BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14499
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7A1B9|DHE2_STAAW NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=gluD PE=3 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|Q6GAW8|DHE2_STAAS NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=gluD PE=3 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|Q6GID0|DHE2_STAAR NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=gluD PE=3 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|Q7A6H8|DHE2_STAAN NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=gluD PE=1 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|Q99VD0|DHE2_STAAM NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=gluD PE=1 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|Q5HHC7|DHE2_STAAC NAD-specific glutamate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=gluD PE=3 SV=1
Length = 414
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 169/261 (64%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKPI +GGS GR ++T GV I + A + N+ I +K
Sbjct: 154 MAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAK 213
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGN GS A + GAKIV I D +++PNG +I L ++ + E
Sbjct: 214 VVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFE 273
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
E I++ KE + + CDIL+PAAI +QIT +NA+++ A I++E ANGPTT EA IL ++G
Sbjct: 274 -ETISN-KELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I+L PDV+ +AGGV VSYFEWVQN W+E+E+N +L + AFD I+EL+ +K+
Sbjct: 332 ILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKID 391
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
+R AA+IIG R +A + RG
Sbjct: 392 MRLAAYIIGIKRTAEAARYRG 412
>sp|P39633|DHE2_BACSU Catabolic NAD-specific glutamate dehydrogenase RocG OS=Bacillus
subtilis (strain 168) GN=rocG PE=1 SV=3
Length = 424
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 167/262 (63%), Gaps = 4/262 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + + PG +TGKP+ +GGS GR+ AT +GV I + K + + N++
Sbjct: 164 MAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNAR 223
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKL-QKYVTFTRSIKDFN 119
I IQGFGN GS A AGAK++ I D +YNP+G +IP L K +F F
Sbjct: 224 IIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFT 283
Query: 120 EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDK 179
+ + ++E CDIL+PAAI +QIT NA+N+ A I++E ANGPTT +A IL ++
Sbjct: 284 D---VITNEELLEKDCDILVPAAISNQITAKNAHNIQASIVVEAANGPTTIDATKILNER 340
Query: 180 GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKV 239
G++L PD++ +AGGV VSYFEWVQN W+E+E+ +L +++ ++F+ I++ A T KV
Sbjct: 341 GVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKV 400
Query: 240 SLRTAAFIIGCTRVLQAHKTRG 261
+R AA++ G + +A + RG
Sbjct: 401 DMRLAAYMTGIRKSAEASRFRG 422
>sp|P96110|DHE3_THEMA Glutamate dehydrogenase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=gdhA PE=1 SV=4
Length = 416
Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 169/263 (64%), Gaps = 2/263 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W MDTYS +T+ GIVTGKP+ +GGS GR++ATGRGV + + ++ +
Sbjct: 153 MAWYMDTYSMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKAT 212
Query: 61 ISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN 119
+++QGFGNVG AA L + G+K+VA+ D + IYNP GF++ +L +Y ++ +
Sbjct: 213 VAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYP 272
Query: 120 EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDK 179
+GE+I + +E + DIL+PAA+E I NA + AK ++EGANGPTT EAD+IL +
Sbjct: 273 KGERITN-EELLELDVDILVPAALEGAIHAGNAERIKAKAVVEGANGPTTPEADEILSRR 331
Query: 180 GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKV 239
GI++ PD++ NAGGV VSYFEWVQ+L + W ++ L ++ AF+ + ++ V
Sbjct: 332 GILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNV 391
Query: 240 SLRTAAFIIGCTRVLQAHKTRGL 262
+RTAA+I+ RV A K RG+
Sbjct: 392 DMRTAAYILAIDRVAYATKKRGI 414
>sp|P54386|DHE4_SYNY3 NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=gdhA PE=3 SV=1
Length = 428
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/270 (43%), Positives = 167/270 (61%), Gaps = 10/270 (3%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M WMMD YS + P +VTGKP+++GGS GR ATG G F I + K + N+
Sbjct: 152 MGWMMDQYSIIRRKISPAVVTGKPVTMGGSQGRNTATGTGAFYIMQGMLPKFDQYPENTT 211
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKL----QKYVTFT---- 112
+++QGFGN G V A ++ G K+VAI D + IYN G +IP + Q++ T
Sbjct: 212 VAVQGFGNAGMVVAECLYQDGYKVVAISDSQGGIYNEQGIDIPAVIDYKQRHRTLAGMYC 271
Query: 113 -RSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTE 171
++I D E ++I+++ E ++ D+LIPAA+E+QIT +NA+ V A+ I E ANGPTTT
Sbjct: 272 DQAICDLGENQQISNA-ELLALDVDVLIPAALENQITRDNADQVRARYIFEVANGPTTTA 330
Query: 172 ADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIW 231
ADDIL KGI + PD++ NAGGV VSYFEWVQN S L W+ +E+N RL + + +W
Sbjct: 331 ADDILASKGIYVFPDILVNAGGVTVSYFEWVQNRSGLYWSAKEVNDRLKEKMVEEAEHVW 390
Query: 232 ELANTKKVSLRTAAFIIGCTRVLQAHKTRG 261
+ V++RTAA+I R+ +A +G
Sbjct: 391 NITQELDVNVRTAAYIHALNRLSEAMDAKG 420
>sp|P50735|GUDB_BACSU Cryptic catabolic NAD-specific glutamate dehydrogenase GudB
OS=Bacillus subtilis (strain 168) GN=gudB PE=1 SV=2
Length = 427
Score = 227 bits (579), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 169/262 (64%), Gaps = 4/262 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+WMMD YS + PG +TGKP+ +GGS GR+ AT +GV I + A K ++I ++
