RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14496
(561 letters)
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 168 bits (426), Expect = 1e-47
Identities = 101/207 (48%), Positives = 144/207 (69%), Gaps = 2/207 (0%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAA RLKQLA + K++++C++EK + +GAH LSGA +DPR+
Sbjct: 28 RFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA 87
Query: 78 IFELFPKEK-LNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRW 136
ELFP K NTPV E+RF L+ K +P + + NHGNY++ L LV W
Sbjct: 88 FEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVP-ILPGLPMNNHGNYVVRLGHLVSW 146
Query: 137 MGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYT 196
MG++AE +G++++ G++A+EIL+ +V GIATN+ GI K+G K F+ G+EL+AK T
Sbjct: 147 MGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVT 206
Query: 197 LFAEGSRGHLSKQIIKKFNLDNKKDPQ 223
+FAEG GHL+KQ+ KKF+L +PQ
Sbjct: 207 IFAEGCHGHLAKQLYKKFDLRANCEPQ 233
Score = 161 bits (409), Expect = 3e-45
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 310 RISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKK 369
+ A GG QS+P+ F GG IGC+ GFMNV +IKG HT++KSG L A+SIF +
Sbjct: 223 KFDLRANCEPQGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQ 282
Query: 370 ICSNNKFNKLIT-----YKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQIL 422
+ S N +K I Y+ + + SW++KELY RN +P+ G+Y GM+ GI +
Sbjct: 283 LTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWI 342
Query: 423 FSGKFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLT 460
F G P+TL + SD L+PA PI+YP PD +++
Sbjct: 343 FRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQIS 380
>d2gmha3 d.58.1.6 (A:483-584) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 102
Score = 150 bits (381), Expect = 2e-44
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 461 FDKLSSIYVSNINHDEDQPIHLILKNKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNK 519
FD LSS+ +S NH+ DQP HL LK+ +P++ N SIY GPE R+CPAGVYEF+ +E+
Sbjct: 1 FDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGD 60
Query: 520 IQHLQINAQNCIHCKTCDIKDPTQNIEWITPEGGSGTNYPNM 561
LQINAQNC+HCKTCDIKDP+QNI W+ PEGG G Y M
Sbjct: 61 GFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 102
>d2gmha2 d.16.1.8 (A:237-335) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 99
Score = 141 bits (356), Expect = 7e-41
Identities = 56/98 (57%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 224 TYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQ--ISIGYIISLDY 281
TY +G+KELW I+ K K G V HT+GWPLD TYGG FLYH+ + +++G+++ LDY
Sbjct: 1 TYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDY 60
Query: 282 KNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTIT 319
+NPYLSPF EFQR+K HP I L+GGKRI+YGAR +
Sbjct: 61 QNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALN 98
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 94.9 bits (235), Expect = 2e-22
Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 35/231 (15%)
Query: 5 SSLNHSLINKYGPR--ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSE 62
S ++ + +Y E DV++VG G +GLSAA + KN +++ ++E+
Sbjct: 14 SIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEI-----SKNPNVQVAIIEQSVS 68
Query: 63 LGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKN 122
G G + I L+++ +
Sbjct: 69 PGGGAWLGGQLFSAMIVRKPAHLFLDEIG-----------------------VAYDEQDT 105
Query: 123 HGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182
+ + M K + +F+ +A +++ N V G+ TN + + +
Sbjct: 106 YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQ 164
Query: 183 KNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELW 233
+ AK + + G G +K+ + G+K L
Sbjct: 165 SCMD-PNVMEAKIVVSSCGHDGPFGATGVKRL---KSIGMIDHVPGMKALD 211
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 87.7 bits (216), Expect = 1e-19
Identities = 46/354 (12%), Positives = 85/354 (24%), Gaps = 93/354 (26%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSI 78
+ DVIIVG G SGLSAA + + ++K+C++E G G + +
Sbjct: 47 KFAVSDVIIVGAGSSGLSAAYVIAK----NRPDLKVCIIESSVAPGGGSWLGGQLFSAMV 102
Query: 79 FELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMG 138
L + P +E ++ + + +
Sbjct: 103 MRKPAHLFLQE-LEIPYEDEG----------------------DYVVVKHAALFISTVLS 139
Query: 139 KKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLF 198
K + + +F+ +++ + N + + +
Sbjct: 140 KVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHG------------- 186
Query: 199 AEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTY 258
DP L + K G+++ T G
Sbjct: 187 -----------------TQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGH------- 222
Query: 259 GGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTI 318
G F + I L E I
Sbjct: 223 DGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAE----------------------HDVVI 260
Query: 319 TTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKG--IHTSIKSGILVADSIFKKI 370
+G + F G ++ G SG+ A+ I K
Sbjct: 261 HSGAYAGVD-----NMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 309
