+........++ ++........+.+.+..+.+.|.+.+.+.|++++++++|+++..++++. +.|.+.
T Consensus 73 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~------ 142 (394)
T 1k0i_A 73 EGVEIAFAGQRRRID---LKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFE------ 142 (394)
T ss_dssp SCEEEEETTEEEEEC---HHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEE------
T ss_pred ceEEEEECCceEEec---cccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEe------
Confidence 111111111101111 1000001236678899999999999988999999999999998653332 334441
Q ss_pred CCceecccccCe--EEecCEEEEccCCCchhhHHHHHHcCCCCCCC-CccccceeEEEEe-eCCCccCCCcEEEEeccCC
Q psy14496 178 EGIIKKNFQLGM--ELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKD-PQTYSLGIKELWT-INPKLHKKGLVIHTIGWPL 253 (561)
Q Consensus 178 ~g~~~~~f~~g~--~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~ 253 (561)
.+|. ++++|+||+|||.+|.+|+. ++...... ...+...+..+.. .+.. .+... +. .
T Consensus 143 --------~~g~~~~~~a~~vV~AdG~~S~vr~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~----~ 203 (394)
T 1k0i_A 143 --------RDGERLRLDCDYIAGCDGFHGISRQS----IPAERLKVFERVYPFGWLGLLADTPPV--SHELI-YA----N 203 (394)
T ss_dssp --------ETTEEEEEECSEEEECCCTTCSTGGG----SCGGGCEEEEEEEEEEEEEEEESSCCS--CSSCE-EE----C
T ss_pred --------cCCcEEEEEeCEEEECCCCCcHHHHh----cCccccccccccccceeEEEecCCCCC--ccceE-EE----E
Confidence 1244 69999999999999999887 44321100 0111111111111 1111 11111 11 1
Q ss_pred CCCCCceEEEEEcCCCeEEEEEEecCCCCCCCCChHHHHHHhhhC--hhHHHhhcCCeeeeecceeeccCCCccCCeeec
Q psy14496 254 DYKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTH--PKICKILKGGKRISYGARTITTGGLQSLPEFIF 331 (561)
Q Consensus 254 ~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (561)
...+..|+.+.+++...+.+...........+..+..+.+... +.+...+........ ...+...+ ..++|..
T Consensus 204 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ 278 (394)
T 1k0i_A 204 --HPRGFALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSF-VVEPMQH 278 (394)
T ss_dssp --CTTCCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEE-EEECSEE
T ss_pred --cCCceEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhh-hcccccc
Confidence 1223345556566666666654432111112333333333211 112212222222111 11111111 1345677
Q ss_pred CCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhc
Q psy14496 332 DGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARN 400 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~ 400 (561)
+|++|+|||||.++|+.|||+|+||+||..||+.|...+..+. ...|+.|+++++.. +...+..++.
T Consensus 279 grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~-~~~L~~Y~~~r~~~-~~~~~~~s~~ 345 (394)
T 1k0i_A 279 GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGR-GELLERYSAICLRR-IWKAERFSWW 345 (394)
T ss_dssp TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCC-GGGGGGHHHHHHHH-HHHHHHHHHH
T ss_pred CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCc-hHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999998775432 23499999988765 3344444443
No 16
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.96 E-value=1.1e-27 Score=260.87 Aligned_cols=349 Identities=12% Similarity=0.116 Sum_probs=196.1
Q ss_pred CcccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhcccccc-CCccccccchh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL-NKLFNTPVIEE 98 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~-~~~~~~~~~~~ 98 (561)
.++||+||||||+||++|+.|++ . |++|+||||.+.+... ..+..+.+++++.+ ..+.. ...........
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~------G~~V~viEr~~~~~~~-g~a~~l~~~t~e~l-~~lGl~~~~~~~~~~~~ 102 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP------DIRTCIVEQKEGPMEL-GQADGIACRTMEMF-EAFEFADSILKEACWIN 102 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT------TSCEEEECSSSSCCSS-CSCCEECHHHHHHH-HHTTCHHHHHHHSEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC------CCCEEEEeCCCCCCCC-CceeeeCHHHHHHH-HHcCcHHHHHHhccccc
Confidence 46899999999999999999999 9 9999999999876442 24556777765432 22210 00000000001
Q ss_pred hhhhhcC----CCCcccC-CCC-CCceeecCCcEEeeHHHHHHHHHHHHHHCCC--EEEcCceEeEEEEcCC--CCEEEE
Q psy14496 99 RFLFLSS----KKSYKIP-SWI-LPICFKNHGNYIISLSDLVRWMGKKAENMGI--DIFSGFSASEILYDSK--NNVCGI 168 (561)
Q Consensus 99 ~~~~~~~----~~~~~~~-~~~-~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv--~i~~g~~v~~i~~~~~--g~v~~V 168 (561)
.+.++.. .+.+... ... ..........+.+++..+.+.|.+.+.+.|+ +|+++++|+++..+++ +..+.|
T Consensus 103 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v 182 (639)
T 2dkh_A 103 DVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTV 182 (639)
T ss_dssp EEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEE
T ss_pred ceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEE
Confidence 1111111 0111000 000 0000111235679999999999999999877 9999999999988643 223445
Q ss_pred EecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEe-eCCCccCCCcEEE
Q psy14496 169 ATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWT-INPKLHKKGLVIH 247 (561)
Q Consensus 169 ~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (561)
.+.+.+...+|. ..+++||+||+|||.+|.+|+. +|+...........++..... ...+.......++
T Consensus 183 ~~~~~~~~~~G~-------~~~i~a~~vVgADG~~S~vR~~----lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 251 (639)
T 2dkh_A 183 TLERCDAAHAGQ-------IETVQARYVVGCDGARSNVRRA----IGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQ 251 (639)
T ss_dssp EEEECSGGGTTC-------EEEEEEEEEEECCCTTCHHHHH----TTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEE
T ss_pred EEEeccccCCCC-------eEEEEeCEEEECCCcchHHHHH----hCCCCCCCCccceEEEEEEEEccCCCccceeEEEE
Confidence 543200001221 1479999999999999999887 565542211111122222211 1111111111111
Q ss_pred EeccCCCCCCCceEEEEEcCCC-eEEEEEEecC--CC---CCCCCChHHHHHHhhhChhHHHhhcC-C---eeeeeccee
Q psy14496 248 TIGWPLDYKTYGGGFLYHMENN-QISIGYIISL--DY---KNPYLSPFEEFQRYKTHPKICKILKG-G---KRISYGART 317 (561)
Q Consensus 248 ~~~~p~~~~~~g~~~~~~~~~~-~~~ig~~~~~--~~---~~~~~~~~~~~~~~~~~p~~~~~l~~-~---~~~~~~~~~ 317 (561)
. ..+..+++|.+++ .+.+.+.... +. .....+..+..+.+ ...+.. . +.+.+. .
T Consensus 252 ~--------~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~~~~~~~~~--~ 315 (639)
T 2dkh_A 252 S--------EQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATA------QRVLHPYKLEVKNVPWW--S 315 (639)
T ss_dssp E--------TTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHH------HHHHTTSCEEEEEEEEE--E
T ss_pred c--------CCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHH------HHHhCcccCcceeeeEE--E
Confidence 1 2345677898776 6666555432 11 11122333322222 122211 0 111111 1
Q ss_pred eccCCCccCCeee------------cCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHH
Q psy14496 318 ITTGGLQSLPEFI------------FDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTS 385 (561)
Q Consensus 318 ~~~~~~~~~~~~~------------~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~ 385 (561)
....+....++|. .+||+|+|||||.++|+.|||+|+||+||..||+.|+..+.+......|+.|+++
T Consensus 316 ~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~e 395 (639)
T 2dkh_A 316 VYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSE 395 (639)
T ss_dssp EECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHH
T ss_pred ecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 1111111233444 7999999999999999999999999999999999999988643332349999999
Q ss_pred HhhchhhHhhhhhhccchhh
Q psy14496 386 FQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~ 405 (561)
|+.. ....+..++.+..++
T Consensus 396 R~~~-a~~~~~~s~~~~~~~ 414 (639)
T 2dkh_A 396 RQVV-AQQLIDFDREWAKMF 414 (639)
T ss_dssp HHHH-HHHHHHHHHHSCC--
T ss_pred HHHH-HHHHHHHHHHHHHHh
Confidence 9865 445555556555555
No 17
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1.4e-28 Score=253.98 Aligned_cols=338 Identities=12% Similarity=0.054 Sum_probs=197.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccccCCccccccchh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~~~~~~~~~~~~~ 98 (561)
.++||+||||||+||++|+.|++. |++|+||||.+.+.. ...+..+.+..+..+ ++.+.. .........
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~V~viE~~~~~~~-~~~~~~l~~~~~~~l~~~g~~~~--~~~~~~~~~ 75 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ------GHRVVVVEQARRERA-INGADLLKPAGIRVVEAAGLLAE--VTRRGGRVR 75 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCCC----CCCCEECHHHHHHHHHTTCHHH--HHHTTCEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCCc-cCceeeECchHHHHHHHcCcHHH--HHHhCCCcc
Confidence 458999999999999999999999 999999999876532 224556666554322 111110 000000001
Q ss_pred hhhhhcCCCC--cccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEE-EEEecccc
Q psy14496 99 RFLFLSSKKS--YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVC-GIATNNFG 174 (561)
Q Consensus 99 ~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~-~V~~~~~~ 174 (561)
.+.+....+. ..++..... .....+.++|..|.+.|.+.+.+. |++++++++|+++..+++ .++ .|++.
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~--- 148 (399)
T 2x3n_A 76 HELEVYHDGELLRYFNYSSVD---ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLN--- 148 (399)
T ss_dssp CEEEEEETTEEEEEEETTSSC---GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEET---
T ss_pred eeEEEeCCCCEEEecchHHhc---ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEEC---
Confidence 1111111110 011100000 012257899999999999999887 999999999999987644 332 45553
Q ss_pred cccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCC-Ccccc---ceeEEEEeeCCCccCCCcEEEEec
Q psy14496 175 INKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKD-PQTYS---LGIKELWTINPKLHKKGLVIHTIG 250 (561)
Q Consensus 175 ~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 250 (561)
+|.++++|+||+|||.+|.+|+. ++...... | .+. .++...+..+ . +... ..+
T Consensus 149 ------------~g~~~~ad~vV~AdG~~s~vr~~----lg~~~~~~~p-~~~~~~~~~~~~~~~~---~-~~~~-~~~- 205 (399)
T 2x3n_A 149 ------------DGRVLRPRVVVGADGIASYVRRR----LLDIDVERRP-YPSPMLVGTFALAPCV---A-ERNR-LYV- 205 (399)
T ss_dssp ------------TSCEEEEEEEEECCCTTCHHHHH----TSCCCCCCCC-CSSCEEEEEEECCHHH---H-HCEE-EEE-
T ss_pred ------------CCCEEECCEEEECCCCChHHHHH----hCCCccccCC-CCCCceEEEEEEecCC---C-CCcc-EEE-
Confidence 35689999999999999999876 56543221 0 111 1222111111 1 1112 221
Q ss_pred cCCCCCC-CceEEEEEcCCCeEEEEEEecCCCC---CCCCChHHHHHHhhh-ChhHH-HhhcCCeeeeecceeeccCCCc
Q psy14496 251 WPLDYKT-YGGGFLYHMENNQISIGYIISLDYK---NPYLSPFEEFQRYKT-HPKIC-KILKGGKRISYGARTITTGGLQ 324 (561)
Q Consensus 251 ~p~~~~~-~g~~~~~~~~~~~~~ig~~~~~~~~---~~~~~~~~~~~~~~~-~p~~~-~~l~~~~~~~~~~~~~~~~~~~ 324 (561)
.. .+..+++|.++..+.+.+....+.. ....+..+..+.+.. .+.+. ..++....- .....+.....
T Consensus 206 -----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 278 (399)
T 2x3n_A 206 -----DSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGT--SRFKGIPIGYL 278 (399)
T ss_dssp -----CTTSCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCS--TTCEECCCCCE
T ss_pred -----cCCCcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCcc--ceEEechhhcc
Confidence 22 4456778887766655543221100 000112222223322 12221 112111100 00112221112
Q ss_pred cCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcC-CCccchhhHHHHHhhchhhHhhhhhhccch
Q psy14496 325 SLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSN-NKFNKLITYKTSFQASWLYKELYKARNFKP 403 (561)
Q Consensus 325 ~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~-~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~ 403 (561)
..++|..+|++|+|||||.++|+.|||+|+||+||..||+.|.+.+..+ +....|+.|+++++.. ....+..++.+.+
T Consensus 279 ~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~ 357 (399)
T 2x3n_A 279 NLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPV-NQAIVSYGHALAT 357 (399)
T ss_dssp ECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccH-HHHHHHHHHHhhh
Confidence 3567888999999999999999999999999999999999999887643 3323399999999876 4566666666666
Q ss_pred hh
Q psy14496 404 AM 405 (561)
Q Consensus 404 ~~ 405 (561)
++
T Consensus 358 ~~ 359 (399)
T 2x3n_A 358 SL 359 (399)
T ss_dssp HT
T ss_pred hh
Confidence 66
No 18
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.96 E-value=3e-28 Score=249.57 Aligned_cols=317 Identities=16% Similarity=0.124 Sum_probs=185.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccc-cCCccccccchhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEK-LNKLFNTPVIEER 99 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~ 99 (561)
..+||+||||||+||++|+.|++. |++|+|||+.+.++.. ..|..+.+..+..+ ..+. .............
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~v~viE~~~~~~~~-~~~~~l~~~~~~~l-~~~g~~~~~~~~~~~~~~ 81 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQN------GWDVRLHEKSSELRAF-GAGIYLWHNGLRVL-EGLGALDDVLQGSHTPPT 81 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSCCCC-SSEEEEEHHHHHHH-HHTTCHHHHHTTCBCCSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCCC-CceEEeCccHHHHH-HHcCCHHHHHhhCCCccc
Confidence 358999999999999999999999 9999999999877542 23444555554322 1111 0000000001111
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
+.+... +. .+.....+ +...+.++|..|.+.|.+.+.+.|++++++++|+++.. ++ .|.+.
T Consensus 82 ~~~~~~-g~-~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~-------- 142 (379)
T 3alj_A 82 YETWMH-NK-SVSKETFN----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQ-------- 142 (379)
T ss_dssp EEEEET-TE-EEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEET--------
T ss_pred eEEEeC-Cc-eeeeccCC----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEEC--------
Confidence 222222 11 11000000 12368899999999999999999999999999999975 33 34442
Q ss_pred ceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCcccc-ceeEEEEeeCC---CccCCCcEEEEeccCCCC
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYS-LGIKELWTINP---KLHKKGLVIHTIGWPLDY 255 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~ 255 (561)
+|.++++|+||+|||.+|.+++.+ +.... +...+ ..+........ ....+....+.+.| .
T Consensus 143 -------~g~~~~ad~vV~AdG~~s~vr~~l----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 206 (379)
T 3alj_A 143 -------TGEVLEADLIVGADGVGSKVRDSI----GFKQD--RWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF-W-- 206 (379)
T ss_dssp -------TSCEEECSEEEECCCTTCHHHHHH----CCCEE--EEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC-S--
T ss_pred -------CCCEEEcCEEEECCCccHHHHHHh----cCCCC--cCcCCcEEEEEEechhhccCCcCCcccccccceE-E--
Confidence 356899999999999999998873 33211 11111 11222222210 11112223332211 1
Q ss_pred CCCceEEEEEcCCCeEEEEEEecCCCCCCCCChHHHHHHhh-hChhHHHhhcCC---eeeeecceeeccCCCccCCeeec
Q psy14496 256 KTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYK-THPKICKILKGG---KRISYGARTITTGGLQSLPEFIF 331 (561)
Q Consensus 256 ~~~g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~ 331 (561)
+..+..|++|.+++...+.+....+...+ ....+.+..+. ..+.+.+++... ....+. +.. ....++|..
T Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~--~~~~~~~~~ 280 (379)
T 3alj_A 207 PRVQRILYSPCNENELYLGLMAPAADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYD---KYE--TTKLDSWTR 280 (379)
T ss_dssp SSCCEEEEEECSSSEEEEEEEECTTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEE---EEE--EEEESCSEE
T ss_pred CCCCEEEEEECCCCcEEEEEEecCCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEEec---ccc--cCCCCCccc
Confidence 23445678899888877766654321111 11112222221 122111222211 111111 000 112457778
Q ss_pred CCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhc
Q psy14496 332 DGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQAS 389 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~ 389 (561)
+|++|+|||||.++|+.|||+|+||+||..||+.|... .+....|+.|+++++..
T Consensus 281 ~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~---~~~~~~l~~Y~~~r~~~ 335 (379)
T 3alj_A 281 GKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG---SSVEDALVAWETRIRPI 335 (379)
T ss_dssp TTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS---SCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc---cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988641 23222399999988865
No 19
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=2.6e-27 Score=245.15 Aligned_cols=329 Identities=16% Similarity=0.151 Sum_probs=183.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCc-EEEEcCCCCCCCceeecceeChhhHHhhcccccc-CCccccccchh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIK-ICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL-NKLFNTPVIEE 98 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~-V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~-~~~~~~~~~~~ 98 (561)
..+||+||||||+||++|+.|++. |++ |+||||.+.++.. ..|..+.+..+..+ ..+.. ...........
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~~v~v~E~~~~~~~~-g~g~~l~~~~~~~l-~~lg~~~~l~~~~~~~~ 74 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA------GIGKVTLLESSSEIRPL-GVGINIQPAAVEAL-AELGLGPALAATAIPTH 74 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESSSSCCCC-SCEEEECHHHHHHH-HHTTCHHHHHHHSEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCCcccc-eeEEEEChHHHHHH-HHCCChHHHHhhCCCcc
Confidence 358999999999999999999999 999 9999999876432 23455666654422 11110 00000000011
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CC-CEEEcCceEeEEEEcCCCCEEEEEecccccc
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MG-IDIFSGFSASEILYDSKNNVCGIATNNFGIN 176 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~g-v~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~ 176 (561)
.+.+.+..+..................+.++|..|.+.|.+.+.+ .| ++++++++|+++.. +++ +.|.+.+.
T Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~--- 148 (410)
T 3c96_A 75 ELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARD--- 148 (410)
T ss_dssp EEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEE---
T ss_pred eEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecC---
Confidence 111222111111000000000011225789999999999999976 46 68999999999987 444 23444210
Q ss_pred cCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccc-c-ceeEEEEeeCCCccCCCcEEEEeccCCC
Q psy14496 177 KEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTY-S-LGIKELWTINPKLHKKGLVIHTIGWPLD 254 (561)
Q Consensus 177 ~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 254 (561)
.+|+. .++++|+||+|||.+|.+|+.+ +.... ...+ + ..+......++ ...+.....++.
T Consensus 149 ~~g~~-------~~~~ad~vV~AdG~~S~vR~~l----~~~~~--~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~--- 210 (410)
T 3c96_A 149 GHGKP-------QALGADVLVGADGIHSAVRAHL----HPDQR--PLSHGGITMWRGVTEFDR--FLDGKTMIVAND--- 210 (410)
T ss_dssp TTSCE-------EEEEESEEEECCCTTCHHHHHH----CTTCC--CCEEEEEEEEEEEEEESC--CTTSSEEEEEEC---
T ss_pred CCCCc-------eEEecCEEEECCCccchhHHHh----cCCCC--CCCcCCeeEEEeeccccc--ccCCCeEEEecC---
Confidence 01210 4799999999999999998875 22211 1112 1 11112222221 222333222221
Q ss_pred CCCCceEEEEEcCC-----CeEEEEEEec--C---------CCCCCCCChHHHHHHhhhC----hhHHHhhcCCeeeeec
Q psy14496 255 YKTYGGGFLYHMEN-----NQISIGYIIS--L---------DYKNPYLSPFEEFQRYKTH----PKICKILKGGKRISYG 314 (561)
Q Consensus 255 ~~~~g~~~~~~~~~-----~~~~ig~~~~--~---------~~~~~~~~~~~~~~~~~~~----p~~~~~l~~~~~~~~~ 314 (561)
...+..++||..+ +...+.+... . ..........+.++.+... +.+.++++....+..
T Consensus 211 -~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~- 288 (410)
T 3c96_A 211 -EHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQ- 288 (410)
T ss_dssp -TTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEE-
T ss_pred -CCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccce-
Confidence 1133456777642 3333333221 1 0111112333444444332 124455543322211
Q ss_pred ceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhc
Q psy14496 315 ARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQAS 389 (561)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~ 389 (561)
.+.......++|..+|++|+|||||.++|+.|||+|+||+||..||+.|... ++....|..|+++++..
T Consensus 289 ---~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~~ 357 (410)
T 3c96_A 289 ---YPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRPT 357 (410)
T ss_dssp ---EEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHH
T ss_pred ---eecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHH
Confidence 1111112356888899999999999999999999999999999999999762 33323399999998865
No 20
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.95 E-value=7.4e-27 Score=240.68 Aligned_cols=322 Identities=13% Similarity=0.131 Sum_probs=177.1
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
++.+||+||||||+||++|+.|++. |++|+||||.+.+......|..+.+..+. .+..+.... .........
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~g~~l~~~~~~-~l~~~g~~~-~~~~~~~~~ 74 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDA------GVDVDVYERSPQPLSGFGTGIVVQPELVH-YLLEQGVEL-DSISVPSSS 74 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCCCCSCEEECCHHHHH-HHHHTTCCG-GGTCBCCCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccccccccChhHHH-HHHHcCCcc-ccccccccc
Confidence 3568999999999999999999999 99999999987642222234445666543 233332100 011111111
Q ss_pred hhhhcC-CCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 100 FLFLSS-KKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
+.++.. .+.. +.. .......+.+..|.+.|.+.+ .|++++++++|+++..++++ +.|.+
T Consensus 75 ~~~~~~~~g~~-~~~-------~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~-------- 134 (397)
T 2vou_A 75 MEYVDALTGER-VGS-------VPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET--VQMRF-------- 134 (397)
T ss_dssp EEEEETTTCCE-EEE-------EECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC--EEEEE--------
T ss_pred eEEEecCCCCc-ccc-------ccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE--EEEEE--------
Confidence 222222 1111 000 001123478889999998875 58999999999999876443 33554
Q ss_pred CceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCcccc-ceeEEEEeeCCCccCCC------cEEEEecc
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYS-LGIKELWTINPKLHKKG------LVIHTIGW 251 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~ 251 (561)
++|.++++|+||+|||.+|.+|+.+. . . .+...+ ..+...+ +.....+. ...+.+
T Consensus 135 -------~~g~~~~ad~vV~AdG~~S~vr~~~~-~----~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 196 (397)
T 2vou_A 135 -------SDGTKAEANWVIGADGGASVVRKRLL-G----I--EPTYAGYVTWRGVL--QPGEVADDVWNYFNDKFTYG-- 196 (397)
T ss_dssp -------TTSCEEEESEEEECCCTTCHHHHHHH-C----C--CCEEEEEEEEEEEE--CTTSSCHHHHHHHTTEEEEE--
T ss_pred -------CCCCEEECCEEEECCCcchhHHHHhc-c----C--CCCccceEEEEEEe--eccccChhhhhhhcCceeEE--
Confidence 34568999999999999999988854 2 1 111111 1122222 11111110 011111
Q ss_pred CCCCCCCceEEEEEcCC--C----eEEEEEEecCCC--------CCC-----------C-CChH---HHHHHhh-hChhH
Q psy14496 252 PLDYKTYGGGFLYHMEN--N----QISIGYIISLDY--------KNP-----------Y-LSPF---EEFQRYK-THPKI 301 (561)
Q Consensus 252 p~~~~~~g~~~~~~~~~--~----~~~ig~~~~~~~--------~~~-----------~-~~~~---~~~~~~~-~~p~~ 301 (561)
. ...+...+||..+ + .+.+.+...... .+. . .... +.++.+. ..+.+
T Consensus 197 -~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (397)
T 2vou_A 197 -L--LDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKPF 273 (397)
T ss_dssp -E--ETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHHH
T ss_pred -e--cCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChHH
Confidence 0 1111223344432 1 333333322111 000 0 0111 1122221 12225
Q ss_pred HHhhcCC-eeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchh
Q psy14496 302 CKILKGG-KRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLI 380 (561)
Q Consensus 302 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~ 380 (561)
.++++.. ....+ .+.. ...++|..+|++|+|||||.++|+.|||+|+||+||..||+.|.. ..+....|+
T Consensus 274 ~~~~~~~~~~~~~---~~~~---~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~ 344 (397)
T 2vou_A 274 RDLVLNASSPFVT---VVAD---ATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQ 344 (397)
T ss_dssp HHHHHHCSSCEEE---EEEE---BCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHH
T ss_pred HHHHhccCCccee---eeee---ecCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHH
Confidence 5544322 11111 1111 134678889999999999999999999999999999999999864 223323399
Q ss_pred hHHHHHhhchhhHhhhhhhc
Q psy14496 381 TYKTSFQASWLYKELYKARN 400 (561)
Q Consensus 381 ~y~~~~~~~~~~~~~~~~~~ 400 (561)
.|+++++.. ....+..++.
T Consensus 345 ~Ye~~R~~~-~~~~~~~s~~ 363 (397)
T 2vou_A 345 SWETRQLQQ-GHAYLNKVKK 363 (397)
T ss_dssp HHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHH
Confidence 999988865 3333333333
No 21
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.95 E-value=3.6e-26 Score=244.68 Aligned_cols=337 Identities=16% Similarity=0.121 Sum_probs=187.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhh--ccccc----cCCccccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL--FPKEK----LNKLFNTP 94 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l--~~~~~----~~~~~~~~ 94 (561)
+++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+++++++.+ ++.+. .+.+....
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~------G~~V~vlEr~~~~~~~-~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 97 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR------QVGHLVVEQTDGTITH-PRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHP 97 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCSCCSS-CCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CceeeeCHHHHHHHHHcCChHHHHhhcCCcccc
Confidence 458999999999999999999999 9999999999876543 24566777766432 11111 11111000
Q ss_pred cchhhhhhhcCCCCcccCCCCCCc-----e--eecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEE
Q psy14496 95 VIEERFLFLSSKKSYKIPSWILPI-----C--FKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCG 167 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~-----~--~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~ 167 (561)
....+.....+..+.....+. . ......+.++|..|.+.|.+.+.+. |+++++|+++..++++ + .
T Consensus 98 ---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~ 169 (549)
T 2r0c_A 98 ---LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-R 169 (549)
T ss_dssp ---CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-E
T ss_pred ---cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-E
Confidence 000111110000000000000 0 0112357899999999999999776 9999999999886544 2 3
Q ss_pred EEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCC----ccCCC
Q psy14496 168 IATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPK----LHKKG 243 (561)
Q Consensus 168 V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 243 (561)
|.+.+. .+|+ ..+++||+||+|||.+|.+|+. +|+......... ..+...+..+.. ...+.
T Consensus 170 v~~~~~---~~G~-------~~~i~a~~vVgADG~~S~vR~~----lg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (549)
T 2r0c_A 170 ATITDL---RTGA-------TRAVHARYLVACDGASSPTRKA----LGIDAPPRHRTQ-VFRNILFRAPELRSLLGERAA 234 (549)
T ss_dssp EEEEET---TTCC-------EEEEEEEEEEECCCTTCHHHHH----HTCCCCBSSCCE-EEEEEEEECTTHHHHHGGGCC
T ss_pred EEEEEC---CCCC-------EEEEEeCEEEECCCCCcHHHHH----cCCCCCCCcccc-eEEEEEEECCchHHhcCCCCc
Confidence 444220 1121 1479999999999999999888 455443221111 112222332210 00111
Q ss_pred cEEEEeccCCCCCCC-ceEEEEEcCC-CeEEEEEEecCCCCC-CCCChHHHHHHhhhChhHHHhhcCCeeeeecceeecc
Q psy14496 244 LVIHTIGWPLDYKTY-GGGFLYHMEN-NQISIGYIISLDYKN-PYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITT 320 (561)
Q Consensus 244 ~~~~~~~~p~~~~~~-g~~~~~~~~~-~~~~ig~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~ 320 (561)
.. +.+. ... +..+++|.++ +.+.+.+ ..+... ......+.++.+...+ +. .+.+......+.
T Consensus 235 ~~-~~~~-----~p~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-----~~-~~~~~~~~~~~~- 299 (549)
T 2r0c_A 235 LF-FFLM-----LSSSLRFPLRALDGRGLYRLTV--GVDDASKSTMDSFELVRRAVAFD-----TE-IEVLSDSEWHLT- 299 (549)
T ss_dssp SE-EEEE-----EETTEEEEEEESSSSSEEEEEE--ECSTTCCSCCCHHHHHHHHBCSC-----CC-CEEEEEEEEEEC-
T ss_pred eE-EEEE-----CCCCcEEEEEEECCCcEEEEEe--cCCCCCCCHHHHHHHHHHHhCCC-----Cc-eeEEEEecchhH-
Confidence 11 2210 111 2356777754 3444433 111111 1112223333322110 00 122221111111
Q ss_pred CCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhc
Q psy14496 321 GGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARN 400 (561)
Q Consensus 321 ~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~ 400 (561)
....++|..+||+|+|||||.++|+.|||+|+||+||..||+.|...+.+......|..|+++|+.. ....+..++.
T Consensus 300 --~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~-a~~~~~~s~~ 376 (549)
T 2r0c_A 300 --HRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV-AITSLEEANV 376 (549)
T ss_dssp --CEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH-HHHHHHC---
T ss_pred --hhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1235678889999999999999999999999999999999999999886433323499999999865 3444555554
Q ss_pred cchhh
Q psy14496 401 FKPAM 405 (561)
Q Consensus 401 ~~~~~ 405 (561)
....+
T Consensus 377 ~~~~~ 381 (549)
T 2r0c_A 377 NLRRT 381 (549)
T ss_dssp -----
T ss_pred HHHhh
Confidence 44443
No 22
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=1.6e-25 Score=230.74 Aligned_cols=318 Identities=15% Similarity=0.119 Sum_probs=174.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecce-eChhhHHhhc---cccccCCccccccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAI-IDPRSIFELF---PKEKLNKLFNTPVI 96 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~-~~~~~l~~l~---~~~~~~~~~~~~~~ 96 (561)
+.+||+||||||+||++|+.|++. |++|+||||.+.++.+...+.+ +.+....+.+ +.+..-........
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~ 98 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN------GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMG 98 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccc
Confidence 468999999999999999999999 9999999999776443222221 2221111111 21110000000000
Q ss_pred hhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccc
Q psy14496 97 EERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGIN 176 (561)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~ 176 (561)
. .+++..+..... ...+.. .......++|..|.+.|.+.+.+ ++++++++|+++..+++ . +.|++
T Consensus 99 ~---~~~~~~g~~~~~-~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~-v~v~~------ 163 (398)
T 2xdo_A 99 V---NIADEKGNILST-KNVKPE-NRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKK-K-WTLTF------ 163 (398)
T ss_dssp E---EEECSSSEEEEE-CCCGGG-TTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSS-S-EEEEE------
T ss_pred e---EEECCCCCchhh-cccccc-CCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCC-E-EEEEE------
Confidence 0 112221111110 000110 01224468999999999987643 67899999999987643 3 33554
Q ss_pred cCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccc-eeEEEEeeCC---Ccc----CCCcEEEE
Q psy14496 177 KEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSL-GIKELWTINP---KLH----KKGLVIHT 248 (561)
Q Consensus 177 ~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~---~~~----~~~~~~~~ 248 (561)
++|.++++|+||+|||.+|.+|+. ++... +...+. .+...+.... +.. ..+.. +.
T Consensus 164 ---------~~g~~~~ad~vV~AdG~~S~vR~~----l~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~ 226 (398)
T 2xdo_A 164 ---------ENKPSETADLVILANGGMSKVRKF----VTDTE---VEETGTFNIQADIHQPEINCPGFFQLCNGNRL-MA 226 (398)
T ss_dssp ---------TTSCCEEESEEEECSCTTCSCCTT----TCCCC---CEEEEEEEEEEEESSHHHHSHHHHHHHTTSEE-EE
T ss_pred ---------CCCcEEecCEEEECCCcchhHHhh----ccCCC---ceEcceEEEEEEeCchhccCchhHhhcCCceE-EE
Confidence 335679999999999999999886 33211 111111 1111111000 000 11211 11
Q ss_pred eccCCCCCCCceEEEEEcCCCeEEEEEEecCC--CCC----CCCChHHHHH----Hhhh-ChhHHHhhcCC-eeeeecce
Q psy14496 249 IGWPLDYKTYGGGFLYHMENNQISIGYIISLD--YKN----PYLSPFEEFQ----RYKT-HPKICKILKGG-KRISYGAR 316 (561)
Q Consensus 249 ~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~--~~~----~~~~~~~~~~----~~~~-~p~~~~~l~~~-~~~~~~~~ 316 (561)
+ +.....+.+|.+++.+.+.+..... +.. +..++.+..+ .|.. .+.+.+++... ....+...
T Consensus 227 ~------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (398)
T 2xdo_A 227 S------HQGNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATR 300 (398)
T ss_dssp E------ETTEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEE
T ss_pred e------cCCCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeE
Confidence 1 1122334557777777766654322 111 1122322222 2322 34555555322 11112111
Q ss_pred eeccCCCccCCeeec-C--CEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCC-CccchhhHHHHHhhc
Q psy14496 317 TITTGGLQSLPEFIF-D--GGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNN-KFNKLITYKTSFQAS 389 (561)
Q Consensus 317 ~~~~~~~~~~~~~~~-~--~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~-~~~~l~~y~~~~~~~ 389 (561)
.++ ..++|.. + |++|+|||||.++|+.|||+|+||+||..||+.|... .++ ....|+.|+++++..
T Consensus 301 ~~~-----~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~~~ 370 (398)
T 2xdo_A 301 IFP-----LEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMFIY 370 (398)
T ss_dssp ECC-----CCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHHHH
T ss_pred ecc-----CCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHH
Confidence 111 1235544 5 8999999999999999999999999999999999763 233 222399999988864
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.93 E-value=7.3e-26 Score=231.85 Aligned_cols=319 Identities=12% Similarity=0.002 Sum_probs=175.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhcccccc-CC-ccccccchhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL-NK-LFNTPVIEERF 100 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~-~~-~~~~~~~~~~~ 100 (561)
.||+|||||||||++|+.|++. +||++|+||||.+.++. ...|..+.+.++......... .. ..........+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQEV-LGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDF 75 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTTCC-CCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCE
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCCCc-ceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccce
Confidence 4899999999999999999997 67999999999987632 112223333333211100000 00 00001111112
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
.+... +. .+. . ..+...+.++|..|.+.|.+.+.+.|++++++++|+++...
T Consensus 76 ~~~~~-g~-~~~-----~-~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------------- 127 (381)
T 3c4a_A 76 KLVHH-NE-PSL-----M-STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------------- 127 (381)
T ss_dssp EEEES-SS-EEE-----C-CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------------
T ss_pred EEEeC-Ce-eEE-----e-cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--------------------
Confidence 22221 10 111 0 00123568999999999999999999999999999776321
Q ss_pred eecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCce
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGG 260 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~ 260 (561)
.++++|+||+|||.+|. |+.+...++.... .+ .+...+...... ....... +.. ...|.
T Consensus 128 --------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~----~~-~~~~~~~~~~~~--~~~~~~~-~~~----~~~g~ 186 (381)
T 3c4a_A 128 --------PLADYDLVVLANGVNHK-TAHFTEALVPQVD----YG-RNKYIWYGTSQL--FDQMNLV-FRT----HGKDI 186 (381)
T ss_dssp --------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCE----EE-EEEEEEEEESSC--CSSEEEE-EEE----ETTEE
T ss_pred --------ccccCCEEEECCCCCch-HHhhhhhcCCCcc----cC-CccEEEEecCCC--CCcceee-Eee----CCCcE
Confidence 02579999999999999 8775433444321 11 111122222211 1111111 111 12233
Q ss_pred EE--EEEcCCCeEEEEEEecCC----CCCCCCChHHHHHH----hhhChhHHHhhcCCeeeeecceeeccCCCccCCeee
Q psy14496 261 GF--LYHMENNQISIGYIISLD----YKNPYLSPFEEFQR----YKTHPKICKILKGGKRISYGARTITTGGLQSLPEFI 330 (561)
Q Consensus 261 ~~--~~~~~~~~~~ig~~~~~~----~~~~~~~~~~~~~~----~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (561)
.| ++|.+++...+.+....+ ..-+..+..+..+. |.......+++.... ..+ ... .....++|.
T Consensus 187 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~~~---~~~--~~~~~~~~~ 260 (381)
T 3c4a_A 187 FIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPG-LGW---RNF--MTLSHDRCH 260 (381)
T ss_dssp EEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTT-TCS---EEE--EECCCSCSE
T ss_pred EEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCC-cce---eee--ccccCCCcc
Confidence 23 478776665444333210 00011222222221 211100011121110 000 000 012356788
Q ss_pred cCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHHHHHhhchhhHhhhhhhccchhh
Q psy14496 331 FDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAM 405 (561)
Q Consensus 331 ~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~ 405 (561)
.+|++|+|||||.++|+.|||+|+||+||..||+.|... .+....|+.|+++++.. +...+..++.+.+++
T Consensus 261 ~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 261 DGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp ETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 899999999999999999999999999999999999763 33323399999998865 445555555544433
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.92 E-value=3.1e-24 Score=228.53 Aligned_cols=223 Identities=13% Similarity=0.122 Sum_probs=137.8
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
..+.++|..|.+.|.+.+.+.|++++++ +|+++..++++.+++|.+.+ |.+++||+||+|||.+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFR 229 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 3688999999999999999999999999 99999886667777787743 4589999999999999
Q ss_pred chhhHHHHHHcCCCCC----CCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEecC
Q psy14496 204 GHLSKQIIKKFNLDNK----KDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISL 279 (561)
Q Consensus 204 s~~~~~l~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~ 279 (561)
|.+++++ +|.... ..+....+.+. ...+............. ...|..|++|..+ ...+|++...
T Consensus 230 S~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 230 GLLINQT---LGGRFQSFSDVLPNNRAVALR--VPRENDEDMRPYTTATA------MSAGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEE--EECSSGGGCCSSEEEEE------ETTEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCCccccccCcccceEEEE--eccCCCCCCCcceecee------cCCCcEEEEECCC-ceEEEEEECC
Confidence 9985442 344321 11121122222 22221100111111111 2245578889865 6777776543
Q ss_pred CCCCCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHHHH
Q psy14496 280 DYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSG 359 (561)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a 359 (561)
+. .+..+..+.+...-...+.+.....+.... ++ .+++..+|++++|||||+++|+.|+|+++|+.||
T Consensus 298 ~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da 365 (511)
T 2weu_A 298 EF----ISPEEAERELRSTVAPGRDDLEANHIQMRI------GR--NERTWINNCVAVGLSAAFVEPLESTGIFFIQHAI 365 (511)
T ss_dssp TT----SCHHHHHHHHHHHHCTTCTTSCCEEEECCC------EE--ESCSEETTEEECGGGTEECCGGGCCHHHHHHHHH
T ss_pred CC----CCHHHHHHHHHHHhCcccccccceeEEeec------cc--cccccCCCEEEEechhhccCccccccHHHHHHHH
Confidence 22 223333332221100001111222222111 11 3455679999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCccchhhHHHHHhhc
Q psy14496 360 ILVADSIFKKICSNNKFNKLITYKTSFQAS 389 (561)
Q Consensus 360 ~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~ 389 (561)
..||+.|.. .+.....++.|++.++..
T Consensus 366 ~~La~~l~~---~~~~~~~l~~Y~~~~~~~ 392 (511)
T 2weu_A 366 EQLVKHFPG---ERWDPVLISAYNERMAHM 392 (511)
T ss_dssp HHHHHTCCC---TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcc---CCCCHHHHHHHHHHHHHH
Confidence 999988753 122222389999888754
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.92 E-value=5.8e-24 Score=227.51 Aligned_cols=217 Identities=11% Similarity=0.071 Sum_probs=134.6
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
..+.++|..|.+.|.+.+.+.|++++.+ +|+++..++++.+++|.+.+ |.++++|+||+|||.+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMR 221 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCc
Confidence 3688999999999999999999999999 89999886566667777643 4579999999999999
Q ss_pred chhhHHHHHHcCCCCCC----CCccccceeEEEEeeCCC--ccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEe
Q psy14496 204 GHLSKQIIKKFNLDNKK----DPQTYSLGIKELWTINPK--LHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYII 277 (561)
Q Consensus 204 s~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~ 277 (561)
|.+++++ ++..... .+....+.+. ...... ...+... ... ...|..|++|..+ ...++++.
T Consensus 222 s~~~~~~---lg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~------~~~g~~~~~p~~~-~~~~g~v~ 288 (538)
T 2aqj_A 222 GLLINQA---LKEPFIDMSDYLLCDSAVASA--VPNDDARDGVEPYTS-SIA------MNSGWTWKIPMLG-RFGSGYVF 288 (538)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEE--EECCHHHHCCCSSEE-EEE------CSSEEEEEEEETT-EEEEEEEE
T ss_pred hhhHHHH---hCCCccccccccccceEEEEe--cccCCcccCCCCcee-eee------cCCceEEEecCCC-ceEEEEEE
Confidence 9985442 3432210 1111111111 111100 0111111 111 2345678889865 56677765
Q ss_pred cCCCCCCCCChHHHHHHhh---hChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchH
Q psy14496 278 SLDYKNPYLSPFEEFQRYK---THPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHT 354 (561)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~---~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~ 354 (561)
..++ .++.+..+.+. ..+ + +.....+.+. .+ ..+++..+|++++|||||+++|+.|+|+++
T Consensus 289 ~~~~----~~~~~~~~~l~~~~~~~---~-~~~~~~~~~~------~~--~~~~~~~grvvliGDAAh~~~P~~gqG~~~ 352 (538)
T 2aqj_A 289 SSHF----TSRDQATADFLKLWGLS---D-NQPLNQIKFR------VG--RNKRAWVNNCVSIGLSSCFLEPLESTGIYF 352 (538)
T ss_dssp CTTT----SCHHHHHHHHHHHHTCC---T-TCCCEEEECC------CE--EESCSEETTEEECGGGTEECCGGGSCHHHH
T ss_pred cCCC----CChHHHHHHHHHHhcCC---C-CCCceEEeec------cc--cccccccCCEEEEcccccccCcchhccHHH
Confidence 4322 12222222221 111 1 1111222111 11 134566799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhc
Q psy14496 355 SIKSGILVADSIFKKICSNNKFNK-LITYKTSFQAS 389 (561)
Q Consensus 355 Ai~~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~ 389 (561)
|++||..||+.|. .+..... |..|++.++..
T Consensus 353 a~~da~~La~~L~----~~~~~~~~l~~Y~~~~~~~ 384 (538)
T 2aqj_A 353 IYAALYQLVKHFP----DTSFDPRLSDAFNAEIVHM 384 (538)
T ss_dssp HHHHHHHHHHTCC----BTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----ccCCCHHHHHHHHHHHHHH
Confidence 9999999998764 2222233 89999888765
No 26
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.92 E-value=3.3e-24 Score=228.63 Aligned_cols=226 Identities=12% Similarity=0.149 Sum_probs=133.3
Q ss_pred cEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 125 NYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
.+.++|..|.+.|.+.+++ .|++++++ +|+++..++++.+++|.+.+ |.+++||+||+|||.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 6889999999999999998 89999999 69999876566666777632 4579999999999999
Q ss_pred chhhHHHHHHcCCCCCCCC----ccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEecC
Q psy14496 204 GHLSKQIIKKFNLDNKKDP----QTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISL 279 (561)
Q Consensus 204 s~~~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~ 279 (561)
|.++++. +|......+ ....+.+......+.....+ ...... ...|..|++|..+ ...++++...
T Consensus 233 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~g~~~~~pl~~-~~~~~~v~~~ 301 (526)
T 2pyx_A 233 SLLLGEH---LQVPFLSQKSVLFNDRALAIQVPYSDANSPIAS-CTHSTA------QPNGWIWDIGLPT-RKGVGYVYSS 301 (526)
T ss_dssp CCCCCCC---TCCCEEECHHHHCCCEEEEEEEECSSTTCCCCS-SEEEEE------ETTEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCcccccccccCccEEEEEeeccCCCCCCCC-ceeEEe------cCCCeEEEeeCCC-ceEEEEEecC
Confidence 9983331 443321101 11112221111110011111 111111 1344567888765 4566665543
Q ss_pred CCCCCCCChHHHHHHhhhChhHHHhhc--CCeeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHH
Q psy14496 280 DYKNPYLSPFEEFQRYKTHPKICKILK--GGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIK 357 (561)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~p~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~ 357 (561)
.+..+ ....+.+..+.... .+.+. ....+.+ . .+ ..+++..+|++++|||||+++|+.|+|+++|++
T Consensus 302 ~~~~~-~~~~~~l~~~l~~~--~~~l~~~~~~~~~~-----~-~~--~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~ 370 (526)
T 2pyx_A 302 SHTND-IDAQKTLFNYLGVD--GAAADKLEPRQLAI-----N-PG--YRAKCWQNNCIAIGMAAGFIEPLEASALALIEW 370 (526)
T ss_dssp TTCCH-HHHHHHHHHHHTCC--HHHHHHCCCEEEEC-----C-CE--EESCSEETTEEECGGGTEECCCTTCHHHHHHHH
T ss_pred CCCCh-HHHHHHHHHHHHhc--CcccccCCceEEec-----c-cC--ccccccCCCEEEEEhhhcccCccccccHHHHHH
Confidence 32211 11122233222110 11121 1111111 1 01 134566799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCccchhhHHHHHhhch
Q psy14496 358 SGILVADSIFKKICSNNKFNKLITYKTSFQASW 390 (561)
Q Consensus 358 ~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~~~ 390 (561)
||..||+.|.... +.....+..|++.++..+
T Consensus 371 da~~La~~L~~~~--~~~~~~l~~Y~~~~~~~~ 401 (526)
T 2pyx_A 371 TASTLAQQLPPNR--MVMDTISARVNERYQQHW 401 (526)
T ss_dssp HHHHHHHTCCSCH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcC--CcCHHHHHHHHHHHHHHH
Confidence 9999998875211 111123889998887653
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.91 E-value=2.1e-23 Score=223.44 Aligned_cols=220 Identities=11% Similarity=0.078 Sum_probs=134.2
Q ss_pred cEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 125 NYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
.+.+++..|.+.|.+.+++. |++++++ +|+++..++++.+++|.+.+ |.+++||+||+|+|.+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGFR 251 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCCc
Confidence 67899999999999999988 9999999 99999876567777787743 4579999999999999
Q ss_pred chhhHHHHHHcCCCCCC----CCccccceeEEEEeeCCC--ccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEe
Q psy14496 204 GHLSKQIIKKFNLDNKK----DPQTYSLGIKELWTINPK--LHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYII 277 (561)
Q Consensus 204 s~~~~~l~~~~g~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~ 277 (561)
|.++++. ++..... .+....+.+. ...... ...+. ..... ...+..|++|..+ ...++++.
T Consensus 252 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~------~~~g~~~~ipl~~-~~~~g~v~ 318 (550)
T 2e4g_A 252 GLLINKA---MEEPFLDMSDHLLNDSAVATQ--VPHDDDANGVEPF-TSAIA------MKSGWTWKIPMLG-RFGTGYVY 318 (550)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEE--EECCHHHHCCCSS-EEEEE------CSSEEEEEEECSS-EEEEEEEE
T ss_pred hhhHHHH---hCCCcccccccccccceEEEe--ecccCCcccCCCc-eeeee------cCCceEEEccCCC-ccceEEEE
Confidence 9974432 3433110 1111111111 111100 01111 11111 1345567888765 66677766
Q ss_pred cCCCCCCCCChHHHHHHhhhChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEEecCCccCCCcccccchHHHH
Q psy14496 278 SLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIK 357 (561)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~ 357 (561)
...+ .+..+..+.+...-...+.+.....+.+. .+ ..+++..+|++++|||||+++|+.|+|+++|+.
T Consensus 319 ~~~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~~------~~--~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~ 386 (550)
T 2e4g_A 319 SSRF----ATEDEAVREFCEMWHLDPETQPLNRIRFR------VG--RNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYA 386 (550)
T ss_dssp CTTT----SCHHHHHHHHHHHTTCCTTTSCCEEEECC------CE--EESCSEETTEEECSTTTEECCGGGSCHHHHHHH
T ss_pred ecCC----CChHHHHHHHHHhhCcCcccCCCceEEec------CC--CccccccCCEEEEehhhcccCccchhhHHHHHH
Confidence 4332 12222222222100000111222222111 11 134556799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCccc-hhhHHHHHhhc
Q psy14496 358 SGILVADSIFKKICSNNKFNK-LITYKTSFQAS 389 (561)
Q Consensus 358 ~a~~lA~~l~~~l~~~~~~~~-l~~y~~~~~~~ 389 (561)
+|..||+.|.. +..... +..|++.++..