Sbjct: 167 MAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESATAKGVTICIKEAAKKRGIDIKGAR 226
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKL-QKYVTFTRSIKDFN 119
+ +QGFGN GS A AGAK+V I D +Y+P G +I L + +F K FN
Sbjct: 227 VVVQGFGNAGSYLAKFMHDAGAKVVGISDAYGGLYDPEGLDIDYLLDRRDSFGTVTKLFN 286
Query: 120 EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDK 179
+ ++E + CDIL+PAAIE+QIT NA+N+ AKI++E ANGPTT E IL D+
Sbjct: 287 D---TITNQELLELDCDILVPAAIENQITEENAHNIRAKIVVEAANGPTTLEGTKILSDR 343
Query: 180 GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKV 239
I+L PDV+ +AGGV VSYFEWVQN W+E+E+ +L ++ +F+ I+E+AN +++
Sbjct: 344 DILLVPDVLASAGGVTVSYFEWVQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRI 403
Query: 240 SLRTAAFIIGCTRVLQAHKTRG 261
+R AA+++G ++ +A + RG
Sbjct: 404 DMRLAAYMVGVRKMAEASRFRG 425
>sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2
SV=1
Length = 411
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 159/261 (60%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS ++ P IVTGKPI +GGS GR+ ATGRGV + ++ NI +
Sbjct: 150 MAWILDEYSKFHGHS-PAIVTGKPIDLGGSLGREAATGRGVVYATEALLAEYGKNIKDLT 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+IQGFGNVG+ AA L + G K++A+ D + NPNG +IP L + T + DF+
Sbjct: 209 FAIQGFGNVGAWAAKLIHERGGKVIAVSDITGAVKNPNGLDIPALLNHKEATGKLIDFSG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+ +N S E + CD+LIP A+ + NA+NV AK I+E AN PT EAD+IL KG
Sbjct: 269 GDVMN-SDEVLTHECDVLIPCALGGVLNRENADNVKAKFIIEAANHPTDPEADEILCKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
I++ PD+ NAGGV VSYFEWVQN+ +W E+++N L + AF + + + S
Sbjct: 328 IVILPDIYANAGGVTVSYFEWVQNIQGFMWDEEKVNRELRKYMTKAFHNLKNMCQSHNCS 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV +A RG
Sbjct: 388 LRMGAFTLGVNRVARATTLRG 408
>sp|O74024|DHE3_THEPR Glutamate dehydrogenase OS=Thermococcus profundus GN=gdhA PE=1 SV=1
Length = 419
Score = 225 bits (573), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 165/267 (61%), Gaps = 10/267 (3%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M WMMD Y T P G++TGKP+SIGGS GR AT +G + A + +++
Sbjct: 153 MGWMMDEYETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKG 212
Query: 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117
KI++QG+GN G A L + G +VA+ D + IYNP+G + ++ K+ S+KD
Sbjct: 213 KKIAVQGYGNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGLDPDEVLKWKREHGSVKD 272
Query: 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILR 177
F I + +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EADDILR
Sbjct: 273 FPGATNITN-EELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANGPVTPEADDILR 331
Query: 178 DKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK 237
+KGI+ PD + NAGGV VSYFEWVQN++ WTE+E+ +L+ + AF WE+ NT
Sbjct: 332 EKGILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAF---WEVYNTH 388
Query: 238 K---VSLRTAAFIIGCTRVLQAHKTRG 261
K + +R AA+++ +RV QA K RG
Sbjct: 389 KDKNIHMRDAAYVVAVSRVYQAMKDRG 415
>sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1
Length = 411
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 158/261 (60%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS ++ P +VTGKPI +GGS GR+ ATGRGV + ++ +I
Sbjct: 150 MAWILDEYSKFHGHS-PAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGLT 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
IQGFGNVG+ AA L + G K+VA+ D I NP G +I L K+ T S+ DFN
Sbjct: 209 FVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATGSLNDFNG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+ +N S E CD+LIP A+ + NA +V AK I+E AN PT +AD+IL KG
Sbjct: 269 GDAMN-SDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDPDADEILSKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+I+ PD+ NAGGV VSYFEWVQN+ +W E+++NL L + AF I + +T +
Sbjct: 328 VIILPDIYANAGGVTVSYFEWVQNIQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHSCN 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV +A + RG
Sbjct: 388 LRMGAFTLGVNRVARATQLRG 408
>sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3
PE=1 SV=1
Length = 411
Score = 221 bits (562), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 152/261 (58%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS ++ P +VTGKPI +GGS GR ATGRGV + ++ I +
Sbjct: 150 MAWILDEYSKFHGHS-PAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKTISGQR 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+IQGFGNVGS AA L G KIVA+ D I N NG +I L ++ R IK F+
Sbjct: 209 FAIQGFGNVGSWAAKLISDKGGKIVAVSDVTGAIKNNNGIDILSLLEHAEENRGIKGFDG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
+ I D CDIL+PAA+ I NAN + AK I+EGAN PT EAD+IL+ KG
Sbjct: 269 ADSI-DPDSILVEDCDILVPAALGGVINRENANEIKAKFIIEGANHPTDPEADEILKKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+++ PD+ N+GGV VSYFEWVQN+ +W E+++N L + F + E+ T
Sbjct: 328 VMILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNRELKTYMTRGFKDLKEMCQTHSCD 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV QA RG
Sbjct: 388 LRMGAFTLGINRVAQATTIRG 408
>sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1
Length = 411
Score = 220 bits (561), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 156/261 (59%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS Y+ P +VTGKP+ +GGS GR ATGRGV + ++ I +
Sbjct: 150 MAWILDEYSKFHGYS-PAVVTGKPVDLGGSLGRDAATGRGVLFATEALLAEHGKGIAGQR 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
IQGFGNVGS AA L +AG K++AI D + N +G +I +L K+ + IK F
Sbjct: 209 FVIQGFGNVGSWAAQLISEAGGKVIAISDVTGAVKNVDGLDIAQLVKHSAENKGIKGFKG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+ I + CD+LIPAA+ I +NAN++ AK I+E AN PT EAD+IL KG