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 71.2 bits (173), Expect = 2e-14
Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 36/254 (14%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFE 80
+ YDVI++GGGPSGL AAI + + +L+KG++LG +
Sbjct: 1 MHYDVIVIGGGPSGLMAAIGAAEEG------ANVLLLDKGNKLGRKLAISGGGRCNVTNR 54
Query: 81 LFPKEKLNKL-FNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLS----DLVR 135
L E + + N + F +++ + + + +S +V
Sbjct: 55 LPLDEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVD 114
Query: 136 WMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKY 195
+ + +++G+ I + I Y+ + G L +
Sbjct: 115 ALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQT---------------GEVLETNH 158
Query: 196 TLFAEGSR------GHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK-KGLVIHT 248
+ A G + + + + +KE+ GL +
Sbjct: 159 VVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFGGGVSVKEINPKEMSSKFTNGL--YF 216
Query: 249 IGWPLDYKTYGGGF 262
G LD Y GG+
Sbjct: 217 CGEVLDIHGYTGGY 230
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 70.7 bits (171), Expect = 8e-14
Identities = 55/371 (14%), Positives = 95/371 (25%), Gaps = 48/371 (12%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS----GAIID--PRS 77
VI+VG G SG+SAA RL + I + +LE +G + G ++
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGIT-----DLLILEATDHIGGRMHKTNFAGINVELGANW 56
Query: 78 IFELFP------KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLS 131
+ + +N F +L+ + + S+
Sbjct: 57 VEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVE 116
Query: 132 DLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMEL 191
++ + G D S + + N K L
Sbjct: 117 EMGEKLSATLHASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSL 176
Query: 192 YAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGW 251
L G F D + + + K K +
Sbjct: 177 QNTVPLATFSDFGD-----DVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNK 231
Query: 252 PLDYKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRI 311
+ Y G + + + S DY S + L K
Sbjct: 232 VVREIKYSPGGVTVKTED----NSVYSADYVMVSASL---GVLQSDLIQFKPKLPTWKV- 283
Query: 312 SYGARTITTGGLQSLPEFIFD------GGAFIGCNAGFMNVSRIKG-IHTSIKSGILVAD 364
R I + + +D G + G G +H + SGI A+
Sbjct: 284 ----RAIYQFWPVGVNRYEYDQLRAPVGRVYF---TGEHTSEHYNGYVHGAYLSGIDSAE 336
Query: 365 SIF----KKIC 371
+ KK+C
Sbjct: 337 ILINCAQKKMC 347
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 63.8 bits (154), Expect = 9e-12
Identities = 24/206 (11%), Positives = 54/206 (26%), Gaps = 23/206 (11%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAI-IDPRSIF 79
++ V I+G GPSGL L + I +LE+ + A ++ +
Sbjct: 1 MKTQVAIIGAGPSGLLLGQLLHK------AGIDNVILERQTPDYVLGRIRAGVLEQGMVD 54
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGK 139
L ++ ++ E + + L + +++ R + +
Sbjct: 55 LLREAGVDRRMARDGLVHEGVEIAF---AGQRRRIDLKRLSGGKTVTVYGQTEVTRDLME 111
Query: 140 KAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFA 199
E G + + + + L Y
Sbjct: 112 AREACGATTVYQAAEVRLHDLQGERPYVTFERDGER-------------LRLDCDYIAGC 158
Query: 200 EGSRGHLSKQIIKKFNLDNKKDPQTY 225
+G G + I + +
Sbjct: 159 DGFHGISRQSIPAERMQHGRLFLAGD 184
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 62.3 bits (150), Expect = 4e-11
Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 18/206 (8%)
Query: 17 PRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAII--- 73
P E +E D++I+GGG SG AA A K +K+ ++EK + + ++ +
Sbjct: 16 PTEVVETDILIIGGGFSGCGAAYEAAYWA--KLGGLKVTLVEKAAVERSGAVAQGLSAIN 73
Query: 74 ---------DPRSIFELFPKEKLNKLF--NTPVIEERFLFLSSKKSYKIPSWILPICFKN 122
+ ++ E + + + + + + W LPI
Sbjct: 74 TYIDLTGRSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTP 133
Query: 123 HGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIK 182
G Y+ + G+ + + + E +Y+ + NN G +
Sbjct: 134 DGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVG 193
Query: 183 KNFQLGMELY--AKYTLFAEGSRGHL 206
+ + AK + A G L
Sbjct: 194 FSVREPKFYVFKAKAVILATGGATLL 219
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 59.1 bits (142), Expect = 2e-10
Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 22/252 (8%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL-SGAIIDPRSI 78
S + II+G G +GL A +L +L + V + G ++G IL SG +
Sbjct: 2 SQYSENIIIGAGAAGLFCAAQLAKLG------KSVTVFDNGKKIGRKILMSGGGFCNFTN 55
Query: 79 FELFPKEKLNKLF-NTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWM 137
E+ P L++ R+ +V +
Sbjct: 56 LEVTPAHYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEML 115
Query: 138 GKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTL 197
+ + G I S++ + N KN + + L
Sbjct: 116 KSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV---NSTQWQCKNLIVATGGLSMPGL 172
Query: 198 FAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPK----LHKKGLVIHTIGWPL 253
A +++Q P+ ++G + I+ K GL IG L
Sbjct: 173 GATPFGYQIAEQF-----GIPVIPPRAVTMGGVDTKVISSKTMESNQVSGLYF--IGEVL 225
Query: 254 DYKTYGGGFLYH 265
D + GG+ +
Sbjct: 226 DVTGWLGGYNFQ 237