T Consensus 387 da~~La~~L~~----~~~~~~~l~~Y~~~~~~~ 415 (550)
T 2e4g_A 387 ALYQLVKHFPD----KSLNPVLTARFNREIETM 415 (550)
T ss_dssp HHHHHHHTCCC----TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccc----cCCCHHHHHHHHHHHHHH
Confidence 99999987642 222233 89999888765
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.88 E-value=3e-22 Score=208.08 Aligned_cols=307 Identities=10% Similarity=0.046 Sum_probs=161.0
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC---CceeecceeChhhHHh---h-ccccccCCcc
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG---AHILSGAIIDPRSIFE---L-FPKEKLNKLF 91 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g---~~~~~G~~~~~~~l~~---l-~~~~~~~~~~ 91 (561)
..|.+||+||||||+||++|+.|++. |++|+|||+.+... +...++.......+.. + +..|...
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~--- 89 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQH------DVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE--- 89 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHHT------TCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH---
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHHC------CCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh---
Confidence 45779999999999999999999999 99999999987321 1222222233333321 1 1122200
Q ss_pred ccccchhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCc-eEeEEEEcCCCCEEEEEe
Q psy14496 92 NTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGF-SASEILYDSKNNVCGIAT 170 (561)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~-~v~~i~~~~~g~v~~V~~ 170 (561)
........+.+... ..+.+. ... ....+.+.+..+...|.+.+++.|++++... .+.++.
T Consensus 90 ~~~~~~~~~~~~~~-~~~~~~-----~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------ 150 (430)
T 3ihm_A 90 EFGYFGHYYYVGGP-QPMRFY-----GDL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------ 150 (430)
T ss_dssp HHCEEEEEEEECSS-SCEEEE-----EEE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------
T ss_pred cccccceeEEECCC-Cccccc-----hhc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------
Confidence 00000001111100 000110 000 1125678999999999999999999887632 011110
Q ss_pred cccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCC----CCCCccccceeEEEEeeCCCccCCCcEE
Q psy14496 171 NNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDN----KKDPQTYSLGIKELWTINPKLHKKGLVI 246 (561)
Q Consensus 171 ~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (561)
.....+|+||+|||.+|.++ . ++... ...++.. +....+..+..+. ......
T Consensus 151 -----------------~~~~~ad~VV~AdG~~S~~~-~----~~~~~~~~~~~~p~r~-~~~~~~~g~~~~~-~~~~~~ 206 (430)
T 3ihm_A 151 -----------------GLSEQYDLLVVCTGKYALGK-V----FEKQSENSPFEKPQRA-LCVGLFKGIKEAP-IRAVTM 206 (430)
T ss_dssp -----------------HHHTTSSEEEECCCCTTGGG-G----SCBCGGGCCCSSCSSE-EEEEEEESBCCCS-SCCEEE
T ss_pred -----------------hhcccCCEEEECCCCcchHH-h----ccCCCCCCcccCCCee-EEEEEEccCCCCC-cCeeee
Confidence 01136899999999999864 2 22211 1112111 2221122222211 112222
Q ss_pred EEeccCCCCCCCceEEEEEc--CCCeEEEEEEecCC------CCCCC--CChHHHH----HHhh-hChhHHHhhcCCeee
Q psy14496 247 HTIGWPLDYKTYGGGFLYHM--ENNQISIGYIISLD------YKNPY--LSPFEEF----QRYK-THPKICKILKGGKRI 311 (561)
Q Consensus 247 ~~~~~p~~~~~~g~~~~~~~--~~~~~~ig~~~~~~------~~~~~--~~~~~~~----~~~~-~~p~~~~~l~~~~~~ 311 (561)
+.+ ...|..|++|. .++...+.+..... +.... .++.+.+ +.|. ..|.+.+.+......
T Consensus 207 ~~~------~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (430)
T 3ihm_A 207 SFS------PGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFD 280 (430)
T ss_dssp EEE------TTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCE
T ss_pred eec------CCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhc
Confidence 221 22344566664 23344443332211 11110 1333222 2333 356666666544411
Q ss_pred ee--cc-----eeeccCCCccCCeeecCCEEE-EecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCCCccchhhHH
Q psy14496 312 SY--GA-----RTITTGGLQSLPEFIFDGGAF-IGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYK 383 (561)
Q Consensus 312 ~~--~~-----~~~~~~~~~~~~~~~~~~v~l-vGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~~~~~l~~y~ 383 (561)
.. .. ...+. .....++|..+++++ +|||||.++|+.|||+|+||+||..||+.|.+. ++....|..|+
T Consensus 281 ~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~~~~~~~~ 356 (430)
T 3ihm_A 281 LANSSLDILQGGVVPA-FRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYDLRFSEHL 356 (430)
T ss_dssp ESSSTTSEEEECCCCE-EBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCSHHHHHHH
T ss_pred cccCccceeecceeec-ccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHHHHHHHHH
Confidence 10 00 00010 012345677788988 999999999999999999999999999999874 44434489998
Q ss_pred HHHh
Q psy14496 384 TSFQ 387 (561)
Q Consensus 384 ~~~~ 387 (561)
.+++
T Consensus 357 ~~r~ 360 (430)
T 3ihm_A 357 ERRR 360 (430)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7776
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.71 E-value=3.1e-16 Score=165.35 Aligned_cols=145 Identities=19% Similarity=0.144 Sum_probs=97.0
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
..+.+||+||||||+||++|+.|++. |++|+|||+.+.++... ...+.+..+..+ ..+.
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liEk~~~~g~~~--~~~~~~~~~~~l-~~~g------------ 147 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALL------GARVVLVEKRIKFSRHN--VLHLWPFTIHDL-RALG------------ 147 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCSSCCCCC--EEECCHHHHHHH-HTTT------------
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHC------CCeEEEEEeccccCCCC--cccCChhHHHHH-HHcC------------
Confidence 34679999999999999999999999 99999999998775431 112334333322 1111
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcC-CCCEEEEEeccccccc
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDS-KNNVCGIATNNFGINK 177 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~-~g~v~~V~~~~~~~~~ 177 (561)
+... .. .+.. .....+++.++.+.|.+.+++.|++++++++|+++..++ ++..+.|.+.+. .
T Consensus 148 -~~~~--~~-----~~~~------~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~ 210 (497)
T 2bry_A 148 -AKKF--YG-----RFCT------GTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---P 210 (497)
T ss_dssp -HHHH--CT-----TTTC------TTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---C
T ss_pred -Cccc--cc-----cccc------cccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---C
Confidence 0000 00 0000 112357889999999999999999999999999998642 233455655210 0
Q ss_pred CCceecccccCeEEecCEEEEccCCCchhhH
Q psy14496 178 EGIIKKNFQLGMELYAKYTLFAEGSRGHLSK 208 (561)
Q Consensus 178 ~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~ 208 (561)
+|+ ..++++|+||+|||.+|.++.
T Consensus 211 ~g~-------~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 211 PAQ-------LASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp CHH-------HHTCCBSEEEECCCTTCCCTT
T ss_pred CCC-------EEEEEcCEEEECCCCCccccc
Confidence 111 036899999999999999754
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.70 E-value=1.3e-15 Score=155.60 Aligned_cols=297 Identities=18% Similarity=0.171 Sum_probs=155.0
Q ss_pred CCCCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc-eeecceeChhh-------HH-------h
Q psy14496 16 GPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH-ILSGAIIDPRS-------IF-------E 80 (561)
Q Consensus 16 ~~~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~-~~~G~~~~~~~-------l~-------~ 80 (561)
++..++++||+|||||++|+++|+.|++. |++|+|||+....++. ..+++.+.+.. +. +
T Consensus 11 ~~~~~~~~dvvIIGgG~~Gl~~A~~La~~------G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~ 84 (382)
T 1ryi_A 11 IRAMKRHYEAVVIGGGIIGSAIAYYLAKE------NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQR 84 (382)
T ss_dssp ---CCSEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHH
T ss_pred hhccCCCCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHH
Confidence 33445679999999999999999999999 9999999998755432 12233332211 00 1
Q ss_pred hccccc--c----CCc--cc------cccchhhhhhhcCCC---Cc----------ccCCCC--CCceeecCCcEEeeHH
Q psy14496 81 LFPKEK--L----NKL--FN------TPVIEERFLFLSSKK---SY----------KIPSWI--LPICFKNHGNYIISLS 131 (561)
Q Consensus 81 l~~~~~--~----~~~--~~------~~~~~~~~~~~~~~~---~~----------~~~~~~--~p~~~~~~~~~~i~r~ 131 (561)
.+..+. . +.. +. .......+..+.... .. ..+... ............+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (382)
T 1ryi_A 85 LYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPY 164 (382)
T ss_dssp HTTTHHHHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHH
T ss_pred HHHHHHHHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHH
Confidence 111110 0 000 00 000001111110000 00 000000 0001111224567888
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHH
Q psy14496 132 DLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQII 211 (561)
Q Consensus 132 ~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~ 211 (561)
.+.+.|.+.+.+.|++++.+++|+++..+ ++.+ +|.+.+ | +++||.||+|+|.+|. .+.
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s~---~l~ 223 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPS---------------G-DVWANHVVVASGVWSG---MFF 223 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETT---------------E-EEEEEEEEECCGGGTH---HHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCC---------------c-eEEcCEEEECCChhHH---HHH
Confidence 99999999999999999999999999865 4444 666632 3 7999999999999876 233
Q ss_pred HHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEecCCCCCCCCChH--
Q psy14496 212 KKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPF-- 289 (561)
Q Consensus 212 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~-- 289 (561)
+.++...+..+. .+....++.+... . ...+. ..+.|++|..++.+.+|........+...+..
T Consensus 224 ~~~~~~~~~~~~---~g~~~~~~~~~~~-~-~~~~~----------~~~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~ 288 (382)
T 1ryi_A 224 KQLGLNNAFLPV---KGECLSVWNDDIP-L-TKTLY----------HDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGL 288 (382)
T ss_dssp HHTTCCCCCEEE---EEEEEEEECCSSC-C-CSEEE----------ETTEEEEECTTSEEEEECCCEETCCCCSCCHHHH
T ss_pred HhcCCCCceecc---ceEEEEECCCCCC-c-cceEE----------cCCEEEEEcCCCeEEEeecccccCCCCCCCHHHH
Confidence 335544321111 1211112222111 1 11111 11457788777788887643322222222221
Q ss_pred HH-HHHhh-hChhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEEecCC-----ccCCCcccccchHHHHHHHHH
Q psy14496 290 EE-FQRYK-THPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNA-----GFMNVSRIKGIHTSIKSGILV 362 (561)
Q Consensus 290 ~~-~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa-----~~~~P~~g~G~~~Ai~~a~~l 362 (561)
+. ++.+. ..|. +...+.... |.....++.++..++|++. ....+++|.|+.+|...|..+
T Consensus 289 ~~l~~~~~~~~p~----l~~~~~~~~---------w~g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~l 355 (382)
T 1ryi_A 289 ESVMKKAKTMLPA----IQNMKVDRF---------WAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALI 355 (382)
T ss_dssp HHHHHHHHHHCGG----GGGSEEEEE---------EEEEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHH
T ss_pred HHHHHHHHHhCCC----cCCCceeeE---------EEEecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHH
Confidence 11 11111 1222 222222222 1111223346777788753 234678899999999999988
Q ss_pred HHHHH
Q psy14496 363 ADSIF 367 (561)
Q Consensus 363 A~~l~ 367 (561)
|+.|.
T Consensus 356 a~~i~ 360 (382)
T 1ryi_A 356 SDLIM 360 (382)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88774
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.68 E-value=1.2e-14 Score=149.54 Aligned_cols=200 Identities=13% Similarity=0.116 Sum_probs=111.3
Q ss_pred cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 125 NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
...++...+.+.|.+.+++.|++++++++|+++..+ ++.+++|.+.+ | ++++|.||+|+|.+|
T Consensus 168 ~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 168 AGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTR---------------G-TIHAGKVALAGAGHS 230 (405)
T ss_dssp CBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT---------------C-CEEEEEEEECCGGGH
T ss_pred CccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCC---------------c-eEECCEEEECCchhH
Confidence 455678899999999999999999999999999875 56677787742 3 689999999999988
Q ss_pred h-hhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEecC-CCC
Q psy14496 205 H-LSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISL-DYK 282 (561)
Q Consensus 205 ~-~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~~-~~~ 282 (561)
. +++. +++..+..+. .+...+.+ +....... .+.. .....|+.|..++.+.+|..... ...
T Consensus 231 ~~l~~~----~g~~~~~~~~---~~~~~~~~-~~~~~~~~-~~~~--------~~~~~y~~p~~~g~~~ig~~~~~~~~~ 293 (405)
T 2gag_B 231 SVLAEM----AGFELPIQSH---PLQALVSE-LFEPVHPT-VVMS--------NHIHVYVSQAHKGELVMGAGIDSYNGY 293 (405)
T ss_dssp HHHHHH----HTCCCCEEEE---EEEEEEEE-EBCSCCCS-EEEE--------TTTTEEEEECTTSEEEEEEEECSSCCC
T ss_pred HHHHHH----cCCCCCcccc---ceeEEEec-CCccccCc-eEEe--------CCCcEEEEEcCCCcEEEEeccCCCCcc
Confidence 4 4333 5554321111 11111111 10000111 1111 11345677877778888876532 111
Q ss_pred CCCCChHHHHHHhhhC-hhHHHhhcCCeeeeecceeeccCCCccCCeeecCCEEEEecCC--cc--CCCcccccchHHHH
Q psy14496 283 NPYLSPFEEFQRYKTH-PKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNA--GF--MNVSRIKGIHTSIK 357 (561)
Q Consensus 283 ~~~~~~~~~~~~~~~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa--~~--~~P~~g~G~~~Ai~ 357 (561)
+...+. +..+.+... ..+.+.+...+.... |......+.++..++|+.. +. ...+.|.|+..|..
T Consensus 294 ~~~~~~-~~~~~l~~~~~~~~p~l~~~~~~~~---------w~g~~~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~ 363 (405)
T 2gag_B 294 GQRGAF-HVIQEQMAAAVELFPIFARAHVLRT---------WGGIVDTTMDASPIISKTPIQNLYVNCGWGTGGFKGTPG 363 (405)
T ss_dssp SSCCCT-HHHHHHHHHHHHHCGGGGGCEECEE---------EEEEEEEETTSCCEEEECSSBTEEEEECCGGGCSTTHHH
T ss_pred ccCCCH-HHHHHHHHHHHHhCCccccCCcceE---------EeeccccCCCCCCEecccCCCCEEEEecCCCchhhHHHH
Confidence 111221 122211110 011111222222221 1112233457888899864 22 23456788889888
Q ss_pred HHHHHHHHHHH
Q psy14496 358 SGILVADSIFK 368 (561)
Q Consensus 358 ~a~~lA~~l~~ 368 (561)
.|..+|+.|..
T Consensus 364 ~g~~la~~i~g 374 (405)
T 2gag_B 364 AGFTLAHTIAN 374 (405)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 88888887754
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.66 E-value=1.9e-14 Score=146.99 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=54.2
Q ss_pred cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 125 NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
...++...+.+.|.+.+++.|++++.+++|+++..+ ++.+.+|.+.+ | +++||.||.|+|.+|
T Consensus 143 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 143 DGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK---------------G-IIKTGIVVNATNAWA 205 (382)
T ss_dssp CCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT---------------E-EEECSEEEECCGGGH
T ss_pred CeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECC---------------c-EEECCEEEECcchhH
Confidence 456788999999999999999999999999999875 55666677642 3 799999999999987
Q ss_pred h
Q psy14496 205 H 205 (561)
Q Consensus 205 ~ 205 (561)
.
T Consensus 206 ~ 206 (382)
T 1y56_B 206 N 206 (382)
T ss_dssp H
T ss_pred H
Confidence 4
No 33
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=3e-14 Score=145.32 Aligned_cols=171 Identities=16% Similarity=0.132 Sum_probs=100.9
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc--eeecceeCh----hhHH-------hhcccc
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH--ILSGAIIDP----RSIF-------ELFPKE 85 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~--~~~G~~~~~----~~l~-------~l~~~~ 85 (561)
++.++||+|||||++||++|+.|+ . |++|+|||+.+.++.. ..+++.+.+ .... +++..+
T Consensus 6 ~~~~~dv~IIGaGi~Gls~A~~La-~------G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~ 78 (381)
T 3nyc_A 6 HPIEADYLVIGAGIAGASTGYWLS-A------HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNP 78 (381)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHT-T------TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHh-C------CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHh
Confidence 345799999999999999999999 8 9999999999766432 223333321 1111 111111
Q ss_pred cc---CCc-cc------cccch--hhh----hhhcCCC-Ccc----------cCCCC---CCceeecCCcEEeeHHHHHH
Q psy14496 86 KL---NKL-FN------TPVIE--ERF----LFLSSKK-SYK----------IPSWI---LPICFKNHGNYIISLSDLVR 135 (561)
Q Consensus 86 ~~---~~~-~~------~~~~~--~~~----~~~~~~~-~~~----------~~~~~---~p~~~~~~~~~~i~r~~l~~ 135 (561)
.. ... +. ..... ..+ ......+ ... .|... ............++...+.+
T Consensus 79 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 158 (381)
T 3nyc_A 79 PAGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQ 158 (381)
T ss_dssp CTTSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHH
T ss_pred hhhhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHH
Confidence 10 000 00 00000 000 0000000 000 00000 00112223356688999999
Q ss_pred HHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcC
Q psy14496 136 WMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFN 215 (561)
Q Consensus 136 ~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g 215 (561)
.|.+.+++.|++++++++|+++..++ +. ++|++.+ | +++||.||.|+|.+|. .+.+.++
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~---------------g-~i~a~~VV~A~G~~s~---~l~~~~g 217 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDA---------------G-SYRAAVLVNAAGAWCD---AIAGLAG 217 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSS---------------E-EEEESEEEECCGGGHH---HHHHHHT
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCC---------------C-EEEcCEEEECCChhHH---HHHHHhC
Confidence 99999999999999999999998753 33 6677642 3 7999999999998875 2333456
Q ss_pred CC
Q psy14496 216 LD 217 (561)
Q Consensus 216 ~~ 217 (561)
+.
T Consensus 218 ~~ 219 (381)
T 3nyc_A 218 VR 219 (381)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 34
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.63 E-value=1.6e-14 Score=144.73 Aligned_cols=41 Identities=27% Similarity=0.455 Sum_probs=36.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
|++||+||||||+||++|+.|++. |++|+||||.+.+++..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~------G~~V~vlE~~~~~gg~~ 41 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCceEEEECCcHHHHHHHHHHHHC------CCcEEEEECCCCCcccc
Confidence 468999999999999999999999 99999999998876643
No 35
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.60 E-value=4.7e-14 Score=154.76 Aligned_cols=161 Identities=9% Similarity=0.060 Sum_probs=97.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC--ceeecceeChh------hHH-----------hhc
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA--HILSGAIIDPR------SIF-----------ELF 82 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~--~~~~G~~~~~~------~l~-----------~l~ 82 (561)
.+||+|||||+||+++|+.|++. |++|+||||...++. ...+++.+.+. .+. +++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR------GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFY 345 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999 999999999866542 22233333221 111 111
Q ss_pred cccccCC------ccccccchhh---hhhhcCCC-Cc----cc---------CCCCCCceeecCCcEEeeHHHHHHHHHH
Q psy14496 83 PKEKLNK------LFNTPVIEER---FLFLSSKK-SY----KI---------PSWILPICFKNHGNYIISLSDLVRWMGK 139 (561)
Q Consensus 83 ~~~~~~~------~~~~~~~~~~---~~~~~~~~-~~----~~---------~~~~~p~~~~~~~~~~i~r~~l~~~L~~ 139 (561)
..+.... .+........ +..+...+ .. .+ +...............++...+.+.|.+
T Consensus 346 ~~l~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 425 (676)
T 3ps9_A 346 DQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLE 425 (676)
T ss_dssp HHCCSCCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred HHCCCCcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHH
Confidence 1111000 0000001111 11110000 00 00 0000001112233566888999999999
Q ss_pred HHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 140 KAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 140 ~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.+++.|++|+++++|+++..++ +. +.|.+.+ |.+++||.||+|+|.+|.
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~-~~-v~V~t~~---------------G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKD-DC-WLLNFAG---------------DQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEET-TE-EEEEETT---------------SCEEEESEEEECCGGGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeC-Ce-EEEEECC---------------CCEEECCEEEECCCcchh
Confidence 9999999999999999998763 33 4676632 457999999999999876
No 36
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.59 E-value=3.4e-13 Score=137.89 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=51.4
Q ss_pred cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 125 NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
...++...+.+.|.+.+++.|++++++++|+++..++++ +.|++.+ .+++||.||+|+|.+|
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~----------------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETAN----------------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETT----------------EEEEEEEEEECCGGGH
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCC----------------CEEEeCEEEEecCccH
Confidence 456788999999999999999999999999999875333 4465532 3799999999999876
Q ss_pred h
Q psy14496 205 H 205 (561)
Q Consensus 205 ~ 205 (561)
.
T Consensus 206 ~ 206 (389)
T 2gf3_A 206 S 206 (389)
T ss_dssp H
T ss_pred H
Confidence 4
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.59 E-value=1.4e-13 Score=139.63 Aligned_cols=77 Identities=12% Similarity=0.064 Sum_probs=58.6
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
....++...+.+.|.+.+++.|++++++++|+++..++++ .+.|.+.+ |+ ..+++||.||.|+|.+
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~------g~-------~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 143 STGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GFELDFGG------AE-------PMTLSCRVLINAAGLH 208 (369)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SEEEEECT------TS-------CEEEEEEEEEECCGGG
T ss_pred CCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eEEEEECC------Cc-------eeEEEeCEEEECCCcc
Confidence 3556888999999999999999999999999999876444 34466632 11 1479999999999988
Q ss_pred chhhHHHHHHc-CCC
Q psy14496 204 GHLSKQIIKKF-NLD 217 (561)
Q Consensus 204 s~~~~~l~~~~-g~~ 217 (561)
|. .+.+.+ |++
T Consensus 209 s~---~l~~~~~g~~ 220 (369)
T 3dme_A 209 AP---GLARRIEGIP 220 (369)
T ss_dssp HH---HHHHTEETSC
T ss_pred hH---HHHHHhcCCC
Confidence 74 344446 664
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.59 E-value=6.3e-14 Score=153.91 Aligned_cols=162 Identities=10% Similarity=0.019 Sum_probs=97.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc--eeecceeChh------hH-----------Hhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH--ILSGAIIDPR------SI-----------FEL 81 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~--~~~G~~~~~~------~l-----------~~l 81 (561)
..+||+|||||++|+++|+.|++. |++|+|||+...++.. ..+++.+.+. .+ .++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~ 336 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR------GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQ 336 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT------TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 9999999998765432 2223333221 11 111
Q ss_pred cccc-ccCCc--------cccccchhh---hhhhcCCC-Ccc----c---------CCCCCCceeecCCcEEeeHHHHHH
Q psy14496 82 FPKE-KLNKL--------FNTPVIEER---FLFLSSKK-SYK----I---------PSWILPICFKNHGNYIISLSDLVR 135 (561)
Q Consensus 82 ~~~~-~~~~~--------~~~~~~~~~---~~~~~~~~-~~~----~---------~~~~~p~~~~~~~~~~i~r~~l~~ 135 (561)
+..+ ..+.. +........ +..+...+ ... + +...............++...+.+
T Consensus 337 ~~~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~ 416 (689)
T 3pvc_A 337 YDQLLEQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTH 416 (689)
T ss_dssp HHHHHHTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHH
T ss_pred HHHhhhhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHH
Confidence 2211 00000 000001111 11111100 000 0 000000111123355678899999
Q ss_pred HHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCe-EEecCEEEEccCCCch
Q psy14496 136 WMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGM-ELYAKYTLFAEGSRGH 205 (561)
Q Consensus 136 ~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~-~i~ad~vV~AdG~~s~ 205 (561)
.|.+.+++.|++|+++++|+++..+++ . +.|.+.+ |. +++||.||+|+|.+|.
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~-v~V~t~~---------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDS-Q-WQLTFGQ---------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSS-S-EEEEEC----------------CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCC-e-EEEEeCC---------------CcEEEECCEEEECCCcchh
Confidence 999999999999999999999987644 3 4676632 44 6899999999999876
No 39
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.52 E-value=8.2e-13 Score=135.54 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=54.5
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
....++...+.+.|.+.+.+.|++++++++|+++..++ +. +.|.+.+ .+++||.||+|+|.+
T Consensus 146 ~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-v~v~t~~----------------g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 146 DGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDA-DG-VSVTTDR----------------GTYRAGKVVLACGPY 207 (397)
T ss_dssp TCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEESS----------------CEEEEEEEEECCGGG
T ss_pred CCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-Ce-EEEEECC----------------CEEEcCEEEEcCCcC
Confidence 34567888999999999999999999999999998753 33 3455521 379999999999987
Q ss_pred chhhHHHHHHcCC
Q psy14496 204 GHLSKQIIKKFNL 216 (561)
Q Consensus 204 s~~~~~l~~~~g~ 216 (561)
|. .+.+.++.
T Consensus 208 s~---~l~~~~g~ 217 (397)
T 2oln_A 208 TN---DLLEPLGA 217 (397)
T ss_dssp HH---HHHGGGTC
T ss_pred hH---HHhhhcCC
Confidence 54 23333554
No 40
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.51 E-value=9.7e-14 Score=144.63 Aligned_cols=156 Identities=23% Similarity=0.363 Sum_probs=96.5
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ecce----eChhhHHhhccccccCCcc-
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SGAI----IDPRSIFELFPKEKLNKLF- 91 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G~~----~~~~~l~~l~~~~~~~~~~- 91 (561)
+..|++||+|||||+|||++|+.|++. |++|+||||.+.++.... +|.. .+...+.+++..+.....+
T Consensus 22 ~~~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~ 95 (447)
T 2i0z_A 22 SNAMHYDVIVIGGGPSGLMAAIGAAEE------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFL 95 (447)
T ss_dssp ---CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGG
T ss_pred CccCCCCEEEECCcHHHHHHHHHHHHC------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHH
Confidence 556789999999999999999999999 999999999987764321 2211 0111111111111100000
Q ss_pred ----ccccchhhhhhhcCCCCcccCCCCCCceeecCCcEEe----eHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCC
Q psy14496 92 ----NTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYII----SLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKN 163 (561)
Q Consensus 92 ----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i----~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g 163 (561)
......+.+.|+...+ +.+. . ...+... ....+.+.|.+.+++.|++++++++|+++..+ ++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G-~~~~-------~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~ 165 (447)
T 2i0z_A 96 YSAFSIFNNEDIITFFENLG-VKLK-------E-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NG 165 (447)
T ss_dssp HHHHHHSCHHHHHHHHHHTT-CCEE-------E-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TT
T ss_pred HHHHHhcCHHHHHHHHHhcC-CceE-------E-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CC
Confidence 0011112223332211 1000 0 0012222 35788999999999999999999999999875 56
Q ss_pred CEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 164 NVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 164 ~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.+++|.+.+ |.+++||.||+|+|.+|
T Consensus 166 ~v~~V~~~~---------------G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 166 QTKAVILQT---------------GEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEEEEEETT---------------CCEEECSCEEECCCCSS
T ss_pred cEEEEEECC---------------CCEEECCEEEECCCCCc
Confidence 667787743 44699999999999999
No 41
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.47 E-value=1.9e-12 Score=135.03 Aligned_cols=74 Identities=11% Similarity=0.262 Sum_probs=57.4
Q ss_pred cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEc--------------CCCCEEEEEecccccccCCceecccccCeE
Q psy14496 125 NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYD--------------SKNNVCGIATNNFGINKEGIIKKNFQLGME 190 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~--------------~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~ 190 (561)
...++..++.+.|.+.+++.|++++++++|+++..+ +++.+++|.+.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 456788899999999999999999999999999862 245566777632 3 5
Q ss_pred E--ecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 191 L--YAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 191 i--~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
+ +||.||.|+|.+|. .+.+.+++.
T Consensus 239 i~~~Ad~VV~AtG~~s~---~l~~~~g~~ 264 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWSN---RLLNPLGID 264 (448)
T ss_dssp EEEEEEEEEECCGGGHH---HHHGGGTCC
T ss_pred EeecCCEEEECCCcCHH---HHHHHcCCC
Confidence 8 99999999998865 344445554
No 42
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.47 E-value=3.2e-13 Score=133.01 Aligned_cols=162 Identities=20% Similarity=0.323 Sum_probs=100.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+++||+|||||||||++|+.|++. .+|++|+|||+...+++....++.+ +..+. ......
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~GGg~~~~g~~--------~~~~~--------~~~~~~ 137 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAPGGGAWLGGQL--------FSAMV--------MRKPAD 137 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSCCTTTTCCBTT--------CCCEE--------EETTTH
T ss_pred CcCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCccCCccccCCcc--------chhhh--------cchHHH
Confidence 469999999999999999999985 3499999999998876432211100 00000 001111
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcE--EeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCC---------------
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNY--IISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSK--------------- 162 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~--~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~--------------- 162 (561)
.++...+ ++ +. ..+.+ ..+..++.+.|.+.+.+ .|++++.++.|+++..+++
T Consensus 138 ~~L~~~G---v~---~~----~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~ 207 (344)
T 3jsk_A 138 VFLDEVG---VP---YE----DEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAED 207 (344)
T ss_dssp HHHHHHT---CC---CE----ECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC---------------
T ss_pred HHHHHcC---Cc---cc----ccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccccc
Confidence 2221100 00 00 00122 22357888999999988 5999999999999987542
Q ss_pred -C--CEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHH
Q psy14496 163 -N--NVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKK 213 (561)
Q Consensus 163 -g--~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~ 213 (561)
+ ++.+|.+.+.....+|..+.. .++.+++|++||+|||..|.+++.+.++
T Consensus 208 ~g~~rV~GVv~~~~~v~~~g~~~~~-~d~~~i~Ak~VV~ATG~~s~v~~~~~~~ 260 (344)
T 3jsk_A 208 EAKVRIAGVVTNWTLVSMHHDDQSA-MDPNTINAPVIISTTGHDGPFGAFSVKR 260 (344)
T ss_dssp -CCEEEEEEEEEEHHHHTTSSSSSC-CBCEEEECSEEEECCCSSSSSSCHHHHH
T ss_pred CCCceEeEEEeeeeeeeccCCcccc-cCceEEEcCEEEECCCCCchhhHHHHHH
Confidence 3 677887643222222211111 1346899999999999999976665544
No 43
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.45 E-value=1.1e-11 Score=132.57 Aligned_cols=219 Identities=14% Similarity=0.115 Sum_probs=112.9
Q ss_pred EEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 126 YIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 126 ~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++...|...|.+.+.+.|++++++++|+++..+ ++++++|.+.+. .+|+ +.+++||.||.|+|.+|.
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~~s~ 233 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDR---LTDT-------THTIYAKKVVNAAGPWVD 233 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEEEEEEECCGGGHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEc---CCCc-------eEEEECCEEEECCCcchH
Confidence 36788999999999999999999999999999875 667788887541 1221 247999999999998874
Q ss_pred hhHHHHHHcCCCCCCCCccccceeEEEEeeCCCccCCCcEEEEeccCCCCCCCceEEEEEcCCCeEEEEEEec---CCCC
Q psy14496 206 LSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIIS---LDYK 282 (561)
Q Consensus 206 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~ig~~~~---~~~~ 282 (561)
.+.+..|.... .+....-|.. +.++.........+ .+ +.. ......|++|. ++.+.+|.... .+..
T Consensus 234 ---~l~~~~g~~~~-~~v~p~kG~~--lvl~~~~~~~~~~~-~~--~~~-~dgr~v~~iP~-~g~~~iGtT~~~~~~~~~ 302 (561)
T 3da1_A 234 ---TLREKDRSKHG-KYLKLSKGVH--LVVDQSRFPLRQAV-YF--DTE-SDGRMIFAIPR-EGKTYIGTTDTFYDKDIA 302 (561)
T ss_dssp ---HHHHTTTCCCS-SEEEEEEEEE--EEEEGGGSCCSSEE-EE--CCS-SSCCCEEEEEE-TTEEEECCCCEEECSCTT
T ss_pred ---HHHHhcCCCCC-ceEEeccEEE--EEECCccCCCceEE-Ee--ccC-CCCcEEEEEec-CCCEEEcCCCCccCCCcC
Confidence 22222454321 1111112222 22222111222221 11 110 11123577898 56777775431 1222
Q ss_pred CCCCChHHHHHHhhhChhHHHhh---c--CCeeeeecceeecc--CCCccCCeeecCCEEEEecCCccCCCcccccchHH
Q psy14496 283 NPYLSPFEEFQRYKTHPKICKIL---K--GGKRISYGARTITT--GGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTS 355 (561)
Q Consensus 283 ~~~~~~~~~~~~~~~~p~~~~~l---~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~lvGDAa~~~~P~~g~G~~~A 355 (561)
++..+. +.++.+.. .+..++ . ..+.+.......|. .+-......+.+.++..+ ..+.++-++|+ ++++
T Consensus 303 ~~~~t~-~~i~~ll~--~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~ 377 (561)
T 3da1_A 303 SPRMTV-EDRDYILA--AANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGY 377 (561)
T ss_dssp CCCCCH-HHHHHHHH--HHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTH
T ss_pred CCCCCH-HHHHHHHH--HHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhH
Confidence 334433 22222211 111222 1 23333332222221 100001122234444444 46788777777 7777
Q ss_pred HHHHHHHHHHHHHHHh
Q psy14496 356 IKSGILVADSIFKKIC 371 (561)
Q Consensus 356 i~~a~~lA~~l~~~l~ 371 (561)
-.-|..+++.+.+.+.
T Consensus 378 r~mAe~~~d~~~~~~~ 393 (561)
T 3da1_A 378 RKMAERTVDAVAQGLN 393 (561)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 7667777777777664
No 44
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.45 E-value=5.6e-12 Score=127.63 Aligned_cols=38 Identities=24% Similarity=0.381 Sum_probs=34.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
++++||+|||||++|+++|+.|++. |++|+|||+....
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~------G~~V~vle~~~~~ 41 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK------GYSVHILARDLPE 41 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCEEEEEeccCCC
Confidence 3568999999999999999999999 9999999998643
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.44 E-value=1.7e-13 Score=140.73 Aligned_cols=156 Identities=17% Similarity=0.214 Sum_probs=92.4
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ec-ceeC--h--hhHHhhccccc--cCC
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SG-AIID--P--RSIFELFPKEK--LNK 89 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G-~~~~--~--~~l~~l~~~~~--~~~ 89 (561)
|.+.++||+|||||||||++|+.|++. |++|+|||+.+.++.... +| +..+ . .....++.... ...
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~ 96 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKR------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKS 96 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHH
Confidence 334569999999999999999999999 999999999998765431 11 1100 0 00001110000 000
Q ss_pred ccccccchhhhhhhcCCCCcccCCCCCCceeecCC--cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEE
Q psy14496 90 LFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHG--NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCG 167 (561)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~ 167 (561)
.+......+.+.++...+ +... ....+ .....+..+.+.|.+.+++.|++++++++|+++..++++ +.
T Consensus 97 ~l~~~~~~~~~~~~~~~G-i~~~-------~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~ 166 (417)
T 3v76_A 97 ALARYRPQDFVALVERHG-IGWH-------EKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FR 166 (417)
T ss_dssp HHHHSCHHHHHHHHHHTT-CCEE-------ECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EE
T ss_pred HHHhcCHHHHHHHHHHcC-CCcE-------EeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EE
Confidence 000011112222222211 1000 00011 112456789999999999999999999999999875332 55
Q ss_pred EEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 168 IATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 168 V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
|.+.+ | +++||.||+|+|.+|.
T Consensus 167 V~~~~---------------g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 167 VTTSA---------------G-TVDAASLVVASGGKSI 188 (417)
T ss_dssp EEETT---------------E-EEEESEEEECCCCSSC
T ss_pred EEECC---------------c-EEEeeEEEECCCCccC
Confidence 66632 4 7999999999999983
No 46
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.44 E-value=4.2e-14 Score=137.26 Aligned_cols=41 Identities=27% Similarity=0.455 Sum_probs=38.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
|++||+|||||||||+||+.|+++ |++|+||||.+.+|+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcc
Confidence 789999999999999999999999 99999999999988754
No 47
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.42 E-value=1.2e-12 Score=140.47 Aligned_cols=171 Identities=16% Similarity=0.188 Sum_probs=104.3
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce-eecceeChh--h----------HHhhcccc
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI-LSGAIIDPR--S----------IFELFPKE 85 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~-~~G~~~~~~--~----------l~~l~~~~ 85 (561)
++.++||||||||+|||++|+.|++. |++|+||||.+.+++.. .+++.+... . .+.++..+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~ 191 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA------GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDA 191 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHH
Confidence 44679999999999999999999999 99999999999887643 233322110 0 11111111
Q ss_pred c-cCCccc------c--ccchhhhhhhcCCCCcccC------CCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEc
Q psy14496 86 K-LNKLFN------T--PVIEERFLFLSSKKSYKIP------SWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFS 150 (561)
Q Consensus 86 ~-~~~~~~------~--~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~ 150 (561)
. .+.... . ....+.+.|+... ++.+. ....+..... ....+....+.+.|.+.+++.|++|++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-Gv~~~~~~~~~g~~~~r~~~~-~~~~~~~~~l~~~L~~~~~~~gv~i~~ 269 (566)
T 1qo8_A 192 MKGGRQQNDIKLVTILAEQSADGVQWLESL-GANLDDLKRSGGARVDRTHRP-HGGKSSGPEIIDTLRKAAKEQGIDTRL 269 (566)
T ss_dssp HHHTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCEEECCTTCSSCCEEEC-SSSSCHHHHHHHHHHHHHHHTTCCEEC
T ss_pred HHhcCCCCCHHHHHHHHhccHHHHHHHHhc-CCccccccccCCCCCCceeec-CCCCCCHHHHHHHHHHHHHhcCCEEEe
Confidence 0 000000 0 0011223343321 11111 0111111110 011145778999999999999999999
Q ss_pred CceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhH
Q psy14496 151 GFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSK 208 (561)
Q Consensus 151 g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~ 208 (561)
+++|+++..++++++++|.+.+ .+|+. .+++||.||+|+|.+|..++
T Consensus 270 ~~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~A~~VVlAtGg~s~~~~ 316 (566)
T 1qo8_A 270 NSRVVKLVVNDDHSVVGAVVHG----KHTGY-------YMIGAKSVVLATGGYGMNKE 316 (566)
T ss_dssp SEEEEEEEECTTSBEEEEEEEE----TTTEE-------EEEEEEEEEECCCCCTTCHH
T ss_pred CCEEEEEEECCCCcEEEEEEEe----CCCcE-------EEEEcCEEEEecCCcccCHH
Confidence 9999999876437888887742 12221 26899999999999998744
No 48
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.41 E-value=2.8e-12 Score=131.91 Aligned_cols=166 Identities=14% Similarity=0.143 Sum_probs=91.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce-eecc-ee-ChhhH--------Hhhcccccc--
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI-LSGA-II-DPRSI--------FELFPKEKL-- 87 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~-~~G~-~~-~~~~l--------~~l~~~~~~-- 87 (561)
.++||+|||||++|+++|+.|++. .||++|+|||+....++.. .+++ .+ .+... .+.+..|..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~ 110 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGAL 110 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHh
Confidence 459999999999999999999998 5799999999986554321 1223 23 22110 001111110
Q ss_pred C----Cccccccchhhhh------hhcCCC-CcccCC-------CCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEE
Q psy14496 88 N----KLFNTPVIEERFL------FLSSKK-SYKIPS-------WILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIF 149 (561)
Q Consensus 88 ~----~~~~~~~~~~~~~------~~~~~~-~~~~~~-------~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~ 149 (561)
+ ..+...-....+. +++... ....+. ..............++...+.+.|.+.+.+.|++++
T Consensus 111 ~~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~ 190 (405)
T 3c4n_A 111 GSGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLL 190 (405)
T ss_dssp GSSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEE
Confidence 0 0000000000000 000000 000000 000111122335678899999999999999999999
Q ss_pred cCceEe---------EEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch-hhH
Q psy14496 150 SGFSAS---------EILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH-LSK 208 (561)
Q Consensus 150 ~g~~v~---------~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~-~~~ 208 (561)
++++|+ ++..+ ++.+ +|.+. +| +++||.||+|+|.+|. +.+
T Consensus 191 ~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~---------------~g-~i~a~~VV~A~G~~s~~l~~ 241 (405)
T 3c4n_A 191 LNTRAELVPGGVRLHRLTVT-NTHQ-IVVHE---------------TR-QIRAGVIIVAAGAAGPALVE 241 (405)
T ss_dssp CSCEEEEETTEEEEECBCC---------CBC---------------CE-EEEEEEEEECCGGGHHHHHH
T ss_pred cCCEEEeccccccccceEee-CCeE-EEEEC---------------Cc-EEECCEEEECCCccHHHHHH
Confidence 999998 77543 3333 45442 23 7999999999999983 444
No 49
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.41 E-value=1.5e-11 Score=111.24 Aligned_cols=114 Identities=28% Similarity=0.364 Sum_probs=82.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-... .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~------g~~v~lie~~~~~~~~~----------------~~----------------- 42 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA------GLKVLVLDGGRSKVKGV----------------SR----------------- 42 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCTTTTC----------------SC-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCcccCc----------------hh-----------------
Confidence 7999999999999999999999 99999999986321100 00
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
+.. .+. +|. .+....+.+.+.+.+++.|++++.+ +|+++..++++ +.|.+.
T Consensus 43 ~~~-----~~~--~~~--------~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~----------- 93 (180)
T 2ywl_A 43 VPN-----YPG--LLD--------EPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETE----------- 93 (180)
T ss_dssp CCC-----STT--CTT--------CCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECS-----------
T ss_pred hhc-----cCC--CcC--------CCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEEC-----------
Confidence 000 000 010 1445678889999999999999999 99999865333 345542
Q ss_pred cccccCeEEecCEEEEccCCCchhhHH
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRGHLSKQ 209 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s~~~~~ 209 (561)
+| ++++|.||.|+|.++.+++.
T Consensus 94 ----~g-~i~ad~vI~A~G~~~~~~~~ 115 (180)
T 2ywl_A 94 ----EG-VEKAERLLLCTHKDPTLPSL 115 (180)
T ss_dssp ----SC-EEEEEEEEECCTTCCHHHHH
T ss_pred ----CC-EEEECEEEECCCCCCCcccc
Confidence 35 79999999999999865444
No 50
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.40 E-value=2.3e-12 Score=136.01 Aligned_cols=172 Identities=18% Similarity=0.259 Sum_probs=100.8
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceee--c----ceeChhhHHhh----ccccccC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS--G----AIIDPRSIFEL----FPKEKLN 88 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~--G----~~~~~~~l~~l----~~~~~~~ 88 (561)
..+.+||+|||||||||++|+.|++. |++|+|||+.+.++.+... + ..+++.....+ ...|..+
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdg 177 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQM------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDG 177 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHT------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCC
Confidence 34569999999999999999999999 9999999998765332110 0 00000000000 0000000
Q ss_pred Ccccccc------chhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCC
Q psy14496 89 KLFNTPV------IEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSK 162 (561)
Q Consensus 89 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~ 162 (561)
. +.... ....+.++...+ .+....... ...........+.+.|.+.+++.|++++++++|+++..+ +
T Consensus 178 k-l~~~i~~~~~~~~~v~~~~~~~G---~~~~i~~~~--~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~ 250 (549)
T 3nlc_A 178 K-LYSQVKDPNFYGRKVITEFVEAG---APEEILYVS--KPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-D 250 (549)
T ss_dssp C-CCCCSCCTTCHHHHHHHHHHHTT---CCGGGGTBS--SCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-S
T ss_pred c-eEEEeccccccHHHHHHHHHHcC---CCceEeecc--ccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-C
Confidence 0 00000 001111111100 000000000 000112345788889999999999999999999999875 5
Q ss_pred CCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHcCCCC
Q psy14496 163 NNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDN 218 (561)
Q Consensus 163 g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~~ 218 (561)
+.+++|.+.+ |.+++||.||+|+|.+|.....+....|+..
T Consensus 251 ~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 251 GQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp SBEEEEEETT---------------SCEEECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred CEEEEEEECC---------------CCEEECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 6677788743 5689999999999999963334555677764
No 51
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.40 E-value=3.1e-11 Score=127.73 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
..|.+.|.+.+++.|++|+++++|++|+.+ ++++++|++.+ |.++.||.||.+.+.....
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLED---------------GRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------SCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecC---------------CcEEEcCEEEECCCHHHHH
Confidence 478888999999999999999999999886 77888998854 6789999999988876654
No 52
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.40 E-value=5.1e-11 Score=125.84 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=53.8
Q ss_pred EEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 126 YIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 126 ~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++...+...|.+.+.+.|++++.+++|+++..+ + .+++|.+.+. .+|+. .+++||.||.|+|.+|.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~---~~G~~-------~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDI---DTGKK-------YSWQARGLVNATGPWVK 211 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEET---TTCCE-------EEEEESCEEECCGGGHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEEC---CCCCE-------EEEECCEEEECCChhHH
Confidence 45789999999999999999999999999999875 3 5677877421 11210 27999999999998875
No 53
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.39 E-value=4.6e-12 Score=131.77 Aligned_cols=67 Identities=18% Similarity=0.326 Sum_probs=57.2
Q ss_pred CCc-EEeeHHHHHHHHHHHHHHCCCEEEcCc---eEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEE
Q psy14496 123 HGN-YIISLSDLVRWMGKKAENMGIDIFSGF---SASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLF 198 (561)
Q Consensus 123 ~~~-~~i~r~~l~~~L~~~a~~~gv~i~~g~---~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~ 198 (561)
... ..++...+.+.|.+.+++.|++|++++ +|+++..+ ++.+.+|.+.+ |.+++||.||+
T Consensus 152 ~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~---------------G~~i~Ad~VV~ 215 (438)
T 3dje_A 152 RSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTAD---------------GKIWRAERTFL 215 (438)
T ss_dssp SSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETT---------------TEEEECSEEEE
T ss_pred CCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECC---------------CCEEECCEEEE
Confidence 345 678888999999999999999999999 99999875 56777788843 55899999999
Q ss_pred ccCCCch
Q psy14496 199 AEGSRGH 205 (561)
Q Consensus 199 AdG~~s~ 205 (561)
|+|.+|.
T Consensus 216 AtG~~s~ 222 (438)
T 3dje_A 216 CAGASAG 222 (438)
T ss_dssp CCGGGGG
T ss_pred CCCCChh
Confidence 9999876
No 54
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.39 E-value=1.1e-12 Score=128.61 Aligned_cols=161 Identities=22% Similarity=0.282 Sum_probs=98.6
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
..+||+|||||||||++|+.|++. .||++|+|+|+.+.+|+....++.+. ... .......