Sbjct: 269 GDAIA-PDSLLTEECDVLIPAALGGVINKDNANDIKAKYIIEAANHPTDPEADEILSKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+++ PD++ N+GGV VSYFEWVQN+ +W E+++N L I AF + ++ +
Sbjct: 328 VLILPDILANSGGVTVSYFEWVQNIQGFMWDEEKVNAELRTYITRAFGNVKQMCRSHSCD 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV +A RG
Sbjct: 388 LRMGAFTLGVNRVARATVLRG 408
>sp|P80319|DHE3_PYRFU Glutamate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gdhA PE=1 SV=2
Length = 420
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 162/265 (61%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P GI+TGKP+SIGGS GR +AT RG + A + + +
Sbjct: 153 MAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116
K I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ K+ S+K
Sbjct: 213 GKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVK 272
Query: 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDIL 176
DF I + +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EAD+IL
Sbjct: 273 DFPGATNITN-EELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEIL 331
Query: 177 RDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236
+KGI+ PD + NAGGV VSYFEWVQN++ WT +E+ RL+ + AF ++ +A
Sbjct: 332 FEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKE 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
K + +R AA+++ RV QA RG
Sbjct: 392 KNIHMRDAAYVVAVQRVYQAMLDRG 416
>sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1
Length = 411
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 152/261 (58%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS Y+ P +VTGKPI +GGS GR ATGRGV + ++ I +
Sbjct: 150 MAWILDEYSKFHGYS-PAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGKTISGQR 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
IQGFGNVGS AA L + G KIVA+ D I N +G +IP L K+ R +K F+
Sbjct: 209 FVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDIPALLKHTKEHRGVKGFDG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
+ I D CDIL+PAA+ I NAN + AK I+E AN PT +AD+IL KG
Sbjct: 269 ADPI-DPNSILVEDCDILVPAALGGVINRENANEIKAKFIIEAANHPTDPDADEILSKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+++ PD+ N+GGV VSYFEWVQN+ +W E+++N L + +F + E+ T
Sbjct: 328 VVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNDELKTYMTRSFKDLKEMCKTHSCD 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV QA RG
Sbjct: 388 LRMGAFTLGVNRVAQATILRG 408
>sp|P0CL72|DHE3_PYRHR Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1
Length = 420
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 162/265 (61%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P GI+TGKP+SIGGS GR +AT RG + A + + +
Sbjct: 153 MAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDGLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116
K I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ K+ S+K
Sbjct: 213 GKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVK 272
Query: 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDIL 176
DF I++ +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EAD+IL
Sbjct: 273 DFPGATNISN-EELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEIL 331
Query: 177 RDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236
+KGI+ PD + NAGGV VSYFEWVQN++ WT +E+ RL+ + AF ++ A
Sbjct: 332 FEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVRERLDKKMTKAFYDVYNTAKE 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
K + +R AA+++ RV QA RG
Sbjct: 392 KNIHMRDAAYVVAVQRVYQAMLDRG 416
>sp|P0CL73|DHE3_PYRHO Glutamate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=gdhA PE=3 SV=1
Length = 420
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 162/265 (61%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P GI+TGKP+SIGGS GR +AT RG + A + + +
Sbjct: 153 MAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDGLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116
K I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ K+ S+K
Sbjct: 213 GKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVK 272
Query: 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDIL 176
DF I++ +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EAD+IL
Sbjct: 273 DFPGATNISN-EELLELDVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEIL 331
Query: 177 RDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236
+KGI+ PD + NAGGV VSYFEWVQN++ WT +E+ RL+ + AF ++ A
Sbjct: 332 FEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVRERLDKKMTKAFYDVYNTAKE 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
K + +R AA+++ RV QA RG
Sbjct: 392 KNIHMRDAAYVVAVQRVYQAMLDRG 416
>sp|Q47950|DHE3_PYRAB Glutamate dehydrogenase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=gdhA PE=3 SV=2
Length = 420
Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 161/265 (60%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P GI+TGKP+SIGGS GR +AT RG + A + + +
Sbjct: 153 MAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDDLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116
K I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ K+ S+K
Sbjct: 213 GKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVK 272
Query: 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDIL 176
DF I + +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EAD+IL
Sbjct: 273 DFPGATNITN-EELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEIL 331
Query: 177 RDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236
+KGI+ PD + NAGGV VSYFEWVQN++ WT +E+ +L+ + AF ++ A