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 60.1 bits (144), Expect = 2e-10
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 10/120 (8%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS----GAIIDPRSIF 79
+V +VGGG SGL+ A L+ + +LE + LG + + G +++
Sbjct: 2 NVAVVGGGISGLAVAHHLRS------RGTDAVLLESSARLGGAVGTHALAGYLVEQGPNS 55
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGK 139
L + L +E R + + SD++ +
Sbjct: 56 FLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGAR 115
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 57.8 bits (138), Expect = 1e-09
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAI-IDPRSI 78
DV+IVG GP+GL AA L + +K ++K+ +++K S + A + R++
Sbjct: 8 CDVLIVGAGPAGLMAARVLSEYVRQK-PDLKVRIIDKRSTKVYN--GQADGLQCRTL 61
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 55.8 bits (133), Expect = 4e-09
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
++ + D+ IVG G +GL AAI Q N KI ++ K + +H
Sbjct: 2 QTFQADLAIVGAGGAGLRAAIAAAQA----NPNAKIALISKVYPMRSH 45
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 55.4 bits (132), Expect = 5e-09
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 17 PRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
P + DV++VG G +G SAAI K+ ++EK +G +
Sbjct: 13 PHD--TVDVVVVGSGGAGFSAAISATDSG------AKVILIEKEPVIGGN 54
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 55.5 bits (132), Expect = 8e-09
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSI 78
DV++VGGG SG++AA L + + VLE +G + + +
Sbjct: 1 DVVVVGGGISGMAAAKLLHD------SGLNVVVLEARDRVGGRTYTLRNQKVKYV 49
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 53.6 bits (127), Expect = 2e-08
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFP 83
D++I G G GLS A+ L Q I K+ +LE SE+ G I P ++ L
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIG-----KVTLLESSSEIRPLG-VGINIQPAAVEALAE 56
Query: 84 KEKLNKLFNTPVIEERFLFLSS--KKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKA 141
L T + ++ + P + + ++ +
Sbjct: 57 LGLGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRE 116
Query: 142 ENMGIDIFSG 151
+ +G
Sbjct: 117 RLGQQAVRTG 126
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 53.8 bits (128), Expect = 2e-08
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 16 GPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
GP E V++VG G +G +A++ K+ + +++K G +
Sbjct: 15 GPSE--TTQVLVVGAGSAGFNASLAAKKAG------ANVILVDKAPFSGGN 57
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 53.6 bits (127), Expect = 3e-08
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 17 PRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPR 76
S V+IVG G +GLSAA L ++ VLE G + + +
Sbjct: 25 KATSNPKHVVIVGAGMAGLSAAYVLAG------AGHQVTVLEASERPGGRVRTYRNEEAG 78
Query: 77 SIFELFP 83
L P
Sbjct: 79 WYANLGP 85
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 53.1 bits (126), Expect = 4e-08
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 16 GPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
G +E+ DV+I+G G +GL+AA+ + K+ +LEK G +
Sbjct: 19 GVKET--TDVVIIGSGGAGLAAAVSARDAG------AKVILLEKEPIPGGN 61
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 52.1 bits (123), Expect = 7e-08
Identities = 34/291 (11%), Positives = 66/291 (22%), Gaps = 13/291 (4%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
+YDVI++G G + + L K K+ ++K G S + F+
Sbjct: 5 DYDVIVLGTGITECILSGLLS----VDGK--KVLHIDKQDHYGGEAASVTLSQLYEKFKQ 58
Query: 82 FPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKA 141
P K + + + K + I + + K
Sbjct: 59 NPISKEERESK-FGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQ 117
Query: 142 ENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEG 201
+ + A + I+ + G++L
Sbjct: 118 GKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYY 177
Query: 202 SRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGG 261
G + + Y L+ + + + L G
Sbjct: 178 KFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGE 237
Query: 262 FLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
G LD +P +E K K +
Sbjct: 238 LPQGFARLSAIYGGTYMLD------TPIDEVLYKKDTGKFEGVKTKLGTFK 282
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 52.1 bits (123), Expect = 8e-08
Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 12/169 (7%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS----GAIIDPRSIFE 80
V ++G G SGL+AA +LK + + V E + G + S G I D +
Sbjct: 4 VAVIGAGVSGLAAAYKLKI------HGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTM 57
Query: 81 LFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKK 140
+ + L ++ + E+ F S+ I N I + G K
Sbjct: 58 TESEGDVTFLIDSLGLREKQQFPLSQNKRYI--ARNGTPVLLPSNPIDLIKSNFLSTGSK 115
Query: 141 AENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGM 189
+ + I + DS +V G +FG + F G
Sbjct: 116 LQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGT 164
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 51.3 bits (121), Expect = 1e-07
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
+ +VGG SGL+AA+ L+ + + V E+ + + +G ++ P + L