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~----~~g~~V~v~e~~~~~ggg~~~~g~~~--------~~~--------~~~~~~~ 123 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLF--------SAM--------VMRKPAH 123 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCGGGC--------CCE--------EEETTTH
T ss_pred CcCCEEEECccHHHHHHHHHHHhc----CCCCeEEEEecCccccccccccCccc--------chh--------hhhhHHH
Confidence 346999999999999999999987 46899999999988865332221110 000 0001111
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEE--eeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcC--C-C--CEEEEEecc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYI--ISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDS--K-N--NVCGIATNN 172 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~--i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~--~-g--~v~~V~~~~ 172 (561)
.++...+ ++ +.. .+.+. .+...+.+.|.+.+.+ .|++++.+++|+++..++ + + ++.||.+.+
T Consensus 124 ~~L~~~G---v~---~~~----~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 124 LFLQELE---IP---YED----EGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp HHHHHTT---CC---CEE----CSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred HHHHhhC---cc---ccc----CCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 2222110 00 000 01222 2457788999998887 499999999999998764 3 5 888998754
Q ss_pred cccccCCceecccccCeEEec---------------CEEEEccCCCchhhHHHHH
Q psy14496 173 FGINKEGIIKKNFQLGMELYA---------------KYTLFAEGSRGHLSKQIIK 212 (561)
Q Consensus 173 ~~~~~~g~~~~~f~~g~~i~a---------------d~vV~AdG~~s~~~~~l~~ 212 (561)
.....+|....+ .++.++.| |+||+|+|..|.+.+.+.+
T Consensus 194 ~~v~~~g~~~~~-~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~ 247 (326)
T 2gjc_A 194 TLVTQAHGTQCC-MDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAK 247 (326)
T ss_dssp HHHHTC---CCC-CCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHH
T ss_pred eeecccccceec-cCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHh
Confidence 322223311111 13467999 9999999999887665543
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.38 E-value=5e-12 Score=135.82 Aligned_cols=169 Identities=18% Similarity=0.181 Sum_probs=101.3
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce-eecceeC-hh-hH----------Hhhccccc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI-LSGAIID-PR-SI----------FELFPKEK 86 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~-~~G~~~~-~~-~l----------~~l~~~~~ 86 (561)
..++||||||||+|||++|+.|++. |++|+||||.+.+++.. .+++.+. +. .+ +.++..+.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~ 197 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS------GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTM 197 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHH
Confidence 3468999999999999999999999 99999999999887643 2332221 10 01 11111110
Q ss_pred -cCCcccc--------ccchhhhhhhcCCCCcccC------CCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcC
Q psy14496 87 -LNKLFNT--------PVIEERFLFLSSKKSYKIP------SWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSG 151 (561)
Q Consensus 87 -~~~~~~~--------~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g 151 (561)
.+..... ......+.|+... ++.+. ....+...... ........+.+.|.+.+.+.|++|+++
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~g~~~~r~~~~~-~g~~~g~~l~~~L~~~~~~~gv~i~~~ 275 (571)
T 1y0p_A 198 KGGQNINDPALVKVLSSHSKDSVDWMTAM-GADLTDVGMMGGASVNRAHRPT-GGAGVGAHVVQVLYDNAVKRNIDLRMN 275 (571)
T ss_dssp HHTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCEEECCTTCSSCCEEEST-TTCCHHHHHHHHHHHHHHHTTCEEESS
T ss_pred HhcCCCCCHHHHHHHHHccHHHHHHHHhc-CCCCccCcccCCcCCCeeEecC-CCCCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 0000000 0011223333321 11111 00111111000 001345789999999999999999999
Q ss_pred ceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhh
Q psy14496 152 FSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLS 207 (561)
Q Consensus 152 ~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~ 207 (561)
++|+++..++++++++|.+.+ .+|+. .+++||.||+|+|.+|..+
T Consensus 276 ~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 276 TRGIEVLKDDKGTVKGILVKG----MYKGY-------YWVKADAVILATGGFAKNN 320 (571)
T ss_dssp EEEEEEEECTTSCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH
T ss_pred CEeeEeEEcCCCeEEEEEEEe----CCCcE-------EEEECCeEEEeCCCcccCH
Confidence 999999886447888887742 12221 2689999999999999854
No 56
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.37 E-value=5.5e-11 Score=133.39 Aligned_cols=75 Identities=19% Similarity=0.233 Sum_probs=59.4
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
....++...+.+.|.+.+.+.|++++.+++|+++..+ ++.+++|.+.+ | +++||.||.|+|.+
T Consensus 144 ~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 144 SDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTAD---------------G-VIPADIVVSCAGFW 206 (830)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------E-EEECSEEEECCGGG
T ss_pred CCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECC---------------c-EEECCEEEECCccc
Confidence 3566789999999999999999999999999999875 55666777742 3 79999999999998
Q ss_pred chhhHHHHHHcCCCC
Q psy14496 204 GHLSKQIIKKFNLDN 218 (561)
Q Consensus 204 s~~~~~l~~~~g~~~ 218 (561)
|. .+.+.+|+..
T Consensus 207 s~---~l~~~~g~~~ 218 (830)
T 1pj5_A 207 GA---KIGAMIGMAV 218 (830)
T ss_dssp HH---HHHHTTTCCC
T ss_pred hH---HHHHHhCCCc
Confidence 75 3333355543
No 57
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.35 E-value=7.4e-12 Score=122.06 Aligned_cols=149 Identities=21% Similarity=0.326 Sum_probs=94.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ecceeChhhHHhhccccccCCccccccchhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
.++||+||||||+||++|+.|++. +|++|+||||.+.+++... ++..+.. +. .....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~gg~~~~~~~~~~~---------~~--------~~~~~ 95 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSPGGGAWLGGQLFSA---------MI--------VRKPA 95 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSCCTTTTCCSTTCCC---------EE--------EETTT
T ss_pred cccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCceecCCcchHH---------HH--------cCcHH
Confidence 468999999999999999999983 1899999999987764321 1211110 00 00001
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEe--eHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEeccc---
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYII--SLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNF--- 173 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i--~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~--- 173 (561)
..++... .++ +. ..+.+.+ ++..+...|.+.+.+ .|++++++++|+++..+ ++++.+|.+.+.
T Consensus 96 ~~~l~~~---G~~---~~----~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 96 HLFLDEI---GVA---YD----EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVA 164 (284)
T ss_dssp HHHHHHH---TCC---CE----ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHH
T ss_pred HHHHHHc---CCC---cc----cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccc
Confidence 1122110 011 00 0122323 677888899988876 69999999999999875 556667776321
Q ss_pred -c--cccCCceecccccCeEEecCEEEEccCCCchhhHH
Q psy14496 174 -G--INKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQ 209 (561)
Q Consensus 174 -~--~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~ 209 (561)
. ...+|+ ..+++||.||+|+|.+|.++..
T Consensus 165 ~~~~~g~~g~-------~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 165 QNHHTQSCMD-------PNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp TCTTTSSCCC-------CEEEEEEEEEECCCSSSTTTTH
T ss_pred cccCccccCc-------eEEEECCEEEECCCCchHHHHH
Confidence 0 000111 2579999999999999987544
No 58
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.35 E-value=4.2e-12 Score=134.49 Aligned_cols=63 Identities=21% Similarity=0.270 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecC-EEEEccCCCchh
Q psy14496 132 DLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK-YTLFAEGSRGHL 206 (561)
Q Consensus 132 ~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad-~vV~AdG~~s~~ 206 (561)
.+.+.|.+.+++.|++|+++++|+++..++++++++|.+.+ +|+ ..+++|| .||+|+|..|.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~-------~~~i~A~k~VVlAtGG~~~n 266 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGK-------EVAVRARRGVVLATGSFAYN 266 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTE-------EEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCc-------EEEEEeCCeEEEeCCChhhC
Confidence 78999999999999999999999999986578999998743 121 1368995 999999999864
No 59
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.33 E-value=4.6e-12 Score=119.68 Aligned_cols=125 Identities=21% Similarity=0.223 Sum_probs=85.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+++||+||||||+|+++|+.|++. |.+|+|||+.....+ .. .++. +..+. ...-+
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~------g~~v~lie~~~~~~G-~~----~~~~-----~~~~~---------~~~~~ 56 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK------GVRVGLLTQSLDAVM-MP----FLPP-----KPPFP---------PGSLL 56 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTT-CC----SSCC-----CSCCC---------TTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCcCC-cc----cCcc-----ccccc---------hhhHH
Confidence 569999999999999999999999 999999999843211 10 0100 00000 00000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
..+++ ..+. ++..+.+.|.+.+++. |++++ +++|+++..+ ++.+++|.+.+
T Consensus 57 ~~~~d----------------~~g~---~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~------- 108 (232)
T 2cul_A 57 ERAYD----------------PKDE---RVWAFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWE------- 108 (232)
T ss_dssp HHHCC----------------TTCC---CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETT-------
T ss_pred hhhcc----------------CCCC---CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECC-------
Confidence 00110 0011 6778999999999886 99998 5699999875 45666777642
Q ss_pred ceecccccCeEEecCEEEEccCCCchh
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
|.++++|.||+|+|.+|..
T Consensus 109 --------g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 109 --------GPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp --------SCCEECSEEEECCTTCSSC
T ss_pred --------CCEEECCEEEECCCCChhh
Confidence 4579999999999998774
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.32 E-value=6.2e-12 Score=126.65 Aligned_cols=130 Identities=18% Similarity=0.349 Sum_probs=88.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
++||+||||||||+++|+.|++. |++|+|||+.+.+|+.... .++... +... ..+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~vie~~~~~gg~~~~-----------~~~~~~----~~~~---~~~- 57 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS------GLSYVILDAEASPGGAWQH-----------AWHSLH----LFSP---AGW- 57 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS------SCCEEEECCSSSSSGGGGG-----------SCTTCB----CSSC---GGG-
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcccC-----------CCCCcE----ecCc---hhh-
Confidence 58999999999999999999999 9999999999887653211 001000 0000 000
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEE-EEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCG-IATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~-V~~~~~~~~~~g~ 180 (561)
..++.+..+. .......+..+.+.|.+.+++.|++++++++|+++..+ ++ .+. |.+.
T Consensus 58 -------~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~-~~~~v~~~--------- 115 (357)
T 4a9w_A 58 -------SSIPGWPMPA----SQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GE-RLRVVARD--------- 115 (357)
T ss_dssp -------SCCSSSCCCC----CSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TT-EEEEEETT---------
T ss_pred -------hhCCCCCCCC----CccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CC-cEEEEEeC---------
Confidence 0011111111 11223567899999999999999999999999999875 33 233 6553
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+| ++++|.||+|+|.+|.
T Consensus 116 ------~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 116 ------GR-QWLARAVISATGTWGE 133 (357)
T ss_dssp ------SC-EEEEEEEEECCCSGGG
T ss_pred ------CC-EEEeCEEEECCCCCCC
Confidence 24 7999999999998764
No 61
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.32 E-value=2.2e-11 Score=123.63 Aligned_cols=64 Identities=17% Similarity=0.160 Sum_probs=52.3
Q ss_pred CcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 124 GNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 124 ~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
....++...+.+.|.+.+.+.|++++.+++|+++..+++ . +.|++.+ | +++||.||+|+|.+
T Consensus 142 ~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~-~~v~~~~---------------g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 142 DSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-G-VTIETAD---------------G-EYQAKKAIVCAGTW 203 (372)
T ss_dssp SCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-S-EEEEESS---------------C-EEEEEEEEECCGGG
T ss_pred CCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-E-EEEEECC---------------C-eEEcCEEEEcCCcc
Confidence 356688899999999999999999999999999987533 3 4566532 3 59999999999988
Q ss_pred ch
Q psy14496 204 GH 205 (561)
Q Consensus 204 s~ 205 (561)
|.
T Consensus 204 s~ 205 (372)
T 2uzz_A 204 VK 205 (372)
T ss_dssp GG
T ss_pred HH
Confidence 75
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.32 E-value=6.8e-12 Score=128.35 Aligned_cols=153 Identities=17% Similarity=0.247 Sum_probs=91.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ec-cee---Chh-hHHhhccccc--cCCccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SG-AII---DPR-SIFELFPKEK--LNKLFN 92 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G-~~~---~~~-~l~~l~~~~~--~~~~~~ 92 (561)
.++||+||||||||+++|+.|++. |.+|+||||.+.++.... +| +.. +.. .....+.... ....+.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~ 76 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALA 76 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHH
Confidence 359999999999999999999999 999999999987765432 11 110 000 0001110000 000000
Q ss_pred cccchhhhhhhcCCCCcccCCCCCCceeecCCcEEe---eHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcC---CCCEE
Q psy14496 93 TPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYII---SLSDLVRWMGKKAENMGIDIFSGFSASEILYDS---KNNVC 166 (561)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i---~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~---~g~v~ 166 (561)
.....+.+.++...+ +.... . ..+... .+..+.+.|.+.+++.|++++++++|+++..++ ++. +
T Consensus 77 ~~~~~~~~~~~~~~G-i~~~~-------~-~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~ 146 (401)
T 2gqf_A 77 RYTNWDFISLVAEQG-ITYHE-------K-ELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-F 146 (401)
T ss_dssp HSCHHHHHHHHHHTT-CCEEE-------C-STTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-E
T ss_pred hCCHHHHHHHHHhCC-CceEE-------C-cCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-E
Confidence 000111122222111 11100 0 011112 567888999999999999999999999998652 222 4
Q ss_pred EEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 167 GIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 167 ~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.|.+.+ | +++||.||+|+|.+|.
T Consensus 147 ~v~~~~---------------g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 147 VLQVNS---------------T-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp EEEETT---------------E-EEEESEEEECCCCSSC
T ss_pred EEEECC---------------C-EEECCEEEECCCCccC
Confidence 565532 3 7999999999999983
No 63
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.27 E-value=3.5e-11 Score=121.18 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=42.5
Q ss_pred cEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 125 NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 125 ~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
...++...+.+.|.+.+++.|++++. ++|+++... ..++||.||.|+|.+|
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV----------------------------AREGADVIVNCTGVWA 186 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh----------------------------hcCCCCEEEECCCcCh
Confidence 46789999999999999999999988 777665321 1267999999999988
Q ss_pred h
Q psy14496 205 H 205 (561)
Q Consensus 205 ~ 205 (561)
.
T Consensus 187 ~ 187 (351)
T 3g3e_A 187 G 187 (351)
T ss_dssp G
T ss_pred H
Confidence 6
No 64
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.26 E-value=4.8e-11 Score=125.12 Aligned_cols=48 Identities=29% Similarity=0.533 Sum_probs=37.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
.|.+||+|||||++||++|+.|++...++.|+++|+|||+.+.+|+..
T Consensus 3 ~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 3 DGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 356899999999999999999999910011229999999998888754
No 65
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.26 E-value=4.8e-11 Score=127.95 Aligned_cols=174 Identities=17% Similarity=0.179 Sum_probs=102.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCcee-ecceeC-hh-----------hHHhhccccc-
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SGAIID-PR-----------SIFELFPKEK- 86 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~-~G~~~~-~~-----------~l~~l~~~~~- 86 (561)
..+||+|||||+|||++|+.|++. |++|+||||.+.+++... +++.+. +. ..+.++..+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~------g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA------GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS------SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 468999999999999999999999 999999999998876532 222221 00 0011111110
Q ss_pred cCCcccc--------ccchhhhhhhcCCCCcccC------CCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCc
Q psy14496 87 LNKLFNT--------PVIEERFLFLSSKKSYKIP------SWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGF 152 (561)
Q Consensus 87 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~ 152 (561)
.+..... ......+.|+... ++.+. ....+...... ........+.+.|.+.+++.||+|++++
T Consensus 199 ~g~~~~~~~~v~~~~~~~~~~i~~l~~~-Gv~~~~~~~~gg~~~~r~~~~~-~~~~~g~~l~~~L~~~~~~~gv~i~~~t 276 (572)
T 1d4d_A 199 GGRNINDPELVKVLANNSSDSIDWLTSM-GADMTDVGRMGGASVNRSHRPT-GGAGVGAHVAQVLWDNAVKRGTDIRLNS 276 (572)
T ss_dssp HTTTCSCHHHHHHHHHTHHHHHHHHHHH-TCCCCEEECCTTCSSCCEEEST-TTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred hcCCCCCHHHHHHHHHccHHHHHHHHhc-CCccccccccCCCcCCeeEecC-CCCCCHHHHHHHHHHHHHHcCCeEEecC
Confidence 0000000 0011223333321 11110 00111111100 1113456889999999999999999999
Q ss_pred eEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhhHHHHHHc
Q psy14496 153 SASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKF 214 (561)
Q Consensus 153 ~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~ 214 (561)
+|+++..++++++++|.+.+ .+|+. .+++||.||+|+|.+|..+ ++...+
T Consensus 277 ~v~~l~~~~~g~v~GV~~~~----~~G~~-------~~i~A~~VVlAtGg~~~~~-~~~~~~ 326 (572)
T 1d4d_A 277 RVVRILEDASGKVTGVLVKG----EYTGY-------YVIKADAVVIAAGGFAKNN-ERVSKY 326 (572)
T ss_dssp EEEEEEEC--CCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH-HHHHHH
T ss_pred EEEEEEECCCCeEEEEEEEe----CCCcE-------EEEEcCEEEEeCCCCccCH-HHHHHh
Confidence 99999876337888888742 12221 3689999999999999864 344334
No 66
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.25 E-value=1.8e-11 Score=130.08 Aligned_cols=150 Identities=20% Similarity=0.252 Sum_probs=91.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC-CCCCcee--ecceeChhhHHhhccccccCCccccccch
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS-ELGAHIL--SGAIIDPRSIFELFPKEKLNKLFNTPVIE 97 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~-~~g~~~~--~G~~~~~~~l~~l~~~~~~~~~~~~~~~~ 97 (561)
.++||+|||||+||+++|+.|++. |.+|+|||+.. ..+.... +-+.+....+.+.+..+. ..+......
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~alg--g~~~~~~d~ 98 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALG--GLMAKAIDQ 98 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTT--CSHHHHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhc--cHHHHHhhh
Confidence 369999999999999999999999 99999999984 3332110 001111111111111111 000000000
Q ss_pred hh--hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccc
Q psy14496 98 ER--FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFG 174 (561)
Q Consensus 98 ~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~ 174 (561)
.. +..+.... -|.. ......+++..+.+.|.+.+++ .|++++ +..|+++..+ ++.+++|.+.+
T Consensus 99 ~gi~f~~l~~~k--------gpav--~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~d-- 164 (651)
T 3ces_A 99 AGIQFRILNASK--------GPAV--RATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQM-- 164 (651)
T ss_dssp HEEEEEEESTTS--------CGGG--CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETT--
T ss_pred cccchhhhhccc--------Cccc--ccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECC--
Confidence 00 11111000 0000 0012468888999999999988 699994 6789999775 66788888743
Q ss_pred cccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 175 INKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 175 ~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
|.+++||.||+|+|.+|.
T Consensus 165 -------------G~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 165 -------------GLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp -------------SEEEEEEEEEECCSTTTC
T ss_pred -------------CCEEECCEEEEcCCCCcc
Confidence 568999999999999764
No 67
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.24 E-value=3.8e-11 Score=127.50 Aligned_cols=140 Identities=19% Similarity=0.305 Sum_probs=93.5
Q ss_pred CCcccEEEECchhHHHHHHHHHH-hccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLK-QLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La-~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
++++||+|||||+||+++|+.|+ +. |++|+|||+.+.+|+..... .++... ...+....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~------G~~v~viE~~~~~GGtw~~~----------~ypg~~----~d~~s~~~ 65 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHEL------GLTTVGFDKADGPGGTWYWN----------RYPGAL----SDTESHLY 65 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTT------CCCEEEEESSSSSCTHHHHC----------CCTTCE----EEEEGGGS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcC------CCCEEEEECCCCCCCccccc----------CCCCce----ecCCccee
Confidence 35689999999999999999999 88 99999999998877532110 001000 00000000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCC--EEEcCceEeEEEEcCCCCEEEEEecccccc
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGI--DIFSGFSASEILYDSKNNVCGIATNNFGIN 176 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv--~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~ 176 (561)
.+.+ ... ....+ ........+.++.+.|.+.+++.|+ +++++++|+++..++++..+.|.+.+
T Consensus 66 ~~~~---~~~-~~~~~-------~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~---- 130 (540)
T 3gwf_A 66 RFSF---DRD-LLQES-------TWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH---- 130 (540)
T ss_dssp SCCS---CHH-HHHHC-------CCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT----
T ss_pred eecc---ccc-cccCC-------CCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC----
Confidence 0000 000 00000 0113347788999999999999888 89999999999887665667777743
Q ss_pred cCCceecccccCeEEecCEEEEccCCCch
Q psy14496 177 KEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 177 ~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
|.++++|.||+|+|..|.
T Consensus 131 -----------G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 131 -----------GEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp -----------SCEEEEEEEEECCCSCCS
T ss_pred -----------CCEEEeCEEEECCccccc
Confidence 568999999999998664
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.24 E-value=2.5e-11 Score=129.04 Aligned_cols=158 Identities=17% Similarity=0.218 Sum_probs=90.6
Q ss_pred cCCCCCCCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC-CCCCcee---ecceeChhhHHhhcccccc
Q psy14496 12 INKYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS-ELGAHIL---SGAIIDPRSIFELFPKEKL 87 (561)
Q Consensus 12 ~~~~~~~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~-~~g~~~~---~G~~~~~~~l~~l~~~~~~ 87 (561)
++...+..++.|||+|||||+||+++|+.|++. |.+|+|+|+.. .++.... .|+. ....+.+.+..+.
T Consensus 11 ~~~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~c~ps~gGi-a~~~lv~el~al~- 82 (641)
T 3cp8_A 11 SSGLVPRGSHMYDVIVVGAGHAGCEAALAVARG------GLHCLLITSDLSAVARMSCNPAIGGV-AKGQITREIDALG- 82 (641)
T ss_dssp ---------CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSCSEEECH-HHHHHHHHHHHHT-
T ss_pred cCCccccccCcCCEEEECccHHHHHHHHHHHHC------CCcEEEEEecccccCCCccccchhhh-hHHHHHHHHHhcc-
Confidence 334445666789999999999999999999999 99999999985 2332111 1111 1011111111111
Q ss_pred CCccccccchhhhh--hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCC
Q psy14496 88 NKLFNTPVIEERFL--FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNN 164 (561)
Q Consensus 88 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~ 164 (561)
...........+. .+.... .+. .. .....+++..+.+.|.+.+++ .|++++. ..|+++..+ ++.
T Consensus 83 -g~~~~~~d~~gi~f~~l~~~k---gpa--v~-----~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d-~g~ 149 (641)
T 3cp8_A 83 -GEMGKAIDATGIQFRMLNRSK---GPA--MH-----SPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSAN-SGK 149 (641)
T ss_dssp -CSHHHHHHHHEEEEEEECSSS---CTT--TC-----EEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEE-TTE
T ss_pred -cHHHHHHHhcCCchhhccccc---Ccc--cc-----chhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEec-CCE
Confidence 0000000000010 111000 000 00 013468899999999999987 5999965 489888764 566
Q ss_pred EEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 165 VCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 165 v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.+|.+.+ |.+++||.||+|+|.++.
T Consensus 150 V~GV~t~~---------------G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 150 FSSVTVRS---------------GRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEEEEETT---------------SCEEEEEEEEECCTTCBT
T ss_pred EEEEEECC---------------CcEEEeCEEEECcCCCCC
Confidence 77787743 458999999999998754
No 69
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.24 E-value=4.6e-11 Score=127.07 Aligned_cols=142 Identities=19% Similarity=0.361 Sum_probs=92.4
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccch
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIE 97 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~ 97 (561)
+.++.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+.... ..++... ...+...
T Consensus 17 ~~~~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GGtw~~----------~~ypg~~----~dv~s~~ 76 (549)
T 4ap3_A 17 TGTTSYDVVVVGAGIAGLYAIHRFRSQ------GLTVRAFEAASGVGGVWYW----------NRYPGAR----CDVESID 76 (549)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHH----------CCCTTCB----CSSCTTT
T ss_pred CCCCCCCEEEECchHHHHHHHHHHHhC------CCCEEEEeCCCCCCCcccc----------CCCCCce----eCCCchh
Confidence 344579999999999999999999999 9999999999888753210 0011100 0000000
Q ss_pred hhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCC--EEEcCceEeEEEEcCCCCEEEEEeccccc
Q psy14496 98 ERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGI--DIFSGFSASEILYDSKNNVCGIATNNFGI 175 (561)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv--~i~~g~~v~~i~~~~~g~v~~V~~~~~~~ 175 (561)
..+.+.. . ....+. .......+.++.+.|.+.+++.|+ +++++++|+++..+++...+.|.+.+
T Consensus 77 y~~~f~~---~-~~~~~~-------~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~--- 142 (549)
T 4ap3_A 77 YSYSFSP---E-LEQEWN-------WSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR--- 142 (549)
T ss_dssp SSCCSCH---H-HHHHCC-------CSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---
T ss_pred ccccccc---c-cccCCC-------CccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---
Confidence 0000000 0 000000 112235678899999999988887 89999999999887666667777743
Q ss_pred ccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 176 NKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 176 ~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
|.++++|+||+|+|..|.
T Consensus 143 ------------G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 143 ------------GDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp ------------CCEEEEEEEEECCCSEEE
T ss_pred ------------CCEEEeCEEEECcCCCCC
Confidence 568999999999997654
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.23 E-value=4.8e-11 Score=120.61 Aligned_cols=122 Identities=24% Similarity=0.352 Sum_probs=87.2
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
++.+||+|||||||||++|+.|++. |++|+|||+.+.+|+... ..++...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~-----------~~~~~~~------------- 61 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN------NISCRIIESMPQLGGQLA-----------ALYPEKH------------- 61 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HTCTTSE-------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccc-----------ccCCCcc-------------
Confidence 3469999999999999999999999 999999999887754210 0000000
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
....+. ++ .+.+..+.+.|.+.+.+.|++++++++|+++..++++ .+.|.+.
T Consensus 62 --------~~~~~~--~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~-------- 113 (360)
T 3ab1_A 62 --------IYDVAG--FP---------EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDG-TFETRTN-------- 113 (360)
T ss_dssp --------ECCSTT--CS---------SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTS-CEEEEET--------
T ss_pred --------cccCCC--CC---------CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCc-eEEEEEC--------
Confidence 000010 01 2567788899999998889999999999999875332 3445553
Q ss_pred ceecccccCeEEecCEEEEccCCCchh
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++++|.||+|+|.+|..
T Consensus 114 -------~g~~~~~~~li~AtG~~~~~ 133 (360)
T 3ab1_A 114 -------TGNVYRSRAVLIAAGLGAFE 133 (360)
T ss_dssp -------TSCEEEEEEEEECCTTCSCC
T ss_pred -------CCcEEEeeEEEEccCCCcCC
Confidence 24589999999999997643
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.23 E-value=2.7e-11 Score=128.30 Aligned_cols=150 Identities=19% Similarity=0.260 Sum_probs=91.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC-CCCCcee--ecceeChhhHHhhccccccCCccccccch
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS-ELGAHIL--SGAIIDPRSIFELFPKEKLNKLFNTPVIE 97 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~-~~g~~~~--~G~~~~~~~l~~l~~~~~~~~~~~~~~~~ 97 (561)
..+||+|||||+||+++|+.|++. |.+|+|||+.. ..+.... +-+.+....+.+.+..+ +.......+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldal--gg~~~~~~d~ 97 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDAL--GGEMGKAIDQ 97 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHH--TCSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHh--hhHHHHHhhh
Confidence 359999999999999999999999 99999999984 3332111 00111111111111111 0000000000
Q ss_pred hhh--hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccc
Q psy14496 98 ERF--LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFG 174 (561)
Q Consensus 98 ~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~ 174 (561)
..+ ..+..... |.. ......+++..+.+.|.+.+++ .|++++ +..|+++..+ ++++.+|.+.+
T Consensus 98 ~gi~f~~l~~~kG--------pav--~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~d-- 163 (637)
T 2zxi_A 98 TGIQFKMLNTRKG--------KAV--QSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNL-- 163 (637)
T ss_dssp HEEEEEEESTTSC--------GGG--CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETT--
T ss_pred cccceeecccccC--------ccc--cchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECC--
Confidence 000 01110000 000 0013467889999999999988 699995 6789999775 67788888743
Q ss_pred cccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 175 INKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 175 ~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
|.++.||.||+|+|.++.
T Consensus 164 -------------G~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 164 -------------GVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp -------------SCEEECSEEEECCTTCBT
T ss_pred -------------CcEEEeCEEEEccCCCcc
Confidence 568999999999998753
No 72
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.23 E-value=6.6e-11 Score=126.98 Aligned_cols=170 Identities=18% Similarity=0.202 Sum_probs=97.2
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce-e-eccee---Ch---hhHHhhccccc-cCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI-L-SGAII---DP---RSIFELFPKEK-LNKL 90 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~-~-~G~~~---~~---~~l~~l~~~~~-~~~~ 90 (561)
+.++||||||||+|||++|+.|++. |.+|+||||.+..++.. . +|++. .. ......+.+.. .+..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~------G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~ 78 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQS------GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDY 78 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTT
T ss_pred cccCCEEEECcCHHHHHHHHHHHHC------CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCC
Confidence 4579999999999999999999999 99999999998764332 1 23221 11 11111111000 0000
Q ss_pred c------cccc--chhhhhhhcCCCCcccCC----CCCCceeec----------CCcEE---eeHHHHHHHHHHHHHHCC
Q psy14496 91 F------NTPV--IEERFLFLSSKKSYKIPS----WILPICFKN----------HGNYI---ISLSDLVRWMGKKAENMG 145 (561)
Q Consensus 91 ~------~~~~--~~~~~~~~~~~~~~~~~~----~~~p~~~~~----------~~~~~---i~r~~l~~~L~~~a~~~g 145 (561)
+ .... ....+.|+...+ +.+.. ...+..... ...+. ..-..+.+.|.+.+.+.|
T Consensus 79 ~~d~~~v~~~~~~~~~~i~~l~~~G-v~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~g 157 (588)
T 2wdq_A 79 IGDQDAIEYMCKTGPEAILELEHMG-LPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNH 157 (588)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTT-CCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhHHHHHHHHHHcC-CCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 0 0000 112233332211 11100 000000000 00000 113578899999999999
Q ss_pred CEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 146 IDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 146 v~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
++|++++.|+++..++++++.+|.+.+. .+|+. .++.||.||+|+|..|..
T Consensus 158 v~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 158 TTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEV-------VYFKARATVLATGGAGRI 208 (588)
T ss_dssp CEEEETEEEEEEEECTTSCEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred CEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeE-------EEEEcCEEEECCCCCccc
Confidence 9999999999998754678888876321 12221 368999999999998864
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.22 E-value=4.9e-11 Score=119.20 Aligned_cols=120 Identities=23% Similarity=0.342 Sum_probs=85.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+.+||+||||||||+++|+.|++. |++|+|||+.+.+++... ..++... +
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~-----------~~~~~~~-------------~ 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR------GLSFRFVDPLPEPGGQLT-----------ALYPEKY-------------I 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSCHHHH-----------HTCTTSE-------------E
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCCeee-----------ccCCCce-------------e
Confidence 468999999999999999999999 999999999887754210 0000000 0
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
...+. ++ .+.+.++.+.|.+.+.+.+++++++++|+++..+++ .+.|.+.
T Consensus 54 --------~~~~~--~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~~--------- 103 (335)
T 2zbw_A 54 --------YDVAG--FP---------KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVTTS--------- 103 (335)
T ss_dssp --------CCSTT--CS---------SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEEET---------
T ss_pred --------eccCC--CC---------CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEEEC---------
Confidence 00010 01 255678888898888888999999999999976533 3445553
Q ss_pred eecccccCeEEecCEEEEccCCCchh
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||+|+|.+|..
T Consensus 104 ------~g~~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 104 ------QGNAYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp ------TSCEEEEEEEEECCTTSEEE
T ss_pred ------CCCEEEeCEEEECCCCCCCC
Confidence 24579999999999987643
No 74
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.22 E-value=1.2e-09 Score=116.80 Aligned_cols=69 Identities=22% Similarity=0.238 Sum_probs=53.9
Q ss_pred EEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 126 YIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 126 ~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++...+...|.+.+.+.|++++.+++|+++..+ ++++++|.+.+. .+|+ +.+++||.||.|+|.+|.
T Consensus 183 g~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 183 FRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGHH
T ss_pred CeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhHH
Confidence 34678889999999999999999999999999875 567778876421 0111 237999999999998864
No 75
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.21 E-value=3e-11 Score=126.19 Aligned_cols=157 Identities=11% Similarity=0.178 Sum_probs=90.8
Q ss_pred CcccEEEECchhHHHHHHHHHHh---ccccCCCCCc---EEEEcCCCCCCCceeecce--eChhhHHhhccccccCCccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQ---LAIKKNKEIK---ICVLEKGSELGAHILSGAI--IDPRSIFELFPKEKLNKLFN 92 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~---~~~~~~~G~~---V~ViEk~~~~g~~~~~G~~--~~~~~l~~l~~~~~~~~~~~ 92 (561)
|.+||+|||||||||++|..|++ . |++ |+|||+.+.+|+....... ..+ .+.+..
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~------G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~-----------~g~~~~ 63 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEK------GAEIPELVCFEKQADWGGQWNYTWRTGLDE-----------NGEPVH 63 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHT------TCCCCEEEEECSSSSSCGGGSCCSCCSBCT-----------TSSBCC
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhc------CCCCCcEEEEEcCCCCCCEeecCCCCCccc-----------cCCCCc
Confidence 45799999999999999999999 8 999 9999999888764321100 000 000000
Q ss_pred cccchhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCE--EEcCceEeEEEEcCCCCEEEEEe
Q psy14496 93 TPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGID--IFSGFSASEILYDSKNNVCGIAT 170 (561)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~--i~~g~~v~~i~~~~~g~v~~V~~ 170 (561)
.... ..+..........++.+.++..........+++..+.+.|.+.+++.|++ ++++++|+++..++++..+.|.+
T Consensus 64 ~~~y-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~ 142 (464)
T 2xve_A 64 SSMY-RYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTV 142 (464)
T ss_dssp CCCC-TTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEE
T ss_pred Cccc-cchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEE
Confidence 0000 00000000000001111111100000122367889999999999888988 99999999998764433456665
Q ss_pred cccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 171 NNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 171 ~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.+. .+|+ ..++.+|.||+|+|.+|.
T Consensus 143 ~~~---~~g~-------~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 143 QDH---TTDT-------IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EET---TTTE-------EEEEEESEEEECCCSSSS
T ss_pred EEc---CCCc-------eEEEEcCEEEECCCCCCC
Confidence 321 1121 147899999999997665
No 76
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.21 E-value=4.5e-10 Score=116.02 Aligned_cols=39 Identities=33% Similarity=0.486 Sum_probs=36.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
.||+|||||++||++|+.|++. |++|+|||+.+.+|+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~------G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN------GHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCCCcee
Confidence 3899999999999999999999 99999999999888764
No 77
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.21 E-value=1.4e-10 Score=123.71 Aligned_cols=141 Identities=25% Similarity=0.398 Sum_probs=90.6
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
...++||+|||||++|+++|+.|++. |++|+|||+.+.+|+....+ .++... ........
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GG~w~~~----------~~pg~~----~d~~~~~~ 72 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLREL------GRSVHVIETAGDVGGVWYWN----------RYPGAR----CDIESIEY 72 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHHC----------CCTTCB----CSSCTTTS
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccccc----------CCCcee----eccccccc
Confidence 34569999999999999999999999 99999999998887632110 011000 00000000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCC--CEEEcCceEeEEEEcCCCCEEEEEecccccc
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMG--IDIFSGFSASEILYDSKNNVCGIATNNFGIN 176 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~g--v~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~ 176 (561)
.+.+ .. . ....+.+ ......+.++.+.|.+.+.+.+ ++++++++|+++..++++..+.|.+.
T Consensus 73 ~~~f-~~--~-~~~~~~~-------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~----- 136 (542)
T 1w4x_A 73 CYSF-SE--E-VLQEWNW-------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTN----- 136 (542)
T ss_dssp SCCS-CH--H-HHHHCCC-------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEET-----
T ss_pred cccc-Ch--h-hhhccCc-------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEEC-----
Confidence 0000 00 0 0000001 1123567788888888887765 67999999999987655556667763
Q ss_pred cCCceecccccCeEEecCEEEEccCCCch
Q psy14496 177 KEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 177 ~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.+++||+||+|+|.+|.
T Consensus 137 ----------~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 137 ----------HGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp ----------TCCEEEEEEEEECCCSCCC
T ss_pred ----------CCCEEEeCEEEECcCCCCC
Confidence 2558999999999998765
No 78
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.21 E-value=3.7e-10 Score=116.76 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..+.+.|.+.+++.|++|+++++|++|..+ ++++.+|.+. |.+++||.||.|.|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 568888889998999999999999999875 5667777763 458999999999997655
No 79
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.19 E-value=8.4e-11 Score=124.95 Aligned_cols=140 Identities=17% Similarity=0.341 Sum_probs=93.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
++.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+..... .++ +...........
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~------g~~v~iiE~~~~~GGtw~~~----------~yP----g~~~d~~~~~y~ 66 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA------GMKVLGIEAGEDVGGTWYWN----------RYP----GCRLDTESYAYG 66 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHHC----------CCT----TCBCSSCHHHHC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccccC----------CCC----ceeecCchhhcc
Confidence 4569999999999999999999998 99999999998887642110 011 111111111111
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCC--EEEcCceEeEEEEcCCCCEEEEEeccccccc
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGI--DIFSGFSASEILYDSKNNVCGIATNNFGINK 177 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv--~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~ 177 (561)
+.+.... ...+. .......+.++.+.|.+.+++.|+ +++++++|+++..+++...+.|.+.
T Consensus 67 ~~f~~~~----~~~~~-------~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~------ 129 (545)
T 3uox_A 67 YFALKGI----IPEWE-------WSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLD------ 129 (545)
T ss_dssp HHHHTTS----STTCC-------CSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEET------
T ss_pred cccCccc----ccCCC-------ccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC------
Confidence 1111000 00001 112235677888999888888787 8999999999987655566777774
Q ss_pred CCceecccccCeEEecCEEEEccCCCch
Q psy14496 178 EGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 178 ~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++++|.||+|+|..|.
T Consensus 130 ---------~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 130 ---------NEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp ---------TTEEEEEEEEEECCCSCBC
T ss_pred ---------CCCEEEeCEEEECcCCCCC
Confidence 3568999999999997664
No 80
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.18 E-value=9.6e-11 Score=125.97 Aligned_cols=170 Identities=20% Similarity=0.229 Sum_probs=94.7
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCC--CcEEEEcCCCCCCCce--eeccee---Ch-hhHHhhcccc-ccCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE--IKICVLEKGSELGAHI--LSGAII---DP-RSIFELFPKE-KLNKL 90 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G--~~V~ViEk~~~~g~~~--~~G~~~---~~-~~l~~l~~~~-~~~~~ 90 (561)
+.++||||||||+|||++|+.|++. | .+|+||||.+..+++. .+|++. .. ......+.+. ..+..
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~------G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~ 76 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQA------NPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDW 76 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHH------CTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTT
T ss_pred cccCCEEEECCCHHHHHHHHHHHhc------CCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCC
Confidence 4568999999999999999999999 8 9999999987654432 123321 10 1111110000 00000
Q ss_pred c------ccc--cchhhhhhhcCCCCcccCC----CCCCceeecCC---cEE---eeHHHHHHHHHHHHHHCC-CEEEcC
Q psy14496 91 F------NTP--VIEERFLFLSSKKSYKIPS----WILPICFKNHG---NYI---ISLSDLVRWMGKKAENMG-IDIFSG 151 (561)
Q Consensus 91 ~------~~~--~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~---~~~---i~r~~l~~~L~~~a~~~g-v~i~~g 151 (561)
+ ... .....+.++...+ +.+.. .........+. .+. .....+.+.|.+.+.+.| ++++++
T Consensus 77 ~~d~~~v~~~~~~~~~~i~~L~~~G-v~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~ 155 (602)
T 1kf6_A 77 LCEQDVVDYFVHHCPTEMTQLELWG-CPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDE 155 (602)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTT-CCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcC-CCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeC
Confidence 0 000 0011122222110 00000 00000000000 000 113578899999998888 999999
Q ss_pred ceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchhh
Q psy14496 152 FSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLS 207 (561)
Q Consensus 152 ~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~~ 207 (561)
+.|+++..+ ++++.+|.+.+. .+|+. .++.||.||+|+|.+|.++
T Consensus 156 ~~v~~l~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 156 HFVLDILVD-DGHVRGLVAMNM---MEGTL-------VQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp EEEEEEEEE-TTEEEEEEEEET---TTTEE-------EEEECSCEEECCCCCGGGS
T ss_pred CEEEEEEEe-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCCcccc
Confidence 999999875 567778765210 12211 2689999999999999863
No 81
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.16 E-value=9.1e-11 Score=116.87 Aligned_cols=118 Identities=22% Similarity=0.415 Sum_probs=85.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+.+||+|||||||||++|+.|++. |++|+|||+.+.+|+... ..++...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gG~~~-----------~~~~~~~-------------- 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR------QASVKIIESLPQLGGQLS-----------ALYPEKY-------------- 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HHCTTSE--------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceeh-----------hcCCCce--------------
Confidence 458999999999999999999999 999999999988764320 0111000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
....+. ++ .+.+.++.+.|.+.+.+.|++++++++|+++..+++ ..+.|.+.+
T Consensus 55 -------~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~-------- 107 (332)
T 3lzw_A 55 -------IYDVAG--FP---------KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLVTNE-------- 107 (332)
T ss_dssp -------ECCSTT--CS---------SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SCEEEEESS--------
T ss_pred -------EeccCC--CC---------CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-CcEEEEECC--------
Confidence 000110 01 156778999999999888999999999999987533 234566532
Q ss_pred eecccccCeEEecCEEEEccCCCc
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
| ++.+|.||+|+|.++
T Consensus 108 -------g-~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 108 -------E-THYSKTVIITAGNGA 123 (332)
T ss_dssp -------E-EEEEEEEEECCTTSC
T ss_pred -------C-EEEeCEEEECCCCCc
Confidence 3 499999999999854
No 82
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.16 E-value=5.8e-11 Score=127.60 Aligned_cols=170 Identities=18% Similarity=0.184 Sum_probs=97.6
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce--eeccee---C---hhhHHhhccccc-cCC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI--LSGAII---D---PRSIFELFPKEK-LNK 89 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~--~~G~~~---~---~~~l~~l~~~~~-~~~ 89 (561)
.+.++||||||||+|||++|+.|++. |.+|+||||....+++. ..|++. . .......+.+.. .+.
T Consensus 15 ~~~~~DVvVVG~G~AGl~AAl~aa~~------G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~ 88 (621)
T 2h88_A 15 VDHEFDAVVVGAGGAGLRAAFGLSEA------GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSD 88 (621)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTT
T ss_pred ccccCCEEEECccHHHHHHHHHHHHC------CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcC
Confidence 35679999999999999999999999 99999999987765542 123221 1 111111111100 000
Q ss_pred cc------cc--ccchhhhhhhcCCCCcccCCC--------CCCceeec-------CCcEE---eeHHHHHHHHHHHHHH
Q psy14496 90 LF------NT--PVIEERFLFLSSKKSYKIPSW--------ILPICFKN-------HGNYI---ISLSDLVRWMGKKAEN 143 (561)
Q Consensus 90 ~~------~~--~~~~~~~~~~~~~~~~~~~~~--------~~p~~~~~-------~~~~~---i~r~~l~~~L~~~a~~ 143 (561)
.+ .. ......+.|+...+ +.+... .++..... ...+. .....+.+.|.+++.+
T Consensus 89 ~l~d~~~v~~l~~~s~~~i~~L~~~G-v~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~ 167 (621)
T 2h88_A 89 WLGDQDAIHYMTEQAPAAVIELENYG-MPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLR 167 (621)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHh
Confidence 00 00 00112223332211 111000 00000000 00000 1234788999999988
Q ss_pred CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 144 MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 144 ~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
.|++++.++.|+++..+ ++++.+|.+.+. .+|+. ..+.|+.||+|+|..+.+
T Consensus 168 ~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 168 YDTSYFVEYFALDLLME-NGECRGVIALCI---EDGTI-------HRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp SCCEEEETEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred CCCEEEEceEEEEEEEE-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCccccc
Confidence 99999999999999875 678888876321 12321 368999999999998864
No 83
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.15 E-value=1.6e-10 Score=113.82 Aligned_cols=35 Identities=26% Similarity=0.567 Sum_probs=32.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
.+|||+|||||||||+||+.|+++ |++|+|||+..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~------g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA------RKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCC
Confidence 469999999999999999999999 99999999864
No 84
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.14 E-value=1.4e-10 Score=125.58 Aligned_cols=65 Identities=20% Similarity=0.312 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
..+.+.|.+.+.+.|++|+.++.|+++..+ ++++.+|.+.+. .+|+. ..+.||.||+|+|..+.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDL---VTGDI-------IAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEEC---CCCcE-------EEEEcCEEEEccCcchhh
Confidence 478899999998899999999999999874 677888876320 12221 258999999999998864
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.14 E-value=2.1e-10 Score=119.38 Aligned_cols=158 Identities=13% Similarity=0.070 Sum_probs=89.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCCCCCceeecceeChhhHHhhcccccc---CCcccc--
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSELGAHILSGAIIDPRSIFELFPKEKL---NKLFNT-- 93 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~---~~~~~~-- 93 (561)
+.+||+|||||||||++|+.|++. |+ +|+|||+.+.+|+......... ..+ -++.... ..++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~------G~~~~V~v~E~~~~~GG~~~~~~~~~-~~~--~ip~~~~~~~~~~~~~g~ 75 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE------KAFDQVTLFERRGSPGGVWNYTSTLS-NKL--PVPSTNPILTTEPIVGPA 75 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCCSEEEEECSSSSSSTTCSCCSCCC-SCC--CSSBCCTTCCCCCBCCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCCCeEEEecCCCCCCeecCCCCCC-ccc--cccccccccccccccccc
Confidence 468999999999999999999999 99 9999999987765432211000 000 0000000 000000
Q ss_pred --c-cchhhhhhhcCCCC---cccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEE
Q psy14496 94 --P-VIEERFLFLSSKKS---YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCG 167 (561)
Q Consensus 94 --~-~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~ 167 (561)
. .....+..+..... ..+..+.++. .....+++..+.+.|.+.+.+.++.++++++|+++..++ + .+.
T Consensus 76 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~-~~~ 149 (447)
T 2gv8_A 76 ALPVYPSPLYRDLQTNTPIELMGYCDQSFKP----QTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-G-SWV 149 (447)
T ss_dssp SCCBCCCCCCTTCBCSSCHHHHSCTTCCCCT----TCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-T-EEE
T ss_pred ccCCccCchhhhhccCCCHHHhccCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-C-eEE
Confidence 0 00000000000000 0011111111 112336788999999998887788899999999997652 2 345
Q ss_pred EEecccccccCCceecccccCe---EEecCEEEEccCCCch
Q psy14496 168 IATNNFGINKEGIIKKNFQLGM---ELYAKYTLFAEGSRGH 205 (561)
Q Consensus 168 V~~~~~~~~~~g~~~~~f~~g~---~i~ad~vV~AdG~~s~ 205 (561)
|.+.+. . +|. ++.+|.||+|+|.+|.
T Consensus 150 V~~~~~---~---------~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 150 VTYKGT---K---------AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp EEEEES---S---------TTCCEEEEEESEEEECCCSSSS
T ss_pred EEEeec---C---------CCCeeEEEEeCEEEECCCCCCC
Confidence 555321 0 133 7899999999999764
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.13 E-value=3.7e-10 Score=111.89 Aligned_cols=115 Identities=22% Similarity=0.278 Sum_probs=82.8
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
..|.+||+|||||||||++|+.|++. |++|+|||+. +|+.......
T Consensus 12 ~~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~--~gg~~~~~~~-------------------------- 57 (323)
T 3f8d_A 12 PGEKFDVIIVGLGPAAYGAALYSARY------MLKTLVIGET--PGGQLTEAGI-------------------------- 57 (323)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS--TTGGGGGCCE--------------------------
T ss_pred CCCccCEEEECccHHHHHHHHHHHHC------CCcEEEEecc--CCCeeccccc--------------------------
Confidence 34679999999999999999999999 9999999998 5443211000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
...++. ++ .+....+.+.|.+.+.+.|++++. .+|+++..+++ . +.|.+.
T Consensus 58 ---------~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~-~-~~v~~~------- 107 (323)
T 3f8d_A 58 ---------VDDYLG--LI---------EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGD-E-FVVKTK------- 107 (323)
T ss_dssp ---------ECCSTT--ST---------TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC---C-EEEEES-------
T ss_pred ---------ccccCC--CC---------CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCC-E-EEEEEC-------
Confidence 000110 00 156678889999999889999999 89999876522 2 345553
Q ss_pred CceecccccCeEEecCEEEEccCCCch
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||+|+|....
T Consensus 108 --------~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 108 --------RKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp --------SSCEEEEEEEEECCCCEEC
T ss_pred --------CCCEEEcCEEEECcCCCCc
Confidence 2468999999999998754
No 87
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.11 E-value=2.4e-10 Score=113.99 Aligned_cols=116 Identities=23% Similarity=0.318 Sum_probs=80.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcC----CCCCCCceeecceeChhhHHhhccccccCCccccccc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEK----GSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVI 96 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk----~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~ 96 (561)
+.+||+||||||||+++|+.|++. |++|+|||+ ....++..... ..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~~~~~gg~~~~~------------~~------------ 56 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA------ELKPLLFEGWMANDIAPGGQLTTT------------TD------------ 56 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGC------------SE------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCceeeec------------cc------------
Confidence 458999999999999999999999 999999998 22222211000 00
Q ss_pred hhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccc
Q psy14496 97 EERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGIN 176 (561)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~ 176 (561)
. ...+. ++ ..+.+..+.+.|.+.+.+.|++++.++ |+++..+++ . +.|.+
T Consensus 57 ------~-----~~~~~--~~--------~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~-~~v~~------ 106 (333)
T 1vdc_A 57 ------V-----ENFPG--FP--------EGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSK-P-FKLFT------ 106 (333)
T ss_dssp ------E-----CCSTT--CT--------TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSS-S-EEEEC------
T ss_pred ------c-----ccCCC--Cc--------cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-E-EEEEE------
Confidence 0 00110 11 125677889999999988999999987 888875422 2 33444
Q ss_pred cCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 177 KEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 177 ~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++++|.||+|+|.++..
