BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14497
(561 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1
Length = 551
Score = 610 bits (1573), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/549 (53%), Positives = 394/549 (71%), Gaps = 5/549 (0%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
RE +E+DV+IVG GP+GLSAA RLKQ A + +EI +CV+EKGSE+GAHILSGA+ +PR+
Sbjct: 3 REYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEPRA 62
Query: 78 IFELFPKEK-LNKLFNTPVI-EERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVR 135
+ ELFP K L NTPV ++ ++ S++ + K+P++ +P N GNYIISL +L R
Sbjct: 63 LNELFPDWKELGAPLNTPVTGDDIYVLKSAESATKVPNFFVPKTMHNEGNYIISLGNLCR 122
Query: 136 WMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQL-GMELYAK 194
W+ ++AE +G++I+ GF+A E L D V GI T + G+++EG K+ + GMEL AK
Sbjct: 123 WLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTPGMELRAK 182
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
YTLFAEG RGH+ KQ+IKK+NLD++ D Q Y +GIKE+W I+P HK GLV+HT GWPL+
Sbjct: 183 YTLFAEGCRGHIGKQLIKKYNLDSEADAQHYGIGIKEIWDIDPSKHKPGLVVHTAGWPLN 242
Query: 255 YKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYG 314
+ GG FLYH+ENNQ+ +G II L Y NP+LSPF+EFQRYK HP + + L+GGKR++YG
Sbjct: 243 DENTGGSFLYHLENNQVFVGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYLEGGKRVAYG 302
Query: 315 ARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNN 374
AR I GGL SLP+ +F GGA IGC+ G +N ++IKG HT++KSG+L AD+I + + +
Sbjct: 303 ARAICKGGLNSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADAIAEALAAGR 362
Query: 375 K-FNKLITYKTSFQASWLYKELYKARNFKPAMKK-GLYIGMLIIGIDQILFSGKFPFTLH 432
+ ++L +Y +F+ASWLY EL+++RNF A+ K G G IDQ +F GK P TLH
Sbjct: 363 EGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIFGGKIPVTLH 422
Query: 433 NINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILKNKKIPIH 492
+ DY L+ AS+ I YP PD KL+FDKLSS+++SN NH+EDQPIHL L + IPI
Sbjct: 423 DDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLKLADASIPIE 482
Query: 493 INFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITPEG 552
N +Y P RYCPAGVYE + + + QINAQNC+HCKTCDIKDP QNI W+ PEG
Sbjct: 483 KNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEG 542
Query: 553 GSGTNYPNM 561
G NYPNM
Sbjct: 543 TGGPNYPNM 551
>sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1
Length = 617
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 292/557 (52%), Positives = 395/557 (70%), Gaps = 16/557 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAA RLKQLA + K+I++C++EK +++GAH LSGA +DPR+
Sbjct: 64 RFAEEADVVIVGAGPAGLSAAARLKQLAAQHEKDIRVCLVEKAAQIGAHTLSGACLDPRA 123
Query: 78 IFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLV 134
+ ELFP KEK L NTPV E+RF L+ K Y+IP ILP + NHGNYI+ L LV
Sbjct: 124 LQELFPDWKEKGAPL-NTPVTEDRFGILTEK--YRIPVPILPGLPMNNHGNYIVRLGHLV 180
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
WMG++AE +G++++ G++A+E+L+ +V GIATN+ GI K+G K F+ G+EL+AK
Sbjct: 181 SWMGEQAEALGVEVYPGYAAAEVLFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 240
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG GHL+KQ+ +KF+L +PQTY +G+KELW I+ K K G V HT+GWPLD
Sbjct: 241 VTIFAEGCHGHLAKQLYRKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 300
Query: 255 YKTYGGGFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
TYGG FLYH+ + +++G+++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+
Sbjct: 301 RHTYGGSFLYHLNEGEPLVALGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTLEGGKRIA 360
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GGLQ +P+ F GG IGC+ GFMNV +IKG HT++KSGIL A+SIF ++ +
Sbjct: 361 YGARALNEGGLQCIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTN 420
Query: 373 NNKFNKLI-----TYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSG 425
N +K I Y+ + + SW++KELY RN +P+ G+Y GM+ GI +F G
Sbjct: 421 ENLQSKTIGLDVTEYEDNLKKSWVWKELYAVRNIRPSCHSILGVYGGMIYTGIFYWIFRG 480
Query: 426 KFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILK 485
P+TL + SD L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL LK
Sbjct: 481 MEPWTLKHKGSDSDKLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLK 540
Query: 486 NKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQN 544
+ +P++ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QN
Sbjct: 541 DDSVPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQN 600
Query: 545 IEWITPEGGSGTNYPNM 561
I W+ PEGG G Y M
Sbjct: 601 INWVVPEGGGGPAYNGM 617
>sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Acinetobacter sp. (strain ADP1) GN=etfD PE=4 SV=1
Length = 570
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/567 (52%), Positives = 393/567 (69%), Gaps = 25/567 (4%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKN-KEIKICVLEKGSELGAHILSGAIIDPR 76
RE++E+DV+IVG GP+GLSAAI+++QLAI+ N ++ +CV+EKGSE+GAHILSGA+++PR
Sbjct: 6 REAMEFDVVIVGAGPAGLSAAIKIRQLAIENNLPDLSVCVVEKGSEVGAHILSGAVLEPR 65
Query: 77 SIFELFPKEKLNKL-FNTPVIEERFLFL-SSKKSYKIPSWILPICFKNHGNYIISLSDLV 134
+I ELFP K N PV E++ FL S +KS + P W++P N GNY+ISL ++V
Sbjct: 66 AINELFPNWKEEGAPLNVPVTEDKTYFLMSDEKSQEAPHWMVPKTMHNDGNYVISLGNVV 125
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
RW+G+KAE + + IF GF+A+EILY + V GI T + GI K+G NF G EL+AK
Sbjct: 126 RWLGQKAEELEVSIFPGFAAAEILYHADGTVKGIQTGDMGIGKDGEPTHNFAPGYELHAK 185
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPL- 253
YTLFAEG RGHL K++I KFNLD DPQ Y +GIKELW I+P HK GLV+H GWPL
Sbjct: 186 YTLFAEGCRGHLGKRLINKFNLDQDADPQHYGIGIKELWEIDPAKHKPGLVMHGSGWPLS 245
Query: 254 DYKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISY 313
+ + GG +LYH ENNQ+++G I+ L Y+NP++ PF E QR+KTHP I + L+GGKRISY
Sbjct: 246 ETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMFPFMEMQRWKTHPLIKQYLEGGKRISY 305
Query: 314 GARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKIC-- 371
GAR + GGL SLP+ F GG IG +AGF+N ++IKG HT++KSG+L +++F+ I
Sbjct: 306 GARAVVKGGLNSLPKLTFPGGCLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAVFEAIARG 365
Query: 372 --------------SNNKFNK-LITYKTSFQASWLYKELYKARNFKPAMKK-GLYIGMLI 415
+ F+K L TY F SWL +EL+++RNF PAM K GL+IG
Sbjct: 366 VDKGGDLAIARVVEGEDLFDKELTTYTQKFDKSWLKEELHRSRNFGPAMHKFGLWIGGAF 425
Query: 416 IGIDQILFSGKFPFTLHNINSDYTYLEPASKH-IPIKYPNPDNKLTFDKLSSIYVSNINH 474
+DQ +F K PFTLH++ DY+ L+ + YP PD KLTFD+LSS++VSN H
Sbjct: 426 NFVDQNIF--KVPFTLHDLQPDYSALKTQDQATFKPNYPKPDGKLTFDRLSSVFVSNTVH 483
Query: 475 DEDQPIHLILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCK 534
+E+QP HL L + IP+ +N + P RYCPAGVYE + E + QINA NC+HCK
Sbjct: 484 EENQPSHLKLTDASIPVAVNLPRWDEPAQRYCPAGVYEIVDEGEGNKRFQINAANCVHCK 543
Query: 535 TCDIKDPTQNIEWITPEGGSGTNYPNM 561
TCDIKDP+QNI W+TPEGG G NYPNM
Sbjct: 544 TCDIKDPSQNITWVTPEGGGGPNYPNM 570
>sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1
Length = 616
Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/557 (52%), Positives = 394/557 (70%), Gaps = 16/557 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAAIRLKQLA ++ K+I++C++EK +++GAH LSGA +DP +
Sbjct: 63 RFAEEADVVIVGAGPAGLSAAIRLKQLAAEQGKDIRVCLVEKAAQIGAHTLSGACLDPAA 122
Query: 78 IFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLV 134
ELFP KEK L NTPV E+RF L+ K ++IP ILP + NHGNYI+ L LV
Sbjct: 123 FKELFPDWKEKGAPL-NTPVTEDRFAILTEK--HRIPVPILPGLPMNNHGNYIVRLGHLV 179
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
WMG++AE +G++++ G++A+E+LY +V GIATN+ GI K+G K F+ G+EL+AK
Sbjct: 180 SWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 239
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG GHL+KQ+ KKF+L D QTY +G+KELW I+ K K G V HT+GWPLD
Sbjct: 240 VTVFAEGCHGHLAKQLYKKFDLRASCDAQTYGIGLKELWIIDEKKWKPGRVDHTVGWPLD 299
Query: 255 YKTYGGGFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
TYGG FLYH+ + +++G+++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+
Sbjct: 300 RHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTLEGGKRIA 359
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GGLQS+P+ F GG IGC+ GFMNV +IKG HT++KSG L A+SIFK++ S
Sbjct: 360 YGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAESIFKQLTS 419
Query: 373 NNKFNK-----LITYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSG 425
N +K + Y+ + + SW++KEL+ RN +P+ G+Y GM+ GI + G
Sbjct: 420 ENLQSKTTGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGIFYWILRG 479
Query: 426 KFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILK 485
P+TL + SD L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL LK
Sbjct: 480 MEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLK 539
Query: 486 NKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQN 544
+ IP++ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QN
Sbjct: 540 DDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQN 599
Query: 545 IEWITPEGGSGTNYPNM 561
I W+ PEGG G Y M
Sbjct: 600 INWVVPEGGGGPAYNGM 616
>sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2
Length = 617
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/557 (52%), Positives = 393/557 (70%), Gaps = 16/557 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAA+RLKQLA+ K+I++C++EK +++GAH LSGA +DP +
Sbjct: 64 RFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGA 123
Query: 78 IFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLV 134
ELFP KEK L NTPV E+RF L+ K Y+IP ILP + NHGNYI+ L LV
Sbjct: 124 FKELFPDWKEKGAPL-NTPVTEDRFGILTEK--YRIPVPILPGLPMNNHGNYIVRLGHLV 180
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
WMG++AE +G++++ G++A+E+L+ +V GIATN+ GI K+G K F+ G+EL+AK
Sbjct: 181 SWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAK 240
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG GHL+KQ+ KKF+L +PQTY +G+KELW I+ K K G V HT+GWPLD
Sbjct: 241 VTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLD 300
Query: 255 YKTYGGGFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
TYGG FLYH+ + +++G ++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+
Sbjct: 301 RHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIA 360
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GG QS+P+ F GG IGC+ GFMNV +IKG HT++KSGIL A+SIF ++ S
Sbjct: 361 YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTS 420
Query: 373 NNKFNKLI-----TYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSG 425
N +K I Y+ + + SW++KELY RN +P+ G+Y GM+ GI + G
Sbjct: 421 ENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRG 480
Query: 426 KFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILK 485
P+TL + SD+ L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL L+
Sbjct: 481 MEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLR 540
Query: 486 NKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQN 544
+ IP++ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QN
Sbjct: 541 DDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQN 600
Query: 545 IEWITPEGGSGTNYPNM 561
I W+ PEGG G Y M
Sbjct: 601 INWVVPEGGGGPAYNGM 617
>sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2
Length = 617
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/557 (52%), Positives = 392/557 (70%), Gaps = 16/557 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAA RLKQLA + K++++C++EK + +GAH LSGA +DPR+
Sbjct: 64 RFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA 123
Query: 78 IFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLV 134
ELFP KEK L NTPV E+RF L+ K Y+IP ILP + NHGNY++ L LV
Sbjct: 124 FEELFPDWKEKGAPL-NTPVTEDRFGILTEK--YRIPVPILPGLPMNNHGNYVVRLGHLV 180
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
WMG++AE +G++++ G++A+EIL+ +V GIATN+ GI K+G K F+ G+EL+AK
Sbjct: 181 SWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 240
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG GHL+KQ+ KKF+L +PQTY +G+KELW I+ K K G V HT+GWPLD
Sbjct: 241 VTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 300
Query: 255 YKTYGGGFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
TYGG FLYH+ + +++G+++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+
Sbjct: 301 RHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIA 360
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GG QS+P+ F GG IGC+ GFMNV +IKG HT++KSG L A+SIF ++ S
Sbjct: 361 YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTS 420
Query: 373 NNKFNKLI-----TYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSG 425
N +K I Y+ + + SW++KELY RN +P+ G+Y GM+ GI +F G
Sbjct: 421 ENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIFRG 480
Query: 426 KFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILK 485
P+TL + SD L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL LK
Sbjct: 481 MEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLK 540
Query: 486 NKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQN 544
+ +P++ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QN
Sbjct: 541 DDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQN 600
Query: 545 IEWITPEGGSGTNYPNM 561
I W+ PEGG G Y M
Sbjct: 601 INWVVPEGGGGPAYNGM 617
>sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Rattus norvegicus GN=Etfdh PE=2 SV=1
Length = 616
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/557 (52%), Positives = 393/557 (70%), Gaps = 16/557 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
R + E DV+IVG GP+GLSAAIRLKQLA ++ K+I++C++EK +++GAH LSGA +DP +
Sbjct: 63 RFAEEADVVIVGAGPAGLSAAIRLKQLAAEQEKDIRVCLVEKAAQIGAHTLSGACLDPAA 122
Query: 78 IFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLV 134
ELFP KEK L NTPV E+RF L+ K ++IP ILP + NHGNYI+ L LV
Sbjct: 123 FKELFPDWKEKGAPL-NTPVTEDRFAILTEK--HRIPVPILPGLPMNNHGNYIVRLGHLV 179
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
WMG++AE +G++++ G++A+E+LY +V GIATN+ GI K+G K F+ G+EL+AK
Sbjct: 180 SWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 239