Sbjct: 6 RIAVVGGSISGLTAALMLRD------AGVDVDVYERSPQPLSGFGTGIVVQPELVHYL 57
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 51.5 bits (122), Expect = 1e-07
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
DV+I+G G +GLS A+RL ++ VL KG
Sbjct: 7 SCDVLIIGSGAAGLSLALRLADQH-------QVIVLSKGPVTEGS 44
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 51.3 bits (121), Expect = 1e-07
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
+ D +++GGG +GL AA+ +Q K + VL +H
Sbjct: 2 KVQYCDSLVIGGGLAGLRAAVATQQ------KGLSTIVLSLIPVKRSH 43
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 49.8 bits (118), Expect = 2e-07
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67
+IE + ++VG GP G AAIR QL K+ ++EKG+ G +
Sbjct: 1 AIETETLVVGAGPGGYVAAIRAAQLG------QKVTIVEKGNLGGVCL 42
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 49.8 bits (117), Expect = 4e-07
Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 6/53 (11%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIID 74
EYDVI++G G + + + K+ +++ G S ++
Sbjct: 6 EYDVIVLGTGLTECILSGIMSV------NGKKVLHMDRNPYYGGESSSITPLE 52
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 49.2 bits (116), Expect = 4e-07
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFE 80
EYDV+++GGGP G SAA +K+ ++E+ LG L+ I +++
Sbjct: 6 EYDVVVLGGGPGGYSAAFAAADEG------LKVAIVERYKTLGGVCLNVGCIPSKALLH 58
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 49.9 bits (118), Expect = 4e-07
Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
E+D +++G G +G+ AA+++ Q +L K +H
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQSG------QTCALLSKVFPTRSH 45
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 49.9 bits (117), Expect = 5e-07
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS 69
VII+G G SGL+AA +L+ + + +LE +G + +
Sbjct: 7 KVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGGRVAT 46
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 47.9 bits (113), Expect = 7e-07
Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 19/130 (14%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
S E DV+I+GGGP G AAI+ QL K +EK LG L+ I +++
Sbjct: 1 SDENDVVIIGGGPGGYVAAIKAAQLG------FKTTCIEKRGALGGTCLNVGCIPSKALL 54
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGK 139
+ E + F + L + +L+ + + K
Sbjct: 55 H----------SSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFK 104
Query: 140 KAENMGIDIF 149
K +
Sbjct: 105 KN---KVTYV 111
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 48.7 bits (115), Expect = 8e-07
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64
E DV++VG G SGL A RL++L + V+E ++G
Sbjct: 7 EVDVLVVGAGFSGLYALYRLRELG------RSVHVIETAGDVG 43
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 48.9 bits (115), Expect = 9e-07
Identities = 22/154 (14%), Positives = 39/154 (25%), Gaps = 8/154 (5%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG----AHILSGAIIDPRSIFE 80
+ I+G GPSGL A L + ++ + E+ G + S
Sbjct: 7 IAIIGAGPSGLVTAKALL----AEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNP 62
Query: 81 LFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKK 140
+ E + PV + FK + +
Sbjct: 63 ILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIY 122
Query: 141 AENMGIDIFSGFSASEILYDSKNNVCGIATNNFG 174
A+ + I +I + V G
Sbjct: 123 AQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAG 156
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 47.7 bits (112), Expect = 9e-07
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
+++I+ ++I+GGGP G AAIR QL I ++E + G
Sbjct: 1 QQTIQTTLLIIGGGPGGYVAAIRAGQLG------IPTVLVEGQALGGTC 43
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 47.8 bits (112), Expect = 1e-06
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGA 71
S +DVI+VG G G++A +L + + +K +++ +
Sbjct: 1 STHFDVIVVGAGSMGMAAGYQLAK------QGVKTLLVDAFDPPHTNGSHHG 46
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 47.3 bits (111), Expect = 2e-06
Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 6/162 (3%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
S YD++++G G GL A L K ++ V++ G A+
Sbjct: 1 SRAYDLVVIGAGSGGLEAGWNAASLHKK-----RVAVIDLQKHHGPPH-YAALGGTCVNV 54
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGK 139
PK+ + N + + + ++D M
Sbjct: 55 GCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFA 114
Query: 140 KAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGII 181
E + G + + + ++ E I+
Sbjct: 115 DTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYIL 156
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase
{White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 48.1 bits (113), Expect = 2e-06
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
I+YDV+IVG GP G + A L K+ + + G
Sbjct: 3 IKYDVVIVGSGPIGCTYARELVG------AGYKVAMFDIG 36
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 47.6 bits (112), Expect = 2e-06
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
YD II GGG +GL+ A +L + N +IK+ V+EKG GAII+ + +