T Consensus 107 ----------~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 107 ----------DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp ----------SSEEEEEEEEEECCCEEECC
T ss_pred ----------CCcEEEcCEEEECCCCCcCC
Confidence 24589999999999987653
No 88
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.11 E-value=3e-10 Score=123.20 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=94.5
Q ss_pred CCcccEEEECchhHHHHHHHHHH---h-ccccCCCCCcEEEEcCCCCCCCceeecce------eCh-------hhHHhhc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLK---Q-LAIKKNKEIKICVLEKGSELGAHILSGAI------IDP-------RSIFELF 82 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La---~-~~~~~~~G~~V~ViEk~~~~g~~~~~G~~------~~~-------~~l~~l~ 82 (561)
+.++||||||||+|||++|+.|+ + . |.+|+||||....++...+++. +.+ ...+..+
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~------G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~ 93 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLG------GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYV 93 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTT------TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhC------CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHH
Confidence 46799999999999999999999 5 8 9999999999764332221111 100 1111111
Q ss_pred cccc-cCCccc------c--ccchhhhhhhcCCCCcccC----CCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CC-E
Q psy14496 83 PKEK-LNKLFN------T--PVIEERFLFLSSKKSYKIP----SWILPICFKNHGNYIISLSDLVRWMGKKAENM-GI-D 147 (561)
Q Consensus 83 ~~~~-~~~~~~------~--~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv-~ 147 (561)
.... .+..+. . ......+.++...+ +.+. ....+. ......+....+.+.|.+.+.+. || +
T Consensus 94 ~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~~G-v~f~~~~~g~~~~~---~~~~~~~~g~~~~~~l~~~~~~~~gv~~ 169 (643)
T 1jnr_A 94 RYVTLDMMGLAREDLVADYARHVDGTVHLFEKWG-LPIWKTPDGKYVRE---GQWQIMIHGESYKPIIAEAAKMAVGEEN 169 (643)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCBCBCTTSCBCBS---SSSCEEEEETTHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHcC-CcceeCCCCCccCC---CccccCCCcHHHHHHHHHHHHhcCCCcE
Confidence 1100 000000 0 00112233333211 1110 000010 00011233445778888888877 99 9
Q ss_pred EEcCceEeEEEEcCC--CCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 148 IFSGFSASEILYDSK--NNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 148 i~~g~~v~~i~~~~~--g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
++.++.|+++..+++ +++.||.+.+. .+|+ ...+.|+.||+|+|..|.+
T Consensus 170 i~~~~~v~~L~~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 170 IYERVFIFELLKDNNDPNAVAGAVGFSV---REPK-------FYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EECSEEEEEEEECTTCTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBCSS
T ss_pred EEecCEEEEEEEcCCccceeEEEEEEEe---cCCc-------EEEEEcCEEEECCCccccc
Confidence 999999999987633 28888875220 1222 1368999999999998863
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.10 E-value=2.1e-10 Score=114.48 Aligned_cols=122 Identities=20% Similarity=0.293 Sum_probs=83.3
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC----CCCCceeecceeChhhHHhhccccccCCcccc
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS----ELGAHILSGAIIDPRSIFELFPKEKLNKLFNT 93 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~----~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~ 93 (561)
...+.+||+|||||||||++|+.|++. |++|+|||+.+ .+|+..... .
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~vie~~~~~~~~~gg~~~~~------------------~---- 69 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARA------EIKPILYEGMMANGIAAGGQLTTT------------------T---- 69 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGS------------------S----
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCcCcccccc------------------h----
Confidence 445789999999999999999999999 99999999965 333211000 0
Q ss_pred ccchhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccc
Q psy14496 94 PVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNF 173 (561)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~ 173 (561)
....++. ++ ..+.+..+.+.|.+.+.+.|++++.++ |+++..+ ++. +.+.+...
T Consensus 70 -------------~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~-~~v~~~~~ 123 (338)
T 3itj_A 70 -------------EIENFPG--FP--------DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLS-SKP-FKLWTEFN 123 (338)
T ss_dssp -------------EECCSTT--CT--------TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECS-SSS-EEEEETTC
T ss_pred -------------hhcccCC--Cc--------ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCE-EEEEEEec
Confidence 0000010 11 125677899999999999999999998 8888764 333 34544210
Q ss_pred ccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 174 GINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 174 ~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.++.++.+|.||+|+|.++.
T Consensus 124 ------------~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 124 ------------EDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp ------------SSSCCEEEEEEEECCCEEEC
T ss_pred ------------CCCcEEEeCEEEECcCCCcC
Confidence 12457999999999998654
No 90
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.10 E-value=3.8e-10 Score=111.87 Aligned_cols=115 Identities=23% Similarity=0.306 Sum_probs=79.5
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
+++.+||+||||||||+++|+.|++. |++|+|||+. .+|+..... ...
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~------------~~~------------- 60 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS------GFSVAILDKA-VAGGLTAEA------------PLV------------- 60 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTGGGGGC------------SCB-------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeCC-CCCcccccc------------chh-------------
Confidence 34579999999999999999999999 9999999994 444321100 000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
...+.+ ..+.+..+.+.|.+.+.+.|++++. .+|+++..+++ .+.|.+.
T Consensus 61 ----------~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~~~v~~~------- 109 (319)
T 3cty_A 61 ----------ENYLGF-----------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQG--GFDIETN------- 109 (319)
T ss_dssp ----------CCBTTB-----------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETT--EEEEEES-------
T ss_pred ----------hhcCCC-----------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC--EEEEEEC-------
Confidence 000100 0244567888888888888999988 68888876422 2334441
Q ss_pred CceecccccCeEEecCEEEEccCCCch
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||+|+|.++.
T Consensus 110 ---------~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 110 ---------DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp ---------SSEEEEEEEEECCCEEEC
T ss_pred ---------CCEEEeCEEEECCCCCcc
Confidence 347999999999997655
No 91
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.09 E-value=3.5e-10 Score=110.69 Aligned_cols=112 Identities=19% Similarity=0.229 Sum_probs=78.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
|.+||+|||||||||++|+.|++. |++|+|||+.+..+.. ..+.
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~~~~----------------~~~~-------------- 44 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRA------RKNILLVDAGERRNRF----------------ASHS-------------- 44 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCCGGGG----------------CSCC--------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCccccc----------------chhh--------------
Confidence 468999999999999999999999 9999999987532110 0000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
..++ . ...+...++.+.+.+.+.+. +++++.+ +|+++..++++ +.|.+.
T Consensus 45 --------~~~~-----~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~--~~v~~~-------- 94 (297)
T 3fbs_A 45 --------HGFL-----G------QDGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGE--FIVEID-------- 94 (297)
T ss_dssp --------CSST-----T------CTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTE--EEEEET--------
T ss_pred --------cCCc-----C------CCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCe--EEEEEC--------
Confidence 0000 0 01244567888888888776 7887654 88888765332 445553
Q ss_pred ceecccccCeEEecCEEEEccCCCch
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||+|+|..+.
T Consensus 95 -------~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 95 -------GGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp -------TSCEEEEEEEEECCCCEEE
T ss_pred -------CCCEEEcCEEEECCCCCCC
Confidence 3568999999999998765
No 92
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.1e-10 Score=116.22 Aligned_cols=47 Identities=38% Similarity=0.603 Sum_probs=39.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGA 71 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~ 71 (561)
.++||+|||||||||+||+.|+++ ..|++|+||||.+.+|+....++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~ 110 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGG 110 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCC
Confidence 358999999999999999999753 22999999999999988765543
No 93
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.07 E-value=5.2e-10 Score=111.18 Aligned_cols=117 Identities=28% Similarity=0.401 Sum_probs=80.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+.+||+||||||||+++|+.|++. |++|+|||+. .+|+..... ...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~------------~~~--------------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA------QLSTLILEKG-MPGGQIAWS------------EEV--------------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGC------------SCB---------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc------CCcEEEEeCC-CCCcccccc------------ccc---------------
Confidence 468999999999999999999999 9999999998 454422100 000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcC-CCCEEEEEecccccccCC
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDS-KNNVCGIATNNFGINKEG 179 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~-~g~v~~V~~~~~~~~~~g 179 (561)
...+. ++ ..+.+..+.+.|.+.+++.|++++. .+|+++..++ ++..+.|.+.
T Consensus 53 --------~~~~~--~~--------~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~-------- 105 (325)
T 2q7v_A 53 --------ENFPG--FP--------EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRG-------- 105 (325)
T ss_dssp --------CCSTT--CS--------SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEE--------
T ss_pred --------ccCCC--CC--------CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEEC--------
Confidence 00010 01 0245678888899999889999987 5788887641 1111234332
Q ss_pred ceecccccCeEEecCEEEEccCCCch
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++++|.||+|+|.++.
T Consensus 106 -------~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 106 -------YNGEYRAKAVILATGADPR 124 (325)
T ss_dssp -------SSCEEEEEEEEECCCEEEC
T ss_pred -------CCCEEEeCEEEECcCCCcC
Confidence 3458999999999998654
No 94
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.07 E-value=1e-09 Score=110.98 Aligned_cols=141 Identities=24% Similarity=0.325 Sum_probs=83.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
+++||+||||||||+++|+.|++. |+ +|+|||+.+ +|+....- +.. ..++ ........
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~------g~~~v~lie~~~-~Gg~~~~~----~~~-~~~~---------~~~~~~~~ 61 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDF------GITDVIILEKGT-VGHSFKHW----PKS-TRTI---------TPSFTSNG 61 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSS-TTHHHHTS----CTT-CBCS---------SCCCCCGG
T ss_pred ccCcEEEECcCHHHHHHHHHHHHc------CCCcEEEEecCC-CCCccccC----ccc-cccc---------Ccchhccc
Confidence 358999999999999999999999 99 999999987 55421100 000 0000 00000000
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
+.+... ............ .....+.+..+.+.|.+.+++.|++++++++|+++..++++ +.|.+.+
T Consensus 62 ~g~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~------- 127 (369)
T 3d1c_A 62 FGMPDM----NAISMDTSPAFT-FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTT------- 127 (369)
T ss_dssp GTCCCT----TCSSTTCCHHHH-HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESS-------
T ss_pred CCchhh----hhcccccccccc-ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCC-------
Confidence 000000 000000000000 00112566778888888888899999999999999865332 3455532
Q ss_pred ceecccccCeEEecCEEEEccCCCch
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+ ++.+|.||+|+|.++.
T Consensus 128 --------g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 128 --------E-TYHADYIFVATGDYNF 144 (369)
T ss_dssp --------C-CEEEEEEEECCCSTTS
T ss_pred --------C-EEEeCEEEECCCCCCc
Confidence 2 5899999999998753
No 95
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.07 E-value=1.1e-09 Score=108.15 Aligned_cols=114 Identities=22% Similarity=0.304 Sum_probs=80.6
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
+||+||||||||+++|+.|++. |+ +|+|||+. .+|+..... ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~~v~lie~~-~~gg~~~~~------------~~~---------------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG------GVKNAVLFEKG-MPGGQITGS------------SEI---------------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCSSEEEECSS-STTCGGGGC------------SCB----------------
T ss_pred ceEEEECccHHHHHHHHHHHHC------CCCcEEEEcCC-CCCcccccc------------ccc----------------
Confidence 7999999999999999999999 99 99999995 344321100 000
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
...+. + ...+.+..+.+.|.+.+.+.|++++. .+|+++..++ + .+.|.+.
T Consensus 47 -------~~~~~--~--------~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~-~-~~~v~~~---------- 96 (311)
T 2q0l_A 47 -------ENYPG--V--------KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD-S-HFVILAE---------- 96 (311)
T ss_dssp -------CCSTT--C--------CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET-T-EEEEEET----------
T ss_pred -------ccCCC--C--------cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC-C-EEEEEEc----------
Confidence 00010 0 11356778889998888888999988 7888887642 2 2334442
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++++|.||+|+|.++..
T Consensus 97 -----~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 97 -----DGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp -----TSCEEEEEEEEECCCEEECC
T ss_pred -----CCCEEECCEEEECCCCCCCC
Confidence 34589999999999987653
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.06 E-value=9.3e-10 Score=115.04 Aligned_cols=156 Identities=19% Similarity=0.207 Sum_probs=88.5
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc-ee-ecce---eCh-hhHHhhccccc-cCCcc-----
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH-IL-SGAI---IDP-RSIFELFPKEK-LNKLF----- 91 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~-~~-~G~~---~~~-~~l~~l~~~~~-~~~~~----- 91 (561)
||+|||||+|||++|+.|++. |++|+||||. ..++. .. .|++ +++ ......+.+.. .+..+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~------G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~ 73 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA------GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKT 73 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC------CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHH
Confidence 899999999999999999999 9999999999 44443 11 1221 111 00111111000 00000
Q ss_pred -ccc--cchhhhhhhcCCCCcccC-------CCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcC
Q psy14496 92 -NTP--VIEERFLFLSSKKSYKIP-------SWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDS 161 (561)
Q Consensus 92 -~~~--~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~ 161 (561)
... .....+.++...+ +.+. ....+..... .......+.+.|.+.+++.|++++.++.| ++..+
T Consensus 74 v~~~~~~~~~~i~~l~~~G-v~~~~~~~~~~g~~~~r~~~~---~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~- 147 (472)
T 2e5v_A 74 VNYVTSEAKNVIETFESWG-FEFEEDLRLEGGHTKRRVLHR---TDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVK- 147 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCCCSSCBCCTTCSSCCEECS---SSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-
T ss_pred HHHHHHHHHHHHHHHHHcC-CCCCcccccccCcCcCcEEEe---CCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-
Confidence 000 0011122222110 0010 0001110000 01234678889999997789999999999 99765
Q ss_pred CCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 162 KNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 162 ~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
++++.+|.+.+ . +.++.+|.||+|+|..|.+
T Consensus 148 ~~~v~Gv~v~~-------------~-~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 148 DGKVTGFVTEK-------------R-GLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp TTEEEEEEETT-------------T-EEECCCSEEEECCCCCGGG
T ss_pred CCEEEEEEEEe-------------C-CCeEEeeeEEECCCCCccc
Confidence 56777776632 1 1257799999999999875
No 97
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.06 E-value=4.9e-10 Score=119.04 Aligned_cols=169 Identities=22% Similarity=0.256 Sum_probs=87.1
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce-ee-ccee---C-hhhHHhhccccc-cCCcc-
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI-LS-GAII---D-PRSIFELFPKEK-LNKLF- 91 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~-~~-G~~~---~-~~~l~~l~~~~~-~~~~~- 91 (561)
+.++||+|||||+|||++|+.|++ |.+|+||||.+..++.. .+ |++. . ....+..+.++. .+..+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-------G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~ 78 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-------QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGIC 78 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-------CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccC
Confidence 356999999999999999999864 78999999998765432 22 2221 1 111111111110 00000
Q ss_pred -----ccc--cchhhhhhhcCCCCcccCCCCCC--ce---eecCCcE----E-----eeHHHHHHHHHHHHHH-CCCEEE
Q psy14496 92 -----NTP--VIEERFLFLSSKKSYKIPSWILP--IC---FKNHGNY----I-----ISLSDLVRWMGKKAEN-MGIDIF 149 (561)
Q Consensus 92 -----~~~--~~~~~~~~~~~~~~~~~~~~~~p--~~---~~~~~~~----~-----i~r~~l~~~L~~~a~~-~gv~i~ 149 (561)
... .....+.|+...+ +.+.....+ .. ....++. . .....+.+.|.+.+.+ .|++++
T Consensus 79 d~~~v~~~~~~~~~~i~~l~~~G-v~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~ 157 (540)
T 1chu_A 79 DRHAVEFVASNARSCVQWLIDQG-VLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVL 157 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-CC--------------------------------------CCCHHHHHHCTTEEEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcC-CCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEE
Confidence 000 0112223332211 111000000 00 0000000 0 1234677888888888 799999
Q ss_pred cCceEeEEEEcCCC------CEEEEEecccccccCCceecccccCeEEecCEEEEccCCCchh
Q psy14496 150 SGFSASEILYDSKN------NVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 150 ~g~~v~~i~~~~~g------~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+++.|+++..++++ ++.+|.+.+. .+|+. .++.||.||+|+|..|.+
T Consensus 158 ~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 158 ERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKETV-------ETCHAKAVVLATGGASKV 210 (540)
T ss_dssp CSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTEE-------EEEECSEEEECCCCCGGG
T ss_pred eCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCcccc
Confidence 99999999874345 7888877421 12221 378999999999999875
No 98
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.05 E-value=7e-10 Score=110.79 Aligned_cols=116 Identities=21% Similarity=0.277 Sum_probs=80.0
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
.++.+||+||||||||+++|+.|++. |++|+|||+. .+|+..... ..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~------------~~-------------- 57 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA------QLAPLVFEGT-SFGGALMTT------------TD-------------- 57 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT------TCCCEEECCS-SCSCGGGSC------------SC--------------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCceecc------------ch--------------
Confidence 34579999999999999999999999 9999999975 333321000 00
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEE-Eeccccccc
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGI-ATNNFGINK 177 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V-~~~~~~~~~ 177 (561)
....+. ++ ..+.+..+.+.|.+.+.+.|++++.++ |+++.. ++. +.| .+.
T Consensus 58 ---------~~~~~~--~~--------~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~--~~v~~~~------ 108 (335)
T 2a87_A 58 ---------VENYPG--FR--------NGITGPELMDEMREQALRFGADLRMED-VESVSL-HGP--LKSVVTA------ 108 (335)
T ss_dssp ---------BCCSTT--CT--------TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS--SEEEEET------
T ss_pred ---------hhhcCC--CC--------CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc--EEEEEeC------
Confidence 000010 00 124566788888888888999999987 888765 222 233 332
Q ss_pred CCceecccccCeEEecCEEEEccCCCch
Q psy14496 178 EGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 178 ~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++++|.||+|+|.++.
T Consensus 109 ---------~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 109 ---------DGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp ---------TSCEEEEEEEEECCCEEEC
T ss_pred ---------CCCEEEeCEEEECCCCCcc
Confidence 2458999999999998765
No 99
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.03 E-value=1e-09 Score=108.46 Aligned_cols=113 Identities=26% Similarity=0.339 Sum_probs=72.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
|+|||+||||||||+++|+.|+++ |++|+||||.. +|+....-.. ++
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~------g~~V~liE~~~-~gG~~~~~~~---------i~----------------- 51 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA------NLKTVMIERGI-PGGQMANTEE---------VE----------------- 51 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTGGGGGCSC---------BC-----------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEecCC-CCCeeecccc---------cC-----------------
Confidence 679999999999999999999999 99999999864 4432110000 00
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
.++.+ -.+...++.....+...+.+..+..+..+...... .. ..+.
T Consensus 52 ---------~~p~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~----------- 97 (312)
T 4gcm_A 52 ---------NFPGF-----------EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EY--KVIN----------- 97 (312)
T ss_dssp ---------CSTTC-----------SSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SC--EEEE-----------
T ss_pred ---------CcCCc-----------cccchHHHHHHHHHHHhhccccccceeeeeeeeee-cc--eeec-----------
Confidence 01100 01333456666666677777777777666554322 21 1122
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.++.++++|.||+|+|.+..
T Consensus 98 -----~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 98 -----FGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp -----CSSCEEEEEEEEECCCEEEC
T ss_pred -----cCCeEEEeceeEEcccCccC
Confidence 23568999999999996543
No 100
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.03 E-value=1.1e-09 Score=107.89 Aligned_cols=115 Identities=25% Similarity=0.358 Sum_probs=80.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
++||+||||||||+++|+.|++. |++|+|||+. .|+.... ...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~li~~~--~gG~~~~--------------~~~--------------- 43 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK------GIRTGLMGER--FGGQILD--------------TVD--------------- 43 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSS--TTGGGGG--------------CCE---------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCC--CCceecc--------------ccc---------------
Confidence 47999999999999999999999 9999999863 3332110 000
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCC-CCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSK-NNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~-g~v~~V~~~~~~~~~~g~ 180 (561)
++. ++ ......+..+.+.|.+.+.+.|++++.+++|+.+..+.+ +..+.|.+.
T Consensus 44 ---------~~~--~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~--------- 97 (310)
T 1fl2_A 44 ---------IEN--YI------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETA--------- 97 (310)
T ss_dssp ---------ECC--BT------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEET---------
T ss_pred ---------ccc--cc------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEEC---------
Confidence 000 00 000145667888888888888999999999999865322 223445553
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++++|.||+|+|.++.
T Consensus 98 ------~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 98 ------SGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp ------TSCEEEEEEEEECCCEEEC
T ss_pred ------CCCEEEeCEEEECcCCCcC
Confidence 3558999999999998654
No 101
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.03 E-value=6.2e-10 Score=111.56 Aligned_cols=39 Identities=28% Similarity=0.472 Sum_probs=35.7
Q ss_pred ccEEEECchhHHHHHHHHHHh---ccccCCCCCcEEEEcCCCCCCCce
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQ---LAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~---~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+||+|||||++||++|+.|++ . |++|+||||.+.+|+..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~------G~~V~v~Ek~~~~gg~~ 43 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG------PLYLAVWDKADDSGGRM 43 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C------CEEEEEECSSSSSCGGG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC------CceEEEEECCCCCccce
Confidence 599999999999999999999 8 99999999998877643
No 102
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.03 E-value=3.3e-10 Score=122.56 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=52.7
Q ss_pred eeHHHHHHHHHHHHHHC--CCEEEcCceEeEEEEcCC--CCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 128 ISLSDLVRWMGKKAENM--GIDIFSGFSASEILYDSK--NNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 128 i~r~~l~~~L~~~a~~~--gv~i~~g~~v~~i~~~~~--g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
+....+.+.|.+++.+. ||+++.++.|+++..+++ +++.||...+. .+|+ ...+.|+.||+|+|..
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANE-------VHIFKANAMVVACGGA 232 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCB
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCc-------EEEEEeCEEEECCCcc
Confidence 44557888899988887 999999999999988644 48999876321 2232 1468999999999998
Q ss_pred chh
Q psy14496 204 GHL 206 (561)
Q Consensus 204 s~~ 206 (561)
+.+
T Consensus 233 g~~ 235 (662)
T 3gyx_A 233 VNV 235 (662)
T ss_dssp CSS
T ss_pred ccc
Confidence 863
No 103
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.00 E-value=1.3e-09 Score=108.03 Aligned_cols=114 Identities=16% Similarity=0.243 Sum_probs=78.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+.+||+||||||||+++|+.|++. |++|+|||+. .+|+..... ...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~------------~~~--------------- 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA------NLQPVLITGM-EKGGQLTTT------------TEV--------------- 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCCEEECCS-STTGGGGGC------------SBC---------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCcEEEEccC-CCCceEecc------------hhh---------------
Confidence 468999999999999999999999 9999999965 344321000 000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
...+. ++ ..+.+..+.+.+.+.+.+.|++++.++ ++++..+ ++. +.| +.
T Consensus 50 --------~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~-~~v-~~--------- 98 (320)
T 1trb_A 50 --------ENWPG--DP--------NDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQ-NRP-FRL-NG--------- 98 (320)
T ss_dssp --------CCSTT--CC--------SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECS-SSS-EEE-EE---------
T ss_pred --------hhCCC--CC--------CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEec-CCE-EEE-Ee---------
Confidence 00010 01 114566788888888888999999986 8888654 222 333 31
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
++.++.+|.||+|+|.++.
T Consensus 99 ------~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 99 ------DNGEYTCDALIIATGASAR 117 (320)
T ss_dssp ------SSCEEEEEEEEECCCEEEC
T ss_pred ------CCCEEEcCEEEECCCCCcC
Confidence 2458999999999998765
No 104
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.99 E-value=9.9e-10 Score=108.49 Aligned_cols=118 Identities=24% Similarity=0.376 Sum_probs=75.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.|||+|||||||||+||+.|+++ |++|+|||+....+. ...|.+ .+.. +
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~------g~~v~liE~~~~gg~-~~~G~~-~~~~---~-------------------- 52 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS------SLKPVMYEGFMAGGV-AAGGQL-TTTT---I-------------------- 52 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSGGGC-CTTCGG-GGSS---E--------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCc-ccCCCc-CChH---H--------------------
Confidence 49999999999999999999999 999999998754221 111111 0000 0
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
+. .++. +|. .+...++...+.+.+.+.++++.... +.....+.+. ..+.+
T Consensus 53 -i~-----~~~g--~~~--------~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~--~~~~~----------- 102 (314)
T 4a5l_A 53 -IE-----NFPG--FPN--------GIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQP--FKLFT----------- 102 (314)
T ss_dssp -EC-----CSTT--CTT--------CEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS--EEEEE-----------
T ss_pred -hh-----hccC--Ccc--------cCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc--eEEEE-----------
Confidence 00 0010 111 24566788888888888899887654 4444333222 22333
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.++.++.+|.||+|+|...
T Consensus 103 ----~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 103 ----EEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp ----TTCCEEEEEEEEECCCEEE
T ss_pred ----CCCeEEEEeEEEEcccccc
Confidence 2356899999999999754
No 105
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.98 E-value=1.8e-08 Score=104.12 Aligned_cols=39 Identities=49% Similarity=0.735 Sum_probs=36.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+||+|||||++||++|+.|+++ |++|+|||+++.+|+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~------G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA------GKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHc------CCeEEEEecCCCccCee
Confidence 7999999999999999999999 99999999988887654
No 106
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.98 E-value=3.6e-09 Score=111.11 Aligned_cols=41 Identities=34% Similarity=0.566 Sum_probs=37.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~------g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR------GTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT------TCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCcee
Confidence 468999999999999999999999 99999999999998764
No 107
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.97 E-value=2.5e-08 Score=104.55 Aligned_cols=41 Identities=37% Similarity=0.614 Sum_probs=37.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC--CcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE--IKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G--~~V~ViEk~~~~g~~~ 67 (561)
+.+||+|||||++||++|+.|++. | ++|+|||+.+.+|++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~------g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERA------FPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHH------CTTSEEEEECSSSSSBTTC
T ss_pred CcccEEEECCCHHHHHHHHHHHHh------CCCCCEEEEECCCCCCcee
Confidence 458999999999999999999999 8 9999999998887753
No 108
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.96 E-value=5.7e-10 Score=116.73 Aligned_cols=152 Identities=16% Similarity=0.209 Sum_probs=86.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCC-----CcEEEEcCCCCCCCceeecceeChhhHH-hhccccccCCcccccc
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-----IKICVLEKGSELGAHILSGAIIDPRSIF-ELFPKEKLNKLFNTPV 95 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-----~~V~ViEk~~~~g~~~~~G~~~~~~~l~-~l~~~~~~~~~~~~~~ 95 (561)
.+||+|||||||||++|+.|++. | ++|+|||+.+..+.+ .+..+....+. ..+.++. .+..+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~------g~~~~~~~v~liE~~~~~g~~--~~~~~~~~~~~~~~~~~l~---~~~~p~ 98 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER------AQAQGALEVLFLDKQGDYRWH--GNTLVSQSELQISFLKDLV---SLRNPT 98 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH------HHHHCCCCEEEEESCSSCCSS--GGGCCSSCBCSSCTTSSSS---TTTCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhc------ccccCcccEEEEecCCCCCCc--CCCCCCCCcCCcchhhccc---cccCCC
Confidence 57999999999999999999999 8 999999999987642 11111000000 0000000 000000
Q ss_pred chhhh-hhhcCCCC-cccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcC-CCCEE--EEEe
Q psy14496 96 IEERF-LFLSSKKS-YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDS-KNNVC--GIAT 170 (561)
Q Consensus 96 ~~~~~-~~~~~~~~-~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~-~g~v~--~V~~ 170 (561)
....+ .|+..... ..+. ....+...+..+.+.|...+++.+++++++++|+++..++ ++..+ .|.+
T Consensus 99 ~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~ 169 (463)
T 3s5w_A 99 SPYSFVNYLHKHDRLVDFI---------NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVIS 169 (463)
T ss_dssp CTTSHHHHHHHTTCHHHHH---------HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCChhHhhhhcCceeecc---------cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEE
Confidence 00000 01111100 0000 0112335678888889888888889999999999997642 23333 3444
Q ss_pred cccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 171 NNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 171 ~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.+. +|+ ..++.+|.||+|+|...
T Consensus 170 ~~g----~g~-------~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 170 RNA----DGE-------ELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EET----TSC-------EEEEEESEEEECCCCEE
T ss_pred ecC----CCc-------eEEEEeCEEEECCCCCC
Confidence 321 111 02789999999999643
No 109
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.94 E-value=4.5e-09 Score=111.35 Aligned_cols=117 Identities=24% Similarity=0.357 Sum_probs=81.8
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
+..+||+||||||||+++|+.|++. |++|+|+|+. .|+... . .. +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~------G~~v~lie~~--~GG~~~-----~---------~~--~----------- 254 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK------GIRTGLMGER--FGGQVL-----D---------TV--D----------- 254 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS--TTGGGT-----T---------CS--C-----------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC------CCeEEEEECC--CCCccc-----c---------cc--c-----------
Confidence 4579999999999999999999999 9999999863 333210 0 00 0
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCC-CCEEEEEecccccccC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSK-NNVCGIATNNFGINKE 178 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~-g~v~~V~~~~~~~~~~ 178 (561)
++. ++ ......+..+.+.|.+.+.+.|++++.+++|+++..+.+ +..+.|.+.
T Consensus 255 -----------~~~--~~------~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~------- 308 (521)
T 1hyu_A 255 -----------IEN--YI------SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETA------- 308 (521)
T ss_dssp -----------BCC--BT------TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEET-------
T ss_pred -----------ccc--cC------CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEEC-------
Confidence 000 00 000134567888888888889999999999999964321 223455553
Q ss_pred CceecccccCeEEecCEEEEccCCCch
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++++|.||+|+|.++.
T Consensus 309 --------~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 309 --------SGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp --------TSCEEEEEEEEECCCEEEC
T ss_pred --------CCCEEEcCEEEECCCCCcC
Confidence 3568999999999997654
No 110
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.88 E-value=7.2e-09 Score=108.75 Aligned_cols=41 Identities=34% Similarity=0.631 Sum_probs=37.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~~g~~~ 67 (561)
|.+||+|||||++||++|+.|++. |+ +|+|||+++.+|+..
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~------G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRA------PCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTS------SSCCEEEEECSSSSSBTTC
T ss_pred CCceEEEECCcHHHHHHHHHHHhC------CCCCcEEEEeCCCCCCCce
Confidence 357999999999999999999999 99 999999999888765
No 111
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.87 E-value=2.5e-09 Score=112.67 Aligned_cols=43 Identities=40% Similarity=0.757 Sum_probs=35.9
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
+.+|++||+||||||||+++|+.|++. |++|+||||.+.+|+.
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQL------GMKVAVVEKRSTYGGT 63 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHH
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCc
Confidence 445789999999999999999999999 9999999998887764
No 112
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.87 E-value=1.4e-08 Score=99.98 Aligned_cols=115 Identities=23% Similarity=0.286 Sum_probs=78.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEE-EcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICV-LEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~V-iEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
..+||+|||||||||++|+.|++. |++|+| +|| ..+|+..... +.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~li~e~-~~~gG~~~~~--------------~~------------- 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG------GLKNVVMFEK-GMPGGQITSS--------------SE------------- 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH------TCSCEEEECS-SSTTGGGGGC--------------SC-------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCCeEEEEeC-CCCCceeeee--------------ce-------------
Confidence 358999999999999999999999 999999 999 5555432100 00
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
....+. + ...+.+.++...+.+.+.+.|++++.+ +|+++ .+++...+.|.+..
T Consensus 49 --------~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~------- 101 (315)
T 3r9u_A 49 --------IENYPG--V--------AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG------- 101 (315)
T ss_dssp --------BCCSTT--C--------CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT-------
T ss_pred --------eccCCC--C--------CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec-------
Confidence 000010 0 112456788888999888899999988 88888 54311223332211
Q ss_pred ceecccccCeEEecCEEEEccCCCc
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
++ ++.+|.||.|+|...
T Consensus 102 -------~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 102 -------GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp -------SC-EEEEEEEEECCCEEE
T ss_pred -------CC-EEEeCEEEEeeCCCC
Confidence 23 799999999999743
No 113
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=98.84 E-value=5.3e-10 Score=86.14 Aligned_cols=68 Identities=21% Similarity=0.325 Sum_probs=51.6
Q ss_pred ceEEcCCCCcccccccccccccccccCCeeEEEEeecCc-eeE--EEEccCCCccCCcccccCCCCCeeEECCCCCCC
Q psy14496 481 HLILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNK-IQH--LQINAQNCIHCKTCDIKDPTQNIEWITPEGGSG 555 (561)
Q Consensus 481 h~~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~-~~~--~~~~~~~C~~Cg~C~~~cp~~~i~~~~p~g~~g 555 (561)
|+.+ +.+.|+. ++.|+.+||.+++++.+..+. ... ..++.+.|++||.|..+||++||+|+...++.-
T Consensus 2 ~~~~-~~~~C~~------Cg~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~ 72 (80)
T 1jb0_C 2 HTVK-IYDTCIG------CTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAET 72 (80)
T ss_dssp CEEE-EETTCCC------CCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEECCSCC
T ss_pred CCcc-cCCcCcC------hhHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeeecchHH
Confidence 5544 5678987 578999999999988652211 112 235778999999999999999999988887653
No 114
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.84 E-value=3.8e-09 Score=110.94 Aligned_cols=40 Identities=43% Similarity=0.715 Sum_probs=36.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.++||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~ 43 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL------GFNTACVEKRGKLGGT 43 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCcCCc
Confidence 358999999999999999999999 9999999998777654
No 115
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.82 E-value=3.4e-09 Score=111.34 Aligned_cols=40 Identities=40% Similarity=0.751 Sum_probs=36.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
+++||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~ 44 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADE------GLKVAIVERYKTLGGV 44 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSCSSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCc
Confidence 469999999999999999999999 9999999998777654
No 116
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.80 E-value=1.8e-08 Score=106.09 Aligned_cols=159 Identities=20% Similarity=0.273 Sum_probs=88.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhcccc--------CCCCCcEEEEcCCCCCCCceeecceeChhhHHh-hccccccCCcc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIK--------KNKEIKICVLEKGSELGAHILSGAIIDPRSIFE-LFPKEKLNKLF 91 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~--------~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~-l~~~~~~~~~~ 91 (561)
..+||||||+||+||++|+.|++.... ...+..++.+|+.+..+.+ .|-.+....++- ++.++. .+
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh--~g~~~p~~~~q~~fl~Dlv---tl 112 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWH--SGMLVPGSKMQISFIKDLA---TL 112 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSS--GGGCCTTCBCSSCGGGSSS---TT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcC--CCCCCCCccccccchhhhc---cc
Confidence 348999999999999999999876110 1123567778887766533 121111000000 001100 00
Q ss_pred ccccchhhh-hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCC------C
Q psy14496 92 NTPVIEERF-LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKN------N 164 (561)
Q Consensus 92 ~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g------~ 164 (561)
..+.....+ .++...+.+ .+ ..+...+...|.++.++|...|++.+..|+++++|+++...+++ .
T Consensus 113 ~~P~s~~sf~~yl~~~~rl-~~-------f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~ 184 (501)
T 4b63_A 113 RDPRSSFTFLNYLHQKGRL-IH-------FTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVD 184 (501)
T ss_dssp TCTTCTTSHHHHHHHHTCH-HH-------HHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBC
T ss_pred cCCCCccchHHHHHHhCCc-cC-------CccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccc
Confidence 000000000 111111100 00 01123445788999999999998888889999999999864332 2
Q ss_pred EEEEEecccccccCCceecccccCeEEecCEEEEccCC
Q psy14496 165 VCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202 (561)
Q Consensus 165 v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~ 202 (561)
.+.|++.+. .+|+ ..++.|+.||.|+|.
T Consensus 185 ~~~V~~~~~---~~g~-------~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 185 FFTVRSRNV---ETGE-------ISARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEET---TTCC-------EEEEEEEEEEECCCC
T ss_pred eEEEEEecC---CCce-------EEEEEeCEEEECcCC
Confidence 466776542 2222 257899999999993
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=1.5e-08 Score=106.02 Aligned_cols=41 Identities=46% Similarity=0.713 Sum_probs=37.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
.++||+||||||||+++|+.|++. |++|+|||+.+.+|+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL------GFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSCCSH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCccccc
Confidence 468999999999999999999999 99999999998777653
No 118
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.78 E-value=1.3e-08 Score=106.48 Aligned_cols=37 Identities=41% Similarity=0.745 Sum_probs=33.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
++||+||||||||+++|+.|++. |++|+|||+. ..|+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~------G~~V~liE~~-~~gG 39 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL------GLSTAIVEPK-YWGG 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-CTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-CCCC
Confidence 58999999999999999999999 9999999998 4443
No 119
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=98.78 E-value=2.2e-09 Score=81.95 Aligned_cols=55 Identities=18% Similarity=0.275 Sum_probs=46.4
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.+.|+.|. ++.|+.+||.+++++.+ ..+.+|.+.|++||.|..+||++||+++
T Consensus 3 i~~~~C~~c~----C~~C~~~Cp~~ai~~~~-----~~~~~~~~~C~~Cg~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 3 VITEPCIGTK----DASCVEVCPVDCIHEGE-----DQYYIDPDVCIDCGACEAVCPVSAIYHE 57 (77)
T ss_dssp ECCSTTTTCC----CCSSTTTCTTCCEEECS-----SSEEECTTTCCSCCSHHHHSGGGSSEET
T ss_pred EeCccCCCCC----cchhHHhcccccEEeCC-----CcEEECcccCcCccCCHhhcCccceEec
Confidence 4678898752 47899999999988753 2478899999999999999999999974
No 120
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=98.77 E-value=2e-09 Score=87.72 Aligned_cols=56 Identities=21% Similarity=0.291 Sum_probs=45.8
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
+|.+.|+.|. .+.|+.+||.+++++.+ ..+.+|.+.|++||.|..+||++||++..
T Consensus 3 ~~~~~C~~C~----~~~C~~~CP~~ai~~~~-----~~~~i~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 3 VVTDNCIKCK----YTDCVEVCPVDCFYEGP-----NFLVIHPDECIDCALCEPECPAQAIFSED 58 (106)
T ss_dssp EECGGGTTTC----CCHHHHHCTTCCEEECS-----SCEEECTTTCCCCCTTGGGCTTCCEEEGG
T ss_pred ECccccCCcc----CcHHHHHcCccceEcCC-----CcEEECcccCCChhhhHHhCCChhhhccc
Confidence 4667888832 12899999999988754 25789999999999999999999999853
No 121
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=98.77 E-value=1.5e-09 Score=88.09 Aligned_cols=64 Identities=22% Similarity=0.383 Sum_probs=50.1
Q ss_pred CceEEcCCCCcccccccccccccccccCCeeEEEEeecC----ceeEEEEccCCCccCCcccccCCCCCeeEECC
Q psy14496 480 IHLILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKN----KIQHLQINAQNCIHCKTCDIKDPTQNIEWITP 550 (561)
Q Consensus 480 ~h~~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~----~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~p 550 (561)
.++. +|.+.|+. ++.|+.+||.+++++.+..+ ....+.++.+.|++||.|..+||++||+|+.|
T Consensus 36 ~~~~-id~~~C~~------Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 36 TIVG-VDFDLCIA------DGSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP 103 (103)
T ss_dssp SSEE-EETTTCCC------CCHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred ceEE-EehhhCCC------hhhHHHHcCccCeecccccCccccccceeecCcccccChhhHHHhccccceEecCC
Confidence 3443 47788988 57899999999998865321 11245678999999999999999999999765
No 122
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=98.76 E-value=1.6e-09 Score=82.93 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
|.+.|+.|. ++.|+.+||.+++++.+ ..+.+|.+.|++||.|..+||++||+++.
T Consensus 4 ~~~~C~~c~----C~~C~~~CP~~ai~~~~-----~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 58 (78)
T 1h98_A 4 ICEPCIGVK----DQSCVEVCPVECIYDGG-----DQFYIHPEECIDCGACVPACPVNAIYPEE 58 (78)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECS-----SSEEECTTTCCCCCTHHHHCTTCCEEEGG
T ss_pred EchhCCCCC----cChhhhhcCccceEcCC-----CEEEECcccCCcHhHHHHhCCccceEecc
Confidence 567787742 57899999999998753 24788999999999999999999999743
No 123
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.75 E-value=2.5e-08 Score=103.84 Aligned_cols=40 Identities=25% Similarity=0.536 Sum_probs=35.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
|+.||+||||||||+++|+.|++. .||++|+|||+.+.++
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVG 40 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCc
Confidence 346999999999999999999998 6689999999998765
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=2.7e-08 Score=103.60 Aligned_cols=38 Identities=50% Similarity=0.851 Sum_probs=34.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
+++||+||||||||+++|+.|++. |++|+|||+. ..|+
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~gG 39 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL------GQKVTIVEKG-NLGG 39 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECC-CCCC
Confidence 458999999999999999999999 9999999998 4554
No 125
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=98.75 E-value=2.6e-09 Score=82.57 Aligned_cols=54 Identities=20% Similarity=0.204 Sum_probs=46.3
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC------cccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK------TCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~~cp~~~i~~~ 548 (561)
++|.+.|+. ++.|+.+||.+++++.+ ..+.+|.+.|++|| .|..+||++||+|.
T Consensus 2 ~~~~~~C~~------C~~C~~~CP~~ai~~~~-----~~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (82)
T 3eun_A 2 LMITDECIN------CDVCEPECPNGAISQGD-----ETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKD 61 (82)
T ss_dssp EEECTTCCC------CCTTGGGCTTCCEEECS-----SSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEEC
T ss_pred eEeCCCCcC------ccchHHHCChhheEcCC-----CceEEchhhcCCCCCCCCccHHHHhCCccceEEc
Confidence 346788988 57899999999998753 25789999999999 99999999999985
No 126
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.74 E-value=8e-09 Score=107.98 Aligned_cols=41 Identities=29% Similarity=0.657 Sum_probs=37.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+++||+||||||||+++|+.|++. |++|+||||.+.+|+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~------G~~V~liEk~~~~GG~~ 43 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA------KYNVLMADPKGELGGNC 43 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECTTSSSSHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCcc
Confidence 469999999999999999999999 99999999888887653
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.74 E-value=1.3e-08 Score=105.30 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=33.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSEL 63 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~~ 63 (561)
|.+||+|||||+||+++|..|++. |+ +|+|||+.+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~------g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS------GWEGNIRLVGDATVI 41 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCCSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc------CcCCCEEEEECCCCC
Confidence 578999999999999999999999 88 79999988654
No 128
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=98.73 E-value=3.5e-09 Score=86.16 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=46.4
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.+.|+.|. ++.|+.+||.+++.+.+ ..+.+|.+.|++||.|..+||++||++.
T Consensus 3 i~~~~C~~C~----c~~C~~~CP~~ai~~~~-----~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~ 57 (105)
T 2v2k_A 3 VIAEPCVDVK----DKACIEECPVDCIYEGA-----RMLYIHPDECVDCGACEPVCPVEAIYYE 57 (105)
T ss_dssp EECGGGTTTC----CCHHHHHCTTCCEEECS-----SCEEECTTTCCCCCCSGGGCTTCCEEEG
T ss_pred EecccCCCCC----cChhhhhcCccccCcCC-----CcEEEeCCcCcchhhHHHhCCccCEEec
Confidence 3567898753 58899999999998753 2478899999999999999999999985
No 129
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.73 E-value=2.4e-08 Score=104.70 Aligned_cols=41 Identities=41% Similarity=0.700 Sum_probs=37.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
++++||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~ 44 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQL------GFKTVCIEKNETLGGT 44 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSSHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCcCCc
Confidence 4579999999999999999999999 9999999999877664
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=7.6e-08 Score=99.39 Aligned_cols=58 Identities=16% Similarity=0.301 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCC
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
+.|.+.|.+.+++.|++|+.+++|++|..++++++++|++.+ |.+++||.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 588899999999999999999999999885578889998843 5689999999999965
No 131
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=98.72 E-value=3.6e-09 Score=74.83 Aligned_cols=51 Identities=22% Similarity=0.338 Sum_probs=42.8
Q ss_pred CCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 487 KKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 487 ~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.+.|+. ++.|+.+||.+++++.++ .+.+|.+.|++||.|..+||++||+++
T Consensus 5 ~~~C~~------C~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~C~~~CP~~ai~~~ 55 (55)
T 2fdn_A 5 NEACIS------CGACEPECPVNAISSGDD-----RYVIDADTCIDCGACAGVCPVDAPVQA 55 (55)
T ss_dssp CTTCCC------CCTTGGGCTTCCEECCSS-----SCEECTTTCCCCCHHHHTCTTCCEEEC
T ss_pred cccCcC------hhhHHHHCCccccCcCCC-----EEEeccccCcChhChHHHccccceecC
Confidence 467877 577999999999876531 367899999999999999999999873
No 132
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.72 E-value=1.3e-08 Score=73.08 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=42.9
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEE-EccCCCccCCcccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQ-INAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~-~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
+|.+.|+. ++.|+.+|| .++++..+ .+ .... ++.+.|..||.|..+||++||+|+
T Consensus 4 i~~~~C~~------C~~C~~~Cp-~~~~~~~~-~~-~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 4 IDHEECIG------CESCVELCP-EVFAMIDG-EE-KAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp ESSCCCSS------CCGGGGTST-TTEEEEEC-SS-CEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred EChhhCcC------hhHHHHHCC-HHheecCC-CC-cEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 37788987 577999999 58887322 12 2333 599999999999999999999984
No 133
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.70 E-value=8.9e-09 Score=106.85 Aligned_cols=40 Identities=28% Similarity=0.550 Sum_probs=36.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
...+||+|||||||||++|+.|++. |++|+|||+.+.+|+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~------G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK------GYEVHVYDRYDRMGG 159 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSCST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEeccCCCCC
Confidence 3568999999999999999999999 999999999987765
No 134
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.70 E-value=2.9e-08 Score=103.87 Aligned_cols=40 Identities=43% Similarity=0.785 Sum_probs=36.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
|++||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~~GG~ 40 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQL------GMKTACVEKRGALGGT 40 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCc
Confidence 468999999999999999999999 9999999999877664
No 135
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.68 E-value=4.3e-08 Score=102.11 Aligned_cols=39 Identities=46% Similarity=0.814 Sum_probs=35.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
++||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~ 39 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL------GMKVGVVEKEKALGGT 39 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHH
T ss_pred CCCEEEECCChhHHHHHHHHHHC------CCeEEEEeCCCCCCCc
Confidence 37999999999999999999999 9999999999777654
No 136
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.68 E-value=7.7e-08 Score=100.01 Aligned_cols=39 Identities=38% Similarity=0.587 Sum_probs=34.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
.+||+|||||||||++|+.|++. .++++|+|||+.+..+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL----KPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh----CcCCCEEEEECCCccc
Confidence 47999999999999999999998 5578999999988654
No 137
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.67 E-value=5.8e-08 Score=101.78 Aligned_cols=41 Identities=37% Similarity=0.611 Sum_probs=37.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
++|||+||||||||+++|+.|++. |++|+|||+.+.+++..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL------GLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCEEEEEeCCCccCCCC
Confidence 579999999999999999999999 99999999998666544
No 138
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.67 E-value=3.9e-08 Score=104.11 Aligned_cols=36 Identities=44% Similarity=0.682 Sum_probs=33.3
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
+.+|||+||||||||+++|+.|++. |++|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~------G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY------GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeccC
Confidence 3469999999999999999999999 99999999965
No 139
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=98.66 E-value=8.4e-09 Score=79.70 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=45.6
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC------cccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK------TCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~~cp~~~i~~~ 548 (561)
++.+.|+. ++.|+.+||.+++++.+ ..+.+|.+.|+.|| .|..+||++||++.