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG GHL+KQ KKF+L D QTY +G+KELW I+ K K G V HT+GWPLD
Sbjct: 240 VTIFAEGCHGHLAKQFYKKFDLRASCDAQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 299
Query: 255 YKTYGGGFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
TYGG FLYH+ + +++G+++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+
Sbjct: 300 RHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIA 359
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GGLQS+P+ F GG IGC+ GFMNV +IKG HT++KSG L A++IFK++ S
Sbjct: 360 YGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAEAIFKQLTS 419
Query: 373 NNKFNK-----LITYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSG 425
N +K + Y+ + + SW++KEL+ RN +P+ G+Y GM+ GI + G
Sbjct: 420 ENLQSKTAGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGIFYWILRG 479
Query: 426 KFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILK 485
P+TL + SD L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL LK
Sbjct: 480 MEPWTLKHKGSDSEQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLK 539
Query: 486 NKKIPIHINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQN 544
+ IP++ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QN
Sbjct: 540 DDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQN 599
Query: 545 IEWITPEGGSGTNYPNM 561
I W+ PEGG G Y M
Sbjct: 600 INWVVPEGGGGPAYNGM 616
>sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1
Length = 617
Score = 599 bits (1544), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/551 (52%), Positives = 389/551 (70%), Gaps = 16/551 (2%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELFP 83
DV+IVG GP+GLSAA+RLKQLA K+I++C++EK +++GAH LSGA +DP + ELFP
Sbjct: 70 DVVIVGAGPAGLSAAVRLKQLAAAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFP 129
Query: 84 --KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLVRWMGKK 140
KEK L NTPV E+RF L+ K Y+IP ILP + NHGNYI+ L LV WMG++
Sbjct: 130 DWKEKGAPL-NTPVTEDRFGILTEK--YRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQ 186
Query: 141 AENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAE 200
AE +G++++ G++A+E+L+ +V GIATN+ GI K+G K F+ G+EL+AK T+FAE
Sbjct: 187 AEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKVTIFAE 246
Query: 201 GSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTYGG 260
G GHL+KQ+ KKF+L +PQTY +G+KELW I+ K K G V HT+GWPLD TYGG
Sbjct: 247 GCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGG 306
Query: 261 GFLYHMENNQ--ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTI 318
FLYH+ + +++G ++ LDY+NPYLSPF EFQR+K HP I L+GGKRI+YGAR +
Sbjct: 307 SFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARAL 366
Query: 319 TTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK 378
GG QS+P+ F GG IGC+ GFMNV +IKG HT++KSGIL A+SIF ++ S N +K
Sbjct: 367 NEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQSK 426
Query: 379 -----LITYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSGKFPFTL 431
+ Y+ + + SW++KELY RN +P+ G+Y GM+ GI + G P+TL
Sbjct: 427 TMGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRGMEPWTL 486
Query: 432 HNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILKNKKIPI 491
+ SD+ L+PA PI+YP PD +++FD LSS+ +S NH+ DQP HL L++ IP+
Sbjct: 487 KHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPV 546
Query: 492 HINFSIYAGPEARYCPAGVYEFI-IEKNKIQHLQINAQNCIHCKTCDIKDPTQNIEWITP 550
+ N SIY GPE R+CPAGVYEF+ +E+ LQINAQNC+HCKTCDIKDP+QNI W+ P
Sbjct: 547 NRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVP 606
Query: 551 EGGSGTNYPNM 561
EGG G Y M
Sbjct: 607 EGGGGPAYNGM 617
>sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=1
SV=2
Length = 597
Score = 561 bits (1445), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/556 (49%), Positives = 377/556 (67%), Gaps = 16/556 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
RES YDV+IVGGGPSGLSAAIRL+QLA K KE+++CV+EK S +G H LSGA+I+ R+
Sbjct: 46 RESDVYDVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKASVIGGHTLSGAVIETRA 105
Query: 78 IFELFPKEK-LNKLFNTPVIEERFLFLSSKKSYKIPSWILP-ICFKNHGNYIISLSDLVR 135
+ EL P K L V E L+ +S +IP +LP + NHGNYI+ L +V+
Sbjct: 106 LDELIPNWKELGAPVYQQVTSESIAILT--ESGRIPVPVLPGVPLANHGNYIVRLGKVVQ 163
Query: 136 WMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKY 195
W+G++AE G++++ +ASE+LY+ +V GIAT++ GI K+G K F GME +AK
Sbjct: 164 WLGEQAEAAGVEVWPEIAASEVLYNEDGSVKGIATSDVGIGKDGAPKDGFARGMEFHAKC 223
Query: 196 TLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDY 255
T+FAEG RGHLSKQ++ KF+L + TY +G+KELW I+P H+ G V HT+GWPL+
Sbjct: 224 TIFAEGCRGHLSKQVLDKFDL--RTHAMTYGIGLKELWEIDPAKHRPGYVEHTMGWPLNV 281
Query: 256 KTYGGGFLYHMENNQ---ISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
YGG FLYH+E+ +S+G++++LDY NP L+P++EFQ+YKTHP I K L+GGKRI
Sbjct: 282 DQYGGSFLYHIEDQGQPLVSVGFVVALDYANPNLNPYKEFQKYKTHPSISKQLEGGKRIG 341
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICS 372
YGAR + GG QS+P+ F GG +GC+AGF+NV+++KG H ++KSG++ A+SIF+ I
Sbjct: 342 YGARALNEGGFQSIPKLHFPGGCLVGCSAGFLNVAKLKGTHNAMKSGMVAAESIFEDIQQ 401
Query: 373 NNKFNKLI---TYKTSFQASWLYKELYKARNFKPAMKKGL-YIGMLII-GIDQILFSGKF 427
+ + I TY + + +++ KEL RN +P+ L YIG LI GI + G
Sbjct: 402 KGEDVQTIDPATYDKNIRDTYVVKELKATRNIRPSFNTSLGYIGGLIYSGIFYVFGRGIE 461
Query: 428 PFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILKNK 487
P+TL + D L P I YP PD KLTFD L+S+ ++ NH EDQP HL LKN
Sbjct: 462 PWTLGHGKKDNEKLIPVKDAKEIDYPKPDGKLTFDLLTSVSLTGTNHTEDQPAHLTLKND 521
Query: 488 KIPIHINFSIYAGPEARYCPAGVYEFIIEK--NKIQHLQINAQNCIHCKTCDIKDPTQNI 545
++P+ +N ++Y GPEAR+CPAGVYEF+ + + LQINAQNCIHCKTCDIKDP QNI
Sbjct: 522 QVPLDVNLAVYGGPEARFCPAGVYEFVPSEADESKKRLQINAQNCIHCKTCDIKDPQQNI 581
Query: 546 EWITPEGGSGTNYPNM 561
W+TPEGG G Y M
Sbjct: 582 NWVTPEGGGGPKYEGM 597
>sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3
SV=1
Length = 606
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/560 (46%), Positives = 387/560 (69%), Gaps = 19/560 (3%)
Query: 17 PRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPR 76
PR+S ++DV+IVG GPSGLS AIRLKQL+ K K++++CV+EKGSE+G+HILSGA++DP+
Sbjct: 51 PRDSDQFDVVIVGAGPSGLSTAIRLKQLSEKAGKDLRVCVVEKGSEVGSHILSGAVMDPK 110
Query: 77 SIFELFP--KEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLV 134
++ EL P KEK L T V +++F FL+ +S ++P+ P N GNYIISL ++V
Sbjct: 111 ALNELIPDWKEKGAPLI-TEVKQDKFYFLTENRSLRLPT---PRLMHNEGNYIISLGNVV 166
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAK 194
RW+G++AE+MG++++ F+ASE+LY V GIATN+ GI K+G + NF GMEL A+
Sbjct: 167 RWLGEQAESMGVEVYPSFAASEVLYHDNGAVRGIATNDMGIAKDGSLTSNFTRGMELNAR 226
Query: 195 YTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLD 254
T+FAEG RG L+K + +KFNL ++ +PQT+ LGIKE W I P+ H++GLVIHT+G+PL
Sbjct: 227 LTIFAEGCRGSLTKGLFEKFNLRDECEPQTFGLGIKETWEIKPEKHQQGLVIHTLGYPLS 286
Query: 255 YKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYG 314
