Query psy14499
Match_columns 262
No_of_seqs 177 out of 1432
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 21:20:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k92_A NAD-GDH, NAD-specific g 100.0 5.2E-75 1.8E-79 548.0 26.2 260 1-262 164-423 (424)
2 3aog_A Glutamate dehydrogenase 100.0 9.1E-73 3.1E-77 535.3 29.2 261 1-262 178-438 (440)
3 3aoe_E Glutamate dehydrogenase 100.0 4.9E-72 1.7E-76 528.3 29.5 257 1-262 161-417 (419)
4 2tmg_A Protein (glutamate dehy 100.0 9.6E-72 3.3E-76 526.0 29.5 261 1-262 152-413 (415)
5 1v9l_A Glutamate dehydrogenase 100.0 1.6E-72 5.4E-77 531.9 23.6 261 1-262 153-420 (421)
6 3r3j_A Glutamate dehydrogenase 100.0 4.5E-72 1.5E-76 530.2 25.2 260 1-262 183-455 (456)
7 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 5.1E-72 1.7E-76 529.1 25.1 261 1-262 154-420 (421)
8 3mw9_A GDH 1, glutamate dehydr 100.0 4.1E-71 1.4E-75 527.7 29.7 260 1-262 176-498 (501)
9 2bma_A Glutamate dehydrogenase 100.0 5E-71 1.7E-75 525.2 26.4 260 1-262 196-469 (470)
10 4fcc_A Glutamate dehydrogenase 100.0 6.6E-69 2.3E-73 508.9 26.7 260 1-262 179-449 (450)
11 1bgv_A Glutamate dehydrogenase 100.0 1.7E-68 6E-73 507.1 24.0 261 1-262 173-447 (449)
12 1gtm_A Glutamate dehydrogenase 100.0 1.9E-58 6.6E-63 437.1 27.3 261 1-262 152-416 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 1.5E-52 5.1E-57 388.9 22.0 224 1-260 126-352 (355)
14 1leh_A Leucine dehydrogenase; 100.0 7.8E-50 2.7E-54 372.2 19.8 227 1-262 123-352 (364)
15 3ing_A Homoserine dehydrogenas 98.8 2.6E-08 8.9E-13 91.1 11.1 173 56-239 2-200 (325)
16 1vl6_A Malate oxidoreductase; 98.8 5.7E-08 2E-12 90.5 12.8 127 33-168 167-297 (388)
17 2a9f_A Putative malic enzyme ( 98.7 6E-08 2E-12 90.6 9.9 127 32-166 162-291 (398)
18 2d5c_A AROE, shikimate 5-dehyd 98.5 5.9E-06 2E-10 72.4 18.2 136 45-202 104-244 (263)
19 3n58_A Adenosylhomocysteinase; 98.5 8.5E-07 2.9E-11 84.1 13.1 109 39-168 227-338 (464)
20 3gvp_A Adenosylhomocysteinase 98.5 1.2E-06 4.2E-11 82.7 13.3 110 35-168 200-311 (435)
21 3h9u_A Adenosylhomocysteinase; 98.5 1.5E-06 5.3E-11 82.1 13.7 112 37-172 193-308 (436)
22 2rir_A Dipicolinate synthase, 98.5 3.3E-06 1.1E-10 75.6 15.2 117 50-187 149-270 (300)
23 3do5_A HOM, homoserine dehydro 98.5 8.6E-07 2.9E-11 81.0 11.3 169 59-239 3-199 (327)
24 3d4o_A Dipicolinate synthase s 98.5 1.9E-06 6.3E-11 77.1 12.8 116 48-184 145-263 (293)
25 2o4c_A Erythronate-4-phosphate 98.4 2.1E-06 7.2E-11 80.0 12.7 127 33-184 91-229 (380)
26 2hk9_A Shikimate dehydrogenase 98.4 1.2E-05 4E-10 71.2 16.9 142 37-203 112-258 (275)
27 3nv9_A Malic enzyme; rossmann 98.4 1.7E-06 5.9E-11 81.9 11.6 130 32-171 193-336 (487)
28 3jtm_A Formate dehydrogenase, 98.4 5.8E-06 2E-10 76.2 14.7 110 53-182 159-276 (351)
29 1nyt_A Shikimate 5-dehydrogena 98.4 4.8E-05 1.7E-09 67.1 19.3 129 37-185 102-236 (271)
30 2egg_A AROE, shikimate 5-dehyd 98.3 2.6E-05 8.9E-10 70.0 16.7 129 38-187 124-263 (297)
31 2j6i_A Formate dehydrogenase; 98.3 5E-06 1.7E-10 76.9 12.1 130 33-182 119-277 (364)
32 3o8q_A Shikimate 5-dehydrogena 98.3 4.2E-05 1.4E-09 68.3 17.0 126 38-184 110-242 (281)
33 3oet_A Erythronate-4-phosphate 98.3 1.6E-05 5.5E-10 74.0 14.5 174 34-232 95-282 (381)
34 1gq2_A Malic enzyme; oxidoredu 98.3 8.1E-07 2.8E-11 85.6 5.7 124 32-166 256-397 (555)
35 1o0s_A NAD-ME, NAD-dependent m 98.2 1.2E-06 4E-11 85.1 6.3 124 32-166 294-435 (605)
36 3l6d_A Putative oxidoreductase 98.2 4.7E-05 1.6E-09 68.2 16.2 176 54-249 5-212 (306)
37 3pwz_A Shikimate dehydrogenase 98.2 5.9E-05 2E-09 67.0 16.2 127 38-184 103-236 (272)
38 3c8m_A Homoserine dehydrogenas 98.2 4.6E-06 1.6E-10 76.2 9.0 173 57-239 5-204 (331)
39 1pj3_A NAD-dependent malic enz 98.2 1.1E-06 3.7E-11 85.0 4.8 126 32-166 258-402 (564)
40 2ekl_A D-3-phosphoglycerate de 98.2 6E-05 2.1E-09 68.1 16.2 126 34-181 102-251 (313)
41 1p77_A Shikimate 5-dehydrogena 98.2 6.1E-05 2.1E-09 66.5 15.7 129 38-186 103-238 (272)
42 4g2n_A D-isomer specific 2-hyd 98.1 3.8E-05 1.3E-09 70.6 14.3 108 53-182 168-283 (345)
43 4e5n_A Thermostable phosphite 98.1 1.7E-05 6E-10 72.3 11.8 109 53-182 140-256 (330)
44 2pi1_A D-lactate dehydrogenase 98.1 3.9E-05 1.3E-09 70.1 14.0 107 53-182 136-250 (334)
45 2dvm_A Malic enzyme, 439AA lon 98.1 7.9E-06 2.7E-10 77.4 9.0 142 36-184 164-315 (439)
46 3fbt_A Chorismate mutase and s 98.1 0.00013 4.4E-09 65.2 16.3 124 38-186 106-236 (282)
47 3gg9_A D-3-phosphoglycerate de 98.1 2.5E-05 8.5E-10 72.0 11.8 156 53-231 155-324 (352)
48 2nac_A NAD-dependent formate d 98.1 3.5E-05 1.2E-09 72.0 12.9 110 53-182 186-303 (393)
49 4e21_A 6-phosphogluconate dehy 98.1 1.1E-05 3.6E-10 74.6 9.0 113 56-188 20-141 (358)
50 2w2k_A D-mandelate dehydrogena 98.1 2.4E-05 8E-10 71.9 11.2 156 53-231 158-328 (348)
51 4hy3_A Phosphoglycerate oxidor 98.0 2.8E-05 9.7E-10 72.0 11.5 156 54-231 172-338 (365)
52 3g0o_A 3-hydroxyisobutyrate de 98.0 2.8E-05 9.4E-10 69.4 11.0 109 57-185 6-125 (303)
53 3ond_A Adenosylhomocysteinase; 98.0 5.5E-05 1.9E-09 72.5 13.4 106 40-166 246-354 (488)
54 1mx3_A CTBP1, C-terminal bindi 98.0 3E-05 1E-09 71.3 11.2 157 54-231 164-333 (347)
55 2g76_A 3-PGDH, D-3-phosphoglyc 98.0 0.00013 4.5E-09 66.7 15.3 108 53-182 160-275 (335)
56 3jyo_A Quinate/shikimate dehyd 98.0 0.00013 4.4E-09 65.2 14.8 130 38-185 111-250 (283)
57 4gbj_A 6-phosphogluconate dehy 98.0 9E-05 3.1E-09 66.4 13.7 169 58-248 5-209 (297)
58 1wwk_A Phosphoglycerate dehydr 98.0 5.3E-05 1.8E-09 68.4 11.9 107 54-182 138-252 (307)
59 3pef_A 6-phosphogluconate dehy 98.0 0.00022 7.4E-09 62.9 15.7 169 59-249 2-207 (287)
60 2gcg_A Glyoxylate reductase/hy 98.0 4.8E-05 1.6E-09 69.2 11.3 108 54-182 151-266 (330)
61 1ebf_A Homoserine dehydrogenas 97.9 8.4E-06 2.9E-10 75.3 5.6 171 57-239 3-205 (358)
62 4dll_A 2-hydroxy-3-oxopropiona 97.9 3.1E-05 1.1E-09 69.9 9.1 112 55-186 28-148 (320)
63 3hg7_A D-isomer specific 2-hyd 97.9 7.8E-05 2.7E-09 67.9 11.5 108 53-182 135-250 (324)
64 3evt_A Phosphoglycerate dehydr 97.9 5.2E-05 1.8E-09 69.1 10.2 108 53-182 132-247 (324)
65 1gdh_A D-glycerate dehydrogena 97.9 7.2E-05 2.4E-09 67.9 10.9 154 54-231 142-309 (320)
66 2d0i_A Dehydrogenase; structur 97.9 4.9E-05 1.7E-09 69.3 9.8 107 54-182 142-255 (333)
67 4dgs_A Dehydrogenase; structur 97.9 0.0001 3.5E-09 67.6 11.7 150 53-230 166-329 (340)
68 1v8b_A Adenosylhomocysteinase; 97.9 0.00011 3.8E-09 70.2 12.4 97 51-168 250-348 (479)
69 3obb_A Probable 3-hydroxyisobu 97.9 4.4E-05 1.5E-09 68.7 9.0 168 59-248 4-208 (300)
70 3d64_A Adenosylhomocysteinase; 97.9 9.3E-05 3.2E-09 71.1 11.7 107 51-178 270-380 (494)
71 3k5p_A D-3-phosphoglycerate de 97.9 0.00023 7.7E-09 67.0 14.2 155 53-231 151-321 (416)
72 2h78_A Hibadh, 3-hydroxyisobut 97.9 4.7E-05 1.6E-09 67.6 9.0 107 59-185 4-120 (302)
73 2dbq_A Glyoxylate reductase; D 97.9 0.00036 1.2E-08 63.5 15.0 108 53-182 145-260 (334)
74 3tnl_A Shikimate dehydrogenase 97.8 0.00045 1.5E-08 62.6 15.3 134 38-185 138-284 (315)
75 2yq5_A D-isomer specific 2-hyd 97.8 8.3E-05 2.8E-09 68.3 10.3 106 53-182 143-256 (343)
76 1nvt_A Shikimate 5'-dehydrogen 97.8 0.00055 1.9E-08 60.6 15.3 131 37-185 111-251 (287)
77 3don_A Shikimate dehydrogenase 97.8 4.1E-05 1.4E-09 68.3 7.7 124 38-185 101-231 (277)
78 3mtj_A Homoserine dehydrogenas 97.8 6.7E-05 2.3E-09 71.2 9.4 162 56-239 8-194 (444)
79 3phh_A Shikimate dehydrogenase 97.8 0.00044 1.5E-08 61.4 14.1 118 38-186 106-230 (269)
80 3doj_A AT3G25530, dehydrogenas 97.8 5.3E-05 1.8E-09 67.9 8.1 172 56-249 19-227 (310)
81 3gvx_A Glycerate dehydrogenase 97.8 5.6E-05 1.9E-09 67.8 7.8 103 55-182 119-229 (290)
82 3qha_A Putative oxidoreductase 97.8 2E-05 6.7E-10 70.3 4.8 106 58-184 15-127 (296)
83 4gwg_A 6-phosphogluconate dehy 97.8 8.6E-05 2.9E-09 71.2 9.4 176 57-248 3-221 (484)
84 3ba1_A HPPR, hydroxyphenylpyru 97.7 0.00036 1.2E-08 63.6 13.2 105 53-182 159-271 (333)
85 3ce6_A Adenosylhomocysteinase; 97.7 0.00021 7.3E-09 68.6 12.1 95 53-168 269-365 (494)
86 1qp8_A Formate dehydrogenase; 97.7 0.00054 1.8E-08 61.6 14.1 150 55-231 121-286 (303)
87 1sc6_A PGDH, D-3-phosphoglycer 97.7 0.00061 2.1E-08 63.7 14.7 106 53-182 140-253 (404)
88 1ygy_A PGDH, D-3-phosphoglycer 97.7 0.00027 9.2E-09 68.3 12.5 107 53-181 137-251 (529)
89 2zyd_A 6-phosphogluconate dehy 97.7 9.9E-05 3.4E-09 70.6 9.3 177 55-248 12-231 (480)
90 1gpj_A Glutamyl-tRNA reductase 97.7 0.00052 1.8E-08 63.9 13.6 110 55-187 164-289 (404)
91 2i99_A MU-crystallin homolog; 97.7 0.00023 8E-09 64.0 10.8 117 50-186 128-249 (312)
92 3d1l_A Putative NADP oxidoredu 97.7 8.8E-05 3E-09 64.5 7.6 96 54-168 6-106 (266)
93 3pp8_A Glyoxylate/hydroxypyruv 97.7 0.00029 9.8E-09 63.9 11.1 108 53-182 134-249 (315)
94 3pid_A UDP-glucose 6-dehydroge 97.7 0.001 3.4E-08 62.9 15.1 126 50-189 28-180 (432)
95 3dtt_A NADP oxidoreductase; st 97.7 8.3E-05 2.8E-09 64.4 7.2 96 52-166 13-126 (245)
96 3pdu_A 3-hydroxyisobutyrate de 97.7 4.6E-05 1.6E-09 67.3 5.5 170 59-250 2-208 (287)
97 3oj0_A Glutr, glutamyl-tRNA re 97.6 0.00021 7.3E-09 56.5 8.8 89 58-165 21-111 (144)
98 3ezy_A Dehydrogenase; structur 97.6 0.00016 5.4E-09 65.5 8.7 128 59-203 3-138 (344)
99 3t4e_A Quinate/shikimate dehyd 97.6 0.00058 2E-08 61.8 12.3 130 38-185 132-278 (312)
100 3db2_A Putative NADPH-dependen 97.6 0.00038 1.3E-08 63.2 11.1 129 57-203 4-140 (354)
101 2ho3_A Oxidoreductase, GFO/IDH 97.6 0.00049 1.7E-08 61.7 11.6 127 59-203 2-136 (325)
102 3tum_A Shikimate dehydrogenase 97.6 0.0014 4.8E-08 58.1 14.3 129 38-185 109-246 (269)
103 3c85_A Putative glutathione-re 97.6 0.00018 6.1E-09 59.0 8.0 111 55-184 36-156 (183)
104 2cuk_A Glycerate dehydrogenase 97.6 0.00054 1.8E-08 61.8 11.8 100 54-181 140-247 (311)
105 2glx_A 1,5-anhydro-D-fructose 97.6 0.00028 9.6E-09 63.2 9.7 125 59-203 1-136 (332)
106 1lss_A TRK system potassium up 97.6 0.00017 5.9E-09 55.6 7.3 108 57-182 3-117 (140)
107 3cky_A 2-hydroxymethyl glutara 97.6 0.00016 5.5E-09 63.8 7.9 107 58-184 4-120 (301)
108 3llv_A Exopolyphosphatase-rela 97.6 0.00017 6E-09 56.4 7.3 106 57-182 5-118 (141)
109 2iz1_A 6-phosphogluconate dehy 97.6 0.00015 5E-09 69.1 8.0 174 58-248 5-222 (474)
110 4hkt_A Inositol 2-dehydrogenas 97.6 0.00058 2E-08 61.3 11.5 126 59-203 4-137 (331)
111 1npy_A Hypothetical shikimate 97.6 0.0029 9.8E-08 56.0 15.8 127 36-187 102-236 (271)
112 1dxy_A D-2-hydroxyisocaproate 97.6 0.0012 4.1E-08 60.1 13.6 106 53-182 140-253 (333)
113 3e9m_A Oxidoreductase, GFO/IDH 97.6 0.00038 1.3E-08 62.7 10.2 131 56-203 3-141 (330)
114 3uuw_A Putative oxidoreductase 97.5 0.00025 8.4E-09 63.1 8.7 126 56-200 4-137 (308)
115 3qy9_A DHPR, dihydrodipicolina 97.5 0.00023 8E-09 62.2 8.4 102 59-189 4-111 (243)
116 3kb6_A D-lactate dehydrogenase 97.5 0.00036 1.2E-08 63.7 10.0 106 53-181 136-249 (334)
117 4dio_A NAD(P) transhydrogenase 97.5 0.00028 9.5E-09 66.1 9.3 116 56-184 188-336 (405)
118 3cea_A MYO-inositol 2-dehydrog 97.5 0.00072 2.5E-08 60.9 11.7 128 56-203 6-146 (346)
119 3euw_A MYO-inositol dehydrogen 97.5 0.00059 2E-08 61.6 11.0 128 58-203 4-139 (344)
120 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.5 0.00019 6.6E-09 68.4 8.1 177 59-248 2-220 (478)
121 3fwz_A Inner membrane protein 97.5 0.00022 7.6E-09 56.2 7.1 106 58-183 7-121 (140)
122 1xdw_A NAD+-dependent (R)-2-hy 97.5 0.00021 7.1E-09 65.1 7.9 105 54-182 142-254 (331)
123 4fb5_A Probable oxidoreductase 97.5 0.00081 2.8E-08 61.0 11.5 132 55-203 22-168 (393)
124 3rc1_A Sugar 3-ketoreductase; 97.5 0.00067 2.3E-08 61.7 10.9 130 56-203 25-163 (350)
125 2pgd_A 6-phosphogluconate dehy 97.5 0.0003 1E-08 67.1 8.7 173 59-248 3-219 (482)
126 3q2i_A Dehydrogenase; rossmann 97.5 0.00066 2.2E-08 61.6 10.5 128 57-202 12-148 (354)
127 2ejw_A HDH, homoserine dehydro 97.4 6.6E-05 2.3E-09 68.6 3.7 93 58-172 3-106 (332)
128 3p2y_A Alanine dehydrogenase/p 97.4 0.00074 2.5E-08 62.8 10.8 116 56-184 182-326 (381)
129 1vpd_A Tartronate semialdehyde 97.4 0.0003 1E-08 61.9 7.8 106 59-184 6-121 (299)
130 2p4q_A 6-phosphogluconate dehy 97.4 0.0003 1E-08 67.6 8.3 175 57-248 9-226 (497)
131 1a4i_A Methylenetetrahydrofola 97.4 0.0011 3.7E-08 59.7 11.2 96 33-168 144-241 (301)
132 3l9w_A Glutathione-regulated p 97.4 0.0027 9.4E-08 59.4 14.1 149 58-233 4-163 (413)
133 3e18_A Oxidoreductase; dehydro 97.4 0.0012 4E-08 60.3 11.3 113 56-187 3-123 (359)
134 3upl_A Oxidoreductase; rossman 97.4 0.00018 6.3E-09 68.2 5.9 145 47-203 12-180 (446)
135 2ahr_A Putative pyrroline carb 97.4 0.00058 2E-08 59.0 8.7 104 59-183 4-108 (259)
136 1yqg_A Pyrroline-5-carboxylate 97.4 0.00086 2.9E-08 57.9 9.7 97 59-176 1-100 (263)
137 4had_A Probable oxidoreductase 97.3 0.0013 4.5E-08 59.3 11.1 128 59-203 24-160 (350)
138 4ezb_A Uncharacterized conserv 97.3 0.00075 2.6E-08 60.7 9.4 116 58-188 24-147 (317)
139 1j4a_A D-LDH, D-lactate dehydr 97.3 0.00033 1.1E-08 63.8 7.0 106 54-182 142-255 (333)
140 2cvz_A Dehydrogenase, 3-hydrox 97.3 0.0004 1.4E-08 60.7 7.3 106 59-186 2-114 (289)
141 3mz0_A Inositol 2-dehydrogenas 97.3 0.0014 4.9E-08 59.1 11.0 129 59-203 3-141 (344)
142 3ec7_A Putative dehydrogenase; 97.3 0.001 3.5E-08 60.6 9.9 113 55-183 20-141 (357)
143 2g1u_A Hypothetical protein TM 97.3 0.00018 6E-09 57.7 4.2 110 52-182 13-133 (155)
144 3kux_A Putative oxidoreductase 97.3 0.0019 6.6E-08 58.5 11.7 127 57-203 6-141 (352)
145 2dc1_A L-aspartate dehydrogena 97.3 0.00039 1.3E-08 59.7 6.7 98 59-183 1-105 (236)
146 1omo_A Alanine dehydrogenase; 97.3 0.0012 4.3E-08 59.6 10.1 132 36-184 104-238 (322)
147 4gqa_A NAD binding oxidoreduct 97.3 0.0013 4.4E-08 60.9 10.4 129 58-203 26-170 (412)
148 3u62_A Shikimate dehydrogenase 97.3 0.00068 2.3E-08 59.5 8.0 123 38-187 95-222 (253)
149 3b1f_A Putative prephenate deh 97.3 0.00081 2.8E-08 59.1 8.4 109 58-185 6-124 (290)
150 3qsg_A NAD-binding phosphogluc 97.2 0.00079 2.7E-08 60.4 8.2 112 57-188 23-145 (312)
151 1p9l_A Dihydrodipicolinate red 97.2 0.003 1E-07 55.2 11.6 82 59-176 1-87 (245)
152 3gg2_A Sugar dehydrogenase, UD 97.2 0.016 5.5E-07 54.7 17.5 179 59-250 3-249 (450)
153 4h3v_A Oxidoreductase domain p 97.2 0.0015 5.1E-08 59.2 10.0 132 55-203 3-152 (390)
154 3ohs_X Trans-1,2-dihydrobenzen 97.2 0.0028 9.5E-08 56.9 11.5 125 59-203 3-140 (334)
155 1h6d_A Precursor form of gluco 97.2 0.0012 4.2E-08 61.9 9.5 132 56-203 81-224 (433)
156 2gf2_A Hibadh, 3-hydroxyisobut 97.2 0.00062 2.1E-08 59.8 7.0 106 59-184 1-116 (296)
157 1zh8_A Oxidoreductase; TM0312, 97.2 0.0026 8.9E-08 57.5 11.1 131 56-203 16-156 (340)
158 3tri_A Pyrroline-5-carboxylate 97.2 0.00089 3E-08 59.2 7.8 102 57-177 2-111 (280)
159 1u8f_O GAPDH, glyceraldehyde-3 97.2 0.0038 1.3E-07 56.9 12.1 97 59-164 4-124 (335)
160 1x7d_A Ornithine cyclodeaminas 97.2 0.0016 5.6E-08 59.6 9.7 117 56-188 127-250 (350)
161 2p2s_A Putative oxidoreductase 97.2 0.0015 5.1E-08 58.7 9.3 111 56-186 2-123 (336)
162 3gdo_A Uncharacterized oxidore 97.2 0.0028 9.7E-08 57.6 11.2 127 57-203 4-139 (358)
163 3gt0_A Pyrroline-5-carboxylate 97.2 0.0011 3.8E-08 57.1 8.0 109 59-187 3-122 (247)
164 1tlt_A Putative oxidoreductase 97.2 0.00075 2.6E-08 60.2 7.1 113 57-189 4-125 (319)
165 3l07_A Bifunctional protein fo 97.1 0.0013 4.4E-08 58.8 8.4 96 32-167 139-236 (285)
166 3u3x_A Oxidoreductase; structu 97.1 0.0015 5.1E-08 59.6 9.1 130 57-203 25-163 (361)
167 3c1a_A Putative oxidoreductase 97.1 0.00039 1.3E-08 62.1 4.8 110 57-189 9-129 (315)
168 3p2o_A Bifunctional protein fo 97.1 0.0014 4.9E-08 58.5 8.4 96 33-168 139-236 (285)
169 2uyy_A N-PAC protein; long-cha 97.1 0.00083 2.9E-08 59.8 6.9 108 58-185 30-147 (316)
170 3e82_A Putative oxidoreductase 97.1 0.0026 9.1E-08 58.0 10.4 127 57-203 6-141 (364)
171 2hmt_A YUAA protein; RCK, KTN, 97.1 0.00049 1.7E-08 53.2 4.4 33 56-89 4-36 (144)
172 4a5o_A Bifunctional protein fo 97.1 0.0016 5.5E-08 58.2 8.3 97 32-168 139-237 (286)
173 2f1k_A Prephenate dehydrogenas 97.1 0.0039 1.3E-07 54.2 10.7 89 59-167 1-94 (279)
174 1l7d_A Nicotinamide nucleotide 97.1 0.0022 7.4E-08 59.3 9.5 35 55-90 169-203 (384)
175 4huj_A Uncharacterized protein 97.0 0.00086 2.9E-08 57.0 6.2 91 58-167 23-116 (220)
176 2g82_O GAPDH, glyceraldehyde-3 97.0 0.0079 2.7E-07 54.8 12.9 96 59-164 1-119 (331)
177 1j5p_A Aspartate dehydrogenase 97.0 0.0015 5.1E-08 57.5 7.8 99 57-183 11-115 (253)
178 2ixa_A Alpha-N-acetylgalactosa 97.0 0.0034 1.2E-07 58.8 10.7 114 56-184 18-146 (444)
179 4a26_A Putative C-1-tetrahydro 97.0 0.002 6.7E-08 58.0 8.6 54 32-90 143-197 (300)
180 1ydw_A AX110P-like protein; st 97.0 0.0026 9E-08 57.8 9.4 111 57-184 5-126 (362)
181 3ijp_A DHPR, dihydrodipicolina 97.0 0.00045 1.5E-08 61.9 4.1 119 57-189 20-147 (288)
182 3moi_A Probable dehydrogenase; 97.0 0.0029 1E-07 58.2 9.8 128 58-203 2-138 (387)
183 3m2t_A Probable dehydrogenase; 97.0 0.0011 3.8E-08 60.4 6.9 116 56-188 3-127 (359)
184 1x13_A NAD(P) transhydrogenase 97.0 0.0019 6.4E-08 60.3 8.5 34 56-90 170-203 (401)
185 1dih_A Dihydrodipicolinate red 97.0 0.00028 9.6E-09 62.6 2.8 115 57-187 4-129 (273)
186 3l4b_C TRKA K+ channel protien 97.0 0.00094 3.2E-08 56.3 5.9 106 59-182 1-114 (218)
187 1yb4_A Tartronic semialdehyde 97.0 0.00046 1.6E-08 60.6 3.9 105 59-184 4-118 (295)
188 1bg6_A N-(1-D-carboxylethyl)-L 97.0 0.0032 1.1E-07 56.6 9.6 110 58-180 4-126 (359)
189 3ggo_A Prephenate dehydrogenas 97.0 0.004 1.4E-07 56.0 10.2 93 56-166 31-130 (314)
190 1b0a_A Protein (fold bifunctio 97.0 0.002 6.9E-08 57.6 8.0 97 32-168 137-235 (288)
191 3evn_A Oxidoreductase, GFO/IDH 97.0 0.0011 3.8E-08 59.5 6.4 131 56-203 3-141 (329)
192 3fhl_A Putative oxidoreductase 96.9 0.0029 9.8E-08 57.6 9.1 128 56-203 3-139 (362)
193 2g5c_A Prephenate dehydrogenas 96.9 0.0055 1.9E-07 53.4 10.5 91 59-168 2-100 (281)
194 1xea_A Oxidoreductase, GFO/IDH 96.9 0.0066 2.3E-07 54.2 11.1 108 59-187 3-121 (323)
195 3ic5_A Putative saccharopine d 96.9 0.0015 5.2E-08 48.6 5.7 42 57-109 4-46 (118)
196 1rm4_O Glyceraldehyde 3-phosph 96.9 0.014 4.9E-07 53.2 13.2 96 59-164 2-123 (337)
197 3btv_A Galactose/lactose metab 96.9 0.0012 3.9E-08 62.1 6.1 129 57-203 19-169 (438)
198 3bio_A Oxidoreductase, GFO/IDH 96.9 0.0033 1.1E-07 56.2 8.8 105 57-184 8-121 (304)
199 1z82_A Glycerol-3-phosphate de 96.9 0.0081 2.8E-07 53.9 11.5 95 57-166 13-113 (335)
200 2o7s_A DHQ-SDH PR, bifunctiona 96.9 0.03 1E-06 53.8 16.0 131 37-184 334-480 (523)
201 4f3y_A DHPR, dihydrodipicolina 96.9 0.00047 1.6E-08 61.2 3.1 118 56-189 5-132 (272)
202 2eez_A Alanine dehydrogenase; 96.9 0.002 6.8E-08 59.2 7.3 85 55-155 163-256 (369)
203 2yyy_A Glyceraldehyde-3-phosph 96.8 0.0017 5.7E-08 59.5 6.3 32 59-90 3-35 (343)
204 2z2v_A Hypothetical protein PH 96.8 0.0012 4.3E-08 60.7 5.4 122 54-191 12-136 (365)
205 2d2i_A Glyceraldehyde 3-phosph 96.8 0.016 5.4E-07 53.8 12.8 96 59-164 3-124 (380)
206 2czc_A Glyceraldehyde-3-phosph 96.8 0.00098 3.3E-08 60.6 4.6 95 59-165 3-112 (334)
207 3b1j_A Glyceraldehyde 3-phosph 96.8 0.022 7.6E-07 52.0 13.6 96 59-164 3-124 (339)
208 3abi_A Putative uncharacterize 96.8 0.0022 7.6E-08 58.5 7.0 123 55-196 13-140 (365)
209 2nvw_A Galactose/lactose metab 96.8 0.005 1.7E-07 58.6 9.6 129 57-203 38-189 (479)
210 1ff9_A Saccharopine reductase; 96.8 0.0033 1.1E-07 59.4 8.2 120 57-191 2-127 (450)
211 2q3e_A UDP-glucose 6-dehydroge 96.8 0.082 2.8E-06 49.8 17.9 30 59-89 6-37 (467)
212 2vhw_A Alanine dehydrogenase; 96.8 0.0019 6.7E-08 59.5 6.4 95 55-164 165-268 (377)
213 3h9e_O Glyceraldehyde-3-phosph 96.7 0.042 1.4E-06 50.3 15.1 99 57-164 6-127 (346)
214 3cps_A Glyceraldehyde 3-phosph 96.7 0.016 5.3E-07 53.3 12.3 98 58-164 17-138 (354)
215 1f06_A MESO-diaminopimelate D- 96.7 0.0028 9.6E-08 57.1 6.9 93 57-172 2-98 (320)
216 1hdg_O Holo-D-glyceraldehyde-3 96.7 0.024 8.1E-07 51.6 13.0 96 59-164 1-122 (332)
217 3c24_A Putative oxidoreductase 96.7 0.0068 2.3E-07 53.2 9.0 87 59-167 12-104 (286)
218 4e12_A Diketoreductase; oxidor 96.6 0.0041 1.4E-07 54.7 7.4 40 59-109 5-44 (283)
219 1id1_A Putative potassium chan 96.6 0.0037 1.3E-07 49.6 6.5 108 57-182 2-120 (153)
220 3ngx_A Bifunctional protein fo 96.6 0.0054 1.8E-07 54.5 8.1 94 32-167 130-225 (276)
221 3g79_A NDP-N-acetyl-D-galactos 96.6 0.17 5.8E-06 48.2 19.0 32 57-89 17-50 (478)
222 1dlj_A UDP-glucose dehydrogena 96.6 0.011 3.6E-07 55.0 10.5 117 59-188 1-143 (402)
223 2c2x_A Methylenetetrahydrofola 96.6 0.0047 1.6E-07 55.1 7.6 96 32-167 136-235 (281)
224 3k96_A Glycerol-3-phosphate de 96.6 0.0044 1.5E-07 56.8 7.6 100 56-167 27-136 (356)
225 2dpo_A L-gulonate 3-dehydrogen 96.6 0.0042 1.4E-07 56.2 7.4 42 57-109 5-46 (319)
226 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0036 1.2E-07 54.0 6.6 98 54-167 27-124 (223)
227 1b7g_O Protein (glyceraldehyde 96.6 0.0054 1.8E-07 56.0 8.1 94 59-165 2-110 (340)
228 2vns_A Metalloreductase steap3 96.6 0.0057 2E-07 51.6 7.8 90 57-168 27-119 (215)
229 1obf_O Glyceraldehyde 3-phosph 96.6 0.03 1E-06 51.1 12.9 96 59-164 2-124 (335)
230 3i23_A Oxidoreductase, GFO/IDH 96.6 0.009 3.1E-07 54.0 9.4 127 59-202 3-138 (349)
231 3v5n_A Oxidoreductase; structu 96.6 0.016 5.3E-07 53.9 11.1 133 56-203 35-184 (417)
232 4ew6_A D-galactose-1-dehydroge 96.5 0.0087 3E-07 53.9 9.1 37 55-91 22-60 (330)
233 3cmc_O GAPDH, glyceraldehyde-3 96.5 0.026 8.9E-07 51.4 12.1 96 59-164 2-121 (334)
234 1edz_A 5,10-methylenetetrahydr 96.5 0.0066 2.3E-07 55.1 8.0 141 32-198 146-302 (320)
235 1zej_A HBD-9, 3-hydroxyacyl-CO 96.5 0.0099 3.4E-07 53.1 9.1 74 57-146 11-85 (293)
236 2axq_A Saccharopine dehydrogen 96.5 0.0024 8.3E-08 60.7 5.3 125 52-192 17-148 (467)
237 3hja_A GAPDH, glyceraldehyde-3 96.5 0.021 7.3E-07 52.4 11.3 44 57-109 20-63 (356)
238 3o9z_A Lipopolysaccaride biosy 96.5 0.0086 2.9E-07 53.5 8.6 111 59-187 4-130 (312)
239 3dty_A Oxidoreductase, GFO/IDH 96.5 0.011 3.8E-07 54.4 9.6 133 56-203 10-159 (398)
240 2izz_A Pyrroline-5-carboxylate 96.5 0.0067 2.3E-07 54.4 7.9 102 57-178 21-132 (322)
241 3oa2_A WBPB; oxidoreductase, s 96.5 0.0091 3.1E-07 53.5 8.7 127 59-203 4-147 (318)
242 2ew2_A 2-dehydropantoate 2-red 96.5 0.0086 2.9E-07 52.4 8.3 108 59-179 4-124 (316)
243 4g65_A TRK system potassium up 96.5 0.0012 4E-08 62.8 2.8 95 58-167 3-105 (461)
244 3e5r_O PP38, glyceraldehyde-3- 96.4 0.028 9.4E-07 51.3 11.8 97 59-164 4-126 (337)
245 1mv8_A GMD, GDP-mannose 6-dehy 96.4 0.012 4.1E-07 55.0 9.4 75 59-146 1-88 (436)
246 2x5j_O E4PDH, D-erythrose-4-ph 96.4 0.049 1.7E-06 49.6 13.1 97 59-165 3-126 (339)
247 4b4u_A Bifunctional protein fo 96.4 0.034 1.2E-06 49.9 11.7 54 32-90 157-211 (303)
248 2ep7_A GAPDH, glyceraldehyde-3 96.4 0.022 7.4E-07 52.1 10.6 96 59-164 3-122 (342)
249 3f4l_A Putative oxidoreductase 96.4 0.007 2.4E-07 54.6 7.2 123 59-202 3-138 (345)
250 1f0y_A HCDH, L-3-hydroxyacyl-C 96.3 0.009 3.1E-07 52.8 7.7 30 59-89 16-45 (302)
251 1pjc_A Protein (L-alanine dehy 96.3 0.0067 2.3E-07 55.5 6.9 93 56-164 165-267 (361)
252 1y81_A Conserved hypothetical 96.3 0.025 8.7E-07 44.7 9.4 114 53-197 8-130 (138)
253 1cf2_P Protein (glyceraldehyde 96.3 0.0017 5.9E-08 59.2 2.7 95 59-165 2-111 (337)
254 3h8v_A Ubiquitin-like modifier 96.3 0.0042 1.4E-07 55.7 5.2 48 43-90 16-68 (292)
255 3ktd_A Prephenate dehydrogenas 96.2 0.0083 2.8E-07 54.8 7.1 107 57-185 7-122 (341)
256 1nvm_B Acetaldehyde dehydrogen 96.2 0.0046 1.6E-07 55.8 5.2 81 57-154 3-90 (312)
257 4a7p_A UDP-glucose dehydrogena 96.2 0.14 5E-06 48.2 15.6 182 57-251 7-254 (446)
258 2nu8_A Succinyl-COA ligase [AD 96.1 0.016 5.4E-07 51.5 8.3 109 57-187 6-123 (288)
259 2raf_A Putative dinucleotide-b 96.1 0.02 7E-07 48.0 8.6 36 53-89 14-49 (209)
260 1gad_O D-glyceraldehyde-3-phos 96.1 0.046 1.6E-06 49.6 11.4 93 59-161 2-117 (330)
261 2rcy_A Pyrroline carboxylate r 96.1 0.0049 1.7E-07 53.0 4.7 105 57-188 3-117 (262)
262 1i36_A Conserved hypothetical 96.0 0.017 5.9E-07 49.6 7.8 87 59-166 1-90 (264)
263 1r0k_A 1-deoxy-D-xylulose 5-ph 96.0 0.017 5.9E-07 53.6 8.1 116 59-186 5-149 (388)
264 2b4r_O Glyceraldehyde-3-phosph 95.9 0.077 2.6E-06 48.5 12.0 102 54-164 7-132 (345)
265 3ojo_A CAP5O; rossmann fold, c 95.9 1 3.5E-05 42.2 19.9 43 57-110 10-52 (431)
266 2i76_A Hypothetical protein; N 95.9 0.0078 2.7E-07 52.7 5.0 68 59-146 3-70 (276)
267 1np3_A Ketol-acid reductoisome 95.9 0.0069 2.4E-07 54.9 4.8 33 56-89 14-46 (338)
268 2d59_A Hypothetical protein PH 95.9 0.06 2.1E-06 42.7 9.8 109 58-196 22-137 (144)
269 1txg_A Glycerol-3-phosphate de 95.9 0.02 7E-07 50.7 7.7 107 59-178 1-124 (335)
270 3ado_A Lambda-crystallin; L-gu 95.8 0.027 9.4E-07 50.9 8.3 33 56-89 4-36 (319)
271 1x0v_A GPD-C, GPDH-C, glycerol 95.8 0.014 4.7E-07 52.5 6.3 103 57-167 7-127 (354)
272 1yqd_A Sinapyl alcohol dehydro 95.8 0.05 1.7E-06 49.3 10.1 120 48-185 178-304 (366)
273 2y0c_A BCEC, UDP-glucose dehyd 95.8 0.029 1E-06 53.3 8.8 43 57-110 7-49 (478)
274 1evy_A Glycerol-3-phosphate de 95.7 0.015 5.2E-07 52.7 6.4 99 55-166 11-126 (366)
275 1jay_A Coenzyme F420H2:NADP+ o 95.7 0.0091 3.1E-07 49.6 4.4 94 59-166 1-99 (212)
276 3oqb_A Oxidoreductase; structu 95.7 0.049 1.7E-06 49.6 9.7 129 55-203 3-157 (383)
277 3mog_A Probable 3-hydroxybutyr 95.7 0.023 7.7E-07 54.2 7.7 42 58-110 5-46 (483)
278 1lu9_A Methylene tetrahydromet 95.7 0.046 1.6E-06 48.0 9.2 49 37-89 101-150 (287)
279 3pym_A GAPDH 3, glyceraldehyde 95.6 0.33 1.1E-05 44.1 14.8 97 59-164 2-122 (332)
280 2o3j_A UDP-glucose 6-dehydroge 95.5 0.038 1.3E-06 52.5 8.6 40 59-109 10-51 (481)
281 3two_A Mannitol dehydrogenase; 95.5 0.11 3.7E-06 46.6 11.2 110 57-185 176-290 (348)
282 4g65_A TRK system potassium up 95.5 0.038 1.3E-06 52.2 8.5 118 45-183 221-349 (461)
283 2aef_A Calcium-gated potassium 95.5 0.011 3.7E-07 50.1 4.2 103 57-182 8-120 (234)
284 3e8x_A Putative NAD-dependent 95.4 0.047 1.6E-06 45.7 8.0 35 55-89 18-53 (236)
285 1jw9_B Molybdopterin biosynthe 95.4 0.0034 1.2E-07 54.6 0.9 36 56-91 29-64 (249)
286 3hwr_A 2-dehydropantoate 2-red 95.4 0.06 2.1E-06 48.0 9.1 100 54-169 15-125 (318)
287 2duw_A Putative COA-binding pr 95.4 0.077 2.6E-06 42.1 8.8 110 58-196 13-130 (145)
288 3ip3_A Oxidoreductase, putativ 95.4 0.023 7.7E-07 51.0 6.2 133 58-203 2-143 (337)
289 3doc_A Glyceraldehyde 3-phosph 95.4 0.28 9.4E-06 44.6 13.3 96 59-164 3-124 (335)
290 3hdj_A Probable ornithine cycl 95.4 0.028 9.4E-07 50.6 6.6 148 21-189 88-239 (313)
291 2cf5_A Atccad5, CAD, cinnamyl 95.3 0.21 7.1E-06 45.0 12.4 117 49-184 172-296 (357)
292 3ff4_A Uncharacterized protein 95.2 0.12 4.3E-06 40.0 9.2 108 58-196 4-117 (122)
293 1yj8_A Glycerol-3-phosphate de 95.2 0.021 7.3E-07 52.0 5.6 100 59-166 22-143 (375)
294 3ghy_A Ketopantoate reductase 95.2 0.03 1E-06 50.3 6.3 93 58-166 3-106 (335)
295 1oi7_A Succinyl-COA synthetase 95.2 0.037 1.3E-06 49.2 6.8 126 57-204 6-166 (288)
296 3rwb_A TPLDH, pyridoxal 4-dehy 95.1 0.05 1.7E-06 46.4 7.2 46 55-111 3-49 (247)
297 4gmf_A Yersiniabactin biosynth 95.1 0.073 2.5E-06 49.0 8.7 106 57-184 6-123 (372)
298 3k6j_A Protein F01G10.3, confi 95.0 0.089 3E-06 49.9 9.3 30 59-89 55-84 (460)
299 4dib_A GAPDH, glyceraldehyde 3 95.0 0.25 8.5E-06 45.1 11.8 96 59-164 5-124 (345)
300 4ina_A Saccharopine dehydrogen 95.0 0.037 1.3E-06 51.3 6.5 120 59-192 2-145 (405)
301 2qyt_A 2-dehydropantoate 2-red 95.0 0.019 6.5E-07 50.5 4.2 96 59-169 9-122 (317)
302 3lvf_P GAPDH 1, glyceraldehyde 94.9 0.5 1.7E-05 43.0 13.5 97 58-164 4-124 (338)
303 3keo_A Redox-sensing transcrip 94.9 0.011 3.7E-07 50.6 2.3 52 37-89 64-117 (212)
304 4ej6_A Putative zinc-binding d 94.9 0.27 9.2E-06 44.6 11.9 123 49-185 175-308 (370)
305 1zcj_A Peroxisomal bifunctiona 94.8 0.14 4.7E-06 48.3 10.1 31 58-89 37-67 (463)
306 2d8a_A PH0655, probable L-thre 94.8 0.13 4.3E-06 46.1 9.4 31 57-87 167-198 (348)
307 3lk7_A UDP-N-acetylmuramoylala 94.8 0.089 3.1E-06 49.3 8.6 35 55-90 6-40 (451)
308 4e6p_A Probable sorbitol dehyd 94.7 0.046 1.6E-06 46.9 6.0 46 55-111 5-51 (259)
309 1lc0_A Biliverdin reductase A; 94.7 0.21 7.2E-06 43.9 10.4 120 56-202 5-138 (294)
310 3v1y_O PP38, glyceraldehyde-3- 94.7 0.41 1.4E-05 43.6 12.3 98 58-164 3-126 (337)
311 4b7c_A Probable oxidoreductase 94.6 0.13 4.3E-06 45.8 8.8 77 57-144 149-228 (336)
312 3kkj_A Amine oxidase, flavin-c 94.6 0.038 1.3E-06 44.6 4.9 31 59-90 3-33 (336)
313 3vku_A L-LDH, L-lactate dehydr 94.6 0.14 4.7E-06 46.4 9.0 76 56-143 7-85 (326)
314 1iuk_A Hypothetical protein TT 94.6 0.3 1E-05 38.4 10.0 113 57-198 12-132 (140)
315 3d3w_A L-xylulose reductase; u 94.6 0.09 3.1E-06 44.1 7.3 35 54-89 3-38 (244)
316 2dt5_A AT-rich DNA-binding pro 94.5 0.022 7.6E-07 48.5 3.4 77 50-145 73-151 (211)
317 1kyq_A Met8P, siroheme biosynt 94.5 0.038 1.3E-06 48.9 5.0 35 54-89 9-43 (274)
318 2qrj_A Saccharopine dehydrogen 94.5 0.17 5.8E-06 47.0 9.5 77 57-164 213-300 (394)
319 3ip1_A Alcohol dehydrogenase, 94.4 0.31 1E-05 44.7 11.2 33 56-89 212-245 (404)
320 1pl8_A Human sorbitol dehydrog 94.4 0.63 2.2E-05 41.7 13.0 38 49-87 164-202 (356)
321 1cyd_A Carbonyl reductase; sho 94.3 0.1 3.4E-06 43.7 7.1 35 54-89 3-38 (244)
322 2wtb_A MFP2, fatty acid multif 94.3 0.12 4.3E-06 51.5 8.8 30 59-89 313-342 (725)
323 2pv7_A T-protein [includes: ch 94.3 0.088 3E-06 46.5 6.9 33 57-90 20-53 (298)
324 2ozp_A N-acetyl-gamma-glutamyl 94.3 0.055 1.9E-06 49.3 5.6 32 59-90 5-38 (345)
325 3h5n_A MCCB protein; ubiquitin 94.2 0.076 2.6E-06 48.5 6.6 35 56-90 116-150 (353)
326 1xyg_A Putative N-acetyl-gamma 94.1 0.1 3.5E-06 47.7 7.3 93 57-164 15-113 (359)
327 1uuf_A YAHK, zinc-type alcohol 94.1 0.22 7.6E-06 45.1 9.5 39 49-88 187-225 (369)
328 4eso_A Putative oxidoreductase 94.1 0.059 2E-06 46.2 5.3 46 55-111 5-51 (255)
329 1yde_A Retinal dehydrogenase/r 94.1 0.11 3.7E-06 44.9 7.0 35 54-89 5-40 (270)
330 1lnq_A MTHK channels, potassiu 94.1 0.054 1.8E-06 48.4 5.1 104 58-182 115-226 (336)
331 2yv2_A Succinyl-COA synthetase 94.1 0.14 4.6E-06 45.7 7.7 107 57-184 12-126 (297)
332 4dqx_A Probable oxidoreductase 94.0 0.08 2.8E-06 46.0 6.1 48 53-111 22-70 (277)
333 3zv4_A CIS-2,3-dihydrobiphenyl 94.0 0.08 2.7E-06 46.1 6.0 46 55-111 2-48 (281)
334 1y1p_A ARII, aldehyde reductas 94.0 0.23 7.8E-06 43.3 9.0 35 55-89 8-43 (342)
335 4fgs_A Probable dehydrogenase 94.0 0.14 4.6E-06 45.2 7.4 53 49-112 20-73 (273)
336 1hdc_A 3-alpha, 20 beta-hydrox 93.9 0.076 2.6E-06 45.4 5.6 34 55-89 2-36 (254)
337 3pqe_A L-LDH, L-lactate dehydr 93.9 0.15 5.3E-06 46.0 7.9 75 57-144 4-83 (326)
338 2yjz_A Metalloreductase steap4 93.0 0.01 3.5E-07 49.8 0.0 89 56-167 17-108 (201)
339 3rd5_A Mypaa.01249.C; ssgcid, 93.9 0.08 2.7E-06 46.1 5.8 46 55-111 13-59 (291)
340 3grp_A 3-oxoacyl-(acyl carrier 93.9 0.074 2.5E-06 46.0 5.5 46 55-111 24-70 (266)
341 1kol_A Formaldehyde dehydrogen 93.8 0.22 7.5E-06 45.4 8.8 32 57-89 185-217 (398)
342 1wdk_A Fatty oxidation complex 93.8 0.077 2.6E-06 52.9 6.1 32 57-89 313-344 (715)
343 3fbg_A Putative arginate lyase 93.8 0.54 1.8E-05 42.0 11.3 31 57-87 150-181 (346)
344 2dph_A Formaldehyde dismutase; 93.8 0.15 5.1E-06 46.7 7.7 32 57-88 185-217 (398)
345 2ew8_A (S)-1-phenylethanol deh 93.8 0.09 3.1E-06 44.7 5.8 35 54-89 3-38 (249)
346 1e3j_A NADP(H)-dependent ketos 93.7 0.34 1.2E-05 43.3 9.9 39 49-89 161-199 (352)
347 1rjw_A ADH-HT, alcohol dehydro 93.7 0.24 8E-06 44.2 8.7 39 49-89 157-195 (339)
348 3s2e_A Zinc-containing alcohol 93.7 0.16 5.6E-06 45.2 7.7 32 57-88 166-197 (340)
349 3qwb_A Probable quinone oxidor 93.7 0.31 1E-05 43.3 9.4 33 56-88 147-180 (334)
350 3uog_A Alcohol dehydrogenase; 93.7 0.23 7.8E-06 44.8 8.7 32 57-88 189-220 (363)
351 3i83_A 2-dehydropantoate 2-red 93.7 0.44 1.5E-05 42.2 10.4 109 59-182 3-124 (320)
352 4fs3_A Enoyl-[acyl-carrier-pro 93.7 0.1 3.4E-06 44.9 5.9 36 54-90 2-40 (256)
353 1f8f_A Benzyl alcohol dehydrog 93.6 0.14 4.7E-06 46.3 7.0 113 57-185 190-313 (371)
354 4g81_D Putative hexonate dehyd 93.6 0.13 4.5E-06 44.8 6.6 44 55-109 6-50 (255)
355 4fn4_A Short chain dehydrogena 93.6 0.13 4.6E-06 44.7 6.6 45 55-110 4-49 (254)
356 2vt3_A REX, redox-sensing tran 93.6 0.04 1.4E-06 47.0 3.1 37 52-89 80-118 (215)
357 3gvc_A Oxidoreductase, probabl 93.5 0.077 2.6E-06 46.2 5.0 46 55-111 26-72 (277)
358 3tqh_A Quinone oxidoreductase; 93.5 1.8 6.1E-05 38.0 14.0 113 49-184 145-264 (321)
359 3dii_A Short-chain dehydrogena 93.5 0.071 2.4E-06 45.4 4.6 44 57-111 1-45 (247)
360 4eye_A Probable oxidoreductase 93.4 0.2 6.9E-06 44.8 7.7 33 57-89 159-192 (342)
361 2v6b_A L-LDH, L-lactate dehydr 93.4 0.31 1.1E-05 43.2 8.8 73 59-143 1-76 (304)
362 3fpc_A NADP-dependent alcohol 93.3 0.31 1.1E-05 43.6 8.9 39 49-89 159-198 (352)
363 2zb4_A Prostaglandin reductase 93.3 0.26 9E-06 44.1 8.4 32 57-88 158-193 (357)
364 1jvb_A NAD(H)-dependent alcoho 93.3 0.25 8.7E-06 44.1 8.2 32 57-89 170-203 (347)
365 1hyh_A L-hicdh, L-2-hydroxyiso 93.3 0.18 6.1E-06 44.7 7.1 75 59-146 2-81 (309)
366 1v3u_A Leukotriene B4 12- hydr 93.3 0.27 9.2E-06 43.5 8.3 32 57-89 145-177 (333)
367 3tpc_A Short chain alcohol deh 93.3 0.053 1.8E-06 46.3 3.5 35 54-89 3-38 (257)
368 3uko_A Alcohol dehydrogenase c 93.3 0.26 8.8E-06 44.7 8.3 31 57-87 193-224 (378)
369 3zwc_A Peroxisomal bifunctiona 93.2 0.36 1.2E-05 48.4 9.9 30 59-89 317-346 (742)
370 4hp8_A 2-deoxy-D-gluconate 3-d 93.2 0.28 9.5E-06 42.6 7.9 35 55-90 6-41 (247)
371 3tzq_B Short-chain type dehydr 93.1 0.083 2.9E-06 45.6 4.5 35 54-89 7-42 (271)
372 4dyv_A Short-chain dehydrogena 93.1 0.1 3.4E-06 45.4 5.1 46 55-111 25-71 (272)
373 3a06_A 1-deoxy-D-xylulose 5-ph 93.1 0.26 8.8E-06 45.5 7.9 45 59-113 4-51 (376)
374 1pjq_A CYSG, siroheme synthase 93.1 0.095 3.3E-06 49.4 5.2 35 54-89 8-42 (457)
375 4aj2_A L-lactate dehydrogenase 93.1 0.43 1.5E-05 43.2 9.4 77 55-143 16-96 (331)
376 4dup_A Quinone oxidoreductase; 93.1 0.2 6.9E-06 45.0 7.2 32 57-88 167-199 (353)
377 3nrc_A Enoyl-[acyl-carrier-pro 93.1 0.086 2.9E-06 45.7 4.5 34 55-89 23-59 (280)
378 3ego_A Probable 2-dehydropanto 93.0 0.24 8.1E-06 43.9 7.5 98 58-170 2-105 (307)
379 2o23_A HADH2 protein; HSD17B10 93.0 0.089 3.1E-06 44.6 4.5 34 54-87 8-42 (265)
380 2yv1_A Succinyl-COA ligase [AD 93.0 0.17 5.7E-06 45.0 6.4 107 57-184 12-125 (294)
381 3ids_C GAPDH, glyceraldehyde-3 93.0 1.3 4.3E-05 40.7 12.3 98 58-164 2-136 (359)
382 3gaz_A Alcohol dehydrogenase s 92.9 0.7 2.4E-05 41.2 10.6 31 57-87 150-181 (343)
383 3nx4_A Putative oxidoreductase 92.9 0.15 5.2E-06 44.9 6.1 39 50-89 139-179 (324)
384 1a5z_A L-lactate dehydrogenase 92.9 0.19 6.3E-06 45.0 6.7 76 59-146 1-79 (319)
385 3jyn_A Quinone oxidoreductase; 92.9 0.3 1E-05 43.2 7.9 32 57-88 140-172 (325)
386 2j3h_A NADP-dependent oxidored 92.8 0.43 1.5E-05 42.4 8.9 31 57-87 155-186 (345)
387 3o38_A Short chain dehydrogena 92.7 0.2 6.7E-06 42.8 6.2 34 55-89 19-54 (266)
388 2ehd_A Oxidoreductase, oxidore 92.6 0.12 4.1E-06 43.1 4.7 32 57-89 4-36 (234)
389 4hb9_A Similarities with proba 92.6 0.14 4.9E-06 45.6 5.5 31 59-90 2-32 (412)
390 2c0c_A Zinc binding alcohol de 92.5 0.31 1E-05 44.0 7.6 32 57-88 163-195 (362)
391 3p7m_A Malate dehydrogenase; p 92.5 0.49 1.7E-05 42.5 8.8 33 56-89 3-36 (321)
392 3vh1_A Ubiquitin-like modifier 92.4 0.14 4.9E-06 50.0 5.5 36 55-90 324-359 (598)
393 3hn2_A 2-dehydropantoate 2-red 92.4 0.37 1.3E-05 42.6 7.9 93 59-168 3-107 (312)
394 3svt_A Short-chain type dehydr 92.4 0.31 1.1E-05 42.0 7.3 36 53-89 6-42 (281)
395 3ai3_A NADPH-sorbose reductase 92.4 0.36 1.2E-05 41.1 7.6 35 54-89 3-38 (263)
396 3tl2_A Malate dehydrogenase; c 92.4 0.52 1.8E-05 42.2 8.9 33 56-89 6-39 (315)
397 4dvj_A Putative zinc-dependent 92.4 0.94 3.2E-05 40.8 10.7 109 57-184 171-288 (363)
398 1zud_1 Adenylyltransferase THI 92.4 0.086 2.9E-06 45.7 3.5 36 56-91 26-61 (251)
399 3qiv_A Short-chain dehydrogena 92.4 0.35 1.2E-05 40.8 7.4 35 54-89 5-40 (253)
400 1ldn_A L-lactate dehydrogenase 92.4 0.38 1.3E-05 42.9 7.9 75 57-145 5-85 (316)
401 3gpi_A NAD-dependent epimerase 92.3 0.16 5.4E-06 43.7 5.2 33 57-89 2-34 (286)
402 1h2b_A Alcohol dehydrogenase; 92.3 0.44 1.5E-05 42.8 8.3 32 57-88 186-218 (359)
403 1qsg_A Enoyl-[acyl-carrier-pro 92.2 0.18 6.1E-06 43.1 5.3 33 56-89 7-42 (265)
404 3c7a_A Octopine dehydrogenase; 92.2 0.2 6.9E-06 45.8 6.0 30 59-89 3-33 (404)
405 4gx0_A TRKA domain protein; me 92.1 0.17 5.9E-06 48.5 5.7 106 57-182 126-239 (565)
406 3gem_A Short chain dehydrogena 92.1 0.065 2.2E-06 46.2 2.5 35 54-89 23-58 (260)
407 3eag_A UDP-N-acetylmuramate:L- 92.1 0.44 1.5E-05 42.5 8.0 32 58-90 4-36 (326)
408 2hjr_A Malate dehydrogenase; m 92.0 0.34 1.2E-05 43.5 7.2 32 57-89 13-45 (328)
409 1oju_A MDH, malate dehydrogena 92.0 0.56 1.9E-05 41.6 8.5 71 59-144 1-79 (294)
410 1pzg_A LDH, lactate dehydrogen 92.0 0.11 3.9E-06 46.8 4.0 32 57-89 8-40 (331)
411 3m1a_A Putative dehydrogenase; 92.0 0.11 3.7E-06 44.8 3.8 34 55-88 2-36 (281)
412 2i6u_A Otcase, ornithine carba 92.0 0.77 2.6E-05 41.2 9.4 105 21-143 115-226 (307)
413 3gqv_A Enoyl reductase; medium 92.0 0.55 1.9E-05 42.4 8.7 33 56-88 163-196 (371)
414 2z1n_A Dehydrogenase; reductas 92.0 0.43 1.5E-05 40.5 7.6 35 54-89 3-38 (260)
415 1vm6_A DHPR, dihydrodipicolina 92.0 0.84 2.9E-05 39.2 9.2 94 57-188 11-111 (228)
416 3t4x_A Oxidoreductase, short c 92.0 0.33 1.1E-05 41.6 6.8 37 52-89 4-41 (267)
417 1t2d_A LDH-P, L-lactate dehydr 91.9 0.37 1.3E-05 43.2 7.3 30 59-89 5-35 (322)
418 4eez_A Alcohol dehydrogenase 1 91.9 0.62 2.1E-05 41.3 8.8 121 48-185 155-285 (348)
419 3h7a_A Short chain dehydrogena 91.9 0.23 8E-06 42.3 5.7 35 54-89 3-38 (252)
420 2ewd_A Lactate dehydrogenase,; 91.8 0.097 3.3E-06 46.7 3.3 32 58-90 4-36 (317)
421 1ks9_A KPA reductase;, 2-dehyd 91.8 0.21 7.3E-06 42.8 5.5 31 59-90 1-31 (291)
422 3ldh_A Lactate dehydrogenase; 91.8 0.33 1.1E-05 44.0 6.8 32 57-89 20-53 (330)
423 3d0o_A L-LDH 1, L-lactate dehy 91.8 0.54 1.8E-05 42.0 8.2 77 56-145 4-85 (317)
424 3f1l_A Uncharacterized oxidore 91.7 0.44 1.5E-05 40.4 7.2 34 55-89 9-43 (252)
425 2j8z_A Quinone oxidoreductase; 91.7 0.5 1.7E-05 42.4 7.9 31 57-87 162-193 (354)
426 3r3s_A Oxidoreductase; structu 91.6 0.43 1.5E-05 41.7 7.3 34 55-89 46-80 (294)
427 3lf2_A Short chain oxidoreduct 91.6 0.48 1.6E-05 40.5 7.4 35 54-89 4-39 (265)
428 1zem_A Xylitol dehydrogenase; 91.6 0.47 1.6E-05 40.4 7.4 35 54-89 3-38 (262)
429 2pnf_A 3-oxoacyl-[acyl-carrier 91.6 0.4 1.4E-05 40.0 6.8 35 53-87 2-37 (248)
430 3i1j_A Oxidoreductase, short c 91.6 0.39 1.3E-05 40.3 6.7 34 55-89 11-45 (247)
431 1lld_A L-lactate dehydrogenase 91.5 0.7 2.4E-05 40.6 8.6 32 57-89 6-39 (319)
432 3dfu_A Uncharacterized protein 91.5 0.076 2.6E-06 45.9 2.2 33 55-87 3-35 (232)
433 3gms_A Putative NADPH:quinone 91.5 0.2 7E-06 44.6 5.1 32 57-88 144-176 (340)
434 1ys4_A Aspartate-semialdehyde 91.5 0.2 6.8E-06 45.6 5.1 32 58-89 8-41 (354)
435 3jv7_A ADH-A; dehydrogenase, n 91.5 0.78 2.7E-05 40.8 8.9 31 57-87 171-202 (345)
436 3n74_A 3-ketoacyl-(acyl-carrie 91.5 0.51 1.7E-05 40.0 7.4 47 54-111 5-52 (261)
437 3ucx_A Short chain dehydrogena 91.4 0.45 1.5E-05 40.7 7.1 35 54-89 7-42 (264)
438 3nyw_A Putative oxidoreductase 91.4 0.37 1.3E-05 41.0 6.5 35 54-89 3-38 (250)
439 1nff_A Putative oxidoreductase 91.4 0.55 1.9E-05 40.1 7.5 35 54-89 3-38 (260)
440 4ibo_A Gluconate dehydrogenase 91.4 0.38 1.3E-05 41.5 6.6 35 54-89 22-57 (271)
441 3ppi_A 3-hydroxyacyl-COA dehyd 91.3 0.34 1.2E-05 41.7 6.2 46 55-111 27-73 (281)
442 4a7p_A UDP-glucose dehydrogena 91.3 1.1 3.9E-05 42.0 10.3 112 48-183 312-437 (446)
443 2pd6_A Estradiol 17-beta-dehyd 91.3 0.56 1.9E-05 39.6 7.5 35 54-89 3-38 (264)
444 3lyl_A 3-oxoacyl-(acyl-carrier 91.3 0.43 1.5E-05 40.0 6.8 33 55-87 2-35 (247)
445 3imf_A Short chain dehydrogena 91.3 0.39 1.3E-05 40.9 6.5 45 55-110 3-48 (257)
446 3r6d_A NAD-dependent epimerase 91.3 0.35 1.2E-05 39.8 6.1 31 58-88 5-37 (221)
447 3fr7_A Putative ketol-acid red 91.1 0.19 6.6E-06 48.2 4.7 31 55-85 50-87 (525)
448 2wsb_A Galactitol dehydrogenas 91.1 0.57 2E-05 39.2 7.3 34 54-87 7-41 (254)
449 1hdo_A Biliverdin IX beta redu 91.1 0.41 1.4E-05 38.4 6.1 33 57-89 2-35 (206)
450 3f9i_A 3-oxoacyl-[acyl-carrier 91.1 0.44 1.5E-05 40.0 6.6 47 54-111 10-57 (249)
451 3pk0_A Short-chain dehydrogena 91.0 0.43 1.5E-05 40.8 6.6 34 55-89 7-41 (262)
452 3ius_A Uncharacterized conserv 91.0 0.27 9.1E-06 42.0 5.2 33 57-89 4-36 (286)
453 3ged_A Short-chain dehydrogena 91.0 0.49 1.7E-05 40.9 6.9 73 58-143 2-84 (247)
454 3gvi_A Malate dehydrogenase; N 90.9 0.18 6E-06 45.6 4.1 33 56-89 5-38 (324)
455 1tt5_B Ubiquitin-activating en 90.9 0.13 4.4E-06 48.4 3.3 34 57-90 39-72 (434)
456 3rui_A Ubiquitin-like modifier 90.9 0.19 6.6E-06 45.8 4.3 37 55-91 31-67 (340)
457 4hv4_A UDP-N-acetylmuramate--L 90.9 0.9 3.1E-05 43.0 9.2 33 57-90 21-54 (494)
458 4gkb_A 3-oxoacyl-[acyl-carrier 90.9 0.36 1.2E-05 41.9 6.0 37 52-89 1-38 (258)
459 1hxh_A 3BETA/17BETA-hydroxyste 90.9 0.5 1.7E-05 40.0 6.8 34 55-89 3-37 (253)
460 3ak4_A NADH-dependent quinucli 90.9 0.59 2E-05 39.7 7.3 34 55-89 9-43 (263)
461 3rkr_A Short chain oxidoreduct 90.9 0.48 1.6E-05 40.4 6.7 34 55-89 26-60 (262)
462 4egf_A L-xylulose reductase; s 90.9 0.46 1.6E-05 40.7 6.6 34 55-89 17-51 (266)
463 3op4_A 3-oxoacyl-[acyl-carrier 90.9 0.51 1.7E-05 40.0 6.8 34 55-89 6-40 (248)
464 1ur5_A Malate dehydrogenase; o 90.9 0.62 2.1E-05 41.4 7.6 30 59-89 3-33 (309)
465 4gx0_A TRKA domain protein; me 90.8 0.21 7.1E-06 47.9 4.7 108 51-182 341-457 (565)
466 3awd_A GOX2181, putative polyo 90.8 0.62 2.1E-05 39.1 7.3 34 55-89 10-44 (260)
467 2jah_A Clavulanic acid dehydro 90.8 0.61 2.1E-05 39.4 7.3 34 55-89 4-38 (247)
468 4dry_A 3-oxoacyl-[acyl-carrier 90.8 0.37 1.3E-05 41.8 6.0 36 53-89 28-64 (281)
469 2ae2_A Protein (tropinone redu 90.8 0.63 2.1E-05 39.5 7.3 34 55-89 6-40 (260)
470 1iy8_A Levodione reductase; ox 90.7 0.62 2.1E-05 39.7 7.3 34 55-89 10-44 (267)
471 1uls_A Putative 3-oxoacyl-acyl 90.7 0.66 2.3E-05 39.1 7.4 34 55-89 2-36 (245)
472 3tjr_A Short chain dehydrogena 90.7 0.58 2E-05 40.9 7.2 34 55-89 28-62 (301)
473 2b4q_A Rhamnolipids biosynthes 90.7 0.68 2.3E-05 40.0 7.6 34 55-89 26-60 (276)
474 4a2c_A Galactitol-1-phosphate 90.7 1.2 4.1E-05 39.4 9.3 120 56-186 159-286 (346)
475 3tox_A Short chain dehydrogena 90.7 0.5 1.7E-05 41.0 6.7 45 55-110 5-50 (280)
476 1vlv_A Otcase, ornithine carba 90.6 0.78 2.7E-05 41.5 8.0 105 21-143 134-245 (325)
477 1u7z_A Coenzyme A biosynthesis 90.6 0.33 1.1E-05 41.7 5.3 35 55-89 5-56 (226)
478 1pvv_A Otcase, ornithine carba 90.6 0.91 3.1E-05 40.8 8.5 105 21-143 122-232 (315)
479 3nkl_A UDP-D-quinovosamine 4-d 90.6 0.35 1.2E-05 37.1 5.1 33 57-89 3-36 (141)
480 1pqw_A Polyketide synthase; ro 90.6 0.78 2.7E-05 37.1 7.5 31 57-87 38-69 (198)
481 1vl8_A Gluconate 5-dehydrogena 90.6 0.65 2.2E-05 39.8 7.3 35 54-89 17-52 (267)
482 1guz_A Malate dehydrogenase; o 90.6 0.64 2.2E-05 41.2 7.4 30 59-89 1-32 (310)
483 1y6j_A L-lactate dehydrogenase 90.6 0.77 2.6E-05 41.0 8.0 32 57-89 6-39 (318)
484 4iin_A 3-ketoacyl-acyl carrier 90.6 0.65 2.2E-05 39.7 7.3 54 36-89 6-61 (271)
485 3cmm_A Ubiquitin-activating en 90.5 0.36 1.2E-05 50.0 6.4 37 55-91 24-60 (1015)
486 1yb1_A 17-beta-hydroxysteroid 90.5 0.71 2.4E-05 39.5 7.4 35 54-89 27-62 (272)
487 3fi9_A Malate dehydrogenase; s 90.4 0.49 1.7E-05 43.0 6.6 73 56-143 6-85 (343)
488 2x5o_A UDP-N-acetylmuramoylala 90.4 0.16 5.6E-06 47.3 3.5 36 55-91 2-37 (439)
489 3gaf_A 7-alpha-hydroxysteroid 90.4 0.48 1.7E-05 40.3 6.2 35 54-89 8-43 (256)
490 4fc7_A Peroxisomal 2,4-dienoyl 90.4 0.6 2.1E-05 40.2 6.9 34 55-89 24-58 (277)
491 3oig_A Enoyl-[acyl-carrier-pro 90.3 0.39 1.3E-05 40.9 5.6 35 54-89 3-40 (266)
492 3l6e_A Oxidoreductase, short-c 90.3 0.65 2.2E-05 39.0 6.9 32 57-89 2-34 (235)
493 2h6e_A ADH-4, D-arabinose 1-de 90.2 1.1 3.7E-05 39.9 8.6 31 57-87 170-202 (344)
494 3ioy_A Short-chain dehydrogena 90.2 0.61 2.1E-05 41.3 7.0 34 55-89 5-39 (319)
495 2zat_A Dehydrogenase/reductase 90.2 0.6 2.1E-05 39.6 6.7 34 55-89 11-45 (260)
496 3ftp_A 3-oxoacyl-[acyl-carrier 90.2 0.61 2.1E-05 40.2 6.8 36 53-89 23-59 (270)
497 2a4k_A 3-oxoacyl-[acyl carrier 90.2 0.73 2.5E-05 39.5 7.2 46 55-111 3-49 (263)
498 1duv_G Octase-1, ornithine tra 90.1 0.41 1.4E-05 43.4 5.8 106 21-143 120-233 (333)
499 4h15_A Short chain alcohol deh 90.1 0.37 1.3E-05 41.9 5.3 35 55-90 8-43 (261)
500 2qq5_A DHRS1, dehydrogenase/re 90.1 0.62 2.1E-05 39.5 6.7 34 55-89 2-36 (260)
No 1
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=5.2e-75 Score=548.02 Aligned_cols=260 Identities=42% Similarity=0.778 Sum_probs=254.6
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++|+++++++||||+.+|||.+|.++|||||+++++++++++|.+++++||+||||||||+++|++|.+.
