Query psy14498
Match_columns 171
No_of_seqs 208 out of 1267
Neff 8.2
Searched_HMMs 13730
Date Fri Aug 16 21:19:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14498.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14498hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qvca_ b.40.4.3 (A:) ssDNA-bi 100.0 9E-36 6.6E-40 215.9 17.9 111 3-113 4-117 (145)
2 d3ulla_ b.40.4.3 (A:) ssDNA-bi 100.0 8.4E-35 6.1E-39 203.1 12.9 106 3-108 4-115 (115)
3 d1ue1a_ b.40.4.3 (A:) ssDNA-bi 100.0 2E-32 1.4E-36 191.8 16.3 107 3-109 1-108 (118)
4 d1se8a_ b.40.4.3 (A:) ssDNA-bi 100.0 5.6E-32 4.1E-36 209.5 14.7 106 3-110 126-231 (231)
5 d1se8a_ b.40.4.3 (A:) ssDNA-bi 100.0 4.5E-31 3.3E-35 204.4 15.5 113 3-116 2-115 (231)
6 d1v1qa_ b.40.4.3 (A:) Primosom 100.0 7.6E-30 5.6E-34 176.5 11.8 105 3-113 5-109 (111)
7 d1jmca1 b.40.4.3 (A:183-298) R 97.2 0.00067 4.9E-08 45.0 7.6 67 3-83 11-81 (116)
8 d1o7ia_ b.40.4.3 (A:) Archaeal 95.5 0.02 1.5E-06 37.4 6.5 81 3-109 11-97 (115)
9 d1eova1 b.40.4.1 (A:71-204) As 94.0 0.48 3.5E-05 31.2 12.5 45 66-111 86-130 (134)
10 d1jmca2 b.40.4.3 (A:299-420) R 91.4 0.78 5.7E-05 29.6 8.6 69 6-88 18-89 (122)
11 d1b8aa1 b.40.4.1 (A:1-103) Asp 91.0 0.92 6.7E-05 28.4 8.4 80 5-110 17-100 (103)
12 d1ltla_ b.40.4.11 (A:) DNA rep 89.2 0.52 3.8E-05 34.1 6.8 51 51-108 189-239 (239)
13 d1c0aa1 b.40.4.1 (A:1-106) Asp 88.1 0.72 5.2E-05 29.1 6.1 56 51-110 42-104 (106)
14 d1wjja_ b.40.4.3 (A:) Hypothet 84.9 0.86 6.3E-05 30.5 5.4 42 51-104 72-113 (145)
15 d1l0wa1 b.40.4.1 (A:1-104) Asp 84.8 2.8 0.0002 26.1 7.6 55 53-111 45-103 (104)
16 d1e1oa1 b.40.4.1 (A:11-153) Ly 81.9 1.5 0.00011 29.2 5.6 77 6-110 56-137 (143)
17 d2pi2a1 b.40.4.3 (A:44-171) Re 73.0 4.3 0.00032 26.0 5.8 79 4-110 28-108 (128)
18 d1xjva2 b.40.4.3 (A:149-299) P 69.4 3.1 0.00022 27.9 4.4 33 53-86 69-102 (151)
19 d1n9wa1 b.40.4.1 (A:1-93) Aspa 68.8 7.1 0.00052 23.4 5.8 74 5-110 14-87 (93)
20 d1xjva1 b.40.4.3 (A:6-145) Pro 64.8 7.1 0.00052 25.5 5.5 70 6-89 17-86 (140)
21 d1gm5a2 b.40.4.9 (A:106-285) R 64.0 6.9 0.0005 26.2 5.5 65 6-88 62-128 (180)
22 d1nh2d2 b.56.1.1 (D:55-121) Sm 59.0 13 0.00094 21.1 5.6 29 74-108 4-32 (67)
23 d1umka1 b.43.4.2 (A:30-153) cy 57.3 6 0.00044 24.7 4.0 29 61-89 95-123 (124)
24 d1fnda1 b.43.4.2 (A:19-154) Fe 50.9 12 0.00089 24.0 4.7 22 59-81 111-132 (136)
25 d2cnda1 b.43.4.2 (A:11-124) Ni 49.9 23 0.0017 21.3 5.9 28 60-88 85-112 (114)
26 d1krha1 b.43.4.2 (A:106-205) B 49.6 9.1 0.00067 22.8 3.7 23 60-82 74-96 (100)
27 d1nvpd2 b.56.1.1 (D:54-99) Sma 49.5 15 0.0011 19.2 5.6 29 74-108 1-29 (46)
28 d1jb7a1 b.40.4.3 (A:36-204) Te 49.3 9.3 0.00068 25.8 4.0 82 5-88 15-96 (169)
29 d1nnxa_ b.40.10.1 (A:) Hypothe 48.7 17 0.0012 22.6 4.9 31 69-108 76-106 (106)
30 d1qzga_ b.40.4.3 (A:) Protecti 46.5 13 0.00095 25.1 4.4 74 5-88 37-112 (170)
31 d2isba1 c.8.9.1 (A:2-179) Fuma 44.9 10 0.00073 26.0 3.6 18 68-85 16-33 (178)
32 d2cqaa1 b.40.4.14 (A:8-89) Ruv 43.8 28 0.002 20.5 7.5 61 8-83 6-72 (82)
33 d1y7ma1 b.160.1.1 (A:49-164) H 42.9 10 0.00076 23.2 3.3 20 60-79 96-115 (116)
34 d1gvha2 b.43.4.2 (A:147-253) F 41.4 11 0.00081 22.7 3.2 22 60-81 81-102 (107)
35 d1cqxa2 b.43.4.2 (A:151-261) F 40.7 8.9 0.00065 23.3 2.6 22 60-81 84-105 (111)
36 d1zata1 b.160.1.1 (A:339-466) 39.7 14 0.001 22.6 3.6 23 56-78 105-127 (128)
37 d1vqoj1 c.21.1.1 (J:4-145) Rib 36.9 7 0.00051 25.8 1.6 21 59-79 16-36 (142)
38 d1tvca1 b.43.4.2 (A:2-110) Met 36.1 11 0.0008 22.9 2.5 23 60-82 85-107 (109)
39 d1jb9a1 b.43.4.2 (A:6-162) Fer 33.7 31 0.0023 22.6 4.7 21 62-82 128-148 (157)
40 d1j3aa_ c.21.1.1 (A:) Ribosoma 32.3 9.1 0.00067 25.1 1.6 21 59-79 11-31 (142)
41 d1htwa_ c.37.1.18 (A:) Hypothe 31.0 10 0.00074 25.3 1.7 22 62-83 17-43 (158)
42 d2pp6a1 b.106.1.2 (A:1-93) Gif 30.5 22 0.0016 21.5 3.1 30 70-99 61-91 (93)
43 d1e32a1 b.52.2.3 (A:21-106) Me 29.1 16 0.0011 21.7 2.2 12 70-81 31-42 (86)
44 d2bmwa1 b.43.4.2 (A:9-141) Fer 29.1 20 0.0015 22.6 2.9 22 60-82 107-128 (133)
45 d1fdra1 b.43.4.2 (A:2-100) Fer 29.0 15 0.0011 21.9 2.2 21 60-81 72-92 (99)
46 d2j0td1 b.40.3.1 (D:1-124) TIM 28.8 51 0.0037 20.2 5.0 70 6-83 16-90 (124)
47 d2vgna1 b.38.4.1 (A:1-135) Dom 27.0 49 0.0035 21.1 4.6 53 53-108 17-75 (135)
48 d1i96v_ d.68.1.1 (V:) Translat 26.8 22 0.0016 21.0 2.6 28 61-88 18-45 (86)
49 d1fx0a2 b.49.1.1 (A:25-96) F1 26.5 43 0.0031 19.0 3.8 28 50-82 44-71 (72)
50 d1qfja1 b.43.4.2 (A:1-97) NAD( 25.4 5.9 0.00043 23.8 -0.4 23 60-82 70-92 (97)
51 d1skyb2 b.49.1.1 (B:21-95) F1 24.9 59 0.0043 18.5 5.4 28 50-82 47-74 (75)
52 d2jdia2 b.49.1.1 (A:24-94) F1 24.7 45 0.0033 18.9 3.6 28 50-82 44-71 (71)
53 d1p3da2 c.59.1.1 (A:322-473) U 24.0 28 0.002 21.6 3.0 24 58-81 115-138 (152)
54 d1ep3b1 b.43.4.2 (B:2-102) Dih 23.9 36 0.0026 19.8 3.4 20 63-82 78-97 (101)
55 d1tiga_ d.68.1.1 (A:) Translat 23.4 23 0.0017 21.0 2.2 27 62-88 20-46 (88)
56 d2d6fa1 b.38.3.1 (A:2-73) Glut 21.5 34 0.0025 19.5 2.6 21 59-79 3-24 (72)
57 d1pkla1 b.58.1.1 (A:88-186) Py 21.4 37 0.0027 20.1 3.0 24 65-88 43-67 (99)
58 d2ifea_ d.68.1.1 (A:) Translat 20.6 18 0.0013 21.7 1.2 30 61-90 20-49 (91)
No 1
>d1qvca_ b.40.4.3 (A:) ssDNA-binding protein {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=9e-36 Score=215.89 Aligned_cols=111 Identities=59% Similarity=1.113 Sum_probs=103.7
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
+||+|+|+|||++||++|++++|+.+++|+||+++++++..+|++.+.++||+|++||++|+.+.++|+||++|+|+|+|
T Consensus 4 ~mN~v~LiG~l~~dpe~r~~~~G~~v~~f~va~~~~~~~~~~~~~~~~t~w~~v~~~g~~Ae~~~~~l~KG~~V~V~G~l 83 (145)
T d1qvca_ 4 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQL 83 (145)
T ss_dssp CEEEEEEEEEESSCCEEECCSSSCCEEEEEEEECCCCSCCSSSSCCCCCEEEEEEEETHHHHHHHHHCCTTCEEEEEEEE
T ss_pred cceEEEEEEECCCCCEEEECCCCCEEEEEEEEecccccccccccccccceEEeeEEecchhhhHhhhcccCCEEEEEEEE
Confidence 79999999999999999999999999999999999998877678888999999999999999999999999999999999
Q ss_pred eeeeeecCCCcEEEEEEEEEe---EEEEccCCCC
Q psy14498 83 QTRKWTNKEGVEKYITEVIAD---NMQMLGSRKN 113 (171)
Q Consensus 83 ~~~~~~~kdG~~~~~~~i~a~---~i~~l~~~~~ 113 (171)
+++.|+++||++++.++|+|+ .|.+|.++..