+ GG F+YH ENN +++G ++ LDY NPYL+P++EFQ+ K HP + +L+GG I YG
Sbjct: 287 DELLGGSFIYHAENNTVNLGLVVGLDYSNPYLNPYQEFQKLKLHPMVKDMLEGGTCIQYG 346
Query: 315 ARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNN 374
ARTI GG QS+P+ +F GGA +GC AGF++V ++KG H ++K+GIL A++ F ++ S
Sbjct: 347 ARTINEGGFQSIPKLVFPGGALVGCTAGFVHVPKVKGSHYAMKTGILAAEAAFPQLISQQ 406
Query: 375 KFNK-------------LITYKTSFQASWLYKELYKARNFKPAMKKGLYIGMLIIGIDQI 421
+ + + Y + SW++KEL + RN++P++ G G++ ++
Sbjct: 407 EKEQEQEQDKPSVEPLLINEYPEELKKSWVWKELREVRNYRPSLHWGTIPGLIYGALEMY 466
Query: 422 LFSGKFPFTLHNINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIH 481
+F G P+TL N D L+PA++ I+Y PD ++TFD ++S+ S NH+E+QPIH
Sbjct: 467 IFRGHTPWTLSNGKPDNERLKPAAECKKIEYKKPDGQITFDLMTSVMRSGTNHEENQPIH 526
Query: 482 LILKNKKIPIHINFSIYAGPEARYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIKDP 541
L +++ ++ +N IY GPE R+CPAGVYE++ + + L N+ C+HCKTCDIKDP
Sbjct: 527 LKVRDMEVAKKVNRDIYDGPEGRFCPAGVYEWVEGEKGEKELVRNSVFCLHCKTCDIKDP 586
Query: 542 TQNIEWITPEGGSGTNYPNM 561
TQNI++ PEGG G Y M
Sbjct: 587 TQNIDFTVPEGGGGPKYGAM 606
>sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1
Length = 632
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/548 (45%), Positives = 355/548 (64%), Gaps = 11/548 (2%)
Query: 18 RESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRS 77
RE + DV IVG GP+GLSAAIR+KQ A K N++I++ VLEK +E G H +SGA+I P +
Sbjct: 86 REVEDVDVCIVGAGPAGLSAAIRIKQQAAKANRDIRVVVLEKAAEPGNHSVSGAVIQPTA 145
Query: 78 IFELFPKEKLNKLFN-TPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRW 136
+ EL P + + N T V ++ FL K + IP +P KNHGNY++SL++ RW
Sbjct: 146 LDELLPNWRDDPPENCTAVTHDKMKFLIPKLHFPIP---VPPAMKNHGNYVMSLAEFTRW 202
Query: 137 MGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYT 196
+ KAE G++I+ F+ASE+LY+ +V G+ATN+FG++ +G+ K NF+ GM +A T
Sbjct: 203 LAAKAEEYGVEIYPSFAASEVLYNKDGSVIGVATNDFGVDSKGLPKDNFERGMAFHAPVT 262
Query: 197 LFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYK 256
LFAEG+ G LSK IIK+FNL +PQTY LG+KE+W + + +KG V HT+GWP+
Sbjct: 263 LFAEGAHGSLSKSIIKRFNLRGNCEPQTYGLGVKEVWRVPDENFRKGEVAHTLGWPMRND 322
Query: 257 TYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGAR 316
TYGGGF+Y +N +++G ++ LDY NPY+SP EFQR K +P K+LKGGK + Y AR
Sbjct: 323 TYGGGFMYQFGDNYVTVGLVVGLDYPNPYVSPALEFQRMKQNPFFAKVLKGGKCLEYAAR 382
Query: 317 TITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKF 376
+ GG Q++P+ +F GGA IGC+AGF+NV++IKG HT++KSGI+ AD+I +
Sbjct: 383 ALNEGGYQAIPKLVFPGGALIGCSAGFVNVAKIKGTHTAMKSGIVAADAIVDAFGRDAAS 442
Query: 377 NKLI--TYKTSFQASWLYKELYKARNFKPAMKK--GLYIGMLIIGIDQILFSGKFPFTLH 432
L+ Y+ + + ++++KELY RN +P+ G Y GM ++ + G+ P+TL
Sbjct: 443 KPLLLNDYEENLKNTYVFKELYSVRNIRPSFHSFLGNYGGMAYSAVEAYVLKGRVPWTLK 502
Query: 433 NINSDYTYLEPASKHIPIKYPNPDNKLTFDKLSSIYVSNINHDEDQPIHLILKNKKIPIH 492
+ D + ASK+ PI YP PDN L+FD +S+ S H E+QP HL K
Sbjct: 503 HKGGDAKATKSASKYKPINYPKPDNVLSFDIPTSVSRSATMHAENQPCHLFDHRPKDRKS 562
Query: 493 INFSIYAGPEARYCPAGVYEFIIEKNKI--QHLQINAQNCIHCKTCDIKDPTQNIEWITP 550
F Y G E ++CPAGVYE++ ++ + IN+QNC+HCKTCDIKDP Q I+W TP
Sbjct: 563 C-FETYKGVENKFCPAGVYEYVNDEASSYGKRFVINSQNCVHCKTCDIKDPLQGIQWKTP 621
Query: 551 EGGSGTNY 558
+GG G Y
Sbjct: 622 QGGDGPKY 629
>sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIR2 PE=1 SV=1
Length = 631
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/588 (43%), Positives = 371/588 (63%), Gaps = 38/588 (6%)
Query: 4 ISSLNHSLINKYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNK-EIKICVLEKGSE 62
++ L+N+ PR DV IVGGGP+GL+ AI+LKQL ++++ VLEK S
Sbjct: 46 LTEEEKELLNE--PRARDYVDVCIVGGGPAGLATAIKLKQLDNSSGTGQLRVVVLEKSSV 103
Query: 63 LGAHILSGAIIDPRSIFELFPKEK------LNKLFNTPVIEERFLFLSSKKSYKIPSWIL 116
LG +SGAI++P ELFP EK L K T V +E FL K + +P
Sbjct: 104 LGGQTVSGAILEPGVWKELFPDEKSDIGIPLPKELATLVTKEHLKFLKGKWAISVPE--- 160
Query: 117 PICFKNHG-NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGI 175
P N G NYI+SL+ +V ++G+KAE +G++++ G + S+++YD N V G+ T + GI
Sbjct: 161 PSQMINKGRNYIVSLNQVVGYLGEKAEEVGVEVYPGIAVSDLIYDENNAVKGVITKDAGI 220
Query: 176 NKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTI 235
+K G K+ F+ GME +A+ T+ AEG G L+KQ + K++L + QTY LGIKE+W +
Sbjct: 221 SKSGKPKETFERGMEFWARQTVLAEGCHGSLTKQALAKYDLRKGRQHQTYGLGIKEVWEV 280
Query: 236 NPKLHKKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISLDYKNPYLSPFEEFQRY 295
P+ KG HT+G+PL YGGGF YH + +++G ++ LDYKNPY+SP++EFQ+
Sbjct: 281 KPENFNKGFAAHTMGYPLTNDVYGGGFQYHFGDGLVTVGLVVGLDYKNPYVSPYKEFQKM 340
Query: 296 KTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTS 355
K HP K+L+GGK I+Y AR + GGLQS+P+ F GG +G +AGFMNV +IKG HT+
Sbjct: 341 KHHPYYSKVLEGGKCIAYAARALNEGGLQSVPKLNFPGGVLVGASAGFMNVPKIKGTHTA 400
Query: 356 IKSGILVADSIFKKI-------------CSNNKFNK-----LITYKTSFQASWLYKELYK 397
+KSG+L A+SIF+ I F+K L +Y+++F+ S +YKELY+
Sbjct: 401 MKSGLLAAESIFESIKGLPVLEEVEDEDAKMAMFDKEATINLESYESAFKESSIYKELYE 460
Query: 398 ARNFKPAM--KKGLYIGMLIIGIDQILFSGKFPFTLH-NINSDYTYLEPASKHIPIKYPN 454
RN +P+ K G Y GM+ GID ++ GK P+TL + +D LEPASK+ PI+YP
Sbjct: 461 VRNIRPSFSGKLGGYGGMIYSGIDSLILKGKVPWTLKFDEKNDGEILEPASKYKPIEYPK 520
Query: 455 PDNKLTFDKLSSIYVSNINHDEDQPIHLILKNKKIPIHI--NFSIYAGPEARYCPAGVYE 512
PD ++FD L+S+ + HD+D+P HL + + + + +F ++ G E+R+CPAGVYE
Sbjct: 521 PDGVISFDILTSVSRTGTYHDDDEPCHLRVPGQDMVKYAERSFPVWKGVESRFCPAGVYE 580
Query: 513 FI-IEKNKI-QHLQINAQNCIHCKTCDIKDPTQNIEWITPEGGSGTNY 558
F+ EK+ + LQIN+QNCIHCKTCDIK P Q+I W PEGG G Y
Sbjct: 581 FVKDEKSPVGTRLQINSQNCIHCKTCDIKAPRQDITWKVPEGGDGPKY 628
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 181/394 (45%), Gaps = 38/394 (9%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D I+VG G +G +A + L + + +K+ LE+G G+ + GAI+ + +L
Sbjct: 6 FDAIVVGAGMAGNAATLTLAR------RGLKVLQLERGEYSGSKNVQGAILYADMLEKLV 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + + ++E+RF L + + + Y I + +W K +
Sbjct: 60 PDFREDAPLERHLVEQRFWMLDDRSHVGLHYRSEDFNEEKPNRYTIIRAQFDKWFSSKVK 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + + +E++ D+ V G+ T+ + G +++A + AEG
Sbjct: 120 EAGATVLCETTVTELVQDAYGKVIGVKTD--------------RSGGQIHADVVVLAEGV 165
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELW-----TINPKLH---KKGLVIHTIGWPLD 254
G L K +L + P+ +L +KE+ TI + + +G+VI G +
Sbjct: 166 NGLLGT----KAHLRERPKPEHVALAVKEMHFLPRETIEARFNLQGDEGVVIEAAG-TIS 220
Query: 255 YKTYGGGFLY-HMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISY 313
G GF+Y + E + IG ++S D++ +P+ +R+K+HP + +++G + Y
Sbjct: 221 RGMTGMGFIYANKECISLGIGCLVS-DFQKTGETPYGLLERFKSHPSVAPLIEGSEVKEY 279
Query: 314 GARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSN 373
A I GG +++P+ DG +G A N +G + ++ SG + A++IF+
Sbjct: 280 AAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAAEAIFQVKSRR 339
Query: 374 NKFNK--LITYKTSFQASWLYKELYKARNFKPAM 405
+ L YKT + S++ K++ K ++ PA+
Sbjct: 340 EPMSAKNLSLYKTMLEESFVLKDMKKYKDL-PAL 372