Sbjct: 332 FEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVREKLDKKMTKAFYDVYNTAKE 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
K + +R AA+++ RV QA RG
Sbjct: 392 KNIHMRDAAYVVAVQRVYQAMLDRG 416
>sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2
SV=1
Length = 411
Score = 217 bits (552), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 150/261 (57%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS Y+ P +VTGKPI +GGS GR ATGRGV + +I +
Sbjct: 150 MAWILDEYSKFHGYS-PAVVTGKPIDLGGSLGRDAATGRGVLFAAEALLRDHGKSIAGQR 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+QGFGNVGS AA L + G KIVA+ D I N NG +I L K+V R +K F+
Sbjct: 209 FVVQGFGNVGSWAAQLITEQGGKIVAVSDITGAIKNKNGIDIASLLKHVKENRGVKGFHG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
+ I D CD+LIPAA+ I +NA ++ AK I+E AN PT EAD+IL KG
Sbjct: 269 ADSI-DPNSILVEDCDVLIPAALGGVINRDNAKDIKAKFIVEAANHPTDPEADEILAKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+++ PD+ N+GGV VSYFEWVQN+ +W E+ +N L + F + ++ T
Sbjct: 328 VVILPDIYANSGGVTVSYFEWVQNIQGFMWDEERVNTELKAYMNRGFKDVKDMCKTHNCD 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV +A RG
Sbjct: 388 LRMGAFTLGVNRVARATTLRG 408
>sp|Q56304|DHE3_THELI Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3
Length = 419
Score = 214 bits (545), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 163/267 (61%), Gaps = 10/267 (3%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P G++TGKP S+GG R AT RG + A + +++
Sbjct: 153 MAWMMDEYETISRRKDPSFGVITGKPPSVGGIVARMDATARGASYTVREAAKALGMDLKG 212
Query: 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117
I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ + T S+KD
Sbjct: 213 KTIAIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYNPDGLNADEVLAWKKKTGSVKD 272
Query: 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILR 177
F I + +E + D+L P+AIE+ IT NA+N+ AKI+ E ANGPTT EAD+IL
Sbjct: 273 FPGATNITN-EELLELEVDVLAPSAIEEVITKKNADNIKAKIVAELANGPTTPEADEILY 331
Query: 178 DKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK 237
+KGI++ PD + NAGGV VSYFEWVQN++ WT +E +L+ + AF W++ NT
Sbjct: 332 EKGILIIPDFLCNAGGVTVSYFEWVQNITGDYWTVEETRAKLDKKMTKAF---WDVYNTH 388
Query: 238 K---VSLRTAAFIIGCTRVLQAHKTRG 261
K +++R AA+++ +RV QA K RG
Sbjct: 389 KEKNINMRDAAYVVAVSRVYQAMKDRG 415
>sp|Q47951|DHE3_PYREN Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1
Length = 420
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 157/265 (59%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y P GI+TGKP+SIGGS GR +AT RG + + +
Sbjct: 153 MAWMMDEYEAISRRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREARKVLGWGDLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116
K I+IQG+GN G A + + G K+VA+ D K IYNP+G N ++ K+ S+K
Sbjct: 213 GKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKQEHGSVK 272
Query: 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDIL 176
DF I + +E + D+L PAAIE+ IT NA+N+ AKI+ E ANGP T EAD+IL
Sbjct: 273 DFPGATNITN-EELLELEVDVLAPAAIEEVITKKNADNIKAKIVAEVANGPVTPEADEIL 331
Query: 177 RDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236
+KGI+ PD + NAGGV VSYFEWVQN++ WT +E+ +L+ + AF ++ A
Sbjct: 332 FEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTLEEVREKLDKKMTKAFYDVYNTAKE 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
K + +R A +++ RV QA RG
Sbjct: 392 KNIHMRDADYVVAVQRVYQAMLDRG 416
>sp|P29051|DHE41_HALSI NAD-specific glutamate dehydrogenase A OS=Halobacterium salinarum
GN=gdhA PE=1 SV=1
Length = 435
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 163/262 (62%), Gaps = 2/262 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W+MD YS ++ T PG+VTGKP +GGS GR++A GR V II + + + +
Sbjct: 174 MAWLMDAYSMQEGETTPGVVTGKPPVVGGSEGREEAPGRSVAIITQLVCEYYDQPLDETT 233
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+++QG+G+VG+ AA L K GA IVAI D +Y P+G + + + ++ +
Sbjct: 234 VAVQGYGSVGANAARLLDKWGATIVAISDVNGAMYEPDGIDTASVPSHDEEPEAVTTY-- 291
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
+ + ++E ++ D+LIPAA+ + IT NA + A +++EGANGPTT+ AD IL D+
Sbjct: 292 ADTVISNEELLTLDVDVLIPAALGNVITKENAEAIAADLVVEGANGPTTSTADSILADRD 351
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+ + PD++ NAGGV VSYFEW+Q+++ W+ + +N L + A+ A+ + + V+
Sbjct: 352 VAVIPDILANAGGVTVSYFEWLQDINRRAWSLERVNDELEAEMQAAWRAVKDEYENRDVT 411
Query: 241 LRTAAFIIGCTRVLQAHKTRGL 262
R AA+I+ +R+ +AH+ RGL
Sbjct: 412 WRDAAYIVALSRIAEAHEARGL 433
>sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1
Length = 412
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 3/262 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS Y+ P +VTGKP+ +GGS GR ATGRG + ++ ++ +
Sbjct: 150 MAWILDEYSKFHGYS-PAVVTGKPVDLGGSLGRDAATGRGALFATEALLNEHGKSVAGQR 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
IQGFGNVGS AA L + G K+VA+ D I N G +I L K+V TR +K F++
Sbjct: 209 FVIQGFGNVGSWAAKLIHEQGGKVVAVSDITGAIKNEKGIDIESLFKHVKETRGVKGFHD 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNAN-NVTAKIILEGANGPTTTEADDILRDK 179
I D+ CD+LIPAA+ I +N + AK I+E AN PT EAD+IL K
Sbjct: 269 AHPI-DANSILVEDCDVLIPAALGGVINKDNHKLKIKAKYIIEAANHPTDPEADEILSKK 327
Query: 180 GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKV 239
G+ + PD+ N+GGV VSYFEWVQN+ +W E+++N L + F + ++ T
Sbjct: 328 GVTILPDIYANSGGVTVSYFEWVQNIQGFMWDEKKVNDELKTYMTRGFKDVKDMCKTHNC 387
Query: 240 SLRTAAFIIGCTRVLQAHKTRG 261
LR AF +G RV +A RG
Sbjct: 388 DLRMGAFTLGVNRVARATVLRG 409
>sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1
Length = 411