T Consensus 84 ~~~~~~~kdG~~r~~~ei~~~~~~~l~~l~~r~~ 117 (145)
T d1qvca_ 84 RTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQG 117 (145)
T ss_dssp EEEEECSSSSCEEEEEEEECTTCEEEECCCCSCC
T ss_pred EEeeeECCCCCEEEEEEEEEecCCcEEECcCccC
Confidence 999999999999999999997 6677766543
No 2
>d3ulla_ b.40.4.3 (A:) ssDNA-binding protein {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=100.00 E-value=8.4e-35 Score=203.06 Aligned_cols=106 Identities=40% Similarity=0.745 Sum_probs=97.7
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCC-----CCeeeeeceEEEEEEEhH-HHHHHHHHcCCCCEE
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKN-----SGEKRELTEWHRITFYRK-LAQIVKQYLKKGSQI 76 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~-----~G~~~~~~~~~~v~~~g~-~A~~~~~~l~kG~~V 76 (171)
+||+|+|+|||++||++|++++|+++|+|+||+++++++.+ +|++.+.++||+|++||+ +|+.+.++|+||++|
T Consensus 4 ~mN~V~L~G~l~~dpe~r~t~~G~~v~~f~vAv~~~~~~~~~~~~~~g~~~~~t~w~~v~~~g~~~a~~~~~~l~KG~~V 83 (115)
T d3ulla_ 4 SLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRI 83 (115)
T ss_dssp CEEEEEEEEEECSCCEEECCTTSCCEEEEEEEEEEEECC---------CCEEEEEEEEEEECSTTHHHHHHHHCCTTCEE
T ss_pred ceeEEEEEEECCCCCEEEEeCCCCEEEEEEEEcccccccccccccccccceeeeeeeeeeeeecccchhhhhhccCCCEE
Confidence 89999999999999999999999999999999999998764 356777899999999987 788889999999999
Q ss_pred EEEeEeeeeeeecCCCcEEEEEEEEEeEEEEc
Q psy14498 77 YIEGRLQTRKWTNKEGVEKYITEVIADNMQML 108 (171)
Q Consensus 77 ~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l 108 (171)
+|+|+|++++|+|+||++++.++|+|++|.||
T Consensus 84 ~V~Grl~~~~~~dkdG~~r~~~~v~a~~i~~L 115 (115)
T d3ulla_ 84 YLEGKIDYGEYMDKNNVRRQATTIIADNIIFL 115 (115)
T ss_dssp EEEEEEECCCEESSSSEECCCEEEEEEEEECC
T ss_pred EEEEEEeeeeEECCCCCEEEEEEEEEEEEEeC
Confidence 99999999999999999999999999999987
No 3
>d1ue1a_ b.40.4.3 (A:) ssDNA-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=2e-32 Score=191.75 Aligned_cols=107 Identities=30% Similarity=0.534 Sum_probs=96.4
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeee-eceEEEEEEEhHHHHHHHHHcCCCCEEEEEeE
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRE-LTEWHRITFYRKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~-~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
+.|+|+|+|||++||++|++++|+++|+|+||++++++++++|+|.+ .++||+|++||++|+.++++|+||++|+|+|+
T Consensus 1 g~N~V~L~G~l~~dpe~r~~~~G~~v~~f~lA~~~~~~~~~~~~~~~~~t~~~~v~~~g~~Ae~~~~~l~KG~~V~V~G~ 80 (118)
T d1ue1a_ 1 GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGR 80 (118)
T ss_dssp CCCEEEEEEEESSCCEEEECTTSCEEEEEEEEECCCCCC-----CCCCCCEEEEEEEEHHHHHHHHHHCCTTCEEEEEEE
T ss_pred CcCEEEEEEEcCcCCEEEECCCCCEEEEEEEEecccccccCCCcccccceeeEEEEeChHHHHHHHHhccCCCEEEEEeE
Confidence 46999999999999999999999999999999999998877677765 68999999999999999999999999999999
Q ss_pred eeeeeeecCCCcEEEEEEEEEeEEEEcc
Q psy14498 82 LQTRKWTNKEGVEKYITEVIADNMQMLG 109 (171)
Q Consensus 82 l~~~~~~~kdG~~~~~~~i~a~~i~~l~ 109 (171)
|++++|+|++|++++.++|+|++|...-
T Consensus 81 L~~~~~~~~dG~~r~~~~v~a~~vg~~l 108 (118)
T d1ue1a_ 81 LKQRSFETREGEKRTVIEVEVDEIGPSL 108 (118)
T ss_dssp EEEEEECSSSSSCEEEEEEEEEEEEECC
T ss_pred eeeceEECCCCCEEEEEEEEEEEecccc
Confidence 9999999999999999999999996643
No 4
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=99.97 E-value=5.6e-32 Score=209.50 Aligned_cols=106 Identities=39% Similarity=0.707 Sum_probs=95.6
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
.||+|+|+|+|++||++|++++|.++|+|+||++++|++++ |++.++++||+|++||++|+.+ .+|+||+.|+|+|+|
T Consensus 126 ~~N~v~l~G~l~~dpe~r~t~~G~~~~~f~va~~~~~~~~~-g~~~~~t~~~~v~~~g~~Ae~~-~~l~KG~~V~V~G~l 203 (231)
T d1se8a_ 126 AMNEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQ-GQRQEKVHYIDATLWRDLAENM-KELRKGDPVMIMGRL 203 (231)
T ss_dssp CEEEEEEEEEECSCCEEEECTTCCEEEEEEEEEEEEEECTT-SCEEEEEEEEEEEEETHHHHHH-TTCCTTCEEEEEEEE
T ss_pred cceeEEEEEEeCCCcEEEECCCCCEEEEEEEEECCCeECCC-CceeeeeEEEEeEecCcHHHHh-hhCCCCCEEEEEEEe
Confidence 79999999999999999999999999999999999999986 9888889999999999999987 479999999999999
Q ss_pred eeeeeecCCCcEEEEEEEEEeEEEEccC
Q psy14498 83 QTRKWTNKEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 83 ~~~~~~~kdG~~~~~~~i~a~~i~~l~~ 110 (171)
++++|+|+||++++.++|+|++|+||++
T Consensus 204 ~~~~~~~kdG~~r~~~~i~a~~v~~L~r 231 (231)
T d1se8a_ 204 VNEGWTDKDGNKRNSTRVEATRVEALAR 231 (231)
T ss_dssp EEEECC------CEEEEEEEEEEEECCC
T ss_pred EeceEECCCCCEEEEEEEEEEEEEEccC
Confidence 9999999999999999999999999964
No 5
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=99.97 E-value=4.5e-31 Score=204.36 Aligned_cols=113 Identities=34% Similarity=0.556 Sum_probs=95.0
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHH-HHcCCCCEEEEEeE
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVK-QYLKKGSQIYIEGR 81 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~-~~l~kG~~V~V~G~ 81 (171)
.||+|+|+|+|++||++|++++|+++++|+||+++++++.+ |++.+.++||+|++||++|+.++ .+|+||+.|+|+|+
T Consensus 2 ~mN~v~l~G~l~~dpe~r~t~~G~~~~~f~lA~~~~~~~~~-g~~~~~t~~~~v~~~g~~Ae~~~~~~l~KG~~V~V~G~ 80 (231)
T d1se8a_ 2 GMNHVYLIGALARDPELRYTGNGMAVFEATVAGEDRVIGND-GRERNLPWYHRVSILGKPAEWQAERNLKGGDAVVVEGT 80 (231)
T ss_dssp CEEEEEEEEEESSCCEEEECTTSCEEEEEEEEEEEEC--------CEEEEEEEEEEESHHHHHHHHTCCCTTCEEEEEEE
T ss_pred CccEEEEEEEECcCCEEEECCCCCEEEEEEEEECCcEECCC-CCEEeeeeeeeEEEeCchhhhhhhhccCCCCEEEEEEE
Confidence 69999999999999999999999999999999999998875 88878899999999999999876 57999999999999
Q ss_pred eeeeeeecCCCcEEEEEEEEEeEEEEccCCCCCCC
Q psy14498 82 LQTRKWTNKEGVEKYITEVIADNMQMLGSRKNTNE 116 (171)
Q Consensus 82 l~~~~~~~kdG~~~~~~~i~a~~i~~l~~~~~~~~ 116 (171)
|++++|+++||++++.++|+|++|+||+++.+..+
T Consensus 81 l~~~~~~~~dG~~r~~~~i~a~~v~~l~~~~~~~~ 115 (231)
T d1se8a_ 81 LEYRQWEAPEGGKRSAVNVKALRMEQLGTQPELIQ 115 (231)
T ss_dssp EEEEEEC-----CEEEEEEEEEEEEECSSCCCEEE
T ss_pred EEeeeeECCCCCEEEEEEEEEEEEEEccCCccccc
Confidence 99999999999999999999999999998875433
No 6
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=99.96 E-value=7.6e-30 Score=176.52 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=93.7
Q ss_pred CccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 3 SVNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
|+|+|+|+|+|++||++|+|++|.++|+|+|++++.+++. |++++.++||+|++||++|+.++++|+||+.|+|+|+|
T Consensus 5 m~N~v~L~G~l~~dpelr~T~~G~~v~~f~la~~~~~~e~--~~~r~~~~~i~vv~~g~~Ae~~~~~l~kG~~v~v~G~L 82 (111)
T d1v1qa_ 5 MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEA--GFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFI 82 (111)
T ss_dssp CCEEEEEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEESTGGGGGGTTCCTTCEEEEEEEE