>sp|P10331|FIXC_BRAJA Protein FixC OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixC
PE=3 SV=2
Length = 435
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 155/365 (42%), Gaps = 31/365 (8%)
Query: 52 IKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLFLSSKKSYKI 111
+K+ LE+G G+ + GAI+ + +L P+ + +IE+RF + + +
Sbjct: 29 MKVLQLERGEYPGSKNVQGAILYADMMEKLIPEFREEAPLERHLIEQRFWMMDDRSHVGM 88
Query: 112 PSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATN 171
+ Y I + +W K G + + +E+ D +N V G+ T+
Sbjct: 89 HYRSEDFNEQRPNRYTIIRAQFDKWFSSKVREAGAIVLCETTVTELAQDDRNRVVGVRTD 148
Query: 172 NFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKE 231
++G E++A + AEG G L + L + P +L +KE
Sbjct: 149 R----RDG----------EIHADVVVLAEGVNGLLGT----RAGLRARPAPDNVALAVKE 190
Query: 232 LW-----TINPKLHKKG---LVIHTIGWPLDYKTYGGGFLY-HMENNQISIGYIISLDYK 282
+ TI + + KG +VI G + G GF+Y + E + IG +++ D++
Sbjct: 191 MHFLPRETIEARFNLKGDEGVVIEAAG-TISRGMTGMGFIYANKECISLGIGCLVA-DFQ 248
Query: 283 NPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAG 342
+P+ +K HP + ++ G + Y A I GG +S+P+ +G +G A
Sbjct: 249 RTGQTPYGLLDEFKRHPSVAPLIAGSEVKEYSAHLIPEGGYKSIPQLYGEGWVVVGDAAQ 308
Query: 343 FMNVSRIKGIHTSIKSGILVADSI--FKKICSNNKFNKLITYKTSFQASWLYKELYKARN 400
N +G + ++ SG + A++I K L YK S++ K+L K ++
Sbjct: 309 LNNAVHREGSNLAMTSGRIAAEAIGLVKSRGEPMSATNLSIYKKMLDDSFVIKDLKKYKD 368
Query: 401 FKPAM 405
P M
Sbjct: 369 LPPLM 373
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 170/398 (42%), Gaps = 43/398 (10%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
++D I+VG G +G AA+ + + + + V+E+G G ++G + ++ +
Sbjct: 5 KFDAIVVGAGVAGSVAALVMARAGLD------VLVIERGDSAGCKNMTGGRLYAHTLEAI 58
Query: 82 FPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKA 141
P ++ V E+ FL+ + + + H +Y + + L W+ ++A
Sbjct: 59 IPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQA 118
Query: 142 ENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGME-LYAKYTLFAE 200
E G G ++ + N V G+ Q G + L A + A+
Sbjct: 119 EQAGAQFIPGVRVDALVREG-NKVTGV-----------------QAGDDILEANVVILAD 160
Query: 201 GSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPK--------LHKKGLVIHTIGWP 252
G L + + + DP Y++G+KE+ + P+ ++G G P
Sbjct: 161 GVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSP 216
Query: 253 LDYKTYGGGFLYHMENNQISIGYIISL-DYKNPYLSPFEEFQRYKTHPKICKILKGGKRI 311
D GGGFLY + IS+G + L D + S + + +K HP I ++ GGK +
Sbjct: 217 SD-GLMGGGFLY-TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLL 274
Query: 312 SYGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIF-K 368
Y A + GGL +P+ + +G +G AGF +N+ ++G+ +I S A ++
Sbjct: 275 EYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA 334
Query: 369 KICSNNKFNKLITYKTSFQASWLYKELYKARNFKPAMK 406
K ++ + L YK + S + +++ R M+
Sbjct: 335 KERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALME 372
>sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1
Length = 435
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 46/399 (11%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
+D I+VG G SG +AA + ++ +K+ LE+G G+ + GAI+ + +
Sbjct: 5 RFDAIVVGAGMSGNAAAYTMA------SRGLKVLQLERGEYPGSKNVQGAILYANMLETI 58
Query: 82 FPKEKLNKLFNTPVIEERFLFLSSKKS----YKIPSWILPICFKNHGNYIISLSDLVRWM 137
P + + ++E+RF Y+ + P + Y I + +W
Sbjct: 59 IPDFRDDAPLERHLVEQRFWVTDDTSHTGMHYRSDDFNEPAPNR----YTIIRAQFDKWF 114
Query: 138 GKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTL 197
+K G + + +E+ D+ V G+ T+ G G+I +A +
Sbjct: 115 SRKVRAAGAIVLCETTVTELALDAAGKVIGVHTDRAG----GVI----------HADVVV 160
Query: 198 FAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELW-----TINPKLH---KKGLVIHTI 249
AEG G L + +F K P+ +L +KE+ IN + +G VI
Sbjct: 161 LAEGVNGLLGTR--ARFRKVPK--PEAVALAVKEMHFLPEEVINERFGLTGDQGCVIEAA 216
Query: 250 GWPLDYKTYGGGFLY-HMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGG 308
G + G GFLY + E+ + IG ++S + SP+ +K HP I +L G
Sbjct: 217 G-TISRGMAGLGFLYTNKESISLGIGCLVS-HFAATLESPYALLDAFKNHPSIRPLLAGS 274
Query: 309 KRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSIFK 368
+ Y A I GG +++P+ DG +G A N +G + ++ SG + ++I
Sbjct: 275 EIKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAGEAIAA 334
Query: 369 KICSNNKF--NKLITYKTSFQASWLYKELYKARNFKPAM 405
+ + L YK S++ K+L K ++ PA+
Sbjct: 335 IKSRKHPMTSDNLSLYKAMLDKSFVLKDLRKYKDM-PAL 372
>sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixC PE=3 SV=1
Length = 428
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 43/368 (11%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLERII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + E+ F++ + I + +Y + S W+ ++AE
Sbjct: 60 PGFADQAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G ++ V G+ +G I L AK + A+G
Sbjct: 120 EAGAQLITGIRVDNVVQRDGKVV--------GVEADGDI---------LEAKVVILADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKL---------HKKGLVIHTIGWPL 253
L++ K + + + ++G+KEL + PKL +G G P
Sbjct: 163 NSLLAE----KLGMTKRVEASHVAVGVKELIEL-PKLVIEDRFQLQGNEGAACLFAGAPT 217
Query: 254 DYKTYGGGFLYHMENNQISIGYIISLDY-KNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
D GGGFLY E +S+G + L + K+ S + + +K HP + ++ GGK +
Sbjct: 218 D-GLMGGGFLYTNETT-LSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVE 275
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFKKI 370
Y A + G+ PE + DG G AG MN+ I+G+ +I +G A ++ +
Sbjct: 276 YAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAM 335
Query: 371 CSNNKFNK 378
+ F+K
Sbjct: 336 -KRDDFSK 342
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 43/368 (11%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLERII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + E+ F++ + I + +Y + S W+ ++AE
Sbjct: 60 PGFADQAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G ++ V G+ +G I L AK + A+G
Sbjct: 120 EAGAQLITGIRVDNVVQRDGKVV--------GVEADGDI---------LEAKVVILADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPK---------LHKKGLVIHTIGWPL 253
L++ K + + + ++G+KEL + PK +G G P
Sbjct: 163 NSLLAE----KLGMAKRVEASHVAVGVKELIEL-PKSVIEDRFQLQGNEGAACLFAGAPT 217
Query: 254 DYKTYGGGFLYHMENNQISIGYIISLDY-KNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
D GGGFLY E +S+G + L + K+ S + + +K HP + ++ GGK +
Sbjct: 218 D-GLMGGGFLYTNETT-LSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVE 275
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFKKI 370
Y A + G+ PE + DG G AG MN+ I+G+ +I +G A ++ +
Sbjct: 276 YAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAM 335
Query: 371 CSNNKFNK 378
+ F+K
Sbjct: 336 -KRDDFSK 342
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 163/384 (42%), Gaps = 47/384 (12%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + + E+ F++ K + + + +Y + S W+ ++AE
Sbjct: 60 PGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G ++ V G+ +G + + AK L A+G
Sbjct: 120 EAGAQLITGIRVDNLVQRDGKVV--------GVEADGDV---------IEAKTVLLADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK--------KGLVIHTIGWPLD 254