T Consensus 164 m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~ 243 (424)
T 3k92_A 164 MAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA 243 (424)
T ss_dssp HHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC
Confidence 79999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCceEE
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKII 160 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~kiI 160 (262)
|++||+|+|++|++|||+|||+++|++++++++++.+|| ++.++ ++++|+.+||||+|||++++||++|+++++||+|
T Consensus 244 GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~-a~~~~-~~~i~~~~~DIliPcA~~n~I~~~~a~~l~ak~V 321 (424)
T 3k92_A 244 GAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLF-TDVIT-NEELLEKDCDILVPAAISNQITAKNAHNIQASIV 321 (424)
T ss_dssp TCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGC-SCCBC-HHHHHHSCCSEEEECSCSSCBCTTTGGGCCCSEE
T ss_pred CCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCC-cEEec-CccceeccccEEeecCcccccChhhHhhcCceEE
Confidence 999999999999999999999999999999999999997 67776 7889999999999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy14499 161 LEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240 (262)
Q Consensus 161 ve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~~ 240 (262)
+||||+|+||+|+++|++|||+|+||+++|+|||++||+||+||+++++|++++|.++|+++|.++++++++.|++++++
T Consensus 322 ~EgAN~p~t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~v~~~a~~~~~~ 401 (424)
T 3k92_A 322 VERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVD 401 (424)
T ss_dssp ECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EcCCCCCCCHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC
Q psy14499 241 LRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 241 ~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+|+|||++|++||+++|+.|||
T Consensus 402 ~~~aA~~~a~~rva~a~~~~G~ 423 (424)
T 3k92_A 402 MRLAAYMTGIRKSAEASRFRGW 423 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999996
No 2
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=9.1e-73 Score=535.33 Aligned_cols=261 Identities=51% Similarity=0.925 Sum_probs=255.8
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++|+++++++||||+.+|||.+|.++|||||+++++++++++|.+++++||+||||||||++++++|.++
T Consensus 178 m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~ 257 (440)
T 3aog_A 178 MAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH 257 (440)
T ss_dssp HHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC
Confidence 79999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCceEE
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKII 160 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~kiI 160 (262)
|++||+|+|++|++|||+|||+++|++++++++++.+|++++.++ ++++|+.+||||+|||++|.||++||++++||+|
T Consensus 258 GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~-~~ei~~~~~DIlvPcA~~n~i~~~na~~l~ak~V 336 (440)
T 3aog_A 258 GARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLP-AADFWGLPVEFLVPAALEKQITEQNAWRIRARIV 336 (440)
T ss_dssp TCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECC-HHHHTTCCCSEEEECSSSSCBCTTTGGGCCCSEE
T ss_pred CCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcC-chhhhcCCCcEEEecCCcCccchhhHHHcCCcEE
Confidence 999999999999999999999999999999999999999888776 7789999999999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy14499 161 LEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240 (262)
Q Consensus 161 ve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~~ 240 (262)
+||||+|+||+|+++|++|||+|+||+++|+|||++||+||+||.+++.|++|+|.++|+++|.++++++++.|++++++
T Consensus 337 vEgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~ 416 (440)
T 3aog_A 337 AEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQEKKIP 416 (440)
T ss_dssp ECCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC
Q psy14499 241 LRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 241 ~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+|+|||++|++||+++|..|||
T Consensus 417 ~~~aA~~~a~~rva~a~~~~G~ 438 (440)
T 3aog_A 417 LRTAAYVVAATRVLEARALRGL 438 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999996
No 3
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-72 Score=528.28 Aligned_cols=257 Identities=31% Similarity=0.591 Sum_probs=250.4
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++|+++++++||||..+|||.+|.++|||||+++++++++++|.+++++||+||||||||++++++|.+.
T Consensus 161 m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~ 240 (419)
T 3aoe_E 161 MAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL 240 (419)
T ss_dssp HHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCceEE
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKII 160 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~kiI 160 (262)
|++||+|+|++|++|||+|||++++.+++++++++.+| .++ ++++++.+||||+||+++|.||++++++++||+|
T Consensus 241 GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~----~~~-~~e~~~~~~DVliP~A~~n~i~~~~A~~l~ak~V 315 (419)
T 3aoe_E 241 GMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL----DLA-PEEVFGLEAEVLVLAAREGALDGDRARQVQAQAV 315 (419)
T ss_dssp TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC----CBC-TTTGGGSSCSEEEECSCTTCBCHHHHTTCCCSEE
T ss_pred CCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee----ecc-chhhhccCceEEEecccccccccchHhhCCceEE
Confidence 99999999999999999999999999999998888877 345 6788999999999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy14499 161 LEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKVS 240 (262)
Q Consensus 161 ve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~~ 240 (262)
+||||+|+||+|+++|++|||+|+||+++|+|||++||+||+||++++.|++|+|.++|+++|.++++++++.|++++++
T Consensus 316 ~EgAN~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~~ 395 (419)
T 3aoe_E 316 VEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAERGGLD 395 (419)
T ss_dssp EECSTTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC
Q psy14499 241 LRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 241 ~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+|+|||++|++||+++|..||+
T Consensus 396 ~~~aA~~~a~~rv~~a~~~~G~ 417 (419)
T 3aoe_E 396 LRMGALALALERLDEATRLRGV 417 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999996
No 4
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=9.6e-72 Score=526.05 Aligned_cols=261 Identities=42% Similarity=0.780 Sum_probs=254.3
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH-
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK- 79 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~- 79 (262)
|+||+|+|++++|+++++++||||..+|||.+|.++|||||+++++++++++|.+++++||+||||||||++++++|.+
T Consensus 152 m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~ 231 (415)
T 2tmg_A 152 IAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE 231 (415)
T ss_dssp HHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCceE
Q psy14499 80 AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKI 159 (262)
Q Consensus 80 ~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~ki 159 (262)
+|++||+|+|++|++|||+|||++++.+++++++++.+|++++.++ ++++|+.+||||+|||+++.||++|+++++||+
T Consensus 232 ~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~-~~eil~~~~DIliP~A~~n~i~~~~a~~l~ak~ 310 (415)
T 2tmg_A 232 LGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERIT-NEELLELDVDILVPAALEGAIHAGNAERIKAKA 310 (415)
T ss_dssp TCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEEC-HHHHTTCSCSEEEECSSTTSBCHHHHTTCCCSE
T ss_pred cCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcC-chhhhcCCCcEEEecCCcCccCcccHHHcCCeE
Confidence 9999999999999999999999999999999999999999888886 778999999999999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14499 160 ILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTKKV 239 (262)
Q Consensus 160 Ive~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~ 239 (262)
|+||||+|+||+|+++|++|||.|+||+++|+|||++||+||+||.++.+|++++|.++|+++|.++++++++.|+++++
T Consensus 311 V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~~v~~~A~~~g~ 390 (415)
T 2tmg_A 311 VVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNV 390 (415)
T ss_dssp EECCSSSCBCHHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCcccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 240 SLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 240 ~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
++|+|||++|++||+++|..||+
T Consensus 391 ~~~~aA~~~a~~rv~~a~~~~G~ 413 (415)
T 2tmg_A 391 DMRTAAYILAIDRVAYATKKRGI 413 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999996
No 5
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=1.6e-72 Score=531.86 Aligned_cols=261 Identities=39% Similarity=0.672 Sum_probs=253.7
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++|+++++++||||..+|||.+|.++|||||+++++++++++|.++++++|+||||||||++++++|.++
T Consensus 153 m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~ 232 (421)
T 1v9l_A 153 MAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKM 232 (421)
T ss_dssp HHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHC
Confidence 79999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCc---eec-CCCccccccCceEEeeCCccCcccccchhc
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEG---EKI-NDSKEFWSIPCDILIPAAIEDQITINNANN 154 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~---~~~-~~~~~il~~~~DIlipaa~~~~it~e~a~~ 154 (262)
|+|||+|+|++|++|||+|||++++.++++++++ +.+|+++ +.+ + ++++|+.+||||+||+.++.||.+|+++
T Consensus 233 GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~-~~~~~~~~~Dil~P~A~~~~I~~~~a~~ 311 (421)
T 1v9l_A 233 GAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKN-PDAIFKLDVDIFVPAAIENVIRGDNAGL 311 (421)
T ss_dssp TCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSS-TTGGGGCCCSEEEECSCSSCBCTTTTTT
T ss_pred CCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCC-chhhhcCCccEEEecCcCCccchhhHHH
Confidence 9999999999999999999999999999988888 8888765 667 6 7889999999999999999999999999
Q ss_pred cCceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy14499 155 VTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELA 234 (262)
Q Consensus 155 ~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a 234 (262)
++||+|+||||+|+||+|+++|++|||+|+||+++|+|||++||+||+||++++.|++++|.++|+++|.++++++++.|
T Consensus 312 l~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~~im~~~~~~v~~~a 391 (421)
T 1v9l_A 312 VKARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIMVNNVERVYKRW 391 (421)
T ss_dssp CCCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEecCCCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hcCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 235 N-TKKVSLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 235 ~-~~~~~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+ ++++++|+|||++|++||+++|..||+
T Consensus 392 ~~~~~~~~~~aA~~~a~~rv~~a~~~~G~ 420 (421)
T 1v9l_A 392 QREKGWTMRDAAIVTALERIYNAMKIRGW 420 (421)
T ss_dssp TTSSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9 999999999999999999999999996
No 6
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=4.5e-72 Score=530.22 Aligned_cols=260 Identities=32% Similarity=0.517 Sum_probs=247.4
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|+++.+. .++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|++.
T Consensus 183 m~w~~~~y~~~~~~-~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~ 261 (456)
T 3r3j_A 183 IGYLFGQYKKLKNS-FEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK 261 (456)
T ss_dssp HHHHHHHHHHHHTS-CCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCc-ccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC
Confidence 89999999999854 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHH---HHh-cCCccCC----CCceecCCCccccccCceEEeeCCccCcccccch
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKY---VTF-TRSIKDF----NEGEKINDSKEFWSIPCDILIPAAIEDQITINNA 152 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~---~~~-~g~~~~~----~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a 152 (262)
|++||+|+|++|+||||+|||+++|.++ +++ .+++.+| |+++.++ ++++|+.+||||+|||.+++||.+|+
T Consensus 262 GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~-~~~i~~~~~DI~iPcA~~~~I~~~na 340 (456)
T 3r3j_A 262 GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFE-NQKPWNIPCDIAFPCATQNEINENDA 340 (456)
T ss_dssp TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEEC-SCCGGGSCCSEEEECSCTTCBCHHHH
T ss_pred CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeC-CccccccCccEEEeCCCccchhhHHH
Confidence 9999999999999999999999998765 444 3456655 7888887 78899999999999999999999999
Q ss_pred hcc---CceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy14499 153 NNV---TAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDA 229 (262)
Q Consensus 153 ~~~---~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~ 229 (262)
+++ +||+|+||||+|+||||+++|++|||+|+||+++|+|||++||+||+||.++++|++|+|.++|+++|.+++++
T Consensus 341 ~~l~~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~L~~im~~~~~~ 420 (456)
T 3r3j_A 341 DLFIQNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMKLQNIMKSIYEQ 420 (456)
T ss_dssp HHHHHHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 230 IWELANTKKV--SLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 230 v~~~a~~~~~--~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+++.|+++++ ++|+|||+.|++||++||+.||+
T Consensus 421 ~~~~a~~~~~~~~~r~aA~i~~~~rva~a~~~~G~ 455 (456)
T 3r3j_A 421 CHNTSKIYLNESDLVAGANIAGFLKVADSFLEQGG 455 (456)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCHHHhccHHHHHHHHHHHHhcCC
Confidence 9999999988 99999999999999999999996
No 7
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=5.1e-72 Score=529.10 Aligned_cols=261 Identities=38% Similarity=0.689 Sum_probs=236.5
Q ss_pred CchhhhHhhhhcCCc-CCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH
Q psy14499 1 MSWMMDTYSTKKNYT-IPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK 79 (262)
Q Consensus 1 m~w~~d~y~~~~g~~-~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~ 79 (262)
|+||+|+|++++|++ +++++||||+.+|||.+|.++|||||+++++++++++|.+++++||+||||||||++++++|.+
T Consensus 154 m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~ 233 (421)
T 2yfq_A 154 MSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER 233 (421)
T ss_dssp HHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH
Confidence 799999999999987 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCC-----ceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhc
Q psy14499 80 AGAKIVAIQDDK-----TTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANN 154 (262)
Q Consensus 80 ~g~~vv~V~D~~-----G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~ 154 (262)
+|++||+|+|++ |++|||+|||+++|.+++++++++.+|++++.++ ++++|+.+||||+|||++|.||++|+++
T Consensus 234 ~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~-~~~~~~~~~DIliP~A~~n~i~~~~A~~ 312 (421)
T 2yfq_A 234 QGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERIT-DEEFWTKEYDIIVPAALENVITGERAKT 312 (421)
T ss_dssp TTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------------CEEECSCSSCSCHHHHTT
T ss_pred CCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeC-ccchhcCCccEEEEcCCcCcCCcccHHH
Confidence 999999999999 9999999999999999999999999998888787 7789999999999999999999999999
Q ss_pred cCceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy14499 155 VTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELA 234 (262)
Q Consensus 155 ~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a 234 (262)
++||+|+||||+|+||+|+++|++|||.|+||+++|+|||++||+||+||.++.+|++|+|.++|+++|..+++++++.|
T Consensus 313 l~ak~VvEgAN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~~~~~~v~~~A 392 (421)
T 2yfq_A 313 INAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVA 392 (421)
T ss_dssp CCCSEEECCSSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEeCCccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 235 NTKKVSLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 235 ~~~~~~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+++++++|+|||++|++||+++|..|||
T Consensus 393 ~~~g~~~~~aA~~~a~~rv~~a~~~~G~ 420 (421)
T 2yfq_A 393 DEYNVTLREAVYMYAIKSIDVAMKLRGW 420 (421)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999996
No 8
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=4.1e-71 Score=527.68 Aligned_cols=260 Identities=38% Similarity=0.605 Sum_probs=246.0
Q ss_pred CchhhhHhhhhcCCc---CCceEecccCCCCccCCCCChhHHHHHHHHHHHH------HHhCC--CCCCCeEEEEcCCHH
Q psy14499 1 MSWMMDTYSTKKNYT---IPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIA------SKINL--NIINSKISIQGFGNV 69 (262)
Q Consensus 1 m~w~~d~y~~~~g~~---~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~------~~~g~--~l~~~~v~IqGfG~V 69 (262)
|+||+|+|++++|.+ .++++||||+.+|||++|.++|||||++++++++ +.+|. +++|+||+|||||||
T Consensus 176 M~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNV 255 (501)
T 3mw9_A 176 MSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNV 255 (501)
T ss_dssp HHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHH
T ss_pred HHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHH
Confidence 899999999999975 4799999999999999999999999999999754 46786 589999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccc
Q psy14499 70 GSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITI 149 (262)
Q Consensus 70 G~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~ 149 (262)
|+++|++|.+.|++||+|+|++|+||||+|||+++|.+++++++++.+||+++.++ +++|+.+||||+|||.+++||.
T Consensus 256 G~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~--~~il~~~~DIliPcA~~n~I~~ 333 (501)
T 3mw9_A 256 GLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE--GSILEVDCDILIPAASEKQLTK 333 (501)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC--SCGGGSCCSEEEECSSSCCBCT
T ss_pred HHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec--cccccccceEEeeccccCccCH
Confidence 99999999999999999999999999999999999999999999999999988876 3799999999999999999999
Q ss_pred cchhccCceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCC--------------CCHHHH
Q psy14499 150 NNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLL--------------WTEQEI 215 (262)
Q Consensus 150 e~a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~--------------~~~~~v 215 (262)
+|+++++||+|+||||+|+||+|+++|++|||+|+||+++|+|||++|||||+||++++. |+.++|
T Consensus 334 ~na~~l~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~~~grl~~~~e~~~~~w~~~~v 413 (501)
T 3mw9_A 334 SNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSV 413 (501)
T ss_dssp TTGGGCCCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred hHHHHcCceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccccccccchhhhcccccccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999985 888888
Q ss_pred HHHHHHH------------------------------------HHHHHHHHHHHHhhcC--CCHHHHHHHHHHHHHHHHH
Q psy14499 216 NLRLNNI------------------------------------ICNAFDAIWELANTKK--VSLRTAAFIIGCTRVLQAH 257 (262)
Q Consensus 216 ~~~l~~~------------------------------------~~~~~~~v~~~a~~~~--~~~r~aa~~~a~~rv~~a~ 257 (262)
.++|+++ |.++++++++.|++++ +++|+|||++|++||+++|
T Consensus 414 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~ga~e~d~v~sgL~~~m~~a~~~v~~~a~~~~~~~~lRtAAy~~ai~rv~~a~ 493 (501)
T 3mw9_A 414 QESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVY 493 (501)
T ss_dssp HHHHHHHSCTTTCCCCCCCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccccccccCchHHHHHHHcCCcHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 7777665 9999999999999988 6999999999999999999
Q ss_pred HHcCC
Q psy14499 258 KTRGL 262 (262)
Q Consensus 258 ~~rg~ 262 (262)
+.||+
T Consensus 494 ~~~G~ 498 (501)
T 3mw9_A 494 NEAGV 498 (501)
T ss_dssp HHTTS
T ss_pred HHcCc
Confidence 99996
No 9
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=5e-71 Score=525.25 Aligned_cols=260 Identities=27% Similarity=0.454 Sum_probs=247.0
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++++.. +++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|.+.
T Consensus 196 m~~~~~~y~~~~~~~~-gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~ 274 (470)
T 2bma_A 196 IGYLYGQYKKIVNSFN-GTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL 274 (470)
T ss_dssp HHHHHHHHHHHHCCCS-CSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCcc-cEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC
Confidence 8999999999998764 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCC---CHHHHHHHHHhc-CCccCCC----CceecCCCccccccCceEEeeCCccCcccccch
Q psy14499 81 GAKIVAIQDDKTTIYNPNGF---NIPKLQKYVTFT-RSIKDFN----EGEKINDSKEFWSIPCDILIPAAIEDQITINNA 152 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~Gl---D~~~l~~~~~~~-g~~~~~~----~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a 152 (262)
|++||+|+|++|+||||+|| |++.|+++++++ +++.+|+ +++.++ ++++|+.+||||+|||.++.||.+|+
T Consensus 275 GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~-~~~~~~~~~DI~iPcA~~~~I~~~na 353 (470)
T 2bma_A 275 NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFP-NEKPWGVPCTLAFPCATQNDVDLDQA 353 (470)
T ss_dssp TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECS-SCCTTSSCCSEEEECSSTTCBCSHHH
T ss_pred CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEec-CcCeeecCccEEEeccccCcCCHHHH
Confidence 99999999999999999999 555666667664 6888874 567776 67889999999999999999999999
Q ss_pred hcc---CceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q psy14499 153 NNV---TAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDA 229 (262)
Q Consensus 153 ~~~---~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~ 229 (262)
+++ +||+|+||||+|+||+|+++|++|||+|+||+++|+|||++||+||+||++++.|++++|.++|+++|.+++++
T Consensus 354 ~~l~~~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~L~~im~~~~~~ 433 (470)
T 2bma_A 354 KLLQKNGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEKLKEIMRNIFIA 433 (470)
T ss_dssp HHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC---CHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 230 IWELANTKKV---SLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 230 v~~~a~~~~~---~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+++.|+++++ ++|+|||+.|++||++||..|||
T Consensus 434 ~~~~a~~~~~~~~~~r~~A~i~~~~rva~am~~~G~ 469 (470)
T 2bma_A 434 CSENALKYTKNKYDLQAGANIAGFLKVAESYIEQGC 469 (470)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999998 99999999999999999999996
No 10
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=6.6e-69 Score=508.85 Aligned_cols=260 Identities=28% Similarity=0.492 Sum_probs=243.9
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|+++++. .++++||||+.+|||.+|.++|||||+++++++++++|.+++|+||+||||||||+++|++|.+.
T Consensus 179 m~~~~~~y~~~~~~-~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~ 257 (450)
T 4fcc_A 179 VGFMAGMMKKLSNN-TACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF 257 (450)
T ss_dssp HHHHHHHHHHHHTC-CSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhccCC-CceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc
Confidence 78999999999764 58899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCCCHHHHHHHHHh----cCCccCCC---CceecCCCccccccCceEEeeCCccCcccccchh
Q psy14499 81 GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF----TRSIKDFN---EGEKINDSKEFWSIPCDILIPAAIEDQITINNAN 153 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~----~g~~~~~~---~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~ 153 (262)
|++||+++|++|+||||+|||+++|.++++. .+++.+|+ +++.++ ++++|+.+||||+|||.+++||.++++
T Consensus 258 GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~-~~~i~~~~~DI~iPcAl~~~I~~~~a~ 336 (450)
T 4fcc_A 258 GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE-GQQPWSVPVDIALPCATQNELDVDAAH 336 (450)
T ss_dssp TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE-TCCGGGSCCSEEEECSCTTCBCHHHHH
T ss_pred CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec-CcccccCCccEEeeccccccccHHHHH
Confidence 9999999999999999999999999888763 34444443 566677 889999999999999999999999999
Q ss_pred ccC---ceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q psy14499 154 NVT---AKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAI 230 (262)
Q Consensus 154 ~~~---~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v 230 (262)
+++ ||+|+||||+|+||||+++|++|||+|+||+++|+|||++||+||+||.+++.|++|+|.++|+++|.++++++
T Consensus 337 ~L~a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL~~im~~~~~~~ 416 (450)
T 4fcc_A 337 QLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHAC 416 (450)
T ss_dssp HHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 996 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 231 WELANT-KKVSLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 231 ~~~a~~-~~~~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
++.+++ +..++|.|||++|++||++||..|||
T Consensus 417 ~~~~~e~~~~~~~~aA~i~a~~rVa~Am~~~G~ 449 (450)
T 4fcc_A 417 VEHGGEGEQTNYVQGANIAGFVKVADAMLAQGV 449 (450)
T ss_dssp HHTSCSSSSCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 998866 56899999999999999999999996
No 11
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=1.7e-68 Score=507.12 Aligned_cols=261 Identities=29% Similarity=0.479 Sum_probs=250.2
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKA 80 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~ 80 (262)
|+||+|+|++++++++++++||||..+|||.+|.++|||||+++++++++++|.+++++||+||||||||+.++++|.+.
T Consensus 173 m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~ 252 (449)
T 1bgv_A 173 IGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL 252 (449)
T ss_dssp HHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC
Confidence 89999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCceeeCCCCC----CHHHHHHHHHhc-CCccCCCC---ceecCCCccccccCceEEeeCCccCcccccch
Q psy14499 81 GAKIVAIQDDKTTIYNPNGF----NIPKLQKYVTFT-RSIKDFNE---GEKINDSKEFWSIPCDILIPAAIEDQITINNA 152 (262)
Q Consensus 81 g~~vv~V~D~~G~i~~~~Gl----D~~~l~~~~~~~-g~~~~~~~---~~~~~~~~~il~~~~DIlipaa~~~~it~e~a 152 (262)
|++||+|+|++|++|||+|| |+++|.++++++ +++.+|++ ++.++ ++++|+.+||||+||+.++.||.+|+
T Consensus 253 GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~-~~e~~~~~~Dil~P~A~~~~I~~~na 331 (449)
T 1bgv_A 253 GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFP-GEKPWGQKVDIIMPCATQNDVDLEQA 331 (449)
T ss_dssp TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEE-TCCGGGSCCSEEECCSCTTCBCHHHH
T ss_pred CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeC-chhhhcCCcceeeccccccccchhhH
Confidence 99999999999999999999 667888888876 68888864 67776 67889999999999999999999999
Q ss_pred hccCc---eEEEecCCCCCCHHHHHHHHHC-CCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Q psy14499 153 NNVTA---KIILEGANGPTTTEADDILRDK-GIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFD 228 (262)
Q Consensus 153 ~~~~~---kiIve~AN~p~t~ea~~~l~~r-gi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~ 228 (262)
++++| |+|+||||+|+||+|+++|++| ||+|+||+++|+|||++||+||+||.++..|++++|.++|+++|.++++
T Consensus 332 ~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~L~~~m~~~~~ 411 (449)
T 1bgv_A 332 KKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDSKLHQVMTDIHD 411 (449)
T ss_dssp HHHHHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhcccccccccHHHHHHHHHHHHHHHHH
Confidence 99986 9999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 229 AIWELANTKKV--SLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 229 ~v~~~a~~~~~--~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
++++.|+++++ ++|.+||+.|++||+++|..||+
T Consensus 412 ~v~~~a~~~~~~~~~~~~A~i~~~~rv~~a~~~~G~ 447 (449)
T 1bgv_A 412 GSAAAAERYGLGYNLVAGANIVGFQKIADAMMAQGI 447 (449)
T ss_dssp HHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCCHHHHhhHHHHHHHHHHHHhcCc
Confidence 99999999999 89999999999999999999996
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=1.9e-58 Score=437.14 Aligned_cols=261 Identities=44% Similarity=0.752 Sum_probs=251.0
Q ss_pred CchhhhHhhhhcCCcCC--ceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCC-CCCCeEEEEcCCHHHHHHHHHH
Q psy14499 1 MSWMMDTYSTKKNYTIP--GIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINLN-IINSKISIQGFGNVGSVAANLF 77 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~--~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~-l~~~~v~IqGfG~VG~~~a~~L 77 (262)
|+||+|+|++++|++++ +++||||..+|||.+|.++|||||+++++++++++|.+ ++++||.|||||+||+.+|++|
T Consensus 152 m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l 231 (419)
T 1gtm_A 152 MAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIM 231 (419)
T ss_dssp HHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHH
Confidence 79999999999998777 99999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccC
Q psy14499 78 FK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVT 156 (262)
Q Consensus 78 ~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~ 156 (262)
.+ +|++|++++|+.|.+|+++|+|+++|+++++..+++..||..+.++ .++++..+|||||||+.++++|+++++.++
T Consensus 232 ~~~~G~kVv~~sD~~g~~~~~~gvdl~~L~~~~d~~~~l~~l~~t~~i~-~~~l~~mk~dilIn~ArG~~Vde~a~~aL~ 310 (419)
T 1gtm_A 232 SEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNIT-NEELLELEVDVLAPAAIEEVITKKNADNIK 310 (419)
T ss_dssp HHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEEC-HHHHHHSCCSEEEECSCSCCBCTTGGGGCC
T ss_pred HHhcCCEEEEEeCCCccccCccCCCHHHHHHHHHhcCEeecCccCeeeC-HHHHHhCCCCEEEECCCcccCCHHHHHHhc
Confidence 99 9999999999999999999999999999988778888887766675 667888899999999999999999999999
Q ss_pred ceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14499 157 AKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANT 236 (262)
Q Consensus 157 ~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~ 236 (262)
++.|+|+||.|++|++.++|..+||.+.||+++|+|||++||+||+||+++.+|+.+++.++++++|.+++.++++.|++
T Consensus 311 ~~~I~~aAneP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~~a~~ 390 (419)
T 1gtm_A 311 AKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKE 390 (419)
T ss_dssp CSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeeCCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 237 KKVSLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 237 ~~~~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
+++++|+|||++|++||+++|..||+
T Consensus 391 ~~~~~~~aA~~~a~~rv~~a~~~~g~ 416 (419)
T 1gtm_A 391 KNIHMRDAAYVVAVQRVYQAMLDRGW 416 (419)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HCcCHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999996
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=1.5e-52 Score=388.86 Aligned_cols=224 Identities=27% Similarity=0.410 Sum_probs=204.1
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHhCC-CCCCCeEEEEcCCHHHHHHHHHHHH
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKINL-NIINSKISIQGFGNVGSVAANLFFK 79 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~-~l~~~~v~IqGfG~VG~~~a~~L~~ 79 (262)
|+||+|+|+ ++||||..+|||.+|.++|||||+++++++++++|. +++|++|+|||||+||+.+|++|.+
T Consensus 126 m~~~~~~~~---------~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~ 196 (355)
T 1c1d_A 126 MDTLNDTTE---------FVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAE 196 (355)
T ss_dssp HHHHHHHCS---------CBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHhcC---------eeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHH
Confidence 799999986 489999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCceE
Q psy14499 80 AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAKI 159 (262)
Q Consensus 80 ~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~ki 159 (262)
+|++|+ ++| .|+++ .++.++. +++.++ .+++|..+||||+||+.++.||.++++.++|++
T Consensus 197 ~GakVv-vsD----------~~~~~-~~~a~~~-------ga~~v~-~~ell~~~~DIliP~A~~~~I~~~~~~~lk~~i 256 (355)
T 1c1d_A 197 AGAQLL-VAD----------TDTER-VAHAVAL-------GHTAVA-LEDVLSTPCDVFAPCAMGGVITTEVARTLDCSV 256 (355)
T ss_dssp TTCEEE-EEC----------SCHHH-HHHHHHT-------TCEECC-GGGGGGCCCSEEEECSCSCCBCHHHHHHCCCSE
T ss_pred CCCEEE-EEe----------CCccH-HHHHHhc-------CCEEeC-hHHhhcCccceecHhHHHhhcCHHHHhhCCCCE
Confidence 999999 999 45554 3444432 345555 678898999999999999999999999999999
Q ss_pred EEecCCCCCCH-HHHHHHHHCCCeEeccccccchhhHHHH-HHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14499 160 ILEGANGPTTT-EADDILRDKGIILAPDVITNAGGVIVSY-FEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK 237 (262)
Q Consensus 160 Ive~AN~p~t~-ea~~~l~~rgi~~iPD~~aN~GGvi~s~-~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~ 237 (262)
|+|+||+|+++ +|.++|+++||.++||+++|+|||++|| +|| +.|++|+|.++++++| +++++|++.|+++
T Consensus 257 Vie~AN~p~t~~eA~~~L~~~gIlv~Pd~~aNaGGV~~s~~~E~------~~w~~e~v~~~l~~i~-~~~~~i~~~~~~~ 329 (355)
T 1c1d_A 257 VAGAANNVIADEAASDILHARGILYAPDFVANAGGAIHLVGREV------LGWSESVVHERAVAIG-DTLNQVFEISDND 329 (355)
T ss_dssp ECCSCTTCBCSHHHHHHHHHTTCEECCHHHHTTHHHHHHHHHHT------TCCCHHHHHHHHHTHH-HHHHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHhCCEEEECCeEEcCCCeeeeeeehh------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 99999999985 9999999999999999999999999999 999 5699999999999998 7799999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHc
Q psy14499 238 KVSLRTAAFIIGCTRVLQAHKTR 260 (262)
Q Consensus 238 ~~~~r~aa~~~a~~rv~~a~~~r 260 (262)
++++|+|||.+|++||.++|..+
T Consensus 330 ~~~~~~aA~~~a~~rv~~a~~~~ 352 (355)
T 1c1d_A 330 GVTPDEAARTLAGRRAREASTTT 352 (355)
T ss_dssp TCCHHHHHHHHHHHHHHHTC---
T ss_pred CcCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999988654
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=7.8e-50 Score=372.22 Aligned_cols=227 Identities=24% Similarity=0.344 Sum_probs=210.4
Q ss_pred CchhhhHhhhhcCCcCCceEecccCCCCccCCCCChhHHHHHHHHHHHHHHh-CC-CCCCCeEEEEcCCHHHHHHHHHHH
Q psy14499 1 MSWMMDTYSTKKNYTIPGIVTGKPISIGGSFGRQKATGRGVFIIGSKIASKI-NL-NIINSKISIQGFGNVGSVAANLFF 78 (262)
Q Consensus 1 m~w~~d~y~~~~g~~~~~~~tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~-g~-~l~~~~v~IqGfG~VG~~~a~~L~ 78 (262)
|+||+|+|+ ++||||+.+||+.+|.++|||||++++++++++. |. +++|++|+|||+|+||+.+|+.|.
T Consensus 123 m~~l~~~~~---------~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~ 193 (364)
T 1leh_A 123 MDLIHQETD---------YVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLN 193 (364)
T ss_dssp HHHHHTTCS---------CBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHhcc---------hhcccccccCCCCCcccchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHH
Confidence 789999985 4899999999999999999999999999999985 87 899999999999999999999999
Q ss_pred HCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccCce
Q psy14499 79 KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVTAK 158 (262)
Q Consensus 79 ~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~~k 158 (262)
++|++|+ ++| +|++++.++.++.+ ++.++ .++++..+|||++||+.+++||.++++.++++
T Consensus 194 ~~GakVv-v~D----------~~~~~l~~~a~~~g-------a~~v~-~~~ll~~~~DIvip~a~~~~I~~~~~~~lg~~ 254 (364)
T 1leh_A 194 TEGAKLV-VTD----------VNKAAVSAAVAEEG-------ADAVA-PNAIYGVTCDIFAPCALGAVLNDFTIPQLKAK 254 (364)
T ss_dssp HTTCEEE-EEC----------SCHHHHHHHHHHHC-------CEECC-GGGTTTCCCSEEEECSCSCCBSTTHHHHCCCS
T ss_pred HCCCEEE-EEc----------CCHHHHHHHHHHcC-------CEEEC-hHHHhccCCcEeeccchHHHhCHHHHHhCCCc
Confidence 9999999 999 68888887776642 34455 66788889999999999999999999999999
Q ss_pred EEEecCCCCCC-HHHHHHHHHCCCeEeccccccchhhHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14499 159 IILEGANGPTT-TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQNLSNLLWTEQEINLRLNNIICNAFDAIWELANTK 237 (262)
Q Consensus 159 iIve~AN~p~t-~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~ 237 (262)
+|+|+||+|++ +++.++|+++||.++||+++|+|||++||+|| +.|++|+|.++++++| +++++|++.|+++
T Consensus 255 iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd~~~NaGGv~~s~~E~------~~~~~e~v~~~l~~i~-~~~~~i~~~~~~~ 327 (364)
T 1leh_A 255 VIAGSADNQLKDPRHGKYLHELGIVYAPDYVINAGGVINVADEL------YGYNRTRAMKRVDGIY-DSIEKIFAISKRD 327 (364)
T ss_dssp EECCSCSCCBSSHHHHHHHHHHTCEECCHHHHTTHHHHHHHHGG------GCCCHHHHHHHHTHHH-HHHHHHHHHHHHT
T ss_pred EEEeCCCCCcccHHHHHHHHhCCCEEecceeecCCceEEEEEee------cCCCHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 99999999997 59999999999999999999999999999999 4699999999999998 7799999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHcCC
Q psy14499 238 KVSLRTAAFIIGCTRVLQAHKTRGL 262 (262)
Q Consensus 238 ~~~~r~aa~~~a~~rv~~a~~~rg~ 262 (262)
++++|+|||.+|++||.++++.||+
T Consensus 328 ~~~~~~aA~~~a~~ri~~a~~~~~~ 352 (364)
T 1leh_A 328 GVPSYVAADRMAEERIAKVAKARSQ 352 (364)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999985
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.80 E-value=2.6e-08 Score=91.06 Aligned_cols=173 Identities=13% Similarity=0.095 Sum_probs=111.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH-------CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK-------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 128 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~-------~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~ 128 (262)
++..+|+|+|+|+||+.+++.|.+ .+.++++|+|++...++++ +|+++..+.+++.+.+..+ .++ ..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~~~~~~~~g~~~~~----~~d-~~ 75 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSIISNKEKTGRISDR----AFS-GP 75 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHHHHHHHHHSCSCSS----BCC-SG
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHHHHHhhhcCCCCcc----cCC-HH
Confidence 356799999999999999999977 3689999999999999998 9998877766655544321 123 45
Q ss_pred ccc-ccCceEEeeCCccCcccccc----hhcc--CceEEEecCCCCCC---HHHHHHHHHCCCeEeccccccchhh---H
Q psy14499 129 EFW-SIPCDILIPAAIEDQITINN----ANNV--TAKIILEGANGPTT---TEADDILRDKGIILAPDVITNAGGV---I 195 (262)
Q Consensus 129 ~il-~~~~DIlipaa~~~~it~e~----a~~~--~~kiIve~AN~p~t---~ea~~~l~~rgi~~iPD~~aN~GGv---i 195 (262)
+++ +.++||+++|++.+ .+.++ +... ..|.|+-+...+++ ++..+.-+++|+.+. |-++.|+- +
T Consensus 76 e~l~~~~iDvVVe~T~~~-~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~--~Ea~vg~giPii 152 (325)
T 3ing_A 76 EDLMGEAADLLVDCTPAS-RDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIR--YEATVAGGVPLF 152 (325)
T ss_dssp GGGTTSCCSEEEECCCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCCH
T ss_pred HHhcCCCCCEEEECCCCc-cccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEE--EEeeecccCHHH
Confidence 555 56899999999876 22222 2222 56677766555654 333444577898776 55655543 4
Q ss_pred HHHHHHHhhhc-----C-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14499 196 VSYFEWVQNLS-----N-LLWTEQEINLRLNNIICNAFDAIWELANTKKV 239 (262)
Q Consensus 196 ~s~~E~~~~~~-----~-~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~ 239 (262)
..-.+++.... + +.-+-.-++.++++ ...+.++++.|++.|.
T Consensus 153 ~~l~~~l~g~~I~~i~Gi~nGT~nyil~~m~~--g~~f~~~l~~Aq~~Gy 200 (325)
T 3ing_A 153 SVLDYSILPSKVKRFRGIVSSTINYVIRNMAN--GRSLRDVVDDAIKKGI 200 (325)
T ss_dssp HHHHHTCTTCCEEEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhCCCeeEEEEEEEeeeeEEeecccC--CCCHHHHHHHHHHcCC
Confidence 44444432100 0 00122234555533 3478899999999886
No 16
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.77 E-value=5.7e-08 Score=90.51 Aligned_cols=127 Identities=17% Similarity=0.134 Sum_probs=96.6
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCC---CCHHHHHHHH
Q psy14499 33 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNG---FNIPKLQKYV 109 (262)
Q Consensus 33 ~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~G---lD~~~l~~~~ 109 (262)
-...|+--+..++.++++..|+++++.||+|+|.|.+|.+++++|...|++-+-++|++|.++.... |+..+ +..
T Consensus 167 DiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k--~~~ 244 (388)
T 1vl6_A 167 DQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYH--LEI 244 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHH--HHH
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHH--HHH
Confidence 3468888899999999998899999999999999999999999999999954449999999997542 65432 322
Q ss_pred HhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccC-ceEEEecCCCCC
Q psy14499 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANGPT 168 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~-~kiIve~AN~p~ 168 (262)
.+... .+.. ..+..+.+ .++||||-++.++++|+|.++++. -.+|++-+| |+
T Consensus 245 A~~~~--~~~~---~~~L~eav-~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt 297 (388)
T 1vl6_A 245 ARITN--PERL---SGDLETAL-EGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PV 297 (388)
T ss_dssp HHTSC--TTCC---CSCHHHHH-TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SS
T ss_pred HHhhh--ccCc---hhhHHHHH-ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CC
Confidence 22111 1101 11123444 368999999999999999999995 339999999 54
No 17
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=98.68 E-value=6e-08 Score=90.56 Aligned_cols=127 Identities=15% Similarity=0.099 Sum_probs=95.7
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCC--CCCHHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPN--GFNIPKLQKYV 109 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~--GlD~~~l~~~~ 109 (262)
+-...|+--+..++.++++..|++++..||+|.|.|.+|.+++++|...|++-|-++|++|.+++.. .|+..+ +..
T Consensus 162 DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k--~~f 239 (398)
T 2a9f_A 162 DDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHH--LDI 239 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC-----CH
T ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHH--HHH
Confidence 4556899999999999999889999999999999999999999999999994444999999998753 455432 211
Q ss_pred HhcCCccCCCCceecCCCccccccCceEEeeCCccCcccccchhccC-ceEEEecCCC
Q psy14499 110 TFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANG 166 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e~a~~~~-~kiIve~AN~ 166 (262)
.+... .+.. ..+ ..+.+ .++||||-++.++++|+|.++++. -.||+.-+|-
T Consensus 240 a~~~~--~~~~--~~~-L~eav-~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNP 291 (398)
T 2a9f_A 240 AKVTN--REFK--SGT-LEDAL-EGADIFIGVSAPGVLKAEWISKMAARPVIFAMANP 291 (398)
T ss_dssp HHHHS--CTTC--CCS-CSHHH-HTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSS
T ss_pred hhccC--cccc--hhh-HHHHh-ccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCC
Confidence 11111 0101 111 34455 368999999999999999999995 4499999995
No 18
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.54 E-value=5.9e-06 Score=72.41 Aligned_cols=136 Identities=11% Similarity=0.019 Sum_probs=90.9
Q ss_pred HHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceec
Q psy14499 45 GSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI 124 (262)
Q Consensus 45 ~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~ 124 (262)
+..++++.+.++++ +++|+|+|.+|+.+++.|.+.|++|+ ++| -+.++..++.++.+. . +
T Consensus 104 ~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~-v~~----------r~~~~~~~l~~~~~~-------~-~ 163 (263)
T 2d5c_A 104 FLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLEVW-VWN----------RTPQRALALAEEFGL-------R-A 163 (263)
T ss_dssp HHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSHHHHHHHHHHHTC-------E-E
T ss_pred HHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHhcc-------c-h
Confidence 34445566788999 99999999999999999999999654 877 456665555544331 1 2
Q ss_pred CCCccccccCceEEeeCCccCccc--ccc--hhcc-CceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHHH
Q psy14499 125 NDSKEFWSIPCDILIPAAIEDQIT--INN--ANNV-TAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSYF 199 (262)
Q Consensus 125 ~~~~~il~~~~DIlipaa~~~~it--~e~--a~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~ 199 (262)
++..++ .++||+|-|++..... ... ...+ ..++|++-+.+|...+..+.++++|+.++|..-.-.+..+.++.
T Consensus 164 ~~~~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~q~~~a~~ 241 (263)
T 2d5c_A 164 VPLEKA--REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFR 241 (263)
T ss_dssp CCGGGG--GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHH
T ss_pred hhHhhc--cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHHHHHHHHH
Confidence 213344 6899999999866321 111 2334 35588898887763245667788999988765444444455555
Q ss_pred HHH
Q psy14499 200 EWV 202 (262)
Q Consensus 200 E~~ 202 (262)
.|.
T Consensus 242 ~w~ 244 (263)
T 2d5c_A 242 LWT 244 (263)
T ss_dssp HHH
T ss_pred HHh
Confidence 564
No 19
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.53 E-value=8.5e-07 Score=84.12 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=78.7
Q ss_pred HHHHHHHHHHH-HHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 39 RGVFIIGSKIA-SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 39 ~Gv~~~~~~~~-~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
||+..++...+ +..+..+.|++|+|+|+|+||+.+|+.|..+|++|+ ++| .|+....+....
T Consensus 227 yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Vi-v~d----------~dp~~a~~A~~~------ 289 (464)
T 3n58_A 227 YGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVK-VTE----------VDPICALQAAMD------ 289 (464)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT------
T ss_pred hcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEe----------CCcchhhHHHhc------
Confidence 44444443333 345889999999999999999999999999999988 777 566554333321
Q ss_pred CCCceecCCCccccccCceEEeeCCc-cCcccccchhccC-ceEEEecCCCCC
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 168 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~-~kiIve~AN~p~ 168 (262)
+.+..+ .++++ ..+||++.|+. .++|+.+....++ .-+|+..+.+..
T Consensus 290 --G~~vv~-LeElL-~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 290 --GFEVVT-LDDAA-STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp --TCEECC-HHHHG-GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred --Cceecc-HHHHH-hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence 223333 55666 48999999986 4688999888885 457778777664
No 20
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.50 E-value=1.2e-06 Score=82.67 Aligned_cols=110 Identities=11% Similarity=0.124 Sum_probs=80.2
Q ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC
Q psy14499 35 KATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS 114 (262)
Q Consensus 35 ~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~ 114 (262)
..|+.+++.++.. ..+..+.|++|+|+|+|++|+.+|+.|..+|++|+ ++| .|+.........
T Consensus 200 yGt~~s~~~gi~r---at~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Vi-v~D----------~dp~ra~~A~~~--- 262 (435)
T 3gvp_A 200 YCCRESILDGLKR---TTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVY-VTE----------IDPICALQACMD--- 262 (435)
T ss_dssp HHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT---
T ss_pred hhhHHHHHHHHHH---hhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEe----------CChhhhHHHHHc---
Confidence 3455555555443 34788999999999999999999999999999987 778 566544433322
Q ss_pred ccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccC-ceEEEecCCCCC
Q psy14499 115 IKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 168 (262)
Q Consensus 115 ~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~-~kiIve~AN~p~ 168 (262)
+.+..+ .++++ ..+||++.|+. .++++.+....++ ..+|+..++++.
T Consensus 263 -----G~~v~~-Leeal-~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 263 -----GFRLVK-LNEVI-RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp -----TCEECC-HHHHT-TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred -----CCEecc-HHHHH-hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 122233 44555 48999999975 5889988888885 558888888875
No 21
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.49 E-value=1.5e-06 Score=82.08 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
|+.+++.++ .+..+..+.|++|+|+|+|++|+.+|+.|..+|++|+ ++| .|+.........
T Consensus 193 t~~slldgi---~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Vi-v~D----------~~p~~a~~A~~~----- 253 (436)
T 3h9u_A 193 CRESLVDGI---KRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVV-VTE----------VDPINALQAAME----- 253 (436)
T ss_dssp HHHHHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-----
T ss_pred chHHHHHHH---HHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EEC----------CChhhhHHHHHh-----
Confidence 444444443 3345889999999999999999999999999999987 777 466554443332
Q ss_pred CCCCceecCCCccccccCceEEeeCCcc-CcccccchhccC-ceEEEecCCCCC--CHHH
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIE-DQITINNANNVT-AKIILEGANGPT--TTEA 172 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~-~~it~e~a~~~~-~kiIve~AN~p~--t~ea 172 (262)
+.+..+ .++++ ..+||++.++.. ++++.+....++ .-+|+..++++. .+++
T Consensus 254 ---G~~~~s-L~eal-~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~ 308 (436)
T 3h9u_A 254 ---GYQVLL-VEDVV-EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAW 308 (436)
T ss_dssp ---TCEECC-HHHHT-TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHH
T ss_pred ---CCeecC-HHHHH-hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHH
Confidence 122233 55666 489999988764 889999888885 558889998874 4443
No 22
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.48 E-value=3.3e-06 Score=75.58 Aligned_cols=117 Identities=21% Similarity=0.267 Sum_probs=82.2
Q ss_pred HHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceec--CCC
Q psy14499 50 SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI--NDS 127 (262)
Q Consensus 50 ~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~--~~~ 127 (262)
+..+.++.+++|.|+|+|++|+.+++.|..+|++|+ +.| -+++++....+ .+ .+.+ ++.
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d----------~~~~~~~~~~~-~g-------~~~~~~~~l 209 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGA----------RSSAHLARITE-MG-------LVPFHTDEL 209 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SSHHHHHHHHH-TT-------CEEEEGGGH
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHH-CC-------CeEEchhhH
Confidence 445778999999999999999999999999999987 666 24444433332 11 1211 113
Q ss_pred ccccccCceEEeeCCccCcccccchhccC-ceEEEecCCCCCCHHHHHHHHHCCCeEe--ccc
Q psy14499 128 KEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA--PDV 187 (262)
Q Consensus 128 ~~il~~~~DIlipaa~~~~it~e~a~~~~-~kiIve~AN~p~t~ea~~~l~~rgi~~i--PD~ 187 (262)
++++ .++|+++.|.+.+.++.+....++ ..+++.-+-+|..-+. +..+++|+.++ |..
T Consensus 210 ~~~l-~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~ 270 (300)
T 2rir_A 210 KEHV-KDIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGL 270 (300)
T ss_dssp HHHS-TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCH
T ss_pred HHHh-hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCC
Confidence 3444 489999999999999887776664 5588888877753223 45577898875 544
No 23
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.47 E-value=8.6e-07 Score=81.02 Aligned_cols=169 Identities=22% Similarity=0.269 Sum_probs=103.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHH---------CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcc
Q psy14499 59 SKISIQGFGNVGSVAANLFFK---------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE 129 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~---------~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 129 (262)
.||+|+|+|+||+.+++.|.+ .+.++++|+|++....++ +|+.+....+...+.+.. .. +.++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~~~~~~~~~~~~~-----~~-d~~~ 74 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEALRMKRETGMLRD-----DA-KAIE 74 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHHHHHHHHHSSCSB-----CC-CHHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHHHhhhccCccccC-----CC-CHHH
Confidence 589999999999999999977 478999999999988887 887765544332222110 01 2455
Q ss_pred cc-ccCceEEeeCCccCcccccchhcc------CceEEEecCCCCCC---HHHHHHHHHCCCeEeccccccchhh---HH
Q psy14499 130 FW-SIPCDILIPAAIEDQITINNANNV------TAKIILEGANGPTT---TEADDILRDKGIILAPDVITNAGGV---IV 196 (262)
Q Consensus 130 il-~~~~DIlipaa~~~~it~e~a~~~------~~kiIve~AN~p~t---~ea~~~l~~rgi~~iPD~~aN~GGv---i~ 196 (262)
++ +.+.|++++|++.+.-+.+ +..+ ..|.|+-....|++ ++..+..+++|+.+. |-++.|+- +.
T Consensus 75 ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~--~ea~v~~g~Pii~ 151 (327)
T 3do5_A 75 VVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLM--YEATVGGAMPVVK 151 (327)
T ss_dssp HHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEE--CGGGSSTTSCCHH
T ss_pred HhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEE--EEEEeeecCHHHH
Confidence 66 4689999999987654333 3222 45666666666765 344455578899776 55555443 33
Q ss_pred HHHHHHhhhc-----CC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14499 197 SYFEWVQNLS-----NL-LWTEQEINLRLNNIICNAFDAIWELANTKKV 239 (262)
Q Consensus 197 s~~E~~~~~~-----~~-~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~ 239 (262)
.-.+++.... +. .-+-.-++.++++. ...+.+++..|++.|.
T Consensus 152 ~l~~~l~~~~I~~I~GIlnGT~nyilt~m~~~-g~~f~~~l~~Aq~~Gy 199 (327)
T 3do5_A 152 LAKRYLALCEIESVKGIFNGTCNYILSRMEEE-RLPYEHILKEAQELGY 199 (327)
T ss_dssp HHHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHTTS
T ss_pred HHHHHhhCCCccEEEEEECCCcCcchhhcCcC-CcCHHHHHHHHHHcCC
Confidence 3333332100 00 00112244445322 3568899999999875
No 24
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.45 E-value=1.9e-06 Score=77.06 Aligned_cols=116 Identities=18% Similarity=0.241 Sum_probs=80.8
Q ss_pred HHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceec--C
Q psy14499 48 IASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI--N 125 (262)
Q Consensus 48 ~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~--~ 125 (262)
++...+.++.+++|.|+|+|++|+.+++.|..+|++|+ +.|+ +++++....+ .+ .+.+ +
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr----------~~~~~~~~~~-~g-------~~~~~~~ 205 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGAR----------ESDLLARIAE-MG-------MEPFHIS 205 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------SHHHHHHHHH-TT-------SEEEEGG
T ss_pred HHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEEC----------CHHHHHHHHH-CC-------CeecChh
Confidence 34556789999999999999999999999999999887 6663 3444333322 22 2221 1
Q ss_pred CCccccccCceEEeeCCccCcccccchhccC-ceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 126 DSKEFWSIPCDILIPAAIEDQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 126 ~~~~il~~~~DIlipaa~~~~it~e~a~~~~-~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
+.++++ .++|+++.|.+.+.++.+....++ ..+++.-+-+|..-+. +..+++|+.++
T Consensus 206 ~l~~~l-~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 206 KAAQEL-RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp GHHHHT-TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred hHHHHh-cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEE
Confidence 123344 489999999998888887777664 4588888876652222 45577898775
No 25
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.42 E-value=2.1e-06 Score=79.98 Aligned_cols=127 Identities=12% Similarity=0.160 Sum_probs=91.4
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhc
Q psy14499 33 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT 112 (262)
Q Consensus 33 ~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~ 112 (262)
...+++-.++..+..+.++++.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.| +..- . ...
T Consensus 91 ~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d------------~~~~-~--~~~ 154 (380)
T 2o4c_A 91 NARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGLGWKVL-VCD------------PPRQ-A--REP 154 (380)
T ss_dssp THHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC------------HHHH-H--HST
T ss_pred ChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEE-EEc------------CChh-h--hcc
Confidence 35577888888888888889999999999999999999999999999999987 445 2210 0 111
Q ss_pred CCccCCCCceecCCCccccccCceEEeeCCcc---------CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCC
Q psy14499 113 RSIKDFNEGEKINDSKEFWSIPCDILIPAAIE---------DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKG 180 (262)
Q Consensus 113 g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~---------~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rg 180 (262)
+....+ .++++. +|||++.|.+. ++++.+....++ ..+++..+.+++ . .+..+.|++.+
T Consensus 155 -------g~~~~~-l~ell~-~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~ 225 (380)
T 2o4c_A 155 -------DGEFVS-LERLLA-EADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGA 225 (380)
T ss_dssp -------TSCCCC-HHHHHH-HCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTC
T ss_pred -------CcccCC-HHHHHH-hCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC
Confidence 111122 455663 89999988743 456666667775 558999999886 4 33467788877
Q ss_pred CeEe
Q psy14499 181 IILA 184 (262)
Q Consensus 181 i~~i 184 (262)
|.-.
T Consensus 226 i~~A 229 (380)
T 2o4c_A 226 DLEV 229 (380)
T ss_dssp CEEE
T ss_pred CceE
Confidence 6644
No 26
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.42 E-value=1.2e-05 Score=71.20 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++.|+..+++ ..+.++++++|+|+|.|.+|+.+++.|.+.|++|+ ++| -+.++..++.++.+
T Consensus 112 d~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~-v~~----------r~~~~~~~l~~~~g--- 173 (275)
T 2hk9_A 112 DWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVF-LWN----------RTKEKAIKLAQKFP--- 173 (275)
T ss_dssp HHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEE-EEC----------SSHHHHHHHTTTSC---
T ss_pred CHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEE-EEE----------CCHHHHHHHHHHcC---
Confidence 5667766654 45778899999999999999999999999999655 777 46666655544322
Q ss_pred CCCCceecCCCccccccCceEEeeCCccCccc--ccch--hcc-CceEEEecCCCCCCHHHHHHHHHCCCeEeccccccc
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQIT--INNA--NNV-TAKIILEGANGPTTTEADDILRDKGIILAPDVITNA 191 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~~~it--~e~a--~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~ 191 (262)
.+..++..+.+ .++|++|-|++..... .+.. ..+ ..++|++-+. ..|+- .+..+++|+.++|..-.-.
T Consensus 174 ----~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~-~~t~l-l~~a~~~g~~~v~g~~mlv 246 (275)
T 2hk9_A 174 ----LEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY-KETKL-LKKAKEKGAKLLDGLPMLL 246 (275)
T ss_dssp ----EEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS-SCCHH-HHHHHHTTCEEECSHHHHH
T ss_pred ----CeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC-ChHHH-HHHHHHCcCEEECCHHHHH
Confidence 22222133444 4899999999866431 1122 223 3568889888 44543 3455779999988765555
Q ss_pred hhhHHHHHHHHh
Q psy14499 192 GGVIVSYFEWVQ 203 (262)
Q Consensus 192 GGvi~s~~E~~~ 203 (262)
+..+.++..|..
T Consensus 247 ~q~~~a~~~w~g 258 (275)
T 2hk9_A 247 WQGIEAFKIWNG 258 (275)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC
Confidence 555566666653
No 27
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=98.40 E-value=1.7e-06 Score=81.95 Aligned_cols=130 Identities=20% Similarity=0.173 Sum_probs=96.8
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC---EEEEEeCCCceeeCCCCCCHHHH---
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKL--- 105 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~---~vv~V~D~~G~i~~~~GlD~~~l--- 105 (262)
|-.+.||--+..++.+++|..|+++++.||++.|.|..|.+++++|.+.|. ++. ++|++|.|++... |+...
T Consensus 193 DD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~-l~D~~Gli~~~R~-~l~~~~~~ 270 (487)
T 3nv9_A 193 DDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIV-MFDSKGSLHNGRE-DIKKDTRF 270 (487)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEE-EEETTEECCTTCH-HHHHCGGG
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEE-EEeccccccCCcc-hhhhhccc
Confidence 567799999999999999999999999999999999999999999999998 555 9999999997541 12110
Q ss_pred ---HHHHHhcCCccCCCCceecCCCccccccCceEEeeCC--ccCcccccchhccC-ceEEEecCCCC--CCHH
Q psy14499 106 ---QKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAA--IEDQITINNANNVT-AKIILEGANGP--TTTE 171 (262)
Q Consensus 106 ---~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa--~~~~it~e~a~~~~-~kiIve~AN~p--~t~e 171 (262)
.++.+... +. ...+..+++. .+||||-+| .++.+|+|.++++. -.||+.-+|-. ++||
T Consensus 271 ~~k~~~A~~~n-----~~--~~~~L~eav~-~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe 336 (487)
T 3nv9_A 271 YRKWEICETTN-----PS--KFGSIAEACV-GADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPY 336 (487)
T ss_dssp HHHHHHHHHSC-----TT--CCCSHHHHHT-TCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHH
T ss_pred HHHHHHHHhcc-----cc--cCCCHHHHHh-cCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHH
Confidence 11111110 00 0111334443 569999999 45999999999994 44999999964 2554
No 28
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.39 E-value=5.8e-06 Score=76.20 Aligned_cols=110 Identities=14% Similarity=0.202 Sum_probs=78.4
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.| +...+.+...+. +.+..++.++++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~-~~d-------r~~~~~~~~~~~-----------g~~~~~~l~ell- 218 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLL-YHD-------RLQMAPELEKET-----------GAKFVEDLNEML- 218 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEE-EEC-------SSCCCHHHHHHH-----------CCEECSCHHHHG-
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEE-EeC-------CCccCHHHHHhC-----------CCeEcCCHHHHH-
Confidence 457999999999999999999999999999977 444 333344332221 122232245666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
..|||++-|.+. ++++.+....++ ..+++..+.+++ . ....+.|++..|.
T Consensus 219 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 219 PKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 489999988764 466777777774 669999999987 3 4446888887765
No 29
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.35 E-value=4.8e-05 Score=67.08 Aligned_cols=129 Identities=10% Similarity=0.055 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
.+.|+..+++ ..|.++++++++|+|.|.+|+.+++.|.+.|++|+ |+| .+.+++.++.++.+..
T Consensus 102 D~~G~~~~L~----~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~-v~~----------R~~~~~~~la~~~~~~- 165 (271)
T 1nyt_A 102 DGVGLLSDLE----RLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVT-ITN----------RTVSRAEELAKLFAHT- 165 (271)
T ss_dssp HHHHHHHHHH----HHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHHTGGG-
T ss_pred CHHHHHHHHH----hcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEE-EEE----------CCHHHHHHHHHHhhcc-
Confidence 4777776654 45778999999999999999999999999998877 777 4666666665443211
Q ss_pred CCCCceecCCCccccccCceEEeeCCccCcccc-cch--hcc-CceEEEecCCCCC-CHHHHHHHHHCCCe-Eec
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITI-NNA--NNV-TAKIILEGANGPT-TTEADDILRDKGII-LAP 185 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~-e~a--~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~-~iP 185 (262)
......+ .+++.+.++||+|-|++...... .+. ..+ ...+|++-...|. |+.. +..+++|.. +++
T Consensus 166 --~~~~~~~-~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t~~~-~~a~~~G~~~~~~ 236 (271)
T 1nyt_A 166 --GSIQALS-MDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFL-AWCEQRGSKRNAD 236 (271)
T ss_dssp --SSEEECC-SGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHH-HHHHHTTCCEEEC
T ss_pred --CCeeEec-HHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCCHHH-HHHHHcCCCeecC
Confidence 0111111 22221147999999987543210 001 112 3468999988886 5544 556889987 553
No 30
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.31 E-value=2.6e-05 Score=69.97 Aligned_cols=129 Identities=13% Similarity=0.102 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCc
Q psy14499 38 GRGVFIIGSKIASKIN-LNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI 115 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g-~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~ 115 (262)
+.|+..++ +..+ .++++++++|+|.|.+|+.++..|.+.|+ +|+ |++ -+.+++.++.++.+..
T Consensus 124 ~~G~~~~l----~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~-v~n----------R~~~ka~~la~~~~~~ 188 (297)
T 2egg_A 124 GLGYVQAL----EEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERID-MAN----------RTVEKAERLVREGDER 188 (297)
T ss_dssp HHHHHHHH----HHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEE-EEC----------SSHHHHHHHHHHSCSS
T ss_pred HHHHHHHH----HHhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEE-EEe----------CCHHHHHHHHHHhhhc
Confidence 45555555 4456 78899999999999999999999999998 665 887 4677766666553321
Q ss_pred cCCCCceecC--CCccccccCceEEeeCCccCcccc---cch--hcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEecc
Q psy14499 116 KDFNEGEKIN--DSKEFWSIPCDILIPAAIEDQITI---NNA--NNV-TAKIILEGANGPT-TTEADDILRDKGIILAPD 186 (262)
Q Consensus 116 ~~~~~~~~~~--~~~~il~~~~DIlipaa~~~~it~---e~a--~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iPD 186 (262)
++ ...+ +..+.+ .++||+|-|++...... -+. ..+ ...+|++-.-+|. |+ ..+..+++|+.+++.
T Consensus 189 --~~--~~~~~~~~~~~~-~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~-ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 189 --RS--AYFSLAEAETRL-AEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETK-WLKEAKARGARVQNG 262 (297)
T ss_dssp --SC--CEECHHHHHHTG-GGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCH-HHHHHHHTTCEEECS
T ss_pred --cC--ceeeHHHHHhhh-ccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCH-HHHHHHHCcCEEECC
Confidence 00 1111 011222 47999999997654211 011 123 3568999998886 54 556678899988766
Q ss_pred c
Q psy14499 187 V 187 (262)
Q Consensus 187 ~ 187 (262)
.
T Consensus 263 l 263 (297)
T 2egg_A 263 V 263 (297)
T ss_dssp H
T ss_pred H
Confidence 4
No 31
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.30 E-value=5e-06 Score=76.95 Aligned_cols=130 Identities=12% Similarity=0.125 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHHHHHH--------------------hCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCE-EEEEeCCC
Q psy14499 33 RQKATGRGVFIIGSKIASK--------------------INLNIINSKISIQGFGNVGSVAANLFFKAGAK-IVAIQDDK 91 (262)
Q Consensus 33 ~~~aTg~Gv~~~~~~~~~~--------------------~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~-vv~V~D~~ 91 (262)
...+++-.++..+..+.|+ .+.++.|++|.|+|+|++|+.+|+.|..+|++ |+ +.|.
T Consensus 119 ~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~-~~d~- 196 (364)
T 2j6i_A 119 NVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELL-YYDY- 196 (364)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEE-EECS-
T ss_pred CcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEE-EECC-
Confidence 3456666666666555442 25579999999999999999999999999997 87 4452
Q ss_pred ceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCcc-----CcccccchhccC-ceEEEecCC
Q psy14499 92 TTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIE-----DQITINNANNVT-AKIILEGAN 165 (262)
Q Consensus 92 G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN 165 (262)
.....+.. .+.| ....++.++++ .++||++.|.+. ++++.+....++ ..+++..+.
T Consensus 197 ------~~~~~~~~----~~~g-------~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 197 ------QALPKDAE----EKVG-------ARRVENIEELV-AQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp ------SCCCHHHH----HHTT-------EEECSSHHHHH-HTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred ------CccchhHH----HhcC-------cEecCCHHHHH-hcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 22223221 1111 22222244566 489999999876 456666666664 558888888
Q ss_pred CCC-C-HHHHHHHHHCCCe
Q psy14499 166 GPT-T-TEADDILRDKGII 182 (262)
Q Consensus 166 ~p~-t-~ea~~~l~~rgi~ 182 (262)
+++ . .+..+.|++.+|.
T Consensus 259 G~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 259 GAICVAEDVAAALESGQLR 277 (364)
T ss_dssp GGGBCHHHHHHHHHHTSEE
T ss_pred CchhCHHHHHHHHHcCCCc
Confidence 876 4 4456888887765
No 32
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.27 E-value=4.2e-05 Score=68.31 Aligned_cols=126 Identities=11% Similarity=0.096 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++|...++ +..+.++++++++|.|.|.+|+.++..|.+.|+ +|+ |++ -+.++..++.++.+..