T ss_pred ceEEEEEEEEecCCcceEECCCCCEEEEEEEEeccEEecc--cceEEEEEEEEEEEeCHHHHHHHHHhcCCCEEEEEEEE
Confidence 6899999999999999999999999999999998877664 77777888999999999999999999999999999999
Q ss_pred eeeeeecCCCcEEEEEEEEEeEEEEccCCCC
Q psy14498 83 QTRKWTNKEGVEKYITEVIADNMQMLGSRKN 113 (171)
Q Consensus 83 ~~~~~~~kdG~~~~~~~i~a~~i~~l~~~~~ 113 (171)
++++|+++++ + +.|+|++|+||+++.+
T Consensus 83 ~~~~~~~~~~--r--~v~~a~~ie~l~s~~~ 109 (111)
T d1v1qa_ 83 SCHKAKNGLS--K--MVLHAEQIELIDSVDK 109 (111)
T ss_dssp EEECTTTTSC--E--EEEEEEEEEETTSCSC
T ss_pred EEecccCCCC--E--EEEEEEEEEEecCCCc
Confidence 9999964443 3 3588999999987754
No 7
>d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22 E-value=0.00067 Score=44.98 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=50.1
Q ss_pred CccEEEEEEEeCCCCeEEEec--CCc-EEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEE
Q psy14498 3 SVNKVIIIGNLGRDPETRYMS--NGD-AVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIE 79 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~--~g~-~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~ 79 (171)
+++.++|.|||.+--++|.+. +|. .+..+.|+ |. +| + +++++|+++|+.+...|+.|+.+.|+
T Consensus 11 ~~~~~~I~~RV~~k~~~r~f~~~~~~g~v~~~~l~------De-~G------~-I~~t~~~~~~~~f~~~l~~G~vy~i~ 76 (116)
T d1jmca1 11 YQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELV------DE-SG------E-IRATAFNEQVDKFFPLIEVNKVYYFS 76 (116)
T ss_dssp TCCCCEEEEEEEEECCCEEEECSSCEEEEEEEEEE------CS-SC------E-EEEEEEHHHHHHHGGGCCTTCEEEEE
T ss_pred CCCCEEEEEEEEEeccceEEECCCCCceEEEEEEE------cC-CC------C-EEEEEchhhhhhhHhhcccCCEEEEc
Confidence 578899999999876666554 332 45555544 22 24 2 69999999999999999999999999
Q ss_pred e-Eee
Q psy14498 80 G-RLQ 83 (171)
Q Consensus 80 G-~l~ 83 (171)
+ +++
T Consensus 77 ~~~V~ 81 (116)
T d1jmca1 77 KGTLK 81 (116)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 7 444
No 8
>d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=95.51 E-value=0.02 Score=37.41 Aligned_cols=81 Identities=20% Similarity=0.286 Sum_probs=51.7
Q ss_pred CccEEEEEEEeCCCCeEEEec--CCc-EEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEE
Q psy14498 3 SVNKVIIIGNLGRDPETRYMS--NGD-AVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIE 79 (171)
Q Consensus 3 ~~N~v~l~G~l~~dp~~~~~~--~g~-~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~ 79 (171)
++..|.|+|+|.+--++|.+. +|. .++++.| .. +|-.+++++|++.|+ .|.+|+.|.|+
T Consensus 11 g~~~v~i~~~V~~~~~~r~~~~~~g~~~v~~~~i--~D------------eTG~i~~~~W~~~~~----~l~~Gdvv~i~ 72 (115)
T d1o7ia_ 11 NMESVNVTVRVLEASEARQIQTKNGVRTISEAIV--GD------------ETGRVKLTLWGKHAG----SIKEGQVVKIE 72 (115)
T ss_dssp TCSSEEEEEEEEEECCCEEECCTTCCEEEEEEEE--EE------------TTEEEEEEEEGGGTT----CCCTTCEEEEE
T ss_pred CCCCEEEEEEEEECCCCceeecCCCCEEEEEEEE--Ec------------CCCeEEEEEeccccc----cCCCCCEEEEe
Confidence 466799999999876666653 443 3333333 22 244589999998664 48999999998
Q ss_pred eEeeeeeeecCCCcEEEEEEEEEe---EEEEcc
Q psy14498 80 GRLQTRKWTNKEGVEKYITEVIAD---NMQMLG 109 (171)
Q Consensus 80 G~l~~~~~~~kdG~~~~~~~i~a~---~i~~l~ 109 (171)
+- ..+.|. | .++|.+. .|+.+.
T Consensus 73 na-~v~~~~---g----~~el~~~~~s~i~~~~ 97 (115)
T d1o7ia_ 73 NA-WTTAFK---G----QVQLNAGSKTKIAEAS 97 (115)
T ss_dssp EE-EEEEET---T----EEEEEECTTCEEEECC
T ss_pred eE-EEEEEC---C----eEEEEECCCeEEEECC
Confidence 64 223463 2 3456654 355554
No 9
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.96 E-value=0.48 Score=31.23 Aligned_cols=45 Identities=9% Similarity=0.032 Sum_probs=34.9
Q ss_pred HHHHcCCCCEEEEEeEeeeeeeecCCCcEEEEEEEEEeEEEEccCC
Q psy14498 66 VKQYLKKGSQIYIEGRLQTRKWTNKEGVEKYITEVIADNMQMLGSR 111 (171)
Q Consensus 66 ~~~~l~kG~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l~~~ 111 (171)
.+++|..|+.|.|+|.+..+.-.. .+.+.-.+||.+++|.+|...
T Consensus 86 ~~~~l~~es~V~V~G~v~~~~~~~-~~~~~~~~Ei~v~~i~vls~a 130 (134)
T d1eova1 86 WAGSLNLESIVLVRGIVKKVDEPI-KSATVQNLEIHITKIYTISET 130 (134)
T ss_dssp HHTTCCTTCEEEEEEEEEECSSCC-TTSSEEEEEEEEEEEEEEECC
T ss_pred HHhcCCCCCEEEEEEEEEeCCccC-CCCCCCcEEEEEEEEEEEeCC
Confidence 346799999999999997665432 344556899999999999654
No 10
>d1jmca2 b.40.4.3 (A:299-420) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.38 E-value=0.78 Score=29.63 Aligned_cols=69 Identities=19% Similarity=0.191 Sum_probs=46.0
Q ss_pred EEEEEEEeCCCCeEEE--ec-CCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 6 KVIIIGNLGRDPETRY--MS-NGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 6 ~v~l~G~l~~dp~~~~--~~-~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
.|-|+|.|..-=+++. ++ .|+...+..|.+... +| .-++|++||+.|+.+. ...+..|.+.| +
T Consensus 18 ~vDViGvv~~v~~~~~i~~k~~g~~~~kR~i~i~D~-----t~------~~i~vtLWg~~a~~~~--~~~~~Vi~~k~-~ 83 (122)
T d1jmca2 18 LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDT-----SG------KVVTATLWGEDADKFD--GSRQPVLAIKG-A 83 (122)
T ss_dssp EEEEEEEEEEECCCEEEEETTTTEEEEEEEEEEECT-----TC------CEEEEEEEHHHHHHCC--CTTCCEEEEEE-E
T ss_pred eEEEEEEEEEccCcEEEEEcCCCCceeEEEEEEEcC-----CC------CEEEEEEEchHhhhhC--CCCCCEEEEee-e
Confidence 4778898886433322 33 577777777766542 12 2579999999998753 46788888877 5
Q ss_pred eeeeee
Q psy14498 83 QTRKWT 88 (171)
Q Consensus 83 ~~~~~~ 88 (171)
+...|.
T Consensus 84 ~v~~~~ 89 (122)
T d1jmca2 84 RVSDFG 89 (122)
T ss_dssp EEECTT
T ss_pred EEeecc
Confidence 556773
No 11
>d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=90.98 E-value=0.92 Score=28.41 Aligned_cols=80 Identities=19% Similarity=0.211 Sum_probs=50.2
Q ss_pred cEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHH----HHHHHHHcCCCCEEEEEe
Q psy14498 5 NKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKL----AQIVKQYLKKGSQIYIEG 80 (171)
Q Consensus 5 N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~----A~~~~~~l~kG~~V~V~G 80 (171)
.+|.|.|+|-+ +|.. |+ ++-+.| -+ .+-.+.|++-.+. .-...+.|..|+.|.|+|
T Consensus 17 ~~V~v~Gwv~~---~R~~--g~-i~Fi~L-rD-------------~sg~iQ~v~~~~~~~~~~~~~~~~l~~es~v~V~G 76 (103)
T d1b8aa1 17 QKVKVAGWVWE---VKDL--GG-IKFLWI-RD-------------RDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEG 76 (103)
T ss_dssp CEEEEEEEEEE---EEEE--TT-EEEEEE-EE-------------TTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CEEEEEEEEeh---hccC--CC-cEEEEE-Ec-------------CCEeeeEEEeccccchhhhhHHhhCCcceEEEEEE
Confidence 46888888865 4433 33 332222 11 1334788876442 122334699999999999
Q ss_pred EeeeeeeecCCCcEEEEEEEEEeEEEEccC
Q psy14498 81 RLQTRKWTNKEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 81 ~l~~~~~~~kdG~~~~~~~i~a~~i~~l~~ 110 (171)
.+..+.-. +.| +||.+++|++|..