L++ K + + P ++G+KEL + + + +G G P D
Sbjct: 163 NSILAE----KLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD 218
Query: 255 YKTYGGGFLYHMENNQISIGYIISL----DYKNPYLSPFEEFQRYKTHPKICKILKGGKR 310
GGGFLY EN +S+G + L D K E+F K HP + ++ GGK
Sbjct: 219 -GLMGGGFLYTNENT-LSLGLVCGLHHLHDAKKSVPQMLEDF---KQHPAVAPLIAGGKL 273
Query: 311 ISYGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFK 368
+ Y A + G+ LPE + DG G AG MN+ I+G+ +I +G A ++
Sbjct: 274 VEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLS 333
Query: 369 KICSNN-KFNKLITYKTSFQASWL 391
+ S++ KL Y+ ++ L
Sbjct: 334 AMKSDDFSKQKLAEYRQHLESGPL 357
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 47/384 (12%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + + E+ F++ K + + + +Y + S W+ ++AE
Sbjct: 60 PGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G L V G+ + G + AK + A+G
Sbjct: 120 EAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK--------KGLVIHTIGWPLD 254
L++ K + + P ++G+KEL + + + +G G P D
Sbjct: 163 NSILAE----KLGMAKRVKPTNVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD 218
Query: 255 YKTYGGGFLYHMENNQISIGYIISL----DYKNPYLSPFEEFQRYKTHPKICKILKGGKR 310
GGGFLY EN +S+G + L D K E+F K HP + ++ GGK
Sbjct: 219 -GLMGGGFLYTNENT-LSLGLVCGLHHLHDAKKSVPQMLEDF---KQHPAVAPLIAGGKL 273
Query: 311 ISYGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFK 368
+ Y A + G+ LPE + DG G AG MN+ I+G+ +I +G A ++
Sbjct: 274 VEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLS 333
Query: 369 KICSNN-KFNKLITYKTSFQASWL 391
+ S++ KL Y+ ++ L
Sbjct: 334 AMKSDDFSKQKLAEYRQHLESGPL 357
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 47/384 (12%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + + E+ F++ K + + + +Y + S W+ ++AE
Sbjct: 60 PGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G L V G+ + G + AK + A+G
Sbjct: 120 EAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK--------KGLVIHTIGWPLD 254
L++ K + + P ++G+KEL + + + +G G P D
Sbjct: 163 NSILAE----KLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD 218
Query: 255 YKTYGGGFLYHMENNQISIGYIISL----DYKNPYLSPFEEFQRYKTHPKICKILKGGKR 310
GGGFLY EN +S+G + L D K E+F K HP + ++ GGK
Sbjct: 219 -GLMGGGFLYTNENT-LSLGLVCGLHHLHDAKKSVPQMLEDF---KQHPAVAPLIAGGKL 273
Query: 311 ISYGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFK 368
+ Y A + G+ LPE + DG G AG MN+ I+G+ +I +G A ++
Sbjct: 274 VEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLS 333
Query: 369 KICSNN-KFNKLITYKTSFQASWL 391
+ S++ KL Y+ ++ L
Sbjct: 334 AMKSDDFSKQKLAEYRQHLESGPL 357
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 47/384 (12%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFELF 82
+D IIVG G +G AA+ L + + ++ V+E+G+ GA ++G + S+ +
Sbjct: 6 FDAIIVGAGLAGSVAALVLAR------EGAQVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 83 PKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKAE 142
P + + E+ F++ K + + + +Y + S W+ ++AE
Sbjct: 60 PGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAE 119
Query: 143 NMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGS 202
G + +G L V G+ + G + AK + A+G
Sbjct: 120 EAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILADGV 162
Query: 203 RGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHK--------KGLVIHTIGWPLD 254
L++ K + + P ++G+KEL + + + +G G P D
Sbjct: 163 NSILAE----KLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD 218
Query: 255 YKTYGGGFLYHMENNQISIGYIISL----DYKNPYLSPFEEFQRYKTHPKICKILKGGKR 310
GGGFLY EN +S+G + L D K E+F K HP + ++ GGK
Sbjct: 219 -GLMGGGFLYTNENT-LSLGLVCGLHHLHDAKKSVPQMLEDF---KQHPAVAPLIAGGKL 273
Query: 311 ISYGARTITTGGLQSLPEFIFDGGAFIGCNAGF-MNVS-RIKGIHTSIKSGILVADSIFK 368
+ Y A + G+ LPE + DG G AG MN+ I+G+ +I +G A ++
Sbjct: 274 VEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLS 333
Query: 369 KICSNN-KFNKLITYKTSFQASWL 391
+ S++ KL Y+ ++ L
Sbjct: 334 AMKSDDFSKQKLAEYRQHLESGPL 357
>sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1
Length = 427
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 47/366 (12%)
Query: 52 IKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLFLSSKK---S 108
+K+ +E+G G+ + GAI+ +I ++ P + + +IE+R +
Sbjct: 28 LKVLQIERGETPGSKNVQGAILYADAIEKIIPDFRDDAPLERHLIEQRVWVMDDASYGYH 87
Query: 109 YKIPSWILPICFKNHGNYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYD---SKNNV 165
Y+ + P + Y I +W KKA G+ + E +D V
Sbjct: 88 YRSEDFNKP----PYNRYTIIRVHFDQWFNKKAREAGV-----LTICETRHDLLIEGGKV 138
Query: 166 CGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTY 225
G+ T+ + G E+ A + A+G L+ + F+ D P+ +
Sbjct: 139 VGVRTD--------------RQGGEVRADAVILADGVNSRLA--VKAGFSRDQ---PENW 179
Query: 226 SLGIKELW-----TINPKLH--KKGLVIHTIGWPLDYKTYGGGFLY-HMENNQISIGYII 277
+L +KE+ T+ + + ++ I G +D G GFLY + E+ + +G ++
Sbjct: 180 ALAVKEIHFLPQETMEARFNIGEEEAAIEMAG-KIDAGMMGTGFLYTNKESITLGVGCML 238
Query: 278 SLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRISYGARTITTGGLQSLPEFIFDGGAFI 337
S D+K +SP+E R KTHP I ++ G Y A I GG ++P+ ++ G I
Sbjct: 239 S-DFKQQKISPYELLDRMKTHPSIAPLIAGSDMKEYAAHLIPEGGYNAIPQ-VYGDGWMI 296
Query: 338 GCNAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNK--LITYKTSFQASWLYKEL 395
+A + +G + ++ +G+L A ++ + ++ F+ L YK S++ K+L
Sbjct: 297 AGDAPIRHGIHREGSNLAMTTGMLAAQTLVELRAADKPFSAANLAEYKKKLDDSFVMKDL 356
Query: 396 YKARNF 401
K R
Sbjct: 357 KKYRRM 362
>sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1
Length = 435
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 158/391 (40%), Gaps = 37/391 (9%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFEL 81
++D I+VG G SG +AA + ++ +K+ LE+G G+ + GAI+ + +
Sbjct: 5 KFDAIVVGAGMSGNAAAYAMA------SRGLKVLQLERGEYPGSKNVQGAIMYANMLEAI 58
Query: 82 FPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMGKKA 141
P + + ++E+RF + + Y I + +W+ +K
Sbjct: 59 IPDFRNDAPLERHLVEQRFWIMDDTSHTGMHYRSDDFNEVTPNRYTIIRAQFDKWLSRKV 118
Query: 142 ENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLFAEG 201
G + +A+ + +DS G+ T+ + G + A + AEG
Sbjct: 119 CEAGGTVLCETTATGLEWDSAGKAIGVRTD--------------RAGDVVLADVVVLAEG 164
Query: 202 SRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKL--------HKKGLVIHTIGWPL 253
G L + L + +L +KEL + ++ +G VI G +
Sbjct: 165 VNGLLGT----RAGLREMPKSKNVALAVKELHFLPEEVIAERFGLTGDEGCVIEA-GGTI 219
Query: 254 DYKTYGGGFLY-HMENNQISIGYIISLDYKNPYLSPFEEFQRYKTHPKICKILKGGKRIS 312
G GFLY + E+ + IG +IS ++ P+ +K HP I ++ G +
Sbjct: 220 SRGMAGLGFLYTNKESISLGIGCLIS-NFAETMERPYALLDAFKRHPSIQPLIAGSEVKE 278
Query: 313 YGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVAD--SIFKKI 370
Y A I GG ++P +G +G A N +G + ++ SG + + SI K
Sbjct: 279 YAAHLIPEGGFNAIPRLCGNGWVVVGDAAQLNNAVHREGSNLAMASGRMAGEAISIIKSR 338
Query: 371 CSNNKFNKLITYKTSFQASWLYKELYKARNF 401
L YKT S++ ++L K ++
Sbjct: 339 GGVMDKASLSLYKTMLDKSFVVEDLSKQKDM 369