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~-v~~----------R~~~~a~~la~~~~~~- 173 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASIT-VTN----------RTFAKAEQLAELVAAY- 173 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEE-EEE----------SSHHHHHHHHHHHGGG-
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEE-EEE----------CCHHHHHHHHHHhhcc-
Confidence 56666655 456889999999999999999999999999997 655 777 3566666655443211
Q ss_pred CCCCceecCCCccccccCceEEeeCCccCccccc---chhcc-CceEEEecCCCCC-CHHHHHHHHHCCCe-Ee
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITIN---NANNV-TAKIILEGANGPT-TTEADDILRDKGII-LA 184 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e---~a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~-~i 184 (262)
......+ .+++. .++||+|-|++....... +...+ +..+|++-.-+|. |+-. +..+++|+. ++
T Consensus 174 --~~~~~~~-~~~l~-~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~~ 242 (281)
T 3o8q_A 174 --GEVKAQA-FEQLK-QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFN-QWARQHGCAQAI 242 (281)
T ss_dssp --SCEEEEE-GGGCC-SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHH-HHHHHTTCSEEE
T ss_pred --CCeeEee-HHHhc-CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHH-HHHHHCCCCEEE
Confidence 0112222 33333 689999999876543221 11223 3568999998886 6654 566899986 55
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.26 E-value=1.6e-05 Score=74.00 Aligned_cols=174 Identities=20% Similarity=0.167 Sum_probs=106.7
Q ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcC
Q psy14499 34 QKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR 113 (262)
Q Consensus 34 ~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g 113 (262)
..+++--++..+..+.+..|.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.| +.. . ... .
T Consensus 95 ~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d------------~~~--~-~~~-~ 157 (381)
T 3oet_A 95 AIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTL-LCD------------PPR--A-ARG-D 157 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC------------HHH--H-HTT-C
T ss_pred cchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEC------------CCh--H-Hhc-c
Confidence 4456666666667777888999999999999999999999999999999988 444 221 0 011 0
Q ss_pred CccCCCCceecCCCccccccCceEEeeCCcc---------CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCC
Q psy14499 114 SIKDFNEGEKINDSKEFWSIPCDILIPAAIE---------DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGI 181 (262)
Q Consensus 114 ~~~~~~~~~~~~~~~~il~~~~DIlipaa~~---------~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi 181 (262)
.....+ .++++ .+|||++-+.+. ++++.+....++ ..+++..+-+++ . .+..+.|++.++
T Consensus 158 ------~~~~~s-l~ell-~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i 229 (381)
T 3oet_A 158 ------EGDFRT-LDELV-QEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQP 229 (381)
T ss_dssp ------CSCBCC-HHHHH-HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCC
T ss_pred ------CcccCC-HHHHH-hhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCC
Confidence 111122 45566 489999987753 456666666664 569999999986 3 444677888776
Q ss_pred eE-eccccccchhhHHHHHHHH-hhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy14499 182 IL-APDVITNAGGVIVSYFEWV-QNLSNLLWTEQEINLRLNNIICNAFDAIWE 232 (262)
Q Consensus 182 ~~-iPD~~aN~GGvi~s~~E~~-~~~~~~~~~~~~v~~~l~~~~~~~~~~v~~ 232 (262)
.- .=|+..+=--.-...++.. --.+|..|...+...++...+.+++.+.+.
T Consensus 230 ~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~ 282 (381)
T 3oet_A 230 LSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIG 282 (381)
T ss_dssp EEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHc
Confidence 53 3344333221111211110 013466665445444444444455555443
No 34
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=98.25 E-value=8.1e-07 Score=85.59 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=96.2
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH----CCC-------EEEEEeCCCceeeCC-CC
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA-------KIVAIQDDKTTIYNP-NG 99 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~----~g~-------~vv~V~D~~G~i~~~-~G 99 (262)
|-.+.||--+..++.++++..|+++++.||++.|.|..|.++|++|.. .|. ++. ++|++|.|++. ++
T Consensus 256 DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~-~~D~~Gli~~~r~~ 334 (555)
T 1gq2_A 256 DDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIW-MVDSKGLIVKGRAS 334 (555)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEE-EEETTEECBTTCSS
T ss_pred CccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEE-EEECCCeeeCCCCC
Confidence 567799999999999999999999999999999999999999999987 674 455 99999999985 34
Q ss_pred CCHHHHHHHHHhcCCccCCCCceecCCCcccc-ccCceEEeeCCc-cCcccccchhcc----CceEEEecCCC
Q psy14499 100 FNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNV----TAKIILEGANG 166 (262)
Q Consensus 100 lD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~~~~DIlipaa~-~~~it~e~a~~~----~~kiIve~AN~ 166 (262)
|+..+ +...+.. . ...+..+++ .+++||||-+|. ++++|+|.+++| .-.||+.-+|-
T Consensus 335 l~~~k--~~~A~~~------~--~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 397 (555)
T 1gq2_A 335 LTPEK--EHFAHEH------C--EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 397 (555)
T ss_dssp CCTTG--GGGCBSC------C--CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred chHHH--HHHHhhc------C--CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 55432 1111110 0 011133444 358999999995 799999999999 35699999995
No 35
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=98.23 E-value=1.2e-06 Score=85.09 Aligned_cols=124 Identities=13% Similarity=0.049 Sum_probs=95.6
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH----CCC-------EEEEEeCCCceeeCC-CC
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA-------KIVAIQDDKTTIYNP-NG 99 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~----~g~-------~vv~V~D~~G~i~~~-~G 99 (262)
|-.+.||--+..++.++++..|+++++.||++.|.|..|.++|++|.. .|. ++. ++|++|.|++. ++
T Consensus 294 DDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~-~vD~~Gli~~~r~~ 372 (605)
T 1o0s_A 294 DDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIY-LMDIDGLVTKNRKE 372 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEE-EEETTEECBTTCSS
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEE-EEECCCceeCCCCC
Confidence 345689999999999999999999999999999999999999999988 785 455 99999999985 34
Q ss_pred CCHHHHHHHHHhcCCccCCCCceecCCCcccc-ccCceEEeeCCc-cCcccccchhcc----CceEEEecCCC
Q psy14499 100 FNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNV----TAKIILEGANG 166 (262)
Q Consensus 100 lD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~~~~DIlipaa~-~~~it~e~a~~~----~~kiIve~AN~ 166 (262)
|+..+ +. +..- .....+..+++ .+++||||-+|. ++++|+|.+++| .-.||+.-+|-
T Consensus 373 l~~~k-----~~---~A~~--~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 435 (605)
T 1o0s_A 373 MNPRH-----VQ---FAKD--MPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNP 435 (605)
T ss_dssp CCGGG-----TT---TCBS--SCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred chHHH-----HH---HHhh--cCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 55432 11 1100 00111133444 358999999995 799999999999 35699999995
No 36
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.21 E-value=4.7e-05 Score=68.18 Aligned_cols=176 Identities=12% Similarity=0.138 Sum_probs=105.8
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.+++.++|.|+|+|++|+.+++.|.+.|++|+ +.| .+.+++.++.+. | ....++..+++ .
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~-~~d----------r~~~~~~~~~~~-g-------~~~~~~~~e~~-~ 64 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVA-IWN----------RSPGKAAALVAA-G-------AHLCESVKAAL-S 64 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSHHHHHHHHHH-T-------CEECSSHHHHH-H
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-h
Confidence 34567899999999999999999999999987 667 577777666554 2 22222234444 4
Q ss_pred CceEEeeCCccCcccccc-----hhc-cCceEEEecCCCCCC--HHHHHHHHHCCCeEecccccc------chhh-----
Q psy14499 134 PCDILIPAAIEDQITINN-----ANN-VTAKIILEGANGPTT--TEADDILRDKGIILAPDVITN------AGGV----- 194 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~-----a~~-~~~kiIve~AN~p~t--~ea~~~l~~rgi~~iPD~~aN------~GGv----- 194 (262)
+||++|.|.+.+....+. ... .+.++|+...+.... .+..+.+.++|+.++.-.+.. .++.
T Consensus 65 ~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~g 144 (306)
T 3l6d_A 65 ASPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHT 144 (306)
T ss_dssp HSSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEE
T ss_pred cCCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEc
Confidence 799999998754322221 122 256688888777553 445577888999988543321 1111
Q ss_pred -HHHHHHH----Hhhh-cCCCCC--HHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q psy14499 195 -IVSYFEW----VQNL-SNLLWT--EQE-----INLRLNNIICNAFDAIWELANTKKVSLRTAAFIIG 249 (262)
Q Consensus 195 -i~s~~E~----~~~~-~~~~~~--~~~-----v~~~l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~a 249 (262)
--..++. ++.. ....+- -+. ....+...+...+.+.+..+++.|+++.+....+.
T Consensus 145 g~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~ 212 (306)
T 3l6d_A 145 GDREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLL 212 (306)
T ss_dssp ECHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 0122232 2222 112223 221 11122222345667778889999999877665543
No 37
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.19 E-value=5.9e-05 Score=67.01 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++|...+ +++..+.++++++++|.|.|.+|+.++..|.+.|+ +|+ |++ -+.++..++.++.+. .
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~-i~~----------R~~~~a~~la~~~~~-~ 167 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELV-IAN----------RDMAKALALRNELDH-S 167 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEE-EEC----------SCHHHHHHHHHHHCC-T
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEE-EEe----------CCHHHHHHHHHHhcc-C
Confidence 5666555 13556889999999999999999999999999997 655 777 366776666655432 0
Q ss_pred CCCCceecCCCccccccCceEEeeCCccCccccc---chhcc-CceEEEecCCCCC-CHHHHHHHHHCCCe-Ee
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITIN---NANNV-TAKIILEGANGPT-TTEADDILRDKGII-LA 184 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~e---~a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~-~i 184 (262)
.....+ .+++-..++||+|-|++...-... +...+ +..+|++-.-+|. |+ ..+..+++|+. ++
T Consensus 168 ---~~~~~~-~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~ 236 (272)
T 3pwz_A 168 ---RLRISR-YEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTP-FLRLAREQGQARLA 236 (272)
T ss_dssp ---TEEEEC-SGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCH-HHHHHHHHSCCEEE
T ss_pred ---CeeEee-HHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCH-HHHHHHHCCCCEEE
Confidence 122222 333333689999999876543211 11223 4568999999886 66 44455889986 55
No 38
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=98.18 E-value=4.6e-06 Score=76.15 Aligned_cols=173 Identities=17% Similarity=0.148 Sum_probs=101.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC--------CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA--------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 128 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~--------g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~ 128 (262)
+..+|+|+|+|+||+.+++.|.+. +.++++|+|++....++. +|++...+.... +.+..+... .. +.+
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~-~~-d~~ 80 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKVISYKEK-GSLDSLEYE-SI-SAS 80 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHHHHHHHT-TCGGGCCSE-EC-CHH
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHHhhhhcc-CCcccccCC-CC-CHH
Confidence 457999999999999999999764 489999999987777655 776665444332 222111000 01 245
Q ss_pred cccccCceEEeeCCccCcccccchhcc------CceEEEecCCCCCCHHH---HHHHHHCCCeEeccccccchh---hHH
Q psy14499 129 EFWSIPCDILIPAAIEDQITINNANNV------TAKIILEGANGPTTTEA---DDILRDKGIILAPDVITNAGG---VIV 196 (262)
Q Consensus 129 ~il~~~~DIlipaa~~~~it~e~a~~~------~~kiIve~AN~p~t~ea---~~~l~~rgi~~iPD~~aN~GG---vi~ 196 (262)
++++.+.||+++|++.+ .|.+.+..+ ..|.|+-....|+..++ .+.-+++|+.+. |-++.|+ ++.
T Consensus 81 ~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~--~ea~vg~giPii~ 157 (331)
T 3c8m_A 81 EALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIR--YEATVAGGVPLFS 157 (331)
T ss_dssp HHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCCHH
T ss_pred HHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEE--EEeecccccHHHH
Confidence 55566899999999876 334433322 45666665444554333 344467898776 3343333 344
Q ss_pred HHHHHHhhhcCCC-----CC--HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14499 197 SYFEWVQNLSNLL-----WT--EQEINLRLNNIICNAFDAIWELANTKKV 239 (262)
Q Consensus 197 s~~E~~~~~~~~~-----~~--~~~v~~~l~~~~~~~~~~v~~~a~~~~~ 239 (262)
...+++.. ..+. ++ ..-+..++++ ...+.+++..|++.|.
T Consensus 158 ~l~~~l~g-~~I~~I~GI~nGT~nyil~~m~~--g~~f~~~l~eAq~~Gy 204 (331)
T 3c8m_A 158 FIDYSVLP-SRIKKFRGIVSLTINYFIRELAN--KREFDDVLSEATKLGI 204 (331)
T ss_dssp HHHHHSTT-CCCCEEEEECCHHHHHHHHHHHT--TCCHHHHHHHHHHHTS
T ss_pred HHHHHhhc-CcccEEEEEEeccceeEecchhc--CCCHHHHHHHHHHcCC
Confidence 45555532 1010 11 1223334432 2357778888888764
No 39
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=98.18 E-value=1.1e-06 Score=84.99 Aligned_cols=126 Identities=17% Similarity=0.072 Sum_probs=95.5
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH----CCC-------EEEEEeCCCceeeCCC--
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK----AGA-------KIVAIQDDKTTIYNPN-- 98 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~----~g~-------~vv~V~D~~G~i~~~~-- 98 (262)
|-.+.||--+..++.+++|..|+++++.||++.|.|..|.++|++|.. .|. ++. ++|++|.|++..
T Consensus 258 DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~-~~D~~Gli~~~r~~ 336 (564)
T 1pj3_A 258 DDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIW-MFDKYGLLVKGRKA 336 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEE-EEETTEECBTTCSS
T ss_pred CCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEE-EEeCCCeEECCCcc
Confidence 445689999999999999999999999999999999999999999986 784 445 999999999853
Q ss_pred CCCHHHHHHHHHhcCCccCCCCceecCCCcccc-ccCceEEeeCCc-cCcccccchhccC----ceEEEecCCC
Q psy14499 99 GFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-SIPCDILIPAAI-EDQITINNANNVT----AKIILEGANG 166 (262)
Q Consensus 99 GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~~~~DIlipaa~-~~~it~e~a~~~~----~kiIve~AN~ 166 (262)
+|+..+ +...+.. +... ..+..+++ .+++||||-+|. ++++|+|.+++|. -.||+.-+|-
T Consensus 337 ~l~~~k--~~~A~~~-----~~~~-~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 402 (564)
T 1pj3_A 337 KIDSYQ--EPFTHSA-----PESI-PDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNP 402 (564)
T ss_dssp CCCTTT--GGGCBCC-----CSSC-CSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred cchHHH--HHHHHhc-----Cccc-cCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 465432 1111100 0000 01133444 358999999995 7999999999984 5699999995
No 40
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.18 E-value=6e-05 Score=68.14 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=82.5
Q ss_pred CChhHHHHHHHHHHHHHH----------------hCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCC
Q psy14499 34 QKATGRGVFIIGSKIASK----------------INLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNP 97 (262)
Q Consensus 34 ~~aTg~Gv~~~~~~~~~~----------------~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~ 97 (262)
..+++--++..+..+.|+ .+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|++
T Consensus 102 ~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~------ 174 (313)
T 2ekl_A 102 TDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVL-AYDIL------ 174 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEE-EECSS------
T ss_pred chHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCC------
Confidence 445665566666555554 2457999999999999999999999999999987 55531
Q ss_pred CCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH
Q psy14499 98 NGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT 170 (262)
Q Consensus 98 ~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~ 170 (262)
.++. .. .+.| .+..+ .++++ .++|+++.|.+. ++++.+....++ ..+++.-+-+++ ..
T Consensus 175 ----~~~~-~~-~~~g-------~~~~~-l~ell-~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~ 239 (313)
T 2ekl_A 175 ----DIRE-KA-EKIN-------AKAVS-LEELL-KNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNG 239 (313)
T ss_dssp ----CCHH-HH-HHTT-------CEECC-HHHHH-HHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCH
T ss_pred ----cchh-HH-HhcC-------ceecC-HHHHH-hhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCH
Confidence 1121 11 1221 22222 45555 489999998764 345555555664 568888888875 43
Q ss_pred H-HHHHHHHCCC
Q psy14499 171 E-ADDILRDKGI 181 (262)
Q Consensus 171 e-a~~~l~~rgi 181 (262)
+ ..+.|++.+|
T Consensus 240 ~aL~~aL~~g~i 251 (313)
T 2ekl_A 240 KALLDYIKKGKV 251 (313)
T ss_dssp HHHHHHHHTTCE
T ss_pred HHHHHHHHcCCC
Confidence 3 4677777665
No 41
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.17 E-value=6.1e-05 Score=66.51 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
+.|+..++ +..|.++++++++|.|.|.+|+.++..|.+.|.+|+ |++ -+.+++.++.++.+..
T Consensus 103 ~~G~~~~L----~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~-v~~----------R~~~~a~~l~~~~~~~-- 165 (272)
T 1p77_A 103 GIGLVTDL----QRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIV-LAN----------RTFSKTKELAERFQPY-- 165 (272)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEE-EEE----------SSHHHHHHHHHHHGGG--
T ss_pred HHHHHHHH----HHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHcccc--
Confidence 66666655 446778999999999999999999999999998876 777 4666666665442211
Q ss_pred CCCceecCCCccccccCceEEeeCCccCcccc-cch--hcc-CceEEEecCCCCC--CHHHHHHHHHCCCe-Eecc
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI-NNA--NNV-TAKIILEGANGPT--TTEADDILRDKGII-LAPD 186 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~it~-e~a--~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~-~iPD 186 (262)
......+ .+++...++||+|-|++...... .+. ..+ ...+|++-...|. |+. .+..+++|.. +++-
T Consensus 166 -~~~~~~~-~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~l-l~~a~~~G~~~~v~G 238 (272)
T 1p77_A 166 -GNIQAVS-MDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPF-IALCKSLGLTNVSDG 238 (272)
T ss_dssp -SCEEEEE-GGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHH-HHHHHHTTCCCEECS
T ss_pred -CCeEEee-HHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCHH-HHHHHHcCCCEeeCC
Confidence 0111111 22221137999999987544211 001 112 3468899988884 554 4556889987 7654
No 42
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.14 E-value=3.8e-05 Score=70.56 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=76.1
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
|.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.| +...+.+. +. +.+..++.++++
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-------r~~~~~~~-----~~--------g~~~~~~l~ell- 225 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIH-YHN-------RTRLSHAL-----EE--------GAIYHDTLDSLL- 225 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEE-EEC-------SSCCCHHH-----HT--------TCEECSSHHHHH-
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEE-EEC-------CCCcchhh-----hc--------CCeEeCCHHHHH-
Confidence 457899999999999999999999999999987 444 33233221 11 122232255666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CHH-HHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~e-a~~~l~~rgi~ 182 (262)
.+||+++-|.+. +.++.+....++ ..+++..+.+++ ..+ ..+.|++..|.
T Consensus 226 ~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 226 GASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 489999988764 566667677774 669999999987 333 45777776654
No 43
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.14 E-value=1.7e-05 Score=72.32 Aligned_cols=109 Identities=13% Similarity=0.209 Sum_probs=76.3
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
|.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|. ...+.+...+. + .+..+ .++++
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~-------~~~~~~~~~~~----g-------~~~~~-l~ell- 198 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQ-YHEA-------KALDTQTEQRL----G-------LRQVA-CSELF- 198 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEE-EECS-------SCCCHHHHHHH----T-------EEECC-HHHHH-
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECC-------CCCcHhHHHhc----C-------ceeCC-HHHHH-
Confidence 446899999999999999999999999999987 4453 22233322111 1 12222 45566
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
..+|+++-|.+. +.++.+....++ ..+++..+.+++ . .+..+.|++.+|.
T Consensus 199 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 199 ASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 479999988763 466666667774 569999999986 3 4456888888775
No 44
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.13 E-value=3.9e-05 Score=70.10 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=75.1
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|. . ...... + . +.+..+ .++++
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~-~~d~-------~---~~~~~~--~-~-------g~~~~~-l~ell- 192 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYDV-------V---KREDLK--E-K-------GCVYTS-LDELL- 192 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------S---CCHHHH--H-T-------TCEECC-HHHHH-
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEE-EECC-------C---cchhhH--h-c-------CceecC-HHHHH-
Confidence 457899999999999999999999999999988 5453 1 111111 1 1 122233 45666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.++||++.|.+. ++++.+....++ ..+++..+.+++ . .+..+.|++..|.
T Consensus 193 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 193 KESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred hhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 489999988663 466777777774 568999998886 4 4446778777665
No 45
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=98.10 E-value=7.9e-06 Score=77.44 Aligned_cols=142 Identities=14% Similarity=0.157 Sum_probs=91.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC---EEEEEeC----CCceeeCCCCCCHHHHHHH
Q psy14499 36 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA---KIVAIQD----DKTTIYNPNGFNIPKLQKY 108 (262)
Q Consensus 36 aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~---~vv~V~D----~~G~i~~~~GlD~~~l~~~ 108 (262)
.||--...++.++++..|.++++++|+|.|.|..|+++++.|.+.|+ +|+ |+| ++|.++..+ +.+++.++
T Consensus 164 gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~-vvd~~~~R~G~~~~a~--~~~~L~~~ 240 (439)
T 2dvm_A 164 GTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVR-VVELVNGKPRILTSDL--DLEKLFPY 240 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEE-EEEEETTEEEECCTTS--CHHHHSTT
T ss_pred EEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEE-EEEccCCCcCcccccc--chhHHHHH
Confidence 56644567778888888999999999999999999999999999998 555 898 888776543 21222221
Q ss_pred HHhcCCccCCCCceecCCCccccccCceEEeeCCcc--CcccccchhccC-ceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 109 VTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIE--DQITINNANNVT-AKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 109 ~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~--~~it~e~a~~~~-~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
++....... ......+..+.+ .++||||-|+.. +.++++....+. ..+|++-+|-.-|+-.++. +++|..++
T Consensus 241 ~~~~a~~~~--~~~~~~~L~e~l-~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A-~~~G~~iv 315 (439)
T 2dvm_A 241 RGWLLKKTN--GENIEGGPQEAL-KDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEA-KKAGARIV 315 (439)
T ss_dssp CHHHHTTSC--TTCCCSSHHHHH-TTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHH-HHHTCSEE
T ss_pred HHHHhhccc--cccccccHHHHh-ccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHH-HHcCCeEE
Confidence 111100000 000011122333 368999999997 899887777774 4599999664434333333 33465554
No 46
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=98.09 E-value=0.00013 Score=65.21 Aligned_cols=124 Identities=15% Similarity=0.062 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
++|+..++ +..+.++++++++|.|.|.+|++++..|.+.|++-|.|++ -+.++..++.++..
T Consensus 106 ~~G~~~~L----~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~n----------Rt~~ka~~La~~~~---- 167 (282)
T 3fbt_A 106 YIGFGKML----SKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVT----------RNPEKTSEIYGEFK---- 167 (282)
T ss_dssp HHHHHHHH----HHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEE----------SCHHHHHHHCTTSE----
T ss_pred HHHHHHHH----HHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEe----------CCHHHHHHHHHhcC----
Confidence 46665555 4568889999999999999999999999999994344777 35666655543221
Q ss_pred CCCceecCCCccccccCceEEeeCCccCcccc---cc--hhcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEecc
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI---NN--ANNV-TAKIILEGANGPT-TTEADDILRDKGIILAPD 186 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~it~---e~--a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iPD 186 (262)
...+++..+ + ++||+|-|++.+.... .+ ...+ +..+|++-..+|. ||=. +.-+++|..+++.
T Consensus 168 ---~~~~~~l~~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll-~~A~~~G~~~~~G 236 (282)
T 3fbt_A 168 ---VISYDELSN-L--KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLFL-KYARESGVKAVNG 236 (282)
T ss_dssp ---EEEHHHHTT-C--CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHHH-HHHHHTTCEEECS
T ss_pred ---cccHHHHHh-c--cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHHH-HHHHHCcCeEeCc
Confidence 111211122 2 8999999987654321 11 1122 3568999999997 5543 4447899877643
No 47
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.08 E-value=2.5e-05 Score=71.98 Aligned_cols=156 Identities=13% Similarity=0.137 Sum_probs=94.6
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|.+|+.+|+.|..+|++|+ +.|. +... .... +. +.+..++.++++
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~d~----------~~~~-~~~~-~~-------g~~~~~~l~ell- 213 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVL-VWGR----------ENSK-ERAR-AD-------GFAVAESKDALF- 213 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------HHHH-HHHH-HT-------TCEECSSHHHHH-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EECC----------CCCH-HHHH-hc-------CceEeCCHHHHH-
Confidence 346899999999999999999999999999988 4442 1111 1111 11 223332255666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC--CHHHHHHHHHCCCeE-eccccccchhhHHHHHHHH-
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT--TTEADDILRDKGIIL-APDVITNAGGVIVSYFEWV- 202 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~--t~ea~~~l~~rgi~~-iPD~~aN~GGvi~s~~E~~- 202 (262)
.++|+++-|.+. +.++.+....++ ..+++..+.+++ +.+..+.|++..|.- .=|+..+=- .- ....+.
T Consensus 214 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP-l~-~~~pL~~ 291 (352)
T 3gg9_A 214 EQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEP-IL-QGHTLLR 291 (352)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSC-CC-SCCGGGG
T ss_pred hhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCC-CC-CCChhhc
Confidence 489999988753 456666666664 568999999986 455678888888752 222221100 00 000111
Q ss_pred -hh---hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 203 -QN---LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 203 -~~---~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
.| .+|..|..++..+++.+...+++.+.+
T Consensus 292 ~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~ 324 (352)
T 3gg9_A 292 MENCICTPHIGYVERESYEMYFGIAFQNILDIL 324 (352)
T ss_dssp CTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12 336666656665556555555555554
No 48
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.08 E-value=3.5e-05 Score=72.01 Aligned_cols=110 Identities=9% Similarity=0.079 Sum_probs=73.6
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|+ .....+.. .+.| .+...+.++++
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~-~~d~-------~~~~~~~~----~~~G-------~~~~~~l~ell- 245 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLH-YTDR-------HRLPESVE----KELN-------LTWHATREDMY- 245 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECS-------SCCCHHHH----HHHT-------CEECSSHHHHG-
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEE-EEcC-------CccchhhH----hhcC-------ceecCCHHHHH-
Confidence 457999999999999999999999999999987 5452 21222211 1111 22222144566
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~ 182 (262)
..+||++.+.+. ++++.+....++ ..+++.-+.+++ .. +..+.|++..|.
T Consensus 246 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 246 PVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp GGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 489999988763 456666666664 568888888876 43 456777776554
No 49
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.07 E-value=1.1e-05 Score=74.55 Aligned_cols=113 Identities=17% Similarity=0.244 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc--c
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS--I 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~--~ 133 (262)
++.++|.|+|+|++|+.+|+.|.+.|..|+ +.| .+.+++.++.+. + ....++..++.. .
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~-v~d----------r~~~~~~~l~~~-g-------~~~~~s~~e~~~~a~ 80 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECV-VYD----------LNVNAVQALERE-G-------IAGARSIEEFCAKLV 80 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTT-T-------CBCCSSHHHHHHHSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHC-C-------CEEeCCHHHHHhcCC
Confidence 357899999999999999999999999987 777 577777666543 1 222222344442 2
Q ss_pred CceEEeeCCccCcccccchhc----c-CceEEEecCCCCC--CHHHHHHHHHCCCeEecccc
Q psy14499 134 PCDILIPAAIEDQITINNANN----V-TAKIILEGANGPT--TTEADDILRDKGIILAPDVI 188 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~----~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~ 188 (262)
.+|+++-|-+.+ ...+.+.. + ..++|+...|.+. +.+..+.+.++|+.+++-.+
T Consensus 81 ~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 81 KPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp SSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCC
Confidence 349999998776 33333333 3 4569999998874 45556788899999885443
No 50
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.06 E-value=2.4e-05 Score=71.87 Aligned_cols=156 Identities=14% Similarity=0.098 Sum_probs=90.8
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFF-KAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW 131 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~-~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il 131 (262)
+.++.|++|.|+|+|++|+.+|+.|. .+|.+|+ +.|. ..-..+.. .+ .+ .+..++.++++
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~-------~~~~~~~~---~~-~g-------~~~~~~l~ell 218 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDV-------APADAETE---KA-LG-------AERVDSLEELA 218 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS-------SCCCHHHH---HH-HT-------CEECSSHHHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECC-------CCcchhhH---hh-cC-------cEEeCCHHHHh
Confidence 56799999999999999999999999 9999987 5553 21222221 11 11 22222134555
Q ss_pred ccCceEEeeCCccC-----cccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe-EeccccccchhhHHHHHHHH
Q psy14499 132 SIPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII-LAPDVITNAGGVIVSYFEWV 202 (262)
Q Consensus 132 ~~~~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~-~iPD~~aN~GGvi~s~~E~~ 202 (262)
.++|+++.|.+.+ +++.+....++ ..+++.-+.+++ + .+..+.|.+..|. ..-|+..+-- .. ..++.
T Consensus 219 -~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~--~~~L~ 294 (348)
T 2w2k_A 219 -RRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QV--SKELI 294 (348)
T ss_dssp -HHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SC--CHHHH
T ss_pred -ccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CC--Cchhh
Confidence 4899999997654 44444555564 458888888875 4 3445777765554 2345443221 00 11222
Q ss_pred h--h---hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 203 Q--N---LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 203 ~--~---~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
+ | ..|..|...+...++.+.+.+++.+.+
T Consensus 295 ~~~nviltPH~~~~t~e~~~~~~~~~~~ni~~~~ 328 (348)
T 2w2k_A 295 EMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFL 328 (348)
T ss_dssp TSSSEEECCSCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEcCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 1 224555545555555555555555544
No 51
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.05 E-value=2.8e-05 Score=71.98 Aligned_cols=156 Identities=13% Similarity=0.115 Sum_probs=93.5
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.| +. .+.+.. . .. +.+..+ .++++ .
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~-~~d-------~~-~~~~~~---~-~~-------g~~~~~-l~ell-~ 229 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIR-VFD-------PW-LPRSML---E-EN-------GVEPAS-LEDVL-T 229 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEE-EEC-------SS-SCHHHH---H-HT-------TCEECC-HHHHH-H
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEE-EEC-------CC-CCHHHH---h-hc-------CeeeCC-HHHHH-h
Confidence 46889999999999999999999999999988 434 33 222221 1 11 122223 55666 5
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCeEeccccccchhhHHHHHHHHhh-
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGIILAPDVITNAGGVIVSYFEWVQN- 204 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~~- 204 (262)
.+||++-|.+. ++++.+....++ ..+++.-+-+++ . .+..+.|++..|...=|+..+=--..-+-+.-+.|
T Consensus 230 ~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nv 309 (365)
T 4hy3_A 230 KSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGF 309 (365)
T ss_dssp SCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTE
T ss_pred cCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCE
Confidence 89999987664 466677777774 558899998886 3 44467888776664444433211000000100111
Q ss_pred --hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 205 --LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 205 --~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
.+|..|...+...++.+...+++.+.+
T Consensus 310 ilTPHia~~t~e~~~~~~~~~~~ni~~~~ 338 (365)
T 4hy3_A 310 IRSAHRAGALDSAFKKMGDMVLEDMDLMD 338 (365)
T ss_dssp EECCSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 235556555666666655555554443
No 52
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.04 E-value=2.8e-05 Score=69.43 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCcee-cCCCccccccCc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK-INDSKEFWSIPC 135 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~-~~~~~~il~~~~ 135 (262)
+.++|.|+|+|++|..+++.|.+.|.+|+ +.| .+.+++.++.+. | ... .++..++. .+|
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~~~~~-g-------~~~~~~~~~e~~-~~a 65 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTW-GAD----------LNPQACANLLAE-G-------ACGAAASAREFA-GVV 65 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-T-------CSEEESSSTTTT-TTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHHc-C-------CccccCCHHHHH-hcC
Confidence 45789999999999999999999999987 667 577777666554 2 111 22244555 489
Q ss_pred eEEeeCCccCccccc-------chhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEec
Q psy14499 136 DILIPAAIEDQITIN-------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAP 185 (262)
Q Consensus 136 DIlipaa~~~~it~e-------~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iP 185 (262)
|++|.|.+.+....+ ..+.+ +.++|+...+.+. +.+..+.+.++|+.++.
T Consensus 66 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 66 DALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp SEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 999999886432222 22333 3568887776543 23445677888988764
No 53
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.03 E-value=5.5e-05 Score=72.46 Aligned_cols=106 Identities=14% Similarity=0.178 Sum_probs=74.1
Q ss_pred HHHHHHHHHH-HHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC
Q psy14499 40 GVFIIGSKIA-SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF 118 (262)
Q Consensus 40 Gv~~~~~~~~-~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~ 118 (262)
|...++...+ +..+..+.|++++|.|+|.+|+.+|+.|..+|++|+ ++| .|+.++.+.....
T Consensus 246 Gt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Vi-v~D----------~~~~~a~~Aa~~g------ 308 (488)
T 3ond_A 246 GCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVI-VTE----------IDPICALQATMEG------ 308 (488)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHTT------
T ss_pred cccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHhC------
Confidence 3333333333 445888999999999999999999999999999987 778 6776665554431
Q ss_pred CCceecCCCccccccCceEEeeCCc-cCcccccchhccC-ceEEEecCCC
Q psy14499 119 NEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANG 166 (262)
Q Consensus 119 ~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~-~kiIve~AN~ 166 (262)
....+ .++++ ..+|+++.++. .++++.+....++ .-+|+..+..
T Consensus 309 --~dv~~-lee~~-~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 309 --LQVLT-LEDVV-SEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp --CEECC-GGGTT-TTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred --CccCC-HHHHH-HhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 12222 34444 47999998875 4778777777774 3366666654
No 54
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.03 E-value=3e-05 Score=71.31 Aligned_cols=157 Identities=13% Similarity=0.122 Sum_probs=92.0
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|.+- +.. .. ...| .+...+.++++ .
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~-~~d~~~--------~~~-~~---~~~g-------~~~~~~l~ell-~ 222 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVL-FYDPYL--------SDG-VE---RALG-------LQRVSTLQDLL-F 222 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECTTS--------CTT-HH---HHHT-------CEECSSHHHHH-H
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EECCCc--------chh-hH---hhcC-------CeecCCHHHHH-h
Confidence 47899999999999999999999999999987 555321 111 11 1111 22222245566 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCeEe-ccccccchhhH-HHHHHHHh
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGIILA-PDVITNAGGVI-VSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~~i-PD~~aN~GGvi-~s~~E~~~ 203 (262)
.+||++.|.+. ++++.+....++ ..+++.-+.+++ . .+..+.|++.+|.-. -|+..+---.. .+-+.-..
T Consensus 223 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~ 302 (347)
T 1mx3_A 223 HSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAP 302 (347)
T ss_dssp HCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCS
T ss_pred cCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCC
Confidence 89999988654 456666666664 458889998876 4 345688888876522 22222110000 00000011
Q ss_pred h---hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 204 N---LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 204 ~---~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
| ..|..|..++....+.+...+++.+.+
T Consensus 303 nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 303 NLICTPHAAWYSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp SEEECSSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 235556556666666665555555544
No 55
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.02 E-value=0.00013 Score=66.66 Aligned_cols=108 Identities=15% Similarity=0.150 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|+ . .+.. ... +.| .+..+ .++++
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~-~~d~-------~-~~~~---~~~-~~g-------~~~~~-l~ell- 217 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTI-GYDP-------I-ISPE---VSA-SFG-------VQQLP-LEEIW- 217 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECS-------S-SCHH---HHH-HTT-------CEECC-HHHHG-
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEE-EECC-------C-cchh---hhh-hcC-------ceeCC-HHHHH-
Confidence 457999999999999999999999999999987 4442 2 1221 111 111 22222 45566
Q ss_pred cCceEEeeCCccC-----cccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.++|+++.|.+.+ +++.+....++ ..+++.-+-+++ . .+..+.|++..|.
T Consensus 218 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 218 PLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp GGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred hcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 4899999987653 45555666664 568888888876 3 3346778877654
No 56
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.02 E-value=0.00013 Score=65.18 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
++|...+++ ..+.++++++++|.|.|.+|++++..|.+.|++-|.|++ -+.++..++.++.+..
T Consensus 111 ~~G~~~~l~----~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~----------R~~~~a~~la~~~~~~-- 174 (283)
T 3jyo_A 111 VSGFGRGME----EGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVAD----------LDTSRAQALADVINNA-- 174 (283)
T ss_dssp HHHHHHHHH----HHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEEC----------SSHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH----HhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEE----------CCHHHHHHHHHHHHhh--
Confidence 566666654 456789999999999999999999999999995344877 3566655554322110
Q ss_pred CCC--ceecCCCccccc--cCceEEeeCCccCccccc--c--hhcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEec
Q psy14499 118 FNE--GEKINDSKEFWS--IPCDILIPAAIEDQITIN--N--ANNV-TAKIILEGANGPT-TTEADDILRDKGIILAP 185 (262)
Q Consensus 118 ~~~--~~~~~~~~~il~--~~~DIlipaa~~~~it~e--~--a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iP 185 (262)
+++ ...++ .+++-+ .++||+|-|++.+.-... + ...+ +..+|++-..+|. ||=. +.-+++|..+++
T Consensus 175 ~~~~~i~~~~-~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll-~~A~~~G~~~~~ 250 (283)
T 3jyo_A 175 VGREAVVGVD-ARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELL-KAARALGCETLD 250 (283)
T ss_dssp HTSCCEEEEC-STTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHH-HHHHHHTCCEEC
T ss_pred cCCceEEEcC-HHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHH-HHHHHCcCeEeC
Confidence 111 11222 222221 379999999875432211 1 1223 3568999999996 6544 344778987763
No 57
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.01 E-value=9e-05 Score=66.39 Aligned_cols=169 Identities=11% Similarity=0.175 Sum_probs=100.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
..||.++|+|++|..+|+.|.+.|++|+ +.| .+.+++.++.+. +++..+++.++. .+|||
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~-v~d----------r~~~~~~~l~~~--------G~~~~~s~~e~~-~~~dv 64 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELV-VWN----------RTASKAEPLTKL--------GATVVENAIDAI-TPGGI 64 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEE-EC-----------------CTTTTT--------TCEECSSGGGGC-CTTCE
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHc--------CCeEeCCHHHHH-hcCCc
Confidence 4689999999999999999999999987 766 444444333222 344444355555 58999
Q ss_pred EeeCCccCc-----ccccchhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH--------------
Q psy14499 138 LIPAAIEDQ-----ITINNANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI-------------- 195 (262)
Q Consensus 138 lipaa~~~~-----it~e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi-------------- 195 (262)
++-|-+.+. +.++....+ +.++|++..+... +.+..+.+.++|+.++=-.+. ||..
T Consensus 65 vi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVs--Gg~~~a~~g~l~im~gG~ 142 (297)
T 4gbj_A 65 VFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIF--ARPEAVRAKVGNICLSGN 142 (297)
T ss_dssp EEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCCEEEEEEC
T ss_pred eeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcC--CCccccccccceeecccc
Confidence 998866432 222323333 4568888887653 456678889999999844433 3321
Q ss_pred HHHHHHHhh----hcC--CCC----CHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Q psy14499 196 VSYFEWVQN----LSN--LLW----TEQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAFII 248 (262)
Q Consensus 196 ~s~~E~~~~----~~~--~~~----~~~~----v~~~l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~ 248 (262)
-..+|-++. ... +++ ..-+ +...+...+...+.+.+..+++.|+++.+...++
T Consensus 143 ~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l 209 (297)
T 4gbj_A 143 AGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEML 209 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 112222221 110 111 1122 3344555556677888899999999998765544
No 58
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.99 E-value=5.3e-05 Score=68.35 Aligned_cols=107 Identities=19% Similarity=0.266 Sum_probs=71.9
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|++ .+.+ .. .+.| .+..+ .++++ .
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~--------~~~~---~~-~~~g-------~~~~~-l~ell-~ 195 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYDPY--------PNEE---RA-KEVN-------GKFVD-LETLL-K 195 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS--------CCHH---HH-HHTT-------CEECC-HHHHH-H
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEE-EECCC--------CChh---hH-hhcC-------ccccC-HHHHH-h
Confidence 47899999999999999999999999999987 55531 1111 11 1211 22223 45566 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~ 182 (262)
++|+++.|.+. ++++.+....++ ..+++.-+-+++ .. +..+.|++..|.
T Consensus 196 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 196 ESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 89999998764 445555556664 457888888875 43 346778777654
No 59
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.99 E-value=0.00022 Score=62.94 Aligned_cols=169 Identities=14% Similarity=0.158 Sum_probs=98.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|++|+ +.| .+.+++.+..+. +....++..++. .+||++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvv 61 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVT-IWN----------RSPEKAEELAAL--------GAERAATPCEVV-ESCPVT 61 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSGGGGHHHHHT--------TCEECSSHHHHH-HHCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEE-EEc----------CCHHHHHHHHHC--------CCeecCCHHHHH-hcCCEE
Confidence 689999999999999999999999987 667 455555555443 122233234444 479999
Q ss_pred eeCCccCcccccch-------hcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH-------------
Q psy14499 139 IPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 195 (262)
Q Consensus 139 ipaa~~~~it~e~a-------~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi------------- 195 (262)
+.|.+......+.. +.+ +.++|+...+.+. +.+..+.+.++|+.++.-.+. |+..
T Consensus 62 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~~gg 139 (287)
T 3pef_A 62 FAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVS--GSKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCc--CCHHHHhcCCEEEEEeC
Confidence 99987532222222 233 4567887766543 244456778899988732222 2221
Q ss_pred -HHHHHHHhh----hc----CC-CCCHHHHHHHHHHH----HHHHHHHHHHHHhhcCCCHHHHHHHHH
Q psy14499 196 -VSYFEWVQN----LS----NL-LWTEQEINLRLNNI----ICNAFDAIWELANTKKVSLRTAAFIIG 249 (262)
Q Consensus 196 -~s~~E~~~~----~~----~~-~~~~~~v~~~l~~~----~~~~~~~v~~~a~~~~~~~r~aa~~~a 249 (262)
-..++.++. .. .. .....+....+.+. +...+.+.+..+++.|+++.+..-.+.
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~ 207 (287)
T 3pef_A 140 DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIG 207 (287)
T ss_dssp CHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 111222221 11 00 01122222222332 234677888889999999888766654
No 60
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.97 E-value=4.8e-05 Score=69.17 Aligned_cols=108 Identities=13% Similarity=0.178 Sum_probs=70.6
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|.+. -..+.+ .+. +....+ .++++ .
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~-------~~~~~~----~~~-------g~~~~~-l~e~l-~ 209 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRF-LYTGRQ-------PRPEEA----AEF-------QAEFVS-TPELA-A 209 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEE-EEESSS-------CCHHHH----HTT-------TCEECC-HHHHH-H
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCC-------cchhHH----Hhc-------CceeCC-HHHHH-h
Confidence 46899999999999999999999999999987 545211 112221 111 122222 44555 4
Q ss_pred CceEEeeCCccC-----cccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 134 PCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
+||+++.|.+.. +++.+....++ ..+++..+.+++ + .+..+.|++.++.
T Consensus 210 ~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 210 QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 899999998754 34444445554 457888888865 4 4456778776653
No 61
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.93 E-value=8.4e-06 Score=75.28 Aligned_cols=171 Identities=11% Similarity=0.115 Sum_probs=97.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC----CCEEEEEeCCCceeeCCC--CCCH-HHHHHHHHhc-CCccCCCCceecCCCc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA----GAKIVAIQDDKTTIYNPN--GFNI-PKLQKYVTFT-RSIKDFNEGEKINDSK 128 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~----g~~vv~V~D~~G~i~~~~--GlD~-~~l~~~~~~~-g~~~~~~~~~~~~~~~ 128 (262)
+..+|+|+|+|.||+.+++.|.+. +.++++|+|++...++++ |++. ....+..+.. + ...+ .+
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~--------~~~d-id 73 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT--------KTLP-LD 73 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC--------BCCC-HH
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccC--------CCCC-HH
Confidence 447899999999999999999885 379999999987778776 8765 3333333321 1 0001 22
Q ss_pred cccc-----cCceEEeeCCccCcccccchhcc-CceEEEecCCCCCC---HHHHHHH--HHCCCeEeccccccchh---h
Q psy14499 129 EFWS-----IPCDILIPAAIEDQITINNANNV-TAKIILEGANGPTT---TEADDIL--RDKGIILAPDVITNAGG---V 194 (262)
Q Consensus 129 ~il~-----~~~DIlipaa~~~~it~e~a~~~-~~kiIve~AN~p~t---~ea~~~l--~~rgi~~iPD~~aN~GG---v 194 (262)
.+++ ...||+++|++....-.....-+ ..|.|+-+...|++ .++.++. +++|+.+. |-++.|+ +
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~--~Ea~vg~giPi 151 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVY--HEATVGAGLPI 151 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEE--CGGGTTTTSSC
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEE--EccccccCCcH
Confidence 2321 13499999998643222222223 56777777667775 4444433 45787776 4444443 3
Q ss_pred HHHHHHHHhhhcCC-----CCC--HHHHHHHHH---HHHHHHHHHHHHHHhhcCC
Q psy14499 195 IVSYFEWVQNLSNL-----LWT--EQEINLRLN---NIICNAFDAIWELANTKKV 239 (262)
Q Consensus 195 i~s~~E~~~~~~~~-----~~~--~~~v~~~l~---~~~~~~~~~v~~~a~~~~~ 239 (262)
+....+++..-..+ -++ -.-++.++. +. ...+.++++.|++.|.
T Consensus 152 i~~l~~~l~~G~~I~~I~GIlnGT~nyil~~m~~~~~~-g~~f~~~l~eAq~~Gy 205 (358)
T 1ebf_A 152 ISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQAN-DVKFSDVVKVAKKLGY 205 (358)
T ss_dssp HHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHSCSSCC-CCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCeEEEEEEEeecceeeeccccccccc-CCCHHHHHHHHHHcCC
Confidence 44445555210000 011 111222221 00 1357888888888775
No 62
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.93 E-value=3.1e-05 Score=69.86 Aligned_cols=112 Identities=14% Similarity=0.163 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
+++.++|.|+|+|++|+.+++.|.+.|..|+ +.| .+++++.++.+. +.+..++..++. .+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~l~~~--------g~~~~~~~~e~~-~~ 87 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQ-VWN----------RTPARAASLAAL--------GATIHEQARAAA-RD 87 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTT--------TCEEESSHHHHH-TT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHC--------CCEeeCCHHHHH-hc
Confidence 3467899999999999999999999999977 667 577777666543 223333244444 48
Q ss_pred ceEEeeCCccCccccc------chhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEecc
Q psy14499 135 CDILIPAAIEDQITIN------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPD 186 (262)
Q Consensus 135 ~DIlipaa~~~~it~e------~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD 186 (262)
||+++.|.+......+ ..+.+ +.++|+...+.+. +.+..+.+.++|+.++.-
T Consensus 88 aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 88 ADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDT 148 (320)
T ss_dssp CSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 9999999875432222 22233 4568888877654 344557788899988743
No 63
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.91 E-value=7.8e-05 Score=67.94 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=73.4
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|++.. ...+++ ......+.++++
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~--~~~~~~------------------~~~~~~~l~ell- 192 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVL-GVSRSGR--ERAGFD------------------QVYQLPALNKML- 192 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC--CCTTCS------------------EEECGGGHHHHH-
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEE-EEcCChH--Hhhhhh------------------cccccCCHHHHH-
Confidence 457899999999999999999999999999988 4453220 000000 001111144555
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.+|||++-|.+. ++++.+....++ ..+++.-+.+++ . .+..+.|++..|.
T Consensus 193 ~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 250 (324)
T 3hg7_A 193 AQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLG 250 (324)
T ss_dssp HTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSS
T ss_pred hhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCce
Confidence 589999988663 566666666664 569999999986 3 4446888877763
No 64
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.90 E-value=5.2e-05 Score=69.06 Aligned_cols=108 Identities=12% Similarity=0.208 Sum_probs=73.9
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|++ .|.+..- .++++ .....++.++++
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~-~dr~~~~--~~~~~------------------~~~~~~~l~ell- 189 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIG-VNTTGHP--ADHFH------------------ETVAFTATADAL- 189 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-EESSCCC--CTTCS------------------EEEEGGGCHHHH-
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEE-ECCCcch--hHhHh------------------hccccCCHHHHH-
Confidence 4578999999999999999999999999999984 4432110 01110 001112245666
Q ss_pred cCceEEeeCCc-----cCcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAI-----EDQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~-----~~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.+||+++-|.+ .++++.+....++ ..+++..+.+++ . ....+.|++..|.
T Consensus 190 ~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 247 (324)
T 3evt_A 190 ATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLS 247 (324)
T ss_dssp HHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCS
T ss_pred hhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCce
Confidence 48999998866 3566666667674 558999999886 4 3345778777664
No 65
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.89 E-value=7.2e-05 Score=67.85 Aligned_cols=154 Identities=12% Similarity=0.066 Sum_probs=89.4
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|+. . -+.. ... +.+ .+..++.++++ .
T Consensus 142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~------~-~~~~---~~~-~~g-------~~~~~~l~ell-~ 201 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDID-YFDTH------R-ASSS---DEA-SYQ-------ATFHDSLDSLL-S 201 (320)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSS------C-CCHH---HHH-HHT-------CEECSSHHHHH-H
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCC------C-cChh---hhh-hcC-------cEEcCCHHHHH-h
Confidence 46899999999999999999999999999987 55520 1 1221 111 111 22222244555 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CHH-HHHHHHHCCCeE-eccccccchhhHHHHHHHHhh
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGIIL-APDVITNAGGVIVSYFEWVQN 204 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~e-a~~~l~~rgi~~-iPD~~aN~GGvi~s~~E~~~~ 204 (262)
++|+++.|.+. ++++.+....++ ..+++.-+.+++ ..+ ..+.|++..|.- .-|++.+-- .....+.+.
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP---~~~~~L~~~ 278 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP---NINEGYYDL 278 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT---SCCTTGGGC
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC---CCCChhhhC
Confidence 89999998764 345555555563 568888888865 433 467787776541 223332111 001112221
Q ss_pred -----hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 205 -----LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 205 -----~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
.+|..|..++..+++.+.. +++.+.+
T Consensus 279 ~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~ 309 (320)
T 1gdh_A 279 PNTFLFPHIGSAATQAREDMAHQA-NDLIDAL 309 (320)
T ss_dssp TTEEECSSCTTCBHHHHHHHHHHH-HHHHHHH
T ss_pred CCEEECCcCCcCcHHHHHHHHHHH-HHHHHHH
Confidence 2355555455555666655 5555554
No 66
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.89 E-value=4.9e-05 Score=69.34 Aligned_cols=107 Identities=15% Similarity=0.231 Sum_probs=70.9
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|.+. +.+.. .+.+ ....+ .++++ .
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~~~--------~~~~~----~~~g-------~~~~~-l~e~l-~ 199 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSRHR--------KVNVE----KELK-------ARYMD-IDELL-E 199 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECSSC--------CHHHH----HHHT-------EEECC-HHHHH-H
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCc--------chhhh----hhcC-------ceecC-HHHHH-h
Confidence 67899999999999999999999999999987 555311 11111 1111 12122 44555 4
Q ss_pred CceEEeeCCccC-----cccccchhccCceEEEecCCCCCC-HH-HHHHHHHCCCe
Q psy14499 134 PCDILIPAAIED-----QITINNANNVTAKIILEGANGPTT-TE-ADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~~-----~it~e~a~~~~~kiIve~AN~p~t-~e-a~~~l~~rgi~ 182 (262)
++|+++.|.+.+ +++.+....++..+++..+.+++. .+ ..+.|++..|.
T Consensus 200 ~aDiVil~vp~~~~t~~~i~~~~~~~mk~gilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 200 KSDIVILALPLTRDTYHIINEERVKKLEGKYLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp HCSEEEECCCCCTTTTTSBCHHHHHHTBTCEEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred hCCEEEEcCCCChHHHHHhCHHHHhhCCCCEEEECCCCcccCHHHHHHHHHcCCce
Confidence 899999998765 444444445532288999988864 33 35777776554
No 67
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.88 E-value=0.0001 Score=67.59 Aligned_cols=150 Identities=15% Similarity=0.157 Sum_probs=80.0
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|.+|+ +.|.+.. . .. +.....+.++++
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~-------~---------~~-------~~~~~~sl~ell- 220 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNRSTL-------S---------GV-------DWIAHQSPVDLA- 220 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC-------T---------TS-------CCEECSSHHHHH-
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCcc-------c---------cc-------CceecCCHHHHH-
Confidence 457899999999999999999999999999987 5553210 0 00 111222245555
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC--CHHHHHHHHHCCCeE-eccccccchhhHHHHHHHHh
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT--TTEADDILRDKGIIL-APDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~--t~ea~~~l~~rgi~~-iPD~~aN~GGvi~s~~E~~~ 203 (262)
.++|+++-|.+. ++++.+....++ ..+++..+.+++ +.+..+.|++..|.- .-|+..+=--. .+ .+.+
T Consensus 221 ~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~-~~--~L~~ 297 (340)
T 4dgs_A 221 RDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAI-RS--EFHT 297 (340)
T ss_dssp HTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSC-CS--HHHH
T ss_pred hcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCC-cc--chhh
Confidence 489999988763 556666666664 568999999987 344457777766642 23333221111 11 2222
Q ss_pred --h---hcCCCCCHHHHHHHHHHHHHHHHHHH
Q psy14499 204 --N---LSNLLWTEQEINLRLNNIICNAFDAI 230 (262)
Q Consensus 204 --~---~~~~~~~~~~v~~~l~~~~~~~~~~v 230 (262)
| .+|..|...+...++.+.+.+++.+.
T Consensus 298 ~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~ 329 (340)
T 4dgs_A 298 TPNTVLMPHQGSATVETRMAMGKLVLANLAAH 329 (340)
T ss_dssp SSSEEECSSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 23555554555555555554555444
No 68
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.88 E-value=0.00011 Score=70.24 Aligned_cols=97 Identities=16% Similarity=0.144 Sum_probs=71.9
Q ss_pred HhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 51 KINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 51 ~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
..+..+.|++|.|+|+|.+|+.+|+.|..+|++|+ +.| .++...++.... +.+..+ .+++
T Consensus 250 ~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d----------~~~~~~~~a~~~--------g~~~~~-l~el 309 (479)
T 1v8b_A 250 ATDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITE----------IDPICAIQAVME--------GFNVVT-LDEI 309 (479)
T ss_dssp HHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EEC----------SCHHHHHHHHTT--------TCEECC-HHHH
T ss_pred ccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEe----------CChhhHHHHHHc--------CCEecC-HHHH
Confidence 34778999999999999999999999999999988 666 455554333321 122223 4555
Q ss_pred cccCceEEeeCCc-cCcccccchhccC-ceEEEecCCCCC
Q psy14499 131 WSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT 168 (262)
Q Consensus 131 l~~~~DIlipaa~-~~~it~e~a~~~~-~kiIve~AN~p~ 168 (262)
+ .++|+++-|+. .++++.+....++ ..+|+.-+-+++
T Consensus 310 l-~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 310 V-DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp T-TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred H-hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence 5 48999999954 5778888888775 458888888766
No 69
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.87 E-value=4.4e-05 Score=68.67 Aligned_cols=168 Identities=15% Similarity=0.221 Sum_probs=105.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.++|+|++|...|+.|.+.|+.|+ |.| .+++++.++.+. +++..+++.++. .+|||+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~-v~d----------r~~~~~~~l~~~--------Ga~~a~s~~e~~-~~~dvv 63 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD----------LVQSAVDGLVAA--------GASAARSARDAV-QGADVV 63 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT--------TCEECSSHHHHH-TTCSEE
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHc--------CCEEcCCHHHHH-hcCCce
Confidence 489999999999999999999999987 777 678887777664 234333344554 589999
Q ss_pred eeCCccCc-----cccc--chhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhHH------------
Q psy14499 139 IPAAIEDQ-----ITIN--NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV------------ 196 (262)
Q Consensus 139 ipaa~~~~-----it~e--~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi~------------ 196 (262)
+-|=+... +.++ ....+ +-++|++..+... +.+..+.++++|+.++=-.+. ||+..
T Consensus 64 ~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVs--Gg~~~A~~G~L~imvGG 141 (300)
T 3obb_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVS--GGTAGAAAGTLTFMVGG 141 (300)
T ss_dssp EECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE--SCHHHHHHTCEEEEEES
T ss_pred eecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCC--CCHHHHHhCCEEEEEeC
Confidence 98855322 2221 12233 3578999888754 566778889999999843333 44421
Q ss_pred --HHHHHHhh----hc-CCC----CC----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Q psy14499 197 --SYFEWVQN----LS-NLL----WT----EQEINLRLNNIICNAFDAIWELANTKKVSLRTAAFII 248 (262)
Q Consensus 197 --s~~E~~~~----~~-~~~----~~----~~~v~~~l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~ 248 (262)
..||-++. .. .+. .. ..-+...+...+-..+.+.+..+++.|+++.+...++
T Consensus 142 ~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl 208 (300)
T 3obb_A 142 DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (300)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 12222211 00 000 01 1123334445555667788888899999887665443
No 70
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.87 E-value=9.3e-05 Score=71.07 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=76.1
Q ss_pred HhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 51 KINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 51 ~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
..|.++.|++|.|+|+|.||+.+|+.|..+|++|+ +.| .++...++.... +.+..+ .+++
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d----------~~~~~~~~a~~~--------G~~~~~-l~el 329 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTE----------IDPICALQAAME--------GYRVVT-MEYA 329 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC----------SCHHHHHHHHTT--------TCEECC-HHHH
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe----------CChHhHHHHHHc--------CCEeCC-HHHH
Confidence 35778999999999999999999999999999988 666 455543332221 222223 4556
Q ss_pred cccCceEEeeCCc-cCcccccchhccC-ceEEEecCCCCC--CHHHHHHHHH
Q psy14499 131 WSIPCDILIPAAI-EDQITINNANNVT-AKIILEGANGPT--TTEADDILRD 178 (262)
Q Consensus 131 l~~~~DIlipaa~-~~~it~e~a~~~~-~kiIve~AN~p~--t~ea~~~l~~ 178 (262)
+ .++||++-|.. .++++.+....++ .-+|+.-+-+++ ..++-+.|++
T Consensus 330 l-~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 330 A-DKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp T-TTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGGTTSEE
T ss_pred H-hcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHHHhhhc
Confidence 5 48999999964 5788888888885 558888888876 4333344433
No 71
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.87 E-value=0.00023 Score=66.99 Aligned_cols=155 Identities=15% Similarity=0.180 Sum_probs=93.7
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|+++.|+|+|++|+.+|+.|..+|++|+ +.|.... .. . .......+.++++
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~yd~~~~------~~----------~------~~~~~~~sl~ell- 206 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVR-YYDTSDK------LQ----------Y------GNVKPAASLDELL- 206 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECTTCC------CC----------B------TTBEECSSHHHHH-
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECCcch------hc----------c------cCcEecCCHHHHH-
Confidence 357899999999999999999999999999988 5553210 00 0 0122222245666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe-EeccccccchhhHHHH--HHH
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII-LAPDVITNAGGVIVSY--FEW 201 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~-~iPD~~aN~GGvi~s~--~E~ 201 (262)
..||+++-|.+. +.++.+....++ ..+++..+.+++ . ++..+.|++..+. ..-|+..+=--..-.. ..+
T Consensus 207 ~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL 286 (416)
T 3k5p_A 207 KTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPL 286 (416)
T ss_dssp HHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTT
T ss_pred hhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhH
Confidence 489999988764 567767677774 569999999987 3 4446777776654 3334322210000000 011
Q ss_pred H--hh---hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy14499 202 V--QN---LSNLLWTEQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 202 ~--~~---~~~~~~~~~~v~~~l~~~~~~~~~~v~ 231 (262)
. .| .+|..|..++..+.+...+.+++.+.+
T Consensus 287 ~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 287 QGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYS 321 (416)
T ss_dssp TTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 11 346666666666666665555555544
No 72
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.86 E-value=4.7e-05 Score=67.58 Aligned_cols=107 Identities=16% Similarity=0.257 Sum_probs=73.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|++|+ +.| .+.+++.++.+. +....++..+.+ .++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d----------~~~~~~~~~~~~--------g~~~~~~~~~~~-~~aDvv 63 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLN-VFD----------LVQSAVDGLVAA--------GASAARSARDAV-QGADVV 63 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHT--------TCEECSSHHHHH-TTCSEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEE-EEc----------CCHHHHHHHHHC--------CCeEcCCHHHHH-hCCCeE
Confidence 689999999999999999999999987 667 567776666554 122222234444 479999
Q ss_pred eeCCccCccccc-------chhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEec
Q psy14499 139 IPAAIEDQITIN-------NANNV-TAKIILEGANGPT--TTEADDILRDKGIILAP 185 (262)
Q Consensus 139 ipaa~~~~it~e-------~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iP 185 (262)
|.|.+......+ ..+.+ +-++|+...+.+. +.+..+.+.++|+.++.
T Consensus 64 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 64 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp EECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 999875432222 22233 3568888776654 24556777888988774
No 73
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.85 E-value=0.00036 Score=63.51 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=70.4
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.+++|.|+|+|++|+.+|+.|..+|.+|+ +.|.+. +.+.. .+.+ ....+ .++++
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~~~--------~~~~~----~~~g-------~~~~~-l~~~l- 202 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSRTR--------KEEVE----RELN-------AEFKP-LEDLL- 202 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CHHHH----HHHC-------CEECC-HHHHH-
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECCCc--------chhhH----hhcC-------cccCC-HHHHH-
Confidence 357899999999999999999999999999987 555311 12111 1111 12112 34555
Q ss_pred cCceEEeeCCccCc-----ccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIEDQ-----ITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~~~-----it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~ 182 (262)
.++|+++.|.+.+. ++.+....++ ..+++.-+.+++ +. +..+.|.+..|.
T Consensus 203 ~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 203 RESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCee
Confidence 48999999887654 3333444453 557888888876 33 345777776553
No 74
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.84 E-value=0.00045 Score=62.63 Aligned_cols=134 Identities=20% Similarity=0.180 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++|...++ +..+.++++++++|.|.|.+|++++..|.+.|+ +|+ |++++. -+.++..++.++.+...
T Consensus 138 ~~Gf~~~L----~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~-i~nR~~-------~~~~~a~~la~~~~~~~ 205 (315)
T 3tnl_A 138 GTGYMRAL----KEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEIS-IFNRKD-------DFYANAEKTVEKINSKT 205 (315)
T ss_dssp HHHHHHHH----HHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEE-EEECSS-------TTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH----HHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEE-EEECCC-------chHHHHHHHHHHhhhhc
Confidence 56665555 446889999999999999999999999999999 555 777421 11565555543321100
Q ss_pred CCCCcee--cCCCccccc--cCceEEeeCCccCcccc---cc---hhcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEe
Q psy14499 117 DFNEGEK--INDSKEFWS--IPCDILIPAAIEDQITI---NN---ANNV-TAKIILEGANGPT-TTEADDILRDKGIILA 184 (262)
Q Consensus 117 ~~~~~~~--~~~~~~il~--~~~DIlipaa~~~~it~---e~---a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~i 184 (262)
+. .... +++.+++-+ .++||+|-|++-+.... .+ ...+ +..+|++-..+|. ||=. +.-+++|..++
T Consensus 206 ~~-~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll-~~A~~~G~~~~ 283 (315)
T 3tnl_A 206 DC-KAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLL-EIAEEQGCQTL 283 (315)
T ss_dssp SC-EEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHH-HHHHHTTCEEE
T ss_pred CC-ceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHH-HHHHHCCCeEe
Confidence 00 0111 221111211 37999999987554321 11 2223 3568999999997 5544 44478998776
Q ss_pred c
Q psy14499 185 P 185 (262)
Q Consensus 185 P 185 (262)
+
T Consensus 284 ~ 284 (315)
T 3tnl_A 284 N 284 (315)
T ss_dssp C
T ss_pred C
Confidence 3
No 75
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.83 E-value=8.3e-05 Score=68.25 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=74.4
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|++. +. . .+. ..+..+ .++++
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~-~~d~~~--------~~-~----~~~--------~~~~~~-l~ell- 198 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVI-AYDVAY--------NP-E----FEP--------FLTYTD-FDTVL- 198 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC--------CG-G----GTT--------TCEECC-HHHHH-
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEE-EECCCh--------hh-h----hhc--------cccccC-HHHHH-
Confidence 346889999999999999999999999999988 545321 10 0 000 112223 55666
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.++||++-|.+. ++++.+....++ ..+++.-+-+++ . .+..+.|++..|.
T Consensus 199 ~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 256 (343)
T 2yq5_A 199 KEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIA 256 (343)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred hcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCc
Confidence 489999988773 566667667674 569999999886 3 4456888887663
No 76
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.82 E-value=0.00055 Score=60.65 Aligned_cols=131 Identities=15% Similarity=0.082 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++.|+..+++ ..+.++++++++|.|.|.+|+++++.|.+.| +|+ ++| .+.+++.++.++.+...
T Consensus 111 d~~G~~~~L~----~~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~-v~~----------r~~~~~~~l~~~~~~~~ 174 (287)
T 1nvt_A 111 DGIGARMALE----EEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NII-IAN----------RTVEKAEALAKEIAEKL 174 (287)
T ss_dssp HHHHHHHHHH----HHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEE-EEC----------SSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHCC-CEE-EEE----------CCHHHHHHHHHHHhhhc
Confidence 7788877765 3467889999999999999999999999999 876 777 35555544433211000
Q ss_pred CCCC--ceecCCCccccccCceEEeeCCccCccc---cc---chhcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEec
Q psy14499 117 DFNE--GEKINDSKEFWSIPCDILIPAAIEDQIT---IN---NANNV-TAKIILEGANGPT-TTEADDILRDKGIILAP 185 (262)
Q Consensus 117 ~~~~--~~~~~~~~~il~~~~DIlipaa~~~~it---~e---~a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iP 185 (262)
.... ...+.+..+.+ .++||+|-|+...... .. ....+ ...+|++-.-+|. |+ ..+..+++|..+++
T Consensus 175 ~~~~~~~~d~~~~~~~~-~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t~-ll~~a~~~G~~~~~ 251 (287)
T 1nvt_A 175 NKKFGEEVKFSGLDVDL-DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETV-LLKEAKKVNAKTIN 251 (287)
T ss_dssp TCCHHHHEEEECTTCCC-TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCH-HHHHHHTTTCEEEC
T ss_pred ccccceeEEEeeHHHhh-CCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccCH-HHHHHHHCCCEEeC
Confidence 0000 00011112223 4799999998754321 11 11233 3568899887775 54 33455788987654
No 77
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.81 E-value=4.1e-05 Score=68.25 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK 116 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~ 116 (262)
++|...++ +..+.++++++++|+|.|.+|++++..|.+.|+ +|+ |+++ +.++..++.+
T Consensus 101 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~-v~~R----------~~~~a~~la~------ 159 (277)
T 3don_A 101 GIGYVNGL----KQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLT-VANR----------TMSRFNNWSL------ 159 (277)
T ss_dssp HHHHHHHH----HHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCE-EECS----------CGGGGTTCCS------
T ss_pred HHHHHHHH----HHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEE-EEeC----------CHHHHHHHHH------
Confidence 66665555 445788999999999999999999999999998 555 7774 2222111111
Q ss_pred CCCCceecCCCccccccCceEEeeCCccCcccc--cc--hhcc-CceEEEecCCCCC-CHHHHHHHHHCCCeEec
Q psy14499 117 DFNEGEKINDSKEFWSIPCDILIPAAIEDQITI--NN--ANNV-TAKIILEGANGPT-TTEADDILRDKGIILAP 185 (262)
Q Consensus 117 ~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~--e~--a~~~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iP 185 (262)
.+ ....+++..+.+ .++||+|-|++.+.... ++ ...+ +..+|++-.-+|. |+ ..+..+++|+.+++
T Consensus 160 ~~-~~~~~~~~~~~~-~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~-ll~~A~~~G~~~~~ 231 (277)
T 3don_A 160 NI-NKINLSHAESHL-DEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTP-ILIEAEQRGNPIYN 231 (277)
T ss_dssp CC-EEECHHHHHHTG-GGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCH-HHHHHHHTTCCEEC
T ss_pred hc-ccccHhhHHHHh-cCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCH-HHHHHHHCcCEEeC
Confidence 00 011111112222 47999999987543221 11 1223 4568999998886 64 45556899987763
No 78
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.80 E-value=6.7e-05 Score=71.17 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH----------CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK----------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN 125 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~----------~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~ 125 (262)
++..+|+|+|+|+||+.+++.|.+ .+.++++|+| .|..+...... +....+
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d----------~~~~~~~~~~~---------~~~~~~ 68 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAV----------RNLDKAEALAG---------GLPLTT 68 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEEC----------SCHHHHHHHHT---------TCCEES
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEE----------CCHHHhhhhcc---------cCcccC
Confidence 356899999999999999988864 4689999999 45555433311 122334
Q ss_pred CCccccc-cCceEEeeCCccCcccccchhcc--CceEEEecCCCCCC---HHHHHHHHHCCCeEeccccccchhh---HH
Q psy14499 126 DSKEFWS-IPCDILIPAAIEDQITINNANNV--TAKIILEGANGPTT---TEADDILRDKGIILAPDVITNAGGV---IV 196 (262)
Q Consensus 126 ~~~~il~-~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~p~t---~ea~~~l~~rgi~~iPD~~aN~GGv---i~ 196 (262)
+.++++. .++|+++.|+++...+.+.+... ..|.|+-.....+. .+..+..+++|+.+. |.++.++- +.