Sbjct: 24 TYDYIIAGGGLTGLTVAAKLTE-----NPKIKVLVIEKG---FYESNDGAIIEDPNAYGQ 75
Query: 82 FPKEKLNKLFNT-PVIEERFLFLSSKKSYKIPSWILPICFKNHGNY 126
+++ + T P+I R + + K + I +
Sbjct: 76 IFGTTVDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKV 121
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 47.0 bits (110), Expect = 2e-06
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAI 72
YD+I++GGG G++AA R + K+ ++EK G + G +
Sbjct: 2 YDLIVIGGGSGGMAAARRAARHN------AKVALVEKSRLGGTCVNVGCV 45
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 46.8 bits (110), Expect = 2e-06
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL 68
+DV+I+GGGP+G AAI+ QL +EK +LG L
Sbjct: 5 SHDVVIIGGGPAGYVAAIKAAQLG------FNTACVEKRGKLGGTCL 45
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 46.7 bits (110), Expect = 3e-06
Identities = 30/275 (10%), Positives = 73/275 (26%), Gaps = 23/275 (8%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPR-SIFELFP 83
++IVG G SG +L + K ++ ++++ +G + + + P
Sbjct: 5 ILIVGAGFSGAVIGRQLAE------KGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGP 58
Query: 84 KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAEN 143
+F+T + + + + I+L + ++ K
Sbjct: 59 -----HIFHTDNETVWNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSP 113
Query: 144 MGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSR 203
+ D + + G ++ +
Sbjct: 114 DEARALIAEKGDSTIADPQTF------EEEALRFIGKELYEAFFKGYTIKQWGMQPSELP 167
Query: 204 GHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGGG-F 262
+ K++ +FN D+ + K +T + K L I L +
Sbjct: 168 ASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQ---MIKSILNHENIKVDLQREFIVEERT 224
Query: 263 LYHMENNQISIGYIISLDYKN-PYLSPFEEFQRYK 296
Y + Y + ++Y
Sbjct: 225 HYDHVFYSGPLDAFYGYQYGRLRQMGEMALLEKYL 259
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 46.8 bits (110), Expect = 4e-06
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
+++G G G AA+RL Q I ++E G
Sbjct: 7 RVPALVIGSGYGGAVAALRLTQ------AGIPTQIVEMG 39
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 45.4 bits (106), Expect = 6e-06
Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
S +D++++G G GL AA L K ++ V++ G S ++
Sbjct: 1 SKIFDLVVIGAGSGGLEAAWNAATLYKK-----RVAVIDVQMVHGPPFFSALGGTCVNVG 55
Query: 80 ELFPKEKLNKLFNTPVIEERFLF-LSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMG 138
+ K + + E F ++ W I K+ +++++ M
Sbjct: 56 CVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKD--EAVLNINKSYDEM- 112
Query: 139 KKAENMGIDIFSGF 152
+ G++ F G+
Sbjct: 113 -FRDTEGLEFFLGW 125
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 46.4 bits (109), Expect = 6e-06
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
D II GGG +GL+ A RL + N I + V+E G G II+ + +
Sbjct: 17 TVDYIIAGGGLTGLTTAARLTE-----NPNISVLVIESG---SYESDRGPIIEDLNAYGD 68
Query: 82 FPKEKLNKLFNTP 94
++ + T
Sbjct: 69 IFGSSVDHAYETV 81
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 45.9 bits (108), Expect = 6e-06
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILS----GAIIDPRSI 78
YD IIVG G G A LK+ K+ V+EK + +G + + G I
Sbjct: 2 YDYIIVGSGLFGAVCANELKK------LNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGA 55
Query: 79 FELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNY 126
+K + ++E S YK + LP
Sbjct: 56 HIFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQM 103
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 45.1 bits (105), Expect = 7e-06
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64
S ++D+II+GGG GL+AA + K+ VL+ +
Sbjct: 1 SYDFDLIIIGGGSGGLAAAKEAAKFD------KKVMVLDFVTPTP 39
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 45.0 bits (105), Expect = 7e-06
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
S ++DVI++G GP G AAI+ QL +K ++EK G
Sbjct: 1 SQKFDVIVIGAGPGGYVAAIKSAQLG------LKTALIEKYKGKEGKTALGGTCLNVGCI 54
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGK 139
+ F+ + +S+ + + +P + +L+ V +
Sbjct: 55 PSKALLDSSYKFHEAHESFKLHGISTGE----VAIDVPTMIARKDQIVRNLTGGVASL-- 108
Query: 140 KAENMGIDIFSGF 152
+ G+ +F G
Sbjct: 109 -IKANGVTLFEGH 120
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 45.4 bits (106), Expect = 1e-05
Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
+++G G +A+RL + ++ +LE G
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE------AGVQTLMLEMG 34
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 44.1 bits (103), Expect = 1e-05
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
+ +VG GP+G A L +K + + + EK + G D +
Sbjct: 4 ICVVGSGPAGFYTAQHL----LKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVK 54
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 43.7 bits (102), Expect = 2e-05
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67
YD +++GGG GL++A R +L + V+E G +
Sbjct: 3 SYDYLVIGGGSGGLASARRAAELG------ARAAVVESHKLGGTCV 42
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 43.4 bits (101), Expect = 2e-05
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHIL 68
YD I +GGG G+++ R K ++E G +