T Consensus 77 ~v~~~~~~-~~~-----iEi~v~~i~ils~ 100 (103)
T d1b8aa1 77 VVNFTPKA-KLG-----FEILPEKIVVLNR 100 (103)
T ss_dssp EEEECTTS-TTS-----EEEEEEEEEEEEC
T ss_pred EEEECCCC-Ccc-----EEEEeeEEEEEEe
Confidence 99765421 222 7999999999964
No 12
>d1ltla_ b.40.4.11 (A:) DNA replication initiator (cdc21/cdc54) N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=89.25 E-value=0.52 Score=34.11 Aligned_cols=51 Identities=16% Similarity=0.275 Sum_probs=39.0
Q ss_pred ceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEeeeeeeecCCCcEEEEEEEEEeEEEEc
Q psy14498 51 TEWHRITFYRKLAQIVKQYLKKGSQIYIEGRLQTRKWTNKEGVEKYITEVIADNMQML 108 (171)
Q Consensus 51 ~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l 108 (171)
+..+.|++.++++.. ++.||.|.|.|-++...- .+...+...|.|..|++|
T Consensus 189 Pr~i~v~l~~dlvd~----~~pGd~V~i~GI~~~~~~---~~~~~~~~~i~a~~Ie~l 239 (239)
T d1ltla_ 189 PRQITVVLEDDLVDT----LTPGDIVRVTGTLRTVRD---ERTKRFKNFIYGNYTEFL 239 (239)
T ss_dssp CCEEEEEEEGGGTTC----CCTTCEEEEEEEEEEEEE---TTTTEEEEEEEEEECCBC
T ss_pred CcEEEEEEeccccCc----cCCCCEEEEEEEEEEeec---CCCCceEEEEEEEEEEEC
Confidence 678899999988754 999999999999976532 222356677888888765
No 13
>d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=88.06 E-value=0.72 Score=29.15 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=39.2
Q ss_pred ceEEEEEEEhHHHH--HHHHHcCCCCEEEEEeEeeeeeeec-----CCCcEEEEEEEEEeEEEEccC
Q psy14498 51 TEWHRITFYRKLAQ--IVKQYLKKGSQIYIEGRLQTRKWTN-----KEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 51 ~~~~~v~~~g~~A~--~~~~~l~kG~~V~V~G~l~~~~~~~-----kdG~~~~~~~i~a~~i~~l~~ 110 (171)
+-.+.|++..+..+ .+.+.|..++.|.|+|.+..+.-.. +.| .+||.+++|++|..
T Consensus 42 ~G~~Q~v~~~~~~~~~~~~~~l~~Es~v~V~G~V~~r~~~~~n~~~~tg----~iEi~v~~i~vl~~ 104 (106)
T d1c0aa1 42 EGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATG----EIEVLASSLTIINR 104 (106)
T ss_dssp TEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEEEECCTTTCCTTSTTT----TEEEEEEEEEEEEC
T ss_pred CeEEeEEecccchhHHHHHHhhCccceEEEEeEEeccCccccCCCCCCC----cEEEEEeEEEEEeC
Confidence 44678888765333 3345599999999999998664321 123 26999999999964
No 14
>d1wjja_ b.40.4.3 (A:) Hypothetical protein At4g28440 (F20O9.120) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=84.91 E-value=0.86 Score=30.47 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=30.3
Q ss_pred ceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEeeeeeeecCCCcEEEEEEEEEeE
Q psy14498 51 TEWHRITFYRKLAQIVKQYLKKGSQIYIEGRLQTRKWTNKEGVEKYITEVIADN 104 (171)
Q Consensus 51 ~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~ 104 (171)
|--+++.+|++.++ .|+.|+.|.|++-... .|. | .++|.+.+
T Consensus 72 TG~i~~tlW~~~~~----~l~~Gd~v~i~na~v~-~~~---G----~~~L~vg~ 113 (145)
T d1wjja_ 72 TGCILFTARNDQVD----LMKPGATVILRNSRID-MFK---G----TMRLGVDK 113 (145)
T ss_dssp SCEEEEEECTTHHH----HTCTTCEEEEEEEEEE-EET---T----EEEEEECT
T ss_pred CCeEEEEEEecccc----ccCcCCEEEEeeEEEE-EEC---C----EEEEEECC
Confidence 55679999998775 3899999999985433 463 3 35677764
No 15
>d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=84.79 E-value=2.8 Score=26.12 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=37.7
Q ss_pred EEEEEEEhH-HHHHHHHHcCCCCEEEEEeEeeeeeeecC---CCcEEEEEEEEEeEEEEccCC
Q psy14498 53 WHRITFYRK-LAQIVKQYLKKGSQIYIEGRLQTRKWTNK---EGVEKYITEVIADNMQMLGSR 111 (171)
Q Consensus 53 ~~~v~~~g~-~A~~~~~~l~kG~~V~V~G~l~~~~~~~k---dG~~~~~~~i~a~~i~~l~~~ 111 (171)
.+.|++-.. .+-...+.|..++.|.|+|.++.+.=.++ .| .+||.+++|++|...
T Consensus 45 ~iQ~v~~~~~~~~~~~~~l~~Es~I~V~G~V~~r~~~n~~~~tG----~iEi~v~~i~iL~~a 103 (104)
T d1l0wa1 45 LVQLVAHPASPAYATAERVRPEWVVRAKGLVRLRPEPNPRLATG----RVEVELSALEVLAEA 103 (104)
T ss_dssp EEEEEECTTSTTHHHHTTCCTTCEEEEEEEEEECSSCCTTSTTT----TEEEEEEEEEEEECC
T ss_pred ceEEecccchhHHHHHhhcCcccEEEEEEEEeeCCccCCCCCCC----CEEEEEeEEEEEEcC
Confidence 466776543 22234556999999999999986652221 23 369999999999653
No 16
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=81.94 E-value=1.5 Score=29.16 Aligned_cols=77 Identities=18% Similarity=0.252 Sum_probs=48.5
Q ss_pred EEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhH-----HHHHHHHHcCCCCEEEEEe
Q psy14498 6 KVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRK-----LAQIVKQYLKKGSQIYIEG 80 (171)
Q Consensus 6 ~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~-----~A~~~~~~l~kG~~V~V~G 80 (171)
.|+|.|||.. +|.. |+ ++-+.|. +. +| -+.|.+-.+ .-..+.+.|..||.|.|+|
T Consensus 56 ~V~vaGRI~~---~R~~--Gk-~~F~~i~-D~------~g-------~iQi~~~~~~~~~~~~~~~~k~ld~GDiIgv~G 115 (143)
T d1e1oa1 56 EVSVAGRMMT---RRIM--GK-ASFVTLQ-DV------GG-------RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARG 115 (143)
T ss_dssp EEEEEEEEEE---EEEE--TT-EEEEEEE-ET------TE-------EEEEEEETTTSSTTHHHHTGGGCCTTCEEEEEE
T ss_pred eEEEEEEEEE---Eccc--CC-eeEEEEE-eC------Cc-------eEEEEEccccchhhhHHHHHhcCCcccEEEeec
Confidence 6889999975 4443 43 3333332 11 13 234444321 2333456799999999999
Q ss_pred EeeeeeeecCCCcEEEEEEEEEeEEEEccC
Q psy14498 81 RLQTRKWTNKEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 81 ~l~~~~~~~kdG~~~~~~~i~a~~i~~l~~ 110 (171)
.+... +.|+ ++|.|.++.+|..
T Consensus 116 ~~~~T----ktGE----lsi~~~~~~lLsK 137 (143)
T d1e1oa1 116 TLFKT----QTGE----LSIHCTELRLLTK 137 (143)
T ss_dssp EEEEC----TTCC----EEEEEEEEEEEEC
T ss_pred ccEEC----CCCc----EEEEeeEEEEecc
Confidence 98533 5676 6799999999864
No 17
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.01 E-value=4.3 Score=25.99 Aligned_cols=79 Identities=10% Similarity=0.161 Sum_probs=45.6
Q ss_pred ccEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhH--HHHHHHHHcCCCCEEEEEeE
Q psy14498 4 VNKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRK--LAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 4 ~N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~--~A~~~~~~l~kG~~V~V~G~ 81 (171)
++.|.|+|.|.+ +.... ..+.|+| ++ . ||. -+.|..|-. ....-...+..|+.|.|.|+
T Consensus 28 v~~V~iVG~V~~---i~~~~---t~~~y~i--dD----g-TG~------~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~ 88 (128)
T d2pi2a1 28 ISQVTIVGIIRH---AEKAP---TNIVYKI--DD----M-TAA------PMDVRQWVDTDDTSSENTVVPPETYVKVAGH 88 (128)
T ss_dssp ESEEEEEEEEEE---EEECS---SEEEEEE--EC----S-SSS------CEEEEEECC-------CCCCCTTCEEEEEEE
T ss_pred EEEEEEEEEEEE---EEecC---CEEEEEE--EC----C-CCC------cEEEEEECCCCCCccccccccCCCEEEEEEE
Confidence 467888888875 32221 2344544 22 1 342 256777732 22223345999999999999
Q ss_pred eeeeeeecCCCcEEEEEEEEEeEEEEccC
Q psy14498 82 LQTRKWTNKEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 82 l~~~~~~~kdG~~~~~~~i~a~~i~~l~~ 110 (171)
|+ .|. |++ .|.+..|..+..
T Consensus 89 lk--~f~---~~~----~i~~~~i~~v~d 108 (128)
T d2pi2a1 89 LR--SFQ---NKK----SLVAFKIMPLED 108 (128)
T ss_dssp EE--EET---TEE----EEEEEEEEECSC
T ss_pred EE--eeC---CeE----EEEEEEEEEeCC
Confidence 97 442 322 477777877754
No 18
>d1xjva2 b.40.4.3 (A:149-299) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.42 E-value=3.1 Score=27.92 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=26.8
Q ss_pred EEEEEEEhHHHHHHHHHcCCCCEEEEEe-Eeeeee
Q psy14498 53 WHRITFYRKLAQIVKQYLKKGSQIYIEG-RLQTRK 86 (171)
Q Consensus 53 ~~~v~~~g~~A~~~~~~l~kG~~V~V~G-~l~~~~ 86 (171)
-++|++|++-++.+.+ |+.||.|.+.= +.+...