T Consensus 69 d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~--~Ea~V~~giPii~ 146 (444)
T 3mtj_A 69 NPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVT--FEAAVAGGIPIIK 146 (444)
T ss_dssp CTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE--CGGGSSTTSCHHH
T ss_pred CHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEE--EEEeeeCChHHHH
Confidence 4667764 58999999998654555544332 34444433222222 233444577898885 44544432 33
Q ss_pred HHHHHHhhhc-----C-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14499 197 SYFEWVQNLS-----N-LLWTEQEINLRLNNIICNAFDAIWELANTKKV 239 (262)
Q Consensus 197 s~~E~~~~~~-----~-~~~~~~~v~~~l~~~~~~~~~~v~~~a~~~~~ 239 (262)
.-.|++.... + +..+-.-++.++.+. ...+.+++..|++.|.
T Consensus 147 ~LrelL~~~~Ig~I~GIlnGT~nyilt~m~~~-g~~f~~~l~eAq~lGy 194 (444)
T 3mtj_A 147 ALREGLTANRIEWLAGIINGTSNFILSEMRDK-GAAFDDVLKEAQRLGY 194 (444)
T ss_dssp HHHTTTTTSCEEEEEEECCHHHHHHHHHHHHH-CCCHHHHHHHHHHHTS
T ss_pred HHHHHHhCCCCceEEEEEcCCcccccccCCCC-CCCHHHHHHHHHHcCC
Confidence 3333332100 0 011122334444332 3468889999988774
No 79
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.79 E-value=0.00044 Score=61.38 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
++|...+++. .| +++++|+|.|.+|++++..|.+.|.+|+ |+++ +.++..++. +.+
T Consensus 106 ~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~v~-V~nR----------t~~ka~~la-~~~---- 161 (269)
T 3phh_A 106 ALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQVS-VLNR----------SSRGLDFFQ-RLG---- 161 (269)
T ss_dssp HHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------SCTTHHHHH-HHT----
T ss_pred HHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHHHHH-HCC----
Confidence 6677666653 23 8999999999999999999999997766 7763 233333333 222
Q ss_pred CCCceecCCCccccccCceEEeeCCccCc-----ccccchh-cc-CceEEEecCCCCCCHHHHHHHHHCCCeEecc
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQ-----ITINNAN-NV-TAKIILEGANGPTTTEADDILRDKGIILAPD 186 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~-----it~e~a~-~~-~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD 186 (262)
.+..+ .+++- ++||+|-|++.+. +..+-.. .+ +..+|++-.-.|-|+ ..+..+++|+.+++.
T Consensus 162 ---~~~~~-~~~l~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P~T~-ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 162 ---CDCFM-EPPKS--AFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFLTP-FLSLAKELKTPFQDG 230 (269)
T ss_dssp ---CEEES-SCCSS--CCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSSCCH-HHHHHHHTTCCEECS
T ss_pred ---CeEec-HHHhc--cCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCCchH-HHHHHHHCcCEEECC
Confidence 12222 23332 8999999987653 3222111 23 356899999999444 556668999877643
No 80
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.78 E-value=5.3e-05 Score=67.93 Aligned_cols=172 Identities=16% Similarity=0.164 Sum_probs=100.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
.+-++|.|+|+|++|..+++.|.+.|+.|+ +.| .+.+++.++.+. +.+..++..+++ .+|
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~-~~d----------r~~~~~~~l~~~--------g~~~~~~~~~~~-~~a 78 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVT-VWN----------RTLSKCDELVEH--------GASVCESPAEVI-KKC 78 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSGGGGHHHHHT--------TCEECSSHHHHH-HHC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHC--------CCeEcCCHHHHH-HhC
Confidence 345799999999999999999999999887 667 455555454432 222233234444 479
Q ss_pred eEEeeCCccCcccccc-------hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhHH---------
Q psy14499 136 DILIPAAIEDQITINN-------ANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV--------- 196 (262)
Q Consensus 136 DIlipaa~~~~it~e~-------a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi~--------- 196 (262)
|++|-|.+......+. ...+ +.++|+...+.+. +.+..+.+.++|+.++.-.+. |+...
T Consensus 79 Dvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~--g~~~~a~~g~l~i~ 156 (310)
T 3doj_A 79 KYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVS--GSKKPAEDGQLIIL 156 (310)
T ss_dssp SEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCC--CChhHHhcCCeEEE
Confidence 9999998754222222 2233 4568888776543 344556778899988743332 32211
Q ss_pred -----HHHHHHhh----hc----CC-CCCHHHHHHH----HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Q psy14499 197 -----SYFEWVQN----LS----NL-LWTEQEINLR----LNNIICNAFDAIWELANTKKVSLRTAAFIIG 249 (262)
Q Consensus 197 -----s~~E~~~~----~~----~~-~~~~~~v~~~----l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~a 249 (262)
..++.++. .. .. .....+.... +...+...+.+.+..+++.|+++.+....+.
T Consensus 157 ~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~ 227 (310)
T 3doj_A 157 AAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILD 227 (310)
T ss_dssp EEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 12222221 11 00 0111222222 2222334567888888999999887766554
No 81
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.76 E-value=5.6e-05 Score=67.82 Aligned_cols=103 Identities=14% Similarity=0.199 Sum_probs=72.0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|++..- .+ ..+..++.++++ .+
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~~-----~~------------------~~~~~~~l~ell-~~ 173 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVI-AYTRSSVD-----QN------------------VDVISESPADLF-RQ 173 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEE-EECSSCCC-----TT------------------CSEECSSHHHHH-HH
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEE-EEeccccc-----cc------------------cccccCChHHHh-hc
Confidence 5899999999999999999999999999998 44532100 00 011222244555 48
Q ss_pred ceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 135 CDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 135 ~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
||+++-|.+. ++++.+....++ ..+++.-+.+++ . .+..+.|++.++.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccce
Confidence 9999988763 456666666664 568999998876 3 4456888887765
No 82
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.76 E-value=2e-05 Score=70.30 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
.++|.|+|+|++|+.+++.|.+.|++|+ +.| .+.+++.++.+. +.+..++.+++.. +|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~-~~d----------r~~~~~~~~~~~--------g~~~~~~~~~~~~--aDv 73 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVT-VYD----------IRIEAMTPLAEA--------GATLADSVADVAA--ADL 73 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEE-EEC----------SSTTTSHHHHHT--------TCEECSSHHHHTT--SSE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHC--------CCEEcCCHHHHHh--CCE
Confidence 4689999999999999999999999987 667 344444444432 2233332455664 999
Q ss_pred EeeCCccCcccccc----hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEe
Q psy14499 138 LIPAAIEDQITINN----ANNV-TAKIILEGANGPT--TTEADDILRDKGIILA 184 (262)
Q Consensus 138 lipaa~~~~it~e~----a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~i 184 (262)
+|.|.+......+. .+.+ +.++|+...+.+. +.+..+.+.++|+.++
T Consensus 74 vi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 74 IHITVLDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred EEEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99998754322222 2223 3568888777653 3445567778899877
No 83
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.75 E-value=8.6e-05 Score=71.17 Aligned_cols=176 Identities=15% Similarity=0.157 Sum_probs=110.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc--cC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS--IP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~--~~ 134 (262)
..++|.|+|+|++|..+|+.|.+.|++|+ +.| .+.+++.++.+... . +. .....++.+++.. .+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~-v~d----------r~~~~~~~l~~~g~-~-g~-~i~~~~s~~e~v~~l~~ 68 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVC-AFN----------RTVSKVDDFLANEA-K-GT-KVVGAQSLKEMVSKLKK 68 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSTHHHHHHHHTTT-T-TS-SCEECSSHHHHHHTBCS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHhccc-C-CC-ceeccCCHHHHHhhccC
Confidence 44689999999999999999999999987 767 56777766655421 0 00 1111122444443 26
Q ss_pred ceEEeeCCccCcccccc----hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH------------
Q psy14499 135 CDILIPAAIEDQITINN----ANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------ 195 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~----a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi------------ 195 (262)
+|+++-|-+.+....+. .+.+ +.++|+...|... +.+..+.|.++|+.++.-.++ ||..
T Consensus 69 aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs--Gg~~gA~~G~~im~GG 146 (484)
T 4gwg_A 69 PRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS--GGEEGARYGPSLMPGG 146 (484)
T ss_dssp SCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE--SHHHHHHHCCEEEEEE
T ss_pred CCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc--CCHHHHhcCCeeecCC
Confidence 99999988775333333 3333 4679999999875 455557789999988754332 3331
Q ss_pred -HHHHHHHhh----hc-CC-------CCC--------HHHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHH
Q psy14499 196 -VSYFEWVQN----LS-NL-------LWT--------EQEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 248 (262)
Q Consensus 196 -~s~~E~~~~----~~-~~-------~~~--------~~~v~~~l~~~~~~~~~~v~~~a~~-~~~~~r~aa~~~ 248 (262)
-..++.++. .. .. .|- -.-+...++..+-..+.+.+..+++ .|+++.+.+.+.
T Consensus 147 ~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 147 NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 111222221 11 01 121 1124455667777888899999998 999988776654
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.75 E-value=0.00036 Score=63.62 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=70.8
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.+++|.|+|+|++|+.+|+.|..+|.+|+ +.|.+. +-.. +.....+.++++
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~~-----~~~~------------------g~~~~~~l~ell- 213 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRSK-----KPNT------------------NYTYYGSVVELA- 213 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSSC-----CTTC------------------CSEEESCHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCCc-----hhcc------------------CceecCCHHHHH-
Confidence 457899999999999999999999999999987 555321 0000 111122234555
Q ss_pred cCceEEeeCCccC-----cccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.++|+++.|.+.+ +++.+....++ ..+++..+.++. . .+..+.|.+.++.
T Consensus 214 ~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ 271 (333)
T 3ba1_A 214 SNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLG 271 (333)
T ss_dssp HTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSC
T ss_pred hcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCe
Confidence 4899999987653 44444444553 558888888876 3 4556778776664
No 85
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.75 E-value=0.00021 Score=68.58 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=66.6
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+..+.|++|+|+|+|.||+.+++.|..+|++|+ ++| .++.++....+. | ....+ .++++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d----------~~~~~~~~A~~~-G-------a~~~~-l~e~l- 327 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTE----------IDPINALQAMME-G-------FDVVT-VEEAI- 327 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-T-------CEECC-HHHHG-
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc-C-------CEEec-HHHHH-
Confidence 557899999999999999999999999999987 777 567665554432 2 22222 34454
Q ss_pred cCceEEeeCCcc-CcccccchhccC-ceEEEecCCCCC
Q psy14499 133 IPCDILIPAAIE-DQITINNANNVT-AKIILEGANGPT 168 (262)
Q Consensus 133 ~~~DIlipaa~~-~~it~e~a~~~~-~kiIve~AN~p~ 168 (262)
..+|+++.|+.. ++++.+....++ .-+|+.-+..+.
T Consensus 328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG
T ss_pred hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 489999999864 556656666664 335555555543
No 86
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.74 E-value=0.00054 Score=61.64 Aligned_cols=150 Identities=11% Similarity=0.100 Sum_probs=89.9
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|++.. +. + . ....+.++++ ..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~dr~~~---~~--------------~----~---~~~~~l~ell-~~ 174 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVR-GFSRTPK---EG--------------P----W---RFTNSLEEAL-RE 174 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEE-EECSSCC---CS--------------S----S---CCBSCSHHHH-TT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCCcc---cc--------------C----c---ccCCCHHHHH-hh
Confidence 6899999999999999999999999999987 5554221 00 1 0 0111245566 48
Q ss_pred ceEEeeCCccC-----cccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe-EeccccccchhhHHHHHHHHh--
Q psy14499 135 CDILIPAAIED-----QITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII-LAPDVITNAGGVIVSYFEWVQ-- 203 (262)
Q Consensus 135 ~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~-~iPD~~aN~GGvi~s~~E~~~-- 203 (262)
||+++-|.+.+ +++.+....++ ..+++.-+.+++ .. +..+.|++..|. ..-|+....+.... ...+.+
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~-~~~L~~~~ 253 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAK-DAEFFSLP 253 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGG-GHHHHTST
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCC-CChhhcCC
Confidence 99999887644 45555566664 568999999876 33 356778877664 22343311222211 122222
Q ss_pred h---hcCCCCC--HHHHHHHHHHHHHHHHHHHH
Q psy14499 204 N---LSNLLWT--EQEINLRLNNIICNAFDAIW 231 (262)
Q Consensus 204 ~---~~~~~~~--~~~v~~~l~~~~~~~~~~v~ 231 (262)
| .+|..|. .++..+++.+...+++.+.+
T Consensus 254 nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~ 286 (303)
T 1qp8_A 254 NVVATPWVAGGYGNERVWRQMVMEAVRNLITYA 286 (303)
T ss_dssp TEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 2355553 45555555555455555443
No 87
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.73 E-value=0.00061 Score=63.75 Aligned_cols=106 Identities=13% Similarity=0.240 Sum_probs=72.7
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|+++.|+|+|++|+.+|+.|..+|++|+ +.|.... . ..+ +.+..++.++++
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~-~~d~~~~------~----------~~~------~~~~~~~l~ell- 195 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVY-FYDIENK------L----------PLG------NATQVQHLSDLL- 195 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC------C----------CCT------TCEECSCHHHHH-
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEE-EEcCCch------h----------ccC------CceecCCHHHHH-
Confidence 457999999999999999999999999999987 5553210 0 001 122222245566
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~ 182 (262)
..||+++-|.+. ++++.+....++ ..+++..+-+++ .. +..+.|++..+.
T Consensus 196 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 196 NMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp HHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 479999988765 456666666664 568899998886 43 345777766553
No 88
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.72 E-value=0.00027 Score=68.30 Aligned_cols=107 Identities=18% Similarity=0.247 Sum_probs=71.3
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
|.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.| +.- +.+.. .+.| ....+ .++++
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~-~~d-------~~~-~~~~a----~~~g-------~~~~~-l~e~~- 194 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVV-AYD-------PYV-SPARA----AQLG-------IELLS-LDDLL- 194 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC-------TTS-CHHHH----HHHT-------CEECC-HHHHH-
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEC-------CCC-ChhHH----HhcC-------cEEcC-HHHHH-
Confidence 457899999999999999999999999999987 444 321 22221 1112 22222 44555
Q ss_pred cCceEEeeCCccC-----cccccchhccC-ceEEEecCCCCCCHH--HHHHHHHCCC
Q psy14499 133 IPCDILIPAAIED-----QITINNANNVT-AKIILEGANGPTTTE--ADDILRDKGI 181 (262)
Q Consensus 133 ~~~DIlipaa~~~-----~it~e~a~~~~-~kiIve~AN~p~t~e--a~~~l~~rgi 181 (262)
.+||+++-|.+.. +++.+....++ ..+|+.-+.+++-.+ ..+.|.+..|
T Consensus 195 ~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i 251 (529)
T 1ygy_A 195 ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV 251 (529)
T ss_dssp HHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE
T ss_pred hcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc
Confidence 4899999997654 45554555563 568888888876333 3466766544
No 89
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.72 E-value=9.9e-05 Score=70.56 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=105.9
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc-
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI- 133 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~- 133 (262)
.+..++|.|+|.|++|+.+|+.|.+.|..|+ +.| .+.+++.++.++.+. ++....++++++...
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~~----------r~~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l 76 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVS-IFN----------RSREKTEEVIAENPG----KKLVPYYTVKEFVESL 76 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEE-EEC----------SSHHHHHHHHHHSTT----SCEEECSSHHHHHHTB
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHHhhCCC----CCeEEeCCHHHHHhCC
Confidence 4677899999999999999999999999876 666 467777666654320 122222223444431
Q ss_pred -CceEEeeCCccCcccccchh----cc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH----------
Q psy14499 134 -PCDILIPAAIEDQITINNAN----NV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI---------- 195 (262)
Q Consensus 134 -~~DIlipaa~~~~it~e~a~----~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi---------- 195 (262)
++|+++-|-+.+....+.+. .+ +.++|+..+|+.. +.+..+.|.++|+.+++- ..+||..
T Consensus 77 ~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~--pv~gg~~~a~~g~~i~~ 154 (480)
T 2zyd_A 77 ETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGT--GVSGGEEGALKGPSIMP 154 (480)
T ss_dssp CSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCC--ccccCHhHHhcCCeEEe
Confidence 49999999877533333333 33 3569999999874 345567788889988743 2334332
Q ss_pred ---HHHHHHHhh----hcC--------CCCC----HH----HHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHH
Q psy14499 196 ---VSYFEWVQN----LSN--------LLWT----EQ----EINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 248 (262)
Q Consensus 196 ---~s~~E~~~~----~~~--------~~~~----~~----~v~~~l~~~~~~~~~~v~~~a~~-~~~~~r~aa~~~ 248 (262)
-..++.++. ... ..|- .. -+...+...+.+.+.+.+..+++ .|+++.+...+.
T Consensus 155 gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 155 GGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTF 231 (480)
T ss_dssp ESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 112222221 111 1121 11 12333445556777778888888 699887766444
No 90
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.69 E-value=0.00052 Score=63.93 Aligned_cols=110 Identities=14% Similarity=0.301 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC--CCcccc
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN--DSKEFW 131 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~--~~~~il 131 (262)
++.+++|+|+|+|.+|+.+++.|..+|+ +|+ ++| -+.+++.++.++.| ...++ +..+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~-v~~----------r~~~ra~~la~~~g-------~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL-VAN----------RTYERAVELARDLG-------GEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE-EEC----------SSHHHHHHHHHHHT-------CEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEE-EEe----------CCHHHHHHHHHHcC-------CceecHHhHHHHh
Confidence 5789999999999999999999999998 766 767 35555544444433 11111 122333
Q ss_pred ccCceEEeeCCcc--Ccccccchhc-c------CceEEEecCCCCC--CHHHHHHHHHCCCeE--eccc
Q psy14499 132 SIPCDILIPAAIE--DQITINNANN-V------TAKIILEGANGPT--TTEADDILRDKGIIL--APDV 187 (262)
Q Consensus 132 ~~~~DIlipaa~~--~~it~e~a~~-~------~~kiIve~AN~p~--t~ea~~~l~~rgi~~--iPD~ 187 (262)
.++||+|.|+.. .+++.+.... + +..++++.+. |. +|+. ..-.|+.+ +||+
T Consensus 226 -~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~l---~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 226 -ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEGV---ENIEDVEVRTIDDL 289 (404)
T ss_dssp -HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTTG---GGSTTEEEEEHHHH
T ss_pred -cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCccc---cccCCeEEEeHhhH
Confidence 489999999864 3344455544 2 3457888887 53 5442 22356666 5555
No 91
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.69 E-value=0.00023 Score=64.01 Aligned_cols=117 Identities=18% Similarity=0.174 Sum_probs=76.1
Q ss_pred HHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc
Q psy14499 50 SKINLNIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 128 (262)
Q Consensus 50 ~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~ 128 (262)
+++. ....++|.|+|+|++|+..++.|.+. |.+-|.|.| .+.++..++.++.+. ..+..++.+
T Consensus 128 ~~la-~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~d----------r~~~~~~~l~~~~~~-----~~~~~~~~~ 191 (312)
T 2i99_A 128 KFLK-PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWN----------RTKENAEKFADTVQG-----EVRVCSSVQ 191 (312)
T ss_dssp HHHS-CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEEC----------SSHHHHHHHHHHSSS-----CCEECSSHH
T ss_pred HHhC-CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEc----------CCHHHHHHHHHHhhC-----CeEEeCCHH
Confidence 4443 45778999999999999999999775 874455877 577777777665331 122223234
Q ss_pred cccccCceEEeeCCcc--Ccccccchhcc-CceEEEe-cCCCCCCHHHHHHHHHCCCeEecc
Q psy14499 129 EFWSIPCDILIPAAIE--DQITINNANNV-TAKIILE-GANGPTTTEADDILRDKGIILAPD 186 (262)
Q Consensus 129 ~il~~~~DIlipaa~~--~~it~e~a~~~-~~kiIve-~AN~p~t~ea~~~l~~rgi~~iPD 186 (262)
+.+ .++||++-|++. .++.+ ..+ ..++|+. +.+.|-..|..+.+.++|+.++-+
T Consensus 192 e~v-~~aDiVi~atp~~~~v~~~---~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 192 EAV-AGADVIITVTLATEPILFG---EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp HHH-TTCSEEEECCCCSSCCBCG---GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred HHH-hcCCEEEEEeCCCCcccCH---HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 444 479999999864 22222 223 2445555 677776666666778888766643
No 92
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.68 E-value=8.8e-05 Score=64.52 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=66.0
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+++.|.+.|..+|.++| .+.+++.+..++.+ ....++.++++ .
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~----------~~~~~~~~~~~~~g-------~~~~~~~~~~~-~ 67 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYS----------RTEESARELAQKVE-------AEYTTDLAEVN-P 67 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC----------SSHHHHHHHHHHTT-------CEEESCGGGSC-S
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe----------CCHHHHHHHHHHcC-------CceeCCHHHHh-c
Confidence 345567999999999999999999999998666888 46777666555432 22222244454 3
Q ss_pred CceEEeeCCccCcccccchhcc-----CceEEEecCCCCC
Q psy14499 134 PCDILIPAAIEDQITINNANNV-----TAKIILEGANGPT 168 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~-----~~kiIve~AN~p~ 168 (262)
++|+++.|.+.+.+ .+.+..+ +.++|+..+++..
T Consensus 68 ~~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 68 YAKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CCSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred CCCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 89999999987644 4333332 3568888887754
No 93
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=97.67 E-value=0.00029 Score=63.87 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=73.1
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|++. |.+.. ..++++ .+.+. .+ .++++
T Consensus 134 ~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~-dr~~~--~~~~~~---------------~~~~~--~~-l~ell- 191 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCW-SRSRK--SWPGVE---------------SYVGR--EE-LRAFL- 191 (315)
T ss_dssp CCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEE-ESSCC--CCTTCE---------------EEESH--HH-HHHHH-
T ss_pred CCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEE-cCCch--hhhhhh---------------hhccc--CC-HHHHH-
Confidence 34689999999999999999999999999999854 42111 001110 00000 11 34555
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.++||++-|.+. ++++.+....++ ..+++..+.+++ . ....+.|++..|.
T Consensus 192 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 192 NQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp HTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 489999988653 466666666674 669999999986 3 4446888777665
No 94
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.66 E-value=0.001 Score=62.86 Aligned_cols=126 Identities=18% Similarity=0.213 Sum_probs=73.9
Q ss_pred HHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC----------CC
Q psy14499 50 SKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD----------FN 119 (262)
Q Consensus 50 ~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~----------~~ 119 (262)
+.+++...-++|+|+|.|.||..+|..|.+ |..|+ +.| .|.+++.++.+..-.+.. ..
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D----------~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~ 95 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALD----------IVQAKVDMLNQKISPIVDKEIQEYLAEKPL 95 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EEC----------SCHHHHHHHHTTCCSSCCHHHHHHHHHSCC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEe----------cCHHHhhHHhccCCccccccHHHHHhhccC
Confidence 445566667899999999999999999988 99988 667 677766655442111100 00
Q ss_pred CceecCCCccccccCceEEeeCCccCccc--------------ccchhcc-CceEEEecCCCCC--CHHHHHHHHHCCCe
Q psy14499 120 EGEKINDSKEFWSIPCDILIPAAIEDQIT--------------INNANNV-TAKIILEGANGPT--TTEADDILRDKGII 182 (262)
Q Consensus 120 ~~~~~~~~~~il~~~~DIlipaa~~~~it--------------~e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~ 182 (262)
+.+..++..+.+ .+||++|.|.+++.-. .+.++ + +..+|+.-.-.|. |.+..+.+.+.++.
T Consensus 96 ~l~~ttd~~ea~-~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~ 173 (432)
T 3pid_A 96 NFRATTDKHDAY-RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVI 173 (432)
T ss_dssp CEEEESCHHHHH-TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEE
T ss_pred CeEEEcCHHHHH-hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEe
Confidence 111112122333 4899999998775311 11122 3 2345554444443 46666778888999
Q ss_pred Eeccccc
Q psy14499 183 LAPDVIT 189 (262)
Q Consensus 183 ~iPD~~a 189 (262)
+.|.++.
T Consensus 174 ~sPe~~~ 180 (432)
T 3pid_A 174 FSPEFLR 180 (432)
T ss_dssp ECCCCCC
T ss_pred ecCccCC
Confidence 9998864
No 95
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.66 E-value=8.3e-05 Score=64.42 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=60.3
Q ss_pred hCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHH--------------HHHHHHhcCCccC
Q psy14499 52 INLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPK--------------LQKYVTFTRSIKD 117 (262)
Q Consensus 52 ~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~--------------l~~~~~~~g~~~~ 117 (262)
...++..++|.|+|+|++|+.+|+.|.+.|..|+ +.| .+.++ +.++.++.+
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~-~~~----------r~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 77 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVT-IGT----------RDPKATLARAEPDAMGAPPFSQWLPEHP---- 77 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHTCC-------CCHHHHGGGST----
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEE-EEe----------CChhhhhhhhhhhhhcchhhhHHHhhcC----
Confidence 3557899999999999999999999999999987 667 34444 333332221
Q ss_pred CCCceecCCCccccccCceEEeeCCccCcccc---cc-hhccCceEEEecCCC
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI---NN-ANNVTAKIILEGANG 166 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~it~---e~-a~~~~~kiIve~AN~ 166 (262)
... ..+..+.+ .+||++|.|.+...+.. +. .+.+.-++|+..+|+
T Consensus 78 --~~~-~~~~~e~~-~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~ 126 (245)
T 3dtt_A 78 --HVH-LAAFADVA-AGAELVVNATEGASSIAALTAAGAENLAGKILVDIANP 126 (245)
T ss_dssp --TCE-EEEHHHHH-HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCC
T ss_pred --cee-ccCHHHHH-hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCC
Confidence 111 11133444 47999999988654432 11 223467799999985
No 96
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.65 E-value=4.6e-05 Score=67.29 Aligned_cols=170 Identities=14% Similarity=0.132 Sum_probs=97.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|..+++.|.+.|+.|+ +.| .+.+++.+..+. +....++..++. .+||++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~-~~d----------r~~~~~~~~~~~--------g~~~~~~~~~~~-~~advv 61 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVT-VWN----------RNPAKCAPLVAL--------GARQASSPAEVC-AACDIT 61 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEE-EEC----------SSGGGGHHHHHH--------TCEECSCHHHHH-HHCSEE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEE-EEc----------CCHHHHHHHHHC--------CCeecCCHHHHH-HcCCEE
Confidence 479999999999999999999999887 667 455555444443 122222234444 479999
Q ss_pred eeCCccCcccccc-------hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH-------------
Q psy14499 139 IPAAIEDQITINN-------ANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 195 (262)
Q Consensus 139 ipaa~~~~it~e~-------a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi------------- 195 (262)
+.|.+......+. .+.+ +.++|+...+.+. +.+..+.+.++|+.++.-.+. |+..
T Consensus 62 i~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~--g~~~~a~~g~l~~~~gg 139 (287)
T 3pdu_A 62 IAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVS--GTKKPAEDGTLIILAAG 139 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE--CCHHHHHHTCEEEEEEE
T ss_pred EEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCcc--CCHHHHhcCCEEEEEeC
Confidence 9998765222222 2333 4567887777543 234456778889887633222 2221
Q ss_pred -HHHHHHHhh----hc----CCC-CCHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q psy14499 196 -VSYFEWVQN----LS----NLL-WTEQEIN----LRLNNIICNAFDAIWELANTKKVSLRTAAFIIGC 250 (262)
Q Consensus 196 -~s~~E~~~~----~~----~~~-~~~~~v~----~~l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~a~ 250 (262)
-..++.++. .. ... ....+.. ..+...+...+.+.+..+++.|+++.+....+..
T Consensus 140 ~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 140 DQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 112222221 10 000 1111111 2222333455677888889999998877665543
No 97
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.64 E-value=0.00021 Score=56.46 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=59.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
+++|+|+|.|.+|+.+++.|.+.|++ |.++| .+.+++.++.++.+. .....++..+.+ .++|+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~----------r~~~~~~~~a~~~~~-----~~~~~~~~~~~~-~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAG----------RNIDHVRAFAEKYEY-----EYVLINDIDSLI-KNNDV 83 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEE----------SCHHHHHHHHHHHTC-----EEEECSCHHHHH-HTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc----------CCHHHHHHHHHHhCC-----ceEeecCHHHHh-cCCCE
Confidence 88999999999999999999999999 66888 577777666555431 111122122333 48999
Q ss_pred EeeCCccC--cccccchhccCceEEEecCC
Q psy14499 138 LIPAAIED--QITINNANNVTAKIILEGAN 165 (262)
Q Consensus 138 lipaa~~~--~it~e~a~~~~~kiIve~AN 165 (262)
+|.|++.. .++.+... +.++|++-++
T Consensus 84 vi~at~~~~~~~~~~~l~--~g~~vid~~~ 111 (144)
T 3oj0_A 84 IITATSSKTPIVEERSLM--PGKLFIDLGN 111 (144)
T ss_dssp EEECSCCSSCSBCGGGCC--TTCEEEECCS
T ss_pred EEEeCCCCCcEeeHHHcC--CCCEEEEccC
Confidence 99998754 22222211 2457777666
No 98
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.62 E-value=0.00016 Score=65.46 Aligned_cols=128 Identities=15% Similarity=0.164 Sum_probs=84.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCce
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 136 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~D 136 (262)
.||+|+|+|++|+..++.|.+. ++++++|+| .|.+++.+..++.+. ...+++.++++. .++|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~~~D 66 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD----------VREDRLREMKEKLGV------EKAYKDPHELIEDPNVD 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC----------SCHHHHHHHHHHHTC------SEEESSHHHHHHCTTCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHhCC------CceeCCHHHHhcCCCCC
Confidence 6899999999999999999874 799999999 678877776665431 123343566664 4899
Q ss_pred EEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 137 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 138 (344)
T 3ezy_A 67 AVLVCSSTN-THSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVE 138 (344)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred EEEEcCCCc-chHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHH
Confidence 999999754 333333332 445777752222223333 444678988877666655555555566654
No 99
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.62 E-value=0.00058 Score=61.82 Aligned_cols=130 Identities=11% Similarity=0.074 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCC---HHHHHHHHHhcCC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFN---IPKLQKYVTFTRS 114 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD---~~~l~~~~~~~g~ 114 (262)
++|...+++ ..+.++++++++|.|.|.+|++++..|.+.|++-|.|+++ + .++..++.++.+.
T Consensus 132 ~~Gf~~~L~----~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nR----------t~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 132 GTGHIRAIK----ESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNR----------KDDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC----------SSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----hcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEEC----------CCchHHHHHHHHHHhhh
Confidence 566666654 4578899999999999999999999999999943447773 4 5555554432211
Q ss_pred ccCCCC-ceecCCCccc---c--ccCceEEeeCCccCcc--cccc----hhcc-CceEEEecCCCCC-CHHHHHHHHHCC
Q psy14499 115 IKDFNE-GEKINDSKEF---W--SIPCDILIPAAIEDQI--TINN----ANNV-TAKIILEGANGPT-TTEADDILRDKG 180 (262)
Q Consensus 115 ~~~~~~-~~~~~~~~~i---l--~~~~DIlipaa~~~~i--t~e~----a~~~-~~kiIve~AN~p~-t~ea~~~l~~rg 180 (262)
. ++. ...++ .+++ . -.++||+|.|++.+.- +..+ ...+ +..+|++-..+|. ||=. +.-+++|
T Consensus 198 ~--~~~~v~~~~-~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll-~~A~~~G 273 (312)
T 3t4e_A 198 N--TDCVVTVTD-LADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLL-QQAQQAG 273 (312)
T ss_dssp H--SSCEEEEEE-TTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHH-HHHHHTT
T ss_pred c--cCcceEEec-hHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHH-HHHHHCC
Confidence 0 100 11122 1221 1 1379999999886542 2222 1234 4568999999997 5544 4447899
Q ss_pred CeEec
Q psy14499 181 IILAP 185 (262)
Q Consensus 181 i~~iP 185 (262)
..+++
T Consensus 274 ~~~~~ 278 (312)
T 3t4e_A 274 CKTID 278 (312)
T ss_dssp CEEEC
T ss_pred CeEEC
Confidence 87763
No 100
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.61 E-value=0.00038 Score=63.21 Aligned_cols=129 Identities=13% Similarity=0.136 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc-ccC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-SIP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~~~ 134 (262)
+..||+|+|+|++|+..++.|.+. ++++++|+| .|.+++.+..++.+- ..+++.++++ +.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d----------~~~~~~~~~~~~~g~-------~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS----------RTEDKREKFGKRYNC-------AGDATMEALLARED 66 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC----------SSHHHHHHHHHHHTC-------CCCSSHHHHHHCSS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHcCC-------CCcCCHHHHhcCCC
Confidence 457999999999999999999886 899999999 678877776665431 1133345666 468
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~ 140 (354)
T 3db2_A 67 VEMVIITVPND-KHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMID 140 (354)
T ss_dssp CCEEEECSCTT-SHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCEEEEeCChH-HHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHh
Confidence 99999998754 344444332 445888852222223443 334678888876665544444444445444
No 101
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.60 E-value=0.00049 Score=61.66 Aligned_cols=127 Identities=11% Similarity=0.132 Sum_probs=81.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
+||+|+|+|++|+..++.|.+. +.++++|+| .|.++..+..++.+. ...+++.+++++.++|+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d----------~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~D~ 65 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS----------RKLETAATFASRYQN------IQLFDQLEVFFKSSFDL 65 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC----------SSHHHHHHHGGGSSS------CEEESCHHHHHTSSCSE
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe----------CCHHHHHHHHHHcCC------CeEeCCHHHHhCCCCCE
Confidence 4899999999999999999876 689999999 577777666555431 12333345566568999
Q ss_pred EeeCCccCcccccchhcc---CceEEEecCCCCCC-HHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 138 LIPAAIEDQITINNANNV---TAKIILEGANGPTT-TEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 138 lipaa~~~~it~e~a~~~---~~kiIve~AN~p~t-~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++-|++... +.+.+... ...+++|-. ..++ .+++ +..+++|+.+...+...--..+....++++
T Consensus 66 V~i~tp~~~-h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 66 VYIASPNSL-HFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLA 136 (325)
T ss_dssp EEECSCGGG-HHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHT
T ss_pred EEEeCChHH-HHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhh
Confidence 999997543 34443332 344788843 2224 3333 334678888875555444444444455554
No 102
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.60 E-value=0.0014 Score=58.06 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
+.|... .++..|.++++++++|.|.|..+++++-.|.+.|++-+.|++ -+.++..++.+..+. .
T Consensus 109 ~~Gf~~----~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~n----------Rt~~ra~~la~~~~~--~ 172 (269)
T 3tum_A 109 GAGFLG----AAHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCD----------PSTARMGAVCELLGN--G 172 (269)
T ss_dssp HHHHHH----HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC----------SCHHHHHHHHHHHHH--H
T ss_pred hHHHHH----HHHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeC----------CCHHHHHHHHHHHhc--c
Confidence 455544 455678899999999999999999999999999986666887 366665555443211 1
Q ss_pred CCCceecCCCccccccCceEEeeCCccCcccc-------cchhccC-ceEEEecCCCCC-CHHHHHHHHHCCCeEec
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQITI-------NNANNVT-AKIILEGANGPT-TTEADDILRDKGIILAP 185 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~it~-------e~a~~~~-~kiIve~AN~p~-t~ea~~~l~~rgi~~iP 185 (262)
++...... ..+.+ .++|++|.|++-..-+. +....++ ..+|++-..+|. ||=. +.-+++|..+++
T Consensus 173 ~~~~~~~~-~~~~~-~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~T~ll-~~A~~~G~~~~~ 246 (269)
T 3tum_A 173 FPGLTVST-QFSGL-EDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPLL-NRARQVGCRIQT 246 (269)
T ss_dssp CTTCEEES-CCSCS-TTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSSSCHHH-HHHHHHTCEEEC
T ss_pred CCcceehh-hhhhh-hcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCCCCHHH-HHHHHCcCEEEC
Confidence 22211111 11122 47999999998654322 1122343 458999999997 5544 444788988763
No 103
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.60 E-value=0.00018 Score=59.02 Aligned_cols=111 Identities=14% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc--
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-- 131 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-- 131 (262)
++.+.+|+|+|+|.+|+.+++.|.+. |+.|+ +.| .|++++..+.+..-.+. +.+. ++.+.+.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~-vid----------~~~~~~~~~~~~g~~~~-~gd~---~~~~~l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISL-GIE----------IREEAAQQHRSEGRNVI-SGDA---TDPDFWERI 100 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEE-EEE----------SCHHHHHHHHHTTCCEE-ECCT---TCHHHHHTB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEE-EEE----------CCHHHHHHHHHCCCCEE-EcCC---CCHHHHHhc
Confidence 56688999999999999999999998 99988 666 47777666554321110 0011 1011111
Q ss_pred --ccCceEEeeCCccCccccc---chhcc--CceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 132 --SIPCDILIPAAIEDQITIN---NANNV--TAKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 132 --~~~~DIlipaa~~~~it~e---~a~~~--~~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
-.++|++|-|+..+..+.. .++++ ..++|+-. | +++..+.|++.|+..+
T Consensus 101 ~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~---~~~~~~~l~~~G~~~v 156 (183)
T 3c85_A 101 LDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIA-E---YPDQLEGLLESGVDAA 156 (183)
T ss_dssp CSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEE-S---SHHHHHHHHHHTCSEE
T ss_pred cCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEE-C---CHHHHHHHHHcCCCEE
Confidence 1379999998875433322 23333 34566542 2 4666677888887543
No 104
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=97.60 E-value=0.00054 Score=61.81 Aligned_cols=100 Identities=16% Similarity=0.246 Sum_probs=67.1
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|++. +-.. + . ..+.++++ .
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~~~-----~~~~-------------~-~------~~~l~ell-~ 192 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVV-YHARTP-----KPLP-------------Y-P------FLSLEELL-K 192 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSC-----CSSS-------------S-C------BCCHHHHH-H
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEE-EECCCC-----cccc-------------c-c------cCCHHHHH-h
Confidence 46899999999999999999999999999987 555321 0000 0 0 11134455 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCC
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGI 181 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi 181 (262)
++|+++-|.+. ++++.+....++ ..+++.-+.+++ .. +..+.|+ ..|
T Consensus 193 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 193 EADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred hCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 79999988654 445555555664 458888888876 43 3456676 544
No 105
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.58 E-value=0.00028 Score=63.18 Aligned_cols=125 Identities=11% Similarity=0.151 Sum_probs=77.3
Q ss_pred CeEEEEcCCHHHHHH-HHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCce
Q psy14499 59 SKISIQGFGNVGSVA-ANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 136 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~-a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~D 136 (262)
+||+|+|+|++|+.. ++.|.+.+.++++|+| .|.++..+..++.+.. ..+++.++++. .++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d----------~~~~~~~~~~~~~g~~------~~~~~~~~~l~~~~~D 64 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMS----------TSAERGAAYATENGIG------KSVTSVEELVGDPDVD 64 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEEC----------SCHHHHHHHHHHTTCS------CCBSCHHHHHTCTTCC
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEEC----------CCHHHHHHHHHHcCCC------cccCCHHHHhcCCCCC
Confidence 489999999999997 8777778899999999 5777776666554321 12333456664 4799
Q ss_pred EEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 137 ILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+++-|++... +.+.+... ...+++|- |+ + .+++ +..+++|+.+...+.----..+....++++
T Consensus 65 ~V~i~tp~~~-h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (332)
T 2glx_A 65 AVYVSTTNEL-HREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIA 136 (332)
T ss_dssp EEEECSCGGG-HHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHH
T ss_pred EEEEeCChhH-hHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHH
Confidence 9999997543 33333332 33467753 43 3 3333 334667887765443333333344445544
No 106
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.58 E-value=0.00017 Score=55.64 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc---cc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW---SI 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il---~~ 133 (262)
++++|+|+|+|.+|+.+++.|.+.|.+|+ +.| .+.+.+.+..+..+. .-+.+ . ..+.+.+. -.
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~-~~d----------~~~~~~~~~~~~~~~-~~~~~-d-~~~~~~l~~~~~~ 68 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIV-LID----------IDKDICKKASAEIDA-LVING-D-CTKIKTLEDAGIE 68 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHCSS-EEEES-C-TTSHHHHHHTTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEE-EEE----------CCHHHHHHHHHhcCc-EEEEc-C-CCCHHHHHHcCcc
Confidence 35789999999999999999999999987 556 356665555443221 00000 0 01011111 13
Q ss_pred CceEEeeCCccCcccc---cchhccC-ceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 134 PCDILIPAAIEDQITI---NNANNVT-AKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~~~it~---e~a~~~~-~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
++|+++-|+..+..+. +.++.++ .++|+ -.|.+. ..+.|++.|+.
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~~---~~~~l~~~g~~ 117 (140)
T 1lss_A 69 DADMYIAVTGKEEVNLMSSLLAKSYGINKTIA-RISEIE---YKDVFERLGVD 117 (140)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHTTCCCEEE-ECSSTT---HHHHHHHTTCS
T ss_pred cCCEEEEeeCCchHHHHHHHHHHHcCCCEEEE-EecCHh---HHHHHHHcCCC
Confidence 7999999987543322 2334443 34555 344443 34567788863
No 107
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.58 E-value=0.00016 Score=63.83 Aligned_cols=107 Identities=17% Similarity=0.237 Sum_probs=71.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
.++|.|+|+|++|+.+++.|.+.|.+|+ +.| .+.+++.++.+. + ....++.++.+ .++|+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D~ 63 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVY-AFD----------LMEANVAAVVAQ-G-------AQACENNQKVA-AASDI 63 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHTT-T-------CEECSSHHHHH-HHCSE
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-hCCCE
Confidence 3689999999999999999999999876 777 466666555443 1 22222233444 37999
Q ss_pred EeeCCccCcccccc-------hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEe
Q psy14499 138 LIPAAIEDQITINN-------ANNV-TAKIILEGANGPT--TTEADDILRDKGIILA 184 (262)
Q Consensus 138 lipaa~~~~it~e~-------a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~i 184 (262)
++.|.+......+. .+.+ ..++|+.-+|+.. ..+..+.+.++|+.++
T Consensus 64 vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 64 IFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp EEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99998653322222 2234 3568888888762 3445567777888876
No 108
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.57 E-value=0.00017 Score=56.44 Aligned_cols=106 Identities=11% Similarity=0.136 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc----c
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----S 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il----~ 132 (262)
+.++|+|.|+|.+|+.+++.|.+.|++|+ +.| .|++.+.+..+..-.+. +.+. . ..+.+ -
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~-~id----------~~~~~~~~~~~~~~~~~-~gd~---~-~~~~l~~~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVL-AVD----------KSKEKIELLEDEGFDAV-IADP---T-DESFYRSLDL 68 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHTTCEEE-ECCT---T-CHHHHHHSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHHCCCcEE-ECCC---C-CHHHHHhCCc
Confidence 35689999999999999999999999998 666 47777666654321100 0011 1 11222 1
Q ss_pred cCceEEeeCCccCccc---ccchhccC-ceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIEDQIT---INNANNVT-AKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~~~it---~e~a~~~~-~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
.++|++|-|+..+..+ ...++++. .++|+-. + +++-.+.|++.|+.
T Consensus 69 ~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~-~---~~~~~~~l~~~G~~ 118 (141)
T 3llv_A 69 EGVSAVLITGSDDEFNLKILKALRSVSDVYAIVRV-S---SPKKKEEFEEAGAN 118 (141)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEE-S---CGGGHHHHHHTTCS
T ss_pred ccCCEEEEecCCHHHHHHHHHHHHHhCCceEEEEE-c---ChhHHHHHHHcCCC
Confidence 3799999988743322 33444443 3344433 2 33445677888874
No 109
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.57 E-value=0.00015 Score=69.15 Aligned_cols=174 Identities=13% Similarity=0.121 Sum_probs=103.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc--Cc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI--PC 135 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~--~~ 135 (262)
.++|.|+|+|++|+.+++.|.+.|..|+ +.| .+.+++.++.++.+. ++....++.+++... ++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~-v~d----------r~~~~~~~l~~~~~~----~gi~~~~s~~e~v~~l~~a 69 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVA-IYN----------RTTSKTEEVFKEHQD----KNLVFTKTLEEFVGSLEKP 69 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSHHHHHHHHHHTTT----SCEEECSSHHHHHHTBCSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEE-EEc----------CCHHHHHHHHHhCcC----CCeEEeCCHHHHHhhccCC
Confidence 4689999999999999999999999875 767 467776666554320 122222224444432 59
Q ss_pred eEEeeCCccCcccccch----hcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH-------------
Q psy14499 136 DILIPAAIEDQITINNA----NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI------------- 195 (262)
Q Consensus 136 DIlipaa~~~~it~e~a----~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi------------- 195 (262)
|+++.|.+.+....+.+ +.+ ..++|++.+|+.. +.+..+.+.++|+.+++-. ++||..
T Consensus 70 DvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~p--v~gg~~~a~~g~~i~~gg~ 147 (474)
T 2iz1_A 70 RRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTG--VSGGEKGALLGPSMMPGGQ 147 (474)
T ss_dssp CEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEE--ECSHHHHHHHCCCEEEEEC
T ss_pred CEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCC--CCCChhhhccCCeEEecCC
Confidence 99999988753333332 233 3568999998863 3444566677888877432 233321
Q ss_pred HHHHHHHh----hhcC---------CCCCH--------HHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHH
Q psy14499 196 VSYFEWVQ----NLSN---------LLWTE--------QEINLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 248 (262)
Q Consensus 196 ~s~~E~~~----~~~~---------~~~~~--------~~v~~~l~~~~~~~~~~v~~~a~~-~~~~~r~aa~~~ 248 (262)
...++.++ .... ..|-. .-+...+...+...+.+.+..+++ .|+++.+...+.
T Consensus 148 ~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~ 222 (474)
T 2iz1_A 148 KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIF 222 (474)
T ss_dssp HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 11222222 2111 12211 112333455555677788888888 799987765444
No 110
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.56 E-value=0.00058 Score=61.32 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=83.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCce
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 136 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~D 136 (262)
+||+|+|+|++|+..++.|.+. ++++++|+| .|.+++.+..++.+ .. +++.++++. .++|
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~-------~~-~~~~~~~l~~~~~D 65 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVAD----------AFPAAAEAIAGAYG-------CE-VRTIDAIEAAADID 65 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHHTT-------CE-ECCHHHHHHCTTCC
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC----------CCHHHHHHHHHHhC-------CC-cCCHHHHhcCCCCC
Confidence 6899999999999999999885 899999999 67887777666543 12 333556664 4899
Q ss_pred EEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 137 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+++-|++.. .+.+.+... ...+++|-.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 66 ~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 137 (331)
T 4hkt_A 66 AVVICTPTD-THADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAID 137 (331)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred EEEEeCCch-hHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHH
Confidence 999998654 333333332 445777752111223343 344778988876665555555555555554
No 111
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.56 E-value=0.0029 Score=55.98 Aligned_cols=127 Identities=17% Similarity=0.140 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCc
Q psy14499 36 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSI 115 (262)
Q Consensus 36 aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~ 115 (262)
--+.|...+++ ..+.+ .+++++|+|.|.++++++..|.+.|++-|.|++ -+.++..++.++.+.
T Consensus 102 TD~~G~~~~l~----~~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~n----------Rt~~ka~~la~~~~~- 165 (271)
T 1npy_A 102 TDYIAIVKLIE----KYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA----------RNVKTGQYLAALYGY- 165 (271)
T ss_dssp HHHHHHHHHHH----HTTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEEC----------SCHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHH----HhCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe----------CCHHHHHHHHHHcCC-
Confidence 35566666664 34554 678999999999999999999999985444877 356666666554321
Q ss_pred cCCCCceecCCCccccccCceEEeeCCccCcccc---c--ch--hcc-CceEEEecCCCCCCHHHHHHHHHCCCeEeccc
Q psy14499 116 KDFNEGEKINDSKEFWSIPCDILIPAAIEDQITI---N--NA--NNV-TAKIILEGANGPTTTEADDILRDKGIILAPDV 187 (262)
Q Consensus 116 ~~~~~~~~~~~~~~il~~~~DIlipaa~~~~it~---e--~a--~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~ 187 (262)
...++. . ..++||+|-|++...... + +. ..+ ..++|++-...|......+.-+++|..+++..
T Consensus 166 ------~~~~~~-~--~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~~~i~Gl 236 (271)
T 1npy_A 166 ------AYINSL-E--NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQARGKQTISGA 236 (271)
T ss_dssp ------EEESCC-T--TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCEEECHH
T ss_pred ------ccchhh-h--cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCCCEEECCH
Confidence 111101 1 247999999998665321 1 11 123 35689999999863345555688998876443
No 112
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.56 E-value=0.0012 Score=60.09 Aligned_cols=106 Identities=17% Similarity=0.179 Sum_probs=71.3
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.|++|.|+|+|++|+.+|+.|..+|++|+ +.|.+.. +. + ++ + .+..+ .++++
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------~~------~--~~~~~-l~ell- 195 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVI-AYDPYPM---KG-D---------HP------D--FDYVS-LEDLF- 195 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---SS-C---------CT------T--CEECC-HHHHH-
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---hh-h---------Hh------c--cccCC-HHHHH-
Confidence 357899999999999999999999999999988 5553210 00 0 00 0 11122 44555
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CH-HHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TT-EADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~-ea~~~l~~rgi~ 182 (262)
..+|+++-|.+. ++++.+....++ ..+++..+-+++ .. +..+.|++.+|.
T Consensus 196 ~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 196 KQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred hcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCcc
Confidence 489999998764 345555556664 557888888875 43 345777777665
No 113
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.55 E-value=0.00038 Score=62.69 Aligned_cols=131 Identities=14% Similarity=0.068 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
++..||+|+|+|++|+..++.|.+ .++++++|+| .|.++..+..++.+-. ..+++.++++. .
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~ 66 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS----------RRLENAQKMAKELAIP------VAYGSYEELCKDE 66 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC----------SSSHHHHHHHHHTTCC------CCBSSHHHHHHCT
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHHHcCCC------ceeCCHHHHhcCC
Confidence 356799999999999999999988 4789999999 5677776666654321 22333556663 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++|+++-|++.. .+.+.+... ...+++|-.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 141 (330)
T 3e9m_A 67 TIDIIYIPTYNQ-GHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQ 141 (330)
T ss_dssp TCSEEEECCCGG-GHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCH-HHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHh
Confidence 899999998755 334443332 445888752222223443 344678988876665544444444555554
No 114
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.55 E-value=0.00025 Score=63.14 Aligned_cols=126 Identities=12% Similarity=0.130 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCCHHHHH-HHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 56 IINSKISIQGFGNVGSV-AANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~-~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
++.+||+|+|+|++|+. .++.|.+ .++++++|+| .|.+++.+..++.+. ..+++.++++.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~~~-------~~~~~~~~ll~- 65 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFT----------PNKVKREKICSDYRI-------MPFDSIESLAK- 65 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEEC----------SCHHHHHHHHHHHTC-------CBCSCHHHHHT-
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEEC----------CCHHHHHHHHHHcCC-------CCcCCHHHHHh-
Confidence 45689999999999996 8888877 5899999999 688887777665542 11333567777
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHH
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFE 200 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E 200 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....+
T Consensus 66 ~~D~V~i~tp~~-~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~ 137 (308)
T 3uuw_A 66 KCDCIFLHSSTE-THYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEIKN 137 (308)
T ss_dssp TCSEEEECCCGG-GHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHH
T ss_pred cCCEEEEeCCcH-hHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHHHHHHHH
Confidence 999999998754 334433332 345777732111123333 444678887765554444443333333
No 115
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.54 E-value=0.00023 Score=62.19 Aligned_cols=102 Identities=13% Similarity=0.173 Sum_probs=65.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
+||+|.|+|++|+.+++.+.+.+..++++.|.... . .. +....++.++++ ++||+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~----------~------~~-------gv~v~~dl~~l~--~~DVv 58 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPK----------A------TT-------PYQQYQHIADVK--GADVA 58 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------------------C-------CSCBCSCTTTCT--TCSEE
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCcc----------c------cC-------CCceeCCHHHHh--CCCEE
Confidence 68999999999999999998875599999886432 0 01 222233345555 89999
Q ss_pred eeCCccCcccccchhcc--CceEEEecCCCCCCHHHHHHHH----HCCCeEeccccc
Q psy14499 139 IPAAIEDQITINNANNV--TAKIILEGANGPTTTEADDILR----DKGIILAPDVIT 189 (262)
Q Consensus 139 ipaa~~~~it~e~a~~~--~~kiIve~AN~p~t~ea~~~l~----~rgi~~iPD~~a 189 (262)
|+++.++... +++. + +..+|++-. .++++-.+.|+ +.++++.|.|..
T Consensus 59 IDft~p~a~~-~~~~-l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~S~ 111 (243)
T 3qy9_A 59 IDFSNPNLLF-PLLD-EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANMSY 111 (243)
T ss_dssp EECSCHHHHH-HHHT-SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSCCH
T ss_pred EEeCChHHHH-HHHH-HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCccH
Confidence 9999776554 3443 4 345666433 35665444443 345666666644
No 116
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.54 E-value=0.00036 Score=63.67 Aligned_cols=106 Identities=13% Similarity=0.096 Sum_probs=73.9
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++.++++.|+|+|++|+.+|+.+..+|++|+ ..|. .. . +. ..+. +.+..+ .++++
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~-~~d~-------~~-~-~~---~~~~--------~~~~~~-l~ell- 192 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYDV-------VK-R-ED---LKEK--------GCVYTS-LDELL- 192 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------SC-C-HH---HHHT--------TCEECC-HHHHH-
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceee-ecCC-------cc-c-hh---hhhc--------CceecC-HHHHH-
Confidence 356889999999999999999999999999998 4342 21 1 11 1111 122233 56677
Q ss_pred cCceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-CHH-HHHHHHHCCC
Q psy14499 133 IPCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-TTE-ADDILRDKGI 181 (262)
Q Consensus 133 ~~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t~e-a~~~l~~rgi 181 (262)
..|||++-+.+. +.|+.+....++ .-+++.-+-+++ ..+ ..+.|++.-|
T Consensus 193 ~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i 249 (334)
T 3kb6_A 193 KESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKF 249 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCE
T ss_pred hhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCc
Confidence 479999877653 677778888885 558999999997 444 4577766544
No 117
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.53 E-value=0.00028 Score=66.14 Aligned_cols=116 Identities=16% Similarity=0.206 Sum_probs=70.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-----CC-------cee
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-----NE-------GEK 123 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-----~~-------~~~ 123 (262)
+.+.+|+|+|+|.+|..+++.+..+|++|+ ++| .++.++....+....+... .+ .+.
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D----------~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e 256 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVS-ATD----------VRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKE 256 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSTTHHHHHHHTTCEECCCCC---------------
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHcCCceeecccccccccccccchhhh
Confidence 578999999999999999999999999877 778 4444444433321111100 00 000
Q ss_pred cCC---------CccccccCceEEeeCCc------cCcccccchhccC-ceEEEecC-----CCCCCHHHHHHHHHCCCe
Q psy14499 124 IND---------SKEFWSIPCDILIPAAI------EDQITINNANNVT-AKIILEGA-----NGPTTTEADDILRDKGII 182 (262)
Q Consensus 124 ~~~---------~~~il~~~~DIlipaa~------~~~it~e~a~~~~-~kiIve~A-----N~p~t~ea~~~l~~rgi~ 182 (262)
+++ ..+.+ .++||+|.|.. ..++|.+.+.+++ ..+|++-| |-.+|.. ...+..+||.
T Consensus 257 ~s~~~~~~~~~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~-~~~~~~~GV~ 334 (405)
T 4dio_A 257 MSGEYQVKQAALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEA-GKVTEVGGVR 334 (405)
T ss_dssp --CHHHHHHHHHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCT-TEEEEETTEE
T ss_pred cchhhhhhhHhHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCC-CCeEEECCEE
Confidence 110 11122 58999998842 3678999999985 55888776 3333311 1123457777
Q ss_pred Ee
Q psy14499 183 LA 184 (262)
Q Consensus 183 ~i 184 (262)
++
T Consensus 335 ~~ 336 (405)
T 4dio_A 335 IV 336 (405)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 118
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.53 E-value=0.00072 Score=60.85 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHH-H-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 56 IINSKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~-~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
.+..+|+|+|+|++|+..++.|. + .++++++|+| .|.+++.+..++.+. ...+++.++++.
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d----------~~~~~~~~~a~~~g~------~~~~~~~~~~l~~ 69 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA----------LDSNQLEWAKNELGV------ETTYTNYKDMIDT 69 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC----------SCHHHHHHHHHTTCC------SEEESCHHHHHTT
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec----------CCHHHHHHHHHHhCC------CcccCCHHHHhcC
Confidence 35579999999999999999988 5 4889999999 677777666655431 123333456664
Q ss_pred cCceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHHH---HHHC-CCeEeccccccchhhHHHHHHHH
Q psy14499 133 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADDI---LRDK-GIILAPDVITNAGGVIVSYFEWV 202 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~~---l~~r-gi~~iPD~~aN~GGvi~s~~E~~ 202 (262)
.++|+++-|++.. .+.+.+... ...+++|- |+ + .+++++ .+++ |+.+...+..---..+....+++
T Consensus 70 ~~~D~V~i~tp~~-~h~~~~~~al~~G~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i 145 (346)
T 3cea_A 70 ENIDAIFIVAPTP-FHPEMTIYAMNAGLNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIV 145 (346)
T ss_dssp SCCSEEEECSCGG-GHHHHHHHHHHTTCEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHH
T ss_pred CCCCEEEEeCChH-hHHHHHHHHHHCCCEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHH
Confidence 4799999998754 333443332 33466653 43 3 344333 3567 88776544333333333444544
Q ss_pred h
Q psy14499 203 Q 203 (262)
Q Consensus 203 ~ 203 (262)
+
T Consensus 146 ~ 146 (346)
T 3cea_A 146 D 146 (346)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.52 E-value=0.00059 Score=61.60 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=82.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 135 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~ 135 (262)
..||+|+|+|++|+..++.|.+. ++++++|+| .|.+++.+..++.+ ...+++.++++. .++
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIAD----------PFIEGAQRLAEANG-------AEAVASPDEVFARDDI 66 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHTTT-------CEEESSHHHHTTCSCC
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC----------CCHHHHHHHHHHcC-------CceeCCHHHHhcCCCC
Confidence 36899999999999999999885 899999999 68887777666543 233443556664 589
Q ss_pred eEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 136 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
|+++-|++.. .+.+.+... ...+++|-.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 D~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (344)
T 3euw_A 67 DGIVIGSPTS-THVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVA 139 (344)
T ss_dssp CEEEECSCGG-GHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHH
T ss_pred CEEEEeCCch-hhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHh
Confidence 9999998754 333433332 445777752111123443 334667877765555444444444455544
No 120
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.52 E-value=0.00019 Score=68.44 Aligned_cols=177 Identities=11% Similarity=0.126 Sum_probs=103.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc--Cce
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI--PCD 136 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~--~~D 136 (262)
++|.|+|.|++|+.++..|.+.|..|+ +.| .+.+++.+..++.+....-.+....++.+++... ++|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~-v~d----------r~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aD 70 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVA-VFN----------RTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPR 70 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCC
Confidence 479999999999999999999999876 767 4677766666543311000011222223444432 699
Q ss_pred EEeeCCccCcccccchhc----c-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH-------------H
Q psy14499 137 ILIPAAIEDQITINNANN----V-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI-------------V 196 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~----~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi-------------~ 196 (262)
+++-|.+...-..+.+.+ + ..++|+...|+.. +.+..+.+.++|+.+++-. .+||.. .
T Consensus 71 vVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p--v~gg~~~a~~g~~i~~gg~~ 148 (478)
T 1pgj_A 71 KALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG--ISGGEEGARKGPAFFPGGTL 148 (478)
T ss_dssp EEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE--EESHHHHHHHCCEEEEEECH
T ss_pred EEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee--ccCCHHHHhcCCeEeccCCH
Confidence 999998875333333332 3 3568999999864 3445567777888776322 223221 1
Q ss_pred HHHHHHh----hhcC--------CCCC----HHH----HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Q psy14499 197 SYFEWVQ----NLSN--------LLWT----EQE----INLRLNNIICNAFDAIWELANTKKVSLRTAAFII 248 (262)
Q Consensus 197 s~~E~~~----~~~~--------~~~~----~~~----v~~~l~~~~~~~~~~v~~~a~~~~~~~r~aa~~~ 248 (262)
..++.++ .... ..|- ... +...+...+...+.+.+..+++.|+++.+.....
T Consensus 149 ~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 149 SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 1222222 1111 1221 111 1223444445677888888889999987755544
No 121
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.51 E-value=0.00022 Score=56.24 Aligned_cols=106 Identities=12% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc----c
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS----I 133 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~----~ 133 (262)
..+|+|+|+|.+|+.+++.|.+.|..|+ +.| .|++.+.++.+..-.+ -+.+. + ..+.+. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~-vid----------~~~~~~~~~~~~g~~~-i~gd~---~-~~~~l~~a~i~ 70 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLV-VIE----------TSRTRVDELRERGVRA-VLGNA---A-NEEIMQLAHLE 70 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHTTCEE-EESCT---T-SHHHHHHTTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHHcCCCE-EECCC---C-CHHHHHhcCcc
Confidence 3589999999999999999999999998 666 5787776665431110 00011 1 122221 3
Q ss_pred CceEEeeCCccCcccc---cchhcc--CceEEEecCCCCCCHHHHHHHHHCCCeE
Q psy14499 134 PCDILIPAAIEDQITI---NNANNV--TAKIILEGANGPTTTEADDILRDKGIIL 183 (262)
Q Consensus 134 ~~DIlipaa~~~~it~---e~a~~~--~~kiIve~AN~p~t~ea~~~l~~rgi~~ 183 (262)
++|++|-|...+..+. ..++++ ..++|+-.. +++-.+.|++.|+..
T Consensus 71 ~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~----~~~~~~~l~~~G~d~ 121 (140)
T 3fwz_A 71 CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAH----YDDEVAYITERGANQ 121 (140)
T ss_dssp GCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES----SHHHHHHHHHTTCSE
T ss_pred cCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEEC----CHHHHHHHHHCCCCE
Confidence 7999999887655443 334444 456666442 456678888898753
No 122
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.51 E-value=0.00021 Score=65.10 Aligned_cols=105 Identities=18% Similarity=0.244 Sum_probs=71.9
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|++.. +. + ++ . ....+ .++++ .
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~~~---~~-~---------~~-~-------~~~~~-l~ell-~ 197 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVI-GEDVFEI---KG-I---------ED-Y-------CTQVS-LDEVL-E 197 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSSCC---CS-C---------TT-T-------CEECC-HHHHH-H
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECCCcc---HH-H---------Hh-c-------cccCC-HHHHH-h
Confidence 46889999999999999999999999999987 5553210 00 0 00 0 11112 44555 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
++|+++.|.+. ++++.+....++ ..+++.-+-+++ . .+..+.|++.+|.
T Consensus 198 ~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 198 KSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp HCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCce
Confidence 89999988654 556666666664 568888888876 3 4446888887765
No 123
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.48 E-value=0.00081 Score=60.98 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=81.6
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHH--------CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFK--------AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIND 126 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~--------~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~ 126 (262)
+|+..||+|+|+|.+|+.-++.+.. .++++++|+| .|.++..+..++.+- ...++|
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~g~------~~~y~d 85 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE----------ANAGLAEARAGEFGF------EKATAD 85 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC----------C--TTHHHHHHHHTC------SEEESC
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC----------CCHHHHHHHHHHhCC------CeecCC
Confidence 4788999999999999977665543 3789999999 577777676666542 233444
Q ss_pred Ccccc-ccCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHHH---HHCCCeEeccccccchhhHHHHH
Q psy14499 127 SKEFW-SIPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDIL---RDKGIILAPDVITNAGGVIVSYF 199 (262)
Q Consensus 127 ~~~il-~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~l---~~rgi~~iPD~~aN~GGvi~s~~ 199 (262)
.++++ +.+.|+++=|++. ..+.+.+... ...++||=.=.....|+++++ +++|+.+...+.----..+....
T Consensus 86 ~~ell~~~~iDaV~IatP~-~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k 164 (393)
T 4fb5_A 86 WRALIADPEVDVVSVTTPN-QFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIR 164 (393)
T ss_dssp HHHHHHCTTCCEEEECSCG-GGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHH
T ss_pred HHHHhcCCCCcEEEECCCh-HHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHH
Confidence 56676 3578999998864 3455544443 445777754333345555444 67888776555544444444444
Q ss_pred HHHh
Q psy14499 200 EWVQ 203 (262)
Q Consensus 200 E~~~ 203 (262)
++++
T Consensus 165 ~~i~ 168 (393)
T 4fb5_A 165 KLVG 168 (393)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 124
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.48 E-value=0.00067 Score=61.68 Aligned_cols=130 Identities=9% Similarity=0.115 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCHHHH-HHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 56 IINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~-~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
++..||+|+|+|.+|+ ..++.|.+. ++++++|+| .|.++..+..++.+ ...+++.++++.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~~ll~~ 87 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIAS----------RRWDRAKRFTERFG-------GEPVEGYPALLER 87 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEE----------SSHHHHHHHHHHHC-------SEEEESHHHHHTC
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEc----------CCHHHHHHHHHHcC-------CCCcCCHHHHhcC
Confidence 4568999999999998 788888876 899999999 57777777666543 222333566764
Q ss_pred cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 133 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
.++|+++-|++.. .+.+.+... ...+++|=.=.....|++ +..+++|+.+...+.----..+....++++
T Consensus 88 ~~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 163 (350)
T 3rc1_A 88 DDVDAVYVPLPAV-LHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLD 163 (350)
T ss_dssp TTCSEEEECCCGG-GHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHH
T ss_pred CCCCEEEECCCcH-HHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHh
Confidence 5799999998754 344444432 445888852222224444 344678988876554444444444445544
No 125
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.46 E-value=0.0003 Score=67.13 Aligned_cols=173 Identities=15% Similarity=0.156 Sum_probs=102.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH-hcCCccCCCCceecCCCccccc--cCc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWS--IPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~-~~g~~~~~~~~~~~~~~~~il~--~~~ 135 (262)
++|.|+|+|++|+.++..|.+.|.+|+ +.| .+.+++.++.+ +.. + .+....++.+++.. .++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~-v~d----------r~~~~~~~l~~~~~~---g-~gi~~~~~~~e~v~~l~~a 67 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVC-AFN----------RTVSKVDDFLANEAK---G-TKVLGAHSLEEMVSKLKKP 67 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSTHHHHHHHHTTTT---T-SSCEECSSHHHHHHHBCSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHhcccc---C-CCeEEeCCHHHHHhhccCC
Confidence 579999999999999999999999876 766 45666666554 210 0 12222222444443 389
Q ss_pred eEEeeCCccCcccccchh----cc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhHH------------
Q psy14499 136 DILIPAAIEDQITINNAN----NV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVIV------------ 196 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~----~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi~------------ 196 (262)
|+++-|.+......+.+. .+ ..++|+...|+.. +.+..+.+.++|+.++.- .++|+...