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMYG------QKCALIEAKELGGTCVN 42
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase
FprA {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 43.5 bits (101), Expect = 3e-05
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIK-KNKEIKICVLEKGSELGAHILSGAIIDPRSIFE 80
Y + IVG GPS AA L + A ++ ++ + +LE + SG D I
Sbjct: 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKS 61
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 43.4 bits (101), Expect = 3e-05
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 12 INKYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64
+++ PRE YD I +GGG +G + L+ + + ++++ LG
Sbjct: 35 VDENDPRE---YDAIFIGGGAAGRFGSAYLRAM------GGRQLIVDRWPFLG 78
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 43.6 bits (101), Expect = 3e-05
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
Y+ +++GGG G + A L + + + E G +G
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAK------ENKNTALFESG-TMGGR 41
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 42.8 bits (99), Expect = 3e-05
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIK 47
YDV+IVG GP+G +AAI + I+
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGIR 26
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 43.1 bits (100), Expect = 3e-05
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAI 72
++I+GGGP+G AA+ + ++ V++ GA +L +
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPET---TQVTVIDCDGIGGAAVLDDCV 48
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 42.6 bits (99), Expect = 3e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIK 47
E+ + IVG GP+ +AAI + +K
Sbjct: 2 ETHNTRLCIVGSGPAAHTAAIYAARAELK 30
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 43.6 bits (101), Expect = 4e-05
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
++I+G G G + A L I VL++G
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWN-----NITVLDQG 34
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 42.7 bits (99), Expect = 7e-05
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
YD IIVG GP G+ AA RL + K+ +LE+G G + P +
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSE------AGKKVLLLERGGP-STKQTGGTYVAPWATSSG 54
Query: 82 FPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNY 126
K + LF + + + + + N Y
Sbjct: 55 LTKFDIPGLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVNGALY 99
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 41.0 bits (95), Expect = 1e-04
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
++I+G GP+G +AA+ + ++ ++ + G + + +
Sbjct: 6 SKLLILGSGPAGYTAAVYAAR------ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDL 59
Query: 83 PKEKLNKLFNTPVIE 97
L + + +
Sbjct: 60 TGPLLMERMHEHATK 74
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 41.8 bits (97), Expect = 1e-04
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61
YD +IVGGG SG A L + + K+ VLE+GS
Sbjct: 26 SYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGS 58
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 41.2 bits (96), Expect = 2e-04
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIK 47
Y V+IVG G SG A L Q ++
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGVR 27
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 38.2 bits (87), Expect = 0.001
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHI 67
E+ + ++G GP+ +S A L +L I + EK +G
Sbjct: 1 EAYSAKIALLGAGPASISCASFLARLGYS-----DITIFEKQEYVGGLS 44
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 38.1 bits (87), Expect = 0.002
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
+ V+++G G GLS+A+ L + K + +L +
Sbjct: 6 QKRVVVLGSGVIGLSSALILAR------KGYSVHILARD 38
>d1vjwa_ d.58.1.4 (A:) Ferredoxin A {Thermotoga maritima [TaxId:
2336]}
Length = 59
Score = 34.9 bits (79), Expect = 0.002
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 3/60 (5%)
Query: 488 KIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEW 547
K+ + + I G CP F + + + + K PT I
Sbjct: 2 KVRVDADACIGCGVCENLCPDV---FQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISV 58
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 37.1 bits (84), Expect = 0.003
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63
VI++G G A L L + + +I EKG +
Sbjct: 3 VIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFI 37
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 37.4 bits (85), Expect = 0.003
Identities = 7/42 (16%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63
+++GGG + +AA ++ + ++ ++ + EL
Sbjct: 4 HVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPEL 41
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 36.0 bits (82), Expect = 0.009
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG-SELGAHILSGAIIDPRSIFELFP 83
V+++G G GLS A+ + + + + + V + ++ + P + P
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNP 62
Query: 84 KEK 86
+E
Sbjct: 63 QEA 65
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 35.2 bits (79), Expect = 0.010