T Consensus 69 ~i~V~lyD~H~~~ar~-lK~GdfV~l~NVh~k~~~ 102 (151)
T d1xjva2 69 TIDILVYDNHVHVARS-LKVGSFLRIYSLHTKLQS 102 (151)
T ss_dssp SEEEEEETTHHHHHHH-CCTTCEEEEEEEEEEEEE
T ss_pred EEEEEEECchHHHHhh-CCCCCEEEEEEEEEEecc
Confidence 4899999999987766 99999999985 554444
No 19
>d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=68.83 E-value=7.1 Score=23.39 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=47.4
Q ss_pred cEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEeee
Q psy14498 5 NKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRLQT 84 (171)
Q Consensus 5 N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l~~ 84 (171)
.+|+|.|+|-+ +|. .|+ ++-+.| -+ | +..+.|++-.. +.+..|+.|.|+|.+..
T Consensus 14 ~~V~v~GwV~~---~R~--~gk-~~Fi~L-rD--------~-----sg~iQ~v~~~~------~~~~~e~~v~v~G~v~~ 67 (93)
T d1n9wa1 14 QEVELLGFLHW---RRD--LGR-IQFLLL-RD--------R-----SGVVQVVTGGL------KLPLPESALRVRGLVVE 67 (93)
T ss_dssp SEEEEEEEEEE---EEE--CSS-EEEEEE-EE--------T-----TEEEEEEEESC------CCCCTTCEEEEEEEEEE
T ss_pred CEEEEEEEEEe---EEe--CCC-cEEEEE-Ec--------C-----CccceEEeccc------cccccceEEEEEEEEEE
Confidence 36889999864 443 343 443333 21 1 33466665432 34788999999999976
Q ss_pred eeeecCCCcEEEEEEEEEeEEEEccC
Q psy14498 85 RKWTNKEGVEKYITEVIADNMQMLGS 110 (171)
Q Consensus 85 ~~~~~kdG~~~~~~~i~a~~i~~l~~ 110 (171)
+.- ..| .+||.+++|++|..
T Consensus 68 ~~~--~~~----~~Ei~v~~i~il~~ 87 (93)
T d1n9wa1 68 NAK--APG----GLEVQAKEVEVLSP 87 (93)
T ss_dssp CTT--STT----SEEEEEEEEEEEEC
T ss_pred CCC--CCC----CEEEEEeEEEEEec
Confidence 542 233 37999999999964
No 20
>d1xjva1 b.40.4.3 (A:6-145) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.76 E-value=7.1 Score=25.54 Aligned_cols=70 Identities=11% Similarity=0.087 Sum_probs=44.7
Q ss_pred EEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEeeee
Q psy14498 6 KVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRLQTR 85 (171)
Q Consensus 6 ~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l~~~ 85 (171)
.|.|+|-|..--..+.+....-++.|+|. +.+ ..-+.|.+|.+..+.+-.-.+.||.|.+.. ++.+
T Consensus 17 ~vnv~gVV~~~~~p~~s~g~D~~~tl~I~-D~S------------~~gl~v~iF~~~~~~LP~v~~~GDII~l~r-~~v~ 82 (140)
T d1xjva1 17 IVNVYGVVKFFKPPYLSKGTDYCSVVTIV-DQT------------NVKLTCLLFSGNYEALPIIYKNGDIVRFHR-LKIQ 82 (140)
T ss_dssp EEEEEEEEEEEEEEEECSSSSEEEEEEEE-CTT------------CCEEEEEEEESSGGGSCCCCSTTCEEEEEE-EEEE
T ss_pred EEEEEEEEeecCCCEEcCCCeEEEEEEEE-eCC------------CCCeEEEEECCChHHCCCCCCCCCEEEEEE-EEEE
Confidence 46788888766555555433355556653 222 124899999876666555345799999987 5666
Q ss_pred eeec
Q psy14498 86 KWTN 89 (171)
Q Consensus 86 ~~~~ 89 (171)
.|.+
T Consensus 83 ~~~~ 86 (140)
T d1xjva1 83 VYKK 86 (140)
T ss_dssp EETT
T ss_pred EECC
Confidence 7753
No 21
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=64.00 E-value=6.9 Score=26.22 Aligned_cols=65 Identities=15% Similarity=0.368 Sum_probs=38.1
Q ss_pred EEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHc--CCCCEEEEEeEee
Q psy14498 6 KVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYL--KKGSQIYIEGRLQ 83 (171)
Q Consensus 6 ~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l--~kG~~V~V~G~l~ 83 (171)
.+++.|+|.+ ...+.+. ++.. +.+.+.+ . +| -+.|+.|+.. .+...+ ..|+.|.|.|.++
T Consensus 62 ~vti~g~V~~-~~~~~~~-~~~~--~~~~v~D----~-~g-------~i~l~fFn~~--~~~~~~k~~~G~~v~v~Gkvk 123 (180)
T d1gm5a2 62 KVTTQGKIVS-VETKKFQ-NMNI--LTAVLSD----G-LV-------HVPLKWFNQD--YLQTYLKQLTGKEVFVTGTVK 123 (180)
T ss_dssp CCEEEECCCC-CEEEECS-SCEE--EEEEECC----S-SC-------CEEEEECSCC--TTHHHHHTTCSSCEEEEEEEC
T ss_pred eeeeeeEEEe-ecccccc-ccce--eEEEEEe----c-cc-------eEEEEEeCcH--HHHHHHhhhcCceEEEEEEEe
Confidence 4788999886 3444443 3333 3343332 1 23 3577878751 222323 4699999999998
Q ss_pred eeeee
Q psy14498 84 TRKWT 88 (171)
Q Consensus 84 ~~~~~ 88 (171)
...|.
T Consensus 124 ~~~~~ 128 (180)
T d1gm5a2 124 SNAYT 128 (180)
T ss_dssp SCCTT
T ss_pred ecccc
Confidence 76553
No 22
>d1nh2d2 b.56.1.1 (D:55-121) Small chain TOA2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=59.00 E-value=13 Score=21.15 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=24.7
Q ss_pred CEEEEEeEeeeeeeecCCCcEEEEEEEEEeEEEEc
Q psy14498 74 SQIYIEGRLQTRKWTNKEGVEKYITEVIADNMQML 108 (171)
Q Consensus 74 ~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l 108 (171)
.++.+.|.|.+.+|=|. .+.+++.+++|-
T Consensus 4 sKltfKG~L~TYRFCDn------VWTFiiknv~fk 32 (67)
T d1nh2d2 4 SKLTVKGNLDTYGFCDD------VWTFIVKNCQVT 32 (67)
T ss_dssp CEEEEEEEEEEEEEETT------EEEEEEEEEEEE
T ss_pred eeEEEEeeecceecccc------EEEEEEeeeEEE
Confidence 57899999999999864 888999988884
No 23
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.31 E-value=6 Score=24.66 Aligned_cols=29 Identities=10% Similarity=0.059 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCCEEEEEeEeeeeeeec
Q psy14498 61 KLAQIVKQYLKKGSQIYIEGRLQTRKWTN 89 (171)
Q Consensus 61 ~~A~~~~~~l~kG~~V~V~G~l~~~~~~~ 89 (171)
.....+...|+.||.|.|+|-+-.-.|.+
T Consensus 95 g~~s~~l~~l~~GD~v~v~gP~G~F~y~g 123 (124)
T d1umka1 95 GKMSQYLESMQIGDTIEFRGPSGLLVYQG 123 (124)
T ss_dssp CHHHHHHHHCCTTCEEEEEEEECSEEEEE
T ss_pred cchHHHHhcCCCCCEEEEECCeeeeEECC
Confidence 35566667799999999999877666654
No 24
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=50.92 E-value=12 Score=24.02 Aligned_cols=22 Identities=18% Similarity=0.332 Sum_probs=17.1
Q ss_pred EhHHHHHHHHHcCCCCEEEEEeE
Q psy14498 59 YRKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 59 ~g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
.|..-.++.+ |+.||.|.|.|-
T Consensus 111 ~G~~S~~L~d-Lk~GD~V~v~GP 132 (136)
T d1fnda1 111 KGVCSNFLCD-LKPGAEVKLTGP 132 (136)
T ss_dssp ECHHHHHHHT-CCTTCEEEEEEE
T ss_pred CceEehhhcc-CCCcCEEEEeCC
Confidence 3555666665 999999999995
No 25
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]}
Probab=49.91 E-value=23 Score=21.32 Aligned_cols=28 Identities=29% Similarity=0.377 Sum_probs=21.2
Q ss_pred hHHHHHHHHHcCCCCEEEEEeEeeeeeee
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGRLQTRKWT 88 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~l~~~~~~ 88 (171)
|.....+ ..|+.||.|.|+|-+-.-.|+
T Consensus 85 G~~s~~l-~~l~~Gd~v~i~gP~G~F~y~ 112 (114)
T d2cnda1 85 GLMTQYL-DSLPVGSYIDVKGPLGHVEYT 112 (114)
T ss_dssp CHHHHHH-HHCCTTCEEEEEEEECSEECC
T ss_pred chhHHHH-hhCCCCCEEEEECCceeeEEC
Confidence 4445454 569999999999988776675
No 26
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]}
Probab=49.60 E-value=9.1 Score=22.78 Aligned_cols=23 Identities=17% Similarity=0.366 Sum_probs=19.5
Q ss_pred hHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
|.....+.+.|+.||.|.|.|-+
T Consensus 74 G~~s~~l~~~l~~Gd~v~v~gP~ 96 (100)
T d1krha1 74 GKMSEYLSVQAKAGDKMSFTGPF 96 (100)
T ss_dssp CHHHHHHHTTCCTTCEEEEEEEE
T ss_pred CchhhhhhccCCCCCEEEEeccc
Confidence 67777887889999999999854
No 27
>d1nvpd2 b.56.1.1 (D:54-99) Small chain TOA2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.52 E-value=15 Score=19.19 Aligned_cols=29 Identities=10% Similarity=0.400 Sum_probs=23.6
Q ss_pred CEEEEEeEeeeeeeecCCCcEEEEEEEEEeEEEEc
Q psy14498 74 SQIYIEGRLQTRKWTNKEGVEKYITEVIADNMQML 108 (171)
Q Consensus 74 ~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l 108 (171)
+++.+.|+|.+.++=|. .+.+++.+++|-
T Consensus 1 nk~tfKG~L~tYRfCDn------VWTFilkdv~fk 29 (46)
T d1nvpd2 1 NRVNFRGSLNTYRFCDN------VWTFVLNDVEFR 29 (46)
T ss_dssp CEEEEEEEEEEEEEETT------EEEEEEEEEEEE
T ss_pred CceEEEEEeeeeccCCc------EEEEEEeceEEe
Confidence 46889999999998753 778888888876
No 28
>d1jb7a1 b.40.4.3 (A:36-204) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=49.32 E-value=9.3 Score=25.78 Aligned_cols=82 Identities=9% Similarity=0.070 Sum_probs=48.3
Q ss_pred cEEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEeee
Q psy14498 5 NKVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRLQT 84 (171)
Q Consensus 5 N~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l~~ 84 (171)
.+|.|+|-|..--..+.+....-+|.|+|. +.++.........+....+.|.+|.+.-+.+=.-.+.||.|.+.. ++.