T Consensus 68 DvVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~--pv~g~~~~a~~g~~i~~gg~ 145 (482)
T 2pgd_A 68 RRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGS--GVSGGEDGARYGPSLMPGGN 145 (482)
T ss_dssp CEEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE--EEESHHHHHHHCCEEEEEEC
T ss_pred CEEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCC--CCCCChhhhccCCeEEeCCC
Confidence 999999887533333333 23 3569999999865 334556777889887732 22333221
Q ss_pred -HHHH----HHhhhcC-C-------CCC----HH----HHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHH
Q psy14499 197 -SYFE----WVQNLSN-L-------LWT----EQ----EINLRLNNIICNAFDAIWELANTK-KVSLRTAAFII 248 (262)
Q Consensus 197 -s~~E----~~~~~~~-~-------~~~----~~----~v~~~l~~~~~~~~~~v~~~a~~~-~~~~r~aa~~~ 248 (262)
..++ +++.... . .+- .. -+...+...+...+.+.+..+++. |+++.+...+.
T Consensus 146 ~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~ 219 (482)
T 2pgd_A 146 KEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAF 219 (482)
T ss_dssp TTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 1112 2222111 1 121 11 122334444557778888888888 99987765554
No 126
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.46 E-value=0.00066 Score=61.60 Aligned_cols=128 Identities=10% Similarity=0.064 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
+..||+|+|+|++|+..++.|.+. ++++++|+| .|.+++.+..++.+ ...+++.++++. .
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCD----------IDPAALKAAVERTG-------ARGHASLTDMLAQT 74 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC----------SSHHHHHHHHHHHC-------CEEESCHHHHHHHC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc----------CCHHHHHHHHHHcC-------CceeCCHHHHhcCC
Confidence 457999999999999999999886 899999999 68888777766554 233443566764 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHH
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWV 202 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~ 202 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+-----..+....+++
T Consensus 75 ~~D~V~i~tp~~-~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 148 (354)
T 3q2i_A 75 DADIVILTTPSG-LHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAM 148 (354)
T ss_dssp CCSEEEECSCGG-GHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH
T ss_pred CCCEEEECCCcH-HHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHH
Confidence 899999998754 334433332 445777742111123343 34467788776444433333333334444
No 127
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.45 E-value=6.6e-05 Score=68.62 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC---------CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA---------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 128 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~---------g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~ 128 (262)
..+|+|+|+|+||+.+++.|.+. +.++++|+|++ ...+.+++ .....+|.+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~~~------------------~~~~~~d~~ 62 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRAIP------------------QELLRAEPF 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCSSC------------------GGGEESSCC
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhccC------------------cccccCCHH
Confidence 46899999999999999999875 57999999964 11222332 112233356
Q ss_pred cccccCceEEeeCCccCcccccchhc-c-CceEEEecCCCCCCHHH
Q psy14499 129 EFWSIPCDILIPAAIEDQITINNANN-V-TAKIILEGANGPTTTEA 172 (262)
Q Consensus 129 ~il~~~~DIlipaa~~~~it~e~a~~-~-~~kiIve~AN~p~t~ea 172 (262)
+++ +.||+++|+.......+.+.+ + ..|.|+-+...|++.++
T Consensus 63 ~ll--~iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~ 106 (332)
T 2ejw_A 63 DLL--EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAW 106 (332)
T ss_dssp CCT--TCSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSH
T ss_pred HHh--CCCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHH
Confidence 777 999999998755333444432 3 45555554444554333
No 128
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.44 E-value=0.00074 Score=62.76 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-------CC-ceec---
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-------NE-GEKI--- 124 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-------~~-~~~~--- 124 (262)
+.+.+|+|+|+|.+|..+++.+..+|++|+ +.| .++.++....+....+... .+ .+.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~-v~D----------~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTT-GYD----------VRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEE-EEC----------SSGGGHHHHHHTTCEECCCC-------------CHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHcCCeEEeccccccccccchhhhhHH
Confidence 478999999999999999999999999977 778 3444443333321111110 00 0000
Q ss_pred ---C---CCccccccCceEEeeCCc------cCcccccchhccC-ceEEEecC-----CCCCCHHHHHHHHHCCCeEe
Q psy14499 125 ---N---DSKEFWSIPCDILIPAAI------EDQITINNANNVT-AKIILEGA-----NGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 125 ---~---~~~~il~~~~DIlipaa~------~~~it~e~a~~~~-~kiIve~A-----N~p~t~ea~~~l~~rgi~~i 184 (262)
. +..+.+ .++||+|-|.. +.++|.+.+.+++ ..+|++-| |-.+|. .......+||.++
T Consensus 251 ~~~~~~~~l~e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~-~~~~~~~~gV~~~ 326 (381)
T 3p2y_A 251 ERAQQQQALEDAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTE-PGRTIVHHGVTIT 326 (381)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCC-TTCEEEETTEEEE
T ss_pred HHhhhHHHHHHHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcccccc-CCCeEEECCEEEE
Confidence 0 011222 58999998741 2578999999884 55777665 333331 1122456777664
No 129
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.44 E-value=0.0003 Score=61.94 Aligned_cols=106 Identities=19% Similarity=0.327 Sum_probs=70.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|+|+|+|++|+.+++.|.+.|.+|+ +.| .+.+++.++.+. + ....++.++.+ .++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~D~v 65 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLV-VSD----------RNPEAIADVIAA-G-------AETASTAKAIA-EQCDVI 65 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHT-T-------CEECSSHHHHH-HHCSEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHC-C-------CeecCCHHHHH-hCCCEE
Confidence 589999999999999999999999875 777 466666655543 1 22222233444 379999
Q ss_pred eeCCccCcccccc-------hhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEe
Q psy14499 139 IPAAIEDQITINN-------ANNV-TAKIILEGANGPT--TTEADDILRDKGIILA 184 (262)
Q Consensus 139 ipaa~~~~it~e~-------a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~i 184 (262)
+.|.+......+. .+.+ +.++|+.-+|+.. +.+..+.+.++|+.++
T Consensus 66 i~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 66 ITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred EEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 9998743222222 2233 3568888888764 2445566777888776
No 130
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.0003 Score=67.56 Aligned_cols=175 Identities=11% Similarity=0.142 Sum_probs=104.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH-hcCCccCCCCceecCCCccccc--c
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWS--I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~-~~g~~~~~~~~~~~~~~~~il~--~ 133 (262)
...+|.|+|.|++|+.+|..|.+.|.+|+ +.| .+.+++.++.+ +.+ + .+....+++.++.. .
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~-v~d----------r~~~~~~~l~~~~~~---~-~gi~~~~s~~e~v~~l~ 73 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVC-AYN----------RTQSKVDHFLANEAK---G-KSIIGATSIEDFISKLK 73 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SSSHHHHHHHHTTTT---T-SSEECCSSHHHHHHTSC
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHccccc---C-CCeEEeCCHHHHHhcCC
Confidence 34689999999999999999999999876 767 46677666655 211 0 11222222334442 1
Q ss_pred CceEEeeCCccCcccccch----hcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEeccccccchhhH-----------
Q psy14499 134 PCDILIPAAIEDQITINNA----NNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVITNAGGVI----------- 195 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a----~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~aN~GGvi----------- 195 (262)
++|++|-|-+.+....+.+ +.+ +.++|+...|... +.+..+.+.++|+.+++-.+. ||..
T Consensus 74 ~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVs--gg~~~a~~G~~im~g 151 (497)
T 2p4q_A 74 RPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVS--GGEEGARYGPSLMPG 151 (497)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE--SHHHHHHHCCEEEEE
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcc--cChhHhhcCCeEEec
Confidence 4999999987753333333 333 3579999999864 344556788889988733322 3321
Q ss_pred --HHHHHH----HhhhcC-------CCCC----HHH----HHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHH
Q psy14499 196 --VSYFEW----VQNLSN-------LLWT----EQE----INLRLNNIICNAFDAIWELANT-KKVSLRTAAFII 248 (262)
Q Consensus 196 --~s~~E~----~~~~~~-------~~~~----~~~----v~~~l~~~~~~~~~~v~~~a~~-~~~~~r~aa~~~ 248 (262)
-..++. ++.... ..|- .-. +...+...+...+.+.+..+++ .|+++.+...+.
T Consensus 152 g~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 152 GSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp ECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 111222 222111 1221 111 2333444556777888888898 599987766554
No 131
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.42 E-value=0.0011 Score=59.71 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=71.9
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 33 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 33 ~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
-.+.|..|+ .+++++.+.++.|++++|+|.|+ ||+.+|++|...|++|+ |++++- -|
T Consensus 144 ~~PcTp~gi----~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~t-------~~---------- 201 (301)
T 1a4i_A 144 FIPCTPKGC----LELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVT-TCHSKT-------AH---------- 201 (301)
T ss_dssp CCCHHHHHH----HHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-------SS----------
T ss_pred ccCchHHHH----HHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEE-EEECCc-------cc----------
Confidence 456898885 55677789999999999999996 89999999999999977 887320 01
Q ss_pred cCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCCC
Q psy14499 112 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 168 (262)
Q Consensus 112 ~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p~ 168 (262)
..+.+ ..+||+|-+.. .+.++.+.++ ..-+|++-+-.+.
T Consensus 202 ---------------L~~~~-~~ADIVI~Avg~p~~I~~~~vk--~GavVIDVgi~~~ 241 (301)
T 1a4i_A 202 ---------------LDEEV-NKGDILVVATGQPEMVKGEWIK--PGAIVIDCGINYV 241 (301)
T ss_dssp ---------------HHHHH-TTCSEEEECCCCTTCBCGGGSC--TTCEEEECCCBC-
T ss_pred ---------------HHHHh-ccCCEEEECCCCcccCCHHHcC--CCcEEEEccCCCc
Confidence 11222 48899999876 4688888765 3457787777665
No 132
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.39 E-value=0.0027 Score=59.39 Aligned_cols=149 Identities=17% Similarity=0.217 Sum_probs=88.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc-c---c
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-S---I 133 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~---~ 133 (262)
+.+|+|+|+|.+|+.+++.|.+.|..|+ |.| .|++.+.++.+. |.-.-+-+++ ..++| . .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vv-vId----------~d~~~v~~~~~~-g~~vi~GDat----~~~~L~~agi~ 67 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMV-VLD----------HDPDHIETLRKF-GMKVFYGDAT----RMDLLESAGAA 67 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------CCHHHHHHHHHT-TCCCEESCTT----CHHHHHHTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHhC-CCeEEEcCCC----CHHHHHhcCCC
Confidence 4679999999999999999999999998 777 688887766543 2100011111 12233 1 4
Q ss_pred CceEEeeCCccCcccc---cchhccC--ceEEEecCCCCCCHHHHHHHHHCCCeE--eccccccchhhHHHHHHHHhhhc
Q psy14499 134 PCDILIPAAIEDQITI---NNANNVT--AKIILEGANGPTTTEADDILRDKGIIL--APDVITNAGGVIVSYFEWVQNLS 206 (262)
Q Consensus 134 ~~DIlipaa~~~~it~---e~a~~~~--~kiIve~AN~p~t~ea~~~l~~rgi~~--iPD~~aN~GGvi~s~~E~~~~~~ 206 (262)
++|++|-|...+..+. ..++++. .++|+-..| ++-...|.+.|+.. -|.+.+ +--+.... +..
T Consensus 68 ~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~----~~~~~~L~~~Gad~Vi~~~~~~-a~~la~~~---L~~-- 137 (413)
T 3l9w_A 68 KAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARD----VDHYIRLRQAGVEKPERETFEG-ALKTGRLA---LES-- 137 (413)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESS----HHHHHHHHHTTCSSCEETTHHH-HHHHHHHH---HHH--
T ss_pred ccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECC----HHHHHHHHHCCCCEEECccHHH-HHHHHHHH---HHH--
Confidence 7999999887644443 3444443 467775544 56677888888753 233322 11111112 221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy14499 207 NLLWTEQEINLRLNNIICNAFDAIWEL 233 (262)
Q Consensus 207 ~~~~~~~~v~~~l~~~~~~~~~~v~~~ 233 (262)
+..+++++.+.++..-...++.+.+.
T Consensus 138 -lg~~~~~~~~~~~~~r~~~~~~~~~~ 163 (413)
T 3l9w_A 138 -LGLGPYEARERADVFRRFNIQMVEEM 163 (413)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHHhHHHHHHHH
Confidence 23567777776666544434433333
No 133
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.39 E-value=0.0012 Score=60.26 Aligned_cols=113 Identities=14% Similarity=0.119 Sum_probs=72.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
++..||+|+|+|.+|+..++.|.+. ++++++|+| .|.+++.. .++.+ ...+++.++++. .
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d----------~~~~~~~~-a~~~g-------~~~~~~~~~ll~~~ 64 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFD----------ILAEKREA-AAQKG-------LKIYESYEAVLADE 64 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC----------SSHHHHHH-HHTTT-------CCBCSCHHHHHHCT
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc----------CCHHHHHH-HHhcC-------CceeCCHHHHhcCC
Confidence 4568999999999999999988876 899999999 57776542 23222 223343566663 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccc
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDV 187 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~ 187 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+
T Consensus 65 ~~D~V~i~tp~~-~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (359)
T 3e18_A 65 KVDAVLIATPND-SHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ 123 (359)
T ss_dssp TCCEEEECSCGG-GHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCCEEEEcCCcH-HHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 899999998753 344444332 445778742212223444 33367788765433
No 134
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.37 E-value=0.00018 Score=68.18 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=89.3
Q ss_pred HHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhc-CC---cc-----
Q psy14499 47 KIASKINLNIINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT-RS---IK----- 116 (262)
Q Consensus 47 ~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~-g~---~~----- 116 (262)
..|+.+...-+..||.|+|+|.+|+..++.+.+ .++++++|+| .|+++..+..++. |. +.
T Consensus 12 ~~l~~r~~~~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D----------~~~era~~~a~~~yG~~~~~~~~~~~ 81 (446)
T 3upl_A 12 RDLAARAETGKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSA----------RRLPNTFKAIRTAYGDEENAREATTE 81 (446)
T ss_dssp HHHHHHHHTTCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC----------SSTHHHHHHHHHHHSSSTTEEECSSH
T ss_pred HHHHHHHhcCCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEe----------CCHHHHHHHHHHhcCCccccccccch
Confidence 344433333366899999999999999988866 4899999999 6787776665543 31 00
Q ss_pred -CC------CCceecCCCccccc-cCceEEeeCCccCcccccchhc-c-CceEEEecCCCCCC----HHHHHHHHHCCCe
Q psy14499 117 -DF------NEGEKINDSKEFWS-IPCDILIPAAIEDQITINNANN-V-TAKIILEGANGPTT----TEADDILRDKGII 182 (262)
Q Consensus 117 -~~------~~~~~~~~~~~il~-~~~DIlipaa~~~~it~e~a~~-~-~~kiIve~AN~p~t----~ea~~~l~~rgi~ 182 (262)
.. .....++|.++++. -++|+++.|++......+.+.. + ..|.|+- .|-+++ ++..+.-+++|+.
T Consensus 82 ~~i~~a~~~g~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~-~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 82 SAMTRAIEAGKIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVM-MNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp HHHHHHHHTTCEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEE-CCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhhhhhccCCceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEe-cCcccCHHHHHHHHHHHHHhCCe
Confidence 00 01223444566774 4799999999753333333333 2 3455552 244553 3334445778998
Q ss_pred EeccccccchhhHHHHHHHHh
Q psy14499 183 LAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 183 ~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+.+.+-.. -+.++-.++|.+
T Consensus 161 l~~~~gdq-p~~~~eLv~~a~ 180 (446)
T 3upl_A 161 YSLGAGDE-PSSCMELIEFVS 180 (446)
T ss_dssp EEECTTSH-HHHHHHHHHHHH
T ss_pred eeecCCcc-hHHHHHHHHHHH
Confidence 87655333 355667778877
No 135
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.37 E-value=0.00058 Score=59.00 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=67.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|..|. ++| .+.+++.++.++.+ ....++.++++ .++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~-~~~----------~~~~~~~~~~~~~g-------~~~~~~~~~~~-~~~D~V 64 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELI-ISG----------SSLERSKEIAEQLA-------LPYAMSHQDLI-DQVDLV 64 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEE-EEC----------SSHHHHHHHHHHHT-------CCBCSSHHHHH-HTCSEE
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEE-EEC----------CCHHHHHHHHHHcC-------CEeeCCHHHHH-hcCCEE
Confidence 589999999999999999999997654 777 46777666654433 11122233444 389999
Q ss_pred eeCCccCcccccchhcc-CceEEEecCCCCCCHHHHHHHHHCCCeE
Q psy14499 139 IPAAIEDQITINNANNV-TAKIILEGANGPTTTEADDILRDKGIIL 183 (262)
Q Consensus 139 ipaa~~~~it~e~a~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~~ 183 (262)
+-|.+.. ...+.+..+ +.++|++-.++....+..+.+ .++..+
T Consensus 65 i~~v~~~-~~~~v~~~l~~~~~vv~~~~~~~~~~l~~~~-~~~~~~ 108 (259)
T 2ahr_A 65 ILGIKPQ-LFETVLKPLHFKQPIISMAAGISLQRLATFV-GQDLPL 108 (259)
T ss_dssp EECSCGG-GHHHHHTTSCCCSCEEECCTTCCHHHHHHHH-CTTSCE
T ss_pred EEEeCcH-hHHHHHHHhccCCEEEEeCCCCCHHHHHHhc-CCCCCE
Confidence 9999844 334444445 345888887765433444444 345333
No 136
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.37 E-value=0.00086 Score=57.88 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=62.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g-~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
++|.|+|.|++|+.+++.|.+.| ..|+ +.| .+.+++.++.++.+ ....++..+.+ ++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~-~~~----------r~~~~~~~~~~~~g-------~~~~~~~~~~~--~~D~ 60 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIY-IAN----------RGAEKRERLEKELG-------VETSATLPELH--SDDV 60 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEE-EEC----------SSHHHHHHHHHHTC-------CEEESSCCCCC--TTSE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEE-EEC----------CCHHHHHHHHHhcC-------CEEeCCHHHHh--cCCE
Confidence 47999999999999999999999 8865 777 46676666655422 22222244555 8999
Q ss_pred EeeCCccCcccccchhcc--CceEEEecCCCCCCHHHHHHH
Q psy14499 138 LIPAAIEDQITINNANNV--TAKIILEGANGPTTTEADDIL 176 (262)
Q Consensus 138 lipaa~~~~it~e~a~~~--~~kiIve~AN~p~t~ea~~~l 176 (262)
++.|.+... ..+....+ +.++|+.-+|+-...+..+.+
T Consensus 61 vi~~v~~~~-~~~v~~~l~~~~~ivv~~~~g~~~~~l~~~~ 100 (263)
T 1yqg_A 61 LILAVKPQD-MEAACKNIRTNGALVLSVAAGLSVGTLSRYL 100 (263)
T ss_dssp EEECSCHHH-HHHHHTTCCCTTCEEEECCTTCCHHHHHHHT
T ss_pred EEEEeCchh-HHHHHHHhccCCCEEEEecCCCCHHHHHHHc
Confidence 999987432 23333333 246888876654333333433
No 137
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.35 E-value=0.0013 Score=59.28 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=83.4
Q ss_pred CeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCc
Q psy14499 59 SKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~ 135 (262)
+||.|+|+|.+|+. .+..|.+. ++++++|+| .|+++..+..++.+- ...++|.++++. .++
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~g~------~~~y~d~~ell~~~~i 87 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS----------RDLTRAREMADRFSV------PHAFGSYEEMLASDVI 87 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC----------SSHHHHHHHHHHHTC------SEEESSHHHHHHCSSC
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC----------CCHHHHHHHHHHcCC------CeeeCCHHHHhcCCCC
Confidence 69999999999975 57777764 899999999 688888887776542 123444567764 578
Q ss_pred eEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 136 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
|+++=|++.. .+.+.+... ...++||=.=.....|++++ .+++|+.+...+.----..+....++++
T Consensus 88 DaV~I~tP~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~ 160 (350)
T 4had_A 88 DAVYIPLPTS-QHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLID 160 (350)
T ss_dssp SEEEECSCGG-GHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CEEEEeCCCc-hhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhh
Confidence 9999988743 444444432 44577775433333555444 3667887776655544444444445544
No 138
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.34 E-value=0.00075 Score=60.73 Aligned_cols=116 Identities=11% Similarity=0.053 Sum_probs=70.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CEEEEEeCCCceeeCCCCCC-HHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFN-IPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g-~~vv~V~D~~G~i~~~~GlD-~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
.++|.|+|+|++|..+++.|.+.| .+|+ +.|.+ ++-.+ .++..+...+.| . .-.+..++. .+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~-~~dr~-----~~~~~~~~~~~~~~~~~g-------~-~~~s~~e~~-~~a 88 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLA-AYDLR-----FNDPAASGALRARAAELG-------V-EPLDDVAGI-ACA 88 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEE-EECGG-----GGCTTTHHHHHHHHHHTT-------C-EEESSGGGG-GGC
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEE-EEeCC-----CccccchHHHHHHHHHCC-------C-CCCCHHHHH-hcC
Confidence 468999999999999999999999 8887 66631 10011 112222222222 1 110245555 479
Q ss_pred eEEeeCCccCcccc---cchhcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEecccc
Q psy14499 136 DILIPAAIEDQITI---NNANNV-TAKIILEGANGPT--TTEADDILRDKGIILAPDVI 188 (262)
Q Consensus 136 DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iPD~~ 188 (262)
|++|-|-+...... +..+.+ +.++|+..++.+. +.+..+.+.++|+.++...+
T Consensus 89 DvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv 147 (317)
T 4ezb_A 89 DVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAV 147 (317)
T ss_dssp SEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEE
T ss_pred CEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccC
Confidence 99999987654432 122223 3568887776543 34455777889988774433
No 139
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.34 E-value=0.00033 Score=63.79 Aligned_cols=106 Identities=14% Similarity=0.186 Sum_probs=70.9
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++.+++|.|+|+|++|+.+|+.|..+|++|+ +.|.+ .++.. ++ . + +..++.++++ .
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~~----------~~~~~---~~-~-~------~~~~~l~ell-~ 198 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVI-TYDIF----------RNPEL---EK-K-G------YYVDSLDDLY-K 198 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EECSS----------CCHHH---HH-T-T------CBCSCHHHHH-H
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EECCC----------cchhH---Hh-h-C------eecCCHHHHH-h
Confidence 46899999999999999999999999999987 54531 11111 11 1 1 1121144555 4
Q ss_pred CceEEeeCCcc-----CcccccchhccC-ceEEEecCCCCC-C-HHHHHHHHHCCCe
Q psy14499 134 PCDILIPAAIE-----DQITINNANNVT-AKIILEGANGPT-T-TEADDILRDKGII 182 (262)
Q Consensus 134 ~~DIlipaa~~-----~~it~e~a~~~~-~kiIve~AN~p~-t-~ea~~~l~~rgi~ 182 (262)
.+|+++.|.+. ++++.+....++ ..+++.-+-+++ . .+..+.|++..|.
T Consensus 199 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 199 QADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp HCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 89999998764 345555555563 557888888875 4 4446788887665
No 140
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.34 E-value=0.0004 Score=60.69 Aligned_cols=106 Identities=12% Similarity=0.147 Sum_probs=67.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+ |++|+ +.| .+.+++.+..+..- ...+ ..+.+ .++|++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~-~~~----------~~~~~~~~~~~~g~--------~~~~-~~~~~-~~~D~v 59 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTL-VWN----------RTFEKALRHQEEFG--------SEAV-PLERV-AEARVI 59 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEE-EEC----------SSTHHHHHHHHHHC--------CEEC-CGGGG-GGCSEE
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEE-EEe----------CCHHHHHHHHHCCC--------cccC-HHHHH-hCCCEE
Confidence 479999999999999999999 99876 666 35555555544311 1112 23444 389999
Q ss_pred eeCCccCcccccch----hcc-CceEEEecCCCCC-C-HHHHHHHHHCCCeEecc
Q psy14499 139 IPAAIEDQITINNA----NNV-TAKIILEGANGPT-T-TEADDILRDKGIILAPD 186 (262)
Q Consensus 139 ipaa~~~~it~e~a----~~~-~~kiIve~AN~p~-t-~ea~~~l~~rgi~~iPD 186 (262)
+.|.+......+.. +.+ +.++|+...|... + .+..+.+.++|+.+++-
T Consensus 60 i~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~ 114 (289)
T 2cvz_A 60 FTCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA 114 (289)
T ss_dssp EECCSSHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC
T ss_pred EEeCCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 99998654222222 223 3567887777543 2 34456667778877643
No 141
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.32 E-value=0.0014 Score=59.09 Aligned_cols=129 Identities=19% Similarity=0.161 Sum_probs=80.0
Q ss_pred CeEEEEcCCHHHHHHHHHHH-H-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCc
Q psy14499 59 SKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~-~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~ 135 (262)
.||+|+|+|.+|+..++.|. + .++++++|+| .|.+++.+..++.+- ....+++.++++. .++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d----------~~~~~~~~~~~~~g~-----~~~~~~~~~~ll~~~~~ 67 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD----------VNQEAAQKVVEQYQL-----NATVYPNDDSLLADENV 67 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC----------SSHHHHHHHHHHTTC-----CCEEESSHHHHHHCTTC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCC-----CCeeeCCHHHHhcCCCC
Confidence 68999999999999999998 4 5899999999 688887777666431 1233444566764 479
Q ss_pred eEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeE-eccccccchhhHHHHHHHHh
Q psy14499 136 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIIL-APDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~-iPD~~aN~GGvi~s~~E~~~ 203 (262)
|+++-|++.. .+.+.+... ...+++|=.=.....+++++ .+++|+.+ ...+.----..+....++++
T Consensus 68 D~V~i~tp~~-~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~ 141 (344)
T 3mz0_A 68 DAVLVTSWGP-AHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALD 141 (344)
T ss_dssp CEEEECSCGG-GHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CEEEECCCch-hHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHH
Confidence 9999999643 344444433 34577765322223444433 36678755 44443333333333444443
No 142
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.31 E-value=0.001 Score=60.64 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=73.1
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHH-H-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFF-K-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~-~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+++..||+|+|+|.+|+..++.|. + .++++++|+| .|.+++.+..++.+- ....+++.++++.
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~g~-----~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCD----------IVAGRAQAALDKYAI-----EAKDYNDYHDLIN 84 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEEC----------SSTTHHHHHHHHHTC-----CCEEESSHHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEe----------CCHHHHHHHHHHhCC-----CCeeeCCHHHHhc
Confidence 456789999999999999999998 4 5899999999 567776666665431 1233443566764
Q ss_pred -cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeE
Q psy14499 133 -IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIIL 183 (262)
Q Consensus 133 -~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~ 183 (262)
.++|+++-|++.. .+.+.+... ...+++|=.=.....+++++ .+++|+.+
T Consensus 85 ~~~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 85 DKDVEVVIITASNE-AHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp CTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEEEcCCcH-HHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 4799999998653 344444433 44577875222222444433 36678755
No 143
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.30 E-value=0.00018 Score=57.67 Aligned_cols=110 Identities=20% Similarity=0.283 Sum_probs=62.6
Q ss_pred hCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceec----CCC
Q psy14499 52 INLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI----NDS 127 (262)
Q Consensus 52 ~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~----~~~ 127 (262)
+..++.+.+|+|+|+|.+|+.+++.|.+.|.+|+ +.|. |.+.+....++.+ ...+ .+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~-vid~----------~~~~~~~~~~~~g-------~~~~~~d~~~~ 74 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVV-VVDK----------NEYAFHRLNSEFS-------GFTVVGDAAEF 74 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------CGGGGGGSCTTCC-------SEEEESCTTSH
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEE-EEEC----------CHHHHHHHHhcCC-------CcEEEecCCCH
Confidence 4456788999999999999999999999999988 5552 3333222110111 1111 001
Q ss_pred cccc---ccCceEEeeCCccCcccc---cchhcc-CceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 128 KEFW---SIPCDILIPAAIEDQITI---NNANNV-TAKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 128 ~~il---~~~~DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
+.+. -.++|++|.|+.....+. +.++.+ ....|+.-.|++.. .+.|++.|+.
T Consensus 75 ~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~---~~~l~~~G~~ 133 (155)
T 2g1u_A 75 ETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPEK---IKIFEENGIK 133 (155)
T ss_dssp HHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGGG---HHHHHTTTCE
T ss_pred HHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHHH---HHHHHHCCCc
Confidence 1111 136899999987644433 233332 33455555666654 3456777765
No 144
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.30 E-value=0.0019 Score=58.47 Aligned_cols=127 Identities=13% Similarity=0.233 Sum_probs=77.4
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 57 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
+..||+|+|+|.+|+. .++.|.+. ++++++|+| .|+++.. + .+++...+++.++++. .
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d----------~~~~~~~---~------~~~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSS----------SDASKVH---A------DWPAIPVVSDPQMLFNDP 66 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC----------SCHHHHH---T------TCSSCCEESCHHHHHHCS
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEEC----------CCHHHHH---h------hCCCCceECCHHHHhcCC
Confidence 3479999999999996 77877765 899999999 5666543 1 2334444554667774 4
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++|+++-|++. ..+.+.+... ...+++|=.=.....|++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~vD~V~i~tp~-~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (352)
T 3kux_A 67 SIDLIVIPTPN-DTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLA 141 (352)
T ss_dssp SCCEEEECSCT-TTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCEEEEeCCh-HHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHh
Confidence 79999999964 3455544443 344777742111224443 334678887764443333333333344443
No 145
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.30 E-value=0.00039 Score=59.73 Aligned_cols=98 Identities=19% Similarity=0.327 Sum_probs=64.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
+||.|+|+|++|+..++.|.+.|+.+++++|++.. .+ + ..++.++++..++|++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~------~~--~------------------~~~~~~~l~~~~~DvV 54 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE------HE--K------------------MVRGIDEFLQREMDVA 54 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CT--T------------------EESSHHHHTTSCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc------hh--h------------------hcCCHHHHhcCCCCEE
Confidence 48999999999999999999899999999985321 00 0 1222445554589999
Q ss_pred eeCCccCcccccchhcc---CceEEEecCCCCCCHHH----HHHHHHCCCeE
Q psy14499 139 IPAAIEDQITINNANNV---TAKIILEGANGPTTTEA----DDILRDKGIIL 183 (262)
Q Consensus 139 ipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea----~~~l~~rgi~~ 183 (262)
+.|++.. .+.+.+... ...+|++..-.+..+++ .+..+++|+.+
T Consensus 55 v~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 55 VEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp EECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred EECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 9999855 444444332 34567765433334543 34456678764
No 146
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.28 E-value=0.0012 Score=59.58 Aligned_cols=132 Identities=17% Similarity=0.193 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC
Q psy14499 36 ATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS 114 (262)
Q Consensus 36 aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~ 114 (262)
.|++=...+---+.+++.. ...++++|+|.|..|+..++.|.+ .+.+.|.|+| .++++..++.++.+.
T Consensus 104 lt~~RTaa~s~laa~~la~-~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~----------r~~~~a~~la~~~~~ 172 (322)
T 1omo_A 104 TTSLRTGAAGGIAAKYLAR-KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYD----------VREKAAKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHHHHHHHHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEEC----------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC-CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEEC----------CCHHHHHHHHHHHHh
Confidence 4444333322223334443 467899999999999999999887 5677777888 577777666554221
Q ss_pred ccCCCCceecCCCccccccCceEEeeCCccC--cccccchhccCceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 115 IKDFNEGEKINDSKEFWSIPCDILIPAAIED--QITINNANNVTAKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 115 ~~~~~~~~~~~~~~~il~~~~DIlipaa~~~--~it~e~a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
. .. ... .++.++.+ ++||++-|++.. +++.+.. +-.+-++..|+..|-..|....+.+++..|+
T Consensus 173 ~-~~-~~~-~~~~~e~v--~aDvVi~aTp~~~pv~~~~~l-~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 173 R-GI-SAS-VQPAEEAS--RCDVLVTTTPSRKPVVKAEWV-EEGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp T-TC-CEE-ECCHHHHT--SSSEEEECCCCSSCCBCGGGC-CTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred c-Cc-eEE-ECCHHHHh--CCCEEEEeeCCCCceecHHHc-CCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 0 01 122 33244555 799999999853 2222111 1145577788888876666555666665444
No 147
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.27 E-value=0.0013 Score=60.88 Aligned_cols=129 Identities=12% Similarity=0.126 Sum_probs=84.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC---------CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA---------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK 128 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~---------g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~ 128 (262)
..||+|+|+|.+|+.-++.|.+. ++++++|+| .|++++.+..++.+. ...+++.+
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d----------~~~~~a~~~a~~~~~------~~~y~d~~ 89 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD----------QDQAMAERHAAKLGA------EKAYGDWR 89 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC----------SSHHHHHHHHHHHTC------SEEESSHH
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc----------CCHHHHHHHHHHcCC------CeEECCHH
Confidence 37999999999999888887653 579999999 788888887776542 23344456
Q ss_pred cccc-cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHHH---HHCCCeEeccccccchhhHHHHHHH
Q psy14499 129 EFWS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDIL---RDKGIILAPDVITNAGGVIVSYFEW 201 (262)
Q Consensus 129 ~il~-~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~l---~~rgi~~iPD~~aN~GGvi~s~~E~ 201 (262)
+++. .++|+++=|++. ..+.+.+... ...+++|=.=.....|+++++ +++|+.+...+.---...+.-..++
T Consensus 90 ~ll~~~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~ 168 (412)
T 4gqa_A 90 ELVNDPQVDVVDITSPN-HLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQI 168 (412)
T ss_dssp HHHHCTTCCEEEECSCG-GGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCc-HHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHH
Confidence 6764 579999988864 4444444443 444777754444445665444 5678777655544444444444444
Q ss_pred Hh
Q psy14499 202 VQ 203 (262)
Q Consensus 202 ~~ 203 (262)
++
T Consensus 169 i~ 170 (412)
T 4gqa_A 169 IA 170 (412)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 148
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.27 E-value=0.00068 Score=59.46 Aligned_cols=123 Identities=10% Similarity=0.048 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 38 GRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 38 g~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
++|...+++. . ++++ +++|+|.|.+|++++..|.+.|++-|.|++ -+.++..++.++.+
T Consensus 95 ~~G~~~~l~~----~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~n----------R~~~ka~~la~~~~---- 153 (253)
T 3u62_A 95 WVGVVKSLEG----V--EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVN----------RTIERAKALDFPVK---- 153 (253)
T ss_dssp HHHHHHHTTT----C--CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEE----------SCHHHHHTCCSSCE----
T ss_pred HHHHHHHHHh----c--CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEe----------CCHHHHHHHHHHcc----
Confidence 4555555532 2 5688 999999999999999999999983344777 35555444332211
Q ss_pred CCCceecCCCccccccCceEEeeCCccCccc-ccch--hcc-CceEEEecCCCCCCHHHHHHHHHCCCe-Eeccc
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQIT-INNA--NNV-TAKIILEGANGPTTTEADDILRDKGII-LAPDV 187 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~it-~e~a--~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~-~iPD~ 187 (262)
...+++..+.+ .++||+|-|++...-. ..+. ..+ +..+|++-+.+ .|+-.++ .+++|+. ++|..
T Consensus 154 ---~~~~~~~~~~~-~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~-~T~ll~~-A~~~G~~~~~~Gl 222 (253)
T 3u62_A 154 ---IFSLDQLDEVV-KKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF-DTPLVVK-ARKLGVKHIIKGN 222 (253)
T ss_dssp ---EEEGGGHHHHH-HTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS-CCHHHHH-HHHHTCSEEECTH
T ss_pred ---cCCHHHHHhhh-cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC-CcHHHHH-HHHCCCcEEECCH
Confidence 11122112222 4799999988643221 1111 123 35689998888 6665544 3678988 77655
No 149
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.26 E-value=0.00081 Score=59.07 Aligned_cols=109 Identities=21% Similarity=0.173 Sum_probs=68.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
-++|.|+|+|++|+.+++.|.+. +..|+ +.| .+.+.+.+..+ .|.. ....++.++.+ .++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d----------~~~~~~~~~~~-~g~~-----~~~~~~~~~~~-~~a 67 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIV-GYN----------RSDRSRDIALE-RGIV-----DEATADFKVFA-ALA 67 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEE-EEC----------SSHHHHHHHHH-TTSC-----SEEESCTTTTG-GGC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEE-EEc----------CCHHHHHHHHH-cCCc-----ccccCCHHHhh-cCC
Confidence 46899999999999999999887 56766 667 46666555443 2211 01222244444 489
Q ss_pred eEEeeCCccCcccccchh----c-c-CceEEEecCCCCCC--HHHHHHHHHCCCeEec
Q psy14499 136 DILIPAAIEDQITINNAN----N-V-TAKIILEGANGPTT--TEADDILRDKGIILAP 185 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~----~-~-~~kiIve~AN~p~t--~ea~~~l~~rgi~~iP 185 (262)
|+++.|.+...+ .+.+. . + ...+|+..+|.+.. ....+.+.++++.++|
T Consensus 68 DvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~ 124 (290)
T 3b1f_A 68 DVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVG 124 (290)
T ss_dssp SEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred CEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEE
Confidence 999999987554 33222 2 3 24588877776542 3333444444777776
No 150
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.24 E-value=0.00079 Score=60.35 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=69.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCC--HHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFN--IPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD--~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.-++|.|+|+|++|..+++.|.+.|+ .|+ +.| .+ .+......+ .| ....++..+.+ .
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~-~~d----------r~~~~~~~~~~~~-~g-------~~~~~~~~e~~-~ 82 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMA-AYD----------AASAESWRPRAEE-LG-------VSCKASVAEVA-G 82 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEE-EEC----------SSCHHHHHHHHHH-TT-------CEECSCHHHHH-H
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEE-EEc----------CCCCHHHHHHHHH-CC-------CEEeCCHHHHH-h
Confidence 34799999999999999999999999 766 777 33 344333333 22 22222234444 4
Q ss_pred CceEEeeCCccCcccc---cchhcc-CceEEEecCCCCC--CHHHHHHHHHC--CCeEecccc
Q psy14499 134 PCDILIPAAIEDQITI---NNANNV-TAKIILEGANGPT--TTEADDILRDK--GIILAPDVI 188 (262)
Q Consensus 134 ~~DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~r--gi~~iPD~~ 188 (262)
+||++|.|-+...... +..+.+ ..++|+....... +.+..+.+.++ |+.++.-.+
T Consensus 83 ~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv 145 (312)
T 3qsg_A 83 ECDVIFSLVTAQAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAV 145 (312)
T ss_dssp HCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cCCEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccc
Confidence 7999999987654432 122223 3457887765543 33445667777 888764433
No 151
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.23 E-value=0.003 Score=55.18 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=57.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCce
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 136 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~D 136 (262)
+||+|.|+ |.+|+.+++.+.+. ++.++++.|.. -| .++++..++|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~--------~d-------------------------l~~~~~~~~D 47 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG--------DP-------------------------LSLLTDGNTE 47 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT--------CC-------------------------THHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC--------CC-------------------------HHHHhccCCc
Confidence 48999996 99999999998865 99999998842 01 2234434789
Q ss_pred EEeeCCccCcccccchh---ccCceEEEecCCCCCCHHHHHHH
Q psy14499 137 ILIPAAIEDQITINNAN---NVTAKIILEGANGPTTTEADDIL 176 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~---~~~~kiIve~AN~p~t~ea~~~l 176 (262)
|+|+++.+... .+++. +-+..+|++-.. ++++..+.|
T Consensus 48 vvIDfT~p~a~-~~~~~~a~~~g~~~VigTTG--~~~e~~~~l 87 (245)
T 1p9l_A 48 VVIDFTHPDVV-MGNLEFLIDNGIHAVVGTTG--FTAERFQQV 87 (245)
T ss_dssp EEEECSCTTTH-HHHHHHHHHTTCEEEECCCC--CCHHHHHHH
T ss_pred EEEEccChHHH-HHHHHHHHHcCCCEEEcCCC--CCHHHHHHH
Confidence 99999976654 34443 336678887662 676644444
No 152
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.23 E-value=0.016 Score=54.73 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=98.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC-------------ceecC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-------------GEKIN 125 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~-------------~~~~~ 125 (262)
++|+|+|.|.||..+|..|.+.|..|+ +.| .|.+++.++.+..-.+ ..|+ .+..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D----------~~~~~v~~l~~g~~~i-~e~gl~~~l~~~~~~~~l~~t~ 70 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CID----------TDRNKIEQLNSGTIPI-YEPGLEKMIARNVKAGRLRFGT 70 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHTCSCC-CSTTHHHHHHHHHHTTSEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEE----------CCHHHHHHHHcCCCcc-cCCCHHHHHHhhcccCcEEEEC
Confidence 689999999999999999999999988 777 6777766665421111 0111 11112
Q ss_pred CCccccccCceEEeeCCccCcc---------cc----cchhcc-CceEEEecCCCCC--CHHHHHHHHHC----------
Q psy14499 126 DSKEFWSIPCDILIPAAIEDQI---------TI----NNANNV-TAKIILEGANGPT--TTEADDILRDK---------- 179 (262)
Q Consensus 126 ~~~~il~~~~DIlipaa~~~~i---------t~----e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~r---------- 179 (262)
+..+.+ .+||++|-|.++..- -. +.++.+ +.++|+.-...|. +.+..+.++++
T Consensus 71 d~~ea~-~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~ 149 (450)
T 3gg2_A 71 EIEQAV-PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF 149 (450)
T ss_dssp CHHHHG-GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CHHHHH-hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce
Confidence 122333 489999999876531 11 112223 3456666665543 34444555543
Q ss_pred CCeEecccccc--------------chhhHHHHHHHHhhhcCCC------C---CHH--HH----HHHHHHHHHHHHHHH
Q psy14499 180 GIILAPDVITN--------------AGGVIVSYFEWVQNLSNLL------W---TEQ--EI----NLRLNNIICNAFDAI 230 (262)
Q Consensus 180 gi~~iPD~~aN--------------~GGvi~s~~E~~~~~~~~~------~---~~~--~v----~~~l~~~~~~~~~~v 230 (262)
.+..-|.++.. .||---..++.++.+-... + +.. +. ...........++++
T Consensus 150 ~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 229 (450)
T 3gg2_A 150 DIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDV 229 (450)
T ss_dssp EEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23444665432 1222122344444322110 0 111 11 112233344567888
Q ss_pred HHHHhhcCCCHHHHHHHHHH
Q psy14499 231 WELANTKKVSLRTAAFIIGC 250 (262)
Q Consensus 231 ~~~a~~~~~~~r~aa~~~a~ 250 (262)
...+++.|+++.+....+..
T Consensus 230 ~~l~~~~Gid~~~v~~~~~~ 249 (450)
T 3gg2_A 230 ANLCERVGADVSMVRLGIGS 249 (450)
T ss_dssp HHHHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHhCCCHHHHHHHHcC
Confidence 88999999998887766553
No 153
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.22 E-value=0.0015 Score=59.16 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC--------CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKA--------GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIND 126 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~--------g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~ 126 (262)
.|+..||+|+|+|.+|+.-++.|.+. ++++++|+| .|++++.+..++.+- ...++|
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d----------~~~~~a~~~a~~~g~------~~~~~d 66 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG----------RDAEAVRAAAGKLGW------STTETD 66 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC----------SSHHHHHHHHHHHTC------SEEESC
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEc----------CCHHHHHHHHHHcCC------CcccCC
Confidence 35668999999999999877777652 458999999 688888777776542 233443
Q ss_pred Cccccc-cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---H---HHCCCeEeccccccchhhHH
Q psy14499 127 SKEFWS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---L---RDKGIILAPDVITNAGGVIV 196 (262)
Q Consensus 127 ~~~il~-~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l---~~rgi~~iPD~~aN~GGvi~ 196 (262)
.++++. .++|+++=|++. ..+.+.+... ...++||=.=.....|++++ . +++|+.+...+.----..+.
T Consensus 67 ~~~ll~~~~iDaV~I~tP~-~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~ 145 (390)
T 4h3v_A 67 WRTLLERDDVQLVDVCTPG-DSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIA 145 (390)
T ss_dssp HHHHTTCTTCSEEEECSCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHH
T ss_pred HHHHhcCCCCCEEEEeCCh-HHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHH
Confidence 566664 579999998864 3455444442 44578885433344677666 3 33788777666554445444
Q ss_pred HHHHHHh
Q psy14499 197 SYFEWVQ 203 (262)
Q Consensus 197 s~~E~~~ 203 (262)
...++++
T Consensus 146 ~~k~~i~ 152 (390)
T 4h3v_A 146 LARKLVA 152 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555554
No 154
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.20 E-value=0.0028 Score=56.94 Aligned_cols=125 Identities=10% Similarity=0.091 Sum_probs=82.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
.||+|+|+|++|+..++.|.+. ++++++|+| .|.++..+..++.+.- ..+++.++++. .+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d----------~~~~~a~~~a~~~~~~------~~~~~~~~ll~~~~ 66 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAA----------RDLSRAKEFAQKHDIP------KAYGSYEELAKDPN 66 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEEC----------SSHHHHHHHHHHHTCS------CEESSHHHHHHCTT
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEc----------CCHHHHHHHHHHcCCC------cccCCHHHHhcCCC
Confidence 6899999999999999988765 368999999 6788877776665421 22333566764 58
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+|+++-|++.. .+.+.+... ...+++|= |+ + .|++ +..+++|+.+...+..---..+....++++
T Consensus 67 vD~V~i~tp~~-~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~ 140 (334)
T 3ohs_X 67 VEVAYVGTQHP-QHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLA 140 (334)
T ss_dssp CCEEEECCCGG-GHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCEEEECCCcH-HHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHh
Confidence 99999998643 455554443 44588884 44 2 4444 334678888765555444444444455553
No 155
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.20 E-value=0.0012 Score=61.86 Aligned_cols=132 Identities=11% Similarity=0.001 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCHHHH-HHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 56 IINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~-~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
.+..||+|+|+|++|+ ..++.|.+. ++++++|+| .|.++..+..++.+.-. .+...+++.++++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d----------~~~~~~~~~a~~~g~~~--~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVS----------GNAEKAKIVAAEYGVDP--RKIYDYSNFDKIAKD 148 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEEC----------SCHHHHHHHHHHTTCCG--GGEECSSSGGGGGGC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCCCc--ccccccCCHHHHhcC
Confidence 3567999999999997 788888764 689999999 67777766666543110 00112333566764
Q ss_pred cCceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 133 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
.++|+++-|++.. .+.+.+... ...+++|= |+ + .|++ +..+++|+.+...+.----..+....++++
T Consensus 149 ~~vD~V~iatp~~-~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 224 (433)
T 1h6d_A 149 PKIDAVYIILPNS-LHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIR 224 (433)
T ss_dssp TTCCEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCch-hHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHH
Confidence 5899999999754 344444332 33477773 44 3 3343 333668887765544444444444555554
No 156
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.20 E-value=0.00062 Score=59.83 Aligned_cols=106 Identities=14% Similarity=0.232 Sum_probs=63.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|..|+ +.| .+.+++.++.+. + .+..++..+++ .++|++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~Dvv 60 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLI-IYD----------VFPDACKEFQDA-G-------EQVVSSPADVA-EKADRI 60 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEE-EEC----------SSTHHHHHHHTT-T-------CEECSSHHHHH-HHCSEE
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc-C-------CeecCCHHHHH-hcCCEE
Confidence 479999999999999999999999876 666 455665554432 1 22222233444 379999
Q ss_pred eeCCccCcccccchh-------cc-CceEEEecCCCCCC--HHHHHHHHHCCCeEe
Q psy14499 139 IPAAIEDQITINNAN-------NV-TAKIILEGANGPTT--TEADDILRDKGIILA 184 (262)
Q Consensus 139 ipaa~~~~it~e~a~-------~~-~~kiIve~AN~p~t--~ea~~~l~~rgi~~i 184 (262)
+.|.+......+... .+ +.++|+..+..+.. .+..+.+.++|+.++
T Consensus 61 i~~vp~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~ 116 (296)
T 2gf2_A 61 ITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFM 116 (296)
T ss_dssp EECCSSHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEeCCCHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 999754332222221 23 34588883333221 222345666776543
No 157
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.18 E-value=0.0026 Score=57.47 Aligned_cols=131 Identities=8% Similarity=0.037 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCC-HHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 56 IINSKISIQGFG-NVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 56 l~~~~v~IqGfG-~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
-+..||+|+|+| .+|+..++.|.+. ++++++|+| .|+++..+..++.+. ...+++.++++.
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~~~------~~~~~~~~~ll~ 79 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS----------RTRSHAEEFAKMVGN------PAVFDSYEELLE 79 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC----------SSHHHHHHHHHHHSS------CEEESCHHHHHH
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc----------CCHHHHHHHHHHhCC------CcccCCHHHHhc
Confidence 466899999999 8999988888875 689999999 688887777666542 123443566764
Q ss_pred -cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 133 -IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 133 -~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
.++|+++-|++.. .+.+.+... ...+++|=.=.....|++++ .+++|+.+...+.----.......++++
T Consensus 80 ~~~vD~V~i~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 156 (340)
T 1zh8_A 80 SGLVDAVDLTLPVE-LNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVE 156 (340)
T ss_dssp SSCCSEEEECCCGG-GHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCch-HHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh
Confidence 4799999999743 344444432 44588883211122444433 3678887765554444444444455553
No 158
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.18 E-value=0.00089 Score=59.20 Aligned_cols=102 Identities=20% Similarity=0.221 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC---EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~---~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
+.++|.|+|+|++|+++++.|.+.|. .|+ ++| .+.+++.++.++.+ ....++..+.+ .
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~-v~d----------r~~~~~~~l~~~~g-------i~~~~~~~~~~-~ 62 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRIC-VTN----------RSLDKLDFFKEKCG-------VHTTQDNRQGA-L 62 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEE-EEC----------SSSHHHHHHHHTTC-------CEEESCHHHHH-S
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEE-EEe----------CCHHHHHHHHHHcC-------CEEeCChHHHH-h
Confidence 45789999999999999999999997 665 777 46677766665432 22232233444 4
Q ss_pred CceEEeeCCccCcccc---cchhc-cCce-EEEecCCCCCCHHHHHHHH
Q psy14499 134 PCDILIPAAIEDQITI---NNANN-VTAK-IILEGANGPTTTEADDILR 177 (262)
Q Consensus 134 ~~DIlipaa~~~~it~---e~a~~-~~~k-iIve~AN~p~t~ea~~~l~ 177 (262)
++|++|.|.....+.. +..+. ++.+ +|+.-+++-......+.+.
T Consensus 63 ~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~ 111 (280)
T 3tri_A 63 NADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLG 111 (280)
T ss_dssp SCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHT
T ss_pred cCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcC
Confidence 8999999987644421 12222 3444 7776666544344444443
No 159
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.17 E-value=0.0038 Score=56.91 Aligned_cols=97 Identities=20% Similarity=0.374 Sum_probs=59.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCCC---------Ccee--
Q psy14499 59 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDFN---------EGEK-- 123 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~~---------~~~~-- 123 (262)
.||+|.|||.+|+.+++.|.+ .+..+++|.|.. .|++.+..+.+ .++.+.+.. +.+.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~--------~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~ 75 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPF--------IDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPIT 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSS--------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCC--------CCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEE
Confidence 699999999999999999876 579999998820 25665544433 222221100 0111
Q ss_pred -cC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 -IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 -~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
+. +++++ | +.++|++++|++. ..+.+.+... .+| +++++.
T Consensus 76 v~~~~d~~~l~~~~~~vDvV~eatg~-~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 76 IFQERDPSKIKWGDAGAEYVVESTGV-FTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp EECCSSGGGCCTTTTTCCEEEECSSS-CCSHHHHGGGGGGTCSEEEESSC
T ss_pred EEecCCHHHCccccCCCCEEEECCCc-hhhHHHHHHHHhCCCeEEEeccC
Confidence 11 24444 4 3589999999864 3455555554 444 555655
No 160
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.16 E-value=0.0016 Score=59.64 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC--ceecCCCccccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE--GEKINDSKEFWS 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~--~~~~~~~~~il~ 132 (262)
.+.++++|+|.|..|+..++.|.. .+.+-|.|.| .+.++..++.++... +++ ....++.++.+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~----------r~~~~a~~la~~~~~---~~g~~~~~~~~~~eav- 192 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYD----------TDPLATAKLIANLKE---YSGLTIRRASSVAEAV- 192 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEEC----------SSHHHHHHHHHHHTT---CTTCEEEECSSHHHHH-
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEc----------CCHHHHHHHHHHHHh---ccCceEEEeCCHHHHH-
Confidence 477899999999999999988754 5666666888 578777777665321 112 12233234455
Q ss_pred cCceEEeeCCccC----cccccchhccCceEEEecCCCCCCHHHHHHHHHCCCeEecccc
Q psy14499 133 IPCDILIPAAIED----QITINNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVI 188 (262)
Q Consensus 133 ~~~DIlipaa~~~----~it~e~a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~ 188 (262)
.++||++-|++.. ++..+.. +-.+-++..|+..|-..|....+.+++..|+ |..
T Consensus 193 ~~aDiVi~aTps~~~~pvl~~~~l-~~G~~V~~vgs~~p~~~El~~~~~~~a~v~v-D~~ 250 (350)
T 1x7d_A 193 KGVDIITTVTADKAYATIITPDML-EPGMHLNAVGGDCPGKTELHADVLRNARVFV-EYE 250 (350)
T ss_dssp TTCSEEEECCCCSSEEEEECGGGC-CTTCEEEECSCCBTTBEEECHHHHHTSEEEE-SSH
T ss_pred hcCCEEEEeccCCCCCceecHHHc-CCCCEEEECCCCCCCceeeCHHHHhcCcEEE-CCH
Confidence 4799999999865 2332221 1245677788888876666666677776444 543
No 161
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.16 E-value=0.0015 Score=58.72 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCHHHH-HHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 56 IINSKISIQGFGNVGS-VAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~-~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
++..||+|+|+|.+|. ..++.|...++++++|+| .|.++..+..++.+ +...+++.++++. .
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d----------~~~~~~~~~a~~~~------~~~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFE----------SDSDNRAKFTSLFP------SVPFAASAEQLITDA 65 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEEC----------SCTTSCHHHHHHST------TCCBCSCHHHHHTCT
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeC----------CCHHHHHHHHHhcC------CCcccCCHHHHhhCC
Confidence 3457999999999996 577777778999999999 45555555555443 2223343556664 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHH---HHHHCCCeEecc
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAPD 186 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~---~l~~rgi~~iPD 186 (262)
++|+++-|++.. .+.+.+... ...+++|= |+ + .++++ ..+++|+.+...
T Consensus 66 ~~D~V~i~tp~~-~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v~ 123 (336)
T 2p2s_A 66 SIDLIACAVIPC-DRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFAVY 123 (336)
T ss_dssp TCCEEEECSCGG-GHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCCEEEEeCChh-hHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 799999998743 344444432 33477773 44 3 34443 336778877633
No 162
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.16 E-value=0.0028 Score=57.61 Aligned_cols=127 Identities=16% Similarity=0.208 Sum_probs=79.2
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 57 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
+..||+|+|+|.+|+. .++.|.+. ++++++|+| .|.+++ .++ |++...+++.++++. .
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~---~~~------~~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMT----------SRTEEV---KRD------FPDAEVVHELEEITNDP 64 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEEC----------SCHHHH---HHH------CTTSEEESSTHHHHTCT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEc----------CCHHHH---Hhh------CCCCceECCHHHHhcCC
Confidence 4579999999999996 67777665 899999999 466552 222 223444555677774 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 65 ~vD~V~i~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (358)
T 3gdo_A 65 AIELVIVTTPSG-LHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLIS 139 (358)
T ss_dssp TCCEEEECSCTT-THHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCEEEEcCCcH-HHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHh
Confidence 899999999753 444444443 445788742222224444 334678887765554433444444445544
No 163
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.16 E-value=0.0011 Score=57.08 Aligned_cols=109 Identities=21% Similarity=0.282 Sum_probs=66.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC----EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA----KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~----~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
++|.|+|+|++|+.+++.|.+.|. .|+ ++| .+.+++.++.++.+ ....++..+.+ .+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~----------r~~~~~~~~~~~~g-------~~~~~~~~e~~-~~ 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSD----------LNTANLKNASEKYG-------LTTTTDNNEVA-KN 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EEC----------SCHHHHHHHHHHHC-------CEECSCHHHHH-HH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEe----------CCHHHHHHHHHHhC-------CEEeCChHHHH-Hh
Confidence 689999999999999999999997 766 777 57777766655432 22222233444 47
Q ss_pred ceEEeeCCccCcccccchhc----cC-ceEEEecCCCCCCHHHHHHHHH--CCCeEeccc
Q psy14499 135 CDILIPAAIEDQITINNANN----VT-AKIILEGANGPTTTEADDILRD--KGIILAPDV 187 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~----~~-~kiIve~AN~p~t~ea~~~l~~--rgi~~iPD~ 187 (262)
+|+++.|.....+ .+..+. ++ .++|+.-.++-......+.+.. +-+...|+.
T Consensus 64 aDvVilav~~~~~-~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~ 122 (247)
T 3gt0_A 64 ADILILSIKPDLY-ASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNT 122 (247)
T ss_dssp CSEEEECSCTTTH-HHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCG
T ss_pred CCEEEEEeCHHHH-HHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCCh
Confidence 9999999855432 222222 32 4577765554443344444432 234455654
No 164
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.15 E-value=0.00075 Score=60.24 Aligned_cols=113 Identities=9% Similarity=0.126 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 57 INSKISIQGFGNVGSV-AANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~-~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
+.+||+|+|+|++|+. .++.|.+ .++++++|+|. +.++..+..++.+- ..+++.+++ ..+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~~~~~g~-------~~~~~~~~l-~~~ 65 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP----------TRAKALPICESWRI-------PYADSLSSL-AAS 65 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS----------SCTTHHHHHHHHTC-------CBCSSHHHH-HTT
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHHHHHcCC-------CccCcHHHh-hcC
Confidence 4579999999999996 8888866 47899999993 44444444444331 122323344 568
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCCC-HHHH---HHHHHCCCeEeccccc
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTT-TEAD---DILRDKGIILAPDVIT 189 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t-~ea~---~~l~~rgi~~iPD~~a 189 (262)
+|+++-|++.. .+.+.+... ...+++|-.= .++ .+++ +..+++|+.+...+.-
T Consensus 66 ~D~V~i~tp~~-~h~~~~~~al~~G~~v~~eKP~-~~~~~~~~~l~~~a~~~g~~~~~~~~~ 125 (319)
T 1tlt_A 66 CDAVFVHSSTA-SHFDVVSTLLNAGVHVCVDKPL-AENLRDAERLVELAARKKLTLMVGFNR 125 (319)
T ss_dssp CSEEEECSCTT-HHHHHHHHHHHTTCEEEEESSS-CSSHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred CCEEEEeCCch-hHHHHHHHHHHcCCeEEEeCCC-CCCHHHHHHHHHHHHHcCCeEEEeeec
Confidence 99999998754 333333332 3447777421 123 3333 3346788877654443
No 165
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.14 E-value=0.0013 Score=58.83 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=70.2
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
.-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+.++.+|...|++|+ |++++- -|
T Consensus 139 ~~~PcTp~gv~----~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~t-------~~--------- 197 (285)
T 3l07_A 139 CLESCTPKGIM----TMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVT-TCHRFT-------TD--------- 197 (285)
T ss_dssp CCCCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-------SS---------
T ss_pred CCCCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-EEeCCc-------hh---------
Confidence 34668999885 4677788999999999999988 89999999999999976 886420 01
Q ss_pred hcCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCC
Q psy14499 111 FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGP 167 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p 167 (262)
..+.. ..+||+|-++. .+.++++..+. .-+|++-+-++
T Consensus 198 ----------------L~~~~-~~ADIVI~Avg~p~~I~~~~vk~--GavVIDvgi~~ 236 (285)
T 3l07_A 198 ----------------LKSHT-TKADILIVAVGKPNFITADMVKE--GAVVIDVGINH 236 (285)
T ss_dssp ----------------HHHHH-TTCSEEEECCCCTTCBCGGGSCT--TCEEEECCCEE
T ss_pred ----------------HHHhc-ccCCEEEECCCCCCCCCHHHcCC--CcEEEEecccC
Confidence 11222 47899998876 46777776632 34667666555
No 166
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.13 E-value=0.0015 Score=59.65 Aligned_cols=130 Identities=12% Similarity=0.146 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCHHHH-HHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGFGNVGS-VAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~-~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+..||+|+|+|.++. ..+..|...++++++|+| .|+++..+..++.+. ...+++.+++++ .+
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d----------~~~~~a~~~a~~~~~------~~~~~~~~~ll~~~~ 88 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHE----------KDDALAAEFSAVYAD------ARRIATAEEILEDEN 88 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEEC----------SCHHHHHHHHHHSSS------CCEESCHHHHHTCTT
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEc----------CCHHHHHHHHHHcCC------CcccCCHHHHhcCCC
Confidence 468999999999985 567777788999999999 688888777766542 233444567775 47
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccccccch-hhHHHHHHHHh
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDVITNAG-GVIVSYFEWVQ 203 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~~aN~G-Gvi~s~~E~~~ 203 (262)
+|+++-|++.. .+.+.+... ...+++|=.=.....|++++ .+++|+.+...+.---. ..+....++++
T Consensus 89 vD~V~I~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i~ 163 (361)
T 3u3x_A 89 IGLIVSAAVSS-ERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVA 163 (361)
T ss_dssp CCEEEECCCHH-HHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHHH
T ss_pred CCEEEEeCChH-HHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHHH
Confidence 99999888653 344444433 45588885322223445433 36788877655544332 33334444443
No 167
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.11 E-value=0.00039 Score=62.10 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+..+|+|+|+|++|+..++.|.+. +.++++|+| .|.+++.+..++ ...+++.++++. .+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d----------~~~~~~~~~~~~---------~~~~~~~~~~l~~~~ 69 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLAS----------SNPDNLALVPPG---------CVIESDWRSVVSAPE 69 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEE----------SCHHHHTTCCTT---------CEEESSTHHHHTCTT
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHhh---------CcccCCHHHHhhCCC
Confidence 347999999999999999999885 789999999 566654332221 122343566774 58
Q ss_pred ceEEeeCCccCcccccchhc-c--CceEEEecCCCCC--CH-HH---HHHHHHCCCeEeccccc
Q psy14499 135 CDILIPAAIEDQITINNANN-V--TAKIILEGANGPT--TT-EA---DDILRDKGIILAPDVIT 189 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~-~--~~kiIve~AN~p~--t~-ea---~~~l~~rgi~~iPD~~a 189 (262)
+|+++-|++.. .+.+.+.. + ...+++|- |+ +. ++ .+..+++|+.+...+..
T Consensus 70 ~D~V~i~tp~~-~h~~~~~~al~~Gk~v~~eK---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 129 (315)
T 3c1a_A 70 VEAVIIATPPA-THAEITLAAIASGKAVLVEK---PLTLDLAEAEAVAAAAKATGVMVWVEHTQ 129 (315)
T ss_dssp CCEEEEESCGG-GHHHHHHHHHHTTCEEEEES---SSCSCHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CCEEEEeCChH-HHHHHHHHHHHCCCcEEEcC---CCcCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 99999998754 33444443 2 33477773 43 33 33 33446788877654443
No 168
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.11 E-value=0.0014 Score=58.51 Aligned_cols=96 Identities=21% Similarity=0.242 Sum_probs=70.6
Q ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 33 RQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 33 ~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+.++.+|.+.|++|+ |++++- -|
T Consensus 139 ~~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt-v~h~~t-------~~---------- 196 (285)
T 3p2o_A 139 FLPCTPLGVM----KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVS-VCHIKT-------KD---------- 196 (285)
T ss_dssp CCCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-------SC----------
T ss_pred CCCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeCCc-------hh----------
Confidence 4678999984 5677789999999999999987 89999999999999976 887421 01
Q ss_pred cCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCCC
Q psy14499 112 TRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 168 (262)
Q Consensus 112 ~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p~ 168 (262)
..+.. ..+||+|-++. .+.++++..+ ..-+|++-+-++.
T Consensus 197 ---------------L~~~~-~~ADIVI~Avg~p~~I~~~~vk--~GavVIDVgi~~~ 236 (285)
T 3p2o_A 197 ---------------LSLYT-RQADLIIVAAGCVNLLRSDMVK--EGVIVVDVGINRL 236 (285)
T ss_dssp ---------------HHHHH-TTCSEEEECSSCTTCBCGGGSC--TTEEEEECCCEEC
T ss_pred ---------------HHHHh-hcCCEEEECCCCCCcCCHHHcC--CCeEEEEeccCcc
Confidence 11222 47899998876 4677777663 2446777665553
No 169
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.10 E-value=0.00083 Score=59.79 Aligned_cols=108 Identities=16% Similarity=0.243 Sum_probs=66.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
-++|.|+|+|++|+.+++.|.+.|.+|+ +.|. +.+++.++.+. | ....++..+.+ .++|+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~-~~~~----------~~~~~~~~~~~-g-------~~~~~~~~~~~-~~~Dv 89 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVT-VWNR----------TAEKCDLFIQE-G-------ARLGRTPAEVV-STCDI 89 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEE-EECS----------SGGGGHHHHHT-T-------CEECSCHHHHH-HHCSE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEE-EEeC----------CHHHHHHHHHc-C-------CEEcCCHHHHH-hcCCE
Confidence 3789999999999999999999999876 6662 34443333332 1 12222133444 37999
Q ss_pred EeeCCccCcccccch-------hcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEec
Q psy14499 138 LIPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILAP 185 (262)
Q Consensus 138 lipaa~~~~it~e~a-------~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~iP 185 (262)
++.|.+......+.. +.+ +.++|+...|... ..+..+.+.++|+.++.
T Consensus 90 Vi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 90 TFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp EEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 999988432222222 223 3568888888542 22334556667887763
No 170
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.10 E-value=0.0026 Score=58.01 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 57 INSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
+..||+|+|+|.+|+. .++.|.+. ++++++|+| .|.+++. ++ +++...+++.++++. .