>sp|Q46904|YGCN_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YgcN
OS=Escherichia coli (strain K12) GN=ygcN PE=3 SV=2
Length = 423
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 148/373 (39%), Gaps = 50/373 (13%)
Query: 52 IKICVLEKGSELGAHILSGAIIDPRSIFELFPKEKLNKLFNTPVIEERFLFLSSKKSYKI 111
+ + +LE+ G+ LSG + ++ EL P+ L + E L+
Sbjct: 28 LSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTF 87
Query: 112 PSWILPICFKNHG-NYIISLSDLVRWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIAT 170
S + G ++ + + W+ +AE G++ G + + LY+ VCG+
Sbjct: 88 SS------LQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATV-DALYEENGRVCGV-- 138
Query: 171 NNFGINKEGIIKKNFQLGMELYAKYTLFAEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIK 230
I + I++ A+Y + AEG+ L++ + L + + +LGIK
Sbjct: 139 ----ICGDDILR----------ARYVVLAEGANSVLAE----RHGLVTRPAGEAMALGIK 180
Query: 231 ELWT-----INPKLH---KKGLVIHTIGWPLDYKTYGGGFLYHMENNQISIGYIISLDYK 282
E+ + I + H +G + G D GG FLY +S+G + L
Sbjct: 181 EVLSLETSAIEERFHLENNEGAALLFSGRICD-DLPGGAFLY-TNQQTLSLGIVCPLSSL 238
Query: 283 NPYLSPFEEF-QRYKTHPKICKILKGGKRISYGARTITTGGLQSLP------EFIFDGGA 335
P E R+K HP + ++K + + YGA + GGL S+P ++ G A
Sbjct: 239 TQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDA 298
Query: 336 FIGC-NAGFMNVSRIKGIHTSIKSGILVADSIFKKICSNNKFNKLITYKTSFQASWLYKE 394
C N G ++G+ ++ A ++ N Y + + S L+
Sbjct: 299 LRSCVNTGI----SVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDV 354
Query: 395 LYKARNFKPAMKK 407
L + ++ +++
Sbjct: 355 LQRYQHVPALLQR 367
>sp|P26485|FIXX_AZOC5 Ferredoxin-like protein OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=fixX PE=4 SV=1
Length = 97
Score = 44.3 bits (103), Expect = 0.003, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 504 RYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCD-IKDPTQNIEWITPEGGSG 555
+ CPA YE N+ +++ C+ C TC I +P+ +IEW P GG G
Sbjct: 43 KLCPARCYEL----NEAGQVEVTVDGCVECGTCRVIAEPSGDIEWTYPRGGFG 91
>sp|P10326|FIXX_BRAJA Ferredoxin-like protein OS=Bradyrhizobium japonicum (strain USDA
110) GN=fixX PE=4 SV=1
Length = 98
Score = 43.9 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 504 RYCPAGVYEFIIEKNKIQHLQINAQNCIHCKTCD-IKDPTQNIEWITPEGGSG 555
+ CPA YE N +++ CI C TC I +PT +IEW P GG G
Sbjct: 44 KACPARCYEL----NDNGQVEVTVDGCIECGTCRVIAEPTGDIEWSHPRGGYG 92
>sp|Q5URB2|YR188_MIMIV Uncharacterized protein R188 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R188 PE=1 SV=1
Length = 509
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 5 SSLNHSLINKYGPRESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64
SS + +N P +E D++IVGGG SG+ +A RL Q K K+ V+E+ S LG
Sbjct: 3 SSFSKCKVNTCNPSNCLEVDILIVGGGASGIYSAWRLSQTYPNK----KVLVIEEKSYLG 58
Query: 65 AHILS 69
+ S
Sbjct: 59 GRLES 63
>sp|Q02733|IRC15_YEAST Increased recombination centers protein 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC15 PE=1
SV=1
Length = 499
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFE-- 80
YDV+++G GP G +AA++ Q + + CV ++ S GA+++ GA+ ++E
Sbjct: 18 YDVLVIGCGPGGFTAAMQASQAGL-----LTACVDQRASLGGAYLVDGAVPSKTLLYESY 72
Query: 81 ---LFPKEKLNKLFNTPVIEERFLFLSSKKSYK 110
L +++L + T + +F +++ + K
Sbjct: 73 LYRLLQQQELIEQRGTRLFPAKFDMQAAQSALK 105
>sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dld1 PE=2 SV=2
Length = 511
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
EYD+ ++GGGP G AAIR QL +K ICV ++G+ LG L+ I +++
Sbjct: 45 EYDLCVIGGGPGGYVAAIRGAQLGLK-----TICVEKRGT-LGGTCLNVGCIPSKALL 96
>sp|A6UV59|RUBPS_META3 Ribose 1,5-bisphosphate isomerase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1
Length = 263
Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 49/269 (18%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSI 78
+++E DV+IVGGGPSGL+A L + +K+ +LE+ G G + P
Sbjct: 29 DNLEVDVVIVGGGPSGLTAGRYL------ADAGVKVLILERHLSFGGGTWGGGMGCPYIT 82
Query: 79 FELFPKEKLNKLFNTPVIEERFLFLSSKKSYKIPSWILPICFKNHGNYIISLSDLVRWMG 138
+ E L+++ E LF++ S ++P+ +G
Sbjct: 83 VQSPADEILSEVGIKLEEGEDGLFVAD--SVEVPA----------------------KLG 118
Query: 139 KKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINKEGIIKKNFQLGMELYAKYTLF 198
A + G + +G +++ + V G+ N++ INK G+ + AKY +
Sbjct: 119 TGAIDAGAKVLTGIVVEDVIL-KEGKVSGVVINSYAINKAGLHIDPLTIN----AKYVID 173
Query: 199 AEGSRGHLSKQIIKKFNLDNKKDPQTYSLGIKELWTINPKLHKKGLVIHTIGWPLDYKTY 258
A G ++ + +K +D G K LW + GL+ +T + +
Sbjct: 174 ATGHDASVACTLARK-----NEDLGLVIPGEKSLWADE---GENGLLKYT------KELF 219
Query: 259 GGGFLYHMENNQISIGYIISLDYKNPYLS 287
G F+ M +N GY + + Y+S
Sbjct: 220 PGLFVCGMASNATHGGYRMGAVFGGMYIS 248
>sp|Q9HMC7|RUBPS_HALSA Putative ribose 1,5-bisphosphate isomerase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_2604G PE=3 SV=1
Length = 310
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 6/41 (14%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEK 59
+ E DVIIVGGGPSGL AA K+LA ++++ + ++EK
Sbjct: 28 DDTETDVIIVGGGPSGLMAA---KELA---DRDVDVTIIEK 62
>sp|B0R884|RUBPS_HALS3 Putative ribose 1,5-bisphosphate isomerase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1)
GN=OE_4651F PE=3 SV=1
Length = 310
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 6/41 (14%)
Query: 19 ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEK 59
+ E DVIIVGGGPSGL AA K+LA ++++ + ++EK
Sbjct: 28 DDTETDVIIVGGGPSGLMAA---KELA---DRDVDVTIIEK 62
>sp|P81156|GOX_PENAG Glucose oxidase OS=Penicillium amagasakiense PE=1 SV=1
Length = 587
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAII-DPRSIFEL 81
YD II GGG +GL+ A +L + N +IK+ V+EKG GAII DP + ++
Sbjct: 25 YDYIIAGGGLTGLTVAAKLTE-----NPKIKVLVIEKGFY---ESNDGAIIEDPNAYGQI 76
Query: 82 FPKEKLNKLFNTPVIEER 99
F P+I R
Sbjct: 77 FGTTVDQNYLTVPLINNR 94
>sp|Q92452|GOX_TALFL Glucose oxidase OS=Talaromyces flavus GN=GOX PE=3 SV=1
Length = 605
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAII-DPRSIFEL 81
YD II GGG +GL+ A +L + N +IK+ V+EKG GAII DP + ++
Sbjct: 43 YDYIIAGGGLTGLTVAAKLTE-----NPKIKVLVIEKGFY---ESNDGAIIEDPNAYGQI 94
Query: 82 FPKEKLNKLFNTPVIEER 99
F P+I R
Sbjct: 95 FGTTVDQNYLTVPLINNR 112
>sp|P32318|THI4_YEAST Thiamine thiazole synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=THI4 PE=1 SV=1
Length = 326
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 14/69 (20%)
Query: 24 DVIIVGGGPSGLSAAIRLKQLAIKKNK-EIKICVLEK------GSELGAHILSGAIIDPR 76
DVIIVG G SGLSAA I KN+ ++K+C++E GS LG + S ++ R
Sbjct: 67 DVIIVGAGSSGLSAA-----YVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVM--R 119
Query: 77 SIFELFPKE 85
LF +E
Sbjct: 120 KPAHLFLQE 128
>sp|P50736|YPDA_BACSU Uncharacterized protein YpdA OS=Bacillus subtilis (strain 168)
GN=ypdA PE=4 SV=2
Length = 324
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGS 61
I+ II+GGGP GLSAAI LKQ+ I V+EKG+
Sbjct: 2 IQEKAIIIGGGPCGLSAAIHLKQIGIDA------LVIEKGN 36
>sp|P09821|FIXC_RHILE Protein FixC (Fragment) OS=Rhizobium leguminosarum GN=fixC PE=3