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 151/261 (57%), Gaps = 2/261 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W++D YS ++ P +VTGKPI++GGS GR+ ATGRGV + ++ +I
Sbjct: 150 MAWILDEYSKFHGHS-PAVVTGKPIALGGSLGREAATGRGVVFATEALLAQHGKSIKGLT 208
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
IQGFGNVGS A L + G KI+A+ D + N NG +I L ++ T + +F+
Sbjct: 209 FVIQGFGNVGSWVARLIGERGGKIIAVSDVTGAVKNQNGLDIVDLLRHKEETGCLTNFSG 268
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+ + D E + CD+LIP A+ + NA +V AK I+E AN PT EAD+IL KG
Sbjct: 269 GDHM-DPNELLTHECDVLIPCALGGVLNKENAADVKAKFIIEAANHPTDPEADEILSKKG 327
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
++ PD+ NAGGV VSYFEWVQN+ +W E+++N L + AF I + + S
Sbjct: 328 GVILPDIYANAGGVTVSYFEWVQNIQGFMWEEEKVNNELQKYMTKAFHNIKAMCQSHNCS 387
Query: 241 LRTAAFIIGCTRVLQAHKTRG 261
LR AF + RV A RG
Sbjct: 388 LRMGAFTLAVNRVACATTLRG 408
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 165/266 (62%), Gaps = 6/266 (2%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
MSWM+D Y+ + G++TGKP+ GGS GR ATG GV + + A+K+ +++ +K
Sbjct: 155 MSWMVDEYNKLTGQSSIGVITGKPVEFGGSLGRTAATGFGVAVTAREAAAKLGIDMKKAK 214
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAI-----QDDKTTIYNPNGFNIPKLQKYVTFTRSI 115
I++QG GNVGS K G +VA+ + IYN NG + + Y+ ++
Sbjct: 215 IAVQGIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNL 274
Query: 116 KDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDI 175
+F ++I+ +EFW+ DI+IPAA+E+ IT A ++ AK++ E ANGPTT EAD++
Sbjct: 275 LNFPGAKRIS-LEEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPTTPEADEV 333
Query: 176 LRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELAN 235
++GI+L PD++TNAGGV VSYFEWVQNL W+E+E+ + + AF++IW++
Sbjct: 334 FAERGIVLTPDILTNAGGVTVSYFEWVQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIKE 393
Query: 236 TKKVSLRTAAFIIGCTRVLQAHKTRG 261
V++R AA++ +V +A K RG
Sbjct: 394 EYNVTMREAAYMHSIKKVAEAMKLRG 419
>sp|O59650|DHE3_PYRKO Glutamate dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gdhA PE=1 SV=4
Length = 421
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 159/271 (58%), Gaps = 16/271 (5%)
Query: 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIIN 58
M+WMMD Y T P G++TGKP +GG R AT RG + A + + +
Sbjct: 153 MAWMMDEYETIMRRKGPAFGVITGKPPGVGGIVARMDATARGAAFTIREAAKALGWDDLK 212
Query: 59 SK-ISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR--- 113
K I+IQG+GN G + + G K+VA+ D K IYNP+G +P + + + +
Sbjct: 213 GKTIAIQGYGNAGYYLHKIMSEEFGMKVVAVSDSKGGIYNPDG--LPPADEVLKWKKEHG 270
Query: 114 SIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEAD 173
S+KD + I + +E + DIL P+AIE IT NA+NV AKI+ E ANGP T EAD
Sbjct: 271 SVKDMPGTQNITN-EELLELEVDILAPSAIEGVITKENADNVKAKIVAEVANGPVTPEAD 329
Query: 174 DILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWEL 233
+IL +KGI+ PD + NAGGV VSYFEWVQN++ WT +E RL++ + AF W++
Sbjct: 330 EILHEKGILQIPDFLCNAGGVTVSYFEWVQNINGFYWTVEETRKRLDDKMTKAF---WDV 386
Query: 234 ANTKK---VSLRTAAFIIGCTRVLQAHKTRG 261
NT K + +R AA+++ +RV +A K RG
Sbjct: 387 FNTHKEKNIHMRDAAYVVAVSRVYEAMKHRG 417
>sp|P28997|DHE2_PEPAS NAD-specific glutamate dehydrogenase OS=Peptostreptococcus
asaccharolyticus PE=1 SV=1
Length = 421
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 156/267 (58%), Gaps = 7/267 (2%)
Query: 1 MSWMMDTYSTKKNYTIP-GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINS 59
MSW +D Y + G TGKP++ GGS GR +ATG GV ++ + A + + + ++
Sbjct: 154 MSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDA 213
Query: 60 KISIQGFGNVGSVAANLFFKAGAKIVAIQD-DKT----TIYNPNGFNIPKLQKYVTFTRS 114
KI++QGFGNVG+ + G K+ AI + D+ +YN NG + +L Y ++
Sbjct: 214 KIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKT 273
Query: 115 IKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADD 174
+ F E+I D +EFW+ DI++PAA+E+ IT A + AK++ E ANGPTT E D
Sbjct: 274 LIGFPGAERITD-EEFWTKEYDIIVPAALENVITGERAKTINAKLVCEAANGPTTPEGDK 332
Query: 175 ILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELA 234
+L ++GI L PD++TN+GGV+VSY+EWVQN WTE E+ + + A ++ +A
Sbjct: 333 VLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVA 392
Query: 235 NTKKVSLRTAAFIIGCTRVLQAHKTRG 261
+ V+LR A ++ + A K RG
Sbjct: 393 DEYNVTLREAVYMYAIKSIDVAMKLRG 419
>sp|Q9YC65|DHE3_AERPE Glutamate dehydrogenase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=gdhA PE=3
SV=2
Length = 418
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 155/265 (58%), Gaps = 5/265 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
MSW +D Y+ K G+VTGKP+ +GG R +TG GV + A K +
Sbjct: 153 MSWFLDEYNRVKRGQFFGVVTGKPVELGGLNARIVSTGYGVAVSTRVAAEKFLGGLEGRT 212
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+++QG+GNVG AA + GAKIVA+ D + IY+P G + + K T ++ ++
Sbjct: 213 VAVQGYGNVGYYAAKFLAEMGAKIVAVSDSRGGIYDPEGIDPEEALKVKRSTGTVANYQR 272
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+KI+ + E +P DIL+PAAIE+ IT NA+ + AKII EGANGPTTT A+ IL KG
Sbjct: 273 GKKIS-TMEILELPVDILVPAAIEEVITDENADRIKAKIISEGANGPTTTAAEKILVKKG 331
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAI---WEL-ANT 236
+++ PD++ NAGGVI+S+ EWV N T++E +L + + WE
Sbjct: 332 VLVLPDILANAGGVIMSHIEWVNNRMGGWITDEEALKKLEQKMVENTKTVITYWEKNLKP 391
Query: 237 KKVSLRTAAFIIGCTRVLQAHKTRG 261
++ SLR AA++I RV +A K RG
Sbjct: 392 EENSLRDAAYMIAVERVFRAMKLRG 416
>sp|Q9HSM4|DHE42_HALSA NADP-specific glutamate dehydrogenase B OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=gdhB PE=3
SV=1
Length = 429
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 160/262 (61%), Gaps = 1/262 (0%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W MD YS ++ T+PG+VTGKP GGS GR +A GR V I + + ++ I ++