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~---~~------~~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS----------RDEEKVK---RD------LPDVTVIASPEAAVQHP 66 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC----------SCHHHHH---HH------CTTSEEESCHHHHHTCT
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc----------CCHHHHH---hh------CCCCcEECCHHHHhcCC
Confidence 4579999999999996 77777664 899999999 5666543 22 234444554567774 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~~D~V~i~tp~~-~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (364)
T 3e82_A 67 DVDLVVIASPNA-THAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIE 141 (364)
T ss_dssp TCSEEEECSCGG-GHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCChH-HHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHH
Confidence 899999998653 344444432 445777632111223343 344678887765443333333334444443
No 171
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.06 E-value=0.00049 Score=53.20 Aligned_cols=33 Identities=21% Similarity=0.483 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+++++|+|.|+|.+|+.+++.|.+.|++|+ +.|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~-~~d 36 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVL-AVD 36 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCE-EEE
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 456789999999999999999999999887 555
No 172
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.06 E-value=0.0016 Score=58.19 Aligned_cols=97 Identities=13% Similarity=0.184 Sum_probs=70.0
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
.-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+.++.+|...|++|+ ++.++- -|+
T Consensus 139 ~~~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVt-v~hs~T-------~~L-------- 198 (286)
T 4a5o_A 139 LLRPCTPKGIM----TLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVT-VTHRFT-------RDL-------- 198 (286)
T ss_dssp SSCCHHHHHHH----HHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEE-EECTTC-------SCH--------
T ss_pred CCCCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-EEeCCC-------cCH--------
Confidence 34668998874 4677789999999999999987 99999999999999987 776421 011
Q ss_pred hcCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCCC
Q psy14499 111 FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 168 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p~ 168 (262)
.+.. ..+||+|-+.. .+.++.+..+ ..-+|++-+-++.
T Consensus 199 -----------------~~~~-~~ADIVI~Avg~p~~I~~~~vk--~GavVIDvgi~~~ 237 (286)
T 4a5o_A 199 -----------------ADHV-SRADLVVVAAGKPGLVKGEWIK--EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------------HHHH-HTCSEEEECCCCTTCBCGGGSC--TTCEEEECCSCSS
T ss_pred -----------------HHHh-ccCCEEEECCCCCCCCCHHHcC--CCeEEEEeccccc
Confidence 1222 47888888875 4677777663 2346777665553
No 173
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.06 E-value=0.0039 Score=54.24 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=58.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|.+|+ +.| .+.+.+.+..+ .+.. . ...++.+++ .++|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------~~~~~~~~~~~-~g~~----~-~~~~~~~~~--~~~D~v 61 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVS----------RQQSTCEKAVE-RQLV----D-EAGQDLSLL--QTAKII 61 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHH-TTSC----S-EEESCGGGG--TTCSEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHh-CCCC----c-cccCCHHHh--CCCCEE
Confidence 479999999999999999999999877 557 46666655443 2211 0 112223444 689999
Q ss_pred eeCCccCcccccch----hcc-CceEEEecCCCC
Q psy14499 139 IPAAIEDQITINNA----NNV-TAKIILEGANGP 167 (262)
Q Consensus 139 ipaa~~~~it~e~a----~~~-~~kiIve~AN~p 167 (262)
+.|.+...+ .+.+ +.+ ..++|+..+|.+
T Consensus 62 i~av~~~~~-~~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 62 FLCTPIQLI-LPTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp EECSCHHHH-HHHHHHHGGGSCTTCEEEECCSCC
T ss_pred EEECCHHHH-HHHHHHHHhhCCCCCEEEECCCCc
Confidence 999986532 2222 223 245788876643
No 174
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.06 E-value=0.0022 Score=59.27 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=31.5
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
++.+.+|+|+|+|.+|+.+++.+..+|++|+ ++|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~-~~d~ 203 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVM-ATDV 203 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 5689999999999999999999999999955 7774
No 175
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.05 E-value=0.00086 Score=56.97 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
-++|+|+|.|++|+.+++.|.+.|..|+.+.| .+.+++.++.++.+. ....+..+.+ .++|+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~----------r~~~~~~~l~~~~g~-------~~~~~~~~~~-~~aDv 84 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANS----------RGPASLSSVTDRFGA-------SVKAVELKDA-LQADV 84 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECT----------TCGGGGHHHHHHHTT-------TEEECCHHHH-TTSSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEEC----------CCHHHHHHHHHHhCC-------CcccChHHHH-hcCCE
Confidence 36899999999999999999999999885577 355555555444321 1111122333 57999
Q ss_pred EeeCCccCcccccchhc---cCceEEEecCCCC
Q psy14499 138 LIPAAIEDQITINNANN---VTAKIILEGANGP 167 (262)
Q Consensus 138 lipaa~~~~it~e~a~~---~~~kiIve~AN~p 167 (262)
++.|.+...+. +.+.+ ++.++|+..+|+-
T Consensus 85 Vilavp~~~~~-~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 85 VILAVPYDSIA-DIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp EEEESCGGGHH-HHHTTCSCCTTCEEEECCCCB
T ss_pred EEEeCChHHHH-HHHHHhhccCCCEEEEcCCCC
Confidence 99998754332 22222 4567999999875
No 176
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=97.05 E-value=0.0079 Score=54.79 Aligned_cols=96 Identities=21% Similarity=0.385 Sum_probs=59.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh---cCCccCC--C-------Ccee--c
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF---TRSIKDF--N-------EGEK--I 124 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~---~g~~~~~--~-------~~~~--~ 124 (262)
.||+|.|||.+|+.+++.|.+....+++|.|. .|++-+..+.+. .|.+.+. + +.+. +
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~---------~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v 71 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL---------TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRA 71 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC---------CCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEE
Confidence 48999999999999999987778999999882 377766555442 3322110 0 1111 1
Q ss_pred C---CCccc-c-ccCceEEeeCCccCcccccchhcc---Cc-eEEEecC
Q psy14499 125 N---DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TA-KIILEGA 164 (262)
Q Consensus 125 ~---~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~-kiIve~A 164 (262)
. +++++ | +.++|++++|++ ...+.+.++.. .| |+|+.+.
T Consensus 72 ~~~~dp~~l~w~~~gvDiV~estG-~~~s~e~a~~~l~aGakkvVIsap 119 (331)
T 2g82_O 72 TAVKDPKEIPWAEAGVGVVIESTG-VFTDADKAKAHLEGGAKKVIITAP 119 (331)
T ss_dssp ECCSSGGGSCTTTTTEEEEEECSS-SCCBHHHHTHHHHTTCSEEEESSC
T ss_pred EecCChhhCcccccCCCEEEECCC-chhhHHHHHHHHHCCCCEEEECCC
Confidence 0 13222 3 357899999885 44556666554 34 3666554
No 177
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.04 E-value=0.0015 Score=57.48 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCce
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 136 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~D 136 (262)
..+||++.|+|+||+.+++. . +..++++.| +..| .+ +....+|.++++. ++|
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g--------------el----gv~a~~d~d~lla-~pD 62 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK--------------DI----PGVVRLDEFQVPS-DVS 62 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC--------------CC----SSSEECSSCCCCT-TCC
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc--------------cc----CceeeCCHHHHhh-CCC
Confidence 56899999999999999998 4 899999877 2122 11 1223344677885 999
Q ss_pred EEeeCCccCcccccchhccCc-eEEEecCCCCC-CHHHHHHH----HHCCCeE
Q psy14499 137 ILIPAAIEDQITINNANNVTA-KIILEGANGPT-TTEADDIL----RDKGIIL 183 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~~~-kiIve~AN~p~-t~ea~~~l----~~rgi~~ 183 (262)
++++|+....+.+.-.+-+++ +=|+-.+-+.+ .++..+.| ++.|..+
T Consensus 63 ~VVe~A~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l 115 (253)
T 1j5p_A 63 TVVECASPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARV 115 (253)
T ss_dssp EEEECSCHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEE
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeE
Confidence 999999776555433444433 43444444444 45544444 3455554
No 178
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.03 E-value=0.0034 Score=58.85 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC----CCccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN----DSKEF 130 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~----~~~~i 130 (262)
++..||+|+|+|.+|+..++.|.+. ++++++|+| .|.+++.+..+..... ++|....++ +.+++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d----------~~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~l 86 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFAD----------PDPYMVGRAQEILKKN-GKKPAKVFGNGNDDYKNM 86 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEC----------SCHHHHHHHHHHHHHT-TCCCCEEECSSTTTHHHH
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEe----------CCHHHHHHHHHHHHhc-CCCCCceeccCCCCHHHH
Confidence 4568999999999999999888774 799999999 6777766654421000 122233343 35677
Q ss_pred cc-cCceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHHH---HHHCCCeEe
Q psy14499 131 WS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADDI---LRDKGIILA 184 (262)
Q Consensus 131 l~-~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~~---l~~rgi~~i 184 (262)
+. .++|+++-|++.. .+.+.+... ...+++| -|+ | .+++++ .+++|+.+.
T Consensus 87 l~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 87 LKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp TTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred hcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 75 4799999999754 444544442 3457888 344 3 334333 367787665
No 179
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.03 E-value=0.002 Score=58.01 Aligned_cols=54 Identities=22% Similarity=0.380 Sum_probs=46.6
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCC
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+.++.+|.+.|++|+ |+++
T Consensus 143 ~~~PcTp~gv~----~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~~~ 197 (300)
T 4a26_A 143 PFTPCTAKGVI----VLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVT-IVHS 197 (300)
T ss_dssp SCCCHHHHHHH----HHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred CCCCCCHHHHH----HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-EEeC
Confidence 44679999975 4666778999999999999987 89999999999999976 8875
No 180
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.01 E-value=0.0026 Score=57.75 Aligned_cols=111 Identities=16% Similarity=0.224 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+..||+|+|+|++|+..++.|.+. ++++++|+| .+.++..+..++.+- . +....+++.++++. .+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d----------~~~~~~~~~a~~~~~-~--~~~~~~~~~~~ll~~~~ 71 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVAS----------RSLEKAKAFATANNY-P--ESTKIHGSYESLLEDPE 71 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC----------SSHHHHHHHHHHTTC-C--TTCEEESSHHHHHHCTT
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc----------CCHHHHHHHHHHhCC-C--CCCeeeCCHHHHhcCCC
Confidence 347999999999999999998875 789999999 577777666665431 0 11233443556764 47
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHH---HHHHCCCeEe
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILA 184 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~---~l~~rgi~~i 184 (262)
+|+++-|++.. .+.+.+... ...+++|= |+ + .++++ ..+++|+.+.
T Consensus 72 ~D~V~i~tp~~-~h~~~~~~al~aGk~V~~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 72 IDALYVPLPTS-LHVEWAIKAAEKGKHILLEK---PVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp CCEEEECCCGG-GHHHHHHHHHTTTCEEEECS---SCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred CCEEEEcCChH-HHHHHHHHHHHCCCeEEEec---CCcCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999644 344444433 34477763 43 3 34433 3356787765
No 181
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.01 E-value=0.00045 Score=61.94 Aligned_cols=119 Identities=10% Similarity=0.054 Sum_probs=72.5
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
+..||+|.| +|++|+.+++.+.+ .++.++++.|+++.- ..|.|..++... .. .+....++.++++. +
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~--~~G~d~gel~G~-------~~-~gv~v~~dl~~ll~-~ 88 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS--FVDKDASILIGS-------DF-LGVRITDDPESAFS-N 88 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT--TTTSBGGGGTTC-------SC-CSCBCBSCHHHHTT-S
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc--ccccchHHhhcc-------Cc-CCceeeCCHHHHhc-C
Confidence 457999999 99999999999875 589999999975421 135555432110 00 12223333455664 8
Q ss_pred ceEEeeCCccCcccccchhc---cCceEEEecCCCCCCHHHHHHH----HHCCCeEeccccc
Q psy14499 135 CDILIPAAIEDQITINNANN---VTAKIILEGANGPTTTEADDIL----RDKGIILAPDVIT 189 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~---~~~kiIve~AN~p~t~ea~~~l----~~rgi~~iPD~~a 189 (262)
+||+|+++.+... .+++.. -+..+|+.-. .++++..+.| ++.++++.|.|..
T Consensus 89 aDVvIDFT~p~a~-~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~Si 147 (288)
T 3ijp_A 89 TEGILDFSQPQAS-VLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNMSL 147 (288)
T ss_dssp CSEEEECSCHHHH-HHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCCCH
T ss_pred CCEEEEcCCHHHH-HHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCCcH
Confidence 9999999975543 333333 3556666543 2566544333 3356777777754
No 182
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.01 E-value=0.0029 Score=58.16 Aligned_cols=128 Identities=19% Similarity=0.156 Sum_probs=79.7
Q ss_pred CCeEEEEcCC-HHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 58 NSKISIQGFG-NVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 58 ~~~v~IqGfG-~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
.+||+|+|+| .+|...++.|.+. ++++++|+| .|.++..+..++.+ ...+++.++++. .+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~g-------~~~~~~~~ell~~~~ 64 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD----------PNEDVRERFGKEYG-------IPVFATLAEMMQHVQ 64 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC----------SCHHHHHHHHHHHT-------CCEESSHHHHHHHSC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe----------CCHHHHHHHHHHcC-------CCeECCHHHHHcCCC
Confidence 4689999999 9999999888774 789999999 67887776666543 223343567774 47
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 65 vD~V~i~tp~~-~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 138 (387)
T 3moi_A 65 MDAVYIASPHQ-FHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQ 138 (387)
T ss_dssp CSEEEECSCGG-GHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHH
T ss_pred CCEEEEcCCcH-HHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHh
Confidence 99999998754 344444433 344777742111123343 334677887654443333333333444443
No 183
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.01 E-value=0.0011 Score=60.40 Aligned_cols=116 Identities=14% Similarity=0.212 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 56 IINSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
++..||+|+|+|.+|+. .++.|.+. ++++++|+| .|+++..+..++. +....+++.++++.
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d----------~~~~~~~~~a~~~------~~~~~~~~~~~ll~~ 66 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD----------SDLERARRVHRFI------SDIPVLDNVPAMLNQ 66 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC----------SSHHHHGGGGGTS------CSCCEESSHHHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc----------CCHHHHHHHHHhc------CCCcccCCHHHHhcC
Confidence 45689999999999985 78888775 799999999 6777765555442 23333444567774
Q ss_pred cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEecccc
Q psy14499 133 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVI 188 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~ 188 (262)
.++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.
T Consensus 67 ~~vD~V~i~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 127 (359)
T 3m2t_A 67 VPLDAVVMAGPPQ-LHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMN 127 (359)
T ss_dssp SCCSEEEECSCHH-HHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCH
T ss_pred CCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5789999988743 334443332 344777742211223444 334667887764443
No 184
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.00 E-value=0.0019 Score=60.26 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+.+.+|+|+|+|.+|..+++.+..+|++|+ ++|.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~-v~D~ 203 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVR-AFDT 203 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 568999999999999999999999999866 7773
No 185
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.00 E-value=0.00028 Score=62.60 Aligned_cols=115 Identities=13% Similarity=0.197 Sum_probs=68.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCC--CceecCCCccccc
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN--EGEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~--~~~~~~~~~~il~ 132 (262)
+.+||+|.|+ |.+|+.+++.+.+ .++.+++++|....-. .|-|..+ +.+.+ +....++.++++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~----------~~g~~~~~v~~~~dl~~~l~ 71 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGE----------LAGAGKTGVTVQSSLDAVKD 71 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTC----------SSSSSCCSCCEESCSTTTTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHH----------HcCCCcCCceecCCHHHHhc
Confidence 4579999999 9999999998764 6899999998532100 0223211 11111 1222333455664
Q ss_pred cCceEEeeCCccCcccccchh---ccCceEEEecCCCCCCHHHHHHHHH----CCCeEeccc
Q psy14499 133 IPCDILIPAAIEDQITINNAN---NVTAKIILEGANGPTTTEADDILRD----KGIILAPDV 187 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~---~~~~kiIve~AN~p~t~ea~~~l~~----rgi~~iPD~ 187 (262)
++|++|+++.+... .+++. +-+..+|++-. .++++..+.|.+ .++++.|.+
T Consensus 72 -~~DvVIDft~p~~~-~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a~~~~vv~a~N~ 129 (273)
T 1dih_A 72 -DFDVFIDFTRPEGT-LNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAAADIAIVFAANF 129 (273)
T ss_dssp -SCSEEEECSCHHHH-HHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHTTTSCEEECSCC
T ss_pred -CCCEEEEcCChHHH-HHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhcCCCCEEEEecC
Confidence 89999999965432 33333 23566888776 366665555543 355555544
No 186
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.00 E-value=0.00094 Score=56.31 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=65.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc----ccC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----SIP 134 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il----~~~ 134 (262)
++|+|+|+|.+|+.+++.|.+.|..++ +.| .|++.+.++.+..+...-+.+. . ..+.+ -.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~-vid----------~~~~~~~~l~~~~~~~~i~gd~---~-~~~~l~~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVV-IIN----------KDRELCEEFAKKLKATIIHGDG---S-HKEILRDAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEE-EEE----------SCHHHHHHHHHHSSSEEEESCT---T-SHHHHHHHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEE----------CCHHHHHHHHHHcCCeEEEcCC---C-CHHHHHhcCccc
Confidence 479999999999999999999999988 666 4777776655432210000011 1 11122 147
Q ss_pred ceEEeeCCccCccc---ccchhcc-CceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 135 CDILIPAAIEDQIT---INNANNV-TAKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 135 ~DIlipaa~~~~it---~e~a~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
+|++|-|+..+..+ ...++++ ....|+.-+|.+ +-.+.|++-|+.
T Consensus 66 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~---~~~~~l~~~G~d 114 (218)
T 3l4b_C 66 NDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDP---GNMEIFKKMGIT 114 (218)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTSCCCEEEECCCSG---GGHHHHHHHTCE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHHcCCCeEEEEEeCc---chHHHHHHCCCC
Confidence 99999988765544 3344442 333344444444 445667788875
No 187
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.98 E-value=0.00046 Score=60.55 Aligned_cols=105 Identities=13% Similarity=0.150 Sum_probs=65.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|.+|+ +.| + ++ ..++ +.+. | ....++.++.+ .++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~-----~~--~~~~---~~~~-g-------~~~~~~~~~~~-~~~D~v 62 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-I-----GP--VADE---LLSL-G-------AVNVETARQVT-EFADII 62 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-S-----SC--CCHH---HHTT-T-------CBCCSSHHHHH-HTCSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-C-----HH--HHHH---HHHc-C-------CcccCCHHHHH-hcCCEE
Confidence 589999999999999999999999876 555 2 11 1122 2222 1 11122133444 389999
Q ss_pred eeCCccCcccccch-------hcc-CceEEEecCCCCC--CHHHHHHHHHCCCeEe
Q psy14499 139 IPAAIEDQITINNA-------NNV-TAKIILEGANGPT--TTEADDILRDKGIILA 184 (262)
Q Consensus 139 ipaa~~~~it~e~a-------~~~-~~kiIve~AN~p~--t~ea~~~l~~rgi~~i 184 (262)
+.|.+......+.. +.+ +.++|+.-.|+.. ..+..+.+.++|+.++
T Consensus 63 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 63 FIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp EECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred EEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99986554222222 223 3568888888743 2344566677788776
No 188
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.97 E-value=0.0032 Score=56.55 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=65.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC-ccC--CC---Cc-eecCCCccc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS-IKD--FN---EG-EKINDSKEF 130 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~-~~~--~~---~~-~~~~~~~~i 130 (262)
.++|+|+|.|.+|..++..|.+.|..|+ +.| .+.+.+.++.+..+. +.+ ++ .. ...++.++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~-~~~----------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVL-AWD----------IDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA 72 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH
Confidence 3699999999999999999999999976 666 456666555544221 101 00 00 112212333
Q ss_pred cccCceEEeeCCccCcccccchhc----cC-ceEEEecCC-CCCCHHHHHHHHHCC
Q psy14499 131 WSIPCDILIPAAIEDQITINNANN----VT-AKIILEGAN-GPTTTEADDILRDKG 180 (262)
Q Consensus 131 l~~~~DIlipaa~~~~it~e~a~~----~~-~kiIve~AN-~p~t~ea~~~l~~rg 180 (262)
+ .++|+++-|...... .+.+.. ++ .++|+...| .+-+.+..+.+.++|
T Consensus 73 ~-~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 73 V-KDADVILIVVPAIHH-ASIAANIASYISEGQLIILNPGATGGALEFRKILRENG 126 (359)
T ss_dssp H-TTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEESSCCSSHHHHHHHHHHHTT
T ss_pred H-hcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEcCCCchHHHHHHHHHHhcC
Confidence 3 489999999887654 333333 22 345555555 333444456666665
No 189
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.97 E-value=0.004 Score=55.96 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcc-ccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE-FWS 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~-il~ 132 (262)
+.-++|.|+|+|++|+.+++.|.+.|. +|+ +.| .+.+.+....+. |.+. ...++.++ .+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~-~~d----------r~~~~~~~a~~~-G~~~-----~~~~~~~~~~~- 92 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYD----------INPESISKAVDL-GIID-----EGTTSIAKVED- 92 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEE-EEC----------SCHHHHHHHHHT-TSCS-----EEESCTTGGGG-
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEE-EEE----------CCHHHHHHHHHC-CCcc-----hhcCCHHHHhh-
Confidence 455899999999999999999999998 776 667 466666554432 3211 11222445 44
Q ss_pred cCceEEeeCCccCcccc---cchhcc-CceEEEecCCC
Q psy14499 133 IPCDILIPAAIEDQITI---NNANNV-TAKIILEGANG 166 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~ 166 (262)
.+||++|.|.+.+.+.. +..+.+ ...+|+.-+..
T Consensus 93 ~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 93 FSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp GCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred ccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCCC
Confidence 58999999988765432 222223 24477765543
No 190
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.97 E-value=0.002 Score=57.63 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=69.1
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
.-.+.|..|+ .+++++.+.++.|++++|+|.|+ ||+.++++|...|++|+ +++++- -|+
T Consensus 137 ~~~PcTp~gi----~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-v~hs~t-------~~L-------- 196 (288)
T 1b0a_A 137 RLRPCTPRGI----VTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTT-VTHRFT-------KNL-------- 196 (288)
T ss_dssp SSCCHHHHHH----HHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEE-EECSSC-------SCH--------
T ss_pred CCCCCcHHHH----HHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEE-EEeCCc-------hhH--------
Confidence 3467898885 45666788999999999999997 79999999999999987 776321 111
Q ss_pred hcCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCCC
Q psy14499 111 FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGPT 168 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p~ 168 (262)
.+.+ .++||+|-+.. .+.++.+..+ ..-+|++-+-.++
T Consensus 197 -----------------~~~~-~~ADIVI~Avg~p~lI~~~~vk--~GavVIDVgi~r~ 235 (288)
T 1b0a_A 197 -----------------RHHV-ENADLLIVAVGKPGFIPGDWIK--EGAIVIDVGINRL 235 (288)
T ss_dssp -----------------HHHH-HHCSEEEECSCCTTCBCTTTSC--TTCEEEECCCEEC
T ss_pred -----------------HHHh-ccCCEEEECCCCcCcCCHHHcC--CCcEEEEccCCcc
Confidence 1222 36888888876 3577777653 2346666665543
No 191
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.95 E-value=0.0011 Score=59.49 Aligned_cols=131 Identities=9% Similarity=0.072 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-c
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-I 133 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~ 133 (262)
++..||+|+|+|++|+..++.|.+ .++++++|+|. |.++..+..++.+ -...+++.++++. .
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~----------~~~~~~~~a~~~~------~~~~~~~~~~ll~~~ 66 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR----------TLESAQAFANKYH------LPKAYDKLEDMLADE 66 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS----------CSSTTCC---CCC------CSCEESCHHHHHTCT
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHHHHHHHHcC------CCcccCCHHHHhcCC
Confidence 345799999999999999988876 47899999984 3333322222221 1122333556664 5
Q ss_pred CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 134 PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.----..+....++++
T Consensus 67 ~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~ 141 (329)
T 3evn_A 67 SIDVIYVATINQ-DHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLA 141 (329)
T ss_dssp TCCEEEECSCGG-GHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHH
T ss_pred CCCEEEECCCcH-HHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHh
Confidence 799999988753 344444332 445777752222223443 334678887754443332333333444443
No 192
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.95 E-value=0.0029 Score=57.61 Aligned_cols=128 Identities=13% Similarity=0.181 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCHHHHH-HHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 56 IINSKISIQGFGNVGSV-AANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~-~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
++..||+|+|+|.+|+. .+..|.+. ++++++|+|. |.++ ..+ .|++...+++.++++.
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~---~~~------~~~~~~~~~~~~~ll~~ 63 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER----------SKEL---SKE------RYPQASIVRSFKELTED 63 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS----------SCCG---GGT------TCTTSEEESCSHHHHTC
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC----------CHHH---HHH------hCCCCceECCHHHHhcC
Confidence 35579999999999997 67777765 8999999994 3222 111 2334455555677775
Q ss_pred cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccccccchhhHHHHHHHHh
Q psy14499 133 IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~~aN~GGvi~s~~E~~~ 203 (262)
.++|+++-|++. ..+.+.+... ...+++|=.=.....|++++ .+++|+.+...+.----..+....++++
T Consensus 64 ~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 139 (362)
T 3fhl_A 64 PEIDLIVVNTPD-NTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILA 139 (362)
T ss_dssp TTCCEEEECSCG-GGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCh-HHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHH
Confidence 479999999875 3344444332 45588885322223444433 3668887765554433444444445544
No 193
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.94 E-value=0.0055 Score=53.39 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=58.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc-Cc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI-PC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~-~~ 135 (262)
++|.|+|+|++|+.+++.|.+.|. +|+ +.| .+.+.+....+ .|.. ....++.++.+ . ++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d----------~~~~~~~~~~~-~g~~-----~~~~~~~~~~~-~~~a 63 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYD----------INPESISKAVD-LGII-----DEGTTSIAKVE-DFSP 63 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEE-EEC----------SCHHHHHHHHH-TTSC-----SEEESCGGGGG-GTCC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEE-EEe----------CCHHHHHHHHH-CCCc-----ccccCCHHHHh-cCCC
Confidence 489999999999999999999998 776 666 45666544432 2211 01122233444 4 89
Q ss_pred eEEeeCCccCcccccchh----cc-CceEEEecCCCCC
Q psy14499 136 DILIPAAIEDQITINNAN----NV-TAKIILEGANGPT 168 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~----~~-~~kiIve~AN~p~ 168 (262)
|+++.|.+..... +.+. .+ +..+|+..+|.+.
T Consensus 64 DvVilavp~~~~~-~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 64 DFVMLSSPVRTFR-EIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp SEEEECSCHHHHH-HHHHHHHHHSCTTCEEEECCSCCT
T ss_pred CEEEEcCCHHHHH-HHHHHHHhhCCCCcEEEECCCCcH
Confidence 9999998765332 2222 23 3458888888764
No 194
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.91 E-value=0.0066 Score=54.17 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=68.8
Q ss_pred CeEEEEcCCHHHH-HHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCce
Q psy14499 59 SKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 136 (262)
Q Consensus 59 ~~v~IqGfG~VG~-~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~D 136 (262)
.||+|+|+|++|+ ..++.|.+. +.+++ |+| .|.+++.+..++.+. .. ...+ ..+.+..++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d----------~~~~~~~~~a~~~g~-~~----~~~~-~~~~l~~~~D 65 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCT----------RNPKVLGTLATRYRV-SA----TCTD-YRDVLQYGVD 65 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EEC----------SCHHHHHHHHHHTTC-CC----CCSS-TTGGGGGCCS
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEe----------CCHHHHHHHHHHcCC-Cc----cccC-HHHHhhcCCC
Confidence 5899999999998 588888764 78999 999 678877776665431 10 0122 3334456899
Q ss_pred EEeeCCccCcccccchhc-c--CceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccc
Q psy14499 137 ILIPAAIEDQITINNANN-V--TAKIILEGANGPT--T-TEAD---DILRDKGIILAPDV 187 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~-~--~~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~ 187 (262)
+++-|++.. .+.+.+.. + ...+++|- |+ + .+++ +..+++|+.+...+
T Consensus 66 ~V~i~tp~~-~h~~~~~~al~~Gk~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~ 121 (323)
T 1xea_A 66 AVMIHAATD-VHSTLAAFFLHLGIPTFVDK---PLAASAQECENLYELAEKHHQPLYVGF 121 (323)
T ss_dssp EEEECSCGG-GHHHHHHHHHHTTCCEEEES---CSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCch-hHHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEEEee
Confidence 999999754 34444432 2 23477873 43 3 3333 34467888776443
No 195
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.90 E-value=0.0015 Score=48.65 Aligned_cols=42 Identities=19% Similarity=0.383 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCC-CEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g-~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
.+++|+|.|.|.+|+.+++.|.+.| .+|+ ++| .+.+++....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~-~~~----------r~~~~~~~~~ 46 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVT-VAD----------HDLAALAVLN 46 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEE-EEE----------SCHHHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEE-EEe----------CCHHHHHHHH
Confidence 4679999999999999999999999 7766 666 3566655544
No 196
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.89 E-value=0.014 Score=53.22 Aligned_cols=96 Identities=19% Similarity=0.356 Sum_probs=59.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHHh---cCCccC----C-C-----Cce
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF---TRSIKD----F-N-----EGE 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~---~g~~~~----~-~-----~~~ 122 (262)
.||+|.|||.+|+.++|+|.+. ...+++|.|. .|++.+..+.+. .|.+.+ . + +++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~---------~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~ 72 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT---------GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGK 72 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT---------TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CCHHHHHHHhcccccCCCccceeEEecCCeEEECCe
Confidence 4899999999999999999876 5799999883 477766555442 222111 0 1 111
Q ss_pred e---c--CCCccc-c-ccCceEEeeCCccCcccccchhcc---CceEEEecC
Q psy14499 123 K---I--NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAKIILEGA 164 (262)
Q Consensus 123 ~---~--~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~A 164 (262)
. . .+++++ | +.++|++++|++ ...+.+.+..+ .+|.|.=+|
T Consensus 73 ~i~v~~~~dp~~i~w~~~gvDiV~eatg-~~~s~e~a~~~l~~Gak~V~iSa 123 (337)
T 1rm4_O 73 VIKVVSDRNPVNLPWGDMGIDLVIEGTG-VFVDRDGAGKHLQAGAKKVLITA 123 (337)
T ss_dssp EEEEECCSCGGGSCHHHHTCCEEEECSS-SCCBHHHHHHHHHTTCSEEEESS
T ss_pred EEEEEecCChhhCcccccCCCEEEECCC-chhhHHHHHHHHHcCCEEEEECC
Confidence 1 1 113333 3 348999999985 44455555554 466555444
No 197
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.89 E-value=0.0012 Score=62.11 Aligned_cols=129 Identities=11% Similarity=0.093 Sum_probs=82.1
Q ss_pred CCCeEEEEcC----CHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 57 INSKISIQGF----GNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 57 ~~~~v~IqGf----G~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
+..||+|+|+ |.+|...++.|.+. ++++++|+| .|.+++.+..++.+. +....+++.+++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d----------~~~~~~~~~a~~~g~----~~~~~~~~~~~l 84 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS----------PKIETSIATIQRLKL----SNATAFPTLESF 84 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC----------SSHHHHHHHHHHTTC----TTCEEESSHHHH
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEe----------CCHHHHHHHHHHcCC----CcceeeCCHHHH
Confidence 4579999999 99999999999886 789999999 678877776665431 122334445667
Q ss_pred cc-cCceEEeeCCccCcccccchhcc---C------ceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccccccchhh
Q psy14499 131 WS-IPCDILIPAAIEDQITINNANNV---T------AKIILEGANGPT--T-TEAD---DILRDKGIILAPDVITNAGGV 194 (262)
Q Consensus 131 l~-~~~DIlipaa~~~~it~e~a~~~---~------~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~~aN~GGv 194 (262)
+. .++|+++-|++.. .+.+.+... . ..+++|= |+ + .+++ +..+++|+.+...+.----..
T Consensus 85 l~~~~vD~V~i~tp~~-~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~ 160 (438)
T 3btv_A 85 ASSSTIDMIVIAIQVA-SHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTIISLQGRKSPY 160 (438)
T ss_dssp HHCSSCSEEEECSCHH-HHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHH
T ss_pred hcCCCCCEEEEeCCcH-HHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEEEecccccCHH
Confidence 74 5899999999753 333433332 3 3488883 44 3 3343 334678887765443333333
Q ss_pred HHHHHHHHh
Q psy14499 195 IVSYFEWVQ 203 (262)
Q Consensus 195 i~s~~E~~~ 203 (262)
+....++++
T Consensus 161 ~~~~k~~i~ 169 (438)
T 3btv_A 161 ILRAKELIS 169 (438)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444443
No 198
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.89 E-value=0.0033 Score=56.22 Aligned_cols=105 Identities=13% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+..||+|+|+|++|+..++.|.+ .+.++++|+| .|++++.+ .| +. + ..+ +++++ .+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d----------~~~~~~~~----~g-~~-~---~~~---~~l~~~~~ 65 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVR----------RNPAEVPF----EL-QP-F---RVV---SDIEQLES 65 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC----------C-----------CC-TT-S---CEE---SSGGGSSS
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEc----------CCHHHHHH----cC-CC-c---CCH---HHHHhCCC
Confidence 45799999999999999999987 5799999998 34444322 11 11 1 112 22322 58
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCC-CCCCHH---HHHHHHHCCCeEe
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGAN-GPTTTE---ADDILRDKGIILA 184 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN-~p~t~e---a~~~l~~rgi~~i 184 (262)
+|+++.|++... +.+.+... ...+|+|-.- .+...+ ..+..+++|+.++
T Consensus 66 ~DvViiatp~~~-h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 66 VDVALVCSPSRE-VERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp CCEEEECSCHHH-HHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEECCCchh-hHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 999999997533 33433332 4556766221 122222 3344567787654
No 199
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.88 E-value=0.0081 Score=53.93 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC----ceecCCCccccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE----GEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~----~~~~~~~~~il~ 132 (262)
...+|.|+|.|++|..++..|.+.|..|+ +.| .+.+++..+.++...+ ..|+ ....+++.+ .
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~-~~~----------r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~-~- 78 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVI-LWA----------RRKEIVDLINVSHTSP-YVEESKITVRATNDLEE-I- 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHHHHSCBT-TBTTCCCCSEEESCGGG-C-
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHHHhCCcc-cCCCCeeeEEEeCCHHH-h-
Confidence 56899999999999999999999999876 666 3566665555543222 1122 222332444 3
Q ss_pred cCceEEeeCCccCcccccchhcc--CceEEEecCCC
Q psy14499 133 IPCDILIPAAIEDQITINNANNV--TAKIILEGANG 166 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~ 166 (262)
.++|++|-|-.. ....+.+..+ ..++|+...|+
T Consensus 79 ~~aDvVil~vk~-~~~~~v~~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 79 KKEDILVIAIPV-QYIREHLLRLPVKPSMVLNLSKG 113 (335)
T ss_dssp CTTEEEEECSCG-GGHHHHHTTCSSCCSEEEECCCC
T ss_pred cCCCEEEEECCH-HHHHHHHHHhCcCCCEEEEEeCC
Confidence 489999998775 3334444444 45689999986
No 200
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=96.87 E-value=0.03 Score=53.76 Aligned_cols=131 Identities=12% Similarity=0.120 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHHHhC---------CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHH
Q psy14499 37 TGRGVFIIGSKIASKIN---------LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQK 107 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g---------~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~ 107 (262)
.+.|...+++.+++..+ .++++++++|.|.|.+|+++++.|.+.|++|+ +++ -+.+++.+
T Consensus 334 D~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~-i~~----------R~~~~a~~ 402 (523)
T 2o7s_A 334 DCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVV-IAN----------RTYERALE 402 (523)
T ss_dssp HHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CE-EEE----------SSHHHHHH
T ss_pred CHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHH
Confidence 34477777776643222 35788999999999999999999999999876 766 35666666
Q ss_pred HHHhcCCccCCCCceecCCCccccccCceEEeeCCccCcc---cccchhc--c-CceEEEecCCCCC-CHHHHHHHHHCC
Q psy14499 108 YVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIEDQI---TINNANN--V-TAKIILEGANGPT-TTEADDILRDKG 180 (262)
Q Consensus 108 ~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~~i---t~e~a~~--~-~~kiIve~AN~p~-t~ea~~~l~~rg 180 (262)
..++.+. ....+++.+++...++|++|.|+.-..- +..+... + ....+++-.-.|. ||-..+. +++|
T Consensus 403 la~~~~~-----~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a-~~~G 476 (523)
T 2o7s_A 403 LAEAIGG-----KALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREA-EESG 476 (523)
T ss_dssp HHHHTTC------CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHH-HTTT
T ss_pred HHHHcCC-----ceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHH-HHCC
Confidence 5554321 1111221112111358999999864321 1112211 1 3467888755554 6554333 5578
Q ss_pred CeEe
Q psy14499 181 IILA 184 (262)
Q Consensus 181 i~~i 184 (262)
..++
T Consensus 477 ~~~i 480 (523)
T 2o7s_A 477 AITV 480 (523)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 7654
No 201
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.87 E-value=0.00047 Score=61.22 Aligned_cols=118 Identities=14% Similarity=0.216 Sum_probs=71.6
Q ss_pred CCCCeEEEEc-CCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCC-CceecCCCccccc
Q psy14499 56 IINSKISIQG-FGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN-EGEKINDSKEFWS 132 (262)
Q Consensus 56 l~~~~v~IqG-fG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~-~~~~~~~~~~il~ 132 (262)
++-+||+|.| +|.+|+.+++.+.+ .+++++++.|+++.-+ .|.|..++. +.+ +....++.++++.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~--~G~d~gel~----------g~~~gv~v~~dl~~ll~ 72 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ--LGQDAGAFL----------GKQTGVALTDDIERVCA 72 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT--TTSBTTTTT----------TCCCSCBCBCCHHHHHH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc--ccccHHHHh----------CCCCCceecCCHHHHhc
Confidence 3457999999 89999999998876 5899999999754211 244543322 111 2222233445564
Q ss_pred cCceEEeeCCccCcccccchhc---cCceEEEecCCCCCCHHHHHHHHH----CCCeEeccccc
Q psy14499 133 IPCDILIPAAIEDQITINNANN---VTAKIILEGANGPTTTEADDILRD----KGIILAPDVIT 189 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~---~~~kiIve~AN~p~t~ea~~~l~~----rgi~~iPD~~a 189 (262)
++||+|+++.+... .+++.. -+.++|+.-. .++++..+.|++ .++++.|.|..
T Consensus 73 -~~DVVIDfT~p~a~-~~~~~~al~~G~~vVigTT--G~s~~~~~~L~~aa~~~~vv~a~N~s~ 132 (272)
T 4f3y_A 73 -EADYLIDFTLPEGT-LVHLDAALRHDVKLVIGTT--GFSEPQKAQLRAAGEKIALVFSANMSV 132 (272)
T ss_dssp -HCSEEEECSCHHHH-HHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHTTTSEEEECSCCCH
T ss_pred -CCCEEEEcCCHHHH-HHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhccCCEEEECCCCH
Confidence 79999999965433 233332 3556776432 367765444533 45666666644
No 202
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.86 E-value=0.002 Score=59.15 Aligned_cols=85 Identities=24% Similarity=0.223 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCC---Ccccc
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIND---SKEFW 131 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~---~~~il 131 (262)
.+.+++|+|+|+|.+|+.+++.+..+|++|+ +.| .+.+++....+..+.- + .....+ .++.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d----------~~~~~~~~~~~~~g~~--~--~~~~~~~~~l~~~~ 227 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVT-ILD----------VNHKRLQYLDDVFGGR--V--ITLTATEANIKKSV 227 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHTTTS--E--EEEECCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHHhcCce--E--EEecCCHHHHHHHH
Confidence 3788999999999999999999999999877 667 4666655544433210 0 000110 11233
Q ss_pred ccCceEEeeCCccC------cccccchhcc
Q psy14499 132 SIPCDILIPAAIED------QITINNANNV 155 (262)
Q Consensus 132 ~~~~DIlipaa~~~------~it~e~a~~~ 155 (262)
.++|++|.|+... .++.+..+.+
T Consensus 228 -~~~DvVi~~~g~~~~~~~~li~~~~l~~m 256 (369)
T 2eez_A 228 -QHADLLIGAVLVPGAKAPKLVTRDMLSLM 256 (369)
T ss_dssp -HHCSEEEECCC-------CCSCHHHHTTS
T ss_pred -hCCCEEEECCCCCccccchhHHHHHHHhh
Confidence 3799999998643 2455556655
No 203
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.81 E-value=0.0017 Score=59.53 Aligned_cols=32 Identities=19% Similarity=0.492 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDD 90 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~ 90 (262)
.||+|.|||.+|+.+++.|.+. ++.+++|+|.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~ 35 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT 35 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC
Confidence 5899999999999999999876 6999999994
No 204
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.80 E-value=0.0012 Score=60.69 Aligned_cols=122 Identities=17% Similarity=0.181 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
++-++++|+|+|.|.+|+.+++.|.+. ..|+ |+| .+.+++.++.++.+.+. . +....++..+++ .
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~-V~~----------R~~~~a~~la~~~~~~~-~-d~~~~~~l~~ll-~ 76 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVY-IGD----------VNNENLEKVKEFATPLK-V-DASNFDKLVEVM-K 76 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEE-EEE----------SCHHHHHHHTTTSEEEE-C-CTTCHHHHHHHH-T
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEE-EEE----------CCHHHHHHHHhhCCeEE-E-ecCCHHHHHHHH-h
Confidence 445789999999999999999999888 7654 888 57787766654321000 0 000000012333 3
Q ss_pred CceEEeeCCccCcccccchhc-c-CceEEEecCCCCC-CHHHHHHHHHCCCeEeccccccc
Q psy14499 134 PCDILIPAAIEDQITINNANN-V-TAKIILEGANGPT-TTEADDILRDKGIILAPDVITNA 191 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~-~-~~kiIve~AN~p~-t~ea~~~l~~rgi~~iPD~~aN~ 191 (262)
++|++|-|++.. .+.+.+.. + ..+.+++.++.+- +.+..+..+++|+.++|..=...
T Consensus 77 ~~DvVIn~~P~~-~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dP 136 (365)
T 2z2v_A 77 EFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAP 136 (365)
T ss_dssp TCSCEEECCCHH-HHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCBTTT
T ss_pred CCCEEEECCChh-hhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCCCcc
Confidence 899999997643 23222222 1 3456777777544 34556777899999997765443
No 205
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=96.79 E-value=0.016 Score=53.77 Aligned_cols=96 Identities=18% Similarity=0.351 Sum_probs=57.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---------CCcee
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---------NEGEK 123 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---------~~~~~ 123 (262)
.||+|.|||.+|+.+++.|.+. +..+++|.|. .|++.+..+.+ ..|.+.+- .+.+.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~---------~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~ 73 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC---------CCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeE
Confidence 5899999999999999999876 4899999883 36665544443 22222110 01111
Q ss_pred ---cC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 ---IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 ---~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.. +++++ | +.++|++++|+.. ..+.+.+... .+| +|+.+.
T Consensus 74 i~v~~~~dp~~l~w~~~gvDvV~e~TG~-f~s~e~a~~hl~aGakkVVIs~p 124 (380)
T 2d2i_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTGV-FVTAEGASKHIQAGAKKVLITAP 124 (380)
T ss_dssp EEEECCSCGGGCCHHHHTCCEEEECSSS-CCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHCCcccCCCCEEEECCCc-cccHHHHHHHHHcCCcEEEEcCC
Confidence 11 23343 3 2488999999864 3455555554 455 555544
No 206
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.79 E-value=0.00098 Score=60.59 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=57.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcC-Ccc-CCCCc---------eecCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIK-DFNEG---------EKIND 126 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g-~~~-~~~~~---------~~~~~ 126 (262)
.||+|+|||.+|+.+++.|.+. +.++++|+|+ +++.+.+..+..| ++- .|++. ....+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~----------~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d 72 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT----------KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGT 72 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES----------SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC----------CHHHHHHHHHhcCccccccccccceeccCCceEEcCc
Confidence 5899999999999999999875 6899999994 3233333333222 110 01100 11112
Q ss_pred CccccccCceEEeeCCccCcccccchhcc---CceEEEecCC
Q psy14499 127 SKEFWSIPCDILIPAAIEDQITINNANNV---TAKIILEGAN 165 (262)
Q Consensus 127 ~~~il~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN 165 (262)
.++++. ++|+++.|++... +.+.+... .+++|+++..
T Consensus 73 ~~~l~~-~vDvV~~aTp~~~-h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 73 LNDLLE-KVDIIVDATPGGI-GAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp HHHHHT-TCSEEEECCSTTH-HHHHHHHHHHHTCEEEECTTS
T ss_pred HHHhcc-CCCEEEECCCccc-cHHHHHHHHHcCCceEeeccc
Confidence 344554 8999999997543 33333332 6778887654
No 207
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.78 E-value=0.022 Score=51.97 Aligned_cols=96 Identities=18% Similarity=0.361 Sum_probs=58.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC----C-----Cce-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF----N-----EGE- 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~----~-----~~~- 122 (262)
.||+|.|||.+|+.++++|.+. ...+++|.|. .|++.+..+.+ ..|.+.+- . +.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~---------~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~ 73 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC---------CCHHHHHHHhccccccCCCCCcEEEcCCeeeecCce
Confidence 5899999999999999999886 4899999883 36665544433 22222110 0 011
Q ss_pred --ec--CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 --KI--NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 --~~--~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.. .+++++ | +.++|++++|++. ..+.+.+..+ .+| +|+.+.
T Consensus 74 i~v~~~~dp~~l~w~~~~vDvV~e~tg~-~~s~e~a~~~l~~GakkVVId~~ 124 (339)
T 3b1j_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTGV-FVTAEGASKHIQAGAKKVLITAP 124 (339)
T ss_dssp EEEECCSCGGGSCTTTTTCCEEEECSSS-CCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHCcccccCCCEEEECCCc-cccHHHHHHHHHcCCcEEEEeCC
Confidence 11 123343 3 2589999999864 3455555554 455 555544
No 208
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.78 E-value=0.0022 Score=58.53 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=74.0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc--
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-- 132 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-- 132 (262)
+-+.+||+|.|.|.||+.+++.|.+ ...|. ++| .+.+++.+..+....+. . + +.+.+++.+
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~-~~~----------~~~~~~~~~~~~~~~~~-~-d---~~d~~~l~~~~ 75 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVY-IGD----------VNNENLEKVKEFATPLK-V-D---ASNFDKLVEVM 75 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEE-EEE----------SCHHHHHHHTTTSEEEE-C-C---TTCHHHHHHHH
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeE-EEE----------cCHHHHHHHhccCCcEE-E-e---cCCHHHHHHHH
Confidence 3356689999999999999999976 45655 777 67777665543211110 0 1 111222222
Q ss_pred cCceEEeeCCccCcccccchhcc--CceEEEecCCCCC-CHHHHHHHHHCCCeEeccccccchhhHH
Q psy14499 133 IPCDILIPAAIEDQITINNANNV--TAKIILEGANGPT-TTEADDILRDKGIILAPDVITNAGGVIV 196 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~p~-t~ea~~~l~~rgi~~iPD~~aN~GGvi~ 196 (262)
.++|++|-|.+.. .+...++.. ..+.+++.+..+- ..+..+..+++|+.++|+.=.. -|+..
T Consensus 76 ~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~-PG~~~ 140 (365)
T 3abi_A 76 KEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFA-PGLSN 140 (365)
T ss_dssp TTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTT-TBHHH
T ss_pred hCCCEEEEecCCc-ccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCC-CchHH
Confidence 4899999998765 344333332 2346777665543 3455677789999999876443 34443
No 209
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.78 E-value=0.005 Score=58.56 Aligned_cols=129 Identities=11% Similarity=0.108 Sum_probs=83.0
Q ss_pred CCCeEEEEcC----CHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 57 INSKISIQGF----GNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 57 ~~~~v~IqGf----G~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
+..||+|+|+ |.+|+..++.|.+. ++++++|+| .|.++..+..++.+ .+....+++.+++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d----------~~~~~a~~~a~~~g----~~~~~~~~d~~el 103 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN----------PTLKSSLQTIEQLQ----LKHATGFDSLESF 103 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC----------SCHHHHHHHHHHTT----CTTCEEESCHHHH
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEe----------CCHHHHHHHHHHcC----CCcceeeCCHHHH
Confidence 4579999999 99999999999885 789999999 67887777766543 1222334445677
Q ss_pred cc-cCceEEeeCCccCcccccchhcc---C------ceEEEecCCCCC--C-HHHHH---HHHHCC-CeEeccccccchh
Q psy14499 131 WS-IPCDILIPAAIEDQITINNANNV---T------AKIILEGANGPT--T-TEADD---ILRDKG-IILAPDVITNAGG 193 (262)
Q Consensus 131 l~-~~~DIlipaa~~~~it~e~a~~~---~------~kiIve~AN~p~--t-~ea~~---~l~~rg-i~~iPD~~aN~GG 193 (262)
+. .++|+++-|++.. .+.+.+... . ..+++|= |+ + .|+++ ..+++| +.+...+.----.
T Consensus 104 l~~~~vD~V~I~tp~~-~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p 179 (479)
T 2nvw_A 104 AQYKDIDMIVVSVKVP-EHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTIICLQGRKSP 179 (479)
T ss_dssp HHCTTCSEEEECSCHH-HHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCH
T ss_pred hcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCH
Confidence 74 5899999999743 344444332 3 3488874 54 3 34433 346788 7776544444444
Q ss_pred hHHHHHHHHh
Q psy14499 194 VIVSYFEWVQ 203 (262)
Q Consensus 194 vi~s~~E~~~ 203 (262)
.+.-..++++
T Consensus 180 ~~~~~k~~i~ 189 (479)
T 2nvw_A 180 YIVRAKELIS 189 (479)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4433444443
No 210
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.76 E-value=0.0033 Score=59.44 Aligned_cols=120 Identities=13% Similarity=0.174 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc---ccccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK---EFWSI 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~---~il~~ 133 (262)
++++|+|.|.|.+|+.+++.|.+.|++|+ ++| .+.+++.+..++.+.+.... . .+.+.+ +++ .
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~-v~~----------R~~~~a~~la~~~~~~~~~~-~-Dv~d~~~l~~~l-~ 67 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVT-VAC----------RTLESAKKLSAGVQHSTPIS-L-DVNDDAALDAEV-A 67 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEE-EEE----------SSHHHHHHTTTTCTTEEEEE-C-CTTCHHHHHHHH-T
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEE-EEE----------CCHHHHHHHHHhcCCceEEE-e-ecCCHHHHHHHH-c
Confidence 56899999999999999999999999865 777 35565544433222110000 0 011111 233 3
Q ss_pred CceEEeeCCccCcccccchhc-cC--ceEEEecCCCCCCHHHHHHHHHCCCeEeccccccc
Q psy14499 134 PCDILIPAAIEDQITINNANN-VT--AKIILEGANGPTTTEADDILRDKGIILAPDVITNA 191 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~-~~--~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~ 191 (262)
++|++|-|++... +.+.+.. ++ ..++.+....|.+.+..+..+++|+.+++.+-...
T Consensus 68 ~~DvVIn~a~~~~-~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~~p 127 (450)
T 1ff9_A 68 KHDLVISLIPYTF-HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDP 127 (450)
T ss_dssp TSSEEEECCC--C-HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBBTT
T ss_pred CCcEEEECCcccc-chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCCcC
Confidence 8999999997532 2222211 22 34555543333334445666789999887665543
No 211
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.76 E-value=0.082 Score=49.84 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA--GAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D 89 (262)
++|+|+|.|.||..+|..|.+. |.+|+ +.|
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEE
Confidence 5899999999999999999998 78987 667
No 212
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.75 E-value=0.0019 Score=59.52 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=59.1
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCcc--CCCCceecCCCccccc
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIK--DFNEGEKINDSKEFWS 132 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~--~~~~~~~~~~~~~il~ 132 (262)
++.+++|+|+|+|.+|+.+++.+..+|++|+ +.| .+.+++....+..+.-. .+.... + ..+.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~-~~d----------~~~~~l~~~~~~~g~~~~~~~~~~~--~-l~~~l- 229 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVT-VLD----------INIDKLRQLDAEFCGRIHTRYSSAY--E-LEGAV- 229 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHTTTSSEEEECCHH--H-HHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHhcCCeeEeccCCHH--H-HHHHH-
Confidence 4789999999999999999999999999877 667 46666555444332110 000000 1 12333
Q ss_pred cCceEEeeCCcc------CcccccchhccC-ceEEEecC
Q psy14499 133 IPCDILIPAAIE------DQITINNANNVT-AKIILEGA 164 (262)
Q Consensus 133 ~~~DIlipaa~~------~~it~e~a~~~~-~kiIve~A 164 (262)
.++|++|.|+.. ..++.+....++ ..+|+.-+
T Consensus 230 ~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 379999998742 234566666663 22444443
No 213
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.75 E-value=0.042 Score=50.26 Aligned_cols=99 Identities=16% Similarity=0.346 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---C------Ccee-
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---N------EGEK- 123 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~------~~~~- 123 (262)
+..||.|.|||.+|+.++|.+.+.+.+||+|-|. -+|++.+.-+.+ .+|.+.+- . +++.
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~veivainDp--------~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I 77 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKGVKVVAVNDP--------FIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEI 77 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEE
T ss_pred CeeEEEEECCChHHHHHHHHHHhCCCEEEEEeCC--------CCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEE
Confidence 4569999999999999999999889999988773 147776554443 23333210 0 1111
Q ss_pred --c--CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 --I--NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 --~--~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
. .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 78 ~v~~e~dp~~i~W~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkVVIsap 127 (346)
T 3h9e_O 78 SVYQCKEPKQIPWRAVGSPYVVESTG-VYLSIQAASDHISAGAQRVVISAP 127 (346)
T ss_dssp EEECCSSGGGCCGGGGTSCEEEECSS-SCCSHHHHHHHHHTTCSEEEESSC
T ss_pred EEEecCChhhCCcccccccEEEEecc-ccCCHHHHHHHHHcCCCEEEECCC
Confidence 1 013332 2 458999999985 44566665554 453 777654
No 214
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.75 E-value=0.016 Score=53.32 Aligned_cols=98 Identities=19% Similarity=0.329 Sum_probs=60.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHH---HHhcCCccCCC---------Cce--
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKY---VTFTRSIKDFN---------EGE-- 122 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~---~~~~g~~~~~~---------~~~-- 122 (262)
-.||+|.|||.+|+.++|+|.+. ...|++|.|.. .|++.+..+ ...+|.+.+.- +.+
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~--------~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i 88 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPF--------MDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVV 88 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTT--------SCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCC--------CChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEE
Confidence 36999999999999999999886 79999998821 355533332 22233332210 011
Q ss_pred -ecC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 -KIN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 -~~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
... +++++ | +.++|++++|++ ...+.+.+..+ .+| +|+.+.
T Consensus 89 ~v~~~~dp~~i~w~~~~vDvV~eatg-~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 89 KVFQAKDPAEIPWGASGAQIVCESTG-VFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp EEECCSCGGGCCHHHHTCCEEEECSS-SCCSHHHHGGGGTTTCSEEEESSC
T ss_pred EEEecCChHHCCcccCCCCEEEECCC-chhhHHHHHHHHHcCCcEEEEeCC
Confidence 111 23333 2 358999999986 44556666655 353 777664
No 215
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.70 E-value=0.0028 Score=57.07 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=58.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
+..||+|+|+|++|+..++.|.+. +.++++++|.+.. . ... + +...+++.++++ .++
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~-----~-~~~--------------~-gv~~~~d~~~ll-~~~ 59 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRAT-----L-DTK--------------T-PVFDVADVDKHA-DDV 59 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSC-----C-SSS--------------S-CEEEGGGGGGTT-TTC
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHH-----H-hhc--------------C-CCceeCCHHHHh-cCC
Confidence 457999999999999999999876 7899999985311 0 000 1 122233345566 689
Q ss_pred eEEeeCCccCcccccchhc-c--CceEEEecCCCCCCHHH
Q psy14499 136 DILIPAAIEDQITINNANN-V--TAKIILEGANGPTTTEA 172 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~~-~--~~kiIve~AN~p~t~ea 172 (262)
|+++.|+.... +.+.+.. + ...+|+|-.-....++.
T Consensus 60 DvViiatp~~~-h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 60 DVLFLCMGSAT-DIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp SEEEECSCTTT-HHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred CEEEEcCCcHH-HHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 99999997654 3333332 2 34466654333233444
No 216
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.68 E-value=0.024 Score=51.62 Aligned_cols=96 Identities=19% Similarity=0.384 Sum_probs=58.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC----------CCc-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF----------NEG- 121 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~----------~~~- 121 (262)
.||+|.|||.+|+.++|+|.++ ...|++|.|. .|++.+-.+.+ .+|.+.+- .+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~ 71 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL---------TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKE 71 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeE
Confidence 4899999999999999998775 5899999883 26665444432 23332110 010
Q ss_pred -eecC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 122 -EKIN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 122 -~~~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
+... +++++ | +.++|++++|++ ...+.+.++.+ .+| +|+.+.
T Consensus 72 i~v~~~~dp~~l~w~~~~vDvV~~atg-~~~s~e~a~~~l~aGakkvVId~~ 122 (332)
T 1hdg_O 72 IKVFAEPDPSKLPWKDLGVDFVIESTG-VFRNREKAELHLQAGAKKVIITAP 122 (332)
T ss_dssp EEEECCSSGGGSCHHHHTCCEEEECSS-SCCBHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHCcccccCCCEEEECCc-cchhHHHHHHHHHcCCcEEEEeCC
Confidence 1111 13333 2 247999999985 44556666555 453 677654
No 217
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.66 E-value=0.0068 Score=53.15 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=57.4
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
++|.|+|+ |++|+.+++.|.+.|..|+ +.| .+.+.+.+..+ .| + ...+ ..+.+ .+||+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~----------r~~~~~~~~~~-~g-~------~~~~-~~~~~-~~aDv 70 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIE----------IAPEGRDRLQG-MG-I------PLTD-GDGWI-DEADV 70 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EEC----------CSHHHHHHHHH-TT-C------CCCC-SSGGG-GTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHh-cC-C------CcCC-HHHHh-cCCCE
Confidence 58999999 9999999999999999887 767 45666555544 22 1 1112 33444 47999
Q ss_pred EeeCCccCcccccchhc----c-CceEEEecCCCC
Q psy14499 138 LIPAAIEDQITINNANN----V-TAKIILEGANGP 167 (262)
Q Consensus 138 lipaa~~~~it~e~a~~----~-~~kiIve~AN~p 167 (262)
+|.|.+.+.+ .+.... + +.++|+..+++.
T Consensus 71 Vi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 71 VVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp EEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred EEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 9998876542 333322 2 245777766654
No 218
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.64 E-value=0.0041 Score=54.71 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=33.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
++|+|+|.|.+|+.+|+.|.+.|++|+ +.| .+.+.+.+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~-l~d----------~~~~~~~~~~ 44 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVT-AYD----------INTDALDAAK 44 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SSHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEe----------CCHHHHHHHH
Confidence 689999999999999999999999987 777 5666555443
No 219
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.64 E-value=0.0037 Score=49.60 Aligned_cols=108 Identities=9% Similarity=0.087 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCC-HHHHHHHHHhc-CCccCC-CCceecCCCcccc--
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFN-IPKLQKYVTFT-RSIKDF-NEGEKINDSKEFW-- 131 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD-~~~l~~~~~~~-g~~~~~-~~~~~~~~~~~il-- 131 (262)
...+|+|.|+|.+|+.+++.|.+.|..|+ +.| -| .+++.+..+.. ..+.-+ .+. .+++.+.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~-vid----------~~~~~~~~~~~~~~~~~~~~i~gd~---~~~~~l~~a 67 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVT-VIS----------NLPEDDIKQLEQRLGDNADVIPGDS---NDSSVLKKA 67 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------CCCHHHHHHHHHHHCTTCEEEESCT---TSHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEE-EEE----------CCChHHHHHHHHhhcCCCeEEEcCC---CCHHHHHHc
Confidence 45789999999999999999999999988 545 23 33332332211 101000 011 1011111
Q ss_pred -ccCceEEeeCCccCccc---ccchhcc-C-ceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 132 -SIPCDILIPAAIEDQIT---INNANNV-T-AKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 132 -~~~~DIlipaa~~~~it---~e~a~~~-~-~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
-.++|++|-|+..+..| ...++++ . .++|+- +|.| +-.+.|++.|+.
T Consensus 68 ~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~-~~~~---~~~~~l~~~G~~ 120 (153)
T 1id1_A 68 GIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA-VSDS---KNLNKIKMVHPD 120 (153)
T ss_dssp TTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE-CSSG---GGHHHHHTTCCS
T ss_pred ChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE-ECCH---HHHHHHHHcCCC
Confidence 14799999998765444 3445555 2 355553 3443 444567788875
No 220
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.64 E-value=0.0054 Score=54.53 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=64.8
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
.-.+.|.+|+...++ +.+ ++|++++|+|.|+ ||+.+|++|...|++|+ +++++- -|+
T Consensus 130 ~~~PcTp~gv~~lL~----~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt-v~~~~t-------~~L-------- 187 (276)
T 3ngx_A 130 FLVPATPRAVIDIMD----YYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVS-VCHSKT-------KDI-------- 187 (276)
T ss_dssp SSCCHHHHHHHHHHH----HHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECTTC-------SCH--------
T ss_pred CCCCCcHHHHHHHHH----HhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEE-EEeCCc-------ccH--------
Confidence 456799999875544 446 9999999999986 89999999999999977 887421 111
Q ss_pred hcCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCC
Q psy14499 111 FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGP 167 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p 167 (262)
.+.. ..+||+|-+.. .+.++++..+. ..+|++-+-.+
T Consensus 188 -----------------~~~~-~~ADIVI~Avg~p~~I~~~~vk~--GavVIDvgi~~ 225 (276)
T 3ngx_A 188 -----------------GSMT-RSSKIVVVAVGRPGFLNREMVTP--GSVVIDVGINY 225 (276)
T ss_dssp -----------------HHHH-HHSSEEEECSSCTTCBCGGGCCT--TCEEEECCCEE
T ss_pred -----------------HHhh-ccCCEEEECCCCCccccHhhccC--CcEEEEeccCc
Confidence 1222 36788887765 35777766532 33666655443
No 221
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.63 E-value=0.17 Score=48.18 Aligned_cols=32 Identities=38% Similarity=0.370 Sum_probs=28.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CC-EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GA-KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~-~vv~V~D 89 (262)
.-++|+|+|.|.||..+|..|.+. |. .|+ +.|
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D 50 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQ 50 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEE
Confidence 346899999999999999999999 99 988 667
No 222
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.63 E-value=0.011 Score=54.97 Aligned_cols=117 Identities=21% Similarity=0.245 Sum_probs=67.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC-----C----CCc-eecCCCc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD-----F----NEG-EKINDSK 128 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~-----~----~~~-~~~~~~~ 128 (262)
++|+|+|.|.||..+|..|.+ |..|+ +.| .|.+++..+.+..-.+.+ + +.. ...++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d----------~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVD----------ILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EEC----------SCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEE----------CCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 479999999999999999998 99987 567 566665555433211110 0 000 1111112
Q ss_pred cccccCceEEeeCCccCc----------ccccchhc---cC-ceEEE-ecCCCCCC-HHHHHHHHHCCCeEecccc
Q psy14499 129 EFWSIPCDILIPAAIEDQ----------ITINNANN---VT-AKIIL-EGANGPTT-TEADDILRDKGIILAPDVI 188 (262)
Q Consensus 129 ~il~~~~DIlipaa~~~~----------it~e~a~~---~~-~kiIv-e~AN~p~t-~ea~~~l~~rgi~~iPD~~ 188 (262)
+.+ .+||+++-|.++.. ...+.+.. ++ -++|+ +..|.|-+ .+..+.+.++.+.+-|.++
T Consensus 69 ~~~-~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~ 143 (402)
T 1dlj_A 69 AAY-KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL 143 (402)
T ss_dssp HHH-HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC
T ss_pred HHh-cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc
Confidence 223 37999999987653 01111111 32 34555 58888865 3444555555677777665
No 223
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.62 E-value=0.0047 Score=55.06 Aligned_cols=96 Identities=16% Similarity=0.237 Sum_probs=68.5
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHH
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKY 108 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~ 108 (262)
.-.+.|.+|+. +++++.+.+++|++++|+|.|+ ||+-++++|.+. |++|+ +++++- -|
T Consensus 136 ~~~PcTp~gi~----~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVt-v~h~~t-------~~------- 196 (281)
T 2c2x_A 136 APLPCTPRGIV----HLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVT-LCHTGT-------RD------- 196 (281)
T ss_dssp CCCCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEE-EECTTC-------SC-------
T ss_pred CCCCChHHHHH----HHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEE-EEECch-------hH-------
Confidence 34678988864 4556668999999999999997 699999999999 89977 775311 01
Q ss_pred HHhcCCccCCCCceecCCCccccccCceEEeeCCc-cCcccccchhccCceEEEecCCCC
Q psy14499 109 VTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI-EDQITINNANNVTAKIILEGANGP 167 (262)
Q Consensus 109 ~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~-~~~it~e~a~~~~~kiIve~AN~p 167 (262)
..+.+ .++||+|-|.. .+.++.+..+. .-+|++-+-.+
T Consensus 197 ------------------L~~~~-~~ADIVI~Avg~p~~I~~~~vk~--GavVIDVgi~r 235 (281)
T 2c2x_A 197 ------------------LPALT-RQADIVVAAVGVAHLLTADMVRP--GAAVIDVGVSR 235 (281)
T ss_dssp ------------------HHHHH-TTCSEEEECSCCTTCBCGGGSCT--TCEEEECCEEE
T ss_pred ------------------HHHHH-hhCCEEEECCCCCcccCHHHcCC--CcEEEEccCCC
Confidence 11222 47899998876 46788877643 34666666544
No 224
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.61 E-value=0.0044 Score=56.80 Aligned_cols=100 Identities=13% Similarity=0.079 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCce------ecCCCcc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGE------KINDSKE 129 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~------~~~~~~~ 129 (262)
.+.++|+|+|.|++|..+|..|.+.|..|. +.| .|.+.+.++.+.......+|+.+ ..++..+
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~-l~~----------r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~e 95 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVR-LWS----------YESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKA 95 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEE-EEC----------SCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEE-EEe----------CCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHH
Confidence 345799999999999999999999999877 666 46666666655433222223221 1121223
Q ss_pred ccccCceEEeeCCccCcccc---cchhcc-CceEEEecCCCC
Q psy14499 130 FWSIPCDILIPAAIEDQITI---NNANNV-TAKIILEGANGP 167 (262)
Q Consensus 130 il~~~~DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~p 167 (262)
.+ .++|++|.|.+...+.. +..+.+ .-.+|+...|+-
T Consensus 96 a~-~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 96 SL-EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp HH-TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred HH-hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 33 48999999987653321 122223 245788888864
No 225
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.61 E-value=0.0042 Score=56.17 Aligned_cols=42 Identities=24% Similarity=0.325 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
+-++|+|+|.|.+|..+|..|.+.|+.|+ +.| .+.+.+.+..
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~-l~d----------~~~~~~~~~~ 46 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVK-LYD----------IEPRQITGAL 46 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHH
Confidence 34689999999999999999999999987 777 5676655543
No 226
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.60 E-value=0.0036 Score=53.95 Aligned_cols=98 Identities=10% Similarity=0.197 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++++++|+|+|.|.||...++.|.+.|++|+ |.+. + ++ +++.++.++ +.+.-.. ..+. ++ .+ .