T Consensus 3 ~~~~~C~~------C~~C~~~CP~~ai~~~~-----~~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (82)
T 2fgo_A 3 KITDDCIN------CDVCEPECPNGAISQGE-----EIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLD 61 (82)
T ss_dssp CCCTTCCC------CCTTGGGCTTCCEEECS-----SSEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBC
T ss_pred eeCCCCCC------hhhHHHHCChhccCCCC-----CeEEEEchhCccCCCcCCCCHhHhhCCcccEEcc
Confidence 46788987 56799999999998753 24788999999999 99999999999984
No 140
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.66 E-value=1.1e-07 Score=99.83 Aligned_cols=40 Identities=15% Similarity=0.303 Sum_probs=35.6
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCC---CcEEEEcCCCCCC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE---IKICVLEKGSELG 64 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G---~~V~ViEk~~~~g 64 (561)
.+|++||+||||||||+++|..|++. | .+|+|||+.+..+
T Consensus 32 ~~m~~dvvIIGaG~aGl~aA~~l~~~------g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 32 DRWGSKIVVVGANHAGTACIKTMLTN------YGDANEIVVFDQNSNIS 74 (490)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHH------HGGGSEEEEECSSSCCS
T ss_pred hccCCcEEEECCCHHHHHHHHHHHhc------CCCCCeEEEEECCCCCC
Confidence 34679999999999999999999998 7 9999999987653
No 141
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.66 E-value=5.3e-08 Score=98.88 Aligned_cols=111 Identities=22% Similarity=0.225 Sum_probs=71.3
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchh
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEE 98 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 98 (561)
.-.+..|+|||||+||+++|..|+.. +.+|+|||+.+..+.. ...+...+...
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~------~~~itlie~~~~~~y~--------~~~l~~~l~g~------------- 58 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGK------CDDITMINSEKYLPYY--------RPRLNEIIAKN------------- 58 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTT------CSCEEEECSSSSCCBC--------GGGHHHHHHSC-------------
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCC------CCEEEEEECCCCCCcc--------cChhhHHHcCC-------------
Confidence 34568999999999999999999666 9999999999875421 01111111000
Q ss_pred hhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC
Q psy14496 99 RFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE 178 (561)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~ 178 (561)
. ... ++...+.+..++.|++++.+++|+++..+ .+ .|.+.
T Consensus 59 --------~--~~~-------------------~l~~~~~~~~~~~~i~~~~~~~V~~id~~--~~--~v~~~------- 98 (385)
T 3klj_A 59 --------K--SID-------------------DILIKKNDWYEKNNIKVITSEFATSIDPN--NK--LVTLK------- 98 (385)
T ss_dssp --------C--CGG-------------------GTBSSCHHHHHHTTCEEECSCCEEEEETT--TT--EEEET-------
T ss_pred --------C--CHH-------------------HccCCCHHHHHHCCCEEEeCCEEEEEECC--CC--EEEEC-------
Confidence 0 000 00001223334679999999999999753 22 34443
Q ss_pred CceecccccCeEEecCEEEEccCCCc
Q psy14496 179 GIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 179 g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+|.++.+|.||+|+|...
T Consensus 99 --------~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 99 --------SGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp --------TSCEEECSEEEECCCEEE
T ss_pred --------CCCEEECCEEEEecCCCc
Confidence 356899999999999643
No 142
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.65 E-value=6.6e-08 Score=101.54 Aligned_cols=38 Identities=24% Similarity=0.562 Sum_probs=34.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
++||+|||||||||++|+.|++. |++|+|||+ ..+|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk-~~~GG~ 63 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL------GKRVAIAEE-YRIGGT 63 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT------TCCEEEEES-SCTTHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------cCEEEEEeC-CCCCCc
Confidence 59999999999999999999999 999999999 455553
No 143
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.64 E-value=5.7e-08 Score=102.40 Aligned_cols=41 Identities=24% Similarity=0.548 Sum_probs=35.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCC-CCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNK-EIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~-G~~V~ViEk~~~~g~~ 66 (561)
|++||+||||||||+++|+.|++. .| |++|+|||+.+ .|+.
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~----~~~G~~V~liE~~~-~GG~ 42 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATS----HPETTQVTVIDCDG-IGGA 42 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHH----CTTTEEEEEEESSC-TTHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCCcCEEEEEeCCC-cCCc
Confidence 468999999999999999999998 55 89999999988 6654
No 144
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.62 E-value=8.2e-09 Score=91.01 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=48.8
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
.+|.+.|+.|.... ...|+.+||.+++++.++ +...+.+|++.|++||.|..+||++||++..
T Consensus 3 ~id~~~C~gC~~c~-~~~C~~~CP~~ai~~~~~--~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 65 (166)
T 3gyx_B 3 YVDPSKCDGCKGGE-KTACMYICPNDLMILDPE--EMKAFNQEPEACWECYSCIKICPQGAITARP 65 (166)
T ss_dssp EECTTTCCCCCSSS-CCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCSSCCEEECC
T ss_pred EEcchhcCCCCCCC-cchhHHhCCccccEEecC--CceeEecCcccCcccChHhHhCCccceEEec
Confidence 35788998842100 228999999999988653 2245678999999999999999999998753
No 145
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.62 E-value=8.1e-08 Score=103.46 Aligned_cols=42 Identities=31% Similarity=0.509 Sum_probs=36.7
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
.++..||+|||||||||++|+.|++. .+|++|+|||+.+..+
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRL----SEEDEIIMVERGEYIS 74 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCSS
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhh----CcCCCEEEEECCCCcc
Confidence 34568999999999999999999998 5689999999998764
No 146
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=98.62 E-value=9.1e-09 Score=89.15 Aligned_cols=57 Identities=18% Similarity=0.259 Sum_probs=47.5
Q ss_pred EcCCCCccccccccccc-----ccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAG-----PEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~-----~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++|.+.|+. |+ .|+.+||.++++++++ +.+.+.+|.+.|++||.|..+||++||++.
T Consensus 4 ~vd~~~C~~------C~~~~~~~C~~~CP~~ai~~~~~--~~~~~~id~~~C~~Cg~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 4 FVNPEKCDG------CKALERTACEYICPNDLMTLDKE--KMKAYNREPDMCWECYSCVKMCPQGAIDVR 65 (150)
T ss_dssp EECTTTCCS------CCSSSSCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCTTCCEEEC
T ss_pred EECcccCCC------CCCcccccchhhcCccCeEEecC--CceeeeeCcccCcCHhHHHHhCCccceEec
Confidence 357788988 45 8999999999988643 223567899999999999999999999875
No 147
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.62 E-value=4.8e-08 Score=101.97 Aligned_cols=39 Identities=26% Similarity=0.583 Sum_probs=35.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
+++||+||||||+||++|+.|++. |++|+|||+ ..+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~------G~~V~liEk-~~~GG~ 42 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL------GKKVAIAEE-FRYGGT 42 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEEES-SCTTHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC------CCEEEEEeC-CCCCCc
Confidence 469999999999999999999999 999999999 556553
No 148
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=98.62 E-value=7.6e-09 Score=79.53 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=45.1
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC------cccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK------TCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~~cp~~~i~~~ 548 (561)
++.+.|+. ++.|+.+||.+++++.+. .+.+|.+.|+.|| .|..+||++||++.
T Consensus 3 ~~~~~C~~------C~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 3 YINDDCTA------CDACVEECPNEAITPGDP-----IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CCCSCCCC------CCTTTTTCTTCCEECCSS-----SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred EeCCCCcC------hhhHHHHcChhccCcCCC-----eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 46788987 567999999999887532 4678999999999 99999999999884
No 149
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.60 E-value=3e-07 Score=99.10 Aligned_cols=39 Identities=36% Similarity=0.568 Sum_probs=35.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
+.+||+|||||+||+++|+.|++. |++|+|||+.+..++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~------G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA------GYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC------CCcEEEEeccCCCCC
Confidence 469999999999999999999999 999999999987764
No 150
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.59 E-value=5e-08 Score=100.33 Aligned_cols=39 Identities=36% Similarity=0.547 Sum_probs=34.8
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCc--EEEEcCCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIK--ICVLEKGSELG 64 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~--V~ViEk~~~~g 64 (561)
++.+||+|||||+||+++|..|++. |++ |+|||+.+...
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~ 47 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQN------GFEGRVLVIGREPEIP 47 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT------TCCSCEEEEESSSSCC
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc------CcCCCEEEEecCCCCC
Confidence 3568999999999999999999999 877 99999987653
No 151
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.59 E-value=1.9e-07 Score=95.74 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=32.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCc--EEEEcCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIK--ICVLEKGSELG 64 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~--V~ViEk~~~~g 64 (561)
|..+|+|||||+||+++|..|++. |++ |+|||+.+..+
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~------g~~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAE------GFEGRISLIGDEPHLP 40 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEEECSSSSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHcc------CcCCeEEEEECCCCCC
Confidence 346999999999999999999999 877 99999987653
No 152
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.58 E-value=1.4e-07 Score=99.13 Aligned_cols=35 Identities=31% Similarity=0.582 Sum_probs=32.9
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
.++|||+||||||||+++|+.|++. |++|+||||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~------G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL------GKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEEec
Confidence 4679999999999999999999999 9999999983
No 153
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.58 E-value=2.6e-08 Score=105.44 Aligned_cols=46 Identities=30% Similarity=0.482 Sum_probs=39.9
Q ss_pred CCCCCCcccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcCCCCCCCce
Q psy14496 16 GPRESIEYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 16 ~~~~~~~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
|.+..|.+||||||||++||+||+.|++ . |++|+|||+++.+||..
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~------G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQID------GPSWMIVDSNETPGGLA 50 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHC------CSCEEEEESSSSCCGGG
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhC------CCCEEEEECCCCCcCCe
Confidence 3345678999999999999999999987 5 89999999999999864
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=1.7e-07 Score=97.70 Aligned_cols=40 Identities=43% Similarity=0.728 Sum_probs=35.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
+.++||+||||||||+++|+.|++. |++|+|||+ ...|+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~-~~~GG~ 42 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQL------GIPTVLVEG-QALGGT 42 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHH------TCCEEEECS-SCTTHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEcc-CCCCCc
Confidence 3569999999999999999999999 999999999 556553
No 155
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.57 E-value=3.4e-08 Score=102.07 Aligned_cols=38 Identities=26% Similarity=0.595 Sum_probs=32.6
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|..+|+|||||+||+++|..|++. .++++|+|||+.+.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~----~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPY 38 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSE
T ss_pred CCCcEEEECCCHHHHHHHHHHhcc----CcCCeEEEEcCCCC
Confidence 456899999999999999999988 44689999998864
No 156
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.57 E-value=1.8e-07 Score=97.82 Aligned_cols=39 Identities=26% Similarity=0.481 Sum_probs=32.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
..||+|||||+|||++|+.|++. .+|++|+|||+.+..+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCccc
Confidence 47999999999999999999988 6689999999998764
No 157
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.57 E-value=1.7e-07 Score=97.85 Aligned_cols=39 Identities=21% Similarity=0.514 Sum_probs=35.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.++||+||||||||+++|+.|++. |++|+|||+. .+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~GG~ 41 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ------GAQVTLIERG-TIGGT 41 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-STTHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-CCCcc
Confidence 368999999999999999999999 9999999998 56654
No 158
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1.7e-07 Score=98.19 Aligned_cols=39 Identities=31% Similarity=0.592 Sum_probs=34.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.++||+||||||||+++|+.|++. |++|+|||+. ..|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~ 48 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY------GAKTLLVEAK-ALGGT 48 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------SCCEEEEESS-CTTHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCCc
Confidence 469999999999999999999999 9999999997 45543
No 159
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.56 E-value=4.6e-07 Score=99.67 Aligned_cols=41 Identities=41% Similarity=0.690 Sum_probs=37.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
...+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNF------GIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEecccceece
Confidence 3468999999999999999999999 9999999999888774
No 160
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.56 E-value=1.9e-07 Score=97.94 Aligned_cols=40 Identities=35% Similarity=0.678 Sum_probs=35.0
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
++.+||+||||||||+++|+.|++. |++|+|||+. ..|+.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~liE~~-~~GG~ 57 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL------GARAAVVESH-KLGGT 57 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCc
Confidence 3469999999999999999999999 9999999976 44543
No 161
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.54 E-value=5.8e-08 Score=100.57 Aligned_cols=34 Identities=24% Similarity=0.472 Sum_probs=31.9
Q ss_pred ccEEEECchhHHHHHHHHHHh---ccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQ---LAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~---~~~~~~~G~~V~ViEk~~~ 62 (561)
.||+|||||+||+++|..|++ . |++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~------g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS------GHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG------GSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC------cCEEEEEeCCCC
Confidence 699999999999999999999 6 999999999874
No 162
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.54 E-value=7.7e-08 Score=99.43 Aligned_cols=40 Identities=28% Similarity=0.637 Sum_probs=33.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
|..||+|||||+||+++|+.|++. .+|++|+|||+.+..+
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~----~~g~~Vtlie~~~~~~ 40 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFG 40 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEE
T ss_pred CCCCEEEECccHHHHHHHHHHHcC----CCCCeEEEECCCCCCC
Confidence 457999999999999999999993 1289999999987643
No 163
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.54 E-value=1.2e-07 Score=99.00 Aligned_cols=38 Identities=45% Similarity=0.834 Sum_probs=34.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
++||+||||||||+++|..|++. |++|+|||+.+ .|+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~------g~~V~lie~~~-~GG~ 43 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL------GLKVLAVEAGE-VGGV 43 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCC
Confidence 59999999999999999999999 99999999987 5543
No 164
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.54 E-value=2.1e-07 Score=98.35 Aligned_cols=38 Identities=21% Similarity=0.566 Sum_probs=34.3
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+.+|||+||||||||+++|+.++++ |.+|+|+|+.+.
T Consensus 39 ~~ydYDviVIG~GpaG~~aA~~aa~~------G~kValIE~~~~ 76 (542)
T 4b1b_A 39 HTYDYDYVVIGGGPGGMASAKEAAAH------GARVLLFDYVKP 76 (542)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecccc
Confidence 34579999999999999999999999 999999998653
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.53 E-value=1.5e-07 Score=95.65 Aligned_cols=35 Identities=17% Similarity=0.375 Sum_probs=31.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC--CcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE--IKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G--~~V~ViEk~~ 61 (561)
+.+||+||||||||+++|+.|++. | .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL------DGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT------CSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhh------CCCCCEEEEECCC
Confidence 358999999999999999999999 7 6799999875
No 166
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.53 E-value=3e-07 Score=100.73 Aligned_cols=42 Identities=36% Similarity=0.607 Sum_probs=37.9
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
...+||+|||||||||++|+.|++. |++|+|||+.+..|+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~------G~~V~liE~~~~~GG~~ 430 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR------GYDVVLAEAGRDLGGRV 430 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCEe
Confidence 3468999999999999999999999 99999999998887653
No 167
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.52 E-value=2.5e-07 Score=96.93 Aligned_cols=38 Identities=29% Similarity=0.601 Sum_probs=33.6
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
+||+||||||||+++|+.|++. .+|.+|+|||+.+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN----DENANVVTLEKGEIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEECSSSCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 6999999999999999999986 3489999999987653
No 168
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=98.52 E-value=4.2e-08 Score=88.52 Aligned_cols=58 Identities=26% Similarity=0.268 Sum_probs=46.6
Q ss_pred CCCCcccccccccccccccccCCeeEEEEeecC-----------ceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYEFIIEKN-----------KIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~-----------~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
|.+.|+. |+.|+.+||.+++.+..... ....+.++.+.|+.||.|..+||++||.+..
T Consensus 49 d~~~Ci~------C~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 117 (182)
T 3i9v_9 49 GLEKCIG------CSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGY 117 (182)
T ss_dssp SCBSCCC------CCHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEECS
T ss_pred CCccCcc------cccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChhChhhhCCccceEecC
Confidence 4578988 57899999999998865421 1135678999999999999999999999853
No 169
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.52 E-value=2e-07 Score=95.50 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=33.7
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSEL 63 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~~ 63 (561)
.+.+||+||||||||+++|..|++. |+ +|+|||+.+..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQA------GYQGLITVVGDEAER 44 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHH------TCCSCEEEEESSCSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc------CCCCeEEEEECCCCC
Confidence 4678999999999999999999999 87 59999998754
No 170
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.51 E-value=3e-07 Score=96.61 Aligned_cols=32 Identities=25% Similarity=0.614 Sum_probs=30.7
Q ss_pred CcccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLE 58 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViE 58 (561)
.++||+||||||||+++|+.|++ . |++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH------KKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc------CCEEEEEe
Confidence 46899999999999999999999 9 99999999
No 171
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.50 E-value=8e-09 Score=75.61 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=43.3
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEc--cCCCccCCcccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQIN--AQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~--~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
+|.+.|+. ++.|+.+|| ++|++.++. + +...++ .+.|++|+.|..+||++||++.
T Consensus 6 id~~~C~~------Cg~C~~~CP-~~~~~~~~~-~-~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 6 VDQDECIA------CESCVEIAP-GAFAMDPEI-E-KAYVKDVEGASQEEVEEAMDTCPVQCIHWE 62 (64)
T ss_dssp ECSTTCCS------CCHHHHHCT-TTEEECSSS-S-SEEECCGGGSCHHHHHHHHHHSSSCCEECC
T ss_pred EccccCCC------chHHHHhCC-ccEeEcCCC-C-EEEEecCCCcchhHHHHHHHhCCHhhEeee
Confidence 47788988 578999999 898875321 2 234444 7999999999999999999873
No 172
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.49 E-value=2.9e-07 Score=97.53 Aligned_cols=42 Identities=26% Similarity=0.507 Sum_probs=37.6
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.+.++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~ 81 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAM------GGRQLIVDRWPFLGGS 81 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSCH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCc
Confidence 34569999999999999999999999 9999999999866664
No 173
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=2.3e-07 Score=93.60 Aligned_cols=35 Identities=34% Similarity=0.542 Sum_probs=31.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
..||+||||||||+++|..|++. | +|+|||+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~------g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT------Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc------C-CEEEEECCCCC
Confidence 36999999999999999999999 9 99999998754
No 174
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.48 E-value=5.4e-07 Score=102.09 Aligned_cols=120 Identities=18% Similarity=0.251 Sum_probs=77.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
..+||+||||||||+++|+.|++. |++|+|||+.+.+|+..... +.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~------G~~V~lie~~~~~GG~~~~~------------~k---------------- 172 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS------GARVMLLDERAEAGGTLLDT------------AG---------------- 172 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGGGS------------SC----------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCCCceeccC------------Cc----------------
Confidence 368999999999999999999999 99999999998876532100 00
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
..++ . ....++...+.+.+.+. +++++.+++|.++.. ++.+..+......
T Consensus 173 --------~~i~------------~--~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~--~~~~~~v~~~~~~----- 223 (965)
T 2gag_A 173 --------EQID------------G--MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYD--ANYLIAAQRRTVH----- 223 (965)
T ss_dssp --------CEET------------T--EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEET--TTEEEEEEECSTT-----
T ss_pred --------cccC------------C--CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeec--CCceeeeEeeccc-----
Confidence 0000 0 01224455566666664 899999999988853 3333333321100
Q ss_pred ceeccc------ccCeEEecCEEEEccCCCc
Q psy14496 180 IIKKNF------QLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 180 ~~~~~f------~~g~~i~ad~vV~AdG~~s 204 (561)
..+.. +++.++.+|.||+|+|...
T Consensus 224 -~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 224 -LDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp -CSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred -ccccccccCCCCceEEEECCEEEECCCCcc
Confidence 00000 1234789999999999754
No 175
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.47 E-value=4.3e-07 Score=94.69 Aligned_cols=39 Identities=28% Similarity=0.623 Sum_probs=34.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.++||+||||||||+++|+.|++. |++|+|||+. ..|+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~ 41 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF------GKRVALIESK-ALGGT 41 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCcEEEEcCC-CCCCc
Confidence 368999999999999999999999 9999999997 45543
No 176
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=98.47 E-value=2.1e-08 Score=78.05 Aligned_cols=53 Identities=23% Similarity=0.280 Sum_probs=44.8
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC------cccccCCC-CCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK------TCDIKDPT-QNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg------~C~~~cp~-~~i~~~ 548 (561)
++.+.|+. ++.|+.+||.+++++.+ ..+.+|.++|++|| .|..+||+ +||++.
T Consensus 3 ~~~~~C~~------C~~C~~~CP~~ai~~~~-----~~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 3 LITKKCIN------CDMCEPECPNEAISMGD-----HIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp EECTTCCC------CCTTTTTCTTCCEECCS-----SSCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred EeCCcCcC------hhHHHHHCchhccCcCC-----CceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 35678987 56799999999988753 24678999999999 99999999 999884
No 177
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=1.9e-07 Score=98.38 Aligned_cols=39 Identities=38% Similarity=0.766 Sum_probs=34.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
|++||+||||||||+++|+.|++. |++|+|||+.+ .|+.
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~-~GG~ 39 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARH------NAKVALVEKSR-LGGT 39 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSS-TTHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCC-cCcc
Confidence 569999999999999999999999 99999999984 4443
No 178
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.47 E-value=2.2e-07 Score=97.67 Aligned_cols=39 Identities=33% Similarity=0.549 Sum_probs=34.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.+|||+||||||||+++|+.|++. |++|+|||+.+ +|+.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liE~~~-~GGt 45 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKH------TDKVVLIEGGA-YGTT 45 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------CSCEEEEESSC-SSCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCC-CCCc
Confidence 359999999999999999999999 99999999975 5553
No 179
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.45 E-value=1.1e-06 Score=89.91 Aligned_cols=35 Identities=29% Similarity=0.582 Sum_probs=32.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSEL 63 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~~ 63 (561)
.||+|||||+||+++|..|++. |+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA------KYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh------CcCCCEEEEeCCCCC
Confidence 5899999999999999999999 88 89999998854
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=4.8e-07 Score=93.92 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=33.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
+||+|||||+||+++|..|++. .+|++|+|||+.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHh----CcCCeEEEEECCCccC
Confidence 4899999999999999999987 4589999999987654
No 181
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.45 E-value=5.2e-07 Score=94.82 Aligned_cols=33 Identities=21% Similarity=0.541 Sum_probs=31.0
Q ss_pred CcccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEK 59 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk 59 (561)
+++||+||||||||+++|+.|++ . |++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhc------CCeEEEEec
Confidence 36999999999999999999999 9 999999993
No 182
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.44 E-value=9.8e-08 Score=97.94 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=32.1
Q ss_pred ccEEEECchhHHHHHHHHHHh---ccccCCCCCcEEEEcCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQ---LAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~---~~~~~~~G~~V~ViEk~~~~ 63 (561)
.||+|||||+|||++|+.|++ . |++|+|||+.+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~------g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS------KADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG------GSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC------CCeEEEEeCCCCc
Confidence 479999999999999999999 7 9999999998753
No 183
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.44 E-value=6.7e-07 Score=93.80 Aligned_cols=35 Identities=31% Similarity=0.574 Sum_probs=32.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
+++|||+||||||||+++|+.|++. |++|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN------GARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCEEEEEEec
Confidence 4579999999999999999999999 9999999963
No 184
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.43 E-value=1.8e-06 Score=92.53 Aligned_cols=38 Identities=32% Similarity=0.587 Sum_probs=34.2
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
.||+|||||||||++|..|++. .++++|+|||+.+..+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~----~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL----SETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCCcc
Confidence 4899999999999999999998 5679999999998764
No 185
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.42 E-value=3.4e-07 Score=95.20 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=34.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
+||+||||||||+++|..|++. .+|++|+|||+.+..+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD----HPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 5899999999999999999987 5689999999987653
No 186
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.42 E-value=5.1e-07 Score=93.75 Aligned_cols=39 Identities=33% Similarity=0.579 Sum_probs=34.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
.++||+||||||||+++|+.|++. |++|+|||+. ..|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~ 41 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY------GQKCALIEAK-ELGGT 41 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESS-CTTHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC------CCeEEEEcCC-CCCCc
Confidence 368999999999999999999999 9999999997 45543
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.42 E-value=1.8e-06 Score=87.68 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=77.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~~---------------------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG------GYQLDVVAPCEQVMPGL---------------------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCcchhhcc----------------------------------
Confidence 46899999999999999999999 99999999876542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
.+ ..+.+.|.+.+++.|++++++++|+++..+++ .+.|.+.
T Consensus 185 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~---------- 225 (384)
T 2v3a_A 185 --------------LH-------------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLS---------- 225 (384)
T ss_dssp --------------SC-------------HHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEEC----------
Confidence 00 13456677777788999999999999976422 2445553
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||.|+|.++..
T Consensus 226 -----~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 226 -----DGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp -----TSCEEEESEEEECSCEEECC
T ss_pred -----CCCEEECCEEEECcCCCcCH
Confidence 35689999999999988764
No 188
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.42 E-value=1.2e-07 Score=108.12 Aligned_cols=58 Identities=17% Similarity=0.325 Sum_probs=46.8
Q ss_pred EcCCCCcccccccccccccccccCC---eeEEEEeecCceeEEEEccCCCccCCcccccCCC-CCeeEECCC
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPA---GVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPT-QNIEWITPE 551 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~---~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~-~~i~~~~p~ 551 (561)
.+|.+.|+. |+.|+.+||. +++++.+. .....++ +.|++||.|..+||+ +||++.--+
T Consensus 947 ~id~~~C~~------Cg~C~~~CP~~~~~ai~~~~~---~~~~~~~-~~C~~Cg~C~~~CP~~~Ai~~~~~~ 1008 (1025)
T 1gte_A 947 VIDEEMCIN------CGKCYMTCNDSGYQAIQFDPE---THLPTVT-DTCTGCTLCLSVCPIIDCIRMVSRT 1008 (1025)
T ss_dssp EECTTTCCC------CCHHHHHHHHHSCSCEEECTT---TCCEEEC-TTCCCCCHHHHHCSSTTTEEEEECC
T ss_pred EEEcccCcc------cCHHHHhcCccccCCEEEeCC---CceEEeC-ccCCChhHHHhhCCCCCCEEEecCc
Confidence 468899988 5789999997 89887542 1246777 999999999999999 999986433
No 189
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.42 E-value=6.8e-07 Score=95.07 Aligned_cols=61 Identities=20% Similarity=0.379 Sum_probs=43.7
Q ss_pred HHHHHHHHHHCCCEEEcCceEeEEEEcC---CCCEEEEEecccccccCCceecccccCeEEecC-EEEEccCCCch
Q psy14496 134 VRWMGKKAENMGIDIFSGFSASEILYDS---KNNVCGIATNNFGINKEGIIKKNFQLGMELYAK-YTLFAEGSRGH 205 (561)
Q Consensus 134 ~~~L~~~a~~~gv~i~~g~~v~~i~~~~---~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad-~vV~AdG~~s~ 205 (561)
...|...+.+.|++|+.++.|++|..++ +++++||+..+ .+|+. .+++|+ -||+|.|+..+
T Consensus 230 ~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 230 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp HHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTTH
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccCC
Confidence 3444444445799999999999999863 56789998742 13321 467886 79999998765
No 190
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.41 E-value=1.9e-06 Score=88.05 Aligned_cols=100 Identities=20% Similarity=0.349 Sum_probs=79.6
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||+|+.|+-+|..|++. |.+|+++|+.+.+....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~~~~~----------------------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK------GLEVDVVELAPRVMARV----------------------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCcchhhc-----------------------------------
Confidence 5799999999999999999999 99999999886542100
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+ ++++.+|.+.
T Consensus 182 -------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~----------- 223 (404)
T 3fg2_P 182 -------------VT-------------PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLS----------- 223 (404)
T ss_dssp -------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-----------
T ss_pred -------------cC-------------HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeC-----------
Confidence 00 135566777788899999999999999764 5666677764
Q ss_pred cccccCeEEecCEEEEccCCCch
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 224 ----dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 224 ----DGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp ----TSCEEECSEEEECCCEEEC
T ss_pred ----CCCEEEcCEEEECcCCccC
Confidence 3668999999999998765
No 191
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.40 E-value=3.8e-07 Score=95.80 Aligned_cols=114 Identities=24% Similarity=0.347 Sum_probs=73.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
+.+||+|||||||||++|+.|++. ++|+|||+.+.+|+......
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-------~~V~vie~~~~~GG~~~~~~----------------------------- 150 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-------LTVALIEERGWLGGDMWLKG----------------------------- 150 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-------CCEEEECTTSSSSCSGGGTC-----------------------------
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-------CCEEEEeCCCCCCCeeeccc-----------------------------
Confidence 458999999999999999999764 79999999988765321000
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
. .... ++ . ...++...+.+.+ +.|++++.++.|.++..+ +..+. +...+ +++
T Consensus 151 ----~----~~~g--~~-------~---~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~-~~~~~-~~~~~-----~~~ 202 (493)
T 1y56_A 151 ----I----KQEG--FN-------K---DSRKVVEELVGKL-NENTKIYLETSALGVFDK-GEYFL-VPVVR-----GDK 202 (493)
T ss_dssp ----S----EETT--TT-------E---EHHHHHHHHHHTC-CTTEEEETTEEECCCEEC-SSSEE-EEEEE-----TTE
T ss_pred ----c----ccCC--CC-------C---CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcC-CcEEE-EEEec-----CCe
Confidence 0 0000 00 0 2334555555555 568999999999888764 33322 22211 111
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
-.++.+|.+|+|+|....
T Consensus 203 -------~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 203 -------LIEILAKRVVLATGAIDS 220 (493)
T ss_dssp -------EEEEEESCEEECCCEEEC
T ss_pred -------EEEEECCEEEECCCCCcc
Confidence 026899999999997543
No 192
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=98.40 E-value=3.8e-08 Score=70.31 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=42.1
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEc--cCCCccCCcccccCCCCCeeE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQIN--AQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~--~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
+| +.|+. ++.|+.+||. ++.+.++ + ..+.++ .+.|+.||.|..+||++||++
T Consensus 4 id-~~C~~------C~~C~~~CP~-~~~~~~~--~-~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 4 VN-DDCMA------CEACVEICPD-VFEMNEE--G-DKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CT-TTCCC------CCHHHHHCTT-TEEECSS--S-SSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred EC-CcCcc------chHHHHhCCc-cEEECCC--C-cEEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 47 88987 5789999998 7766432 2 346778 899999999999999999986
No 193
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.39 E-value=1e-06 Score=93.75 Aligned_cols=36 Identities=33% Similarity=0.616 Sum_probs=33.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~~ 62 (561)
.+||+||||||.||+++|..|++. + .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~------~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAEN------PNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTS------TTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhC------CCCcEEEEecCCC
Confidence 469999999999999999999988 6 89999999875
No 194
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.39 E-value=2.8e-06 Score=87.24 Aligned_cols=102 Identities=22% Similarity=0.317 Sum_probs=81.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. |.+|+|+|+.+.+-...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~l~~~---------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF------GVNVTLLEALPRVLARV---------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEecCCchhhhh----------------------------------
Confidence 45799999999999999999999 99999999887542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+ ++++.+|.+.
T Consensus 192 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~---------- 233 (415)
T 3lxd_A 192 --------------AG-------------EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQ---------- 233 (415)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEES----------
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeC----------
Confidence 00 135566777778899999999999999764 5677777774
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||.|.|.....
T Consensus 234 -----dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 234 -----DGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp -----SSCEEECSEEEECSCCEESC
T ss_pred -----CCCEEEcCEEEECCCCccCh
Confidence 35689999999999987663
No 195
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.36 E-value=3.7e-06 Score=86.74 Aligned_cols=112 Identities=15% Similarity=0.281 Sum_probs=83.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+|+.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~~---------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA------NMHVTLLDTAARVLERV---------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCccccch----------------------------------
Confidence 46899999999999999999999 99999999876541100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEc-CCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYD-SKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~-~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ +++++..|.+.
T Consensus 189 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~--------- 232 (431)
T 1q1r_A 189 --------------TA-------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE--------- 232 (431)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET---------
T ss_pred --------------hh-------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC---------
Confidence 00 134455677777889999999999999752 24566667663
Q ss_pred eecccccCeEEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
+|.++.+|.||.|.|..... .+.+..|++
T Consensus 233 ------~G~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 261 (431)
T 1q1r_A 233 ------DGTRLPADLVIAGIGLIPNC--ELASAAGLQ 261 (431)
T ss_dssp ------TSCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred ------CCCEEEcCEEEECCCCCcCc--chhhccCCC
Confidence 35689999999999987653 244445554
No 196
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.36 E-value=9.7e-08 Score=86.61 Aligned_cols=57 Identities=18% Similarity=0.316 Sum_probs=46.8
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
++.+.|..|. ..+|+.+||.+++.+.++ ..+.+|.++|++||.|..+||++||+|..
T Consensus 53 ~~~~~C~~C~----~p~C~~~CP~gAi~~~~~----g~~~id~~~CigC~~C~~~CP~~Ai~~~~ 109 (195)
T 2vpz_B 53 FRPEQCLHCE----NPPCVPVCPTGASYQTKD----GLVLVDPKKCIACGACIAACPYDARYLHP 109 (195)
T ss_dssp EEEEECCCCS----SCTTTTTCSSSCEEECTT----SCEEECTTTCCCCCHHHHHCTTCCCEECT
T ss_pred ECcccCcCcc----CcHHHHhcCCCceecccc----cceeecCCCCCCcChhHhhCCCCCeEECC
Confidence 4667788743 237999999999887532 36889999999999999999999999954
No 197
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.35 E-value=1.9e-06 Score=89.67 Aligned_cols=99 Identities=23% Similarity=0.298 Sum_probs=75.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+...
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~------g~~V~lv~~~~~~l~~----------------------------------- 205 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL------GAEVIVLEYMDRILPT----------------------------------- 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
. ...+.+.|.+.+++.|++++++++|+++..+++ .+.|.+.
T Consensus 206 --------------~-------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v~v~~~---------- 246 (455)
T 2yqu_A 206 --------------M-------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK--GARVELE---------- 246 (455)
T ss_dssp --------------S-------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EEEEEET----------
T ss_pred --------------c-------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EEEEEEC----------
Confidence 0 013455566777778999999999999976422 2344442
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|+|.++.
T Consensus 247 -----~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 247 -----GGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp -----TSCEEEESEEEECSCEEEC
T ss_pred -----CCeEEEcCEEEECcCCCcC
Confidence 3568999999999997765
No 198
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.35 E-value=3.4e-07 Score=95.17 Aligned_cols=59 Identities=14% Similarity=0.107 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcC-CCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDS-KNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~-~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..+.+.|.+.+++.|++|+++++|+++..++ ++++++|.+. |.+++||.||.|.|.++.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccch
Confidence 4788899999999999999999999998752 5667777762 457999999999998754
No 199
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=98.34 E-value=1e-07 Score=95.80 Aligned_cols=59 Identities=17% Similarity=0.292 Sum_probs=47.1
Q ss_pred CCCCcccccccccccccccccCCeeEEEEeec-Cce--eEEEEccCCCccCCcccccCCCCCeeE
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYEFIIEK-NKI--QHLQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~-~~~--~~~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
|.+.|...|. +..|+.+||.+|+++.+.+ +++ +.+.+|.++|+.||.|..+||.+||+.
T Consensus 214 d~e~~~~~Ce---~~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~Cg~C~~~CP~~Ai~~ 275 (386)
T 3or1_B 214 DHENLAELCE---IPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLSD 275 (386)
T ss_dssp CTTTHHHHCC---HHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCCHHHHHCTTCCCCC
T ss_pred chhhhccccc---chhhhhhCchhhccccccccCCccccccccCCCcCCccccHHHhCcHhhCcC
Confidence 6677765443 5889999999999986532 232 579999999999999999999999853
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.34 E-value=4e-06 Score=88.68 Aligned_cols=111 Identities=17% Similarity=0.278 Sum_probs=83.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
..|+|||||..|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT------GRRTVMLVRTEPLKLI------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTTTC------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCeEEEEEecCccccc------------------------------------
Confidence 6899999999999999999999 9999999988653110
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCE--EEEEecccccccCCc
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNV--CGIATNNFGINKEGI 180 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v--~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.|.+.+++.|++++++++|+++..++++++ +.|.+.
T Consensus 253 -------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~--------- 297 (523)
T 1mo9_A 253 -------------KD-------------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTP--------- 297 (523)
T ss_dssp -------------CS-------------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEET---------
T ss_pred -------------cc-------------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEEC---------
Confidence 00 13456677778889999999999999986545544 344442
Q ss_pred eecccccCe-EEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 181 IKKNFQLGM-ELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 181 ~~~~f~~g~-~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
+|. ++.+|.||.|.|.++.... +++..|++
T Consensus 298 ------~G~~~i~aD~Vv~A~G~~p~~~~-~l~~~gl~ 328 (523)
T 1mo9_A 298 ------NGEMRIETDFVFLGLGEQPRSAE-LAKILGLD 328 (523)
T ss_dssp ------TEEEEEECSCEEECCCCEECCHH-HHHHHTCC
T ss_pred ------CCcEEEEcCEEEECcCCccCCcc-CHHHcCCc
Confidence 355 7999999999998877532 44444443
No 201
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.31 E-value=3.2e-06 Score=87.72 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=76.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 205 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL------GAKTHLFEMFDAPLPS----------------------------------- 205 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCEEEEEEeCCchhhh-----------------------------------
Confidence 46899999999999999999999 9999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.|.+.+++.|++++++++|+++..++++ .+.|.+.
T Consensus 206 --------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~---------- 247 (450)
T 1ges_A 206 --------------FD-------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDG-SLTLELE---------- 247 (450)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTS-CEEEEET----------
T ss_pred --------------hh-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCc-EEEEEEC----------
Confidence 00 024456677777789999999999999765333 2345553
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||.|+|..+..
T Consensus 248 -----~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 248 -----DGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -----TSCEEEESEEEECSCEEESC
T ss_pred -----CCcEEEcCEEEECCCCCcCC
Confidence 35689999999999976653
No 202
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.30 E-value=5.6e-07 Score=94.54 Aligned_cols=41 Identities=17% Similarity=0.432 Sum_probs=35.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g 64 (561)
+..+||+|||||+||+++|..|++. .++.+|+|||+.+..+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~----~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHH----STTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhc----CCCCeEEEEeCCCCCC
Confidence 4569999999999999999999876 4589999999987653
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.29 E-value=2.4e-06 Score=88.67 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=76.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
...+|+|||||++|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~--------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA------GKKVTVIDILDRPLGVY--------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT---------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCeEEEEecCccccccc---------------------------------
Confidence 357999999999999999999999 99999999986542100
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ +.+..|.++
T Consensus 189 ---------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~--------- 229 (447)
T 1nhp_A 189 ---------------LD-------------KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD--------- 229 (447)
T ss_dssp ---------------CC-------------HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES---------
T ss_pred ---------------CC-------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC---------
Confidence 00 135566777788889999999999999743 334344442
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|+|....
T Consensus 230 -------~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 230 -------KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp -------SCEEECSEEEECSCEEES
T ss_pred -------CCEEECCEEEECcCCCCC
Confidence 357999999999996654
No 204
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.29 E-value=1.5e-06 Score=88.87 Aligned_cols=36 Identities=31% Similarity=0.563 Sum_probs=31.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+|+|||||+||+++|..|++. .++.+|+|||+.+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~----~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhc----CcCCeEEEEeCCCC
Confidence 4699999999999999999988 44579999998764
No 205
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.29 E-value=5.2e-07 Score=91.25 Aligned_cols=44 Identities=27% Similarity=0.491 Sum_probs=39.7
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
.....+||+|||||++||++|+.|++. |++|+|+|+++.+|+..
T Consensus 25 ~~~~~~dv~IIGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 25 QESKGFDYLIVGAGFAGSVLAERLASS------GQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGG
T ss_pred ccCCCCCEEEECccHHHHHHHHHHHHC------CCceEEEeccCCCCCcc
Confidence 345679999999999999999999999 99999999998888764
No 206
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.28 E-value=4e-07 Score=96.41 Aligned_cols=41 Identities=37% Similarity=0.499 Sum_probs=38.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~~~g~~~ 67 (561)
+.+||+|||||+|||+||+.|++. | ++|+|||++..+|+++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~------G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN------GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT------TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc------CCCCEEEEeCCCCCCCce
Confidence 468999999999999999999999 9 9999999999999874
No 207
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.28 E-value=3e-06 Score=87.46 Aligned_cols=36 Identities=28% Similarity=0.613 Sum_probs=30.9
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
+|+||||||||+++|..|+++ ++..+|+|||+.+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCCC
Confidence 699999999999999999998 223679999998754
No 208
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.27 E-value=6.2e-07 Score=92.38 Aligned_cols=41 Identities=29% Similarity=0.571 Sum_probs=38.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~~~g~~~ 67 (561)
+.+||+|||||++||++|+.|++. | ++|+|+|+.+.+|++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA------GFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEECCCCCCCcc
Confidence 468999999999999999999999 9 9999999999998764
No 209
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.26 E-value=5.5e-08 Score=69.96 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=40.9
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEE-ccCCCccCCcccccCCCCCeeEE
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQI-NAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
+|.+.|+. ++.|+.+||. ++.++++ + ....+ +.+.|+.||.|..+||++||++.
T Consensus 5 i~~~~C~~------C~~C~~~Cp~-~~~~~~~--~-~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 5 VDADACIG------CGVCENLCPD-VFQLGDD--G-KAKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp ECTTTCCS------CCSSTTTCTT-TBCCCSS--S-CCCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EchhhCCC------ChHHHHhCcH-HHeECCC--C-CEeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 47788987 5779999997 6655332 2 22333 38999999999999999999873
No 210
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.26 E-value=3.5e-06 Score=86.30 Aligned_cols=110 Identities=20% Similarity=0.335 Sum_probs=81.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||+|+.|+-+|..|++. |.+|+|+|+.+.+-.. .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~----------~~----------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL------GLSVTILEAGDELLVR----------VL----------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSHH----------HH-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccchh----------hc-----------------------
Confidence 36899999999999999999999 9999999988654210 00
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
+ ..+.+.+.+.+++.||++++++.|+++..+ +.+.+|.+.
T Consensus 184 ---------------~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~---------- 223 (410)
T 3ef6_A 184 ---------------G-------------RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMAS---------- 223 (410)
T ss_dssp ---------------C-------------HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEET----------
T ss_pred ---------------C-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEEC----------
Confidence 0 134556777777889999999999999753 345566663
Q ss_pred ecccccCeEEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
+|.++.+|.||.|.|..... .+.+..|++
T Consensus 224 -----dg~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (410)
T 3ef6_A 224 -----DGRSFVADSALICVGAEPAD--QLARQAGLA 252 (410)
T ss_dssp -----TSCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred -----CCCEEEcCEEEEeeCCeecH--HHHHhCCCc
Confidence 36789999999999987663 234444443
No 211
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.25 E-value=7.9e-07 Score=89.16 Aligned_cols=42 Identities=29% Similarity=0.453 Sum_probs=38.2
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC-CCCCCce
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG-SELGAHI 67 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~-~~~g~~~ 67 (561)
...+||+|||||++||++|+.|++. |++|+|||+. ..+|++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~------G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA------GHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT------SCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC------CCcEEEEeccccccCCce
Confidence 4568999999999999999999999 9999999999 8887754
No 212
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.25 E-value=5.1e-06 Score=86.93 Aligned_cols=101 Identities=14% Similarity=0.144 Sum_probs=76.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 223 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL------GSETHLVIRGETVLRK----------------------------------- 223 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEeCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999988654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..++++.++.|.+.
T Consensus 224 --------------~d-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~---------- 266 (479)
T 2hqm_A 224 --------------FD-------------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMN---------- 266 (479)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEEC----------
Confidence 00 02445566777778999999999999976544434456553
Q ss_pred ecccccC-eEEecCEEEEccCCCch
Q psy14496 182 KKNFQLG-MELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g-~~i~ad~vV~AdG~~s~ 205 (561)
+| .++.+|.||.|.|....
T Consensus 267 -----~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 267 -----DSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp -----TSCEEEEESEEEECSCEEEC
T ss_pred -----CCcEEEEcCEEEECCCCCCc
Confidence 35 58999999999996544
No 213
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.25 E-value=5.6e-07 Score=93.57 Aligned_cols=41 Identities=39% Similarity=0.708 Sum_probs=38.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+++||+|||||++||++|+.|++. |++|+|||+++.+|+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA------GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCCCCCce
Confidence 468999999999999999999999 99999999999888764
No 214
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.25 E-value=8.4e-07 Score=96.90 Aligned_cols=39 Identities=28% Similarity=0.538 Sum_probs=36.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
..+||+||||||||+++|+.|++. |++|+|||+.+..|+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR------GHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCC
Confidence 458999999999999999999999 999999999987765
No 215
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.23 E-value=5.7e-06 Score=86.15 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=75.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~------G~~Vtlv~~~~~~l~~----------------------------------- 204 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSF------GSEVTVVALEDRLLFQ----------------------------------- 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccccc-----------------------------------
Confidence 35899999999999999999999 9999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..++++ +.|.+
T Consensus 205 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~----------- 244 (463)
T 2r9z_A 205 --------------FD-------------PLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVA----------- 244 (463)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEE-----------
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEE-----------
Confidence 00 023345667777889999999999999764333 34554
Q ss_pred ecccccCe-EEecCEEEEccCCCch
Q psy14496 182 KKNFQLGM-ELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~-~i~ad~vV~AdG~~s~ 205 (561)
++|. ++.+|.||.|+|..+.
T Consensus 245 ----~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 245 ----QDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp ----TTCCEEEEESEEEECSCEEES
T ss_pred ----eCCcEEEEcCEEEECCCCCcC
Confidence 3356 7999999999997654
No 216
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=98.23 E-value=1.2e-07 Score=96.61 Aligned_cols=56 Identities=20% Similarity=0.359 Sum_probs=45.6
Q ss_pred eEEcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEE-ccCCCccCCcccccCCCCCeeE
Q psy14496 482 LILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQI-NAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 482 ~~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
..++|.+.|+. |+.|+++||.+++.... + ....+ |.+.|+.||.|..+||++||.+
T Consensus 27 ~i~~d~~kCi~------Cg~C~~~CP~~ai~~~~---~-~~~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQIDEAKCIG------CDTCSQYCPTAAIFGEM---G-EPHSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp SEEECTTTCCC------CCHHHHHCTTCCCBCCT---T-SCCBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred eEEECcccCCC------ccHHHHhcCcCceeccc---c-cceeecChhhCCchhhHHHhhCcCCccc
Confidence 44568899988 57899999999977542 2 22345 9999999999999999999988
No 217
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.23 E-value=7.7e-07 Score=94.28 Aligned_cols=41 Identities=37% Similarity=0.608 Sum_probs=38.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+.+||+|||||+|||++|+.|++. |++|+|+|+++.+|+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~------G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS------GLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCce
Confidence 458999999999999999999999 99999999999988764
No 218
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.23 E-value=1.8e-07 Score=71.86 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=43.4
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEE----------ccCCCccCCcccccCCCCCeeEECC
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQI----------NAQNCIHCKTCDIKDPTQNIEWITP 550 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~----------~~~~C~~Cg~C~~~cp~~~i~~~~p 550 (561)
.+|.+.|+. ++.|+.+|| ++++++++ + +..+. +.+.|..|+.|...||++||++.-.
T Consensus 5 ~vd~~~Cig------Cg~C~~~CP-~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~ 71 (81)
T 1iqz_A 5 IVDKETCIA------CGACGAAAP-DIYDYDED--G-IAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE 71 (81)
T ss_dssp EECTTTCCC------CSHHHHHCT-TTEEECTT--S-CEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESS
T ss_pred EEecccCcc------cChhhHhCc-hheeeCCC--C-eEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecC
Confidence 358899988 578999999 78887532 2 22222 2568999999999999999999643
No 219
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.21 E-value=5.9e-06 Score=86.05 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=76.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL------GAEVTLIEYMPEILPQ----------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999987654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.|.+.+++.||+++++++|+++..++ +. +.|.+.+ +.+|+
T Consensus 208 --------------~~-------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~---~~~g~- 254 (464)
T 2eq6_A 208 --------------GD-------------PETAALLRRALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEP---AEGGE- 254 (464)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEE---TTCCS-
T ss_pred --------------cC-------------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEee---cCCCc-
Confidence 00 1345567777778999999999999997642 22 3354421 00021
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
..++.+|.||.|+|..+..
T Consensus 255 ------~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 255 ------GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ------CEEEEESEEEECSCEEESC
T ss_pred ------eeEEEcCEEEECCCcccCC
Confidence 1279999999999987664
No 220
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.21 E-value=7.4e-06 Score=85.72 Aligned_cols=106 Identities=24% Similarity=0.284 Sum_probs=77.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 221 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL------GSKVTVVEFQPQIGAS----------------------------------- 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSSS-----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999998754210
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..++++..+.|.+.+. .+|
T Consensus 222 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g-- 269 (478)
T 1v59_A 222 --------------MD-------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTN-- 269 (478)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTT--
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCC--
Confidence 00 1355667777778999999999999997521334445555310 011
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
++.++.+|.||.|.|....