Sbjct: 167 MAWFMDAYSMQQGETVPGVVTGKPPVAGGSHGRAEAPGRSVAIATREAINYYDIPIDDAT 226
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+++QG+G+VG+ AA L GA++VA+ D + + +G + + + ++ +
Sbjct: 227 VAVQGYGSVGANAALLLDDWGARVVAVSDVNGGVLDTDGLDTHAIPSHGNQPAAVMRHDA 286
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
+ + +E + D++IPAA+ + IT NA+ + A I++EGANGPTT+ AD IL ++
Sbjct: 287 PNTLTN-EELLELDVDVVIPAAVGNVITAANADRIQADIVVEGANGPTTSAADRILEERA 345
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240
+ + PD++ NAGGV VSYFEW+Q+++ W+ + + L + + +A++A+ + +S
Sbjct: 346 VPVIPDILANAGGVTVSYFEWLQDINRRTWSPERVRDELESEMLSAWNAVRSEVDDGDLS 405
Query: 241 LRTAAFIIGCTRVLQAHKTRGL 262
R AA+++ R+ +A + RGL
Sbjct: 406 WRDAAYVVALQRIGRAKEARGL 427
>sp|Q54KB7|DHE3_DICDI Glutamate dehydrogenase, mitochondrial OS=Dictyostelium discoideum
GN=gluD PE=1 SV=1
Length = 502
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 132/220 (60%), Gaps = 10/220 (4%)
Query: 1 MSWMMDTYSTKKNYTIPGI--VTGKPISIGGSFGRQKATGRGVF------IIGSKIASKI 52
M+W+ DTY + + VTGKPIS GG GR +ATG GVF + ++ K
Sbjct: 188 MAWIRDTYQAFNTNDVDSMACVTGKPISSGGIRGRTEATGLGVFYGIREFLSYEEVLKKT 247
Query: 53 NLN--IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110
L I I IQGFGNVG AA F +AGAK++A+ + +YN +G NI L KY
Sbjct: 248 GLTPGIKGKSIVIQGFGNVGYFAAKFFEQAGAKVIAVAEHNGAVYNADGLNIDALNKYKL 307
Query: 111 FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTT 170
+ DF I DS + IPCDILIPAA+E QI I N ++ AK+I E ANGP T
Sbjct: 308 QHGTFIDFPGATNIVDSVKALEIPCDILIPAALEKQIHIGNVADIQAKLIGEAANGPMTP 367
Query: 171 EADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
AD IL ++G ++ PD++ NAGGV VSYFEW++NLS++ +
Sbjct: 368 RADQILLNRGHVIIPDLLLNAGGVTVSYFEWLKNLSHVRF 407
>sp|P80053|DHE2_SULSO Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=gdhA-2 PE=1 SV=3
Length = 420
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 151/264 (57%), Gaps = 3/264 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W +D Y + TGKP+ +GG R +TG GV I + A+K + ++
Sbjct: 157 MAWFLDEYIKITGKVDFAVFTGKPVELGGIGVRLYSTGLGVATIAKEAANKFIGGVEEAR 216
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGNVG A + GAKIV + D K + N G ++ K + T S+ ++ E
Sbjct: 217 VIIQGFGNVGYYAGKFLSEMGAKIVGVSDSKGGVINEKGIDVGKAIEIKEKTGSVINYPE 276
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G K+ + +E CDILIPAA+E+ I NA V AK+I+EGANGP T +AD+I+R +G
Sbjct: 277 GRKVTN-EELLISDCDILIPAALENVINKFNAPKVKAKLIVEGANGPLTADADEIMRQRG 335
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK--K 238
I + PD++ NAGGV+ SY EW N + +++E + + + NAF+ +++ K
Sbjct: 336 IAVVPDILANAGGVVGSYVEWANNKMGEIISDEEAKKLIVDRMNNAFNTLYDYHQKKLED 395
Query: 239 VSLRTAAFIIGCTRVLQAHKTRGL 262
LRTAA + RV++A K RG+
Sbjct: 396 HDLRTAAMALAVDRVVRAMKARGI 419
>sp|P39475|DHE4_SULSH NADP-specific glutamate dehydrogenase (Fragment) OS=Sulfolobus
shibatae GN=gdhA PE=3 SV=1
Length = 390
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 149/256 (58%), Gaps = 3/256 (1%)
Query: 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSK 60
M+W +D Y + TGKP +GG R +TG GV I + A+K I S+
Sbjct: 129 MAWFLDEYIKITGEVDFAVFTGKPSELGGIGVRLYSTGLGVATIAREAANKFIGGIEGSR 188
Query: 61 ISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE 120
+ IQGFGNVGS A + GAKI+ + D + + +G ++ K + V T S+ ++ E
Sbjct: 189 VIIQGFGNVGSFTAKFLNEMGAKIIGVSDIGGGVISDDGIDVNKALEVVQSTGSVVNYPE 248
Query: 121 GEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTTTEADDILRDKG 180
G+K+ + +E + CDILIPAA+E+ I NA V AK+I+EGANGP +AD+I++ +G
Sbjct: 249 GKKVTN-EELLTSDCDILIPAAVENVINKFNAPKVKAKLIVEGANGPLAADADEIIKQRG 307
Query: 181 IILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK--K 238
I++ PD++ NAGGV+ SY EW N S + +++E + + + NAF+A++E K
Sbjct: 308 IVVIPDILANAGGVVGSYVEWANNKSGGIISDEEAKKLIIDRMTNAFNALYEFHKRKFAD 367
Query: 239 VSLRTAAFIIGCTRVL 254
LRT A + RV+
Sbjct: 368 QDLRTVAMALRVDRVV 383
>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial OS=Gorilla gorilla gorilla
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 164 bits (414), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK +A+ + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFR 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S + CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKPYEGS--ILEVDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I +++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADRIFQERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial OS=Homo sapiens GN=GLUD2
PE=1 SV=2
Length = 558
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 133/221 (60%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK +A+ + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFK 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S + CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKPYEGS--ILEVDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial OS=Pongo pygmaeus GN=GLUD2
PE=3 SV=1
Length = 558
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVF------IIGSKIASK 51
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + S
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSN 292
Query: 52 INL--NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + + +QGFGNVG + + GAK VA+ + +I+NP+G + +L+ +
Sbjct: 293 VGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFR 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKPYEGS--ILEADCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PDV NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNILVIPDVYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial OS=Pan troglodytes