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~Vt-Vvap-------~-~~-~~l~~l~~~-~~i~~i~--~~~~-~~-dL-~ 90 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAIT-VVAP-------T-VS-AEINEWEAK-GQLRVKR--KKVG-EE-DL-L 90 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEE-EECS-------S-CC-HHHHHHHHT-TSCEEEC--SCCC-GG-GS-S
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECC-------C-CC-HHHHHHHHc-CCcEEEE--CCCC-Hh-Hh-C
Confidence 47999999999999999999999999999988 5442 2 33 334455443 2221100 0111 12 23 4
Q ss_pred CceEEeeCCccCcccccchhccCceEEEecCCCC
Q psy14499 134 PCDILIPAAIEDQITINNANNVTAKIILEGANGP 167 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~~~kiIve~AN~p 167 (262)
++|++|-|+....+|...+..-+.++.|.-+..|
T Consensus 91 ~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p 124 (223)
T 3dfz_A 91 NVFFIVVATNDQAVNKFVKQHIKNDQLVNMASSF 124 (223)
T ss_dssp SCSEEEECCCCTHHHHHHHHHSCTTCEEEC----
T ss_pred CCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCc
Confidence 7999998876666655444333333444444443
No 227
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.60 E-value=0.0054 Score=55.96 Aligned_cols=94 Identities=13% Similarity=0.243 Sum_probs=56.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC-----------ceecCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-----------GEKIND 126 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~-----------~~~~~~ 126 (262)
.||+|.|||.+|+.+++.|.+. ++.+++|+|. ++........+.+ +.-|.+ ....++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~----------~~~~~~~~a~~~g-~~~~~~~~~~~~~~~~~v~v~~~ 70 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT----------SPNYEAFIAHRRG-IRIYVPQQSIKKFEESGIPVAGT 70 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------SCSHHHHHHHHTT-CCEECCGGGHHHHHTTTCCCCCC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC----------ChHHHHHHHHhcC-cceecCcCHHHHhcccccccccC
Confidence 4899999999999999999874 6899999993 2222222222211 000000 000111
Q ss_pred CccccccCceEEeeCCccCcccccchh---ccCceEEEecCC
Q psy14499 127 SKEFWSIPCDILIPAAIEDQITINNAN---NVTAKIILEGAN 165 (262)
Q Consensus 127 ~~~il~~~~DIlipaa~~~~it~e~a~---~~~~kiIve~AN 165 (262)
.++++ .++|+++.|++.. .+.+.+. +-.+++|.-+++
T Consensus 71 ~e~l~-~~vDvV~~aTp~~-~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 71 VEDLI-KTSDIVVDTTPNG-VGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHH-HHCSEEEECCSTT-HHHHHHHHHHHTTCEEEECTTS
T ss_pred HhHhh-cCCCEEEECCCCc-hhHHHHHHHHHcCCeEEEeCCC
Confidence 12222 3799999998643 3444554 336788888887
No 228
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.60 E-value=0.0057 Score=51.65 Aligned_cols=90 Identities=16% Similarity=0.223 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCce
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 136 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~D 136 (262)
+.++|.|+|+|++|+.+++.|.+.|.+|+ +.| -+.+++.+..+. +.+..+ ..+.+ .++|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~-~~~----------r~~~~~~~~~~~--------g~~~~~-~~~~~-~~~D 85 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVV-VGS----------RNPKRTARLFPS--------AAQVTF-QEEAV-SSPE 85 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEE-EEE----------SSHHHHHHHSBT--------TSEEEE-HHHHT-TSCS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc--------CCceec-HHHHH-hCCC
Confidence 45789999999999999999999999877 566 355555444322 112112 33444 4899
Q ss_pred EEeeCCccCcccccch---hccCceEEEecCCCCC
Q psy14499 137 ILIPAAIEDQITINNA---NNVTAKIILEGANGPT 168 (262)
Q Consensus 137 Ilipaa~~~~it~e~a---~~~~~kiIve~AN~p~ 168 (262)
+++.|.....+ .+.. ..++.++|+.-+|+..
T Consensus 86 vVi~av~~~~~-~~v~~l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 86 VIFVAVFREHY-SSLCSLSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp EEEECSCGGGS-GGGGGGHHHHTTCEEEECCCCCH
T ss_pred EEEECCChHHH-HHHHHHHHhcCCCEEEEeCCCcc
Confidence 99999876433 2221 1225668898888753
No 229
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=96.58 E-value=0.03 Score=51.07 Aligned_cols=96 Identities=20% Similarity=0.344 Sum_probs=59.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC----CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccC---CC------Cce
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA----GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKD---FN------EGE 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~----g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~---~~------~~~ 122 (262)
.||+|.|||.+|+.+++.|.+. ...+|+|.|. .|++-+..+.+ .+|.+.+ +. +++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~---------~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~ 72 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL---------GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGD 72 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC---------CCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCE
Confidence 4899999999999999999876 6899999993 36765544433 2222211 00 111
Q ss_pred e---cC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 K---IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 ~---~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
. .. +++++ | +.++|++++|+. ...+.+.+... .|| +|+.+.
T Consensus 73 ~i~v~~~~dp~~~~w~~~gvDiV~estG-~f~s~e~a~~h~~aGakkVviSap 124 (335)
T 1obf_O 73 KIRVDANRNPAQLPWGALKVDVVLECTG-FFTTKEKAGAHIKGGAKKVIISAP 124 (335)
T ss_dssp EEEEECCSCGGGSCTTTTTCSEEEECSS-SCCSHHHHHHHHHHTCSEEEESSC
T ss_pred EEEEEEcCCcccCCccccCCCEEEEccC-ccccHHHHHHHHHcCCCEEEECCc
Confidence 1 11 12232 3 358999999985 45566666655 565 666543
No 230
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.58 E-value=0.009 Score=54.00 Aligned_cols=127 Identities=15% Similarity=0.142 Sum_probs=73.6
Q ss_pred CeEEEEcCCHHHH-HHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCc
Q psy14499 59 SKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~-~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~ 135 (262)
.||+|+|+|.+|+ ..+..|.+. ++++++|+|++ ..+++ .++.+ .++...+++.++++. .++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~~~---a~~~~----~~~~~~~~~~~~ll~~~~~ 66 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNEKA---AAPFK----EKGVNFTADLNELLTDPEI 66 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCHHH---HHHHH----TTTCEEESCTHHHHSCTTC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHHHH---HHhhC----CCCCeEECCHHHHhcCCCC
Confidence 6899999999998 577777664 89999999954 11222 22211 123444555677775 479
Q ss_pred eEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHHHHHH
Q psy14499 136 DILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSYFEWV 202 (262)
Q Consensus 136 DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~ 202 (262)
|+++-|++. ..+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.---...+....+++
T Consensus 67 D~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 138 (349)
T 3i23_A 67 ELITICTPA-HTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVV 138 (349)
T ss_dssp CEEEECSCG-GGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH
T ss_pred CEEEEeCCc-HHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH
Confidence 999999975 3444444433 444777532111124443 33467888776444333333333333443
No 231
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.56 E-value=0.016 Score=53.93 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCH---HHHHHHHHHHHCC-CEEEE-EeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 56 IINSKISIQGFGN---VGSVAANLFFKAG-AKIVA-IQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 56 l~~~~v~IqGfG~---VG~~~a~~L~~~g-~~vv~-V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
++..||+|+|+|. +|+.-+..+...+ +++++ |+| .|+++..+..++.+- +....+++.+++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----------~~~~~a~~~a~~~g~----~~~~~~~~~~~l 100 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALS----------STPEKAEASGRELGL----DPSRVYSDFKEM 100 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECC----------SSHHHHHHHHHHHTC----CGGGBCSCHHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeC----------CCHHHHHHHHHHcCC----CcccccCCHHHH
Confidence 5678999999999 9998888777664 78886 889 688887777666531 111233435667
Q ss_pred cc------cCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHH---HHHHCCCeEeccccccchhhHHHH
Q psy14499 131 WS------IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADD---ILRDKGIILAPDVITNAGGVIVSY 198 (262)
Q Consensus 131 l~------~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~---~l~~rgi~~iPD~~aN~GGvi~s~ 198 (262)
+. -++|+++-|++.. .+.+.+... ...+++|=.=.....++++ ..+++|+.+.-.+.----..+...
T Consensus 101 l~~~~~~~~~vD~V~I~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~ 179 (417)
T 3v5n_A 101 AIREAKLKNGIEAVAIVTPNH-VHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQA 179 (417)
T ss_dssp HHHHHHCTTCCSEEEECSCTT-SHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHH
T ss_pred HhcccccCCCCcEEEECCCcH-HHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHH
Confidence 64 3699999988754 445544443 4458888422222244443 346788877655554444444444
Q ss_pred HHHHh
Q psy14499 199 FEWVQ 203 (262)
Q Consensus 199 ~E~~~ 203 (262)
.++++
T Consensus 180 k~~i~ 184 (417)
T 3v5n_A 180 REMIE 184 (417)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55544
No 232
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.54 E-value=0.0087 Score=53.90 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=31.5
Q ss_pred CCCCCeEEEEcCCHHHH-HHHHHHHHC-CCEEEEEeCCC
Q psy14499 55 NIINSKISIQGFGNVGS-VAANLFFKA-GAKIVAIQDDK 91 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~-~~a~~L~~~-g~~vv~V~D~~ 91 (262)
+++..||+|+|+|.+|+ ..++.|.+. ++++++|+|.+
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~ 60 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH 60 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence 45678999999999998 678888774 89999999964
No 233
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.52 E-value=0.026 Score=51.39 Aligned_cols=96 Identities=22% Similarity=0.363 Sum_probs=59.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccC----------CCCc--e
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKD----------FNEG--E 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~----------~~~~--~ 122 (262)
.||+|.|||.+|+.+.|+|.+. ...|++|.|. .|++.+..+.+ .+|.+.+ +.+. +
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~---------~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~ 72 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL---------TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEII 72 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC---------CCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEE
Confidence 4899999999999999999876 6899999883 25555444442 2222210 0011 1
Q ss_pred ec-C-CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 KI-N-DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 ~~-~-~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.. + +++++ | +.++|++++|++ ...+.+.++.+ .+| +|+.+.
T Consensus 73 v~~~~dp~~i~w~~~~vDvV~~atg-~~~s~e~a~~~l~~Gak~vVId~p 121 (334)
T 3cmc_O 73 VKAERDPENLAWGEIGVDIVVESTG-RFTKREDAAKHLEAGAKKVIISAP 121 (334)
T ss_dssp EECCSSGGGCCTGGGTCCEEEECSS-SCCBHHHHTHHHHTTCSEEEESSC
T ss_pred EEecCChhhcCcccCccCEEEECCC-chhhHHHHHHHHHCCCCEEEEeCC
Confidence 11 1 23333 3 248999999985 44566666655 453 677654
No 234
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.52 E-value=0.0066 Score=55.08 Aligned_cols=141 Identities=13% Similarity=0.145 Sum_probs=84.6
Q ss_pred CCCChhHHHHHHHHHHH--HH---HhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCCCc-eeeCCC-CCCHH
Q psy14499 32 GRQKATGRGVFIIGSKI--AS---KINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDDKT-TIYNPN-GFNIP 103 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~--~~---~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~~G-~i~~~~-GlD~~ 103 (262)
.-.+.|.+|++..++.. .. ..|.++.+++++|+|.|+ ||+.+|++|.+.|++|+ |+|.+. .++... -+-
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVt-v~nR~~~~l~~ra~~la-- 222 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVY-SVDVNNIQKFTRGESLK-- 222 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEE-EECSSEEEEEESCCCSS--
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEE-EEeCchHHHHhHHHHHh--
Confidence 45678998885444331 00 057899999999999996 69999999999999966 888643 222211 010
Q ss_pred HHHHHHHhcCCccCCCCceec-----CCCccccccCceEEeeCCcc-Cc-ccccchhccCceEEEecCCCC-CCHHHHHH
Q psy14499 104 KLQKYVTFTRSIKDFNEGEKI-----NDSKEFWSIPCDILIPAAIE-DQ-ITINNANNVTAKIILEGANGP-TTTEADDI 175 (262)
Q Consensus 104 ~l~~~~~~~g~~~~~~~~~~~-----~~~~~il~~~~DIlipaa~~-~~-it~e~a~~~~~kiIve~AN~p-~t~ea~~~ 175 (262)
.. ....+.+ ++..+.+ .++||+|-|+.. +. ++.+..+. ..+|++-+-.+ +.+++
T Consensus 223 ------~~------~~~~t~~~~t~~~~L~e~l-~~ADIVIsAtg~p~~vI~~e~vk~--GavVIDVgi~rD~d~~v--- 284 (320)
T 1edz_A 223 ------LN------KHHVEDLGEYSEDLLKKCS-LDSDVVITGVPSENYKFPTEYIKE--GAVCINFACTKNFSDDV--- 284 (320)
T ss_dssp ------CC------CCEEEEEEECCHHHHHHHH-HHCSEEEECCCCTTCCBCTTTSCT--TEEEEECSSSCCBCGGG---
T ss_pred ------hh------cccccccccccHhHHHHHh-ccCCEEEECCCCCcceeCHHHcCC--CeEEEEcCCCcccchhH---
Confidence 00 0001111 1011222 489999999874 44 88887643 45777777655 33443
Q ss_pred HHHCCCeEeccccccchhhHHHH
Q psy14499 176 LRDKGIILAPDVITNAGGVIVSY 198 (262)
Q Consensus 176 l~~rgi~~iPD~~aN~GGvi~s~ 198 (262)
.++--.+.|- .|.++.+.
T Consensus 285 -~~~a~~itPv----VGpmT~a~ 302 (320)
T 1edz_A 285 -KEKASLYVPM----TGKVTIAM 302 (320)
T ss_dssp -GTTEEEEESC----CHHHHHHH
T ss_pred -HhhCCeeCCC----ccHHHHHH
Confidence 2333345664 57666543
No 235
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.51 E-value=0.0099 Score=53.15 Aligned_cols=74 Identities=22% Similarity=0.243 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-CCceecCCCccccccCc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWSIPC 135 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-~~~~~~~~~~~il~~~~ 135 (262)
..++|.|+|.|.+|..+|..|. .|+.|+ +.| .+++.+.+..+.. .... .+.+..++.++ + .+|
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~-v~d----------~~~~~~~~~~~~l--~~~~~~~i~~~~~~~~-~-~~a 74 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVV-LQD----------VSEKALEAAREQI--PEELLSKIEFTTTLEK-V-KDC 74 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEE-EEC----------SCHHHHHHHHHHS--CGGGGGGEEEESSCTT-G-GGC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEE-EEE----------CCHHHHHHHHHHH--HHHHhCCeEEeCCHHH-H-cCC
Confidence 4689999999999999999999 999987 777 6777777666540 0000 01222222333 3 588
Q ss_pred eEEeeCCccCc
Q psy14499 136 DILIPAAIEDQ 146 (262)
Q Consensus 136 DIlipaa~~~~ 146 (262)
|++|+|-+++.
T Consensus 75 DlVieavpe~~ 85 (293)
T 1zej_A 75 DIVMEAVFEDL 85 (293)
T ss_dssp SEEEECCCSCH
T ss_pred CEEEEcCcCCH
Confidence 99998877654
No 236
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.0024 Score=60.75 Aligned_cols=125 Identities=12% Similarity=0.155 Sum_probs=68.9
Q ss_pred hCCCCCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCc--
Q psy14499 52 INLNIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSK-- 128 (262)
Q Consensus 52 ~g~~l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~-- 128 (262)
.+.++++++|+|.|.|.+|+.+++.|.+. +.+|+ |+| -+.+++.++.+..+ +... .. .+.+.+
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~-v~~----------R~~~ka~~la~~~~-~~~~-~~-D~~d~~~l 82 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVT-VAC----------RTLANAQALAKPSG-SKAI-SL-DVTDDSAL 82 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEE-EEE----------SSHHHHHHHHGGGT-CEEE-EC-CTTCHHHH
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEE-EEE----------CCHHHHHHHHHhcC-CcEE-EE-ecCCHHHH
Confidence 45678899999999999999999999988 67755 777 35666666554321 1100 00 011111
Q ss_pred -cccccCceEEeeCCccCcccccchhc-cC-ceEEEecCC-CCCCHHHHHHHHHCCCeEeccccccch
Q psy14499 129 -EFWSIPCDILIPAAIEDQITINNANN-VT-AKIILEGAN-GPTTTEADDILRDKGIILAPDVITNAG 192 (262)
Q Consensus 129 -~il~~~~DIlipaa~~~~it~e~a~~-~~-~kiIve~AN-~p~t~ea~~~l~~rgi~~iPD~~aN~G 192 (262)
+++ .++|++|-|++... +...+.. ++ .+.++...- .|.+.+..+..+++|+.+++..-.+.|
T Consensus 83 ~~~l-~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG 148 (467)
T 2axq_A 83 DKVL-ADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPG 148 (467)
T ss_dssp HHHH-HTSSEEEECSCGGG-HHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTTB
T ss_pred HHHH-cCCCEEEECCchhh-hHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCcc
Confidence 223 38999999987542 2221111 11 234444322 232333345567889998877755443
No 237
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=96.49 E-value=0.021 Score=52.38 Aligned_cols=44 Identities=32% Similarity=0.500 Sum_probs=35.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
+..||+|.|||.||+.+.+.|.+....||+|-|. .|++.+.-+.
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl---------~d~~~~a~ll 63 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFERGIDIVAINDL---------TDPKTLAHLL 63 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS---------SCHHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC---------CCHHHhhhhh
Confidence 4589999999999999999999889999999884 4666654444
No 238
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.48 E-value=0.0086 Score=53.55 Aligned_cols=111 Identities=15% Similarity=0.115 Sum_probs=68.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc------
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW------ 131 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il------ 131 (262)
+||+|+|+ |.+|+..++.|.+.+.++++|+|. +.++ ....+ .|++...+++.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~----------~~~~-~~~~~------~~~~~~~~~~~~~ll~~~~~l 66 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP----------ATNV-GLVDS------FFPEAEFFTEPEAFEAYLEDL 66 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS----------SCCC-GGGGG------TCTTCEEESCHHHHHHHHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC----------CHHH-HHHHh------hCCCCceeCCHHHHHHHhhhh
Confidence 69999999 789999999999999999999994 2221 01111 233444444345555
Q ss_pred ---ccCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccc
Q psy14499 132 ---SIPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDV 187 (262)
Q Consensus 132 ---~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~ 187 (262)
+.++|+++-|++. ..+.+.+... ...+++|=.=.....|++++ .+++|+.+...+
T Consensus 67 ~~~~~~vD~V~I~tP~-~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~ 130 (312)
T 3o9z_A 67 RDRGEGVDYLSIASPN-HLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVL 130 (312)
T ss_dssp HHTTCCCSEEEECSCG-GGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECC
T ss_pred cccCCCCcEEEECCCc-hhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 3578998888864 3455444443 44577774322223455443 356777665433
No 239
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.48 E-value=0.011 Score=54.41 Aligned_cols=133 Identities=11% Similarity=0.040 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCH---HHHHHHHHHHHC-CCEEEE-EeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 56 IINSKISIQGFGN---VGSVAANLFFKA-GAKIVA-IQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 56 l~~~~v~IqGfG~---VG~~~a~~L~~~-g~~vv~-V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
++..||+|+|+|. +|+.-+..+... ++++++ |+| .|+++..+..++.+- +....+++.+++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d----------~~~~~a~~~a~~~g~----~~~~~~~~~~~l 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFD----------IDPIRGSAFGEQLGV----DSERCYADYLSM 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECC----------SSHHHHHHHHHHTTC----CGGGBCSSHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeC----------CCHHHHHHHHHHhCC----CcceeeCCHHHH
Confidence 5678999999999 999888877665 489998 888 688887777666531 111233435566
Q ss_pred ccc------CceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHH---HHHHHCCCeEeccccccchhhHHHH
Q psy14499 131 WSI------PCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEAD---DILRDKGIILAPDVITNAGGVIVSY 198 (262)
Q Consensus 131 l~~------~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~ 198 (262)
+.. ++|+++-|++.. .+.+.+... ...+++|=.=.....+++ +..+++|+.+...+.-.--..+...
T Consensus 76 l~~~~~~~~~vD~V~i~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~ 154 (398)
T 3dty_A 76 FEQEARRADGIQAVSIATPNG-THYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQA 154 (398)
T ss_dssp HHHHTTCTTCCSEEEEESCGG-GHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHH
T ss_pred HhcccccCCCCCEEEECCCcH-HHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHH
Confidence 642 599999888754 444444433 445777642222224444 3447788877655544444444444
Q ss_pred HHHHh
Q psy14499 199 FEWVQ 203 (262)
Q Consensus 199 ~E~~~ 203 (262)
.++++
T Consensus 155 k~~i~ 159 (398)
T 3dty_A 155 REMIA 159 (398)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 45544
No 240
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.48 E-value=0.0067 Score=54.39 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCC----CEEEEEeCCCceeeCCCCCCHH--HHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAG----AKIVAIQDDKTTIYNPNGFNIP--KLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g----~~vv~V~D~~G~i~~~~GlD~~--~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
+.++|.|+|.|++|..++..|.+.| ..|+ +.|+ +.+ .+.++.+ .| ....+++.+.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~-v~~r----------~~~~~~~~~l~~-~G-------~~~~~~~~e~ 81 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIM-ASSP----------DMDLATVSALRK-MG-------VKLTPHNKET 81 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEE-EECS----------CTTSHHHHHHHH-HT-------CEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEE-EECC----------CccHHHHHHHHH-cC-------CEEeCChHHH
Confidence 4568999999999999999999999 5665 6662 222 3333332 22 2222213333
Q ss_pred cccCceEEeeCCccCcccc---cchhccC-ceEEEecCCCCCCHHHHHHHHH
Q psy14499 131 WSIPCDILIPAAIEDQITI---NNANNVT-AKIILEGANGPTTTEADDILRD 178 (262)
Q Consensus 131 l~~~~DIlipaa~~~~it~---e~a~~~~-~kiIve~AN~p~t~ea~~~l~~ 178 (262)
. .+||++|.|.....+.. +..+.++ .++|+.-+|+-...+..+.|.+
T Consensus 82 ~-~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 82 V-QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp H-HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred h-ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 3 47999999987543321 1222232 5689998886544444556654
No 241
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.47 E-value=0.0091 Score=53.55 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=76.1
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc------
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW------ 131 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il------ 131 (262)
+||+|+|+ |.+|...++.|.+.+.++++|+|.+ .+. ....+ .|++...+++.++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~----------~~~-~~~~~------~~~~~~~~~~~~~ll~~~~~l 66 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDIN----------DSV-GIIDS------ISPQSEFFTEFEFFLDHASNL 66 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSS----------CCC-GGGGG------TCTTCEEESSHHHHHHHHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCC----------HHH-HHHHh------hCCCCcEECCHHHHHHhhhhh
Confidence 69999999 7899999999999999999999942 221 01111 234444454345555
Q ss_pred ----ccCceEEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCeEeccccccchhhHHHHHHH
Q psy14499 132 ----SIPCDILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGIILAPDVITNAGGVIVSYFEW 201 (262)
Q Consensus 132 ----~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~~iPD~~aN~GGvi~s~~E~ 201 (262)
+.++|+++-|++. ..+.+.+... ...+++|=.=.....|++++ .+++|+.+...+----...+....++
T Consensus 67 ~~~~~~~vD~V~I~tP~-~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~ 145 (318)
T 3oa2_A 67 KRDSATALDYVSICSPN-YLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDK 145 (318)
T ss_dssp TTSTTTSCCEEEECSCG-GGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHH
T ss_pred hhccCCCCcEEEECCCc-HHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHH
Confidence 4678999988864 4455544443 45577775322223444433 36678776544444333444444444
Q ss_pred Hh
Q psy14499 202 VQ 203 (262)
Q Consensus 202 ~~ 203 (262)
++
T Consensus 146 i~ 147 (318)
T 3oa2_A 146 VA 147 (318)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 242
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.46 E-value=0.0086 Score=52.43 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=64.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC-----ceecCCCccccc-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-----GEKINDSKEFWS- 132 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~-----~~~~~~~~~il~- 132 (262)
++|.|+|.|++|..++..|.+.|..|+ +.| .+.+.+.++.+..-.+...++ ....+ ..++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~----------r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 71 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVT-LID----------QWPAHIEAIRKNGLIADFNGEEVVANLPIFS-PEEIDHQ 71 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHHCEEEEETTEEEEECCCEEC-GGGCCTT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEE-EEE----------CCHHHHHHHHhCCEEEEeCCCeeEecceeec-chhhccc
Confidence 589999999999999999999999877 666 355565555443211111110 01111 223332
Q ss_pred -cCceEEeeCCccCcccccchh----ccC-ceEEEecCCCCCC-HHHHHHHHHC
Q psy14499 133 -IPCDILIPAAIEDQITINNAN----NVT-AKIILEGANGPTT-TEADDILRDK 179 (262)
Q Consensus 133 -~~~DIlipaa~~~~it~e~a~----~~~-~kiIve~AN~p~t-~ea~~~l~~r 179 (262)
.++|++|-|.....+ .+... .++ .++|+.-.|+.-+ ....+.+.+.
T Consensus 72 ~~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 72 NEQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp SCCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred CCCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 289999999876533 33222 232 4688888887654 3333444333
No 243
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.46 E-value=0.0012 Score=62.76 Aligned_cols=95 Identities=18% Similarity=0.168 Sum_probs=62.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc-c---c
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW-S---I 133 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il-~---~ 133 (262)
.++|+|.|+|.||+.+|+.|.+.|..|+ |.| -|++.+.++.++.+-..=+.+++ ..++| + .
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~-vId----------~d~~~~~~~~~~~~~~~i~Gd~~----~~~~L~~Agi~ 67 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDIT-IVD----------KDGDRLRELQDKYDLRVVNGHAS----HPDVLHEAGAQ 67 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEE-EEE----------SCHHHHHHHHHHSSCEEEESCTT----CHHHHHHHTTT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHHhcCcEEEEEcCC----CHHHHHhcCCC
Confidence 5799999999999999999999999988 878 58888877766532100000111 12233 1 4
Q ss_pred CceEEeeCCccCcc---cccchhcc-CceEEEecCCCC
Q psy14499 134 PCDILIPAAIEDQI---TINNANNV-TAKIILEGANGP 167 (262)
Q Consensus 134 ~~DIlipaa~~~~i---t~e~a~~~-~~kiIve~AN~p 167 (262)
+||+||-++..+.. ....|+++ ..+-++.=.|.|
T Consensus 68 ~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~~~~ 105 (461)
T 4g65_A 68 DADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSP 105 (461)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEECCCH
T ss_pred cCCEEEEEcCChHHHHHHHHHHHHhcCCccceeEeccc
Confidence 79999998876433 34556665 444444444444
No 244
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.45 E-value=0.028 Score=51.25 Aligned_cols=97 Identities=19% Similarity=0.333 Sum_probs=60.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHH---HhcCCcc-CC----CC------ce-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYV---TFTRSIK-DF----NE------GE- 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~---~~~g~~~-~~----~~------~~- 122 (262)
.||+|.|||.+|+.+++.|.+. +.++++|.|+. .|++.+..+. ..+|.+. +. .+ .+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~--------~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~ 75 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS--------SCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCC--------CCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeE
Confidence 5899999999999999999875 78999998820 2555433332 2333322 10 00 01
Q ss_pred --ecC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cc-eEEEecC
Q psy14499 123 --KIN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TA-KIILEGA 164 (262)
Q Consensus 123 --~~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~-kiIve~A 164 (262)
.+. +++++ | ..++|++++|++. ..+.+.+... .+ |+|++..
T Consensus 76 i~v~~~~dp~~l~w~~~~vDvV~eaTg~-~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 76 VTVFGIRNPDEIPWAEAGAEYVVESTGV-FTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEECCSCGGGCCHHHHTCSEEEECSSS-CCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHccccccCCCEEEECCCc-hhhHHHHHHHHHcCCCEEEEecC
Confidence 121 24444 3 3589999999864 4455555554 45 3888775
No 245
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.40 E-value=0.012 Score=55.04 Aligned_cols=75 Identities=21% Similarity=0.179 Sum_probs=48.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCC------------C-ceecC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN------------E-GEKIN 125 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~------------~-~~~~~ 125 (262)
++|+|+|.|.||..+|..|.+.|..|+ +.| .|.+++..+.+..-.+. .| + ....+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d----------~~~~~~~~l~~~~~~i~-e~~l~~~~~~~~~~g~l~~t~ 68 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVD----------VSSTKIDLINQGKSPIV-EPGLEALLQQGRQTGRLSGTT 68 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHTTCCSSC-CTTHHHHHHHHHHTTCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHhCCCCCcC-CCCHHHHHHhhcccCceEEeC
Confidence 479999999999999999999999987 667 56666655543211110 01 1 11112
Q ss_pred CCccccccCceEEeeCCccCc
Q psy14499 126 DSKEFWSIPCDILIPAAIEDQ 146 (262)
Q Consensus 126 ~~~~il~~~~DIlipaa~~~~ 146 (262)
+.++.+ .+||+++-|.++..
T Consensus 69 ~~~~~~-~~aDvviiaVptp~ 88 (436)
T 1mv8_A 69 DFKKAV-LDSDVSFICVGTPS 88 (436)
T ss_dssp CHHHHH-HTCSEEEECCCCCB
T ss_pred CHHHHh-ccCCEEEEEcCCCc
Confidence 122233 48999999987654
No 246
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=96.38 E-value=0.049 Score=49.62 Aligned_cols=97 Identities=12% Similarity=0.274 Sum_probs=59.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHH---C-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---------CCce
Q psy14499 59 SKISIQGFGNVGSVAANLFFK---A-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---------NEGE 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~---~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---------~~~~ 122 (262)
.||+|.|||.+|+.++++|.+ . ...+++|.|. .|++.+..+.+ .+|.+.+- .+.+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~ 73 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL---------ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDD 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC---------CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCE
Confidence 589999999999999999987 4 7899999883 36665544443 22322210 0011
Q ss_pred e---c--CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecCC
Q psy14499 123 K---I--NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGAN 165 (262)
Q Consensus 123 ~---~--~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~AN 165 (262)
. . .+++++ | +.++|++++|++. ..+.+.+..+ .+| +|+.+.-
T Consensus 74 ~i~v~~~~dp~~l~~~~~~vDvV~e~tg~-~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 74 AIRVLHERSLQSLPWRELGVDVVLDCTGV-YGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp EEEEECCSSGGGCCHHHHTCSEEEECSSS-CCSHHHHHHHHHTTCSEEEESSCC
T ss_pred EEEEEecCChHHCcccccCCCEEEECCCc-cccHHHHHHHHHcCCCEEEEeccc
Confidence 1 1 113333 3 2489999999864 3455555554 455 6666543
No 247
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=96.38 E-value=0.034 Score=49.93 Aligned_cols=54 Identities=22% Similarity=0.314 Sum_probs=45.5
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCH-HHHHHHHHHHHCCCEEEEEeCC
Q psy14499 32 GRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGN-VGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 32 ~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~-VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
.-.+.|.+|+ .+++++.+.+++|++++|+|-++ ||+-++.+|.+.+++|+ +|.+
T Consensus 157 ~~~PcTp~gv----~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVT-i~Hs 211 (303)
T 4b4u_A 157 AYGSATPAGI----MTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVT-ICHS 211 (303)
T ss_dssp CCCCHHHHHH----HHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-EECT
T ss_pred cccCccHHHH----HHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEE-EecC
Confidence 3456888876 45677789999999999999765 89999999999999987 7764
No 248
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=96.37 E-value=0.022 Score=52.12 Aligned_cols=96 Identities=25% Similarity=0.389 Sum_probs=59.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccC---CC------Ccee--
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKD---FN------EGEK-- 123 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~---~~------~~~~-- 123 (262)
.||+|.|||.+|+.+++.|.+. ...+|+|.|. .|++-+..+.+ .+|.+.+ +. +++.
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~---------~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~ 73 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL---------TDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIK 73 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC---------CChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEE
Confidence 5899999999999999998876 7999999983 37765444443 2222111 00 0111
Q ss_pred -cC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 -IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 -~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.. +++++ | +.++|++++|+. ...+.+.+... .|| +|+.++
T Consensus 74 v~~~~dp~~~~w~~~gvDiV~estG-~~~s~e~a~~hl~aGakkVvisap 122 (342)
T 2ep7_A 74 VFAQKDPSQIPWGDLGVDVVIEATG-VFRDRENASKHLQGGAKKVIITAP 122 (342)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSS-SCCBHHHHTTTGGGTCSEEEESSC
T ss_pred EEEcCChhhCCccccCCCEEEECCC-chhhhhhhHHHHhcCCCEEEecCC
Confidence 11 12222 2 348999999985 44566666555 565 666654
No 249
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.36 E-value=0.007 Score=54.58 Aligned_cols=123 Identities=12% Similarity=0.176 Sum_probs=73.4
Q ss_pred CeEEEEcCCHHHHH-HHH-HHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 59 SKISIQGFGNVGSV-AAN-LFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 59 ~~v~IqGfG~VG~~-~a~-~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
.||+|+|+|.+|+. .+. .|.. .++++++|+|. |+++. +..+ .+++...+++.++++. .+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~----------~~~~~-~~~~------~~~~~~~~~~~~~ll~~~~ 65 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR----------HAKPE-EQAP------IYSHIHFTSDLDEVLNDPD 65 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS----------SCCGG-GGSG------GGTTCEEESCTHHHHTCTT
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC----------CHhHH-HHHH------hcCCCceECCHHHHhcCCC
Confidence 68999999999985 566 4343 58999999993 33322 1111 2334455555677775 47
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHH---HHHHHCCCeEeccccccchhhHHHHHHHH
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEAD---DILRDKGIILAPDVITNAGGVIVSYFEWV 202 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~---~~l~~rgi~~iPD~~aN~GGvi~s~~E~~ 202 (262)
+|+++-|++.. .+.+.+... ...+++| -|+ + .+++ +..+++|+.+...+.----..+....+++
T Consensus 66 ~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 138 (345)
T 3f4l_A 66 VKLVVVCTHAD-SHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAI 138 (345)
T ss_dssp EEEEEECSCGG-GHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH
T ss_pred CCEEEEcCChH-HHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHH
Confidence 99999999654 444444433 4558888 444 3 4443 33467888776444333233333333444
No 250
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.34 E-value=0.009 Score=52.85 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=27.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++|+|+|.|++|..+|..|.+.|+.|+ +.|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~-~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVV-LVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEE-EEE
Confidence 589999999999999999999999987 777
No 251
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.31 E-value=0.0067 Score=55.47 Aligned_cols=93 Identities=27% Similarity=0.339 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceec-CCCccccc--
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKI-NDSKEFWS-- 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~-~~~~~il~-- 132 (262)
+++.+|+|+|.|.+|+.+++.+...|++|+ ++| .+.+++....+..+.. ...+ .+.+++.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~-v~d----------r~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQ-IFD----------INVERLSYLETLFGSR-----VELLYSNSAEIETAV 228 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHHGGG-----SEEEECCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEe----------CCHHHHHHHHHhhCce-----eEeeeCCHHHHHHHH
Confidence 667999999999999999999999999876 777 4666665554432110 0011 10111211
Q ss_pred cCceEEeeCCccCc------ccccchhccC-ceEEEecC
Q psy14499 133 IPCDILIPAAIEDQ------ITINNANNVT-AKIILEGA 164 (262)
Q Consensus 133 ~~~DIlipaa~~~~------it~e~a~~~~-~kiIve~A 164 (262)
.++|++|.|+.... ++.+....++ ..+|+.-+
T Consensus 229 ~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 229 AEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp HTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred cCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 37999999986422 3444555553 23555544
No 252
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.30 E-value=0.025 Score=44.69 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=67.5
Q ss_pred CCC-CCCCeEEEEcC----CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCC
Q psy14499 53 NLN-IINSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDS 127 (262)
Q Consensus 53 g~~-l~~~~v~IqGf----G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~ 127 (262)
|.. ++.++|+|+|. |++|..+++.|.+.|++|.. .| |.+ + .+. +.+.+++.
T Consensus 8 ~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~-vn-------p~~---~----------~i~---G~~~~~s~ 63 (138)
T 1y81_A 8 GSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLP-VN-------PNY---D----------EIE---GLKCYRSV 63 (138)
T ss_dssp ------CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE-EC-------TTC---S----------EET---TEECBSSG
T ss_pred cccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEE-eC-------CCC---C----------eEC---CeeecCCH
Confidence 443 47889999999 99999999999999998542 22 321 0 011 22333324
Q ss_pred ccccccCceEEeeCCccCcccccchh---ccCce-EEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHH
Q psy14499 128 KEFWSIPCDILIPAAIEDQITINNAN---NVTAK-IILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVS 197 (262)
Q Consensus 128 ~~il~~~~DIlipaa~~~~it~e~a~---~~~~k-iIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s 197 (262)
+++. .++|+.+-|.+.. ...+.+. ....+ +++... ..+.+..+..+++|+.++ --|+-|++..
T Consensus 64 ~el~-~~vDlvii~vp~~-~v~~v~~~~~~~g~~~i~~~~~--~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 130 (138)
T 1y81_A 64 RELP-KDVDVIVFVVPPK-VGLQVAKEAVEAGFKKLWFQPG--AESEEIRRFLEKAGVEYS---FGRCIMVETS 130 (138)
T ss_dssp GGSC-TTCCEEEECSCHH-HHHHHHHHHHHTTCCEEEECTT--SCCHHHHHHHHHHTCEEE---CSCCHHHHC-
T ss_pred HHhC-CCCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEEcCc--cHHHHHHHHHHHCCCEEE---cCCcceEEcc
Confidence 4444 3689888887642 2222222 23344 444332 247888888999999985 2466676643
No 253
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.28 E-value=0.0017 Score=59.18 Aligned_cols=95 Identities=18% Similarity=0.280 Sum_probs=56.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcC-Ccc-CCCCc--------eecC-C
Q psy14499 59 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIK-DFNEG--------EKIN-D 126 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g-~~~-~~~~~--------~~~~-~ 126 (262)
.||+|.|+|.+|+.+++.|.+ .++.+++|.|. ++....+...+.+ ++- .+++. -.+. +
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~----------~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT----------RPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGT 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES----------SCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC----------ChhHHHHhcCCcchhhccccccceeeecCCceEEcCC
Confidence 489999999999999999987 57999999983 3222222222211 100 01100 0011 1
Q ss_pred CccccccCceEEeeCCccCcccccchhcc---CceEEEecCC
Q psy14499 127 SKEFWSIPCDILIPAAIEDQITINNANNV---TAKIILEGAN 165 (262)
Q Consensus 127 ~~~il~~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN 165 (262)
.++++ .++|+++.|++.. .+.+.+... .+++|.+++-
T Consensus 72 ~~~~~-~~vDvV~~atp~~-~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 72 VDDML-DEADIVIDCTPEG-IGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHHH-HTCSEEEECCSTT-HHHHHHHHHHHHTCCEEECTTS
T ss_pred HHHHh-cCCCEEEECCCch-hhHHHHHHHHHcCCEEEEecCC
Confidence 22333 3899999998754 334444443 5778887765
No 254
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.27 E-value=0.0042 Score=55.66 Aligned_cols=48 Identities=27% Similarity=0.415 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCC-----CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 43 IIGSKIASKINL-----NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 43 ~~~~~~~~~~g~-----~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
|+=+-+++.+|. .|+..+|+|+|.|.+|..+++.|.+.|..-+.+.|.
T Consensus 16 y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 16 PRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp ----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred chHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 444556666653 478999999999999999999999999766668884
No 255
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.25 E-value=0.0083 Score=54.76 Aligned_cols=107 Identities=12% Similarity=0.039 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc---c
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS---I 133 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~---~ 133 (262)
.-++|.|+|+|++|..+++.|.+.|.+|+ +.| .+.+.+....+. | ....++..+++. .
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~-~~d----------r~~~~~~~a~~~-G-------~~~~~~~~e~~~~a~~ 67 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVF-GYN----------RSRSGAKSAVDE-G-------FDVSADLEATLQRAAA 67 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHHHT-T-------CCEESCHHHHHHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHc-C-------CeeeCCHHHHHHhccc
Confidence 45689999999999999999999999887 667 466666554432 2 111222334442 2
Q ss_pred CceEEeeCCccCcccccchhcc----CceEEEecCCCCCCHHHHHHHHHC--CCeEec
Q psy14499 134 PCDILIPAAIEDQITINNANNV----TAKIILEGANGPTTTEADDILRDK--GIILAP 185 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~~----~~kiIve~AN~p~t~ea~~~l~~r--gi~~iP 185 (262)
+||+++.|.+...+ .+....+ ...+|++.+.. .++..+.+.+. ++.++|
T Consensus 68 ~aDlVilavP~~~~-~~vl~~l~~~~~~~iv~Dv~Sv--k~~i~~~~~~~~~~~~~v~ 122 (341)
T 3ktd_A 68 EDALIVLAVPMTAI-DSLLDAVHTHAPNNGFTDVVSV--KTAVYDAVKARNMQHRYVG 122 (341)
T ss_dssp TTCEEEECSCHHHH-HHHHHHHHHHCTTCCEEECCSC--SHHHHHHHHHTTCGGGEEC
T ss_pred CCCEEEEeCCHHHH-HHHHHHHHccCCCCEEEEcCCC--ChHHHHHHHHhCCCCcEec
Confidence 68999999886432 2322222 23466665432 23322333332 456776
No 256
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.22 E-value=0.0046 Score=55.77 Aligned_cols=81 Identities=12% Similarity=0.092 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHH--CCCEEEEEeCCCceeeCCCCCCHHH-HHHHHHhcCCccCCCCceecCCCccccc-
Q psy14499 57 INSKISIQGFGNVGSVAANLFFK--AGAKIVAIQDDKTTIYNPNGFNIPK-LQKYVTFTRSIKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~--~g~~vv~V~D~~G~i~~~~GlD~~~-l~~~~~~~g~~~~~~~~~~~~~~~~il~- 132 (262)
+..||+|+|+|++|+.+++.|.+ .+.++++++| .|+++ ..+..++.+.. ...++.+++++
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d----------~~~~~~~~~~a~~~g~~------~~~~~~e~ll~~ 66 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVG----------IDAASDGLARAQRMGVT------TTYAGVEGLIKL 66 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEEC----------SCTTCHHHHHHHHTTCC------EESSHHHHHHHS
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEe----------CChhhhHHHHHHHcCCC------cccCCHHHHHhc
Confidence 35799999999999999999965 5789999999 45444 33444433310 01111344543
Q ss_pred ---cCceEEeeCCccCcccccchhc
Q psy14499 133 ---IPCDILIPAAIEDQITINNANN 154 (262)
Q Consensus 133 ---~~~DIlipaa~~~~it~e~a~~ 154 (262)
.++|+++.|++ ...+.+.+..
T Consensus 67 ~~~~~iDvV~~atp-~~~h~~~a~~ 90 (312)
T 1nvm_B 67 PEFADIDFVFDATS-ASAHVQNEAL 90 (312)
T ss_dssp GGGGGEEEEEECSC-HHHHHHHHHH
T ss_pred cCCCCCcEEEECCC-hHHHHHHHHH
Confidence 37899999998 4455555444
No 257
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.19 E-value=0.14 Score=48.17 Aligned_cols=182 Identities=16% Similarity=0.124 Sum_probs=96.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC-------------cee
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE-------------GEK 123 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~-------------~~~ 123 (262)
...|++|+|.|.||..+|..|.+.|.+|+ +.| .|.+++.++.+. ..-...|+ .+.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~-~~D----------~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ 74 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVV-CVD----------KDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSF 74 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEE
Confidence 35799999999999999999999999998 667 444444444331 11000111 111
Q ss_pred cCCCccccccCceEEeeCCccCcc--c------------ccchhcc-CceEEEecCCCCC--CHHHHHHHHHCC------
Q psy14499 124 INDSKEFWSIPCDILIPAAIEDQI--T------------INNANNV-TAKIILEGANGPT--TTEADDILRDKG------ 180 (262)
Q Consensus 124 ~~~~~~il~~~~DIlipaa~~~~i--t------------~e~a~~~-~~kiIve~AN~p~--t~ea~~~l~~rg------ 180 (262)
-++..+.+ .+||++|-|-++..- + .+.++.+ +.++|+.-+-.|. +.+..+.+++++
T Consensus 75 ttd~~ea~-~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~ 153 (446)
T 4a7p_A 75 TTDLAEGV-KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAK 153 (446)
T ss_dssp ESCHHHHH-TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCE
T ss_pred ECCHHHHH-hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCce
Confidence 12122333 489999998332211 1 1122223 3445555554443 345556666653
Q ss_pred CeEeccccccc--------------hhhHHHHHHHHhhhcCCCC----------CHH--HHH----HHHHHHHHHHHHHH
Q psy14499 181 IILAPDVITNA--------------GGVIVSYFEWVQNLSNLLW----------TEQ--EIN----LRLNNIICNAFDAI 230 (262)
Q Consensus 181 i~~iPD~~aN~--------------GGvi~s~~E~~~~~~~~~~----------~~~--~v~----~~l~~~~~~~~~~v 230 (262)
+..-|.++... |+---..++.++.+-.-.. +.. ++. ..+.......++++
T Consensus 154 v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 233 (446)
T 4a7p_A 154 VVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEI 233 (446)
T ss_dssp EEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456654322 2111233444443221111 111 111 11222334557788
Q ss_pred HHHHhhcCCCHHHHHHHHHHH
Q psy14499 231 WELANTKKVSLRTAAFIIGCT 251 (262)
Q Consensus 231 ~~~a~~~~~~~r~aa~~~a~~ 251 (262)
...+++.|+++.+....++.+
T Consensus 234 ~~l~~~~GiD~~~v~~~~~~~ 254 (446)
T 4a7p_A 234 ADLCEQVGADVQEVSRGIGMD 254 (446)
T ss_dssp HHHHHHTTCCHHHHHHHHHTS
T ss_pred HHHHHHcCCCHHHHHHHHhcC
Confidence 889999999998887766543
No 258
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.15 E-value=0.016 Score=51.54 Aligned_cols=109 Identities=18% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+..||+|+|+ |++|+..++.|.+.|.++++..|.+.. | ++ +. +...+++.+++.+ .+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g----------~~---~~---G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----G----------TT---HL---GLPVFNTVREAVAATG 64 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----T----------CE---ET---TEEEESSHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----c----------ce---eC---CeeccCCHHHHhhcCC
Confidence 5689999999 999999999999989998766664210 0 00 11 2223332344542 37
Q ss_pred ceEEeeCCccCcccccchh---ccCceEEEecCCCCC-CH--HHHHHHHHCCCeEe-ccc
Q psy14499 135 CDILIPAAIEDQITINNAN---NVTAKIILEGANGPT-TT--EADDILRDKGIILA-PDV 187 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~---~~~~kiIve~AN~p~-t~--ea~~~l~~rgi~~i-PD~ 187 (262)
+|+.+-|++.... .+.+. +...+.++..+-+.. .. +..+..+++|+.++ |..
T Consensus 65 ~D~viI~tP~~~~-~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 65 ATASVIYVPAPFC-KDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp CCEEEECCCGGGH-HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred CCEEEEecCHHHH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 8999998876432 33332 235676565443322 22 34556677888666 443
No 259
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.14 E-value=0.02 Score=48.02 Aligned_cols=36 Identities=31% Similarity=0.408 Sum_probs=27.7
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 53 NLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 53 g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+.++..++|.|+|.|++|+.+++.|.+.|.+|+ +.|
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~ 49 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYG 49 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEc
Confidence 446788999999999999999999999999987 555
No 260
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.12 E-value=0.046 Score=49.64 Aligned_cols=93 Identities=23% Similarity=0.327 Sum_probs=55.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCCC---------Cce---
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDFN---------EGE--- 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~~---------~~~--- 122 (262)
.||+|.|||.+|+.++|+|.++ ...|++|.|. .|...+.-+.+ -++.+.+.. +++
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~---------~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~ 72 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL---------LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIR 72 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC---------CChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEE
Confidence 4899999999999999999875 6899999883 35554332222 223322110 000
Q ss_pred ecC--CCccc-c-ccCceEEeeCCccCcccccchhcc---CceEEE
Q psy14499 123 KIN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAKIIL 161 (262)
Q Consensus 123 ~~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~kiIv 161 (262)
... +++++ | ..++|++++|++ ...+.+.++.+ .+|.|.
T Consensus 73 v~~~~dp~~i~w~~~~vDvVf~atg-~~~s~e~a~~~l~~GakvVd 117 (330)
T 1gad_O 73 VTAERDPANLKWDEVGVDVVAEATG-LFLTDETARKHITAGAKKVV 117 (330)
T ss_dssp EECCSSGGGGCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEE
T ss_pred EEEcCChhhCccccccCCEEEECCC-ccccHHHHHHHHHCCCEEEE
Confidence 111 12333 2 257999999985 44556666555 566444
No 261
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.11 E-value=0.0049 Score=52.99 Aligned_cols=105 Identities=20% Similarity=0.303 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCC----CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAG----AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g----~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++|.|+|+|++|+.+++.|.+.| ..|+ +.|++- + + . +....++..+..
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~-~~~~~~-----~-----~-------~-------g~~~~~~~~~~~- 56 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLF-YYGPSK-----K-----N-------T-------TLNYMSSNEELA- 56 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEE-EECSSC-----C-----S-------S-------SSEECSCHHHHH-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEE-EEeCCc-----c-----c-------C-------ceEEeCCHHHHH-
Confidence 3568999999999999999999988 5665 666421 1 0 0 122222123333
Q ss_pred cCceEEeeCCccCcccccchhc----cCceEEEecCCCCCCHHHHHHHHH--CCCeEecccc
Q psy14499 133 IPCDILIPAAIEDQITINNANN----VTAKIILEGANGPTTTEADDILRD--KGIILAPDVI 188 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~----~~~kiIve~AN~p~t~ea~~~l~~--rgi~~iPD~~ 188 (262)
.++|++|.|.....+ .+.... ++.++|+--.|+--.....+.+.+ +.+.++|..-
T Consensus 57 ~~~D~vi~~v~~~~~-~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p 117 (262)
T 2rcy_A 57 RHCDIIVCAVKPDIA-GSVLNNIKPYLSSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTP 117 (262)
T ss_dssp HHCSEEEECSCTTTH-HHHHHHSGGGCTTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGG
T ss_pred hcCCEEEEEeCHHHH-HHHHHHHHHhcCCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChH
Confidence 379999999886533 333322 344566666665333334444433 2355667653
No 262
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.02 E-value=0.017 Score=49.62 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=54.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+.|+.|+ +.|.. -+.+.+.++.+. | .+ ++..+++ .++|++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~-~~~~~--------~~~~~~~~~~~~-g-------~~--~~~~~~~-~~aDvv 60 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVV-TSLEG--------RSPSTIERARTV-G-------VT--ETSEEDV-YSCPVV 60 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEE-ECCTT--------CCHHHHHHHHHH-T-------CE--ECCHHHH-HTSSEE
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEE-EeCCc--------cCHHHHHHHHHC-C-------Cc--CCHHHHH-hcCCEE
Confidence 479999999999999999999999877 44520 134444444332 2 11 2244444 489999
Q ss_pred eeCCccCccccc---chhccCceEEEecCCC
Q psy14499 139 IPAAIEDQITIN---NANNVTAKIILEGANG 166 (262)
Q Consensus 139 ipaa~~~~it~e---~a~~~~~kiIve~AN~ 166 (262)
+.|.+....... ..+.++. +|++-++.
T Consensus 61 i~~v~~~~~~~~~~~~~~~~~~-~vi~~s~~ 90 (264)
T 1i36_A 61 ISAVTPGVALGAARRAGRHVRG-IYVDINNI 90 (264)
T ss_dssp EECSCGGGHHHHHHHHHTTCCS-EEEECSCC
T ss_pred EEECCCHHHHHHHHHHHHhcCc-EEEEccCC
Confidence 999876543222 1222334 78877544
No 263
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.02 E-value=0.017 Score=53.65 Aligned_cols=116 Identities=19% Similarity=0.245 Sum_probs=69.7
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHC-C-CEEEEE-eCCCceeeCCCCCCHHHHHHHHHhcCC----ccC----------CC-
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKA-G-AKIVAI-QDDKTTIYNPNGFNIPKLQKYVTFTRS----IKD----------FN- 119 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~-g-~~vv~V-~D~~G~i~~~~GlD~~~l~~~~~~~g~----~~~----------~~- 119 (262)
++|+|.|+ |.||+.+++.+.+. + ++++++ ++ .+++.+.+..++.+- +.+ ++
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag----------~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN----------RNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES----------SCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC----------CCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc
Confidence 78999999 99999999999886 3 889988 56 566666665544321 000 00
Q ss_pred -CceecC---CCccccccCceEEeeCCccCcccccchh-cc-CceEEEecCCCCC----CHHHHHHHHHCCCeEecc
Q psy14499 120 -EGEKIN---DSKEFWSIPCDILIPAAIEDQITINNAN-NV-TAKIILEGANGPT----TTEADDILRDKGIILAPD 186 (262)
Q Consensus 120 -~~~~~~---~~~~il~~~~DIlipaa~~~~it~e~a~-~~-~~kiIve~AN~p~----t~ea~~~l~~rgi~~iPD 186 (262)
+.+.+. +..++.+.++|+++.|..+. .--+++. .+ ..|.|+=+ |-.+ -++..+..+++|+.++|-
T Consensus 75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G~-aGl~ptlaAi~aGK~VvlA-NKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 75 SSVEAAAGADALVEAAMMGADWTMAAIIGC-AGLKATLAAIRKGKTVALA-NKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp CSSEEEESHHHHHHHHTSCCSEEEECCCSG-GGHHHHHHHHHTTSEEEEC-CSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred CCcEEEeCccHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHHHCCCEEEEe-CcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 011111 01134444589999997552 2222222 23 34566554 4443 255556667889999886
No 264
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=95.95 E-value=0.077 Score=48.50 Aligned_cols=102 Identities=21% Similarity=0.347 Sum_probs=59.3
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---CC------
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---NE------ 120 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~~------ 120 (262)
..+...||+|-|||.+|+.+++.+.+. ...||+|.|.. .|++.+.-+.+ .+|.+.+- .+
T Consensus 7 ~~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~--------~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~ 78 (345)
T 2b4r_O 7 HHMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPF--------MDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIG 78 (345)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTT--------CCHHHHHHHHHCCTTTCSCSSCEEEETTEEEES
T ss_pred cchhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCC--------CChHHHHHHhccCCCCCcCCCCEEEcCCEEEEC
Confidence 346778999999999999999998764 58999998831 36654433333 22322110 00
Q ss_pred cee---cC--CCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 121 GEK---IN--DSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 121 ~~~---~~--~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
++. .. +++++ | +.++|++++|+. ...+.+.+... .|| +|+.+.
T Consensus 79 Gk~i~v~~~~dp~~~~w~~~gvDiV~estG-~f~s~e~a~~hl~aGakkVVIsap 132 (345)
T 2b4r_O 79 EKKVSVFAEKDPSQIPWGKCQVDVVCESTG-VFLTKELASSHLKGGAKKVIMSAP 132 (345)
T ss_dssp SCEEEEECCSSGGGCCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred CEEEEEEEcCCcccCcccccCCCEEEECcC-ccccHhhHHHHHHCCCCEEEECCC
Confidence 111 11 12222 2 248999999984 55566666554 565 666543
No 265
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.93 E-value=1 Score=42.21 Aligned_cols=43 Identities=26% Similarity=0.446 Sum_probs=36.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
.|.++.|+|.|.||..+|..|.+.|+.|+ +.| +|.+++.++.+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D----------~~~~kv~~L~~ 52 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVD----------INQQTIDKLQN 52 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHT
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHC
Confidence 57789999999999999999999999998 668 78888777665
No 266
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=95.90 E-value=0.0078 Score=52.66 Aligned_cols=68 Identities=9% Similarity=0.007 Sum_probs=40.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceEE
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDIL 138 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DIl 138 (262)
++|.|+|+|++|+.+++.|.+. ..|+.+.| .+.+++.+..++.+. ..++.++++ .++|++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~----------~~~~~~~~~~~~~g~--------~~~~~~~~~-~~~DvV 62 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILS----------RSIDRARNLAEVYGG--------KAATLEKHP-ELNGVV 62 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEEC----------SSHHHHHHHHHHTCC--------CCCSSCCCC-C---CE
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEe----------CCHHHHHHHHHHcCC--------ccCCHHHHH-hcCCEE
Confidence 4799999999999999999877 77655667 466666666554332 112133444 367888
Q ss_pred eeCCccCc
Q psy14499 139 IPAAIEDQ 146 (262)
Q Consensus 139 ipaa~~~~ 146 (262)
|.|.+.+.
T Consensus 63 ilav~~~~ 70 (276)
T 2i76_A 63 FVIVPDRY 70 (276)
T ss_dssp EECSCTTT
T ss_pred EEeCChHH
Confidence 88776654
No 267
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.90 E-value=0.0069 Score=54.90 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+++++|+|+|+|++|+.+++.|.+.|.+|+ +.|
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~ 46 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGL 46 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEE
Confidence 467899999999999999999999999876 666
No 268
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.87 E-value=0.06 Score=42.68 Aligned_cols=109 Identities=12% Similarity=0.109 Sum_probs=66.9
Q ss_pred CCeEEEEcC----CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 58 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 58 ~~~v~IqGf----G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++|+|+|. |++|..+++.|.+.|++|..| ||.+ ..+. +...+++.+++- .
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~-------------~~i~---G~~~y~sl~~l~-~ 76 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKY-------------EEVL---GRKCYPSVLDIP-D 76 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC-------------SEET---TEECBSSGGGCS-S
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCC-------------CeEC---CeeccCCHHHcC-C
Confidence 579999999 799999999999999985544 2221 0111 222233233443 3
Q ss_pred CceEEeeCCccCcccccchh---ccCceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHH
Q psy14499 134 PCDILIPAAIEDQITINNAN---NVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIV 196 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~---~~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~ 196 (262)
++|+.+-|.+... ..+.++ ....+.|+--. +....+..+..+++|+.++ --|+-|+..
T Consensus 77 ~vDlvvi~vp~~~-~~~vv~~~~~~gi~~i~~~~-g~~~~~l~~~a~~~Gi~vv---Gpnc~gv~~ 137 (144)
T 2d59_A 77 KIEVVDLFVKPKL-TMEYVEQAIKKGAKVVWFQY-NTYNREASKKADEAGLIIV---ANRCMMREH 137 (144)
T ss_dssp CCSEEEECSCHHH-HHHHHHHHHHHTCSEEEECT-TCCCHHHHHHHHHTTCEEE---ESCCHHHHH
T ss_pred CCCEEEEEeCHHH-HHHHHHHHHHcCCCEEEECC-CchHHHHHHHHHHcCCEEE---cCCchhhcc
Confidence 6888888766522 222222 23455444332 2347888899999999985 345566654
No 269
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.86 E-value=0.02 Score=50.74 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=63.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCC--CHHHHHHHHHhcCCcc-C--CCCceecC--CCcccc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGF--NIPKLQKYVTFTRSIK-D--FNEGEKIN--DSKEFW 131 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~Gl--D~~~l~~~~~~~g~~~-~--~~~~~~~~--~~~~il 131 (262)
++|+|+|.|++|+.++..|.+.|..|+ +.| . +.+.+..+.+....+. + ++.....+ +..+..
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~-~~~----------r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVR-IWG----------TEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL 69 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEE-EEC----------CGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEE----------ccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHH
Confidence 479999999999999999999999877 666 3 4555555444321111 0 00011111 122223
Q ss_pred ccCceEEeeCCccCcccc---cchhccC-ceEEEecCCCC------CCHHHHHHHHH
Q psy14499 132 SIPCDILIPAAIEDQITI---NNANNVT-AKIILEGANGP------TTTEADDILRD 178 (262)
Q Consensus 132 ~~~~DIlipaa~~~~it~---e~a~~~~-~kiIve~AN~p------~t~ea~~~l~~ 178 (262)
.++|+++-|.....+.. +..+ ++ .++|+.-.|+- ......+.+.+
T Consensus 70 -~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 70 -ENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp -TTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred -hcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 48999999987764321 2223 43 45888888875 23344555554
No 270
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.80 E-value=0.027 Score=50.91 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=28.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+.-.+|+|+|.|.+|++.|..+...|+.|+ +.|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~-l~D 36 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVK-LYD 36 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEE-EEC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEE-EEE
Confidence 345689999999999999999999999988 878
No 271
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.80 E-value=0.014 Score=52.51 Aligned_cols=103 Identities=18% Similarity=0.116 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCC-------CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC------cee
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAG-------AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------GEK 123 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g-------~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~------~~~ 123 (262)
..++|+|+|.|++|..++..|.+.| ..|+ +.|.+... .+- ..+..+.+........++ ...
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~-~~~r~~~~---~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVT-MWVFEEDI---GGK--KLTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEE-EECCCCBS---SSS--BHHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEE-EEEcChhh---hhh--HHHHHHHhcCcccccCCcccCccCeEE
Confidence 3468999999999999999999988 7766 66642210 000 022233322211111111 111
Q ss_pred cCCCccccccCceEEeeCCccCcccccchhc----c-CceEEEecCCCC
Q psy14499 124 INDSKEFWSIPCDILIPAAIEDQITINNANN----V-TAKIILEGANGP 167 (262)
Q Consensus 124 ~~~~~~il~~~~DIlipaa~~~~it~e~a~~----~-~~kiIve~AN~p 167 (262)
.++..+.. .+||++|.|.....+ .+.... + ..++|+...|+-
T Consensus 81 ~~~~~~~~-~~aD~Vilav~~~~~-~~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 81 VPDVVQAA-EDADILIFVVPHQFI-GKICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp ESSHHHHH-TTCSEEEECCCGGGH-HHHHHHHTTCSCTTCEEEECCCCB
T ss_pred EcCHHHHH-cCCCEEEEeCCHHHH-HHHHHHHHhhCCCCCEEEEECCcc
Confidence 12122333 489999999876433 233322 2 245888888864
No 272
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.78 E-value=0.05 Score=49.34 Aligned_cols=120 Identities=21% Similarity=0.176 Sum_probs=66.2
Q ss_pred HHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC--
Q psy14499 48 IASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN-- 125 (262)
Q Consensus 48 ~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~-- 125 (262)
+++..+....|.+|+|+|.|.||..+++++...|++|+++.. +.+++....++.|. ...++
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~-----------~~~~~~~~~~~lGa------~~v~~~~ 240 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST-----------SPSKKEEALKNFGA------DSFLVSR 240 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-----------CGGGHHHHHHTSCC------SEEEETT
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC-----------CHHHHHHHHHhcCC------ceEEecc
Confidence 344455544789999999999999999999999999885543 23333333323331 01111
Q ss_pred CCcccc--ccCceEEeeCCccCcccccchhcc--CceEEEecCC-CCCCHHHHHHHHHCCCeEec
Q psy14499 126 DSKEFW--SIPCDILIPAAIEDQITINNANNV--TAKIILEGAN-GPTTTEADDILRDKGIILAP 185 (262)
Q Consensus 126 ~~~~il--~~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN-~p~t~ea~~~l~~rgi~~iP 185 (262)
+.+.+. ...+|++++|+..........+.+ ..++|.=|.. .+.+-.. ..+..+++.+..
T Consensus 241 ~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~-~~~~~~~~~i~g 304 (366)
T 1yqd_A 241 DQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPA-FSLIAGRKIVAG 304 (366)
T ss_dssp CHHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECH-HHHHTTTCEEEE
T ss_pred CHHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCH-HHHHhCCcEEEE
Confidence 011121 137899999987543233333333 3555544432 2222111 224556666653
No 273
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.78 E-value=0.029 Score=53.33 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=35.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
..++|+|+|.|.||..+|..|.+.|.+|+ +.| .|.+++..+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~-~~d----------~~~~~v~~l~~ 49 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVF-CLD----------VDQAKIDILNN 49 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHC
Confidence 45799999999999999999999999988 567 56666666554
No 274
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.74 E-value=0.015 Score=52.68 Aligned_cols=99 Identities=11% Similarity=0.103 Sum_probs=59.7
Q ss_pred CCCCC-eEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC------ceecCCC
Q psy14499 55 NIINS-KISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------GEKINDS 127 (262)
Q Consensus 55 ~l~~~-~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~------~~~~~~~ 127 (262)
++..+ +|+|+|.|++|..++..|.+.|..|+ +.| .+.+.+..+.+........++ ....++.
T Consensus 11 ~~m~M~kI~iIG~G~mG~~la~~L~~~G~~V~-~~~----------r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (366)
T 1evy_A 11 ELLYLNKAVVFGSGAFGTALAMVLSKKCREVC-VWH----------MNEEEVRLVNEKRENVLFLKGVQLASNITFTSDV 79 (366)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTTEEEEE-EEC----------SCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCH
T ss_pred HhhccCeEEEECCCHHHHHHHHHHHhCCCEEE-EEE----------CCHHHHHHHHHcCcccccccccccccceeeeCCH
Confidence 34445 89999999999999999999998876 666 355665555544322211111 1212212
Q ss_pred ccccccCceEEeeCCccCcccccchhc--------cC--ceEEEecCCC
Q psy14499 128 KEFWSIPCDILIPAAIEDQITINNANN--------VT--AKIILEGANG 166 (262)
Q Consensus 128 ~~il~~~~DIlipaa~~~~it~e~a~~--------~~--~kiIve~AN~ 166 (262)
.+.. .++|++|.|.....+ .+.+.. ++ .++|+...|+
T Consensus 80 ~~~~-~~aDvVilav~~~~~-~~v~~~~~~gl~~~l~~~~~ivv~~~~g 126 (366)
T 1evy_A 80 EKAY-NGAEIILFVIPTQFL-RGFFEKSGGNLIAYAKEKQVPVLVCTKG 126 (366)
T ss_dssp HHHH-TTCSSEEECCCHHHH-HHHHHHHCHHHHHHHHHHTCCEEECCCS
T ss_pred HHHH-cCCCEEEECCChHHH-HHHHHHhHHHHHHhcCccCCEEEEECCc
Confidence 2333 379999998875332 222222 22 4577887776
No 275
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.70 E-value=0.0091 Score=49.61 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=57.1
Q ss_pred CeEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCceE
Q psy14499 59 SKISIQG-FGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCDI 137 (262)
Q Consensus 59 ~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~DI 137 (262)
++|+|+| .|++|+.+++.|.+.|.+|+ +.| -+.+++.+..+..+....-.+.. .++..+.+ .++|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~-~~~----------r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~D~ 67 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIV-VGS----------RREEKAEAKAAEYRRIAGDASIT-GMKNEDAA-EACDI 67 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEE-EEE----------SSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHH-HHCSE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHHhccccccCCCC-hhhHHHHH-hcCCE
Confidence 4799999 99999999999999999877 556 34555444433211000000111 11122333 47999
Q ss_pred EeeCCccCcccccchhc----cCceEEEecCCC
Q psy14499 138 LIPAAIEDQITINNANN----VTAKIILEGANG 166 (262)
Q Consensus 138 lipaa~~~~it~e~a~~----~~~kiIve~AN~ 166 (262)
++.|...+.+. +...+ ++.++|+..+|+
T Consensus 68 Vi~~~~~~~~~-~~~~~l~~~~~~~~vi~~~~g 99 (212)
T 1jay_A 68 AVLTIPWEHAI-DTARDLKNILREKIVVSPLVP 99 (212)
T ss_dssp EEECSCHHHHH-HHHHHTHHHHTTSEEEECCCC
T ss_pred EEEeCChhhHH-HHHHHHHHHcCCCEEEEcCCC
Confidence 99998865432 33322 245688998884
No 276
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.70 E-value=0.049 Score=49.58 Aligned_cols=129 Identities=12% Similarity=0.021 Sum_probs=76.3
Q ss_pred CCCCCeEEEEc-CCHHHHH-HH----HHHHHCC-CEEE---------EEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC
Q psy14499 55 NIINSKISIQG-FGNVGSV-AA----NLFFKAG-AKIV---------AIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF 118 (262)
Q Consensus 55 ~l~~~~v~IqG-fG~VG~~-~a----~~L~~~g-~~vv---------~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~ 118 (262)
+++..||+|+| +|.+|+. .+ +.+.+.+ ..++ +|+| .|+++..+..++.+.-
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~----------~~~~~a~~~a~~~~~~--- 69 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVG----------RSAEKVEALAKRFNIA--- 69 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEEC----------SSSHHHHHHHHHTTCC---
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEc----------CCHHHHHHHHHHhCCC---
Confidence 34667999999 9999997 55 6665543 2221 5888 5788877776665421
Q ss_pred CCceecCCCccccc-cCceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHH---HHHHCCCeEecccc
Q psy14499 119 NEGEKINDSKEFWS-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAPDVI 188 (262)
Q Consensus 119 ~~~~~~~~~~~il~-~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~---~l~~rgi~~iPD~~ 188 (262)
..+++.++++. .++|+++-|++. ..+.+.+... ...+++| -|+ + .++++ ..+++|+.+...+.