T Consensus 270 -----~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 270 -----KQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp -----EEEEEEESEEEECSCEEEC
T ss_pred -----CceEEECCEEEECCCCCcC
Confidence 2457999999999996654
No 221
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.20 E-value=1.1e-06 Score=92.29 Aligned_cols=41 Identities=34% Similarity=0.647 Sum_probs=38.2
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
..+||+|||||+|||++|+.|++. |++|+|||+.+.+|++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA------GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeccCCCCCce
Confidence 468999999999999999999999 99999999999988864
No 222
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.19 E-value=7.5e-05 Score=73.24 Aligned_cols=98 Identities=20% Similarity=0.227 Sum_probs=71.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||+|+.|+-+|..|++. |.+|+++++.+.+.. .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~------g~~v~~~~~~~~~~~--------~--------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY------STKVYLIHRRDTFKA--------Q--------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------SSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEeCCCCCc--------C---------------------------
Confidence 36899999999999999999999 999999998764311 0
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
..+.+.+.+ .||+++++++++++..+ +.+.+|.+.+. .+|+
T Consensus 193 ---------------------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~ 234 (323)
T 3f8d_A 193 ---------------------------------PIYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGE 234 (323)
T ss_dssp ---------------------------------HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC
T ss_pred ---------------------------------HHHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCc
Confidence 012233333 59999999999999754 55666766431 1122
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++.+|.||.|.|....
T Consensus 235 -------~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 235 -------IKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp -------EEEEECSEEEECCCEECC
T ss_pred -------eEEEEcCEEEEEECCCCC
Confidence 137899999999996654
No 223
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.18 E-value=4.3e-07 Score=94.40 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=34.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC--CcEEEEcCCCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE--IKICVLEKGSELGA 65 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G--~~V~ViEk~~~~g~ 65 (561)
..+||+||||||||+++|..|++. | ++|+|||+.+.+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH------HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH------CSSCEEEEECSSSSSCT
T ss_pred CCceEEEECcCHHHHHHHHHHHhc------CCCCCEEEEeCCCcCCc
Confidence 357999999999999999999999 7 99999999987754
No 224
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.18 E-value=1.1e-06 Score=92.65 Aligned_cols=41 Identities=32% Similarity=0.527 Sum_probs=37.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH------GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT------SCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEeCCCCCCce
Confidence 458999999999999999999999 99999999999998764
No 225
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.17 E-value=1.3e-06 Score=89.03 Aligned_cols=41 Identities=29% Similarity=0.558 Sum_probs=37.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
++||+|||||++||++|+.|++. +|++|+|||+++.+|++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSSGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCee
Confidence 68999999999999999999986 289999999999888764
No 226
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=98.16 E-value=1.4e-07 Score=94.26 Aligned_cols=56 Identities=14% Similarity=0.287 Sum_probs=44.8
Q ss_pred CCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeE
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
|.+.|...|. ++.|+.+||.+|++++++ ...+.+|.++|++||.|..+||.+||+.
T Consensus 203 d~~~c~~~Ce---~~~Cv~~CP~~AI~~~~~---~~~~~id~~~C~~Cg~C~~~CP~~Ai~~ 258 (366)
T 3mm5_B 203 NDEAIRKTCE---IPSTVAACPTGALKPDMK---NKTIKVDVEKCMYCGNCYTMCPGMPLFD 258 (366)
T ss_dssp CHHHHHHHCC---HHHHHHTCTTCCEEEETT---TTEEEECGGGCCCCCHHHHHCTTCCCCC
T ss_pred cchhcccccc---ccchhccCCccceEecCC---CCeEEEehhhCCCcchHHHhCCHhhccc
Confidence 5555643332 588999999999998642 1479999999999999999999999853
No 227
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.16 E-value=1.3e-05 Score=81.88 Aligned_cols=97 Identities=20% Similarity=0.312 Sum_probs=74.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA------GVHVSLVETQPRLMSRA---------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCcccccc----------------------------------
Confidence 46899999999999999999999 99999999987542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++.+++|+++. + + .|.+.
T Consensus 185 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~---------- 221 (408)
T 2gqw_A 185 --------------AP-------------ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLD---------- 221 (408)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEEC----------
Confidence 00 1344567777778999999999999987 3 2 35442
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||.|.|.....
T Consensus 222 -----~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 222 -----DGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp -----TSCEEECSEEEECSCEEECC
T ss_pred -----CCCEEEcCEEEECcCCCccH
Confidence 35689999999999977653
No 228
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.15 E-value=4e-07 Score=94.47 Aligned_cols=44 Identities=27% Similarity=0.353 Sum_probs=35.2
Q ss_pred cccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcCCCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
.+||+||||||||+++|..|++ .......|++|+|||+.+.+++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 5899999999999999999998 6110111799999999987754
No 229
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.14 E-value=1.2e-05 Score=84.04 Aligned_cols=99 Identities=23% Similarity=0.361 Sum_probs=76.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
...+|+|||||++|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~---------------------------------- 224 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVEL------GKKVRMIERNDHIGTI---------------------------------- 224 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHT------TCEEEEECCGGGTTSS----------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCchhhc----------------------------------
Confidence 346899999999999999999999 9999999987643210
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ +.+..|.+.
T Consensus 225 ---------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~--------- 265 (480)
T 3cgb_A 225 ---------------YD-------------GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETD--------- 265 (480)
T ss_dssp ---------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET---------
T ss_pred ---------------CC-------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC---------
Confidence 00 135566777778899999999999999753 445555552
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|.|....
T Consensus 266 -------~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 266 -------KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp -------TEEEECSEEEECSCEEES
T ss_pred -------CCEEEcCEEEECcCCCcC
Confidence 247999999999996544
No 230
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.13 E-value=1.4e-06 Score=87.76 Aligned_cols=40 Identities=43% Similarity=0.618 Sum_probs=37.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
++||+|||||++||++|+.|++. |++|+|+|+++.+|+..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG------TCCEEEECSSSSSSGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------CCcEEEEecCCCCCcce
Confidence 37999999999999999999999 99999999999888764
No 231
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=98.12 E-value=6.5e-07 Score=88.05 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=47.3
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
++.+.|..|. ..+|+.+||.+++...+. . ..+.+|.++|++|+.|..+||++||++..
T Consensus 146 ~~~~~C~~C~----~~~Cv~~CP~gAi~~~~~-~--g~v~id~~kCigCg~Cv~aCP~~Ai~~~~ 203 (352)
T 2ivf_B 146 YLARMCNHCT----NPACLAACPTGAIYKRED-N--GIVLVDQERCKGHRHCVEACPYKAIYFNP 203 (352)
T ss_dssp EEEECCCCCS----SCHHHHHCTTCCEEECTT-T--CCEEECTTTCCCCCHHHHHCTTCCEEEET
T ss_pred ECCCCCcCcC----CccccccCCCCceeecCC-C--CeEEechhhcCCchHHHhhcCccceeccc
Confidence 5678898843 238999999999876532 2 35889999999999999999999999864
No 232
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=1.1e-05 Score=83.67 Aligned_cols=102 Identities=17% Similarity=0.319 Sum_probs=75.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF------GTKVTILEGAGEILSG----------------------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999987654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+++ . +.|.+.+ +|
T Consensus 209 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~-----~g-- 252 (455)
T 1ebd_A 209 --------------FE-------------KQMAAIIKKRLKKKGVEVVTNALAKGAEERED-G-VTVTYEA-----NG-- 252 (455)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-E-EEEEEEE-----TT--
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-e-EEEEEEe-----CC--
Confidence 00 13445567777788999999999999976432 2 3344321 11
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
++.++.+|.||.|+|....
T Consensus 253 -----~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 253 -----ETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -----EEEEEEESEEEECSCEEES
T ss_pred -----ceeEEEcCEEEECcCCCcc
Confidence 2457999999999996644
No 233
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=2.3e-05 Score=82.41 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=76.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 214 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL------GIDSYIFARGNRILRK----------------------------------- 214 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSSSCTT-----------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc------CCeEEEEecCCccCcc-----------------------------------
Confidence 45899999999999999999999 9999999987654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..++++. +.|.+.
T Consensus 215 --------------~d-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~---------- 256 (500)
T 1onf_A 215 --------------FD-------------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLS---------- 256 (500)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEET----------
T ss_pred --------------cc-------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEEC----------
Confidence 00 0344556777778999999999999997653332 345553
Q ss_pred ecccccCeE-EecCEEEEccCCCch
Q psy14496 182 KKNFQLGME-LYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~-i~ad~vV~AdG~~s~ 205 (561)
+|.+ +.+|.||.|.|....
T Consensus 257 -----~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 257 -----DGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp -----TSCEEEEESEEEECCCBCCT
T ss_pred -----CCcEEEECCEEEECCCCCcC
Confidence 3556 999999999997655
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=1.1e-05 Score=81.27 Aligned_cols=93 Identities=23% Similarity=0.347 Sum_probs=72.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.. +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~----------------------------- 181 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA------GYHVKLIHRGAMFLG-------L----------------------------- 181 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT------TCEEEEECSSSCCTT-------C-----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCeecc-------C-----------------------------
Confidence 5899999999999999999999 999999998765311 0
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
+ ..+.+.+.+.+++.||+++++++|+++. .. +|.+
T Consensus 182 --------------~-------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~---~~---~v~~------------ 216 (367)
T 1xhc_A 182 --------------D-------------EELSNMIKDMLEETGVKFFLNSELLEAN---EE---GVLT------------ 216 (367)
T ss_dssp --------------C-------------HHHHHHHHHHHHHTTEEEECSCCEEEEC---SS---EEEE------------
T ss_pred --------------C-------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE---ee---EEEE------------
Confidence 0 0344567777778999999999999885 11 3444
Q ss_pred cccccCeEEecCEEEEccCCCchh
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
++|. +.+|.||.|.|.....
T Consensus 217 ---~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 217 ---NSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp ---TTEE-EECSCEEEECCEEECC
T ss_pred ---CCCE-EEcCEEEECcCCCcCH
Confidence 3355 9999999999977664
No 235
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.11 E-value=1.7e-06 Score=91.05 Aligned_cols=39 Identities=36% Similarity=0.615 Sum_probs=37.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
+||+|||||+|||++|+.|++. |++|+|+|+++.+|+++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA------GFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHC------CCCEEEEeCCCCCCCcc
Confidence 8999999999999999999999 99999999999998874
No 236
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.10 E-value=1.4e-05 Score=82.85 Aligned_cols=100 Identities=13% Similarity=0.210 Sum_probs=75.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-...
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 188 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ------NYNVNLIDGHERVLYKY---------------------------------- 188 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc------CCEEEEEEcCCchhhhh----------------------------------
Confidence 35799999999999999999999 99999999876531100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ ++++..|.+
T Consensus 189 --------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~----------- 229 (452)
T 2cdu_A 189 --------------FD-------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL----------- 229 (452)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-----------
T ss_pred --------------hh-------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-----------
Confidence 00 135556777778899999999999999753 454444443
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 230 -----~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 230 -----DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp -----TSCEEEESEEEECCCEEEC
T ss_pred -----CCCEEECCEEEECcCCCCC
Confidence 2458999999999996654
No 237
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.09 E-value=1e-06 Score=90.32 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=47.8
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEECC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITP 550 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~p 550 (561)
.+.+.|..|. ..+|+.+||.+++.+.+. + ..+.+|.++|++||.|..+||++||++..-
T Consensus 179 ~~~~~C~~C~----~~~Cv~aCP~gAI~~~~~-~--g~v~id~~kCigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 179 YLPRLCEHCL----NPACVATCPSGAIYKREE-D--GIVLIDQDKCRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp EEEECCCCCS----SCHHHHTCTTCCEEEETT-T--CCEEECTTTCCCCCCHHHHCTTCCEEEETT
T ss_pred ecCccCcCCC----CchhhhhCCcCcEEeecC-C--CeEEECHHHCCCchHHHhhCCccceecccC
Confidence 4668898843 237999999999887532 2 358899999999999999999999998643
No 238
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.09 E-value=2.1e-06 Score=86.99 Aligned_cols=40 Identities=20% Similarity=0.418 Sum_probs=37.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
++||+|||||++||++|+.|++. |++|+|+|+++.+|++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK------GHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEEecCCcCCcc
Confidence 47999999999999999999999 99999999999888754
No 239
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.09 E-value=1e-06 Score=84.06 Aligned_cols=57 Identities=11% Similarity=-0.027 Sum_probs=44.9
Q ss_pred cCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEECC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITP 550 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~p 550 (561)
.....|..|. .-+|+.+||. ++...+ . ..+.+|+++|++||.|..+||+++|+|...
T Consensus 63 ~~~~~C~~C~----~p~C~~~CP~-Ai~~~~--~--g~v~id~~~CigC~~C~~~CP~~Ai~~~~~ 119 (274)
T 1ti6_B 63 YRPTPCMHCE----NAPCVAKGNG-AVYQRE--D--GIVLIDPEKAKGKKELLDTCPYGVMYWNEE 119 (274)
T ss_dssp EEEECCCCCT----TCHHHHHTTT-SEEECT--T--SCEEECTTTTTTCGGGGGGCSSCCCEEETT
T ss_pred EcCCcCCCCC----ChHHHhhChH-Hhhhcc--C--CcEEechhhccchHHHHhhCccCCeEEEcc
Confidence 3456787754 3469999999 877542 2 358899999999999999999999999754
No 240
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.07 E-value=2.5e-06 Score=89.24 Aligned_cols=43 Identities=30% Similarity=0.502 Sum_probs=38.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCCCCCCcee
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGSELGAHIL 68 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~~~g~~~~ 68 (561)
++.+||+|||||++||++|+.|++. | .+|+|||+.+.+|+...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~------g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL------GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESSSSSSGGGC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEeCCCCCCCeee
Confidence 3568999999999999999999999 8 79999999998887643
No 241
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=1.1e-05 Score=83.78 Aligned_cols=99 Identities=23% Similarity=0.318 Sum_probs=72.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||++|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 209 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL------GAQVSVVEARERILPT----------------------------------- 209 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999998754210
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++.. +. +.+... +|+
T Consensus 210 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~v~~~------~G~- 251 (458)
T 1lvl_A 210 --------------YD-------------SELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LLANDG------KGG- 251 (458)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EEEECS------SSC-
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EEEEEC------CCc-
Confidence 00 03445566667778999999999999863 22 334321 121
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++.+|.||.|+|....
T Consensus 252 ------~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 252 ------QLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp ------CCEECCSCEEECCCEEEC
T ss_pred ------eEEEECCEEEECcCCCcC
Confidence 147999999999996544
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.05 E-value=2.7e-05 Score=81.31 Aligned_cols=106 Identities=10% Similarity=0.131 Sum_probs=76.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+....
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL------GADVTAVEFLGHVGGVG---------------------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSCSS----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEeccCccCCcc----------------------------------
Confidence 46899999999999999999999 99999999886542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..++++. +.|.+.+.
T Consensus 218 --------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~-------- 261 (474)
T 1zmd_A 218 --------------ID-------------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGK-IDVSIEAA-------- 261 (474)
T ss_dssp --------------CC-------------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSC-EEEEEEET--------
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCce-EEEEEEec--------
Confidence 00 1344567777778999999999999998653331 33443110
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
...++.++.+|.||.|.|....
T Consensus 262 --~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 262 --SGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp --TSCCCEEEEESEEEECSCEEEC
T ss_pred --CCCCceEEEcCEEEECcCCCcC
Confidence 0123568999999999997765
No 243
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.05 E-value=9.1e-07 Score=85.63 Aligned_cols=57 Identities=19% Similarity=0.273 Sum_probs=46.6
Q ss_pred cCCCCcccccccccccccccccCC-eeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPA-GVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~-~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
++.+.|..|. .-+|+.+||. +++...++ ..+.+|.++|++||.|..+||+++|++..
T Consensus 95 ~~~~~C~~C~----~~~C~~~CP~~gAi~~~~~----g~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 95 IRKDGCMHCE----DPGCLKACPSAGAIIQYAN----GIVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEEESCCCBS----SCHHHHHCCSTTSEEEETT----SCEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred ECcccCCCcC----ChhhhhhCCccCccccccc----cceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 4567788743 3389999999 99876432 36889999999999999999999999864
No 244
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.9e-05 Score=81.59 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=76.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 220 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL------GVPVTVVASQDHVLPY----------------------------------- 220 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCC-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999987654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ ++. +.|.+.
T Consensus 221 --------------~d-------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~-v~v~~~---------- 261 (499)
T 1xdi_A 221 --------------ED-------------ADAALVLEESFAERGVRLFKNARAASVTRT-GAG-VLVTMT---------- 261 (499)
T ss_dssp --------------SS-------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSS-EEEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCE-EEEEEC----------
Confidence 00 135556777778899999999999999865 333 344442
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+|.++.+|.||.|.|..+..
T Consensus 262 -----~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 262 -----DGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp -----TSCEEEESEEEECCCEEECC
T ss_pred -----CCcEEEcCEEEECCCCCcCC
Confidence 35689999999999987653
No 245
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.03 E-value=3.2e-05 Score=80.22 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=76.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||..|+-+|..|++. |.+|+|+++.+.+....
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM------KKTVHVFESLENLLPKY---------------------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEEccCcccccc----------------------------------
Confidence 36799999999999999999999 99999999886542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ ++.+ .|.+.
T Consensus 187 --------------~d-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~---------- 227 (452)
T 3oc4_A 187 --------------FD-------------KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETS---------- 227 (452)
T ss_dssp --------------CC-------------HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEES----------
T ss_pred --------------CC-------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEEC----------
Confidence 00 135566777777899999999999999764 4444 56553
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+| ++.+|.||.|.|....
T Consensus 228 -----~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 228 -----EQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp -----SC-EEEESEEEECSCCBCC
T ss_pred -----CC-EEEeCEEEECcCCCCC
Confidence 24 7999999999996544
No 246
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.02 E-value=4.3e-06 Score=88.01 Aligned_cols=42 Identities=38% Similarity=0.485 Sum_probs=38.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
...+||+|||||++||++|+.|++. |++|+|+|+.+.+|+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~------g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA------GHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH------TCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCce
Confidence 3468999999999999999999999 99999999999888764
No 247
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.01 E-value=4.4e-07 Score=66.52 Aligned_cols=55 Identities=18% Similarity=0.088 Sum_probs=41.4
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEc---cC--CCccCCcccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQIN---AQ--NCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~---~~--~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.+|.+.|+. ++.|+.+||. +++++++ + ....++ .+ .|..|+.|..+||++||+++
T Consensus 5 ~id~~~C~~------C~~C~~~Cp~-~~~~~~~--~-~~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 5 SVDQDTCIG------DAICASLCPD-VFEMNDE--G-KAQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp EECTTTCCC------CCHHHHHCTT-TEEECTT--S-CEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EECcccCcC------chHHHHhCCc-eEEECCC--C-ceeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 357889988 5789999995 8887532 2 233445 24 47899999999999999985
No 248
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.01 E-value=2.4e-05 Score=82.00 Aligned_cols=99 Identities=23% Similarity=0.231 Sum_probs=74.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-...
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRK------GKEVVLIDVVDTCLAGY---------------------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCeEEEEEcccchhhhH----------------------------------
Confidence 46899999999999999999999 99999999876541100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++.. ++.+..|.+
T Consensus 234 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~----------- 273 (490)
T 2bc0_A 234 --------------YD-------------RDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT----------- 273 (490)
T ss_dssp --------------SC-------------HHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-----------
T ss_pred --------------HH-------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-----------
Confidence 00 13455677777788999999999999974 344434444
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 274 -----~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 274 -----DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp -----SSCEEECSEEEECCCEEEC
T ss_pred -----CCcEEECCEEEECCCCCcC
Confidence 2458999999999995543
No 249
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.01 E-value=1.7e-06 Score=91.84 Aligned_cols=37 Identities=32% Similarity=0.586 Sum_probs=32.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
+||+||||||+||+++|..|++. |+.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-----~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-----PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-----TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-----cCCcEEEEecCCcc
Confidence 58999999999999999999882 29999999998654
No 250
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.01 E-value=2.9e-05 Score=83.05 Aligned_cols=125 Identities=22% Similarity=0.310 Sum_probs=81.9
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||||+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------------------------ 189 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL------GIKTTLLELADQVMTP------------------------------------ 189 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSCTT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCcEEEEEcCCccchh------------------------------------
Confidence 4899999999999999999999 9999999987643110
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEeccccc--ccCCc
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGI--NKEGI 180 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~--~~~g~ 180 (561)
++ ..+.+.+.+.+++.||++++++.|+++..+++..+.......... ..++.
T Consensus 190 -------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (565)
T 3ntd_A 190 -------------VD-------------REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH 243 (565)
T ss_dssp -------------SC-------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE
T ss_pred -------------cC-------------HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc
Confidence 00 134556677777899999999999999763211111000000000 01122
Q ss_pred eecccccCeEEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
..+.+++|.++.+|.||.|.|...... +.+..|++
T Consensus 244 ~~v~~~~g~~i~~D~vi~a~G~~p~~~--l~~~~g~~ 278 (565)
T 3ntd_A 244 LSLTLSNGELLETDLLIMAIGVRPETQ--LARDAGLA 278 (565)
T ss_dssp EEEEETTSCEEEESEEEECSCEEECCH--HHHHHTCC
T ss_pred EEEEEcCCCEEEcCEEEECcCCccchH--HHHhCCcc
Confidence 233445677899999999999877642 34445554
No 251
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.00 E-value=9.7e-06 Score=85.08 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 18 ~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+.+.+.+|||||||+||+++|..|++. +++|+|||+.+.
T Consensus 38 ~~~~KprVVIIGgG~AGl~~A~~L~~~------~~~VtLId~~~~ 76 (502)
T 4g6h_A 38 QHSDKPNVLILGSGWGAISFLKHIDTK------KYNVSIISPRSY 76 (502)
T ss_dssp CSCSSCEEEEECSSHHHHHHHHHSCTT------TCEEEEEESSSE
T ss_pred CCCCCCCEEEECCcHHHHHHHHHhhhC------CCcEEEECCCCC
Confidence 344567899999999999999999988 999999999764
No 252
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.00 E-value=3.9e-05 Score=79.88 Aligned_cols=97 Identities=19% Similarity=0.172 Sum_probs=75.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~------------------------------------ 213 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL------GSKVTVLARNTLFFR------------------------------------ 213 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTTT------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEEECCccCC------------------------------------
Confidence 46899999999999999999999 999999998764310
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ +..+.|.+.
T Consensus 214 --------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~v~~~---------- 254 (467)
T 1zk7_A 214 --------------ED-------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHM--DGEFVLTTT---------- 254 (467)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEE--TTEEEEEET----------
T ss_pred --------------CC-------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEEEC----------
Confidence 00 135566777778899999999999999754 233445552
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|.|.++.
T Consensus 255 ------~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 255 ------HGELRADKLLVATGRTPN 272 (467)
T ss_dssp ------TEEEEESEEEECSCEEES
T ss_pred ------CcEEEcCEEEECCCCCcC
Confidence 247999999999997665
No 253
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=98.00 E-value=1.5e-06 Score=92.61 Aligned_cols=64 Identities=20% Similarity=0.215 Sum_probs=49.8
Q ss_pred CceEEcCCCCcccc-cccccccccccccCCe-----eEEEEeecCceeEEEEccCCCccCCcccccCCCCCee-EECC
Q psy14496 480 IHLILKNKKIPIHI-NFSIYAGPEARYCPAG-----VYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIE-WITP 550 (561)
Q Consensus 480 ~h~~~~~~~~c~~~-~~~~~~~~c~~~CP~~-----~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~-~~~p 550 (561)
-.|-|.|.+.|.-. | .--|..+||.. |+++.++ .++..|+++-|++||.|..+||++||+ -+.|
T Consensus 6 ~~~~~~~~~~c~~~~~----~~~c~~~cp~~~~~~~~~~~~~~---~~~~~i~~~~c~~~~~~~~~cp~~~i~i~nl~ 76 (608)
T 3j16_B 6 SRIAIVSADKCKPKKC----RQECKRSCPVVKTGKLCIEVTPT---SKIAFISEILCIGCGICVKKCPFDAIQIINLP 76 (608)
T ss_dssp EEEEEECSSSCCHHHH----CSHHHHHCHHHHHTCCSEEEETT---TTEEEECTTTCCCCCHHHHHCSSCCEEEEEES
T ss_pred ceEEEEeccccCcccc----ccchhhcCCCccCCceEEEEcCC---CCceEEehhhccccccccccCCccceEEecCC
Confidence 45667888888532 4 35699999953 8887543 247999999999999999999999998 4445
No 254
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.00 E-value=5.2e-06 Score=85.61 Aligned_cols=58 Identities=12% Similarity=0.145 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 131 SDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 131 ~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..+.+.|.+.+++.|++|+.+++|++|..+ ++++++|.+ +|.+++||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~----------------~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS----------------EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE----------------TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE----------------CCeEEECCEEEECCCCCcc
Confidence 578888999888899999999999999875 566666664 2468999999999998864
No 255
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.00 E-value=3.8e-05 Score=80.02 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=75.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 212 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL------GAEVTVVEFAPRCAPT----------------------------------- 212 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh------CCEEEEEecCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999988654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHH-HHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKA-ENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a-~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.+.+.+ ++.||+++++++|+++..++++ +.|.+.+ .+|+
T Consensus 213 --------------~d-------------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~----~~g~ 259 (468)
T 2qae_A 213 --------------LD-------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS--VSLEVEG----KNGK 259 (468)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS--EEEEEEC----C---
T ss_pred --------------CC-------------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--EEEEEEc----CCCc
Confidence 00 13455677777 7889999999999999865332 3344421 1121
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|.|..+.
T Consensus 260 -------~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 260 -------RETVTCEALLVSVGRRPF 277 (468)
T ss_dssp -------EEEEEESEEEECSCEEEC
T ss_pred -------eEEEECCEEEECCCcccC
Confidence 157999999999997765
No 256
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.99 E-value=3.4e-05 Score=80.72 Aligned_cols=100 Identities=22% Similarity=0.331 Sum_probs=76.8
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
...+|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~---------------------------------- 229 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGL------GVKTTLLHRGDLILRN---------------------------------- 229 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT----------------------------------
T ss_pred cCCcEEEECcCHHHHHHHHHHHHc------CCeEEEEECCCccccc----------------------------------
Confidence 356899999999999999999999 9999999987653110
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.|.+.+++.|++++.+++|+++..+ ++.+ .|.+.
T Consensus 230 ---------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~--------- 270 (484)
T 3o0h_A 230 ---------------FD-------------YDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLT--------- 270 (484)
T ss_dssp ---------------SC-------------HHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEET---------
T ss_pred ---------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEEC---------
Confidence 00 134556777777889999999999999865 3333 55553
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|+|..+.
T Consensus 271 ------~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 271 ------NGQTICADRVMLATGRVPN 289 (484)
T ss_dssp ------TSCEEEESEEEECCCEEEC
T ss_pred ------CCcEEEcCEEEEeeCCCcC
Confidence 3568999999999997654
No 257
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.99 E-value=5e-05 Score=74.59 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=75.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. |.+|+++++.+.+..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI------ASEVHLIHRRDGFRA------------------------------------ 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCC------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCcccc------------------------------------
Confidence 35899999999999999999999 999999998754310
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccC-Cc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKE-GI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~-g~ 180 (561)
...+.+.|.+.+++.||+++++++|+++..+ ++++.+|.+.+. .+ |+
T Consensus 183 ----------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~~g~ 230 (320)
T 1trb_A 183 ----------------------------EKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDT---QNSDN 230 (320)
T ss_dssp ----------------------------CHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECC---TTCCC
T ss_pred ----------------------------CHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEec---cCCCc
Confidence 0023345666677789999999999999865 446666776431 01 21
Q ss_pred eecccccCeEEecCEEEEccCCCc
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+.++.+|.||.|.|...
T Consensus 231 -------~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 231 -------IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp -------CEEEECSEEEECSCEEE
T ss_pred -------eEEEEcCEEEEEeCCCC
Confidence 25799999999999554
No 258
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=97.96 E-value=3.9e-06 Score=96.12 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=48.0
Q ss_pred EEcCCCCcccccccccccccccccCCeeEEEEe--ec-------------------Cc-eeEEEEccCCCccCCcccccC
Q psy14496 483 ILKNKKIPIHINFSIYAGPEARYCPAGVYEFII--EK-------------------NK-IQHLQINAQNCIHCKTCDIKD 540 (561)
Q Consensus 483 ~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~--~~-------------------~~-~~~~~~~~~~C~~Cg~C~~~c 540 (561)
-+.|.+.|+. |+.|+++||.+++.+.. .+ .+ ...+.++.+.|++||.|..+|
T Consensus 681 p~~d~~kCi~------Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vC 754 (1231)
T 2c42_A 681 PQWVPENCIQ------CNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADIC 754 (1231)
T ss_dssp EEECTTTCCC------CCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHC
T ss_pred eEEeCccCCc------hhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhC
Confidence 3568899998 56799999999988641 10 00 125789999999999999999
Q ss_pred CC--CCeeEEC
Q psy14496 541 PT--QNIEWIT 549 (561)
Q Consensus 541 p~--~~i~~~~ 549 (561)
|+ +||++..
T Consensus 755 P~~~~AI~~~~ 765 (1231)
T 2c42_A 755 PPKEKALVMQP 765 (1231)
T ss_dssp SSSSCSEEEEE
T ss_pred CCCccCeEEec
Confidence 99 9998753
No 259
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.95 E-value=6.2e-05 Score=78.48 Aligned_cols=111 Identities=20% Similarity=0.267 Sum_probs=80.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||+|+.|+-+|..|++.. |.+|+++|+.+.+....
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~-----g~~Vtlv~~~~~~l~~~---------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMW-----GIDTTVVELADQIMPGF---------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHH-----CCEEEEECSSSSSSTTT----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhc-----CCcEEEEEccCcccccc----------------------------------
Confidence 468999999999999999998863 78999999876431100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.|.+.+++.||+++++++|+++..+ ++.+. |.+
T Consensus 200 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~-v~~----------- 239 (472)
T 3iwa_A 200 --------------TS-------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVA-RVI----------- 239 (472)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEE-EEE-----------
T ss_pred --------------cC-------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEE-EEE-----------
Confidence 00 135566777788899999999999999764 44433 444
Q ss_pred ecccccCeEEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
++|.++.+|.||.|.|..... .+.+..|++
T Consensus 240 ----~~g~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 269 (472)
T 3iwa_A 240 ----TDKRTLDADLVILAAGVSPNT--QLARDAGLE 269 (472)
T ss_dssp ----ESSCEEECSEEEECSCEEECC--HHHHHHTCC
T ss_pred ----eCCCEEEcCEEEECCCCCcCH--HHHHhCCcc
Confidence 235689999999999987653 133445554
No 260
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.95 E-value=5.5e-05 Score=79.35 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=76.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||..|+-+|..|++.. .+|.+|+|+|+.+.+-..
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~----------------------------------- 232 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLILRG----------------------------------- 232 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSCTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCccccc-----------------------------------
Confidence 468999999999999999998871 128999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
+. ..+.+.|.+.+++.||+++++++|+++..++++ .+.|.+.
T Consensus 233 --------------~d-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~---------- 274 (495)
T 2wpf_A 233 --------------FD-------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFE---------- 274 (495)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEEC----------
Confidence 00 024456677777899999999999999765333 3445553
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 275 -----~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 275 -----SGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp -----TSCEEEESEEEECSCEEEC
T ss_pred -----CCcEEEcCEEEECCCCccc
Confidence 3568999999999997654
No 261
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.93 E-value=1.6e-05 Score=83.20 Aligned_cols=104 Identities=18% Similarity=0.109 Sum_probs=75.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~~l~~----------------------------------- 223 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL------GSRLDVVEMMDGLMQG----------------------------------- 223 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc-----------------------------------
Confidence 46899999999999999999999 9999999988654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+++ .+.|.+.+. ++
T Consensus 224 --------------~~-------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~----~~-- 268 (482)
T 1ojt_A 224 --------------AD-------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGA----NA-- 268 (482)
T ss_dssp --------------SC-------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETT--EEEEEEESS----SC--
T ss_pred --------------cC-------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eEEEEEecc----CC--
Confidence 00 03445566677778999999999999976422 244554320 00
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
.|.++.+|.||.|.|.....
T Consensus 269 -----~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 269 -----PKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -----CSSCEEESCEEECCCEEECG
T ss_pred -----CceEEEcCEEEECcCCCcCC
Confidence 03468899999999977653
No 262
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=2.8e-05 Score=81.14 Aligned_cols=104 Identities=13% Similarity=0.208 Sum_probs=75.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~----------------------------------- 215 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI------GSEVTVVEFASEIVPT----------------------------------- 215 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999988654210
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+++ . +.|.+.+ ..+|+
T Consensus 216 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~---~~~g~- 262 (470)
T 1dxl_A 216 --------------MD-------------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGD-G-VKLTVEP---SAGGE- 262 (470)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHSSCCEECSEEEEEEECSSS-S-EEEEEEE---SSSCC-
T ss_pred --------------cc-------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCC-e-EEEEEEe---cCCCc-
Confidence 00 13455677777789999999999999975432 2 3344421 00121
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|.|....
T Consensus 263 ------~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 263 ------QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp ------CEEEEESEEECCCCEEEC
T ss_pred ------ceEEECCEEEECCCCCcC
Confidence 257999999999996654
No 263
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.92 E-value=5.4e-05 Score=78.75 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=76.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vt~v~~~~~~l~~----------------------------------- 208 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL------GVKTTLIYRGKEILSR----------------------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc-----------------------------------
Confidence 56899999999999999999999 9999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEE-ecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIA-TNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~-~~~~~~~~~g~ 180 (561)
++ ..+.+.|.+.+++.|++++.+++|+++..++++. +.|. +.
T Consensus 209 --------------~~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~--------- 251 (463)
T 4dna_A 209 --------------FD-------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMK--------- 251 (463)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESS---------
T ss_pred --------------cC-------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcC---------
Confidence 00 1355667777888999999999999998754443 4555 53
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|. +.+|.||.|.|....
T Consensus 252 ------~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 252 ------HGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ------SCE-EEESEEEECSCEEES
T ss_pred ------CCe-EEeCEEEEeeCcccC
Confidence 355 999999999996544
No 264
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.92 E-value=5.5e-05 Score=79.24 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=76.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++.. .+|.+|+|+|+.+.+...
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~----------------------------------- 228 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMILRG----------------------------------- 228 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcccc-----------------------------------
Confidence 468999999999999999998862 238999999988653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.|.+.+++.||+++++++|+++..++++ .+.|.+.
T Consensus 229 --------------~d-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~---------- 270 (490)
T 1fec_A 229 --------------FD-------------SELRKQLTEQLRANGINVRTHENPAKVTKNADG-TRHVVFE---------- 270 (490)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-CEEEEET----------
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-EEEEEEC----------
Confidence 00 134556777778899999999999999765333 2445553
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 271 -----~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 271 -----SGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp -----TSCEEEESEEEECSCEEES
T ss_pred -----CCcEEEcCEEEEccCCCcC
Confidence 3568999999999996654
No 265
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.91 E-value=5.2e-05 Score=79.48 Aligned_cols=104 Identities=19% Similarity=0.192 Sum_probs=74.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++..++ .|.+|+++++.+.+-.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~--~g~~V~~v~~~~~~~~~~---------------------------------- 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARA--LGTEVIQLFPEKGNMGKI---------------------------------- 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHH--HTCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhh--cCCEEEEEecCccccccc----------------------------------
Confidence 35799999999999999999873000 078999998765421100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+ ++. +.|.+.
T Consensus 224 --------------l~-------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~-~~v~l~---------- 264 (493)
T 1m6i_A 224 --------------LP-------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGK-LLIKLK---------- 264 (493)
T ss_dssp --------------SC-------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTE-EEEEET----------
T ss_pred --------------CC-------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCe-EEEEEC----------
Confidence 11 135556777777889999999999999754 332 355553
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+|.++.+|.||.|.|....
T Consensus 265 -----dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 265 -----DGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp -----TSCEEEESEEEECCCEEEC
T ss_pred -----CCCEEECCEEEECCCCCcc
Confidence 3568999999999997654
No 266
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.91 E-value=6.2e-05 Score=78.31 Aligned_cols=102 Identities=20% Similarity=0.301 Sum_probs=74.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 209 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY------GVDVTIVEFLPRALPN----------------------------------- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc------CCeEEEEEcCCccccc-----------------------------------
Confidence 46899999999999999999999 9999999988654110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+++ . +.|.+.+ +|+
T Consensus 210 --------------~~-------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~-----~g~- 254 (464)
T 2a8x_A 210 --------------ED-------------ADVSKEIEKQFKKLGVTILTATKVESIADGGS-Q-VTVTVTK-----DGV- 254 (464)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSS-C-EEEEEES-----SSC-
T ss_pred --------------cC-------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCC-e-EEEEEEc-----CCc-
Confidence 00 02445566677778999999999999976532 2 3344421 121
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.++.+|.||.|.|....
T Consensus 255 ------~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 255 ------AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp ------EEEEEESEEEECSCEEEC
T ss_pred ------eEEEEcCEEEECCCCCcc
Confidence 157999999999996654
No 267
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=97.90 E-value=1e-06 Score=88.57 Aligned_cols=54 Identities=20% Similarity=0.430 Sum_probs=41.8
Q ss_pred CCCCccccccccc--ccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCe
Q psy14496 486 NKKIPIHINFSIY--AGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI 545 (561)
Q Consensus 486 ~~~~c~~~~~~~~--~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i 545 (561)
|.+.|..+| ..+ ++.|+..||.+|++++. .++.+|.++|++||.|..+||..++
T Consensus 246 D~e~~~~~~-~gc~i~~~cv~~CPt~Ai~~~~-----~~~~id~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 246 DQEAVKEYA-SWMDIENEVVKLCPTGAIKWDG-----KELTIDNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp CHHHHHHHH-TTSCHHHHTGGGCTTCCEEECS-----SCEEECTTTCCCCCHHHHHCTTTEE
T ss_pred cHHHHhhhc-cccccCccccccCCccccccCC-----ceeEEChhhcCccChhHHhCcHhhc
Confidence 445555443 111 47799999999999853 3799999999999999999999654
No 268
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.88 E-value=8e-05 Score=78.06 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=76.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+...
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 236 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL------GAKVTVVEFLDTILGG----------------------------------- 236 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSSS-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecccccccc-----------------------------------
Confidence 46899999999999999999999 9999999987654210
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++.+++|+++..++++ +.|.+.+. .+|+
T Consensus 237 --------------~d-------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~---~~g~- 283 (491)
T 3urh_A 237 --------------MD-------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPV---KGGE- 283 (491)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEET---TSCC-
T ss_pred --------------CC-------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE--EEEEEEec---CCCc-
Confidence 00 134556777777889999999999999865332 33444320 1121
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++.+|.||.|.|....
T Consensus 284 ------~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 284 ------ATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp ------CEEEEESEEEECCCCEEC
T ss_pred ------eEEEEcCEEEEeeCCccC
Confidence 257999999999997654
No 269
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.87 E-value=9.3e-05 Score=77.55 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=74.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
..-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+....
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~--------------------------------- 213 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRL------GVIVKVFGRSGSVANLQ--------------------------------- 213 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHT------TCEEEEECCTTCCTTCC---------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCcccccC---------------------------------
Confidence 356899999999999999999999 99999999987642100
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
. ..+.+.+.+.+++. ++++++++|+++..+++ .+ .|.+.+ .+|+
T Consensus 214 ----------------d-------------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v-~v~~~~----~~G~ 257 (492)
T 3ic9_A 214 ----------------D-------------EEMKRYAEKTFNEE-FYFDAKARVISTIEKED-AV-EVIYFD----KSGQ 257 (492)
T ss_dssp ----------------C-------------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SE-EEEEEC----TTCC
T ss_pred ----------------C-------------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EE-EEEEEe----CCCc
Confidence 0 03445566666666 99999999999987533 33 244421 1221
Q ss_pred eecccccCeEEecCEEEEccCCCch
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
. .++.+|.||.|.|....
T Consensus 258 ~-------~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 258 K-------TTESFQYVLAATGRKAN 275 (492)
T ss_dssp E-------EEEEESEEEECSCCEES
T ss_pred e-------EEEECCEEEEeeCCccC
Confidence 1 57999999999997654
No 270
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.87 E-value=7.4e-05 Score=80.25 Aligned_cols=107 Identities=12% Similarity=0.229 Sum_probs=79.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+|+++.+.+...
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 225 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER------GIEVTLVEMANQVMPP----------------------------------- 225 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccccc-----------------------------------
Confidence 35799999999999999999999 9999999987653210
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.|++++++++|+++..+ ++ +|.+
T Consensus 226 --------------~~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~----------- 263 (588)
T 3ics_A 226 --------------ID-------------YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRL----------- 263 (588)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEE-----------
T ss_pred --------------CC-------------HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEE-----------
Confidence 00 134556777777899999999999999643 22 2444
Q ss_pred ecccccCeEEecCEEEEccCCCchhhHHHHHHcCCC
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLD 217 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~~~~l~~~~g~~ 217 (561)
++|.++.+|.||.|.|..... .+.+..|++
T Consensus 264 ----~~g~~i~~D~Vi~a~G~~p~~--~~l~~~g~~ 293 (588)
T 3ics_A 264 ----KSGSVIQTDMLILAIGVQPES--SLAKGAGLA 293 (588)
T ss_dssp ----TTSCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred ----CCCCEEEcCEEEEccCCCCCh--HHHHhcCce
Confidence 335689999999999987664 234456654
No 271
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.86 E-value=7.2e-05 Score=74.00 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=73.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||+|..|+-+|..|++. |.+|+++++.+.+...
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~v~~~~~~~~~----------------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT------ARRITLIHRRPQFRAH----------------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEcCCccCcc-----------------------------------
Confidence 46899999999999999999999 9999999987643110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
..+.+.|.+.+++.||++++++.+.++.. ++.+.+|.+... .+|+
T Consensus 191 -----------------------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~---~~g~- 235 (335)
T 2zbw_A 191 -----------------------------EASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHN---QTQE- 235 (335)
T ss_dssp -----------------------------HHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEET---TTCC-
T ss_pred -----------------------------HHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEEC---CCCc-
Confidence 01223455666678999999999999976 345556665310 0221
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++.+|.||.|.|....
T Consensus 236 ------~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 236 ------ELALEVDAVLILAGYITK 253 (335)
T ss_dssp ------EEEEECSEEEECCCEEEE
T ss_pred ------eEEEecCEEEEeecCCCC
Confidence 157999999999996543
No 272
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.84 E-value=0.00012 Score=76.50 Aligned_cols=108 Identities=18% Similarity=0.120 Sum_probs=77.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
..-.|+|||||+.|+-+|..|++. |.+|+|+++.+.+-..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~---------------------------------- 225 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSAL------GSKTSLMIRHDKVLRS---------------------------------- 225 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT----------------------------------
T ss_pred cCccEEEECCCHHHHHHHHHHHHc------CCeEEEEEeCCccccc----------------------------------
Confidence 346899999999999999999999 9999999987653110
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
++ ..+.+.+.+.+++.||+++++++|+++..++++..+.|.+.+.+ +|+
T Consensus 226 ---------------~d-------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~---~g~ 274 (478)
T 3dk9_A 226 ---------------FD-------------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG---RLP 274 (478)
T ss_dssp ---------------SC-------------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTT---SCC
T ss_pred ---------------cC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCC---CCc
Confidence 00 02445567777789999999999999987545523456554311 111
Q ss_pred eecccccCeEEecCEEEEccCCCc
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.+|.++.+|.||.|.|...
T Consensus 275 -----~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 275 -----VMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp -----EEEEEEEESEEEECSCEEE
T ss_pred -----ccceEEEcCEEEEeecccc
Confidence 0135799999999999543
No 273
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.84 E-value=7.1e-05 Score=74.95 Aligned_cols=101 Identities=20% Similarity=0.281 Sum_probs=73.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~~----------------------------------- 201 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN------AASVTLVHRGHEFQGH----------------------------------- 201 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCCCCCC-----------------------------------
Confidence 35899999999999999999999 9999999987643110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
+ .+.+.|.+..++.|++++++++|+++..+ ++++.+|.+.. .+|+
T Consensus 202 ----------~-------------------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~----~~g~- 246 (360)
T 3ab1_A 202 ----------G-------------------KTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRS----SDGS- 246 (360)
T ss_dssp ----------S-------------------HHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEE----TTCC-
T ss_pred ----------H-------------------HHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEe----cCCC-
Confidence 0 12223445556789999999999999764 45555666531 1221
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 247 ------~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 247 ------KWTVEADRLLILIGFKS 263 (360)
T ss_dssp ------EEEEECSEEEECCCBCC
T ss_pred ------eEEEeCCEEEECCCCCC
Confidence 15789999999999553
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.83 E-value=1.5e-05 Score=78.95 Aligned_cols=37 Identities=27% Similarity=0.322 Sum_probs=33.9
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGA 65 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~ 65 (561)
+||+|||||+||+.+|+.|++. |++|+|+|+++..+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~------G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL------GVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHC------CCcEEEEeccCCcCC
Confidence 6999999999999999999999 999999999875443
No 275
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.83 E-value=0.00011 Score=76.70 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=74.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+|+++.+.+...
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 218 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL------GAEVTVLEAMDKFLPA----------------------------------- 218 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCcCcc-----------------------------------
Confidence 46899999999999999999999 9999999987653110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.+++.||+++++++|+++..+++ . +.|.+.+. +|
T Consensus 219 --------------~~-------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~-~-~~v~~~~~----~g-- 263 (476)
T 3lad_A 219 --------------VD-------------EQVAKEAQKILTKQGLKILLGARVTGTEVKNK-Q-VTVKFVDA----EG-- 263 (476)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSS-C-EEEEEESS----SE--
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC-E-EEEEEEeC----CC--
Confidence 00 13455667777788999999999999986533 3 23444220 11
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 264 ------~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 264 ------EKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp ------EEEEEESEEEECSCEEE
T ss_pred ------cEEEECCEEEEeeCCcc
Confidence 04789999999999553
No 276
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.81 E-value=1.3e-05 Score=83.59 Aligned_cols=41 Identities=39% Similarity=0.634 Sum_probs=36.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~~g~~~ 67 (561)
..+||+|||||++||++|+.|++. |+ +|+|+|+.+.+|+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~------g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA------GITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT------TCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc------CCCceEEEeCCCCCCCce
Confidence 458999999999999999999999 99 899999998888753
No 277
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.81 E-value=0.00017 Score=70.34 Aligned_cols=96 Identities=24% Similarity=0.297 Sum_probs=70.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||+|+.|+-+|..|++. +.+|+++++.+.+..
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------- 181 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------- 181 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------BSEEEEECSSSSCCS-------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHh------CCEEEEEEeCcccCc-------------------------------------
Confidence 5799999999999999999999 999999998764310
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
. +.+.+.+.+ .|++++++++++++..+ ++++.+|.+.+. .+|+
T Consensus 182 ---------~----------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~- 225 (310)
T 1fl2_A 182 ---------D----------------------QVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGD- 225 (310)
T ss_dssp ---------C----------------------HHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEET---TTCC-
T ss_pred ---------c----------------------HHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEEC---CCCc-
Confidence 0 113334445 69999999999999764 456667776431 1222
Q ss_pred ecccccCeEEecCEEEEccCCC
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
..++.+|.||.|.|..
T Consensus 226 ------~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 226 ------IHNIELAGIFVQIGLL 241 (310)
T ss_dssp ------EEEEECSEEEECSCEE
T ss_pred ------EEEEEcCEEEEeeCCc
Confidence 1478999999999954
No 278
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.78 E-value=0.00013 Score=77.03 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=76.1
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhh
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEER 99 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 99 (561)
...-.++|||||+.|+=+|..+++. |.+|+|+++...+..
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~L~~---------------------------------- 260 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIVLRG---------------------------------- 260 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCSSTT----------------------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHhc------CCeEEEecccccccc----------------------------------
Confidence 3456899999999999999999999 999999987433210
Q ss_pred hhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCC
Q psy14496 100 FLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEG 179 (561)
Q Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g 179 (561)
.+ .++.+.+.+.+++.|++++.+..+.++...++ .+.|.+.