T Consensus 15 ~~vNv~GVV~~~~~p~~s~g~D~~~tl~I~-D~S~~~~~~~~~~~~~~~l~v~~F~~~~~~LP~V~~~GDII~l~r-v~i 92 (169)
T d1jb7a1 15 QPQHFYAVVIDATFPYKTNQERYICSLKIV-DPTLYLKQQKGAGDASDYATLVLYAKRFEDLPIIHRAGDIIRVHR-ATL 92 (169)
T ss_dssp SCEEEEEEEEEECCCEECSSSCEEEEEEEE-BTTBSBCCTTSSCSCBCCEEEEEEESSGGGSCCCCEETCEEEEEE-EEE
T ss_pred CeEEEEEEEeecCCceecCCCcEEEEEEEE-eCCCCccccccccccCCceEEEEECCCHHHCCCCCCCCCEEEEEE-EEE
Confidence 457899988866555556443455555554 444432110001123668899999876555444234599999984 555
Q ss_pred eeee
Q psy14498 85 RKWT 88 (171)
Q Consensus 85 ~~~~ 88 (171)
+.|.
T Consensus 93 ~~~~ 96 (169)
T d1jb7a1 93 RLYN 96 (169)
T ss_dssp EEET
T ss_pred EEEC
Confidence 6674
No 29
>d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]}
Probab=48.68 E-value=17 Score=22.57 Aligned_cols=31 Identities=13% Similarity=0.387 Sum_probs=24.7
Q ss_pred HcCCCCEEEEEeEeeeeeeecCCCcEEEEEEEEEeEEEEc
Q psy14498 69 YLKKGSQIYIEGRLQTRKWTNKEGVEKYITEVIADNMQML 108 (171)
Q Consensus 69 ~l~kG~~V~V~G~l~~~~~~~kdG~~~~~~~i~a~~i~~l 108 (171)
.+..+++|.|.|.+... |. ..+|-|++|++|
T Consensus 76 ~v~p~~kV~i~GevDk~-~~--------~~eIdV~~I~~l 106 (106)
T d1nnxa_ 76 TVTPKDTVEIQGEVDKD-WN--------SVEIDVKQIRKV 106 (106)
T ss_dssp CCCTTSCEEEEEEEEEE-TT--------EEEEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEcCC-CC--------ceEEEEEEEEEC
Confidence 48999999999999744 42 368889988875
No 30
>d1qzga_ b.40.4.3 (A:) Protection of telomeres protein 1, Pot1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=46.53 E-value=13 Score=25.12 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=46.0
Q ss_pred cEEEEEEEeCCCCeEEEecC-Cc-EEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 5 NKVIIIGNLGRDPETRYMSN-GD-AVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 5 N~v~l~G~l~~dp~~~~~~~-g~-~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
..|.++|-|..--..+.+.. |+ -++.|+|. +.++... ..-+.|.+|.+..+.+-.-.+.||.|.+.. +
T Consensus 37 ~~VnviGVV~~~~~P~rs~~G~~Dy~~tl~I~-D~S~~~~--------~~gl~v~iF~~~~e~LP~V~~vGDII~l~r-v 106 (170)
T d1qzga_ 37 TIVNLFGIVKDFTPSRQSLHGTKDWVTTVYLW-DPTCDTS--------SIGLQIHLFSKQGNDLPVIKQVGQPLLLHQ-I 106 (170)
T ss_dssp EEEEEEEEEEEEEEEEECSSTTCCEEEEEEEE-CTTSCTT--------SCCEEEEEEESSSSCSCCCCSTTCEEEEEE-E
T ss_pred CEEEEEEEEeeccCceecCCCCCcEEEEEEEE-cCCCCCC--------CCceEEEEECCChHHCCCcCCCCCEEEEEE-E
Confidence 46778888887656656643 43 34445554 3333221 235799999886655554335699999985 5
Q ss_pred eeeeee
Q psy14498 83 QTRKWT 88 (171)
Q Consensus 83 ~~~~~~ 88 (171)
+.+.|.
T Consensus 107 kvq~~~ 112 (170)
T d1qzga_ 107 TLRSYR 112 (170)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 566774
No 31
>d2isba1 c.8.9.1 (A:2-179) Fumarate hydratase class I beta subunit {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=44.94 E-value=10 Score=25.95 Aligned_cols=18 Identities=39% Similarity=0.580 Sum_probs=15.4
Q ss_pred HHcCCCCEEEEEeEeeee
Q psy14498 68 QYLKKGSQIYIEGRLQTR 85 (171)
Q Consensus 68 ~~l~kG~~V~V~G~l~~~ 85 (171)
..|+.||.|+++|.|-+-
T Consensus 16 ~~L~vGD~V~LsG~i~ta 33 (178)
T d2isba1 16 LKLKVGDVVYITGEIFTA 33 (178)
T ss_dssp HHCCTTCEEEEEEEEEEC
T ss_pred hhCCCCCEEEEeeEEEEE
Confidence 349999999999998764
No 32
>d2cqaa1 b.40.4.14 (A:8-89) RuvB-like 2 protein, RUVBL2 (TIP49b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.83 E-value=28 Score=20.49 Aligned_cols=61 Identities=23% Similarity=0.331 Sum_probs=37.2
Q ss_pred EEEEEeCCCCeEEEec--CCcEEEEEEEEEecccccCCCCeeeeeceEEEEEEEhHHHHHHHHH-cCCCCEEEEE---eE
Q psy14498 8 IIIGNLGRDPETRYMS--NGDAVTNVSIATTENWRDKNSGEKRELTEWHRITFYRKLAQIVKQY-LKKGSQIYIE---GR 81 (171)
Q Consensus 8 ~l~G~l~~dp~~~~~~--~g~~~~~~~la~~~~~~~~~~G~~~~~~~~~~v~~~g~~A~~~~~~-l~kG~~V~V~---G~ 81 (171)
++.|.|..- ++.... .|..+..++|.+.+ ++. ...+=.++++.+.+. +..||.|+|+ |+
T Consensus 6 V~EGEV~ei-~i~~~~~~~~~~~~~itLKTtd-------~e~-------~l~lg~ki~e~L~kekV~~GDVI~ID~~sG~ 70 (82)
T d2cqaa1 6 IIEGEVVEI-QIDRPATGTGSKVGKLTLKTTE-------MET-------IYDLGTKMIESLTKDKVQAGDVITIDKATGK 70 (82)
T ss_dssp EEEEEEEEE-EEECTTSSSSSCEEEEEEECSS-------SEE-------EEEECSHHHHHHHHTTCCTTSEEEEETTTTE
T ss_pred EEEEEEEEE-EEccCCCCCcceeEEEEEEecC-------CeE-------EEeCCHHHHHHHHHcCCCcCCEEEEECCCcE
Confidence 466766542 332222 34667777777653 332 223345688877765 9999999998 65
Q ss_pred ee
Q psy14498 82 LQ 83 (171)
Q Consensus 82 l~ 83 (171)
+.
T Consensus 71 V~ 72 (82)
T d2cqaa1 71 IS 72 (82)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 33
>d1y7ma1 b.160.1.1 (A:49-164) Hypothetical protein YkuD, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=42.91 E-value=10 Score=23.21 Aligned_cols=20 Identities=15% Similarity=0.228 Sum_probs=17.8
Q ss_pred hHHHHHHHHHcCCCCEEEEE
Q psy14498 60 RKLAQIVKQYLKKGSQIYIE 79 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~ 79 (171)
.+.|+.+.+.+..|+.|.|.