SV=1
Length = 163
Score = 38.5 bits (88), Expect = 0.15, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 307 GGKRISYGARTITTGGLQSLPEFIFDGGAFIGCNAGFMNVSRIKGIHTSIKSGILVADSI 366
G + Y A I GG +++P+ +G +G A N +G + ++ SG++ ++I
Sbjct: 1 GSEIKEYAAHLIPEGGFKAIPQLFGNGWVVVGDAAQLNNAVHREGSNLAMTSGLMAGEAI 60
Query: 367 FKKICSNNKFNK--LITYKTSFQASWLYKELYKARNF 401
F+ K L YK S++ K+L K ++
Sbjct: 61 FQIKSRGGLMTKRNLSLYKGMLGKSFVMKDLMKHKDL 97
>sp|Q55GI5|L2HDH_DICDI L-2-hydroxyglutarate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=l2hgdh PE=3 SV=1
Length = 446
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 23 YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
YDV IVGGG GL+ L +K+N ++KI +LEK +E+ H
Sbjct: 26 YDVAIVGGGIVGLATGREL----LKRNPKLKIVILEKENEIAPH 65
>sp|P08710|FIXX_RHILT Ferredoxin-like protein OS=Rhizobium leguminosarum bv. trifolii
GN=fixX PE=4 SV=1
Length = 98
Score = 38.1 bits (87), Expect = 0.21, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 506 CPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDIK-DPTQNIEWITPEGGSG 555
CPA Y+ N + + I + C+ C TC++ P +IEW P GG G
Sbjct: 46 CPAKCYQL----NDRRQVIIVSDGCLECGTCNVLCGPDGDIEWTYPRGGFG 92
>sp|A6UPZ7|RUBPS_METVS Ribose 1,5-bisphosphate isomerase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3
SV=1
Length = 261
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 6/39 (15%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEK 59
IE DV+IVGGGPSGL+AA L + K +K VLE+
Sbjct: 28 IEVDVVIVGGGPSGLTAAKYLAE------KGVKTLVLER 60
>sp|P09823|FIXX_RHILE Ferredoxin-like protein OS=Rhizobium leguminosarum GN=fixX PE=4
SV=1
Length = 98
Score = 37.4 bits (85), Expect = 0.30, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 506 CPAGVYEFIIEKNKIQHLQINAQNCIHCKTCDI-KDPTQNIEWITPEGGSG 555
CPA YE N+I + I + C+ C TC + + + +I+W P GG G
Sbjct: 46 CPAKCYEV----NEIGQVAIVSDGCLECGTCRVLAEASGDIKWNYPRGGFG 92
>sp|A8ZVP3|THI4_DESOH Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1
Length = 258
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 6 SLNHSLINKYGPR--ESIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSEL 63
+++ ++I+++ + ++E DV +VGGGPSGL AA RL + K+ + E+ +
Sbjct: 7 TISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAG------RKVALFERKLSI 60
Query: 64 GAHILSGAII 73
G + GA++
Sbjct: 61 GGGMWGGAML 70
>sp|P57215|RNFC_BUCAI Electron transport complex protein RnfC OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=rnfC PE=3
SV=1
Length = 473
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 63/329 (19%)
Query: 272 SIGYIISLDYKNPY--LSPFEEFQRYKTHPKICKI--------LKGG-----KRISYG-- 314
+I +IS DY + + L+P +++++Y K+ KI L GG K+I +
Sbjct: 65 NIKIVISPDYLDQWIRLNPIKDYKKYAPE-KLIKIIHQSGVVGLGGGQFPSSKKIIFSIN 123
Query: 315 -ARTITTGGLQSLPEFIFD--------GGAFIGCNAGFMNVSRIKGIHTSIKSGILVADS 365
A T+ ++S P D IGC +++IK + +I+ + + S
Sbjct: 124 RAHTLIVNAVESEPYITSDNCLIYNHISEILIGCKI-ICWITKIKTVLIAIQEDNIQSIS 182
Query: 366 IFKKICSNNKFNKLITYKTSFQASWLYKELYKARNFK--PAMKKGLYIGMLIIGIDQI-- 421
+ + N K+ K + A K L K+ K P K + IG LI + I
Sbjct: 183 KIQHLIKNKSLFKICIIKKKYPAGS-SKVLVKSLTGKEVPHGKHSIDIGYLIFNVATIFS 241
Query: 422 ----LFSGKFPFT--LHNINSDYTYLEP---ASKHIPIKYPNPDNKLTFDKLSSIY---- 468
+ +GK P T + + SD L PIKY NKL ++S+Y
Sbjct: 242 IKRAIINGK-PLTERVVTLMSDKNLLSGNFWVRIGTPIKYFLTSNKLKQSFIASVYLGGP 300
Query: 469 -----VSNINHDEDQPIHLIL------KNKKIP----IHINFSIYAGPEARYCPAGVYEF 513
++N+NH + + I KN+ I I + Y P P +Y +
Sbjct: 301 FMGKKINNLNHSILKKTNSIFITHKKEKNESISEKTCIRCGYCSYVCP-VNLLPQQLYWY 359
Query: 514 IIEKNKIQHLQINAQNCIHCKTCDIKDPT 542
I KN +Q + +CI CK C+ P+
Sbjct: 360 IKNKNHVQTKKHYVLDCIECKACEKVCPS 388
>sp|A8X2R1|L2HDH_CAEBR L-2-hydroxyglutarate dehydrogenase, mitochondrial
OS=Caenorhabditis briggsae GN=CBG06643 PE=3 SV=2
Length = 434
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Query: 17 PRESIE---YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
P++S+E YD++IVGGG G + A +QL I+K +KI ++EK EL H
Sbjct: 17 PKKSVELPKYDLVIVGGGIVGCATA---RQLLIEK-PNLKIALVEKEKELAVH 65
>sp|O17953|DLDH_CAEEL Dihydrolipoyl dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=dld-1 PE=2 SV=2
Length = 495
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIF 79
+ D++++GGGP G AAI+ QL +K +CV EK + LG L+ I +++
Sbjct: 29 DADLVVIGGGPGGYVAAIKAAQLGMK-----TVCV-EKNATLGGTCLNVGCIPSKALL 80
>sp|A7SMW7|L2HDH_NEMVE L-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Nematostella
vectensis GN=v1g172254 PE=3 SV=1
Length = 456
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 20 SIEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
S YDV IVGGG GL+ A L I ++ ++ CVLEK EL H
Sbjct: 37 SEHYDVAIVGGGIVGLATAREL----ILRHPKLTFCVLEKEKELSMH 79
>sp|A5UNX8|GGR_METS3 Digeranylgeranylglycerophospholipid reductase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_1701
PE=3 SV=1
Length = 393
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 45/198 (22%)
Query: 21 IEYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAHILSGAIIDPRSIFE 80
IE DV+++GGGP+G SAA K A+ K+ +L+K SE+GA P+ E
Sbjct: 2 IETDVLVIGGGPAGSSAA---KHAALGGA---KVILLDKRSEIGA---------PKRCAE 46
Query: 81 LFPKEKLNKLFNTP-----VIEERFLFLSSKKSYKIPSWILPICFK-NHGNYIISLSDLV 134
K+ L KL P E + L+S + W+ + YI+
Sbjct: 47 GVSKKGLAKLGIEPSPRWITKEIDGVRLTSPDGTDV--WLTEEEIELPEAGYILERKVFD 104
Query: 135 RWMGKKAENMGIDIFSGFSASEILYDSKNNVCGIATNNFGINK--EGIIKKNFQLGM--E 190
+ M A G +I I T G++K +G I +G E
Sbjct: 105 KHMAMDAARAGAEIR------------------IKTLATGMDKIEDGFIVSTESMGKTEE 146
Query: 191 LYAKYTLFAEGSRGHLSK 208
+ AK + A+G GH+++
Sbjct: 147 IKAKIVIAADGPEGHVAR 164
>sp|Q795R8|YTFP_BACSU Uncharacterized protein YtfP OS=Bacillus subtilis (strain 168)
GN=ytfP PE=4 SV=2
Length = 420
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
Query: 22 EYDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELG 64
+YDVI++GGGPSGL AAI + + + +++KG++LG
Sbjct: 3 QYDVIVIGGGPSGLMAAIAAGE------QGAGVLLIDKGNKLG 39
>sp|Q9N4Z0|L2HDH_CAEEL L-2-hydroxyglutarate dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=Y45G12B.3 PE=3 SV=2
Length = 433
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 17 PRESIE---YDVIIVGGGPSGLSAAIRLKQLAIKKNKEIKICVLEKGSELGAH 66
P++S++ YD++IVGGG G + A +QL I+K ++K+ ++EK EL H
Sbjct: 17 PKKSVDLPKYDLVIVGGGIVGCATA---RQLLIEK-PQLKVALIEKEKELAVH 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,226,078
Number of Sequences: 539616
Number of extensions: 10505283
Number of successful extensions: 26191
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 25993
Number of HSP's gapped (non-prelim): 240
length of query: 561
length of database: 191,569,459
effective HSP length: 123
effective length of query: 438
effective length of database: 125,196,691
effective search space: 54836150658
effective search space used: 54836150658
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)