T Consensus 261 -----------~D------------------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~--~~~v~~~-------- 301 (542)
T 4b1b_A 261 -----------FD------------------QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD--KILVEFS-------- 301 (542)
T ss_dssp -----------SC------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT--EEEEEET--------
T ss_pred -----------cc------------------hhHHHHHHHHHHhhcceeecceEEEEEEecCC--eEEEEEc--------
Confidence 00 13556677777889999999999999987533 2335443
Q ss_pred ceecccccCeEEecCEEEEccCCCchh
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
++.++.+|.|+.|.|+...+
T Consensus 302 -------~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 302 -------DKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp -------TSCEEEESEEEECSCEEESC
T ss_pred -------CCCeEEEEEEEEcccccCCc
Confidence 34678899999999977654
No 279
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.77 E-value=2e-05 Score=85.65 Aligned_cols=41 Identities=34% Similarity=0.565 Sum_probs=37.7
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
...+||+||||||+||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT------TCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEecCCCCCCc
Confidence 4568999999999999999999999 9999999999888764
No 280
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.76 E-value=0.00013 Score=76.17 Aligned_cols=103 Identities=20% Similarity=0.244 Sum_probs=74.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+++......
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~l~~------------------------------------ 224 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGL------GYEPTVMVRSIVLRG------------------------------------ 224 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCSSTT------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCcc------------------------------------
Confidence 35799999999999999999999 999999987422100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ .++.+.+.+.+++.||+++++++|+++..++++.+ .|.+.+. .+|+
T Consensus 225 --------------~d-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~~- 272 (483)
T 3dgh_A 225 --------------FD-------------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNV---ETGE- 272 (483)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEET---TTCC-
T ss_pred --------------cC-------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecC---CCCc-
Confidence 00 13455677777789999999999999987544443 3555321 1111
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 273 ------~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 273 ------ESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp ------EEEEEESEEEECSCEEE
T ss_pred ------eeEEEcCEEEECccccc
Confidence 13789999999999654
No 281
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.75 E-value=0.00018 Score=71.04 Aligned_cols=98 Identities=24% Similarity=0.255 Sum_probs=72.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. |.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~------g~~v~~v~~~~~~~~------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY------GSKVFMLVRKDHLRA------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccCC------------------------------------
Confidence 46799999999999999999999 999999998764311
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHC-CCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENM-GIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
.+.+.+.+.+. ||++++++.++++..+ ++.+.+|.+.+. .+|+
T Consensus 211 --------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---~~g~ 254 (338)
T 3itj_A 211 --------------------------------STIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNT---KKNE 254 (338)
T ss_dssp --------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTTE
T ss_pred --------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEEC---CCCc
Confidence 01234444454 9999999999999875 455666776431 1121
Q ss_pred eecccccCeEEecCEEEEccCCCc
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+.++.+|.||.|.|...
T Consensus 255 -------~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 255 -------ETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp -------EEEEECSEEEECSCEEE
T ss_pred -------eEEEEeCEEEEEeCCCC
Confidence 35799999999999543
No 282
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.75 E-value=0.00017 Score=70.85 Aligned_cols=97 Identities=19% Similarity=0.208 Sum_probs=70.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
..|+|||+|+.|+-+|..|++. |.+|+++++.+....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~------g~~V~~i~~~~~~~~------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY------VKNVTIIEYMPKYMC------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT------BSEEEEECSSSSCCS-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhh------CCcEEEEEcCCccCC-------------------------------------
Confidence 5799999999999999999999 999999998654310
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
. ..+.+.+.+.|++++++++++++..+ ++++.+|.+.+. .+|+
T Consensus 193 ---------~----------------------~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~-- 235 (319)
T 3cty_A 193 ---------E----------------------NAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDR---TTGE-- 235 (319)
T ss_dssp ---------C----------------------HHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEET---TTCC--
T ss_pred ---------C----------------------HHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEc---CCCc--
Confidence 0 11334444689999999999999764 455666766320 1221
Q ss_pred cccccCeEEecCEEEEccCCCc
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 236 -----~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 236 -----EKLIETDGVFIYVGLIP 252 (319)
T ss_dssp -----EEEECCSEEEECCCEEE
T ss_pred -----eEEEecCEEEEeeCCcc
Confidence 13689999999999544
No 283
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.74 E-value=2.6e-05 Score=86.41 Aligned_cols=41 Identities=34% Similarity=0.565 Sum_probs=37.8
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
....+|+||||||+||++|+.|++. |++|+|||+...+|+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~------g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEecCcCCCc
Confidence 3468999999999999999999999 9999999999988875
No 284
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.74 E-value=2.5e-05 Score=85.98 Aligned_cols=41 Identities=32% Similarity=0.506 Sum_probs=37.3
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCc
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~ 66 (561)
...+||+|||||||||++|+.|++. |++|+|||+.+.+|+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~------G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES------GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCe
Confidence 3468999999999999999999999 9999999999887664
No 285
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.73 E-value=0.00015 Score=74.92 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=72.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||||+.|+-+|..|++. |.+|+|+++.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ------GKNVTMIVRGERVLRRS----------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----------------------------------
Confidence 4899999999999999999999 99999999877542100
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
++ ..+.+.+.+.+++. ++++.++.|.++..+ +.+..+.+
T Consensus 188 -------------~~-------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v~~------------ 226 (449)
T 3kd9_A 188 -------------FD-------------KEVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKVVT------------ 226 (449)
T ss_dssp -------------SC-------------HHHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEEEE------------
T ss_pred -------------cC-------------HHHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEEEe------------
Confidence 00 13455566666667 999999999998643 23333333
Q ss_pred cccccCeEEecCEEEEccCCCch
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
++.++.+|.||.|.|....
T Consensus 227 ----~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 227 ----DAGEYKAELVILATGIKPN 245 (449)
T ss_dssp ----TTEEEECSEEEECSCEEEC
T ss_pred ----CCCEEECCEEEEeeCCccC
Confidence 2468999999999997755
No 286
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.70 E-value=3.1e-06 Score=89.95 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=46.1
Q ss_pred EcCCCCcccccccccccccccccCC----eeEEEEeecCce-----eEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPA----GVYEFIIEKNKI-----QHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~----~~~~~~~~~~~~-----~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.+|.+.|+. |+.|+++||. +++.+.+..... ....+|.+.|+.||.|..+||++||++.
T Consensus 141 ~~d~~kCi~------Cg~Cv~~CP~~~~~~ai~~~~~g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 141 TVDRTKCLL------CGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp EEEGGGCCC------CCHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred eeCcccCcC------CCCccchhCchhcCCceeeccCCccceecccccceechhhCCcchhHHHhhccCCcccc
Confidence 457889988 5789999998 898876531100 0245789999999999999999999875
No 287
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.70 E-value=0.0001 Score=76.01 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=69.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+... +
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~ll~~------------------~----------------- 186 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER------GLHPTLIHRSDKINKL------------------M----------------- 186 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSSCCSTT------------------S-----------------
T ss_pred cEEEEECCccchhhhHHHHHhc------CCcceeeeeecccccc------------------c-----------------
Confidence 4799999999999999999999 9999999987654210 0
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCcee
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~ 182 (561)
+ . ++.+.+.+.+++.||+++.+++|+++.. . .|.+
T Consensus 187 ---------d-----~-------------~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~------------ 221 (437)
T 4eqs_A 187 ---------D-----A-------------DMNQPILDELDKREIPYRLNEEINAING---N---EITF------------ 221 (437)
T ss_dssp ---------C-----G-------------GGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEE------------
T ss_pred ---------c-----c-------------hhHHHHHHHhhccceEEEeccEEEEecC---C---eeee------------
Confidence 0 0 1224466667778999999999988742 2 2333
Q ss_pred cccccCeEEecCEEEEccCCCc
Q psy14496 183 KNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 183 ~~f~~g~~i~ad~vV~AdG~~s 204 (561)
++|.++.+|.||.|.|...
T Consensus 222 ---~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 222 ---KSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp ---TTSCEEECSEEEECCCEEE
T ss_pred ---cCCeEEeeeeEEEEeceec
Confidence 3467899999999999543
No 288
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.69 E-value=0.00035 Score=73.03 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=73.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+++......
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~l~~------------------------------------ 222 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGI------GLDTTVMMRSIPLRG------------------------------------ 222 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEcCccccc------------------------------------
Confidence 45799999999999999999999 999999997532100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ .++.+.+.+.+++.||++++++.++++...+++. +.|.+.+. .+|+.
T Consensus 223 --------------~d-------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~---~~g~~ 271 (488)
T 3dgz_A 223 --------------FD-------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDH---ASGKE 271 (488)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSC-EEEEEEET---TTTEE
T ss_pred --------------CC-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeC---CCCee
Confidence 00 1345567777778999999999999997643443 33444220 11211
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
.++.+|.||.|.|....
T Consensus 272 -------~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 272 -------DTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp -------EEEEESEEEECSCEEES
T ss_pred -------EEEECCEEEEcccCCcc
Confidence 25789999999996543
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.67 E-value=0.00063 Score=66.43 Aligned_cols=35 Identities=23% Similarity=0.494 Sum_probs=32.1
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
-+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF------ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEeccccc
Confidence 4799999999999999999999 9999999987654
No 290
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.67 E-value=1e-05 Score=92.31 Aligned_cols=40 Identities=28% Similarity=0.479 Sum_probs=36.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCCCCCc
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSELGAH 66 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~~g~~ 66 (561)
..+||+|||||||||++|+.|++. |+ +|+|||+.+.+|+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~------G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL------GYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSCSTH
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCcEEEEeCCCCCCcc
Confidence 368999999999999999999999 99 79999998877764
No 291
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=97.67 E-value=1.6e-05 Score=75.82 Aligned_cols=53 Identities=23% Similarity=0.337 Sum_probs=44.0
Q ss_pred EEcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccC----------C---cccccCCCCCeeEE
Q psy14496 483 ILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHC----------K---TCDIKDPTQNIEWI 548 (561)
Q Consensus 483 ~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~C----------g---~C~~~cp~~~i~~~ 548 (561)
.++|.+.|+. |+.|+.+||.+++++.+.. .+.++|..| | .|..+||++||+|.
T Consensus 92 v~id~~~Cig------C~~C~~~CP~~Ai~~~~~~-------~~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~ 157 (274)
T 1ti6_B 92 VLIDPEKAKG------KKELLDTCPYGVMYWNEEE-------NVAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFL 157 (274)
T ss_dssp EEECTTTTTT------CGGGGGGCSSCCCEEETTT-------TEEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEE
T ss_pred EEechhhccc------hHHHHhhCccCCeEEEccc-------CccccCCCchhhhhhhccCCCCcchhhhCCcCceEEc
Confidence 4568899988 5679999999999886431 146799999 9 99999999999984
No 292
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=3.7e-05 Score=82.79 Aligned_cols=35 Identities=34% Similarity=0.631 Sum_probs=32.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
...+||+|||||||||++|+.|++. |++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~------g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY------GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC------CCeEEEEecc
Confidence 4569999999999999999999999 9999999984
No 293
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.59 E-value=0.00022 Score=71.54 Aligned_cols=105 Identities=18% Similarity=0.272 Sum_probs=68.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
..|+|||+|+.|+-+|..|++. |.+|+++++.+...... +.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~~~~~-----------------~d---------------- 207 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN------GSDIALYTSTTGLNDPD-----------------AD---------------- 207 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECC-------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhc------CCeEEEEecCCCCCCCC-----------------CC----------------
Confidence 4899999999999999999999 99999999876532100 00
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCC-CEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMG-IDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~g-v~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
+...++ ..+.+.+.+.+++.| ++++.+++|.++..+++ .+.|.+.
T Consensus 208 ---------~~~~~~-------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~--~~~v~~~---------- 253 (369)
T 3d1c_A 208 ---------PSVRLS-------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNG--QYHISFD---------- 253 (369)
T ss_dssp ---------CTTSCC-------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETT--EEEEEES----------
T ss_pred ---------CCccCC-------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCC--ceEEEec----------
Confidence 000011 134455666666776 99999999999865322 2344442
Q ss_pred ecccccCeEEe-cCEEEEccCCCch
Q psy14496 182 KKNFQLGMELY-AKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~-ad~vV~AdG~~s~ 205 (561)
+|.++. +|.||.|+|....
T Consensus 254 -----~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 254 -----SGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp -----SSCCEEESSCCEECCCBCGG
T ss_pred -----CCeEeccCCceEEeeccCCc
Confidence 344554 6999999997654
No 294
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.58 E-value=0.00029 Score=68.78 Aligned_cols=97 Identities=26% Similarity=0.373 Sum_probs=70.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. +.+|+++++.+.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~------g~~v~~~~~~~~~~~------------------------------------ 184 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI------CSKIYLIHRRDEFRA------------------------------------ 184 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT------SSEEEEECSSSSCBS------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCCCCCC------------------------------------
Confidence 36899999999999999999999 999999998764310
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
. . .+ +.+..++.||++++++++.++..+ ++++.+|.+.. .+|+.
T Consensus 185 ----------~-----------------~-~~---~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~----~~g~~ 228 (315)
T 3r9u_A 185 ----------A-----------------P-ST---VEKVKKNEKIELITSASVDEVYGD-KMGVAGVKVKL----KDGSI 228 (315)
T ss_dssp ----------C-----------------H-HH---HHHHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEEC----TTSCE
T ss_pred ----------C-----------------H-HH---HHHHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEc----CCCCe
Confidence 0 0 11 112224579999999999999765 45566666631 12221
Q ss_pred ecccccCeEEecCEEEEccCCC
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
.++.+|.||.|.|..
T Consensus 229 -------~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 229 -------RDLNVPGIFTFVGLN 243 (315)
T ss_dssp -------EEECCSCEEECSCEE
T ss_pred -------EEeecCeEEEEEcCC
Confidence 378999999999954
No 295
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.58 E-value=0.00048 Score=67.15 Aligned_cols=98 Identities=19% Similarity=0.254 Sum_probs=69.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. |.+|+++++.+.+.. +
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI------CKKVYLIHRRDGFRC--------A--------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT------SSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeeCCccCC--------C---------------------------
Confidence 46899999999999999999999 999999998754310 0
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHH-HCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE-NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~-~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
..+.+.+. +.||++++++.++++..+ ++.+.+|.+.+. .+|+
T Consensus 182 ---------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~ 224 (311)
T 2q0l_A 182 ---------------------------------PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNT---ATNE 224 (311)
T ss_dssp ---------------------------------HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEET---TTCC
T ss_pred ---------------------------------HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEec---CCCc
Confidence 01223333 369999999999999764 344445655310 1221
Q ss_pred eecccccCeEEecCEEEEccCCCc
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 225 -------~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 225 -------KRELVVPGFFIFVGYDV 241 (311)
T ss_dssp -------EEEEECSEEEECSCEEE
T ss_pred -------eEEEecCEEEEEecCcc
Confidence 13789999999999543
No 296
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.57 E-value=7.9e-06 Score=75.14 Aligned_cols=57 Identities=7% Similarity=-0.145 Sum_probs=45.1
Q ss_pred CCCCcccccccccccccccccC---CeeEEEEeecCceeEEEEccCCCc--cCCcccccCCCCCeeEEC
Q psy14496 486 NKKIPIHINFSIYAGPEARYCP---AGVYEFIIEKNKIQHLQINAQNCI--HCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP---~~~~~~~~~~~~~~~~~~~~~~C~--~Cg~C~~~cp~~~i~~~~ 549 (561)
....|..|. .-+|+.+|| .+++...+. . ..+.+|.+.|+ +|+.|..+||++||++..
T Consensus 68 ~~~~C~~C~----~p~C~~~CP~~~~gAi~~~~~-~--g~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~ 129 (214)
T 1h0h_B 68 FPDQCRHCI----APPCKATADMEDESAIIHDDA-T--GCVLFTPKTKDLEDYESVISACPYDVPRKVA 129 (214)
T ss_dssp EEECCCCCS----SCHHHHHHTTTCTTSEEECTT-T--CCEEECGGGGGCSCHHHHHHHCTTCCCEECT
T ss_pred cCCcCcCcC----CchhhccCCccccccEEecCC-C--CeEEEeHHHCccccccHHHHhcCCCCeEecC
Confidence 456787743 236999999 999876431 2 35889999999 999999999999999854
No 297
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.55 E-value=5.4e-05 Score=80.51 Aligned_cols=37 Identities=46% Similarity=0.747 Sum_probs=34.0
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|||+|||||++|+++|..|++. |++|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~------g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA------GKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCCC
Confidence 3569999999999999999999999 999999999864
No 298
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.54 E-value=0.00072 Score=71.21 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=70.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||||+.|+-+|..|++. |.+|+|+++......
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~l~~------------------------------------ 247 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGI------GLDVTVMVRSILLRG------------------------------------ 247 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc------CCeEEEEeccccccc------------------------------------
Confidence 35699999999999999999999 999999997421100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCC--CEEEEEecccccccCC
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKN--NVCGIATNNFGINKEG 179 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g--~v~~V~~~~~~~~~~g 179 (561)
++ .++.+.+.+.+++.||++++++.++++...+++ ..+.|.... .+|
T Consensus 248 --------------~d-------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~----~~g 296 (519)
T 3qfa_A 248 --------------FD-------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS----TNS 296 (519)
T ss_dssp --------------SC-------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEE----SSS
T ss_pred --------------CC-------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEE----CCC
Confidence 00 134556677777899999999988888653221 222333211 111
Q ss_pred ceecccccCeEEecCEEEEccCCCc
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.. -.++.+|.||.|.|...
T Consensus 297 ~~------~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 297 EE------IIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp SC------EEEEEESEEEECSCEEE
T ss_pred cE------EEEEECCEEEEecCCcc
Confidence 10 02578999999999653
No 299
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.53 E-value=0.00045 Score=72.38 Aligned_cols=107 Identities=20% Similarity=0.334 Sum_probs=70.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccC--------CCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccc
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKK--------NKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTP 94 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~--------~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~ 94 (561)
..|+|||||+.|+-+|-.|+....+. ....+|+|+|..+.+-..
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~---------------------------- 269 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM---------------------------- 269 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT----------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC----------------------------
Confidence 46999999999999998887641100 013679999987754110
Q ss_pred cchhhhhhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccc
Q psy14496 95 VIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFG 174 (561)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~ 174 (561)
++ ..+.+.+.+.+++.||+++.+++|+++. +++.+..+...
T Consensus 270 ---------------------~~-------------~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~--- 310 (502)
T 4g6h_A 270 ---------------------FE-------------KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHE--- 310 (502)
T ss_dssp ---------------------SC-------------HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECT---
T ss_pred ---------------------CC-------------HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEec---
Confidence 01 1355667777788999999999999984 23333333332
Q ss_pred cccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 175 INKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 175 ~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+|+. .+.++.+|+||.|.|...
T Consensus 311 ---dg~~-----~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 311 ---DGKI-----TEETIPYGTLIWATGNKA 332 (502)
T ss_dssp ---TSCE-----EEEEEECSEEEECCCEEC
T ss_pred ---Cccc-----ceeeeccCEEEEccCCcC
Confidence 2221 124799999999999653
No 300
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.50 E-value=0.0006 Score=71.87 Aligned_cols=97 Identities=24% Similarity=0.302 Sum_probs=71.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
..+|+|||||+.|+-+|..|++. |.+|+++++.+.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~------g~~Vtlv~~~~~l~~------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCcccCc------------------------------------
Confidence 35899999999999999999999 999999998754310
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCc
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGI 180 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~ 180 (561)
. +.+.+.+.+ .||++++++.++++..+ ++++.+|.+.+. .+|+
T Consensus 393 -----------------------~---------~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~ 436 (521)
T 1hyu_A 393 -----------------------D---------QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGD 436 (521)
T ss_dssp -----------------------C---------HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEET---TTCC
T ss_pred -----------------------C---------HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeC---CCCc
Confidence 0 113334444 59999999999999764 556767776431 1222
Q ss_pred eecccccCeEEecCEEEEccCCC
Q psy14496 181 IKKNFQLGMELYAKYTLFAEGSR 203 (561)
Q Consensus 181 ~~~~f~~g~~i~ad~vV~AdG~~ 203 (561)
..++.+|.||.|.|..
T Consensus 437 -------~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 437 -------IHSVALAGIFVQIGLL 452 (521)
T ss_dssp -------EEEEECSEEEECCCEE
T ss_pred -------eEEEEcCEEEECcCCC
Confidence 1368999999999954
No 301
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.50 E-value=5e-05 Score=80.36 Aligned_cols=37 Identities=35% Similarity=0.627 Sum_probs=32.6
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+||+||||||+||+.+|..|++. ++++|+|||+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-----~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-----PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-----CCCeEEEEcCCCC
Confidence 479999999999999999999973 2899999999864
No 302
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.50 E-value=0.00055 Score=67.48 Aligned_cols=99 Identities=22% Similarity=0.305 Sum_probs=70.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
.-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDAFRA------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhc------CCeEEEEecCCcCCc------------------------------------
Confidence 46899999999999999999999 999999998764310
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHH-HHHCCCEEEcCceEeEEEEcCCC-CEEEEEecccccccCC
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKK-AENMGIDIFSGFSASEILYDSKN-NVCGIATNNFGINKEG 179 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~-a~~~gv~i~~g~~v~~i~~~~~g-~v~~V~~~~~~~~~~g 179 (561)
. +.+.+. .++.||+++++++++++..++++ ++.+|.+.+. .+|
T Consensus 197 ----------~----------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---~~g 241 (333)
T 1vdc_A 197 ----------S----------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---VTG 241 (333)
T ss_dssp ----------C----------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---TTC
T ss_pred ----------c----------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---CCC
Confidence 0 012222 23579999999999999765321 5555665321 122
Q ss_pred ceecccccCeEEecCEEEEccCCCc
Q psy14496 180 IIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 180 ~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+ ..++.+|.||.|.|...
T Consensus 242 ~-------~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 242 D-------VSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp C-------EEEEECSEEEECSCEEE
T ss_pred c-------eEEEecCEEEEEeCCcc
Confidence 1 25789999999999543
No 303
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.49 E-value=0.00071 Score=66.46 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=69.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
..|+|||+|+.|+-+|..|++. |.+|+++++.+.+..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------- 189 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF------ADEVTVIHRRDTLRA------------------------------------- 189 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCCS-------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEeCCCcCCc-------------------------------------
Confidence 5799999999999999999999 999999998754310
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHH-CCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN-MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
. ..+.+.+.+ .|++++++++++++.. ++.+.+|.+.+. .+|+
T Consensus 190 ---------~----------------------~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~---~~g~- 232 (325)
T 2q7v_A 190 ---------N----------------------KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNL---KTGE- 232 (325)
T ss_dssp ---------C----------------------HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEET---TTCC-
T ss_pred ---------c----------------------hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEEC---CCCc-
Confidence 0 012233333 5999999999999975 355666766320 1221
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
..++.+|.||.|.|...
T Consensus 233 ------~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 233 ------VSELATDGVFIFIGHVP 249 (325)
T ss_dssp ------EEEEECSEEEECSCEEE
T ss_pred ------EEEEEcCEEEEccCCCC
Confidence 13789999999999543
No 304
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.48 E-value=4.9e-05 Score=82.04 Aligned_cols=36 Identities=33% Similarity=0.672 Sum_probs=33.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCC--------CcEEEEcCCC-CC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKE--------IKICVLEKGS-EL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G--------~~V~ViEk~~-~~ 63 (561)
..+|+|||||+|||++|+.|++. | ++|+|||+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~------g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL------AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH------HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CcccccCCCceEEEEeccCccc
Confidence 47999999999999999999998 7 9999999998 77
No 305
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.46 E-value=0.00067 Score=70.20 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=29.6
Q ss_pred CCEEEEecCCccCCCccccc-chHHHHHHHHHHHHHHHHHhcC
Q psy14496 332 DGGAFIGCNAGFMNVSRIKG-IHTSIKSGILVADSIFKKICSN 373 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G-~~~Ai~~a~~lA~~l~~~l~~~ 373 (561)
++++++||++.. ..| +..|+.+|..+|..|...+..+
T Consensus 360 p~vya~Gd~~~g-----~~~~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 360 PGLYCSGWVKRG-----PTGVITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp TTEEECTHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCcC-----CCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 689999999842 234 4589999999999999888654
No 306
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.45 E-value=0.00084 Score=72.10 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=30.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
-+|+|||||+.|+-+|..|++. |.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL------GGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCEEEEEECC
Confidence 4799999999999999999999 9999999986
No 307
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=97.45 E-value=3.3e-05 Score=75.94 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=43.3
Q ss_pred EEcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC---------cccccCCCCCeeEE
Q psy14496 483 ILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK---------TCDIKDPTQNIEWI 548 (561)
Q Consensus 483 ~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~~cp~~~i~~~ 548 (561)
.++|.+.|+. |+.|+.+||.+++.+.... .+.++|+.|+ .|..+||++||.+.
T Consensus 177 v~id~~kCig------Cg~Cv~aCP~~Ai~~~~~~-------~~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g 238 (352)
T 2ivf_B 177 VLVDQERCKG------HRHCVEACPYKAIYFNPVS-------QTSEKCILCYPRIEKGIANACNRQCPGRVRAFG 238 (352)
T ss_dssp EEECTTTCCC------CCHHHHHCTTCCEEEETTT-------TEEEECCTTHHHHTTTBCCHHHHTCTTCCEEEE
T ss_pred EEechhhcCC------chHHHhhcCccceeccccc-------ccccccCCCcchhhcCCCChHHHhcCccceecc
Confidence 3458889988 5779999999999886421 2457899996 99999999999984
No 308
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=97.44 E-value=3.2e-05 Score=77.74 Aligned_cols=41 Identities=24% Similarity=0.515 Sum_probs=36.1
Q ss_pred cccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCe
Q psy14496 500 GPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI 545 (561)
Q Consensus 500 ~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i 545 (561)
+.|+..||.+|++++. .++.+|.++|++||.|..+||+.++
T Consensus 278 ~~vv~~CPt~ai~~~~-----~~l~Id~~~C~~Cg~Ci~~CP~al~ 318 (437)
T 3or1_A 278 AEVVGLCPTGCMTYES-----GTLSIDNKNCTRCMHCINTMPRALK 318 (437)
T ss_dssp HHTTTTCTTCCEEEET-----TEEEECGGGCCCCSHHHHHCTTTEE
T ss_pred hhhhccCcHHheeecC-----CEEEEccccCCchhhhHhhCcHhhc
Confidence 4699999999999963 4799999999999999999998543
No 309
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.42 E-value=0.0001 Score=74.49 Aligned_cols=35 Identities=17% Similarity=0.094 Sum_probs=32.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS------GTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCcc
Confidence 5899999999999999999999 9999999998764
No 310
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=97.38 E-value=3.2e-05 Score=69.91 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=43.0
Q ss_pred EEcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC---------cccccCCCCCeeEE
Q psy14496 483 ILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK---------TCDIKDPTQNIEWI 548 (561)
Q Consensus 483 ~~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~~cp~~~i~~~ 548 (561)
.++|.+.|+. ++.|+.+||.+++++.+. . . .++|+.|+ .|..+||++||++.
T Consensus 83 ~~id~~~Cig------C~~C~~~CP~~Ai~~~~~--~--~----~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g 143 (195)
T 2vpz_B 83 VLVDPKKCIA------CGACIAACPYDARYLHPA--G--Y----VSKCTFCAHRLEKGKVPACVETCPTYCRTFG 143 (195)
T ss_dssp EEECTTTCCC------CCHHHHHCTTCCCEECTT--S--S----EECCCTTHHHHHTTCCCHHHHSCTTCCEEEE
T ss_pred eeecCCCCCC------cChhHhhCCCCCeEECCC--C--C----CccCcCcchHHhCCCCchhHhhCCcccEEEe
Confidence 3458899988 577999999999988643 1 1 57899999 79999999999984
No 311
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.37 E-value=0.0017 Score=67.28 Aligned_cols=38 Identities=26% Similarity=0.420 Sum_probs=33.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
..+|+|||||..|+-+|..|++. .|+.+|+++++.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~----~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDS----YPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhc----CCCCeEEEEEeCCCC
Confidence 46899999999999999999987 558899999998754
No 312
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=97.32 E-value=5.4e-05 Score=77.72 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=43.4
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC---------cccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK---------TCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~~cp~~~i~~~ 548 (561)
++|.+.|+. |+.|+.+||.+++++.... + +.++|+.|| .|...||++||.+.
T Consensus 211 ~id~~kCig------Cg~Cv~~CP~~AI~~~~~~-~------~~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 211 LIDQDKCRG------WRMCITGCPYKKIYFNWKS-G------KSEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp EECTTTCCC------CCCHHHHCTTCCEEEETTT-T------EEEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred EECHHHCCC------chHHHhhCCccceecccCC-C------CcccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 458899988 5679999999999986531 1 367899999 99999999999875
No 313
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.32 E-value=0.0008 Score=65.49 Aligned_cols=40 Identities=13% Similarity=-0.076 Sum_probs=30.5
Q ss_pred eecCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhc
Q psy14496 329 FIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372 (561)
Q Consensus 329 ~~~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~ 372 (561)
++.++++++||++... ..-+..|+.+|..+|..|.+.|..
T Consensus 262 Ts~p~IyA~GDv~~~~----~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 262 TSEKNIYLAGETTTQG----PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CSSTTEEECSHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCCc----chHHHHHHHHHHHHHHHHHHHHhh
Confidence 3448999999987421 123678999999999999998864
No 314
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.28 E-value=3.2e-05 Score=71.10 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=42.4
Q ss_pred EcCCCCcc--cccccccccccccccCCeeEEEEeecCceeEEEEccCCCccC------C---cccccCCCCCeeEE
Q psy14496 484 LKNKKIPI--HINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHC------K---TCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~--~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~C------g---~C~~~cp~~~i~~~ 548 (561)
++|.+.|+ . ++.|+.+||.+++++.+.. .+.++|..| | .|..+||++||++.
T Consensus 102 ~id~~~C~~~~------C~~C~~~CP~~Ai~~~~~~-------~~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~ 164 (214)
T 1h0h_B 102 LFTPKTKDLED------YESVISACPYDVPRKVAES-------NQMAKCDMCIDRITNGLRPACVTSCPTGAMNFG 164 (214)
T ss_dssp EECGGGGGCSC------HHHHHHHCTTCCCEECTTS-------SCEECCCTTHHHHTTTCCCHHHHHCSSSCEEEE
T ss_pred EEeHHHCcccc------ccHHHHhcCCCCeEecCCC-------cccCcCCCCcchhhcCCChhHHHhcCcccEEEc
Confidence 45778898 7 5679999999999876421 146799999 6 99999999999985
No 315
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.27 E-value=0.00018 Score=76.85 Aligned_cols=38 Identities=45% Similarity=0.684 Sum_probs=34.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk~~~~ 63 (561)
+.+||++|||||++|+++|..|++ . |.+|+|||++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~------~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENP------KIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTST------TCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCC------CCcEEEEecCCcc
Confidence 457999999999999999999999 7 9999999998654
No 316
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.26 E-value=0.00055 Score=70.70 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=70.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERF 100 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 100 (561)
..+|+|||||..|+-+|..|.+. |. +|+|+++++...-
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~------Ga~~Vtiv~r~~~~~~----------------------------------- 302 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ------GATSVKCLYRRDRKNM----------------------------------- 302 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCSTTC-----------------------------------
T ss_pred CCEEEEECCChhHHHHHHHHHHc------CCCEEEEEEeCCccCC-----------------------------------
Confidence 46899999999999999999999 87 5999988764310
Q ss_pred hhhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccc---ccc
Q psy14496 101 LFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFG---INK 177 (561)
Q Consensus 101 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~---~~~ 177 (561)
+ . + . . ..+.+++.||++++++.++++.. ++++.+|.+.+.. .+.
T Consensus 303 -----------p-----~-------~---~----~-e~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~ 349 (456)
T 2vdc_G 303 -----------P-----G-------S---Q----R-EVAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADA 349 (456)
T ss_dssp -----------S-----S-------C---H----H-HHHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEE
T ss_pred -----------C-----C-------C---H----H-HHHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCC
Confidence 0 0 0 0 0 12345668999999999988864 3444334332110 012
Q ss_pred CCceecccccC--eEEecCEEEEccCCCc
Q psy14496 178 EGIIKKNFQLG--MELYAKYTLFAEGSRG 204 (561)
Q Consensus 178 ~g~~~~~f~~g--~~i~ad~vV~AdG~~s 204 (561)
+|+......+| .++.+|.||.|.|...
T Consensus 350 ~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 350 TGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp CTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred cCCccccccCCcEEEEECCEEEECCCCCC
Confidence 33322222122 4789999999999654
No 317
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.26 E-value=0.00019 Score=75.44 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=34.2
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
...+||+|||+|++|+++|+.|++. |++|+|||+....
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEA------GVQTLMLEMGQLW 40 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCC
Confidence 3469999999999999999999999 9999999998743
No 318
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=97.24 E-value=6.2e-05 Score=71.51 Aligned_cols=44 Identities=23% Similarity=0.391 Sum_probs=37.1
Q ss_pred ccccccccCCeeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeE
Q psy14496 499 AGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 499 ~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
|+.|+..||.++|.+++. ..++.|..+|+.||.|..+|| ++|+.
T Consensus 176 C~~C~~~CP~g~I~id~~----~~v~~d~~~C~~C~~C~~vCp-~aI~~ 219 (265)
T 2pa8_D 176 CEKAVNVCPEGVFELKDG----KLSVKNELSCTLCEECLRYCN-GSIRI 219 (265)
T ss_dssp CTTHHHHCTTCCEEEETT----EEEESCGGGCCCCCHHHHHHT-TSEEE
T ss_pred HHHHHHhCcccCeEecCC----eeEEeccccCCCchHHHHhCC-CceEE
Confidence 567999999999998652 345678899999999999999 89864
No 319
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.22 E-value=0.0027 Score=62.26 Aligned_cols=97 Identities=15% Similarity=0.260 Sum_probs=69.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||+|+.|+-+|..|++. +.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~------~~~v~~~~~~~~~~~~----------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI------AKEVSIIHRRDKFRAH----------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------BSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhh------CCeEEEEEecCcCCcc-----------------------------------
Confidence 46899999999999999999999 9999999987643110
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
. . ..+.+++.||+++.++++.++..+ ++ +.+|.+.+. .+|+
T Consensus 193 ----------~-------------------~----~~~~l~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~---~~g~- 233 (332)
T 3lzw_A 193 ----------E-------------------H----SVENLHASKVNVLTPFVPAELIGE-DK-IEQLVLEEV---KGDR- 233 (332)
T ss_dssp ----------H-------------------H----HHHHHHHSSCEEETTEEEEEEECS-SS-CCEEEEEET---TSCC-
T ss_pred ----------H-------------------H----HHHHHhcCCeEEEeCceeeEEecC-Cc-eEEEEEEec---CCCc-
Confidence 0 0 122345689999999999999754 22 445655431 1121
Q ss_pred ecccccCeEEecCEEEEccCCCc
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
+.++.+|.||.|.|...
T Consensus 234 ------~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 234 ------KEILEIDDLIVNYGFVS 250 (332)
T ss_dssp ------EEEEECSEEEECCCEEC
T ss_pred ------eEEEECCEEEEeeccCC
Confidence 35789999999999543
No 320
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=97.20 E-value=0.00011 Score=78.42 Aligned_cols=61 Identities=18% Similarity=0.177 Sum_probs=46.5
Q ss_pred CceEEcCCCCcccccccccc--cccccccCC-----eeEEEEeecCceeEEEEccCCCccCCcccccCCCCCeeE
Q psy14496 480 IHLILKNKKIPIHINFSIYA--GPEARYCPA-----GVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 480 ~h~~~~~~~~c~~~~~~~~~--~~c~~~CP~-----~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
..|-|+|.+.|.-. .| --|.++||. .|+++.+++ ++..|..+.|++||.|..+||..+|+.
T Consensus 19 ~~~~~~~~~~c~p~----~c~~~~c~~~cp~~~~~~~~~~~~~~~---~~~~i~e~~c~gc~~~~~~~p~~~i~i 86 (607)
T 3bk7_A 19 MRIAVIDYDKCNPD----KCGHFLCERVCPVNRMGGEAIIIDEEN---YKPIIQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp EEEEECCGGGCCTT----TSSSCHHHHHCHHHHTTCCSEEEETTT---TEEEECTTTCCCCCHHHHHCSSCCCEE
T ss_pred ceEEEeeccccCCC----CCChhhHhhhCCCCcCCceEEEEcCCC---CcceeeecccCccccccCCCCcceEEE
Confidence 45667777766432 24 469999994 478876532 478999999999999999999988765
No 321
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.20 E-value=0.00074 Score=65.15 Aligned_cols=38 Identities=13% Similarity=0.058 Sum_probs=31.9
Q ss_pred cCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcC
Q psy14496 331 FDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSN 373 (561)
Q Consensus 331 ~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~ 373 (561)
.++++++||+++. ...+..|+.+|..+|..|.+.+...
T Consensus 257 ~~~vya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 257 ARGIFACGDVARP-----AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp STTEEECSGGGCT-----TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEeecCCc-----hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 3799999999874 3467899999999999999988653
No 322
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.20 E-value=0.0011 Score=68.89 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=69.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhh
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFL 101 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 101 (561)
...|+|||||+.|+-+|..|++. |.+|+|+++.+.+....
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM------GVQTHIIEMLDRALITL---------------------------------- 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTS----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCcCCCCC----------------------------------
Confidence 46899999999999999999999 99999999876542100
Q ss_pred hhcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCce
Q psy14496 102 FLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181 (561)
Q Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~ 181 (561)
++ ..+.+.+.+.. .++++.+++|+++..++++. +.|.+.+ .+|+
T Consensus 212 --------------~d-------------~~~~~~l~~~l---~v~i~~~~~v~~i~~~~~~~-v~v~~~~----~~G~- 255 (466)
T 3l8k_A 212 --------------ED-------------QDIVNTLLSIL---KLNIKFNSPVTEVKKIKDDE-YEVIYST----KDGS- 255 (466)
T ss_dssp --------------CC-------------HHHHHHHHHHH---CCCEECSCCEEEEEEEETTE-EEEEECC----TTSC-
T ss_pred --------------CC-------------HHHHHHHHhcC---EEEEEECCEEEEEEEcCCCc-EEEEEEe----cCCc-
Confidence 00 02233333333 29999999999997653133 2355531 1221
Q ss_pred ecccccCeEEecCEEEEccCCCch
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
..++.+|.||.|.|....
T Consensus 256 ------~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 256 ------KKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp ------CEEEEESCEEECCCEEEC
T ss_pred ------eEEEEcCEEEECcCCCcc
Confidence 137999999999996544
No 323
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=97.17 E-value=7e-05 Score=82.71 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=41.5
Q ss_pred EcCCCCccccccccccccccccc----CCeeEEEEeecCceeEEEE--ccCCCccCCcccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYC----PAGVYEFIIEKNKIQHLQI--NAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~C----P~~~~~~~~~~~~~~~~~~--~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.+|.+.|+. |+.|+++| |.+++.+..... ...+.. +...|+.||.|..+||++||+-+
T Consensus 175 ~~d~~~CI~------C~~Cv~~C~~~~~~~~i~~~~~g~-~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~ 238 (783)
T 3i9v_3 175 ILDRERCIH------CKRCVRYFEEVPGDEVLDFIERGV-HTFIGTMDFGLPSGFSGNITDICPVGALLDL 238 (783)
T ss_dssp EECTTTCCC------CCHHHHHHHHTTCCCCCEECSCTT-SCCEECSSTTCCSTTTTTHHHHCSSSSEEEG
T ss_pred EEchhhCCC------ccHHHHHhhhhcCCceeeeecCCC-ccEEccCCCCCCCccchhHHhhcccCceecc
Confidence 458899998 57899999 677877653211 111111 22379999999999999999764
No 324
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.17 E-value=0.0011 Score=65.30 Aligned_cols=35 Identities=23% Similarity=0.527 Sum_probs=31.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|||+|+.|+-+|..|++. |.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~------g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF------ARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------CSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEcCCc
Confidence 46899999999999999999999 999999998754
No 325
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.15 E-value=0.0021 Score=62.52 Aligned_cols=34 Identities=24% Similarity=0.522 Sum_probs=31.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|+|||||..|+-+|..|++. |.+|+|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~------G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY------GSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh------CCeeeeeccccc
Confidence 5799999999999999999999 999999997654
No 326
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.15 E-value=0.00034 Score=73.43 Aligned_cols=37 Identities=30% Similarity=0.459 Sum_probs=34.1
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..++|++|||+|++|+++|..|++. |.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA------GIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 4579999999999999999999998 999999999864
No 327
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=97.14 E-value=7.1e-05 Score=72.32 Aligned_cols=52 Identities=21% Similarity=0.276 Sum_probs=41.9
Q ss_pred EcCCCCcccccccccccccccccCCeeEEEEeecCceeEEEEccCCCccCC---------cccccCCCCCeeEE
Q psy14496 484 LKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK---------TCDIKDPTQNIEWI 548 (561)
Q Consensus 484 ~~~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~~~~~~~~~~~~~~C~~Cg---------~C~~~cp~~~i~~~ 548 (561)
++|.+.|+. |+.|+.+||.+++++.+. .+ ...+|+.|+ .|...||++||.+.
T Consensus 127 ~id~~~Cig------Cg~C~~~CP~~ai~~~~~-~~------~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~ 187 (294)
T 1kqf_B 127 DFQSENCIG------CGYCIAGCPFNIPRLNKE-DN------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFG 187 (294)
T ss_dssp EECGGGCCC------CCHHHHHCTTCCCEEETT-TT------EEECCCTTHHHHTTTCCCHHHHHCTTSCEEEE
T ss_pred EeCcccCCC------cchhhhcCCCCCcEecCC-CC------CeeeCCCccchhhcCccHHHHHhCCcCcEEEe
Confidence 457788987 577999999999988643 11 224899998 99999999999875
No 328
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.02 E-value=0.00063 Score=72.45 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=39.0
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
.|+|||+|||+|..|..+|..|++. |.+|++|||++..|+..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~------g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRS------GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCCcccCcc
Confidence 4689999999999999999999999 99999999999998753
No 329
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.98 E-value=0.0003 Score=74.37 Aligned_cols=36 Identities=47% Similarity=0.684 Sum_probs=32.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
.+||+||||||+||+++|..|++ |.+|+|||+++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-------g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-------TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-------CCcEEEEecCCCc
Confidence 46999999999999999999976 6899999999754
No 330
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.96 E-value=0.0017 Score=73.51 Aligned_cols=100 Identities=15% Similarity=0.147 Sum_probs=72.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceeecceeChhhHHhhccccccCCccccccchhhhhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLF 102 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~G~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 102 (561)
..|+|||+|+.|+-+|..|++. |.+|+|+|+.+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~------G~~Vtvv~~~~~~~~------------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT------GGVVAVIDARSSISA------------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG------TCCSEEEESCSSCCH-------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHc------CCcEEEEECCCccch-------------------------------------
Confidence 5799999999999999999999 999999998764300
Q ss_pred hcCCCCcccCCCCCCceeecCCcEEeeHHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccc-cCCce
Q psy14496 103 LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGIN-KEGII 181 (561)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~-~~g~~ 181 (561)
. .+.+++.||++++++.++++..++++++.+|.+.+.+.. .+|+
T Consensus 322 -----------------------------~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~- 366 (965)
T 2gag_A 322 -----------------------------A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGG- 366 (965)
T ss_dssp -----------------------------H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEE-
T ss_pred -----------------------------h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCc-
Confidence 0 233456899999999999997532455666666420000 0111
Q ss_pred ecccccCeEEecCEEEEccCCCchh
Q psy14496 182 KKNFQLGMELYAKYTLFAEGSRGHL 206 (561)
Q Consensus 182 ~~~f~~g~~i~ad~vV~AdG~~s~~ 206 (561)
+.++.+|.||.|.|....+
T Consensus 367 ------~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 367 ------TQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ------EEEEECSEEEEECCEEECC
T ss_pred ------eEEEEcCEEEECCCcCcCh
Confidence 1579999999999976653
No 331
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.94 E-value=0.00049 Score=72.92 Aligned_cols=38 Identities=34% Similarity=0.659 Sum_probs=34.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
+.+|++|||||++|+++|..|++. ||.+|+|||++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-----~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-----PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-----CCCCEEEEecCCcC
Confidence 679999999999999999999885 37999999998654
No 332
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.86 E-value=0.0035 Score=64.73 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=27.7
Q ss_pred CCEEEEecCCccCCCccccc-chHHHHHHHHHHHHHHHHHhc
Q psy14496 332 DGGAFIGCNAGFMNVSRIKG-IHTSIKSGILVADSIFKKICS 372 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G-~~~Ai~~a~~lA~~l~~~l~~ 372 (561)
++++++||++.. ..| +..|+.+|..+|..|...+..
T Consensus 352 pgvya~GD~~~g-----p~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 352 PNEYVVGWIKRG-----PTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp SSEEECTHHHHC-----SCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCC-----CchhHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999853 233 347899999999999877653
No 333
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.82 E-value=0.00024 Score=75.28 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=32.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..+|+|||+|..|+-+|..|++. +.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~------~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET------AKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------BSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh------CCEEEEEEcCCC
Confidence 46899999999999999999999 999999999875
No 334
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.76 E-value=0.00034 Score=73.93 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=32.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..+|+|||+|..|+-+|..|++. +.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE------VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 46899999999999999999999 999999999876
No 335
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.55 E-value=0.0012 Score=50.26 Aligned_cols=24 Identities=25% Similarity=0.654 Sum_probs=22.4
Q ss_pred EEccCCCccCCcccccCCCCCeeE
Q psy14496 524 QINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 524 ~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
++|.++|++||.|..+||.++|++
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~ 25 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQ 25 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEE
T ss_pred eEeCCCCcCccchHHHCChhheEc
Confidence 478899999999999999999988
No 336
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.54 E-value=0.0051 Score=65.03 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=32.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|||+|..|+-+|..|++. +.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ------AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 46899999999999999999999 999999999875
No 337
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.47 E-value=0.0055 Score=67.26 Aligned_cols=33 Identities=15% Similarity=0.056 Sum_probs=31.2
Q ss_pred ccEEEEC--chhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVG--GGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVG--aGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
.+|+||| ||..|+-+|..|++. |.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~------G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA------GHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc------CCEEEEEeccc
Confidence 5899998 999999999999999 99999999887
No 338
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.43 E-value=0.00077 Score=48.46 Aligned_cols=26 Identities=19% Similarity=0.548 Sum_probs=23.4
Q ss_pred EEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 522 HLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 522 ~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.+|.++|++||.|..+|| ++|++.
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEEC
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEc
Confidence 46789999999999999999 998874
No 339
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.40 E-value=0.0021 Score=45.06 Aligned_cols=25 Identities=28% Similarity=0.658 Sum_probs=22.2
Q ss_pred EEEccCCCccCCcccccCCCCCeeEE
Q psy14496 523 LQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 523 ~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
+.+|.++|++||.|..+|| .+|++.
T Consensus 2 i~i~~~~C~~C~~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 2 IVIDHEECIGCESCVELCP-EVFAMI 26 (59)
T ss_dssp EEESSCCCSSCCGGGGTST-TTEEEE
T ss_pred eEEChhhCcChhHHHHHCC-HHheec
Confidence 6789999999999999999 588873
No 340
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.28 E-value=0.0016 Score=49.45 Aligned_cols=26 Identities=19% Similarity=0.584 Sum_probs=23.5
Q ss_pred EEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 522 HLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 522 ~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.+|.++|++||.|..+|| +++++.
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 58899999999999999999 788774
No 341
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.27 E-value=0.013 Score=63.80 Aligned_cols=29 Identities=28% Similarity=0.320 Sum_probs=25.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEE
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICV 56 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~V 56 (561)
...|+|||||..|+-+|..|++. |.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~------G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQP------GESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCC------SSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhc------CCCccc
Confidence 46899999999999999999998 876654
No 342
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=96.25 E-value=0.0018 Score=49.66 Aligned_cols=25 Identities=24% Similarity=0.630 Sum_probs=22.3
Q ss_pred EEccCCCccCCcccccCCCCCeeEE
Q psy14496 524 QINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 524 ~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.++.++|++||.|..+||.++|++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMG 26 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECC
T ss_pred EEeCCcCcChhHHHHHCchhccCcC
Confidence 3578999999999999999999874
No 343
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.18 E-value=0.017 Score=59.08 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=33.5
Q ss_pred cCCEEEEecCCccCCCc-------ccccchHHHHHHHHHHHHHHHHHhcCC
Q psy14496 331 FDGGAFIGCNAGFMNVS-------RIKGIHTSIKSGILVADSIFKKICSNN 374 (561)
Q Consensus 331 ~~~v~lvGDAa~~~~P~-------~g~G~~~Ai~~a~~lA~~l~~~l~~~~ 374 (561)
.++|+++||+++..++. ..+-...|+..|..+|+.|...+.+..