T Consensus 96 ~~da~~ly~~~~~Gt~V~I~ 115 (116)
T d1y7ma1 96 NKDVIELASIVPNGTRVTIN 115 (116)
T ss_dssp HHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEE
Confidence 45899999999999999985
No 34
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]}
Probab=41.42 E-value=11 Score=22.67 Aligned_cols=22 Identities=5% Similarity=0.126 Sum_probs=18.1
Q ss_pred hHHHHHHHHHcCCCCEEEEEeE
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
|.....+.+.|+.||.|.|.|-
T Consensus 81 G~~S~~l~~~l~~Gd~v~v~gP 102 (107)
T d1gvha2 81 GQVSNWLHNHANVGDVVKLVAP 102 (107)
T ss_dssp CHHHHHHHHTCCTTCEEEEEEE
T ss_pred cchhHHHHhcCCCCCEEEEeCc
Confidence 5566667678999999999984
No 35
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=40.73 E-value=8.9 Score=23.34 Aligned_cols=22 Identities=9% Similarity=0.282 Sum_probs=18.3
Q ss_pred hHHHHHHHHHcCCCCEEEEEeE
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
|.....+.+.|+.||.|.|+|-
T Consensus 84 G~~S~~l~~~l~~Gd~v~v~gP 105 (111)
T d1cqxa2 84 GYVSNLLHDHVNVGDQVKLAAP 105 (111)
T ss_dssp CHHHHHHHHHCCTTCEEEECCC
T ss_pred chhHHHHHhcCCCCCEEEEEcc
Confidence 5567777788999999999984
No 36
>d1zata1 b.160.1.1 (A:339-466) L,D-transpeptidase, C-terminal, catalytic domain {Enterococcus faecium [TaxId: 1352]}
Probab=39.67 E-value=14 Score=22.56 Aligned_cols=23 Identities=13% Similarity=0.232 Sum_probs=18.9
Q ss_pred EEEEhHHHHHHHHHcCCCCEEEE
Q psy14498 56 ITFYRKLAQIVKQYLKKGSQIYI 78 (171)
Q Consensus 56 v~~~g~~A~~~~~~l~kG~~V~V 78 (171)
|.+....|+.+.+.+..|+.|.|
T Consensus 105 IRl~~~da~~ly~~v~~Gt~V~I 127 (128)
T d1zata1 105 INTPPSVMKELFGMVEKGTPVLV 127 (128)
T ss_dssp EEECHHHHHHHHHHCCTTCEEEE
T ss_pred cCcCHHHHHHHHhcCCCCCEEEe
Confidence 33445689999999999999987
No 37
>d1vqoj1 c.21.1.1 (J:4-145) Ribosomal protein L13 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=36.91 E-value=7 Score=25.78 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=17.6
Q ss_pred EhHHHHHHHHHcCCCCEEEEE
Q psy14498 59 YRKLAQIVKQYLKKGSQIYIE 79 (171)
Q Consensus 59 ~g~~A~~~~~~l~kG~~V~V~ 79 (171)
.|++|..++..|-.||.|.|-
T Consensus 16 lGRLAs~vAk~l~~Gd~ViVv 36 (142)
T d1vqoj1 16 MGRVASQVAEQALDGETVAVV 36 (142)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHHhcCCCEEEEE
Confidence 588999999999888877653
No 38
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=36.09 E-value=11 Score=22.92 Aligned_cols=23 Identities=13% Similarity=0.398 Sum_probs=19.2
Q ss_pred hHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
|....++.+.|+.|+.|.|.|-+
T Consensus 85 G~~S~~l~~~l~~Gd~v~i~gP~ 107 (109)
T d1tvca1 85 GRFSDYLRNDARVGQVLSVKGPL 107 (109)
T ss_dssp SSSHHHHHHHSSSSSEEEEEEEE
T ss_pred chHHHHHHhhCCCCCEEEEeCCc
Confidence 55677888889999999999854
No 39
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]}
Probab=33.71 E-value=31 Score=22.59 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=15.6
Q ss_pred HHHHHHHHcCCCCEEEEEeEe
Q psy14498 62 LAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 62 ~A~~~~~~l~kG~~V~V~G~l 82 (171)
.|......|++||.|.|.|..
T Consensus 128 vcS~yL~~lk~Gd~V~i~gp~ 148 (157)
T d1jb9a1 128 VCSNFLCNSKPGDKIQLTGPS 148 (157)
T ss_dssp HHHHHHHTCCTTCEEEEEEEE
T ss_pred eeehhhccCCCcCEEEEEecC
Confidence 444444459999999999964
No 40
>d1j3aa_ c.21.1.1 (A:) Ribosomal protein L13 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.29 E-value=9.1 Score=25.12 Aligned_cols=21 Identities=29% Similarity=0.412 Sum_probs=18.1
Q ss_pred EhHHHHHHHHHcCCCCEEEEE
Q psy14498 59 YRKLAQIVKQYLKKGSQIYIE 79 (171)
Q Consensus 59 ~g~~A~~~~~~l~kG~~V~V~ 79 (171)
.|++|..++..|.-||.|.|.
T Consensus 11 lGRLAs~vAk~L~~Gd~ViVv 31 (142)
T d1j3aa_ 11 LGRLASRVAKMLLEGEEVVIV 31 (142)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHHHhCCCeEEEE
Confidence 689999999999889887763
No 41
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=30.97 E-value=10 Score=25.28 Aligned_cols=22 Identities=23% Similarity=0.495 Sum_probs=16.5
Q ss_pred HHHHHHHHc-----CCCCEEEEEeEee
Q psy14498 62 LAQIVKQYL-----KKGSQIYIEGRLQ 83 (171)
Q Consensus 62 ~A~~~~~~l-----~kG~~V~V~G~l~ 83 (171)
+|+.+++.| ++|+.|.++|.|-
T Consensus 17 lg~~la~~l~~~~~~~g~ii~L~G~LG 43 (158)
T d1htwa_ 17 FGKKFAEILLKLHTEKAIMVYLNGDLG 43 (158)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEEECSTT
T ss_pred HHHHHHHHHHhccCCCCeEEEEecCCC
Confidence 555555554 8999999999874
No 42
>d2pp6a1 b.106.1.2 (A:1-93) Gifsy-2 prophage protein STM1035 {Salmonella typhimurium [TaxId: 90371]}
Probab=30.54 E-value=22 Score=21.46 Aligned_cols=30 Identities=13% Similarity=0.356 Sum_probs=21.6
Q ss_pred cCCCCEEEEEe-EeeeeeeecCCCcEEEEEE
Q psy14498 70 LKKGSQIYIEG-RLQTRKWTNKEGVEKYITE 99 (171)
Q Consensus 70 l~kG~~V~V~G-~l~~~~~~~kdG~~~~~~~ 99 (171)
=++||+|...| .+-..+|+.=||+.+..+|
T Consensus 61 Prr~D~Vv~~G~~~~VTr~~~~ngk~~i~lE 91 (93)
T d2pp6a1 61 PRRGDRVVLRGSEFTVTRIRRFNGKPQLTLE 91 (93)
T ss_dssp CCTTCEEEETTEEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCeEEecCcEEEEEEEEEECCcEEEEEe
Confidence 67899998888 5666677756887665554
No 43
>d1e32a1 b.52.2.3 (A:21-106) Membrane fusion ATPase p97 N-terminal domain , P97-Nn {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.06 E-value=16 Score=21.70 Aligned_cols=12 Identities=25% Similarity=0.747 Sum_probs=11.5
Q ss_pred cCCCCEEEEEeE
Q psy14498 70 LKKGSQIYIEGR 81 (171)
Q Consensus 70 l~kG~~V~V~G~ 81 (171)
|..||.|.|+|+
T Consensus 31 l~~GD~V~I~Gk 42 (86)
T d1e32a1 31 LFRGDTVLLKGK 42 (86)
T ss_dssp CCTTCEEEEECS
T ss_pred CCCCCEEEEEcC
Confidence 999999999996
No 44
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]}
Probab=29.05 E-value=20 Score=22.61 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=16.6
Q ss_pred hHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
|.....+. .|++||.|.|.|-.
T Consensus 107 G~~S~yL~-~lk~GD~v~v~GP~ 128 (133)
T d2bmwa1 107 GVCSTYLT-HIEPGSEVKITGPV 128 (133)
T ss_dssp CHHHHHHH-TCCTTCEEEEEEEE
T ss_pred cEehhhHh-hCCCCCEEEEeCCc
Confidence 55555554 59999999999954
No 45
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.02 E-value=15 Score=21.89 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=16.7
Q ss_pred hHHHHHHHHHcCCCCEEEEEeE
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
|..-..+. .|+.||.|.|.|-
T Consensus 72 G~~S~~l~-~lk~GD~v~v~gP 92 (99)
T d1fdra1 72 GKLSPRLA-ALKPGDEVQVVSE 92 (99)
T ss_dssp CSSHHHHH-TCCTTCEEEEESS
T ss_pred cHHHHHHh-hCCCCCEEEECcC
Confidence 66666665 5999999999983
No 46
>d2j0td1 b.40.3.1 (D:1-124) TIMP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.83 E-value=51 Score=20.24 Aligned_cols=70 Identities=14% Similarity=0.223 Sum_probs=42.5
Q ss_pred EEEEEEEeCCCCeEEEecCCcEEEEEEEEEecccccCCCCeeee-eceEEEEEEEhHHHHH-H---HHHcCCCCEEEEEe
Q psy14498 6 KVIIIGNLGRDPETRYMSNGDAVTNVSIATTENWRDKNSGEKRE-LTEWHRITFYRKLAQI-V---KQYLKKGSQIYIEG 80 (171)
Q Consensus 6 ~v~l~G~l~~dp~~~~~~~g~~~~~~~la~~~~~~~~~~G~~~~-~~~~~~v~~~g~~A~~-~---~~~l~kG~~V~V~G 80 (171)
.++|-|+|.+..++.. +....+|.|.+.+-||..+ .-... ...+ +|-...+. . ...|..|..-+|.|
T Consensus 16 DfVi~akV~~~~~~~~---~~~~~~y~v~v~kv~K~~~-~~~~~~~~~~----l~tp~~~~~CG~~~~~l~~g~~YLI~G 87 (124)
T d2j0td1 16 DLVIRAKFVGTPEVNQ---TTLYQRYEIKMTKMYKGFQ-ALGDAADIRF----VYTPAMESVCGYFHRSHNRSEEFLIAG 87 (124)
T ss_dssp SEEEEEEECSSCEEET---TTTEEEEEEEEEECSSCSS-CSSCCCCCSE----EEEESCGGGTCCCCCCSCSSCEEEEEE
T ss_pred CEEEEEEEeeccccCC---CcceEEEEEEEEEEEcCCc-ccccccCceE----EEecCccCccCccCcccCCCCeEEEEE
Confidence 3678999988776543 3347899999999998642 11111 1222 22211111 1 13488999999999
Q ss_pred Eee
Q psy14498 81 RLQ 83 (171)
Q Consensus 81 ~l~ 83 (171)
++.