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKG 60
V++VGGG G +AA +K + I++ ++E
Sbjct: 5 VVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPN 36
>d1bc6a_ d.58.1.2 (A:) Ferredoxin {Bacillus schlegelii [TaxId:
1484]}
Length = 77
Score = 32.4 bits (73), Expect = 0.017
Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 7/52 (13%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI--EWITPEG 552
CP ++ I+ CI C C+ P I E PE
Sbjct: 17 VEVCPVDCIHEGEDQ-----YYIDPDVCIDCGACEAVCPVSAIYHEDFVPEE 63
>d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 149
Score = 33.7 bits (76), Expect = 0.022
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITP 550
CP + ++K K++ C C +C P I+
Sbjct: 21 EYICPNDL--MTLDKEKMKAYNREPDMCWECYSCVKMCPQGAIDVRGY 66
>d1xera_ d.58.1.3 (A:) Ferredoxin {Archaeon Sulfolobus sp. [TaxId:
2288]}
Length = 103
Score = 31.7 bits (71), Expect = 0.051
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Query: 503 ARYCPAGVYEFIIEKNKIQH----LQINAQNCIHCKTCDIKDPTQNIEWITP 550
CP V+++ +N Q CI C C P I+ P
Sbjct: 52 INACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP 103
Score = 28.6 bits (63), Expect = 0.69
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 9/61 (14%)
Query: 492 HINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITPE 551
H +Y GP G++ I+ ++ CI +C P +W
Sbjct: 16 HSGHKVY-GPVEPPKVLGIHGTIVG--------VDFDLCIADGSCINACPVNVFQWYDTP 66
Query: 552 G 552
G
Sbjct: 67 G 67
>d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC
{Synechococcus elongatus [TaxId: 32046]}
Length = 80
Score = 30.9 bits (69), Expect = 0.062
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Query: 503 ARYCPAGVYEFIIEKNKI---QHLQINAQNCIHCKTCDIKDPTQNIE 546
R CP V E + ++C+ CK C+ PT +
Sbjct: 17 VRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLS 63
Score = 27.4 bits (60), Expect = 1.1
Identities = 9/38 (23%), Positives = 12/38 (31%)
Query: 522 HLQINAQNCIHCKTCDIKDPTQNIEWITPEGGSGTNYP 559
H CI C C PT +E + +G
Sbjct: 2 HTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIA 39
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 32.4 bits (72), Expect = 0.083
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIK 47
V+++G G + +S L+Q +
Sbjct: 6 VVVLGAGLASVSFVAELRQAGYQ 28
>d2ieaa3 c.48.1.1 (A:701-886) Pyruvate dehydrogenase E1 component,
C-domain {Escherichia coli [TaxId: 562]}
Length = 186
Score = 32.4 bits (73), Expect = 0.085
Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 35/193 (18%)
Query: 44 LAIKKNKEIKICVLEKGSELGA------HILSGAIIDPRSIFELFPKEKLNKLFNTPVIE 97
L + + K+ +L GS L + + ++ + +L +
Sbjct: 16 LETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSD-VYSVTSFTELARDGQDCERW 74
Query: 98 ERFLFLSSKKSYKI--PSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSAS 155
L + + I P + + +G D F G S S
Sbjct: 75 NMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGF-GRSDS 133
Query: 156 -EILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEG--SRGHLSKQIIK 212
E L +F ++ ++ A L G + + I
Sbjct: 134 RENLRH-----------HFEVDASYVVV---------AALGELAKRGEIDKKVV-ADAIA 172
Query: 213 KFNLD-NKKDPQT 224
KFN+D +K +P+
Sbjct: 173 KFNIDADKVNPRL 185
>d2ha9a1 c.7.1.5 (A:1-440) Uncharacterized protein SP0239
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 440
Score = 32.4 bits (74), Expect = 0.12
Identities = 26/109 (23%), Positives = 35/109 (32%), Gaps = 27/109 (24%)
Query: 117 PICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSA-----------------SEILY 159
PI L + + K A+ +G+D GFSA L
Sbjct: 79 PISLIGAATDATDYVVLAKALDKAAKEIGVDFIGGFSALVQKGYQKGDEILINSIPRAL- 137
Query: 160 DSKNNVCG---IATNNFGINKEG------IIKKNFQLGMELYAKYTLFA 199
+ VC I + GIN IIK+ L AK +FA
Sbjct: 138 AETDKVCSSVNIGSTKSGINMTAVADMGRIIKETANLSDMGVAKLVVFA 186
>d1hfel2 d.58.1.5 (L:2-86) Fe-only hydrogenase larger subunit,
N-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Length = 85
Score = 30.0 bits (67), Expect = 0.15
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI 545
++YCP I + H + + CI+C C P I
Sbjct: 41 SQYCPTAA---IFGEMGEPHSIPHIEACINCGQCLTHCPENAI 80
Score = 28.1 bits (62), Expect = 0.72
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 516 EKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITPEGGSGTNYPN 560
+ +K+ +QI+ CI C TC PT I + +
Sbjct: 20 DPDKLHFVQIDEAKCIGCDTCSQYCPTAAI-FGEMGEPHSIPHIE 63
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 31.3 bits (69), Expect = 0.20
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIK 47
+V+IVG G +G+ A L+ +
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGWE 28
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.9 bits (69), Expect = 0.26
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
+ +VG GP+GL+ AI + ++ + + SE+G I + F
Sbjct: 46 LAVVGAGPAGLAFAINAAA------RGHQVTLFDAHSEIGGQFNIAKQIPGKEEF 94
>d2fdna_ d.58.1.1 (A:) Ferredoxin II {Clostridium acidurici [TaxId:
1556]}
Length = 55
Score = 28.4 bits (63), Expect = 0.30
Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 5/43 (11%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI 545
CP I ++ I+A CI C C P
Sbjct: 15 EPECPVNA----ISSGDDRY-VIDADTCIDCGACAGVCPVDAP 52
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 30.5 bits (67), Expect = 0.34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 25 VIIVGGGPSGLSAAIRLKQLA 45
V+IVG GP G A +L Q
Sbjct: 3 VVIVGNGPGGFELAKQLSQTY 23
>d1fxra_ d.58.1.4 (A:) Ferredoxin I {Sulfate-reducing bacteria
(Desulfovibrio africanus) [TaxId: 873]}
Length = 64
Score = 26.7 bits (58), Expect = 1.3
Identities = 7/46 (15%), Positives = 11/46 (23%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWI 548
G + E K + + + P Q I W
Sbjct: 17 CVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWE 62
>d1vcca_ d.121.1.1 (A:) Vaccinia DNA topoisomerase I, 9 kDa
N-terminal fragment {Vaccinia virus, strain WR [TaxId:
10245]}
Length = 77
Score = 27.1 bits (60), Expect = 1.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 456 DNKLTFDKLSSIYVSNINHDEDQPIHLILKNKKIPIHIN 494
D KL D VS +D P + +L++ KIP H+
Sbjct: 8 DGKLFTDNNFLNPVS-----DDNPAYEVLQHVKIPTHLT 41
>d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 173
Score = 28.2 bits (62), Expect = 1.6
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 525 INAQNCIHCKTCDIKDPTQNIEWITPEGG 553
I+ + CI+C C + + I +
Sbjct: 104 IDEEMCINCGKCYMTCNDSGYQAIQFDPE 132
Score = 27.4 bits (60), Expect = 3.6
Identities = 12/57 (21%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 481 HLILKNKKIP-IHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTC 536
L + + I I G C Y I+ + HL C C C
Sbjct: 93 ELSNIEQVVAVIDEEMCINCGKCYMTCNDSGY-QAIQFDPETHLPTVTDTCTGCTLC 148
>d1dura_ d.58.1.1 (A:) Ferredoxin II {Peptostreptococcus
asaccharolyticus [TaxId: 1258]}
Length = 55
Score = 26.1 bits (57), Expect = 1.7
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 6/44 (13%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIE 546
CP + + I+A +CI C +C P
Sbjct: 15 KPECPVNCIQ------EGSIYAIDADSCIDCGSCASVCPVGAPN 52
>d1h98a_ d.58.1.2 (A:) Ferredoxin {Thermus thermophilus [TaxId:
274]}
Length = 77
Score = 26.6 bits (58), Expect = 2.4
Identities = 13/52 (25%), Positives = 16/52 (30%), Gaps = 7/52 (13%)
Query: 503 ARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNI--EWITPEG 552
CP I + I+ + CI C C P I E PE
Sbjct: 17 VEVCPVE---CIYDGG--DQFYIHPEECIDCGACVPACPVNAIYPEEDVPEQ 63
>d2c42a5 d.58.1.5 (A:669-785) Pyruvate-ferredoxin oxidoreductase,
PFOR, domain V {Desulfovibrio africanus [TaxId: 873]}
Length = 117
Score = 26.4 bits (57), Expect = 4.3
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 516 EKNKIQHL--QINAQNCIHCKTCDIKDPTQNIEWIT 549
EK + Q +NCI C C P I +
Sbjct: 5 EKRGVAINVPQWVPENCIQCNQCAFVCPHSAILPVL 40
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon
Thermococcus litoralis [TaxId: 2265]}
Length = 467
Score = 27.5 bits (61), Expect = 4.7
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 12/60 (20%)
Query: 275 YIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGG 334
+I + D N + EF+ + I+ GLQ L E+ DG
Sbjct: 206 FIANADDYNARVYMRREFREGF------------EEITRNVELAIISGLQVLKEYYPDGT 253
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 26.7 bits (58), Expect = 5.0
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFPK 84
+ I+GGG G A L + A E+ IL + + E +
Sbjct: 40 ITIIGGGFLGSELACALGRKARALGTEVIQL--FPEKGNMGKILPEYLSNW--TMEKVRR 95
Query: 85 EKLNKLFNTPVIE 97
E + + N V
Sbjct: 96 EGVKVMPNAIVQS 108
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine
dehydrogenase, middle domain {Methylophilus
methylotrophus, w3a1 [TaxId: 17]}
Length = 233
Score = 26.3 bits (56), Expect = 8.2
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 17 PRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
+ + V+IVG GPSG AA L + + + + ++G H
Sbjct: 44 RQTKNKDSVLIVGAGPSGSEAARVLME------SGYTVHLTDTAEKIGGH 87
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 132
Score = 25.6 bits (55), Expect = 8.7
Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 8/111 (7%)
Query: 25 VIIVGGGPSGLSAAIRLKQLAIK-----KNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
+II G G G + A L + +K+I + A +++G +++
Sbjct: 3 IIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID---ALVINGDCTKIKTLE 59
Query: 80 ELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISL 130
+ ++ + T E + KSY I I I + + L
Sbjct: 60 DAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERL 110
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.140 0.424
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,240,451
Number of extensions: 113878
Number of successful extensions: 484
Number of sequences better than 10.0: 1
Number of HSP's gapped: 475
Number of HSP's successfully gapped: 104
Length of query: 561
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 471
Effective length of database: 1,171,896
Effective search space: 551963016
Effective search space used: 551963016
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)