GN=GLUD2 PE=3 SV=1
Length = 558
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 133/221 (60%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK +A+ + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFRDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFR 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
S+ F + + S I CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSLLGFPKAKPYEGS--ILEIDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNILVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial OS=Hylobates lar GN=GLUD2
PE=3 SV=1
Length = 555
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 132/221 (59%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 230 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 289
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK +A+ + +I+NP+G + +L+ +
Sbjct: 290 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFK 349
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 350 LQHGSILGFPKAKPYEGS--ILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT 407
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 408 PEADKIFLERNIMVIPDLYVNAGGVTVSYFEWLKNLNHVSY 448
>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial OS=Homo sapiens GN=GLUD1
PE=1 SV=2
Length = 558
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 132/221 (59%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK +A+ + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFK 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKPYEGS--ILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus GN=Glud1
PE=1 SV=1
Length = 558
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 131/221 (59%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK V + + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFK 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKVYEGS--ILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus
GN=Glud1 PE=1 SV=2
Length = 558
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 131/221 (59%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK V + + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGLGDKTFVVQGFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFK 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
SI F + + S CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGSILGFPKAKVYEGS--ILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 411 PEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKNLNHVSY 451
>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial OS=Bos taurus GN=GLUD1
PE=1 SV=2
Length = 558
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 131/221 (59%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVFI-IGSKIASKINLNI 56
MSW+ DTY ST +Y I VTGKPIS GG GR ATGRGVF I + I ++I
Sbjct: 233 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSI 292
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + +QGFGNVG + + GAK + + + +I+NP+G + +L+ +
Sbjct: 293 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFK 352
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
+I F + + S + CDILIPAA E Q+T +NA V AKII EGANGPTT
Sbjct: 353 LQHGTILGFPKAKIYEGS--ILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTT 410
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
EAD I ++ I++ PD+ NAGGV VSYFEW+ NL+++ +
Sbjct: 411 PEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSY 451
>sp|Q53199|DHE3_RHISN Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01340 PE=3 SV=1
Length = 443
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 134/243 (55%), Gaps = 13/243 (5%)
Query: 1 MSWMMDTYSTKKN---YTIPGIVTGKPISIGGSFGRQKATGRGV-FIIGSKIASKI---- 52
M+WMMD + T VTGKP+S GG GR ++TGRGV F I S +
Sbjct: 135 MAWMMDEFRRANPTDVVTSGACVTGKPLSKGGIAGRAESTGRGVQFAIQSSLRDTRTPGL 194
Query: 53 --NLNIINSKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
N+ + IQGFGNVG AA + A++ + + + NP G +I L+++
Sbjct: 195 DGRRNLKGASTVIQGFGNVGYHAARFLSEEDDARVTVLAERDGYVANPEGLSIEALKQHQ 254
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
T SI F+ + I PCD+LIPAA+E+ I NA + A +++E ANGP T
Sbjct: 255 IRTGSILGFDGAKSIAGDMCGVEQPCDVLIPAAMENAIHAENAERMKAHLVVEAANGPVT 314
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW--TEQEINLRLNNIICNAF 227
EAD+ILR +G+ + PD+ NAGGV+VSYFE V+NL+++ + E+ R N+ I A
Sbjct: 315 FEADEILRSRGVTILPDLYVNAGGVVVSYFERVKNLTHIPFGLMERRRRERGNHTIATAL 374
Query: 228 DAI 230
+ +
Sbjct: 375 ERM 377
>sp|P82264|DHE3_CHAAC Glutamate dehydrogenase, mitochondrial OS=Chaenocephalus aceratus
GN=glud1 PE=1 SV=1
Length = 504
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 124/221 (56%), Gaps = 13/221 (5%)
Query: 1 MSWMMDTYSTKKNYT---IPGIVTGKPISIGGSFGRQKATGRGVF------IIGSKIASK 51
MSW+ DTY+ +T VTGKPIS GG GR ATGRGVF + + S
Sbjct: 179 MSWIADTYANTIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNEASYMSM 238
Query: 52 INL--NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ L + + IQGFGNVG + + GAK V I + IYN +G + L++Y
Sbjct: 239 VGLTPGVQDKTFVIQGFGNVGLHSMRYLHRFGAKCVGIGEIDGAIYNADGIDPKALEEYK 298
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
+I F + S CDILIPAA E Q+T NNA + AKII EGANGPTT
Sbjct: 299 LQNGTIVGFPGAKPYEGS--ILEADCDILIPAAGEKQLTRNNARRIKAKIIAEGANGPTT 356
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
+AD I + +++ PD+ NAGGV VSYFEW++NL+++ +
Sbjct: 357 PDADKIFLENNVMVIPDMYLNAGGVTVSYFEWLKNLNHVSY 397
>sp|P54385|DHE3_DROME Glutamate dehydrogenase, mitochondrial OS=Drosophila melanogaster