T Consensus 88 ~~~ 90 (124)
T d2j0td1 88 KLQ 90 (124)
T ss_dssp EEE
T ss_pred Eec
Confidence 854
No 47
>d2vgna1 b.38.4.1 (A:1-135) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=27.00 E-value=49 Score=21.06 Aligned_cols=53 Identities=9% Similarity=-0.068 Sum_probs=27.5
Q ss_pred EEEEEEEhH-HHHHHHHHcCCCCEEEEEeEeeeeeeecCCC-----cEEEEEEEEEeEEEEc
Q psy14498 53 WHRITFYRK-LAQIVKQYLKKGSQIYIEGRLQTRKWTNKEG-----VEKYITEVIADNMQML 108 (171)
Q Consensus 53 ~~~v~~~g~-~A~~~~~~l~kG~~V~V~G~l~~~~~~~kdG-----~~~~~~~i~a~~i~~l 108 (171)
++.++.=.. ---.+.+.+++||.|... ..+.-+...| .+...+.|.+..++|-
T Consensus 17 ~v~l~pE~~dDLW~LynlI~~GD~V~~~---t~R~~~~~~~~~~~er~~~~L~I~Ve~~ef~ 75 (135)
T d2vgna1 17 VITLLPEDKEDLFTVYQIVDKDDELIFK---KKFTSKLDEAGKKKSTDLVKLKIKVISEDFD 75 (135)
T ss_dssp EEEEECCSHHHHHHHHTTCCTTCEEEEE---ECC-------------CCEEEEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHhccCCCEEEEE---EEEEEecCCCCccEEEEEEEEEEEEEEEEee
Confidence 445544332 333566779999998643 2222222222 2345677778888774
No 48
>d1i96v_ d.68.1.1 (V:) Translation initiation factor IF3, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=26.85 E-value=22 Score=20.96 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCCEEEEEeEeeeeeee
Q psy14498 61 KLAQIVKQYLKKGSQIYIEGRLQTRKWT 88 (171)
Q Consensus 61 ~~A~~~~~~l~kG~~V~V~G~l~~~~~~ 88 (171)
-.+..+.++|.+|+.|-|.=+++-|.-.
T Consensus 18 ~K~k~a~~FL~~G~kVKv~v~frGRe~~ 45 (86)
T d1i96v_ 18 TKLGHIKRFLQEGHKVKVTIMFRGREVA 45 (86)
T ss_pred HHHHHHHHHHhcCCeEEEEEEEeccccc
Confidence 3677888999999999999888877654
No 49
>d1fx0a2 b.49.1.1 (A:25-96) F1 ATP synthase alpha subunit, domain 1 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=26.54 E-value=43 Score=19.00 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=22.7
Q ss_pred eceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 50 LTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 50 ~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
+.+.+.|+++|+. +.++.|+.|.-+|++
T Consensus 44 e~d~VgvVllg~~-----~~i~~G~~V~rTG~v 71 (72)
T d1fx0a2 44 ESNNVGVVLMGDG-----LMIQEGSSVKATGRI 71 (72)
T ss_dssp CSSEEEEEECSCG-----GGCCTTCEEECCCCC
T ss_pred cCCEEEEEEECCC-----CccCCCCEEEecccc
Confidence 4678899999873 349999999988875
No 50
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=25.39 E-value=5.9 Score=23.76 Aligned_cols=23 Identities=22% Similarity=0.151 Sum_probs=18.2
Q ss_pred hHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 60 RKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 60 g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
|.....+.+.+++|+.|.|.|-.
T Consensus 70 g~~s~~l~~~l~~G~~v~v~gP~ 92 (97)
T d1qfja1 70 NLYAKAVMDRILKDHQIVVDIPH 92 (97)
T ss_dssp --CCHHHHHHHHHHSEEEEEEEE
T ss_pred CchhHhHhhcCCCCCEEEEeccC
Confidence 66778888889999999999853
No 51
>d1skyb2 b.49.1.1 (B:21-95) F1 ATP synthase alpha subunit, domain 1 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=24.93 E-value=59 Score=18.52 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=23.0
Q ss_pred eceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 50 LTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 50 ~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
+.+.+.|+++|+. ..++.|+.|.-+|++
T Consensus 47 e~d~VgvVllg~~-----~~i~~G~~V~rTg~v 74 (75)
T d1skyb2 47 EENNVGIVILGPY-----TGIKEGDEVRRTGRI 74 (75)
T ss_dssp ETTEEEEEESSCC-----SSCCTTCEEEEEEEE
T ss_pred cCcEEEEEEECCC-----CcccCCCEEEecccc
Confidence 4678899999873 348999999999986
No 52
>d2jdia2 b.49.1.1 (A:24-94) F1 ATP synthase alpha subunit, domain 1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.73 E-value=45 Score=18.85 Aligned_cols=28 Identities=11% Similarity=0.224 Sum_probs=21.9
Q ss_pred eceEEEEEEEhHHHHHHHHHcCCCCEEEEEeEe
Q psy14498 50 LTEWHRITFYRKLAQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 50 ~~~~~~v~~~g~~A~~~~~~l~kG~~V~V~G~l 82 (171)
+.+.+.|+++|+- +.++.|+.|.-+|++
T Consensus 44 ~e~~VgvVllg~~-----~~i~eG~~V~rTG~v 71 (71)
T d2jdia2 44 EPDNVGVVVFGND-----KLIKEGDIVKRTGAI 71 (71)
T ss_dssp CSSCEEEEESSCG-----GGCCTTCEEECCCCC
T ss_pred cccEEEEEEECCC-----CccCCCCEEEecccC
Confidence 3567899999973 349999999888764
No 53
>d1p3da2 c.59.1.1 (A:322-473) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=24.02 E-value=28 Score=21.60 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=20.0
Q ss_pred EEhHHHHHHHHHcCCCCEEEEEeE
Q psy14498 58 FYRKLAQIVKQYLKKGSQIYIEGR 81 (171)
Q Consensus 58 ~~g~~A~~~~~~l~kG~~V~V~G~ 81 (171)
-+..+.+.+.+.+++||.|++-|-
T Consensus 115 ~~~~~i~~~~~~~~~gDiil~mGa 138 (152)
T d1p3da2 115 DTSQLGDVLDQIIQDGDLILAQGA 138 (152)
T ss_dssp CGGGHHHHHHHHCCTTCEEEEECS
T ss_pred CHHHHHHHHHHhCCCCCEEEEEcC
Confidence 355688888999999999999873
No 54
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=23.94 E-value=36 Score=19.84 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCEEEEEeEe
Q psy14498 63 AQIVKQYLKKGSQIYIEGRL 82 (171)
Q Consensus 63 A~~~~~~l~kG~~V~V~G~l 82 (171)
.......|+.||.|.|.|-+
T Consensus 78 ~t~~l~~l~~Gd~v~v~GP~ 97 (101)
T d1ep3b1 78 GTYKLSKLESGAKVDVMGPL 97 (101)
T ss_dssp HHHHHHTCCTTCEEEEEEEE
T ss_pred hhHHHHhCCCCCEEEEeccc
Confidence 33444569999999999964
No 55
>d1tiga_ d.68.1.1 (A:) Translation initiation factor IF3, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.37 E-value=23 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.365 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCCCEEEEEeEeeeeeee
Q psy14498 62 LAQIVKQYLKKGSQIYIEGRLQTRKWT 88 (171)
Q Consensus 62 ~A~~~~~~l~kG~~V~V~G~l~~~~~~ 88 (171)
.+..+.++|.+|+.|-|.=+++-|.-.
T Consensus 20 K~k~a~~FL~~G~kVKv~v~frGRe~~ 46 (88)
T d1tiga_ 20 KLRNARKFLEKGDKVKATIRFKGRAIT 46 (88)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCSCCTT
T ss_pred HHHHHHHHHhcCCeEEEEEEEcCcccc
Confidence 677888999999999999888877643
No 56
>d2d6fa1 b.38.3.1 (A:2-73) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.48 E-value=34 Score=19.53 Aligned_cols=21 Identities=10% Similarity=0.306 Sum_probs=16.3
Q ss_pred EhHHHHHHHHH-cCCCCEEEEE
Q psy14498 59 YRKLAQIVKQY-LKKGSQIYIE 79 (171)
Q Consensus 59 ~g~~A~~~~~~-l~kG~~V~V~ 79 (171)
+|+..+.+.++ +..||+|.|+
T Consensus 3 ~gk~~~fL~~~~i~vGD~V~i~ 24 (72)
T d2d6fa1 3 QGRARKFLESASIDVGDMVLVE 24 (72)
T ss_dssp CHHHHHHHHTTTCCTTCEEEEE
T ss_pred chHHHHHHHHcCCCCCCEEEEE
Confidence 46667777665 8899999996
No 57
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]}
Probab=21.44 E-value=37 Score=20.08 Aligned_cols=24 Identities=25% Similarity=0.436 Sum_probs=18.3
Q ss_pred HHHHHcCCCCEEEEE-eEeeeeeee
Q psy14498 65 IVKQYLKKGSQIYIE-GRLQTRKWT 88 (171)
Q Consensus 65 ~~~~~l~kG~~V~V~-G~l~~~~~~ 88 (171)
.+.+.+++|+.|++. |.|+.+.-+
T Consensus 43 ~l~~~vk~Gd~IlidDG~i~l~V~~ 67 (99)
T d1pkla1 43 NLSKVVRPGNYIYIDDGILILQVQS 67 (99)
T ss_dssp THHHHCCTTCEEEETTTTEEEEEEE
T ss_pred HhHhhhccCCEEEEcCCeeEEEEEE
Confidence 345559999999998 777777654
No 58
>d2ifea_ d.68.1.1 (A:) Translation initiation factor IF3, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.61 E-value=18 Score=21.71 Aligned_cols=30 Identities=17% Similarity=0.311 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCEEEEEeEeeeeeeecC
Q psy14498 61 KLAQIVKQYLKKGSQIYIEGRLQTRKWTNK 90 (171)
Q Consensus 61 ~~A~~~~~~l~kG~~V~V~G~l~~~~~~~k 90 (171)
-....+.++|.+|+.|-|.=+++-|.-...
T Consensus 20 ~Klk~a~~FL~~G~kVKv~i~frGRE~~~~ 49 (91)
T d2ifea_ 20 VKLRSLIRFLEEGDKAKITLRFRGREMAHQ 49 (91)
T ss_dssp HHHHHHHHHHHTTEEEEEEECCSSCTTCCS
T ss_pred HHHHHHHHHHHCCCeEEEEEEEcCCcccCH
Confidence 357788899999999999988887775544
Done!