T Consensus 286 ~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 286 YKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp STTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 37999999999865421 234467899999999999999887544
No 344
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=96.18 E-value=0.0017 Score=49.36 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=22.0
Q ss_pred EccCCCccCCcccccCCCCCeeEE
Q psy14496 525 INAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 525 ~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.++|++||.|..+||.++|++.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEEC
T ss_pred eeCCCCCChhhHHHHCChhccCCC
Confidence 578899999999999999999874
No 345
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=96.17 E-value=0.0018 Score=51.66 Aligned_cols=28 Identities=18% Similarity=0.418 Sum_probs=25.7
Q ss_pred EEEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 522 HLQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 522 ~~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
.+.+|.++|++||.|..+||.++|++..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~ 64 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYD 64 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred eEEEehhhCCChhhHHHHcCccCeeccc
Confidence 5889999999999999999999999854
No 346
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=96.14 E-value=0.0025 Score=44.13 Aligned_cols=25 Identities=28% Similarity=0.586 Sum_probs=21.7
Q ss_pred EEEccCCCccCCcccccCCCCCeeEE
Q psy14496 523 LQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 523 ~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
+.+ .++|++||.|..+||.++|++.
T Consensus 2 ~~i-~~~C~~C~~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCGACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCCTTGGGCTTCCEECC
T ss_pred eEe-cccCcChhhHHHHCCccccCcC
Confidence 345 7899999999999999999864
No 347
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=96.12 E-value=0.0015 Score=49.37 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=21.8
Q ss_pred EccCCCccCCcccccCCCCCeeEE
Q psy14496 525 INAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 525 ~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
++.++|++||.|..+||.++|++.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECC
T ss_pred EeCCCCcChhhHHHHcChhccCcC
Confidence 577899999999999999999873
No 348
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=96.11 E-value=0.0024 Score=46.03 Aligned_cols=27 Identities=19% Similarity=0.330 Sum_probs=23.8
Q ss_pred eEEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 521 QHLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 521 ~~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.++.+|.++|++||.|..+||. +|++.
T Consensus 2 ~~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 2 WKVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred cEEEECcccCcCchHHHHhCCc-eEEEC
Confidence 3678999999999999999995 88874
No 349
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.10 E-value=0.02 Score=58.59 Aligned_cols=44 Identities=9% Similarity=-0.114 Sum_probs=33.7
Q ss_pred cCCEEEEecCCccCCCc-------ccccchHHHHHHHHHHHHHHHHHhcCC
Q psy14496 331 FDGGAFIGCNAGFMNVS-------RIKGIHTSIKSGILVADSIFKKICSNN 374 (561)
Q Consensus 331 ~~~v~lvGDAa~~~~P~-------~g~G~~~Ai~~a~~lA~~l~~~l~~~~ 374 (561)
.++|+.+||+++..++. ..+-...|+..|..+|+.|...+.+..
T Consensus 297 ~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 297 YANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp CTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 37999999999876421 234467899999999999999886543
No 350
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.08 E-value=0.002 Score=48.59 Aligned_cols=27 Identities=26% Similarity=0.460 Sum_probs=24.2
Q ss_pred EEEccCCCccCCcccccCCCCCeeEEC
Q psy14496 523 LQINAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 523 ~~~~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
..++.++|++||.|..+||.++|++..
T Consensus 3 ~~~~~~~C~~Cg~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 3 TVKIYDTCIGCTQCVRACPTDVLEMVP 29 (80)
T ss_dssp EEEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred CcccCCcCcChhHHHHHCCcccccccc
Confidence 567889999999999999999998754
No 351
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.03 E-value=0.015 Score=60.15 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=32.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..+|+|||+|.+|+-+|..|++. |.+|+|+++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~------g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY------GAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT------TCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh------CCeEEEEEECCC
Confidence 46899999999999999999999 999999998754
No 352
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.02 E-value=0.031 Score=56.57 Aligned_cols=52 Identities=19% Similarity=0.258 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 133 LVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 133 l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
+.+.+.+.+++.||+++++++|+++.. + +|.+ ++|.++.+|+||.|.|....
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~---------------~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVD---------------EKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEE---------------TTSCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEE---------------CCCCEEeeeEEEECCCCCcc
Confidence 455667777788999999999998852 2 2444 34678999999999996543
No 353
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.93 E-value=0.031 Score=56.36 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=32.2
Q ss_pred cCCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHhcCC
Q psy14496 331 FDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNN 374 (561)
Q Consensus 331 ~~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~~~~ 374 (561)
.++|+.+||++...+ ..+-...|...|..+|+.|...+.+..
T Consensus 286 ~p~VfAiGDva~~~~--~pk~a~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 286 QPGIHVIGDACNAAP--MPKSAYSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp STTEEECGGGBCCTT--SCBSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEecccccCCC--CCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 379999999886432 123457899999999999999887544
No 354
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.86 E-value=0.011 Score=50.00 Aligned_cols=38 Identities=24% Similarity=0.310 Sum_probs=34.2
Q ss_pred CCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 19 ~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..++-.|+|+|+|..|..+|..|.+. |++|+++|+.+.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 41 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSRT 41 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 44667899999999999999999999 999999999754
No 355
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.77 E-value=0.0086 Score=51.63 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=32.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
....|+|+|+|..|+.+|..|++. |++|+++|+.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 456899999999999999999999 999999998754
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.62 E-value=0.085 Score=54.97 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=30.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+|+|||+|-+|.-.|..|++. .++.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~----~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKR----YPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----STTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhc----CCCceEEEEeCCCc
Confidence 5799999999999999999876 33789999988764
No 357
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.60 E-value=0.025 Score=48.51 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=31.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
.-.|+|+|+|..|...|..|.+. |++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR------GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCC
Confidence 45799999999999999999999 99999999974
No 358
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.49 E-value=0.023 Score=56.05 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=29.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..+|+|||+|..|+-+|..|++. + +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~------~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV------A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh------C-CEEEEECCC
Confidence 46899999999999999999999 8 699999874
No 359
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=95.39 E-value=0.0043 Score=43.60 Aligned_cols=24 Identities=25% Similarity=0.689 Sum_probs=21.0
Q ss_pred EEEccCCCccCCcccccCCCCCeeE
Q psy14496 523 LQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 523 ~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
+.+|.++|++||.|..+||. +|.+
T Consensus 3 ~~i~~~~C~~C~~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 3 VRVDADACIGCGVCENLCPD-VFQL 26 (60)
T ss_dssp SEECTTTCCSCCSSTTTCTT-TBCC
T ss_pred EEEchhhCCCChHHHHhCcH-HHeE
Confidence 56899999999999999996 7665
No 360
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=95.34 E-value=0.0086 Score=44.70 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=22.5
Q ss_pred EEccCCCcc--CCcccccCCCCCeeEE
Q psy14496 524 QINAQNCIH--CKTCDIKDPTQNIEWI 548 (561)
Q Consensus 524 ~~~~~~C~~--Cg~C~~~cp~~~i~~~ 548 (561)
.++.++|++ ||.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcchhHHhcccccEEeC
Confidence 468899999 9999999999999884
No 361
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=95.23 E-value=0.0031 Score=44.13 Aligned_cols=23 Identities=26% Similarity=0.733 Sum_probs=20.2
Q ss_pred EEEccCCCccCCcccccCCCCCeeE
Q psy14496 523 LQINAQNCIHCKTCDIKDPTQNIEW 547 (561)
Q Consensus 523 ~~~~~~~C~~Cg~C~~~cp~~~i~~ 547 (561)
+.+| ++|++||.|..+||. +|.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTT-TEEE
T ss_pred cEEC-CcCccchHHHHhCCc-cEEE
Confidence 4578 999999999999998 7776
No 362
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.09 E-value=2.2 Score=43.94 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHCC-CEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCch
Q psy14496 130 LSDLVRWMGKKAENMG-IDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGH 205 (561)
Q Consensus 130 r~~l~~~L~~~a~~~g-v~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s~ 205 (561)
-..+.+.|.+.+.+.| ++|+++++|++|..+++ . +.|.+. +|.+++||.||.|.|....
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~-v~v~~~---------------~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-A-ARVTAR---------------DGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-S-EEEEET---------------TCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-E-EEEEEC---------------CCCEEEcCEEEECCCHHHH
Confidence 3478888888888888 99999999999987533 3 346553 2457999999999997543
No 363
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.07 E-value=0.021 Score=46.21 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=31.5
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~ 61 (561)
+...|+|+|+|..|..+|..|.+. | ++|+++++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH
Confidence 345799999999999999999999 9 9999999864
No 364
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.84 E-value=0.026 Score=47.27 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=30.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|||+|..|..+|..|++. |++|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 4699999999999999999999 99999999864
No 365
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=94.79 E-value=0.0074 Score=45.19 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=22.5
Q ss_pred EEccCCCcc--CCcccccCCCCCeeEE
Q psy14496 524 QINAQNCIH--CKTCDIKDPTQNIEWI 548 (561)
Q Consensus 524 ~~~~~~C~~--Cg~C~~~cp~~~i~~~ 548 (561)
.+|.++|++ ||.|..+||.++|++.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcC
Confidence 467889999 9999999999999984
No 366
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=94.65 E-value=0.0083 Score=48.02 Aligned_cols=25 Identities=28% Similarity=0.423 Sum_probs=22.5
Q ss_pred EEccCCCccCC--cccccCCCCCeeEE
Q psy14496 524 QINAQNCIHCK--TCDIKDPTQNIEWI 548 (561)
Q Consensus 524 ~~~~~~C~~Cg--~C~~~cp~~~i~~~ 548 (561)
.+|.++|++|| .|..+||.++|++.
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred eECccccCCccCcHHHHHcCccceEcC
Confidence 46889999999 99999999999874
No 367
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.64 E-value=0.031 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=30.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|+|+|..|..+|..|++. |++|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 368
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=94.60 E-value=0.0091 Score=53.04 Aligned_cols=24 Identities=25% Similarity=0.490 Sum_probs=21.2
Q ss_pred ccCCCccCCcccccCCCCCeeEEC
Q psy14496 526 NAQNCIHCKTCDIKDPTQNIEWIT 549 (561)
Q Consensus 526 ~~~~C~~Cg~C~~~cp~~~i~~~~ 549 (561)
|.++|++||.|..+||+++|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~ 72 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEP 72 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEE
T ss_pred CCccCcccccchhhCCcccEEeec
Confidence 567999999999999999998654
No 369
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=94.13 E-value=0.0032 Score=58.80 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=35.1
Q ss_pred cCCCCcccccccccccccccccCCeeEEE----Ee-----------ecCce---eEEE-----EccCCCccCCcccccCC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYEF----II-----------EKNKI---QHLQ-----INAQNCIHCKTCDIKDP 541 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~~----~~-----------~~~~~---~~~~-----~~~~~C~~Cg~C~~~cp 541 (561)
.+.+.|+. |+.|+.+||...... .. +.... ..+. .+...|+.||.|..+||
T Consensus 144 ~~~~~Ci~------Cg~C~~~CP~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP 217 (238)
T 2wdq_B 144 DGLYECIL------CACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCP 217 (238)
T ss_dssp TTTTTCCC------CCTTGGGCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCT
T ss_pred hccccccc------cCCchhhCcCCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhcC
Confidence 46788988 578999999875310 00 00000 0010 25689999999999999
Q ss_pred CCC
Q psy14496 542 TQN 544 (561)
Q Consensus 542 ~~~ 544 (561)
.++
T Consensus 218 ~gi 220 (238)
T 2wdq_B 218 KGL 220 (238)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
No 370
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=93.85 E-value=0.011 Score=67.97 Aligned_cols=27 Identities=30% Similarity=0.531 Sum_probs=24.8
Q ss_pred EEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 522 HLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 522 ~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
...+|.++|++||.|..+||+++|++.
T Consensus 680 ~p~~d~~kCi~Cg~Cv~vCP~~AI~~~ 706 (1231)
T 2c42_A 680 VPQWVPENCIQCNQCAFVCPHSAILPV 706 (1231)
T ss_dssp EEEECTTTCCCCCHHHHHCSSCCEEEE
T ss_pred ceEEeCccCCchhhHHHhCCccccccc
Confidence 567899999999999999999999874
No 371
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=93.80 E-value=0.016 Score=46.22 Aligned_cols=25 Identities=24% Similarity=0.306 Sum_probs=22.3
Q ss_pred EEccCCCccC--CcccccCCCCCeeEE
Q psy14496 524 QINAQNCIHC--KTCDIKDPTQNIEWI 548 (561)
Q Consensus 524 ~~~~~~C~~C--g~C~~~cp~~~i~~~ 548 (561)
.+|.++|++| |.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~ 28 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEG 28 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEecccCCCCCcChhhhhcCccccCcC
Confidence 4688899988 999999999999874
No 372
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.77 E-value=0.06 Score=52.03 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=31.1
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|.+.|..|++. |++|+++|+.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 4699999999999999999999 999999998753
No 373
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.64 E-value=0.056 Score=52.71 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=31.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
|...|+|||+|-.|.+.|..|++. |++|++++|.+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh
Confidence 346799999999999999999999 99999999865
No 374
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.57 E-value=0.056 Score=45.35 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|+|+|..|..+|..|++. |++|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 375
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.32 E-value=0.093 Score=51.35 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=32.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
+...|+|||||-.|.++|..|++. |+ +|+++|..+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChh
Confidence 345799999999999999999999 98 9999998753
No 376
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=93.20 E-value=0.024 Score=57.52 Aligned_cols=27 Identities=37% Similarity=0.588 Sum_probs=24.8
Q ss_pred EEEEccCCCccCCcccccCCCCCeeEE
Q psy14496 522 HLQINAQNCIHCKTCDIKDPTQNIEWI 548 (561)
Q Consensus 522 ~~~~~~~~C~~Cg~C~~~cp~~~i~~~ 548 (561)
.+.+|.++|++||.|..+||.+||++.
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~ 53 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGE 53 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCC
T ss_pred eEEECcccCCCccHHHHhcCcCceecc
Confidence 588999999999999999999999864
No 377
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.18 E-value=0.076 Score=53.03 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=32.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|||+|++|+.+|..|... |.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 46899999999999999999999 999999998864
No 378
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.13 E-value=0.083 Score=48.21 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.6
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.|+|+|+|..|..+|..|.+. |++|+++|+.+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR------KYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 599999999999999999999 999999998753
No 379
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.06 E-value=0.067 Score=51.83 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
-.|+|||||..|..-|..++.. |++|+|+|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 5799999999999999999999 999999998653
No 380
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.98 E-value=0.068 Score=54.66 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=31.9
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
..|+|||.|++|+++|..|+++ |++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCc
Confidence 4699999999999999999999 9999999987654
No 381
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=92.90 E-value=0.0018 Score=60.70 Aligned_cols=53 Identities=13% Similarity=0.116 Sum_probs=34.2
Q ss_pred cCCCCcccccccccccccccccCCeeEE---EEe-----------ecC--c-eeEE--E---EccCCCccCCcccccCCC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYE---FII-----------EKN--K-IQHL--Q---INAQNCIHCKTCDIKDPT 542 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~---~~~-----------~~~--~-~~~~--~---~~~~~C~~Cg~C~~~cp~ 542 (561)
.+.+.|+. |+.|+.+||..++. +.. +.. + ..++ . .+...|+.||.|..+||.
T Consensus 143 ~~~~~Ci~------Cg~C~~~CP~~~~~~~~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 216 (243)
T 1kf6_B 143 HQFSGCIN------CGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 216 (243)
T ss_dssp GGGGCCCC------CCHHHHHCHHHHHCTTSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhccc------cCccccccCCCcccCCCCCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCC
Confidence 46678988 57899999987642 000 000 0 0011 1 245789999999999998
Q ss_pred C
Q psy14496 543 Q 543 (561)
Q Consensus 543 ~ 543 (561)
+
T Consensus 217 g 217 (243)
T 1kf6_B 217 H 217 (243)
T ss_dssp C
T ss_pred C
Confidence 5
No 382
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.90 E-value=0.073 Score=51.68 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=30.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
|..+|+|||+|-.|.+.|..|++. |++|++++|.+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD 35 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc
Confidence 345799999999999999999999 99999999864
No 383
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.77 E-value=0.071 Score=51.32 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=33.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
+...|.|||.|-.|...|..|++. |++|+++++.+..
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~ 50 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIEA 50 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHHH
Confidence 456899999999999999999999 9999999988753
No 384
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.76 E-value=0.085 Score=54.16 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=31.7
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|||.|.+|+++|..|+++ |++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCc
Confidence 46799999999999999999999 99999999875
No 385
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.50 E-value=0.11 Score=47.50 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=31.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
....|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE------GAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG------CCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC
Confidence 347899999999999999999999 9999999864
No 386
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.46 E-value=0.092 Score=51.97 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=32.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|||+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL------GAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 46899999999999999999999 999999998864
No 387
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.42 E-value=0.21 Score=51.27 Aligned_cols=43 Identities=26% Similarity=0.325 Sum_probs=39.6
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCceee
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS 69 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~~~ 69 (561)
.++||+|||||++||++|+.|++. |++|+|+|+++.+|+...+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~------G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD------GKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCCCCCccccc
Confidence 468999999999999999999999 9999999999999987543
No 388
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.38 E-value=0.11 Score=53.23 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.6
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|-.|+.+|..|++. |++|+++|+.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCHH
Confidence 5799999999999999999999 999999998754
No 389
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.35 E-value=0.094 Score=50.39 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=31.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
|..+|+|||+|-.|.+.|..|++. |++|++++|..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEecc
Confidence 345799999999999999999999 99999999874
No 390
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.32 E-value=0.13 Score=49.02 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|...|..|++. |++|+++|+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998753
No 391
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.31 E-value=0.12 Score=50.07 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=32.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|.|||.|-.|...|..|++. |++|+++++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 35799999999999999999999 999999998764
No 392
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.29 E-value=0.13 Score=50.86 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=32.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+...|.|||+|-.|.+.|..|++. |++|+++++.+.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~~ 63 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK------GQKVRLWSYESD 63 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 346899999999999999999999 999999998643
No 393
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=92.13 E-value=0.0063 Score=57.27 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=33.8
Q ss_pred cCCCCcccccccccccccccccCCeeEE---E-E-----------eecCc---ee--EEEE---ccCCCccCCcccccCC
Q psy14496 485 KNKKIPIHINFSIYAGPEARYCPAGVYE---F-I-----------IEKNK---IQ--HLQI---NAQNCIHCKTCDIKDP 541 (561)
Q Consensus 485 ~~~~~c~~~~~~~~~~~c~~~CP~~~~~---~-~-----------~~~~~---~~--~~~~---~~~~C~~Cg~C~~~cp 541 (561)
.+.+.|+. |+.|+.+||..... + . .+... .. .... ....|+.||.|..+||
T Consensus 153 ~~~~~Ci~------CG~C~~~CP~~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP 226 (252)
T 2h88_B 153 DGLYECIL------CACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCP 226 (252)
T ss_dssp TTTTTCCC------CCTTGGGCHHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCT
T ss_pred HhHHhchh------hCcchhhCCCCccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcC
Confidence 35678988 57899999987521 0 0 01000 00 0111 3478999999999999
Q ss_pred CCC
Q psy14496 542 TQN 544 (561)
Q Consensus 542 ~~~ 544 (561)
.+.
T Consensus 227 ~~i 229 (252)
T 2h88_B 227 KGL 229 (252)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 394
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.01 E-value=0.17 Score=51.17 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=37.6
Q ss_pred CCCCCCCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 13 NKYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 13 ~~~~~~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+...|+.+....|.|||.|-.||.+|..|++. |++|+.+|..+.
T Consensus 12 ~~~~p~~~~m~~IaViGlGYVGLp~A~~~A~~------G~~V~g~Did~~ 55 (444)
T 3vtf_A 12 SGLVPRGSHMASLSVLGLGYVGVVHAVGFALL------GHRVVGYDVNPS 55 (444)
T ss_dssp -CCCCTTCCCCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCHH
T ss_pred CCcCCCCCCCCEEEEEccCHHHHHHHHHHHhC------CCcEEEEECCHH
Confidence 33456666678999999999999999999999 999999998754
No 395
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.90 E-value=0.16 Score=49.34 Aligned_cols=34 Identities=12% Similarity=0.309 Sum_probs=31.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
...|+|||+|-.|.+.|..|++. |+ +|+++|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCc
Confidence 35799999999999999999999 98 999999875
No 396
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.88 E-value=0.14 Score=49.82 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
...|+|||+|-.|.++|..|++. |+ +|+++|+.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 35799999999999999999999 98 999999864
No 397
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.88 E-value=1.5 Score=44.34 Aligned_cols=54 Identities=22% Similarity=0.256 Sum_probs=36.8
Q ss_pred HHHHHHHHHHCCCEEEcCceEeEEEEcCCCCEEEEEecccccccCCceecccccCeEEecCEEEEccCCCc
Q psy14496 134 VRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRG 204 (561)
Q Consensus 134 ~~~L~~~a~~~gv~i~~g~~v~~i~~~~~g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG~~s 204 (561)
.+.+.+..++.||+++.++.|++++ .+.+ .++. .+| ++.++.+|+||.|.|...
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~-~~~~------~~g-------~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE---PDKV-IYED------LNG-------NTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC---SSEE-EEEC------TTS-------CEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe---CCce-EEEe------eCC-------CceEeecceEEEeccCCC
Confidence 3456666677899999999999984 2222 2222 122 235899999999999654
No 398
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.87 E-value=0.14 Score=49.59 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH
Confidence 3699999999999999999999 99999999864
No 399
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.85 E-value=0.16 Score=49.60 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=32.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
|...|+|||||-.|.++|..|++. |+ +|+++|..+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEG 49 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHH
Confidence 345899999999999999999999 98 9999998753
No 400
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.67 E-value=0.096 Score=53.80 Aligned_cols=53 Identities=23% Similarity=0.398 Sum_probs=41.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC--------CCCceeecceeChhhHHhh
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE--------LGAHILSGAIIDPRSIFEL 81 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~--------~g~~~~~G~~~~~~~l~~l 81 (561)
..|+|+|+|-.|.++|..|... |++|+|+|+.+. .+.....|...++..|.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~A 64 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEA 64 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhc
Confidence 4599999999999999999999 999999998743 2334456666666666543
No 401
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.64 E-value=0.16 Score=48.38 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=30.8
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.|.|||+|..|.+.|..|++. |++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCcc
Confidence 589999999999999999999 999999998764
No 402
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.64 E-value=0.15 Score=49.96 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=32.1
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
-|+..|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 5778999999999999999999999 99999999864
No 403
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.58 E-value=0.19 Score=51.19 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=38.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCCCCce
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~g~~~ 67 (561)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVN------GKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCcEEEEecCCCccccc
Confidence 468999999999999999999999 99999999999888764
No 404
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.57 E-value=0.095 Score=49.48 Aligned_cols=34 Identities=21% Similarity=0.477 Sum_probs=31.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|||||..|+..|..|.+. |.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 46799999999999999999999 99999998653
No 405
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.54 E-value=0.19 Score=45.54 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=31.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. |++|+++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 4699999999999999999999 999999998754
No 406
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=91.49 E-value=0.0071 Score=66.23 Aligned_cols=53 Identities=15% Similarity=0.193 Sum_probs=34.9
Q ss_pred CCCCcccccccccccccccccCCeeEEEEee----cCce-eEEEEccCCCccCCcccccCCCCCe
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYEFIIE----KNKI-QHLQINAQNCIHCKTCDIKDPTQNI 545 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~~~~~----~~~~-~~~~~~~~~C~~Cg~C~~~cp~~~i 545 (561)
+.+.|+. |+.|+.+||.++. .... ..+. ..+..+.+.|+.||.|..+||.+++
T Consensus 413 ~~~~Ci~------CG~C~~~CP~~~~-~~~il~~~~~G~~~~~~~~~~~Ci~Cg~C~~vCP~ga~ 470 (807)
T 3cf4_A 413 MVAKCAD------CGACLLACPEEID-IPEAMGFAKKGDFSYFEEIHDTCIGCRRCEQVCKKEIP 470 (807)
T ss_dssp HHHHCCC------CCHHHHHCTTCCC-HHHHHHHHHTTCTHHHHHHHHHCCCCCHHHHHCTTCCC
T ss_pred hHHhCCC------CCchhhhCCCCCc-hHHHHHHHHcCChhhhhhchhhccchhhHHHhCCCCCC
Confidence 3466877 6789999999761 1000 0010 0123356789999999999999876
No 407
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.45 E-value=0.16 Score=49.26 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=31.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|.+.|..|++. |++|+++|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 4699999999999999999999 999999998754
No 408
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.35 E-value=0.2 Score=50.59 Aligned_cols=34 Identities=29% Similarity=0.363 Sum_probs=31.5
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
-.|+|||.|..|..+|..|.+. |++|+|+|+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 4699999999999999999999 999999998854
No 409
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.33 E-value=0.15 Score=51.33 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=31.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|+|+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 46899999999999999999999 999999998754
No 410
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.32 E-value=0.18 Score=48.66 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=31.9
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+...|.|||.|-.|.+.|..|++. |++|+++++.+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNPQ 41 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCHH
Confidence 345799999999999999999999 999999998753
No 411
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.28 E-value=0.19 Score=48.56 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=30.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
...|+|||||-.|.++|..|+.. |+ +|+++|..+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCc
Confidence 35799999999999999999999 86 999999864
No 412
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.24 E-value=0.18 Score=48.76 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=30.4
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
|..+|+|||+|-.|.+.|..|+ . |++|+++.|.+
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH
Confidence 3467999999999999999999 8 99999999875
No 413
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.24 E-value=0.18 Score=49.42 Aligned_cols=32 Identities=34% Similarity=0.413 Sum_probs=30.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~ 60 (561)
..|+|||+|-.|.+.|..|++. |++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh
Confidence 4799999999999999999999 9999999974
No 414
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.24 E-value=0.18 Score=50.52 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=31.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|+|+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 46899999999999999999999 999999998764
No 415
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.02 E-value=0.2 Score=51.02 Aligned_cols=36 Identities=14% Similarity=0.338 Sum_probs=33.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
...+.|||.|-.|+.+|..|++. |++|+++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH
Confidence 57899999999999999999999 9999999998753
No 416
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.94 E-value=0.3 Score=49.81 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|...|..|++. |++|+++|+.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHH
Confidence 4699999999999999999999 999999998865
No 417
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.81 E-value=0.2 Score=51.69 Aligned_cols=35 Identities=20% Similarity=0.416 Sum_probs=31.9
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|.|||+|-.|+.+|..|++. |++|+++|+.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCHH
Confidence 46799999999999999999999 999999998753
No 418
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.76 E-value=0.15 Score=50.56 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=30.2
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
.|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK------CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT------EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 799999999999999999999 99999999864
No 419
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.68 E-value=0.19 Score=51.49 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=32.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCc-EEEEcCCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIK-ICVLEKGSEL 63 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~-V~ViEk~~~~ 63 (561)
..+|+|||+|.+|+-+|..|++. +.+ |+|+++.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~------~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV------AKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT------SCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHH------hCCcEEEEeCCCCc
Confidence 46899999999999999999999 998 9999987643
No 420
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.67 E-value=0.2 Score=49.73 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|+|+|.+|+++|..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 6899999999999999999999 99999999864
No 421
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.67 E-value=0.31 Score=42.83 Aligned_cols=36 Identities=25% Similarity=0.171 Sum_probs=30.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.-.|+|+|+|..|..+|..|.+.. |++|+++|+.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-----GKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCHH
Confidence 457999999999999999997731 799999998753
No 422
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.61 E-value=0.087 Score=44.49 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|||+|..|.+.|..|++. |++|+|+++.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCH
Confidence 46799999999999999999888 99999999864
No 423
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.57 E-value=0.22 Score=46.48 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
...|+|||+|-.|..+|..|++. |+ +++|+|+...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCc
Confidence 47899999999999999999999 98 8999998754
No 424
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.56 E-value=0.22 Score=49.15 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=30.6
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|||+|-.|...|..|++. |++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5799999999999999999999 99999999864
No 425
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.53 E-value=0.24 Score=47.40 Aligned_cols=35 Identities=17% Similarity=0.340 Sum_probs=31.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+..|.|||+|..|...|..|+ . |++|+++|+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCHH
Confidence 3578999999999999999999 9 999999998753
No 426
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.50 E-value=0.2 Score=48.69 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=32.9
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGS 61 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~ 61 (561)
+|...|.|||.|-.|.++|..|++. | ++|+++++.+
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 3556899999999999999999999 9 9999999875
No 427
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.49 E-value=0.26 Score=47.62 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
...|.|||+|..|.++|+.|++. |+ +|+++|..+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccc
Confidence 35799999999999999999999 99 999999863
No 428
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.46 E-value=0.33 Score=46.85 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=32.3
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+...|.|||.|-.|...|..|++. |++|+++++.+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 346799999999999999999999 999999998753
No 429
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.34 E-value=0.28 Score=47.66 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=31.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
...|+|||+|-.|.++|..|+.. |+ +|+++|..+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCch
Confidence 35799999999999999999999 88 9999998764
No 430
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.30 E-value=0.23 Score=48.50 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=30.6
Q ss_pred ccEEEECchhHHHH-HHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLS-AAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa-~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||.|.+|++ +|..|+++ |++|++.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCC
Confidence 46999999999996 89999999 999999998764
No 431
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.23 E-value=0.26 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=30.5
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
...|+|||+|-.|.++|+.|+.. ++ +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 46899999999999999999998 87 899999865
No 432
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.14 E-value=0.25 Score=48.83 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.5
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
-.+..|+|+|||-||..+|..|... |. +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 3468999999999999999999999 99 999999863
No 433
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.04 E-value=0.28 Score=50.83 Aligned_cols=37 Identities=11% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
-|...|.|||.|..|.++|..|++. |++|+++++.+.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~ 44 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQS 44 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSH
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 4778999999999999999999999 999999998764
No 434
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.71 E-value=0.29 Score=47.20 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=29.8
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
.|+|||+|-.|.++|..|+.. |+ +|+++|..+
T Consensus 2 kI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCH
Confidence 599999999999999999999 98 999999864
No 435
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.57 E-value=0.31 Score=49.29 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=31.0
Q ss_pred CCCCCCCCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 14 KYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 14 ~~~~~~~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+++.+++....|.|||+|-.|+.+|..|+ . |++|+++|+.+.
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~~~ 69 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIA-Q------NHEVVALDIVQA 69 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHH-c------CCeEEEEecCHH
Confidence 44445666678999999999999999887 4 899999998754
No 436
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.46 E-value=0.23 Score=45.38 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=30.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEE-EcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICV-LEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~V-iEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. |++|++ +++.+.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHH
Confidence 5799999999999999999999 999999 887653
No 437
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.45 E-value=0.37 Score=46.64 Aligned_cols=37 Identities=32% Similarity=0.270 Sum_probs=32.6
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~ 62 (561)
.+...|.|||.|..|.+.|..|++. |+ +|+++++.+.
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDINPE 69 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSCHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECCHH
Confidence 3446899999999999999999999 99 9999998753
No 438
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.43 E-value=0.33 Score=45.14 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+...|.|||+|-.|.++|..|++. |++|+++++.+.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChh
Confidence 4457899999999999999999999 999999998754
No 439
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.39 E-value=0.37 Score=46.78 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=30.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
..|+|||||-.|.++|..|+.. |+ +|+++|..+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCH
Confidence 4799999999999999999999 88 999999865
No 440
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.39 E-value=0.26 Score=47.29 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=31.0
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|...|.|||+|..|...|..|++. |++|+++++.+.
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~~ 39 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNPE 39 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred ccceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 335799999999999999999999 999999998643
No 441
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.34 E-value=0.35 Score=46.78 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=29.9
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.|+|||+|-.|.++|..|++. ..+++|+++|+.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChh
Confidence 599999999999999999984 11789999998753
No 442
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.33 E-value=0.28 Score=50.38 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.1
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|...|..|++. |++|+++|+.+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV------GISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 4699999999999999999999 999999998753
No 443
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=89.24 E-value=0.012 Score=55.05 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=33.1
Q ss_pred CCCCcccccccccccccccccCCeeEE--EEe------------ec-Cc---eeE---E--EEccCCCccCCcccccCCC
Q psy14496 486 NKKIPIHINFSIYAGPEARYCPAGVYE--FII------------EK-NK---IQH---L--QINAQNCIHCKTCDIKDPT 542 (561)
Q Consensus 486 ~~~~c~~~~~~~~~~~c~~~CP~~~~~--~~~------------~~-~~---~~~---~--~~~~~~C~~Cg~C~~~cp~ 542 (561)
+.+.|+. |+.|+.+||..++. +.. +. .. ... + .....+|+.||.|..+||.
T Consensus 147 ~~~~Ci~------Cg~C~~~CP~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 220 (241)
T 2bs2_B 147 ELDRCIE------CGCCIAACGTKIMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPK 220 (241)
T ss_dssp HHHTCCC------CCHHHHTCHHHHHCTTCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhhc------cCcCcccCCCCccCCCCCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCC
Confidence 4467888 57899999998642 100 00 00 000 0 1245689999999999997
Q ss_pred C
Q psy14496 543 Q 543 (561)
Q Consensus 543 ~ 543 (561)
+
T Consensus 221 ~ 221 (241)
T 2bs2_B 221 N 221 (241)
T ss_dssp C
T ss_pred C
Confidence 5
No 444
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.21 E-value=0.31 Score=46.44 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||.|-.|...|..|++. |++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 3699999999999999999999 999999998765
No 445
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.20 E-value=0.37 Score=45.32 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=32.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|+|+|+|-+|.++|..|++. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ------GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 56899999999999999999999 999999998764
No 446
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.18 E-value=0.4 Score=46.42 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. |++|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 6799999999999999999999 999999998754
No 447
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.14 E-value=0.25 Score=45.48 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=30.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.-.|+|+|+|..|..+|..|.+. |+ |+++|+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS------EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC------Ce-EEEEECCHH
Confidence 45799999999999999999998 99 999998754
No 448
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.14 E-value=0.39 Score=46.69 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=30.3
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
...|+|||+|..|.++|+.|+.. |+ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecch
Confidence 35799999999999999999999 87 899999753
No 449
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=89.10 E-value=0.96 Score=48.14 Aligned_cols=57 Identities=11% Similarity=0.156 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHCCCEEEcCceEeEEEEcCC-CCEEEEEecccccccCCceecccccCeEEecCEEEEccC
Q psy14496 130 LSDLVRWMGKKAENMGIDIFSGFSASEILYDSK-NNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEG 201 (561)
Q Consensus 130 r~~l~~~L~~~a~~~gv~i~~g~~v~~i~~~~~-g~v~~V~~~~~~~~~~g~~~~~f~~g~~i~ad~vV~AdG 201 (561)
-+.|.+.|.+.++..|.+|+.+++|.+|..+++ +++++|.+. +|.+++||.||....
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~---------------~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQ---------------FGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEET---------------TSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeC---------------CCCEEEcCEEEEChh
Confidence 468999999999999999999999999987643 788888753 256899999987443
No 450
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.90 E-value=0.46 Score=44.48 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=31.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCC----CcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKE----IKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G----~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. | ++|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCcc
Confidence 4799999999999999999999 8 79999998765
No 451
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.61 E-value=0.6 Score=44.21 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.2
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|+|.|+|..|..++..|.+. |++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcc
Confidence 4699999999999999999999 999999998754
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.57 E-value=0.26 Score=47.38 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=29.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~ 63 (561)
.|...|.+||-|..|...|..|.+. |++|+++++.+..
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK 40 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHT------TCEEEEC------
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH
Confidence 4666799999999999999999999 9999999987654
No 453
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.55 E-value=0.36 Score=47.98 Aligned_cols=34 Identities=26% Similarity=0.440 Sum_probs=31.1
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 36799999999999999999999 99999999764
No 454
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.50 E-value=0.38 Score=47.43 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.9
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKG 60 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~ 60 (561)
-.+..|+|+|||-||..+|..|... |. +|+|+|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECC
Confidence 3468999999999999999999999 98 79999986
No 455
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.44 E-value=0.36 Score=48.04 Aligned_cols=34 Identities=9% Similarity=0.071 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCC-------CcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKE-------IKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G-------~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. | ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChh
Confidence 4799999999999999999999 8 99999998765
No 456
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.39 E-value=0.48 Score=45.12 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=30.5
Q ss_pred ccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|.|||+ |-.|.+.|..|++. |++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS------AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 47999999 99999999999999 99999999764
No 457
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.38 E-value=0.49 Score=45.87 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=30.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
..|+|||+|..|.++|..|+.. ++ +|+++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChH
Confidence 5799999999999999999998 77 9999998764
No 458
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.33 E-value=0.44 Score=43.21 Aligned_cols=33 Identities=30% Similarity=0.268 Sum_probs=30.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999999 99999999864
No 459
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.27 E-value=0.38 Score=47.93 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=31.2
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM------GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 46899999999999999999999 99999999864
No 460
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.26 E-value=0.4 Score=46.54 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=29.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
...|+|||+|-.|.+.|..|++. |++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA------GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC------CCeEEEE-EcH
Confidence 46799999999999999999999 9999999 653
No 461
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.15 E-value=0.52 Score=43.76 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=30.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC----cEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI----KICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~----~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. |+ +|+++++.+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHH
Confidence 5799999999999999999999 98 9999998643
No 462
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.14 E-value=0.32 Score=46.40 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=31.0
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.|.|||.|-.|.+.|..|++. |++|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 699999999999999999999 999999998765
No 463
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.13 E-value=0.43 Score=45.09 Aligned_cols=33 Identities=12% Similarity=0.378 Sum_probs=30.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|+|+|-+|.++|..|++. |.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 5799999999999999999999 99999998764
No 464
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.04 E-value=0.42 Score=45.84 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=30.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
..|+|+|+|.+|.++|..|++. |. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST------AAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 5799999999999999999999 98 999998864
No 465
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.04 E-value=0.47 Score=46.08 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=30.9
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCC----CcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKE----IKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G----~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. | ++|+++++.+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCcc
Confidence 4799999999999999999999 8 89999998753
No 466
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.02 E-value=0.39 Score=46.83 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=28.8
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEK 59 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk 59 (561)
.|.|||+|-.|.+.|..|++. |++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN------GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH------CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEEc
Confidence 589999999999999999999 999999998
No 467
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.00 E-value=0.41 Score=46.46 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=31.8
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
...|.|||.|-.|...|..|++. |++|+++++.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA------GYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhC------CCeEEEEcCCHH
Confidence 35799999999999999999999 999999998754
No 468
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.89 E-value=0.77 Score=44.80 Aligned_cols=57 Identities=12% Similarity=0.190 Sum_probs=41.1
Q ss_pred CcccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCCCC-CCceeecceeChhhHHhhcc
Q psy14496 21 IEYDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL-GAHILSGAIIDPRSIFELFP 83 (561)
Q Consensus 21 ~~~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~~-g~~~~~G~~~~~~~l~~l~~ 83 (561)
....|+|.|| |..|..++..|.+. |++|+++.+.+.. +-....+.+.++..+.+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIM 76 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHh
Confidence 4467999999 99999999999999 9999999987643 22334555556666555543
No 469
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.89 E-value=0.31 Score=49.14 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=28.4
Q ss_pred ccEEEECchhHHHHHHHHHHh-ccccCCCCCcEEEEcC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQ-LAIKKNKEIKICVLEK 59 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~-~~~~~~~G~~V~ViEk 59 (561)
..|+|||+|-.|.+.|..|++ . |++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeC
Confidence 479999999999999999987 7 999999983
No 470
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.81 E-value=0.49 Score=44.45 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=30.0
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCc-EEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIK-ICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~-V~ViEk~~ 61 (561)
..|.|||+|-.|.+.|..|++. |++ |+++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCH
Confidence 4799999999999999999999 999 89998764
No 471
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.75 E-value=0.36 Score=49.13 Aligned_cols=33 Identities=21% Similarity=0.147 Sum_probs=30.4
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.|.|||+|-.|+.+|..|++. |++|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 589999999999999999999 999999998643
No 472
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.65 E-value=0.55 Score=45.04 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=31.9
Q ss_pred CcccEEEEC-chhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVG-GGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVG-aGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|...|.||| +|-.|.+.|..|++. |++|+++++.+.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~ 56 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW 56 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc
Confidence 335799999 999999999999999 999999997653
No 473
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.60 E-value=9.5 Score=40.89 Aligned_cols=37 Identities=19% Similarity=0.094 Sum_probs=30.3
Q ss_pred CCEEEEecCCccCCCcccccchHHHHHHHHHHHHHHHHHh
Q psy14496 332 DGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKIC 371 (561)
Q Consensus 332 ~~v~lvGDAa~~~~P~~g~G~~~Ai~~a~~lA~~l~~~l~ 371 (561)
+|++++|++.+.. ...-++-|+.+|..+|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~---~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRN---YPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTT---STTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCC---CCcCHHHHHHHHHHHHHHHHHHcc
Confidence 6999999997643 234688999999999999988764
No 474
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=87.57 E-value=0.51 Score=48.58 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=31.3
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|..|...|..|++. |++|+++|+.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH------GHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEECCHH
Confidence 4799999999999999999999 999999998754
No 475
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.56 E-value=0.73 Score=41.82 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=30.9
Q ss_pred ccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|+|.|| |..|..++..|.+. |++|+++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcc
Confidence 46999996 99999999999999 999999998854
No 476
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.48 E-value=0.37 Score=47.51 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=31.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCC-------CcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKE-------IKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G-------~~V~ViEk~~~ 62 (561)
..|.|||+|-.|.+.|..|++. | ++|+++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChh
Confidence 4799999999999999999999 8 99999998765
No 477
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.43 E-value=0.79 Score=44.44 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=31.1
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
....|.|||+|..|.++|+.|+.. |+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK------DLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCH
Confidence 346899999999999999999999 87 899999854
No 478
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.38 E-value=0.49 Score=43.46 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCCCcccEEEECc-hhHHHHHHHHHHhccccCCCC-CcEEEEcCCCC
Q psy14496 18 RESIEYDVIIVGG-GPSGLSAAIRLKQLAIKKNKE-IKICVLEKGSE 62 (561)
Q Consensus 18 ~~~~~~dVvIVGa-GpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~~ 62 (561)
.++|...|+|.|| |-.|..+|..|++. | ++|+++.|.+.
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPA 59 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGG
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChh
Confidence 3444567999994 89999999999999 9 99999998754
No 479
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=87.28 E-value=0.82 Score=44.03 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=31.7
Q ss_pred CcccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|...|+|+|| |-.|..++..|.+. |++|+++.|.+.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~ 46 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNS 46 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 4457999997 99999999999999 999999998764
No 480
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.23 E-value=0.5 Score=45.83 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=29.7
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
.|+|||+|-.|.++|..|++. |+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCCh
Confidence 589999999999999999999 98 999999864
No 481
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.23 E-value=0.58 Score=45.32 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=30.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
...|+|||+|-.|.++|+.|+.. ++ ++.++|..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 46899999999999999999988 75 899999753
No 482
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.22 E-value=0.52 Score=45.07 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.5
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
.|+|||+|-.|.++|+.|++. ++ +|+++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCh
Confidence 599999999999999999999 88 899999865
No 483
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=87.21 E-value=0.77 Score=45.56 Aligned_cols=36 Identities=19% Similarity=0.061 Sum_probs=31.2
Q ss_pred CcccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|...|+|.|| |..|..++..|.+. |++|+++.|...
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~------g~~V~~~~r~~~ 63 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGK------GYEVHGLIRRSS 63 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCS
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHC------CCEEEEEecCCc
Confidence 4357999998 99999999999999 999999988754
No 484
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.99 E-value=0.54 Score=48.44 Aligned_cols=37 Identities=14% Similarity=0.259 Sum_probs=32.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
+.+.+|.|||+|-.|.++|..|++. |++|+++++.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHH
Confidence 4467899999999999999999999 999999998753
No 485
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.95 E-value=0.51 Score=45.61 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=30.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~ 61 (561)
..|.|||.|-.|.+.|..|++. |+ +|+++++.+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCC
Confidence 5799999999999999999999 99 999999863
No 486
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.94 E-value=0.47 Score=44.91 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=31.7
Q ss_pred CcccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 21 ~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
|...|+|.|||..|..++..|.+. |++|+++.|.+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~ 39 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPD 39 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChh
Confidence 345799999999999999999999 999999998753
No 487
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.86 E-value=0.6 Score=45.06 Aligned_cols=33 Identities=15% Similarity=0.403 Sum_probs=29.9
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGSE 62 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~~ 62 (561)
.|+|||+|..|.++|+.|++. ++ +++++|..+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchH
Confidence 589999999999999999998 87 8999998763
No 488
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.63 E-value=0.61 Score=46.00 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=32.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..+|.|||.|-.|..+|..|++. |++|+++++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 35799999999999999999999 999999998753
No 489
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.61 E-value=0.48 Score=44.84 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=31.6
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC-cEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI-KICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~-~V~ViEk~~~ 62 (561)
...|+|+|+|-+|.++|..|++. |. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI------VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHH
Confidence 35799999999999999999999 98 8999998754
No 490
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.59 E-value=1.2 Score=39.54 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=30.8
Q ss_pred ccEEEECc-hhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGG-GPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGa-GpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|+|.|| |-.|..++..|.+. |++|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChh
Confidence 46999999 99999999999999 999999998754
No 491
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.23 E-value=0.7 Score=47.46 Aligned_cols=34 Identities=12% Similarity=0.361 Sum_probs=31.8
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
.+|.|||.|-.|.++|..|++. |++|+++++.+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 5799999999999999999999 999999998864
No 492
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=86.14 E-value=0.62 Score=44.08 Aligned_cols=33 Identities=12% Similarity=0.287 Sum_probs=30.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|+|||+|-+|.+.|..|++. |.+|+|+++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 5799999999999999999999 99999999764
No 493
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.11 E-value=0.63 Score=41.90 Aligned_cols=32 Identities=31% Similarity=0.423 Sum_probs=29.5
Q ss_pred cEEEEC-chhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 24 DVIIVG-GGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 24 dVvIVG-aGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
.|+||| +|-.|.+.|..|++. |++|+++++.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL------GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 589999 999999999999999 99999999864
No 494
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.01 E-value=0.74 Score=44.65 Aligned_cols=32 Identities=31% Similarity=0.368 Sum_probs=29.4
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKG 60 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~ 60 (561)
..|+|||+|..|.++|+.|+.. ++ +++++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCC
Confidence 5799999999999999999998 87 89999985
No 495
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.88 E-value=0.8 Score=43.42 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=31.4
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC---cEEEEcCCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI---KICVLEKGSE 62 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~---~V~ViEk~~~ 62 (561)
...|.|||+|-.|.+.|..|++. |+ +|+++++.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHH
Confidence 35799999999999999999999 88 9999998754
No 496
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=85.88 E-value=0.68 Score=43.32 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=29.6
Q ss_pred cEEEECchhHHHHHHHHHHhccccCCCC-CcEEEEcCCC
Q psy14496 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKE-IKICVLEKGS 61 (561)
Q Consensus 24 dVvIVGaGpAGLa~A~~La~~~~~~~~G-~~V~ViEk~~ 61 (561)
.|.|||+|-.|.+.|..|++. | ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC------CCCeEEEECCCH
Confidence 589999999999999999999 9 9999999864
No 497
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.85 E-value=0.54 Score=45.12 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=31.1
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~~ 62 (561)
..|.|||+|-.|...|..|++. |++|+++++.+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCCHH
Confidence 3699999999999999999999 999999998753
No 498
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=85.85 E-value=0.81 Score=44.72 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=30.7
Q ss_pred ccEEEECchhHHHHHHHHHHhccccCCCCCcEEEEcCCC
Q psy14496 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61 (561)
Q Consensus 23 ~dVvIVGaGpAGLa~A~~La~~~~~~~~G~~V~ViEk~~ 61 (561)
..|.|||.|-.|.+.|..|++. |++|+++++.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999999 99999999875
No 499
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.80 E-value=0.8 Score=44.30 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=30.0
Q ss_pred cccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 22 ~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
...|+|||+|-.|.++|+.|+.. ++ +|+++|...
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCc
Confidence 46899999999999999999888 65 899999864
No 500
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.78 E-value=0.84 Score=44.35 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCcccEEEECchhHHHHHHHHHHhccccCCCCC--cEEEEcCCC
Q psy14496 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEI--KICVLEKGS 61 (561)
Q Consensus 20 ~~~~dVvIVGaGpAGLa~A~~La~~~~~~~~G~--~V~ViEk~~ 61 (561)
.....|+|||+|-.|.++|+.|+.. |+ +++++|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMK------DLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCCh
Confidence 3457899999999999999999998 87 899999753
Done!