GN=Gdh PE=1 SV=2
Length = 562
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 129/244 (52%), Gaps = 34/244 (13%)
Query: 1 MSWMMDTYSTKKNY---TIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNII 57
MSW+ DTY+ + VTGKPI+ GG GR ATGRGVF + + IN
Sbjct: 224 MSWIADTYAKTIGHLDINAHACVTGKPINQGGIHGRVSATGRGVF---HGLENFINEANY 280
Query: 58 NSKIS-----------IQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQ 106
S+I +QGFGNVG +AGA + + + T+YNP G + L+
Sbjct: 281 MSQIGTTPGWGGKTFIVQGFGNVGLHTTRYLTRAGATCIGVIEHDGTLYNPEGIDPKLLE 340
Query: 107 KYVTFTRSIKDFN-----EGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIIL 161
Y +I + EGE + K CDI IPAA+E IT NAN + AKII
Sbjct: 341 DYKNEHGTIVGYQNAKPYEGENLMFEK------CDIFIPAAVEKVITSENANRIQAKIIA 394
Query: 162 EGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW------TEQEI 215
E ANGPTT AD IL D+ I++ PD+ NAGGV VS+FEW++NL+++ + E+E
Sbjct: 395 EAANGPTTPAADKILIDRNILVIPDLYINAGGVTVSFFEWLKNLNHVSYGRLTFKYERES 454
Query: 216 NLRL 219
N L
Sbjct: 455 NYHL 458
>sp|P00368|DHE3_CHICK Glutamate dehydrogenase 1, mitochondrial OS=Gallus gallus GN=GLUD1
PE=1 SV=1
Length = 503
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 130/221 (58%), Gaps = 14/221 (6%)
Query: 1 MSWMMDTY-STKKNYTI--PGIVTGKPISIGGSFGRQKATGRGVF-IIGSKIASKINLNI 56
MSW+ DTY ST +Y I VT IS GG GR ATGRG+F I + I + ++I
Sbjct: 179 MSWIADTYASTIGHYDINAHACVTKPGISQGGIHGRISATGRGLFGHIENFIENASYMSI 238
Query: 57 I-------NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109
+ + ++QGFGNVG + + GAK VA+ + +I+NP+G + +L+ Y
Sbjct: 239 LGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGEFDGSIWNPDGIDPKELEDYK 298
Query: 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKIILEGANGPTT 169
+I F + +K+ S CDILIPAA E Q+T NA+ V AKII EGANGPTT
Sbjct: 299 LQHGTIMGFPKAQKLEGS--ILETDCDILIPAASEKQLTKANAHKVKAKIIAEGANGPTT 356
Query: 170 TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLW 210
+AD I ++ I++ PD+ NAGGV VS FZ +NL+++ +
Sbjct: 357 PQADKIFLERNIMVIPDLYLNAGGVTVSAFZZ-KNLNHVSY 396
>sp|P00370|DHE4_ECOLI NADP-specific glutamate dehydrogenase OS=Escherichia coli (strain
K12) GN=gdhA PE=1 SV=1
Length = 447
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 19 IVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFF 78
+ TGK +S GGS R +ATG G+ + + + ++S+ G GNV A
Sbjct: 193 VFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAM 252
Query: 79 KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF-------- 130
+ GA+++ D T+ + +GF KL + + IK +G + +KEF
Sbjct: 253 EFGARVITASDSSGTVVDESGFTKEKLARLI----EIKASRDGRVADYAKEFGLVYLEGQ 308
Query: 131 --WSIPCDILIPAAIEDQITINNANNVTA---KIILEGANGPTTTEADDILRDKGIILAP 185
WS+P DI +P A ++++ ++ A+ + A K + EGAN PTT EA ++ + G++ AP
Sbjct: 309 QPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAP 368
Query: 186 DVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT-KKVSLRTA 244
NAGGV S E QN + L W ++++ RL++I+ + A E ++ +
Sbjct: 369 GKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQG 428
Query: 245 AFIIGCTRVLQAHKTRGL 262
A I G +V A +G+
Sbjct: 429 ANIAGFVKVADAMLAQGV 446
>sp|P15111|DHE4_SALTY NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=gdhA PE=3 SV=2
Length = 447
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 19 IVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFF 78
+ TGK +S GGS R +ATG G+ + + L ++++ G GNV A
Sbjct: 193 VFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAM 252
Query: 79 KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF-------- 130
GA++V D T+ + +GF KL + IK +G + ++EF
Sbjct: 253 AFGARVVTASDSSGTVVDESGFTPEKLARLC----EIKASRDGRVADYAREFGLTYLEGQ 308
Query: 131 --WSIPCDILIPAAIEDQITINNANNVTA---KIILEGANGPTTTEADDILRDKGIILAP 185
WS+P DI +P A ++++ ++ A + A K + EGAN PTT EA D+ + G++ AP
Sbjct: 309 QPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAP 368
Query: 186 DVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWEL-ANTKKVSLRTA 244
NAGGV S E QN + L W ++++ RL++I+ + A E + K +
Sbjct: 369 GKAANAGGVATSGLEMAQNAARLSWKAEKVDARLHHIMLDIHHACVEYGGDNKHTNYVQG 428
Query: 245 AFIIGCTRVLQAHKTRGL 262
A I G +V A +G+
Sbjct: 429 ANIAGFVKVADAMLAQGV 446
>sp|Q8Z6F6|DHE4_SALTI NADP-specific glutamate dehydrogenase OS=Salmonella typhi GN=gdhA
PE=3 SV=1
Length = 447
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 19 IVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFF 78
+ TGK +S GGS R +ATG G+ + + L ++++ G GNV A
Sbjct: 193 VFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAM 252
Query: 79 KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF-------- 130
GA++V D T+ + +GF KL + IK +G + ++EF
Sbjct: 253 AFGARVVTASDSSGTVVDESGFTPEKLARLC----EIKASRDGRVADYAREFGLTYLEGQ 308
Query: 131 --WSIPCDILIPAAIEDQITINNANNVTA---KIILEGANGPTTTEADDILRDKGIILAP 185
WS+P DI +P A ++++ ++ A + A K + EGAN PTT EA D+ + G++ AP
Sbjct: 309 QPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAP 368
Query: 186 DVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWEL-ANTKKVSLRTA 244
NAGGV S E QN + L W ++++ RL++I+ + A + + K +
Sbjct: 369 GKAANAGGVATSGLEMAQNAARLSWKAEKVDARLHHIMLDIHHACVKYGGDNKHTNYVQG 428
Query: 245 AFIIGCTRVLQAHKTRGL 262
A I G +V A +G+
Sbjct: 429 ANIAGFVKVADAMLAQGV 446
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,969,270
Number of Sequences: 539616
Number of extensions: 3958029
Number of successful extensions: 11189
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 10917
Number of HSP's gapped (non-prelim): 152
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)