T Consensus 70 ---~~~~~~~~ll~~~~iD~V~i~tp~-~~h~~~~~~al~~Gk~V~~E---KP~a~~~~~~~~l~~~a~~~~~~~~v~~~ 142 (383)
T 3oqb_A 70 ---RWTTDLDAALADKNDTMFFDAATT-QARPGLLTQAINAGKHVYCE---KPIATNFEEALEVVKLANSKGVKHGTVQD 142 (383)
T ss_dssp ---CEESCHHHHHHCSSCCEEEECSCS-SSSHHHHHHHHTTTCEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred ---cccCCHHHHhcCCCCCEEEECCCc-hHHHHHHHHHHHCCCeEEEc---CCCCCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 22343567774 579999988875 4455554443 3345655 344 3 34443 33678887654443
Q ss_pred ccchhhHHHHHHHHh
Q psy14499 189 TNAGGVIVSYFEWVQ 203 (262)
Q Consensus 189 aN~GGvi~s~~E~~~ 203 (262)
.---..+....++++
T Consensus 143 ~r~~p~~~~~~~~i~ 157 (383)
T 3oqb_A 143 KLFLPGLKKIAFLRD 157 (383)
T ss_dssp GGGSHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHH
Confidence 333333444444443
No 277
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.69 E-value=0.023 Score=54.24 Aligned_cols=42 Identities=17% Similarity=0.360 Sum_probs=35.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
-++|+|+|.|.+|..+|..|.+.|+.|+ +.| .|.+++.+..+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~-l~D----------~~~e~l~~~~~ 46 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVL-LYD----------ISAEALTRAID 46 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEE-EEC----------SCHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEE-EEE----------CCHHHHHHHHH
Confidence 4589999999999999999999999987 777 67776665543
No 278
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.69 E-value=0.046 Score=47.96 Aligned_cols=49 Identities=24% Similarity=0.254 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQG-FGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++.|....++..+ +.++++++++|.| .|.+|+++++.|.+.|++|+ +++
T Consensus 101 d~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~-i~~ 150 (287)
T 1lu9_A 101 TAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVV-LCG 150 (287)
T ss_dssp HHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred hHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEE-EEE
Confidence 5667766665321 6778999999999 89999999999999999965 776
No 279
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=95.65 E-value=0.33 Score=44.05 Aligned_cols=97 Identities=21% Similarity=0.359 Sum_probs=60.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---C------Cceec-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---N------EGEKI- 124 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~------~~~~~- 124 (262)
.||.|-|||.+|+.+.|.+.+. ...||+|-|. -.|++.+.-+.+ .+|.+.+- . +++.+
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~ 73 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDP--------FITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIA 73 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 5899999999999999988775 6899999883 137776654444 23333210 0 11111
Q ss_pred ----CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 125 ----NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 125 ----~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 74 v~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkViIsap 122 (332)
T 3pym_A 74 TYQERDPANLPWGSSNVDIAIDSTG-VFKELDTAQKHIDAGAKKVVITAP 122 (332)
T ss_dssp EECCSSGGGSCTTTTTCSEEEECSS-SSCSHHHHHHHHHTTCSEEEESSC
T ss_pred EEeecccccCCccccCccEEEEecc-cccCHHHHHHHHHcCCCEEEECCC
Confidence 113332 3 468999999985 44566666554 454 666553
No 280
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.55 E-value=0.038 Score=52.51 Aligned_cols=40 Identities=23% Similarity=0.391 Sum_probs=32.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
++|+|+|.|.||..+|..|.+. |..|+ +.| .|.+++..+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D----------~~~~~v~~l~ 51 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVD----------MNTAKIAEWN 51 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EEC----------SCHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEE----------CCHHHHHHHH
Confidence 6899999999999999999987 78888 567 5666665554
No 281
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.54 E-value=0.11 Score=46.61 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCce
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPCD 136 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~D 136 (262)
.|.+|+|.|.|.||..+++++...|++|+++.. +.+++...+ +.|. ...+. ..+.+...+|
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~-----------~~~~~~~~~-~lGa------~~v~~-~~~~~~~~~D 236 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-----------NEHKKQDAL-SMGV------KHFYT-DPKQCKEELD 236 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECS-----------SSTTHHHHH-HTTC------SEEES-SGGGCCSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeC-----------CHHHHHHHH-hcCC------CeecC-CHHHHhcCCC
Confidence 688999999999999999999999999885532 222322222 2221 11122 2222333899
Q ss_pred EEeeCCccCcccccchhcc--CceEEEecCCC--CCC-HHHHHHHHHCCCeEec
Q psy14499 137 ILIPAAIEDQITINNANNV--TAKIILEGANG--PTT-TEADDILRDKGIILAP 185 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~--~~kiIve~AN~--p~t-~ea~~~l~~rgi~~iP 185 (262)
++++|......-....+.+ ..++|.=|... +.+ ......+..+++.+..
T Consensus 237 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 237 FIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp EEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred EEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence 9999987552223333333 45555544322 333 2223343366776653
No 282
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.51 E-value=0.038 Score=52.23 Aligned_cols=118 Identities=17% Similarity=0.155 Sum_probs=79.4
Q ss_pred HHHHHHHhCC-CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCcee
Q psy14499 45 GSKIASKINL-NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK 123 (262)
Q Consensus 45 ~~~~~~~~g~-~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~ 123 (262)
++..++.+|. +-.-++|.|.|.|++|..+|+.|. .+..+. +.+ -|.++...+.++. |+..+
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~-~~~~v~-iIE----------~d~~r~~~la~~l------~~~~V 282 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLE-QTYSVK-LIE----------RNLQRAEKLSEEL------ENTIV 282 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHT-TTSEEE-EEE----------SCHHHHHHHHHHC------TTSEE
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHhh-hcCceE-EEe----------cCHHHHHHHHHHC------CCceE
Confidence 4566666665 345679999999999999999985 457766 666 5777777766542 22222
Q ss_pred cC-C--Cccccc----cCceEEeeCCcc---CcccccchhccCceEEEecCCCCCCHHHHHHHHHCCCeE
Q psy14499 124 IN-D--SKEFWS----IPCDILIPAAIE---DQITINNANNVTAKIILEGANGPTTTEADDILRDKGIIL 183 (262)
Q Consensus 124 ~~-~--~~~il~----~~~DIlipaa~~---~~it~e~a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~ 183 (262)
+- | ..++|. .++|+|+-++.. |++..-.|+++.++-++.-.|.| +-.+.+++-||-.
T Consensus 283 i~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~---~~~~l~~~~gid~ 349 (461)
T 4g65_A 283 FCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRG---AYVDLVQGGVIDV 349 (461)
T ss_dssp EESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCH---HHHHHHCSSSSCE
T ss_pred EeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccccccc---chhhhhhccccce
Confidence 21 0 122332 489999999975 55667778889888777777765 3345555666544
No 283
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.48 E-value=0.011 Score=50.11 Aligned_cols=103 Identities=14% Similarity=0.060 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-CCceecCCCcccc----
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFW---- 131 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-~~~~~~~~~~~il---- 131 (262)
...+|+|.|+|.+|+.+++.|.+.|. |+ +.| -|++.+.+.. .+ +.-+ -+. + ..+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~-vid----------~~~~~~~~~~--~~-~~~i~gd~---~-~~~~l~~a~ 68 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FV-LAE----------DENVRKKVLR--SG-ANFVHGDP---T-RVSDLEKAN 68 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EE-EES----------CGGGHHHHHH--TT-CEEEESCT---T-CHHHHHHTT
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EE-EEE----------CCHHHHHHHh--cC-CeEEEcCC---C-CHHHHHhcC
Confidence 34689999999999999999999998 76 667 3555554443 12 1100 011 1 11222
Q ss_pred ccCceEEeeCCccCccc---ccchhccC--ceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 132 SIPCDILIPAAIEDQIT---INNANNVT--AKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 132 ~~~~DIlipaa~~~~it---~e~a~~~~--~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
-.++|.+|-|+..+..| ...++++. .++|+...| ++-.+.|++.|+.
T Consensus 69 i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~----~~~~~~l~~~G~~ 120 (234)
T 2aef_A 69 VRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 120 (234)
T ss_dssp CTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSS----GGGHHHHHHHTCS
T ss_pred cchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECC----HhHHHHHHHCCCC
Confidence 13799999988765333 34555553 466766543 3344667777875
No 284
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.44 E-value=0.047 Score=45.75 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=29.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++|+|.|. |.+|+++++.|.+.|++|+++..
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 578999999997 99999999999999999985543
No 285
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.43 E-value=0.0034 Score=54.56 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 91 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~ 91 (262)
+++++|+|+|.|.+|..+++.|.+.|..-+.+.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 456899999999999999999999998545588854
No 286
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.42 E-value=0.06 Score=47.99 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=59.6
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCce------ecCCC
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGE------KINDS 127 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~------~~~~~ 127 (262)
.+...++|+|+|.|++|..++..|.+.|..|+.+ - +.+.+....+..-.+. .++.. ..++.
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~-----------~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~ 81 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-A-----------RPQHVQAIEATGLRLE-TQSFDEQVKVSASSDP 81 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C-----------CHHHHHHHHHHCEEEE-CSSCEEEECCEEESCG
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-E-----------cHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCH
Confidence 3557889999999999999999999999988755 2 3444444444321221 12211 11212
Q ss_pred ccccccCceEEeeCCccCcccccchhcc-----CceEEEecCCCCCC
Q psy14499 128 KEFWSIPCDILIPAAIEDQITINNANNV-----TAKIILEGANGPTT 169 (262)
Q Consensus 128 ~~il~~~~DIlipaa~~~~it~e~a~~~-----~~kiIve~AN~p~t 169 (262)
++ . .++|++|-|.....+ .+.+..+ .-.+|+...|+--.
T Consensus 82 ~~-~-~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 82 SA-V-QGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp GG-G-TTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred HH-c-CCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 22 2 489999999877643 3333333 23478888887654
No 287
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.41 E-value=0.077 Score=42.15 Aligned_cols=110 Identities=12% Similarity=0.164 Sum_probs=67.5
Q ss_pred CCeEEEEcC----CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 58 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 58 ~~~v~IqGf----G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
.++|+|+|. |++|..+++.|.+.|++|. ..| |.-. ...+. +.+.+++.+++- .
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~-~vn-------p~~~-----------g~~i~---G~~~~~sl~el~-~ 69 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVI-PVS-------PKVA-----------GKTLL---GQQGYATLADVP-E 69 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEE-EEC-------SSST-----------TSEET---TEECCSSTTTCS-S
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEE-EeC-------Cccc-----------ccccC---CeeccCCHHHcC-C
Confidence 578999999 8999999999999999854 323 2210 00111 223333244444 4
Q ss_pred CceEEeeCCccCcccccchhc---cCce-EEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHH
Q psy14499 134 PCDILIPAAIEDQITINNANN---VTAK-IILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIV 196 (262)
Q Consensus 134 ~~DIlipaa~~~~it~e~a~~---~~~k-iIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~ 196 (262)
++|+.+-|.+.. ...+.+.. ...+ +++.. +..+.+..+.++++|+.++ --|+-|++.
T Consensus 70 ~~Dlvii~vp~~-~v~~v~~~~~~~g~~~i~i~~--~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~ 130 (145)
T 2duw_A 70 KVDMVDVFRNSE-AAWGVAQEAIAIGAKTLWLQL--GVINEQAAVLAREAGLSVV---MDRCPAIEL 130 (145)
T ss_dssp CCSEEECCSCST-HHHHHHHHHHHHTCCEEECCT--TCCCHHHHHHHHTTTCEEE---CSCCHHHHS
T ss_pred CCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEEcC--ChHHHHHHHHHHHcCCEEE---cCCeeeEEc
Confidence 789999887643 22333322 2333 55553 2347888889999999986 345566654
No 288
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.40 E-value=0.023 Score=51.03 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=74.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cCce
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IPCD 136 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~~D 136 (262)
..||+|+|+|.++...++.| ..++++++|+|.+ ++ -..+++.+..++.+ + +...+++.++++. .++|
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~-----~~-~~~~~~~~~~~~~~-~----~~~~~~~~~~ll~~~~vD 69 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGV-----PE-EDLSKLEKAISEMN-I----KPKKYNNWWEMLEKEKPD 69 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSS-----TT-CCCHHHHHHHHTTT-C----CCEECSSHHHHHHHHCCS
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCC-----ch-hhHHHHHHHHHHcC-C----CCcccCCHHHHhcCCCCC
Confidence 36999999999998877777 6789999999931 10 01234444333332 1 1233444567775 5799
Q ss_pred EEeeCCccCcccccchhcc---CceEEEecCCCCCCHHHHHH---HHHCCCe--EeccccccchhhHHHHHHHHh
Q psy14499 137 ILIPAAIEDQITINNANNV---TAKIILEGANGPTTTEADDI---LRDKGII--LAPDVITNAGGVIVSYFEWVQ 203 (262)
Q Consensus 137 Ilipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ea~~~---l~~rgi~--~iPD~~aN~GGvi~s~~E~~~ 203 (262)
+++-|++.. .+.+.+... ...+++|=.=.....|++++ .+++|+. +...+.----..+....++++
T Consensus 70 ~V~I~tp~~-~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~ 143 (337)
T 3ip3_A 70 ILVINTVFS-LNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVS 143 (337)
T ss_dssp EEEECSSHH-HHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred EEEEeCCcc-hHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHh
Confidence 999988643 344443332 44577774222222455443 3667776 444443333333333444443
No 289
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=95.37 E-value=0.28 Score=44.65 Aligned_cols=96 Identities=18% Similarity=0.235 Sum_probs=60.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC---CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---C------Cce-
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA---GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---N------EGE- 122 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~---g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~------~~~- 122 (262)
.||.|-|||.+|+.+.|.+.+. ...||+|-|. .|++.+.-+.+ .+|.+.+- . +++
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~ 73 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL---------GPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGP 73 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSE
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC---------CCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEE
Confidence 5899999999999999988775 5889999884 47776554444 22322210 0 111
Q ss_pred --ec--CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 --KI--NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 --~~--~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.. .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 74 I~v~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkViIsap 124 (335)
T 3doc_A 74 IKVHAVRNPAELPWKEENVDIALECTG-IFTSRDKAALHLEAGAKRVIVSAP 124 (335)
T ss_dssp EEEECCSSTTSSCTTTTTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEeecccccccccccCCCEEEEccC-ccCCHHHHHHHHHcCCCEEEECCC
Confidence 11 123332 3 468999999985 44566666554 454 666553
No 290
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=95.36 E-value=0.028 Score=50.62 Aligned_cols=148 Identities=14% Similarity=0.139 Sum_probs=83.6
Q ss_pred ecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCC
Q psy14499 21 TGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNG 99 (262)
Q Consensus 21 tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~G 99 (262)
||.|. ...+-...|++=...+---+.+++-.+ ..+++.|+|.|..|+..++.|.+ .+.+-|.|.|++
T Consensus 88 tG~p~---a~ld~~~lT~~RTaA~s~laa~~La~~-~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------- 155 (313)
T 3hdj_A 88 DGRPL---ATCDAGTLTRKRTAACTVLAAGALARP-RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-------- 155 (313)
T ss_dssp TCCEE---EEECSHHHHHHHHHHHHHHHHHHHSCT-TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--------
T ss_pred CCCEE---EEEcCchhhhHHHHHHHHHHHHhhccC-CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--------
Confidence 55554 223444556654444433455666443 67899999999999999999977 456555577743
Q ss_pred CCHHHHHHHHH-hcCCccCCCCceecCCCccccccCceEEeeCCccC--cccccchhccCceEEEecCCCCCCHHHHHHH
Q psy14499 100 FNIPKLQKYVT-FTRSIKDFNEGEKINDSKEFWSIPCDILIPAAIED--QITINNANNVTAKIILEGANGPTTTEADDIL 176 (262)
Q Consensus 100 lD~~~l~~~~~-~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~~~--~it~e~a~~~~~kiIve~AN~p~t~ea~~~l 176 (262)
..+++.+..+ +.+ + .....+ .++.+ .++||++-|++.. ++..+..+ -.+-++.=|+..|-..|.+..+
T Consensus 156 -~a~~la~~l~~~~g-~----~~~~~~-~~eav-~~aDIVi~aT~s~~pvl~~~~l~-~G~~V~~vGs~~p~~~El~~~~ 226 (313)
T 3hdj_A 156 -ASPEILERIGRRCG-V----PARMAA-PADIA-AQADIVVTATRSTTPLFAGQALR-AGAFVGAIGSSLPHTRELDDEA 226 (313)
T ss_dssp -CCHHHHHHHHHHHT-S----CEEECC-HHHHH-HHCSEEEECCCCSSCSSCGGGCC-TTCEEEECCCSSTTCCCCCHHH
T ss_pred -HHHHHHHHHHHhcC-C----eEEEeC-HHHHH-hhCCEEEEccCCCCcccCHHHcC-CCcEEEECCCCCCchhhcCHHH
Confidence 2334433222 222 1 112222 44554 4899999998753 33322111 1345666677777555555445
Q ss_pred HHCCCeEeccccc
Q psy14499 177 RDKGIILAPDVIT 189 (262)
Q Consensus 177 ~~rgi~~iPD~~a 189 (262)
..+.-.++.|...
T Consensus 227 ~~~a~~v~vD~~~ 239 (313)
T 3hdj_A 227 LRRARAVVVEWRE 239 (313)
T ss_dssp HHHCSEEEESCHH
T ss_pred HhcCCEEEECCHH
Confidence 5565445566543
No 291
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.32 E-value=0.21 Score=45.00 Aligned_cols=117 Identities=17% Similarity=0.177 Sum_probs=64.9
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC--C
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN--D 126 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~--~ 126 (262)
++..+....|.+|+|+|.|.||..+++++...|++|+++.. +.+++...+++.|. ...++ +
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~-----------~~~~~~~~~~~lGa------~~vi~~~~ 234 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS-----------SNKKREEALQDLGA------DDYVIGSD 234 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES-----------STTHHHHHHTTSCC------SCEEETTC
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC-----------ChHHHHHHHHHcCC------ceeecccc
Confidence 44444443688999999999999999999999999885543 23343333323331 01111 0
Q ss_pred Ccccc--ccCceEEeeCCccCcccccchhcc--CceEEEecC-CCCCC-HHHHHHHHHCCCeEe
Q psy14499 127 SKEFW--SIPCDILIPAAIEDQITINNANNV--TAKIILEGA-NGPTT-TEADDILRDKGIILA 184 (262)
Q Consensus 127 ~~~il--~~~~DIlipaa~~~~it~e~a~~~--~~kiIve~A-N~p~t-~ea~~~l~~rgi~~i 184 (262)
.+.+. ...+|++++|+.....-....+.+ ..++|.=|. +.+.+ .... +..+++.+.
T Consensus 235 ~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~--~~~~~~~i~ 296 (357)
T 2cf5_A 235 QAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL--LMLGRKVIT 296 (357)
T ss_dssp HHHHHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH--HHHHTCEEE
T ss_pred HHHHHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH--HHhCccEEE
Confidence 11121 136899999987542222223333 456555443 33332 2222 555666664
No 292
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.24 E-value=0.12 Score=39.99 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=65.1
Q ss_pred CCeEEEEcC----CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccccc
Q psy14499 58 NSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 58 ~~~v~IqGf----G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~ 133 (262)
-++|+|+|. ++.|..+.+.|.+.|++|.-| ||.+ ..+.+ .+.+++..++-+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--------nP~~-------------~~i~G---~~~y~sl~dlp~- 58 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPV--------GRKK-------------GEVLG---KTIINERPVIEG- 58 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--------SSSC-------------SEETT---EECBCSCCCCTT-
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--------CCCC-------------CcCCC---eeccCChHHCCC-
Confidence 468999997 679999999999999988755 2221 11111 112222333332
Q ss_pred CceEEeeCCccCcccc--cchhccCceEEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHH
Q psy14499 134 PCDILIPAAIEDQITI--NNANNVTAKIILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIV 196 (262)
Q Consensus 134 ~~DIlipaa~~~~it~--e~a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~ 196 (262)
.|+.+-+......-+ +.+.+..+|.|+= .-+...+|+.++.++.||.++| |+-|+..
T Consensus 59 -vDlavi~~p~~~v~~~v~e~~~~g~k~v~~-~~G~~~~e~~~~a~~~Girvv~----nC~gv~l 117 (122)
T 3ff4_A 59 -VDTVTLYINPQNQLSEYNYILSLKPKRVIF-NPGTENEELEEILSENGIEPVI----GCTLVML 117 (122)
T ss_dssp -CCEEEECSCHHHHGGGHHHHHHHCCSEEEE-CTTCCCHHHHHHHHHTTCEEEE----SCHHHHH
T ss_pred -CCEEEEEeCHHHHHHHHHHHHhcCCCEEEE-CCCCChHHHHHHHHHcCCeEEC----CcCeEEe
Confidence 676666654322211 2233334453432 2234578999999999999984 7777754
No 293
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.23 E-value=0.021 Score=52.00 Aligned_cols=100 Identities=15% Similarity=0.061 Sum_probs=55.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC-------CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCC------ceecC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAG-------AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNE------GEKIN 125 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g-------~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~------~~~~~ 125 (262)
++|+|+|.|++|..++..|.+.| ..|+ +.|.+.... +- ..+..+.+........|+ ....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~~~~~---~~--~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 95 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVR-MWIRDEFVN---GE--RMVDIINNKHENTKYLKGVPLPHNIVAHS 95 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEE-EECCSCC------C--CHHHHHHHHCBCTTTSTTCBCCTTEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEE-EEECChhhh---hH--HHHHHHHhcCcccccCCcccCcCCeEEEC
Confidence 58999999999999999999988 7776 666321110 00 033333332111111111 12222
Q ss_pred CCccccccCceEEeeCCccCcccccch----h----ccC-ceEEEecCCC
Q psy14499 126 DSKEFWSIPCDILIPAAIEDQITINNA----N----NVT-AKIILEGANG 166 (262)
Q Consensus 126 ~~~~il~~~~DIlipaa~~~~it~e~a----~----~~~-~kiIve~AN~ 166 (262)
+..+.. .++|++|.|.....+ .+.+ + .++ -++|+...|+
T Consensus 96 ~~~ea~-~~aDvVilav~~~~~-~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 96 DLASVI-NDADLLIFIVPCQYL-ESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp STHHHH-TTCSEEEECCCHHHH-HHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred CHHHHH-cCCCEEEEcCCHHHH-HHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 233333 489999999876433 2222 2 232 4578888876
No 294
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.19 E-value=0.03 Score=50.31 Aligned_cols=93 Identities=20% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCc------eecCCCcccc
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEG------EKINDSKEFW 131 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~------~~~~~~~~il 131 (262)
.++|+|+|.|++|..++..|.+.|..|+ +.|+ + +.+.+..+..-.+.. ++. ...++.++ +
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~-~~~r----------~-~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~ 68 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAIN-VLAR----------G-ATLQALQTAGLRLTE-DGATHTLPVRATHDAAA-L 68 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEE-EECC----------H-HHHHHHHHTCEEEEE-TTEEEEECCEEESCHHH-H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEE-EEEC----------h-HHHHHHHHCCCEEec-CCCeEEEeeeEECCHHH-c
Confidence 4789999999999999999999999877 5452 2 233333332111111 111 11121222 2
Q ss_pred ccCceEEeeCCccCcccccchhcc-----CceEEEecCCC
Q psy14499 132 SIPCDILIPAAIEDQITINNANNV-----TAKIILEGANG 166 (262)
Q Consensus 132 ~~~~DIlipaa~~~~it~e~a~~~-----~~kiIve~AN~ 166 (262)
.++|++|-|.....+ .+.++.+ ...+|+...|+
T Consensus 69 -~~~D~Vilavk~~~~-~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 69 -GEQDVVIVAVKAPAL-ESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp -CCCSEEEECCCHHHH-HHHHGGGSSSCCTTCEEEECCSS
T ss_pred -CCCCEEEEeCCchhH-HHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999876433 3444443 24588899998
No 295
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.18 E-value=0.037 Score=49.18 Aligned_cols=126 Identities=19% Similarity=0.192 Sum_probs=73.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
+.+||+|+|+ |+.|+.+++.+.+.|.++++..+.+.. | ..+. +...+++.+++.+ .+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-----g-------------~~i~---G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-----G-------------MEVL---GVPVYDTVKEAVAHHE 64 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----T-------------CEET---TEEEESSHHHHHHHSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-----C-------------ceEC---CEEeeCCHHHHhhcCC
Confidence 4689999999 999999999999999997755443210 0 0011 2223332334432 37
Q ss_pred ceEEeeCCccCcccccc---hhccCce-EEEecCCCCCC--HHHHHHHHHCCCeEe-cc---------------------
Q psy14499 135 CDILIPAAIEDQITINN---ANNVTAK-IILEGANGPTT--TEADDILRDKGIILA-PD--------------------- 186 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~---a~~~~~k-iIve~AN~p~t--~ea~~~l~~rgi~~i-PD--------------------- 186 (262)
+|+.+.+.+.... .+. +-+.+.+ +|+-....+.. .+..+..+++|+.++ |.
T Consensus 65 ~Dv~Ii~vp~~~~-~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~ 143 (288)
T 1oi7_A 65 VDASIIFVPAPAA-ADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGNCPGIISAEETKIGIMPGHVFK 143 (288)
T ss_dssp CSEEEECCCHHHH-HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESSSCEEEETTTEEEESSCGGGCC
T ss_pred CCEEEEecCHHHH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCeEEcCCCceeEEcccCCCC
Confidence 8999988765432 222 2233566 44433333322 245566677888666 32
Q ss_pred -----ccccchhhHHHHHHHHhh
Q psy14499 187 -----VITNAGGVIVSYFEWVQN 204 (262)
Q Consensus 187 -----~~aN~GGvi~s~~E~~~~ 204 (262)
+++-||++....+.|...
T Consensus 144 ~G~va~vsqSG~l~~~~~~~~~~ 166 (288)
T 1oi7_A 144 RGRVGIISRSGTLTYEAAAALSQ 166 (288)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHh
Confidence 334457777777777764
No 296
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=95.12 E-value=0.05 Score=46.41 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=37.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 49 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSD----------INAEGAKAAAAS 49 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC----------SCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999996 7899999999999999988 666 456666555544
No 297
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.08 E-value=0.073 Score=48.97 Aligned_cols=106 Identities=13% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA--GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIP 134 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~ 134 (262)
...||+|+|.| .|+.-++.+.+. +++++||+| .|.++..+..++.| ...+++.+++++ +
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~----------~~~~~a~~~a~~~g-------v~~~~~~~~l~~-~ 66 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLA----------QGSARSRELAHAFG-------IPLYTSPEQITG-M 66 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEEC----------CSSHHHHHHHHHTT-------CCEESSGGGCCS-C
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEEC----------CCHHHHHHHHHHhC-------CCEECCHHHHhc-C
Confidence 45799999999 698877777664 689999999 57777777777654 223443566764 7
Q ss_pred ceEEeeCCccCccc---ccchhcc---CceEEEecCCCCCC-HHHHHHH---HHCCCeEe
Q psy14499 135 CDILIPAAIEDQIT---INNANNV---TAKIILEGANGPTT-TEADDIL---RDKGIILA 184 (262)
Q Consensus 135 ~DIlipaa~~~~it---~e~a~~~---~~kiIve~AN~p~t-~ea~~~l---~~rgi~~i 184 (262)
+|+.+=|++...-. .+.+... ...+++|= |+| .|+++++ +++|+.+.
T Consensus 67 ~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EK---Pl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 67 PDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEH---PLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp CSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEES---CCCHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEEECCCcccchhHHHHHHHHHHcCCcEEEec---CCCHHHHHHHHHHHHHcCCEEE
Confidence 88888777654322 2333332 45588885 465 3444333 67887775
No 298
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.02 E-value=0.089 Score=49.92 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=28.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++|+|+|.|.+|..+|..|.+.|..|+ +.|
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~-l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETF-LVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEE-EEE
Confidence 689999999999999999999999988 778
No 299
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=94.99 E-value=0.25 Score=45.09 Aligned_cols=96 Identities=24% Similarity=0.420 Sum_probs=60.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---C------Ccee--
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---N------EGEK-- 123 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~------~~~~-- 123 (262)
.||.|-|||.+|+.+.|.+.+. ...+|+|-|. .|++.+.-+.+ .+|.+.+- . +++.
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~---------~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS---------YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIR 75 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC---------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 6899999999999999988775 5899999884 57776554444 22322210 0 1111
Q ss_pred c---CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 I---NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 ~---~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
+ .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkViISap 124 (345)
T 4dib_A 76 LLNNRDPKELPWTDLGVEVVIEATG-KFNSKEKAILHVEAGAKKVILTAP 124 (345)
T ss_dssp EECCSCGGGSCTTTTTEEEEEECSS-SCCBHHHHTHHHHTTCSEEEESSC
T ss_pred EeecCChhhCCccccCccEEEEecc-CcCCHHHHHHHHHCCCCEEEECCC
Confidence 1 123332 3 468999999985 44566666554 454 666654
No 300
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.99 E-value=0.037 Score=51.32 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=68.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC---EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCcee----cCCC---c
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEK----INDS---K 128 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~---~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~----~~~~---~ 128 (262)
++|+|+|.|.+|+.+++.|.+.|. .|+ ++| .+.+++.+..++.+...+ +.... +++. +
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~-v~~----------r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d~~~l~ 69 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHIT-LAS----------RTLSKCQEIAQSIKAKGY-GEIDITTVDADSIEELV 69 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEE-EEE----------SCHHHHHHHHHHHHHTTC-CCCEEEECCTTCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEE-EEE----------CCHHHHHHHHHHhhhhcC-CceEEEEecCCCHHHHH
Confidence 489999999999999999999883 554 777 466666655443211000 01111 1111 1
Q ss_pred cccc-cCceEEeeCCccCcccccchh---ccCceEEEecCCC-CC--C-------HHHHHHHHHCCCeEeccccccch
Q psy14499 129 EFWS-IPCDILIPAAIEDQITINNAN---NVTAKIILEGANG-PT--T-------TEADDILRDKGIILAPDVITNAG 192 (262)
Q Consensus 129 ~il~-~~~DIlipaa~~~~it~e~a~---~~~~kiIve~AN~-p~--t-------~ea~~~l~~rgi~~iPD~~aN~G 192 (262)
+++. .++|++|-|+.... +...+. +-+.. +++-++. +. + .+..+..+++|+.+++..=...|
T Consensus 70 ~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~-vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG 145 (405)
T 4ina_A 70 ALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVP-YLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPG 145 (405)
T ss_dssp HHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCC-EEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTB
T ss_pred HHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCC-EEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCcc
Confidence 2332 35899999987542 222222 12344 4444443 11 1 14556678899998877655444
No 301
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.95 E-value=0.019 Score=50.47 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=58.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC-----C-CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcC-CccCCCCc------eecC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA-----G-AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIKDFNEG------EKIN 125 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~-----g-~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g-~~~~~~~~------~~~~ 125 (262)
++|.|+|.|++|..++..|.+. | ..|+ +.|+ .+.+.++.++.| .+...++. ...+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r-----------~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVS-WIAR-----------GAHLEAIRAAGGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEE-EECC-----------HHHHHHHHHHTSEEEECSSCEEEECCSEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEE-EEEc-----------HHHHHHHHhcCCeEEEeCCCCeEEecceEec
Confidence 5899999999999999999988 8 8877 5552 334444443122 12111111 1112
Q ss_pred CCccccccCceEEeeCCccCcccccchhcc----C-ceEEEecCCCCCC
Q psy14499 126 DSKEFWSIPCDILIPAAIEDQITINNANNV----T-AKIILEGANGPTT 169 (262)
Q Consensus 126 ~~~~il~~~~DIlipaa~~~~it~e~a~~~----~-~kiIve~AN~p~t 169 (262)
..+.. .++|++|-|.....+ .+.+..+ + .++|+.-.|+.-+
T Consensus 77 -~~~~~-~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 77 -NPAEV-GTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp -CHHHH-CCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred -Ccccc-CCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 22222 489999999876654 3333333 2 4578888888644
No 302
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=94.92 E-value=0.5 Score=43.00 Aligned_cols=97 Identities=20% Similarity=0.365 Sum_probs=60.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccCC---C------Ccee-
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKDF---N------EGEK- 123 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~~---~------~~~~- 123 (262)
..||.|-|||.+|+.+.|.+.+. ...||+|-|. .|++.+.-+.+ .+|.+.+- . +++.
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I 74 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL---------TDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEV 74 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEE
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEecC---------CCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEE
Confidence 46899999999999999988775 5899999883 57776544443 23433210 0 1111
Q ss_pred -c---CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 124 -I---NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 124 -~---~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
+ .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 75 ~v~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkViISap 124 (338)
T 3lvf_P 75 KSFSEPDASKLPWKDLNIDVVLECTG-FYTDKDKAQAHIEAGAKKVLISAP 124 (338)
T ss_dssp EEECCSCGGGSCTTTTTCSEEEECSS-SCCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEecccccCCccccCCCEEEEccC-CcCCHHHHHHHHHcCCCEEEECCC
Confidence 1 123332 2 468999999984 44566665554 454 666654
No 303
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.90 E-value=0.011 Score=50.63 Aligned_cols=52 Identities=19% Similarity=0.191 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCHHHHHHHHHH--HHCCCEEEEEeC
Q psy14499 37 TGRGVFIIGSKIASKINLNIINSKISIQGFGNVGSVAANLF--FKAGAKIVAIQD 89 (262)
Q Consensus 37 Tg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L--~~~g~~vv~V~D 89 (262)
-||-|-.-++..-+.+|.+ +..+|+|.|.|+.|+.+++.+ .+.|++++|+.|
T Consensus 64 ~GY~V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D 117 (212)
T 3keo_A 64 FGYDVKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFD 117 (212)
T ss_dssp SSEEHHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEE
T ss_pred CCEEHHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEe
Confidence 3666655555555567776 567999999999999999974 456899999998
No 304
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.89 E-value=0.27 Score=44.57 Aligned_cols=123 Identities=14% Similarity=0.125 Sum_probs=64.8
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceecC
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKIN 125 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~~ 125 (262)
++..+.. .|.+|+|+|.|.||..+++++...|+ +|+ ++| .+.+++.. .++.|. +-++......+
T Consensus 175 l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi-~~~----------~~~~~~~~-a~~lGa~~vi~~~~~~~~~ 241 (370)
T 4ej6_A 175 VDLSGIK-AGSTVAILGGGVIGLLTVQLARLAGATTVI-LST----------RQATKRRL-AEEVGATATVDPSAGDVVE 241 (370)
T ss_dssp HHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCSEEE-EEC----------SCHHHHHH-HHHHTCSEEECTTSSCHHH
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEE-EEC----------CCHHHHHH-HHHcCCCEEECCCCcCHHH
Confidence 3444444 67899999999999999999999999 676 555 34455433 333331 11111110000
Q ss_pred CCcc---ccccCceEEeeCCccCcccccchhcc--CceEEEecCCC---CCCHHHHHHHHHCCCeEec
Q psy14499 126 DSKE---FWSIPCDILIPAAIEDQITINNANNV--TAKIILEGANG---PTTTEADDILRDKGIILAP 185 (262)
Q Consensus 126 ~~~~---il~~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~---p~t~ea~~~l~~rgi~~iP 185 (262)
...+ +..-.+|++++|+.....-.+....+ ..++|.=|... +.+... ..+..+++.+.-
T Consensus 242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~-~~~~~~~~~i~g 308 (370)
T 4ej6_A 242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEP-FDILFRELRVLG 308 (370)
T ss_dssp HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCH-HHHHHTTCEEEE
T ss_pred HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCH-HHHHhCCcEEEE
Confidence 0001 11126999999986432212222222 46666554332 222222 234566776654
No 305
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.83 E-value=0.14 Score=48.33 Aligned_cols=31 Identities=26% Similarity=0.458 Sum_probs=28.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
-++|+|+|.|.+|..+|..|.+.|+.|+ +.|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~-l~D 67 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVV-AVE 67 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEE-EEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEE-EEE
Confidence 3589999999999999999999999987 767
No 306
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.82 E-value=0.13 Score=46.13 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEE
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAI 87 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V 87 (262)
.+.+|+|+|.|.||..+++++...|+ +|+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~ 198 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVS 198 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 88999999999999999999999999 88844
No 307
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.78 E-value=0.089 Score=49.29 Aligned_cols=35 Identities=31% Similarity=0.507 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
++++++|.|+|.|..|.++|++|.+.|++|. ++|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~-~~D~ 40 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVT-VNDG 40 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEE-EEES
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEeC
Confidence 5789999999999999999999999999988 8885
No 308
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.75 E-value=0.046 Score=46.86 Aligned_cols=46 Identities=20% Similarity=0.358 Sum_probs=37.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 51 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVA-IAD----------IDIERARQAAAE 51 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999996 8899999999999999988 556 356666555544
No 309
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=94.69 E-value=0.21 Score=43.95 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH----CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFK----AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW 131 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~----~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il 131 (262)
.+..||+|+|+|.+|+..++.|.+ .+.++++|+|.+- + .++. +.. ..+.++++
T Consensus 5 ~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--------a~~~-------g~~-~~~~~ell 61 (294)
T 1lc0_A 5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--------GSLD-------EVR-QISLEDAL 61 (294)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--------CEET-------TEE-BCCHHHHH
T ss_pred CCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--------HHHc-------CCC-CCCHHHHh
Confidence 355799999999999998888764 5789999998531 0 0111 111 12245666
Q ss_pred c-cCceEEeeCCccCcccccchhcc---CceEEEecCCCCC--C-HHHHH---HHHHCCCeEeccccccchhhHHHHHHH
Q psy14499 132 S-IPCDILIPAAIEDQITINNANNV---TAKIILEGANGPT--T-TEADD---ILRDKGIILAPDVITNAGGVIVSYFEW 201 (262)
Q Consensus 132 ~-~~~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~--t-~ea~~---~l~~rgi~~iPD~~aN~GGvi~s~~E~ 201 (262)
. .++|+++-|++. ..+.+.+... ...+++|= |+ + .|+++ ..+++|+.+.-.+..--...+....++
T Consensus 62 ~~~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~ 137 (294)
T 1lc0_A 62 RSQEIDVAYICSES-SSHEDYIRQFLQAGKHVLVEY---PMTLSFAAAQELWELAAQKGRVLHEEHVELLMEEFEFLRRE 137 (294)
T ss_dssp HCSSEEEEEECSCG-GGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHH
T ss_pred cCCCCCEEEEeCCc-HhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccHHHHHHHHH
Confidence 3 578999999874 3455554443 34477773 54 3 33433 335678776544433333333333343
Q ss_pred H
Q psy14499 202 V 202 (262)
Q Consensus 202 ~ 202 (262)
+
T Consensus 138 i 138 (294)
T 1lc0_A 138 V 138 (294)
T ss_dssp H
T ss_pred H
Confidence 3
No 310
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=94.66 E-value=0.41 Score=43.56 Aligned_cols=98 Identities=17% Similarity=0.319 Sum_probs=60.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccC-C---C-C------ce
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKD-F---N-E------GE 122 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~-~---~-~------~~ 122 (262)
..||.|-|||.+|+.+.|.+.+. ...||+|-|. ..|++.+.-+.+ .+|.+.+ - . + ++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk 74 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDP--------FITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEK 74 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT--------TSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTE
T ss_pred ceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCE
Confidence 46899999999999999988775 5889999882 137776554443 2343332 0 0 0 11
Q ss_pred ec-----CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 123 KI-----NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 123 ~~-----~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.+ .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 75 ~I~v~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~a~~hl~aGAkkViIsap 126 (337)
T 3v1y_O 75 PVTVFGIRNPDEIPWAEAGAEYVVESTG-VFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEEECCSSGGGCCHHHHTCCEEEECSS-SCCSHHHHTHHHHTTCCEEEESSC
T ss_pred EEEEEEecCcccCCccccCCcEEEEecc-ccCCHHHHHHHHHcCCCEEEECCC
Confidence 11 112222 2 358999999985 44566665554 465 666543
No 311
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.60 E-value=0.13 Score=45.79 Aligned_cols=77 Identities=21% Similarity=0.205 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceecCCCcccccc
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKINDSKEFWSI 133 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~~~~~~il~~ 133 (262)
.+.+|+|+|. |.+|..+++++...|++|+++.. +.+++....++.|. +.++.+....+...++...
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG-----------GAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-----------SHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-----------CHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCC
Confidence 6889999998 99999999999999999985543 45555554343332 1111110000000011123
Q ss_pred CceEEeeCCcc
Q psy14499 134 PCDILIPAAIE 144 (262)
Q Consensus 134 ~~DIlipaa~~ 144 (262)
.+|++++|+..
T Consensus 218 ~~d~vi~~~g~ 228 (336)
T 4b7c_A 218 GIDVFFDNVGG 228 (336)
T ss_dssp CEEEEEESSCH
T ss_pred CceEEEECCCc
Confidence 69999999875
No 312
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.58 E-value=0.038 Score=44.64 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=28.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
..|+|+|.|..|..+|..|.+.|.+|+ |.|.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~-v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVH-LFDK 33 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEE-EECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEE-EEEC
Confidence 569999999999999999999999988 8885
No 313
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.57 E-value=0.14 Score=46.38 Aligned_cols=76 Identities=20% Similarity=0.090 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-CCceecCCCccccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWS 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-~~~~~~~~~~~il~ 132 (262)
-.+++|+|+|.|+||+.++..|...|. .++ +.| ++.+++.-..........| +..+..++..+.+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~-l~D----------~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~- 74 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIG-IVD----------IFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDA- 74 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEe----------CChHHHHHHHhhHhhhhhhcCCcEEEECcHHHh-
Confidence 356899999999999999999988776 555 778 5666554322111001111 2222222223333
Q ss_pred cCceEEeeCCc
Q psy14499 133 IPCDILIPAAI 143 (262)
Q Consensus 133 ~~~DIlipaa~ 143 (262)
.+|||+|-++.
T Consensus 75 ~~aDiVvi~ag 85 (326)
T 3vku_A 75 KDADLVVITAG 85 (326)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 59999988765
No 314
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.57 E-value=0.3 Score=38.45 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=66.3
Q ss_pred CCCeEEEEcC----CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 57 INSKISIQGF----GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqGf----G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
+.++|+|+|. |+.|..+++.|.+.|++|..| |+.+. ...+. +...+++.+++-
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v-------------np~~~------~~~i~---G~~~~~sl~el~- 68 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV-------------NPRFQ------GEELF---GEEAVASLLDLK- 68 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE-------------CGGGT------TSEET---TEECBSSGGGCC-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe-------------CCCcc------cCcCC---CEEecCCHHHCC-
Confidence 3579999999 899999999999999985433 22210 01111 222232233333
Q ss_pred cCceEEeeCCccCcccccc---hhccCce-EEEecCCCCCCHHHHHHHHHCCCeEeccccccchhhHHHH
Q psy14499 133 IPCDILIPAAIEDQITINN---ANNVTAK-IILEGANGPTTTEADDILRDKGIILAPDVITNAGGVIVSY 198 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~---a~~~~~k-iIve~AN~p~t~ea~~~l~~rgi~~iPD~~aN~GGvi~s~ 198 (262)
.++|+.+-|.+.... .+. +-....| +++.. +....++.+..+++|+.++ --|+-|++...
T Consensus 69 ~~vDlavi~vp~~~~-~~v~~~~~~~gi~~i~~~~--g~~~~~~~~~a~~~Gir~v---gpnc~g~~~~~ 132 (140)
T 1iuk_A 69 EPVDILDVFRPPSAL-MDHLPEVLALRPGLVWLQS--GIRHPEFEKALKEAGIPVV---ADRCLMVEHKR 132 (140)
T ss_dssp SCCSEEEECSCHHHH-TTTHHHHHHHCCSCEEECT--TCCCHHHHHHHHHTTCCEE---ESCCHHHHHHH
T ss_pred CCCCEEEEEeCHHHH-HHHHHHHHHcCCCEEEEcC--CcCHHHHHHHHHHcCCEEE---cCCccceEChh
Confidence 367877776654211 111 2222333 33322 1237888899999999884 44777877644
No 315
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.55 E-value=0.09 Score=44.13 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~-~~~ 38 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVV-AVS 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 3678999999997 8999999999999999988 444
No 316
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.51 E-value=0.022 Score=48.48 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=47.6
Q ss_pred HHhCCCCCCCeEEEEcCCHHHHHHHHHH--HHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCC
Q psy14499 50 SKINLNIINSKISIQGFGNVGSVAANLF--FKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDS 127 (262)
Q Consensus 50 ~~~g~~l~~~~v~IqGfG~VG~~~a~~L--~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~ 127 (262)
+.+|.+ +..+|+|+|+|++|+.+++.+ .. |++++|++| .|+++.- ..+.++| ....++.
T Consensus 73 ~~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D----------~dp~k~g------~~i~gv~-V~~~~dl 133 (211)
T 2dt5_A 73 HILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFD----------VDPEKVG------RPVRGGV-IEHVDLL 133 (211)
T ss_dssp HHHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEE----------SCTTTTT------CEETTEE-EEEGGGH
T ss_pred HHhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEe----------CCHHHHh------hhhcCCe-eecHHhH
Confidence 344654 457999999999999999863 33 899999998 3443211 1111111 1112223
Q ss_pred ccccccCceEEeeCCccC
Q psy14499 128 KEFWSIPCDILIPAAIED 145 (262)
Q Consensus 128 ~~il~~~~DIlipaa~~~ 145 (262)
++++..++|+++-|.+..
T Consensus 134 ~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 134 PQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp HHHSTTTCCEEEECSCHH
T ss_pred HHHHHcCCCEEEEeCCch
Confidence 344422899999998754
No 317
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.49 E-value=0.038 Score=48.94 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++|+|+|.|.||...++.|.+.|++|+ |.|
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~Vt-Via 43 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLT-LVS 43 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEE-EEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEE-EEc
Confidence 47899999999999999999999999999988 544
No 318
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=94.46 E-value=0.17 Score=47.05 Aligned_cols=77 Identities=25% Similarity=0.348 Sum_probs=55.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCC---EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGA---KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~---~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~ 132 (262)
...+|+|+|. |+||+++++.+...|+ .|. +.| ... ... | .. + +++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~-v~D------------~~~----~~~-g-------~~-~---~~i-- 261 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANIL-KWD------------IKE----TSR-G-------GP-F---DEI-- 261 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEE-EEC------------HHH----HTT-C-------SC-C---THH--
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceE-Eee------------ccc----ccc-C-------Cc-h---hhH--
Confidence 4678999999 9999999999999998 554 766 221 011 1 10 1 223
Q ss_pred cCceEEeeCCc-----cCcccccchhcc-C-ceEEEecC
Q psy14499 133 IPCDILIPAAI-----EDQITINNANNV-T-AKIILEGA 164 (262)
Q Consensus 133 ~~~DIlipaa~-----~~~it~e~a~~~-~-~kiIve~A 164 (262)
.++||+|-|.+ +.++|.+.+.++ + -.+||+-|
T Consensus 262 ~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 262 PQADIFINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHSSEEEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred hhCCEEEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 38999999987 688999999988 3 55777654
No 319
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.44 E-value=0.31 Score=44.69 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=29.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
-.|.+|+|+|.|.||..+++++...|+ +|++ +|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~-~~ 245 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVIL-SE 245 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEE-EC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE-EC
Confidence 368899999999999999999999999 7774 44
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.39 E-value=0.63 Score=41.68 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=31.0
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEE
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAI 87 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V 87 (262)
++..+.. .|.+|+|+|.|.||..+++++...|+ +|+++
T Consensus 164 l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 202 (356)
T 1pl8_A 164 CRRGGVT-LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVT 202 (356)
T ss_dssp HHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 3444443 67899999999999999999999999 88744
No 321
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=94.34 E-value=0.1 Score=43.73 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~-~~~ 38 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVV-AVT 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 4678999999997 8999999999999999988 444
No 322
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.32 E-value=0.12 Score=51.52 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++|+|+|.|.+|..+|..|.+.|+.|+ +.|
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~-l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVI-LKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEE-EEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEE-EEE
Confidence 579999999999999999999999987 777
No 323
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.30 E-value=0.088 Score=46.47 Aligned_cols=33 Identities=33% Similarity=0.457 Sum_probs=28.5
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
..++|.|+| +|++|..+++.|.+.|..|+ +.|.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~-~~~~ 53 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPIS-ILDR 53 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEE-EECT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEE-EEEC
Confidence 446899999 99999999999999999877 6563
No 324
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.26 E-value=0.055 Score=49.27 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=27.8
Q ss_pred CeEEEEc-CCHHHHHHHHHHHHCC-CEEEEEeCC
Q psy14499 59 SKISIQG-FGNVGSVAANLFFKAG-AKIVAIQDD 90 (262)
Q Consensus 59 ~~v~IqG-fG~VG~~~a~~L~~~g-~~vv~V~D~ 90 (262)
+||+|.| +|.+|+.+++.|.+.. ..++++++.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 6899999 8999999999998764 688888873
No 325
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.24 E-value=0.076 Score=48.46 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+++.+|+|+|.|.+|..+++.|...|..-+.+.|.
T Consensus 116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 46889999999999999999999999876768884
No 326
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=94.15 E-value=0.1 Score=47.71 Aligned_cols=93 Identities=14% Similarity=0.142 Sum_probs=54.7
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCC-CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC--CCceecCCCccccc
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAG-AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF--NEGEKINDSKEFWS 132 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g-~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~--~~~~~~~~~~~il~ 132 (262)
+..||+|.| +|.+|+.+++.|.+.. ..++++.|.. +.|...+... +.+.+. .+-. +.+ ++.+.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-----~~g~~~~~~~------~~~~~~v~~dl~-~~~-~~~~~ 81 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-----KAGQSMESVF------PHLRAQKLPTLV-SVK-DADFS 81 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-----TTTSCHHHHC------GGGTTSCCCCCB-CGG-GCCGG
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-----hcCCCHHHhC------chhcCcccccce-ecc-hhHhc
Confidence 457999999 9999999999998864 6899888742 3344443321 111110 0101 111 33443
Q ss_pred cCceEEeeCCccCcccccchhcc--CceEEEecC
Q psy14499 133 IPCDILIPAAIEDQITINNANNV--TAKIILEGA 164 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~--~~kiIve~A 164 (262)
++|+++.|++.. .+.+.+... .+++|--++
T Consensus 82 -~vDvVf~atp~~-~s~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 82 -TVDAVFCCLPHG-TTQEIIKELPTALKIVDLSA 113 (359)
T ss_dssp -GCSEEEECCCTT-THHHHHHTSCTTCEEEECSS
T ss_pred -CCCEEEEcCCch-hHHHHHHHHhCCCEEEECCc
Confidence 899999998643 344444443 345444444
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.14 E-value=0.22 Score=45.14 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=31.7
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
++..+.. .|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 187 l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 187 LRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp HHHTTCC-TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4444433 67899999999999999999999999987554
No 328
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=94.12 E-value=0.059 Score=46.22 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=36.7
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 51 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVL-LTG----------RNESNIARIREE 51 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999996 7899999999999999988 555 355666555543
No 329
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=94.08 E-value=0.11 Score=44.91 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 40 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVV-ICD 40 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 4678999999996 8899999999999999988 555
No 330
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.07 E-value=0.054 Score=48.42 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=62.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc---cC
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS---IP 134 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~---~~ 134 (262)
..+++|.|+|.+|+.+++.|.+.|. ++ +.| .|++.+. ..+. +...-+-+++ + ++.+.. .+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~-vid----------~~~~~~~-~~~~-~~~~i~gd~~--~-~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FV-LAE----------DENVRKK-VLRS-GANFVHGDPT--R-VSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EE-EES----------CGGGHHH-HHHT-TCEEEESCTT--S-HHHHHHTCSTT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EE-EEe----------CChhhhh-HHhC-CcEEEEeCCC--C-HHHHHhcChhh
Confidence 4589999999999999999999998 76 667 4666655 4332 1100000110 1 111211 47
Q ss_pred ceEEeeCCccCcc---cccchhccC--ceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 135 CDILIPAAIEDQI---TINNANNVT--AKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 135 ~DIlipaa~~~~i---t~e~a~~~~--~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
+|.++-++..+.. ....++++. .++|+...| ++..+.|++.|+.
T Consensus 178 a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~----~~~~~~l~~~G~d 226 (336)
T 1lnq_A 178 ARAVIVDLESDSETIHCILGIRKIDESVRIIAEAER----YENIEQLRMAGAD 226 (336)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTCTTSEEEEECSS----GGGHHHHHHTTCS
T ss_pred ccEEEEcCCccHHHHHHHHHHHHHCCCCeEEEEECC----HHHHHHHHHcCCC
Confidence 8999988765432 234455553 467776533 4445677888875
No 331
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=94.06 E-value=0.14 Score=45.70 Aligned_cols=107 Identities=19% Similarity=0.234 Sum_probs=61.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
...+++|+|+ |+.|+.+++.|.+.|.++++-.+.+.. |- .+. +...+++.+++.+ .+
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~-----g~-------------~i~---G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKG-----GS-------------EVH---GVPVYDSVKEALAEHP 70 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC-------------EET---TEEEESSHHHHHHHCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCC-----Cc-------------eEC---CEeeeCCHHHHhhcCC
Confidence 4567888898 999999999999999996655443200 00 011 2233332344543 24
Q ss_pred -ceEEeeCCccCccc--ccchhccCce-EEEecCCCCCC--HHHHHHHHHCCCeEe
Q psy14499 135 -CDILIPAAIEDQIT--INNANNVTAK-IILEGANGPTT--TEADDILRDKGIILA 184 (262)
Q Consensus 135 -~DIlipaa~~~~it--~e~a~~~~~k-iIve~AN~p~t--~ea~~~l~~rgi~~i 184 (262)
+|+.+.+.+....- -+.+-+.+.+ +|+-....+.. .+..+..+++|+.++
T Consensus 71 ~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 71 EINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp TCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 89999888764332 1223334677 44433332221 244566678898666
No 332
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.04 E-value=0.08 Score=46.05 Aligned_cols=48 Identities=23% Similarity=0.341 Sum_probs=38.1
Q ss_pred CCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 53 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 53 g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
..++++++++|.|. |.+|+++++.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 70 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVV-VAD----------VNEDAAVRVANE 70 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SSHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 35688999999996 7899999999999999988 556 355666555544
No 333
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=94.01 E-value=0.08 Score=46.05 Aligned_cols=46 Identities=17% Similarity=0.304 Sum_probs=36.8
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 48 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVA-VLD----------KSAERLRELEVA 48 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999996 7899999999999999998 555 356666655544
No 334
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.00 E-value=0.23 Score=43.34 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.7
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+++++|+|.|. |-+|+++++.|.+.|++|+++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467899999997 99999999999999999985543
No 335
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.95 E-value=0.14 Score=45.19 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=40.1
Q ss_pred HHHhCCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhc
Q psy14499 49 ASKINLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFT 112 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~ 112 (262)
++.|...|+|+.++|.|. +.+|+++|+.|.+.|++|+ ++| .+.+++.+..++.
T Consensus 20 ~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~-i~~----------r~~~~l~~~~~~~ 73 (273)
T 4fgs_A 20 FQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVF-ITG----------RRKDVLDAAIAEI 73 (273)
T ss_dssp -----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHHH
T ss_pred hhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHHc
Confidence 344555799999999997 5699999999999999988 777 5677777766554
No 336
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=93.93 E-value=0.076 Score=45.37 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 36 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVV-LAD 36 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 478899999996 8999999999999999988 555
No 337
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.93 E-value=0.15 Score=46.01 Aligned_cols=75 Identities=23% Similarity=0.115 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHH--hcCCccCC-CCceecCCCcccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDF-NEGEKINDSKEFW 131 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~--~~g~~~~~-~~~~~~~~~~~il 131 (262)
..++|+|+|.|.||+.++..|...|. .++ +.| +|.+++..... +.+ ..-+ ++.+..++..+.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~-l~D----------~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~ 71 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELV-VID----------VNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDC 71 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEE-EEe----------cchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHh
Confidence 35799999999999999999988886 555 777 66665543211 111 1111 1222222122333
Q ss_pred ccCceEEeeCCcc
Q psy14499 132 SIPCDILIPAAIE 144 (262)
Q Consensus 132 ~~~~DIlipaa~~ 144 (262)
.++||+|-++..
T Consensus 72 -~~aDvVvi~ag~ 83 (326)
T 3pqe_A 72 -KDADIVCICAGA 83 (326)
T ss_dssp -TTCSEEEECCSC
T ss_pred -CCCCEEEEeccc
Confidence 589999988754
No 338
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=92.98 E-value=0.01 Score=49.84 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
+++++|.|+|+|++|+.+++.|.+.|.+|+ +.|++-. .+.+ .+. +....+ ..+.+ .++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~-~~~r~~~--------~~~~---~~~--------g~~~~~-~~~~~-~~a 74 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVV-FGSRNPQ--------VSSL---LPR--------GAEVLC-YSEAA-SRS 74 (201)
Confidence 678899999999999999999999998876 5553211 1111 111 111112 33444 378
Q ss_pred eEEeeCCccCcccccch---hccCceEEEecCCCC
Q psy14499 136 DILIPAAIEDQITINNA---NNVTAKIILEGANGP 167 (262)
Q Consensus 136 DIlipaa~~~~it~e~a---~~~~~kiIve~AN~p 167 (262)
|+++-|.....+ .+.. .....++|+..+|+-
T Consensus 75 DvVilav~~~~~-~~v~~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 75 DVIVLAVHREHY-DFLAELADSLKGRVLIDVSNNQ 108 (201)
Confidence 999888765432 2221 112345888888875
No 339
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=93.89 E-value=0.08 Score=46.11 Aligned_cols=46 Identities=17% Similarity=0.262 Sum_probs=36.8
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.| .+.+++.+..++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~-~~~----------r~~~~~~~~~~~ 59 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVI-MAV----------RDTRKGEAAART 59 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHH
Confidence 688999999996 8899999999999999988 555 356666555443
No 340
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=93.88 E-value=0.074 Score=45.99 Aligned_cols=46 Identities=22% Similarity=0.331 Sum_probs=36.8
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++|+.|.+.|++|+ +.| .+.+++.+..++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 70 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVG-LHG----------TREDKLKEIAAD 70 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999996 7899999999999999988 555 355666555544
No 341
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.81 E-value=0.22 Score=45.42 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
.|.+|+|+|.|.||..++++++..|+ +|+ ++|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi-~~~ 217 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVI-VGD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEE-EEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEE-EEc
Confidence 67899999999999999999999999 566 445
No 342
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.81 E-value=0.077 Score=52.93 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.-++|+|+|.|.+|..+|..|.+.|+.|+ +.|
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~-l~D 344 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPIL-MKD 344 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEE-EEC
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEE-EEE
Confidence 34679999999999999999999999987 777
No 343
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.81 E-value=0.54 Score=41.96 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.4
Q ss_pred CCCeEEEE-cCCHHHHHHHHHHHHCCCEEEEE
Q psy14499 57 INSKISIQ-GFGNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 57 ~~~~v~Iq-GfG~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.+|+|+ |.|.||..+++++...|++|+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~ 181 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITT 181 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEE
Confidence 68999999 79999999999999999999854
No 344
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.79 E-value=0.15 Score=46.66 Aligned_cols=32 Identities=31% Similarity=0.268 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEe
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~ 88 (262)
.|.+|+|+|.|.||..++++++..|+ +|+++.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 217 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGD 217 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 68899999999999999999999999 888543
No 345
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=93.79 E-value=0.09 Score=44.70 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=30.3
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIA-IAD 38 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEc
Confidence 3578999999985 8899999999999999988 445
No 346
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.34 Score=43.31 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=31.4
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++..+.. .+.+|+|.|.|.||..+++++...|++|+ ++|
T Consensus 161 l~~~~~~-~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi-~~~ 199 (352)
T 1e3j_A 161 CRRAGVQ-LGTTVLVIGAGPIGLVSVLAAKAYGAFVV-CTA 199 (352)
T ss_dssp HHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCEEE-EEc
Confidence 3433443 67899999999999999999999999976 444
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.74 E-value=0.24 Score=44.23 Aligned_cols=39 Identities=26% Similarity=0.331 Sum_probs=31.6
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++..+.. .+.+|+|+|.|.+|..+++++...|++|++ +|
T Consensus 157 l~~~~~~-~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~-~~ 195 (339)
T 1rjw_A 157 LKVTGAK-PGEWVAIYGIGGLGHVAVQYAKAMGLNVVA-VD 195 (339)
T ss_dssp HHHHTCC-TTCEEEEECCSTTHHHHHHHHHHTTCEEEE-EC
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCEEEE-Ee
Confidence 3444433 578999999999999999999999999884 44
No 348
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.73 E-value=0.16 Score=45.17 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.+.+|+|.|.|.||..++++++..|++|+++.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 197 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 68899999999999999999999999998553
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.73 E-value=0.31 Score=43.25 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=29.5
Q ss_pred CCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 56 IINSKISIQG-FGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 56 l~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
-.+.+|+|.| .|.+|..+++++...|++|+++.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 180 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVA 180 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3788999999 79999999999999999998554
No 350
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.71 E-value=0.23 Score=44.80 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.|.+|+|+|.|.||..+++++...|++|+++.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~ 220 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68899999999999999999999999998553
No 351
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.70 E-value=0.44 Score=42.22 Aligned_cols=109 Identities=16% Similarity=0.165 Sum_probs=62.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC--CCCc-----eecCCCcccc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD--FNEG-----EKINDSKEFW 131 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~--~~~~-----~~~~~~~~il 131 (262)
++|+|+|.|++|..++..|.+.|..|+ +.+++ +.+++ .+..-.+.+ +++. ...++.+++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~-~~~r~---------~~~~i---~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVS-VVSRS---------DYETV---KAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEE-EECST---------THHHH---HHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEE-EEeCC---------hHHHH---HhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 689999999999999999999999887 44421 12222 221111221 1111 1122123332
Q ss_pred ccCceEEeeCCccCcccccchhcc----C-ceEEEecCCCCCC-HHHHHHHHHCCCe
Q psy14499 132 SIPCDILIPAAIEDQITINNANNV----T-AKIILEGANGPTT-TEADDILRDKGII 182 (262)
Q Consensus 132 ~~~~DIlipaa~~~~it~e~a~~~----~-~kiIve~AN~p~t-~ea~~~l~~rgi~ 182 (262)
.++|++|-|.....+. +.++.+ + ..+|+-..|+--. ....+.|-+..|.
T Consensus 70 -~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 70 -TKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp -SCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEE
T ss_pred -CCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEE
Confidence 3899999998766543 333333 2 3578888888654 3344555444343
No 352
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.67 E-value=0.1 Score=44.93 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEcCC---HHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 54 LNIINSKISIQGFG---NVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 54 ~~l~~~~v~IqGfG---~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
.+|+|++++|.|.+ -+|+++|+.|.+.|++|+ ++|.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vv-i~~r 40 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLV-FTYR 40 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEE-EEES
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEE-EEEC
Confidence 37899999999974 599999999999999988 7763
No 353
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.61 E-value=0.14 Score=46.30 Aligned_cols=113 Identities=18% Similarity=0.129 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceecCCCccccc-
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKINDSKEFWS- 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~~~~~~il~- 132 (262)
.+.+|+|+|.|.||..++++++..|+ +|+++ | .+.+++...+ +.|. +-++.... + .+.+.+
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~-~----------~~~~~~~~a~-~lGa~~vi~~~~~~-~--~~~~~~~ 254 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAV-D----------IVESRLELAK-QLGATHVINSKTQD-P--VAAIKEI 254 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEE-E----------SCHHHHHHHH-HHTCSEEEETTTSC-H--HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE-C----------CCHHHHHHHH-HcCCCEEecCCccC-H--HHHHHHh
Confidence 67899999999999999999999999 57744 4 2445543333 3331 11111100 0 011221
Q ss_pred --cCceEEeeCCccCcccccchhcc--CceEEEecCCC---CCCHHHHHHHHHCCCeEec
Q psy14499 133 --IPCDILIPAAIEDQITINNANNV--TAKIILEGANG---PTTTEADDILRDKGIILAP 185 (262)
Q Consensus 133 --~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~---p~t~ea~~~l~~rgi~~iP 185 (262)
-.+|++++|+.......+..+.+ ..++|.=|... +.+-.... +..+++.+..
T Consensus 255 ~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~-~~~~~~~i~g 313 (371)
T 1f8f_A 255 TDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVND-LLLGGKTILG 313 (371)
T ss_dssp TTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHH-HHHTTCEEEE
T ss_pred cCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHH-HHhCCCEEEE
Confidence 26999999986432222333333 45665544322 22211222 4456776653
No 354
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.59 E-value=0.13 Score=44.79 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=36.9
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHH
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYV 109 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~ 109 (262)
+|+|++++|.|. +.+|+++|+.|.+.|++|+ ++| .+.+++.+..
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-i~~----------~~~~~~~~~~ 50 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVI-LND----------IRATLLAESV 50 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECC----------SCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHH
Confidence 789999999996 6699999999999999988 888 5666655543
No 355
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.57 E-value=0.13 Score=44.69 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=37.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
+|+|+.++|.|. +.+|+++|+.|.+.|++|+ ++| .+.+++.+..+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~----------~~~~~~~~~~~ 49 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVE----------LLEDRLNQIVQ 49 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEE----------CCHHHHHHHHH
Confidence 689999999997 5699999999999999988 777 56666655544
No 356
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.55 E-value=0.04 Score=47.03 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=25.4
Q ss_pred hCCCCCCCeEEEEcCCHHHHHHHHH--HHHCCCEEEEEeC
Q psy14499 52 INLNIINSKISIQGFGNVGSVAANL--FFKAGAKIVAIQD 89 (262)
Q Consensus 52 ~g~~l~~~~v~IqGfG~VG~~~a~~--L~~~g~~vv~V~D 89 (262)
+|.+ +..+|+|+|.|++|+.+++. +...|++++++.|
T Consensus 80 lg~~-~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D 118 (215)
T 2vt3_A 80 LDQD-EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFD 118 (215)
T ss_dssp HHHC----CEEEECCSHHHHHHHHCC------CCEEEEEE
T ss_pred hCcC-CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEe
Confidence 3443 45789999999999999994 4456899999998
No 357
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.50 E-value=0.077 Score=46.21 Aligned_cols=46 Identities=13% Similarity=0.199 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 72 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVL-CAD----------IDGDAADAAATK 72 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEE-EEE----------SSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 578999999986 7899999999999999988 556 355555555443
No 358
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.50 E-value=1.8 Score=38.02 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=62.9
Q ss_pred HHHhCCCCCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecC-C
Q psy14499 49 ASKINLNIINSKISIQG-FGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKIN-D 126 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~-~ 126 (262)
++..+.. .|.+|+|+| .|.||..++++++..|++|++++. .++ +++.++.|. ...++ .
T Consensus 145 l~~~~~~-~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~------------~~~-~~~~~~lGa------~~~i~~~ 204 (321)
T 3tqh_A 145 LNQAEVK-QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS------------KRN-HAFLKALGA------EQCINYH 204 (321)
T ss_dssp HHHTTCC-TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC------------HHH-HHHHHHHTC------SEEEETT
T ss_pred HHhcCCC-CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec------------cch-HHHHHHcCC------CEEEeCC
Confidence 3433333 688999997 999999999999999999986643 233 233333331 01111 0
Q ss_pred Ccc-ccc--cCceEEeeCCccCcccccchhcc--CceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 127 SKE-FWS--IPCDILIPAAIEDQITINNANNV--TAKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 127 ~~~-il~--~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
..+ +.+ ..+|++++|+..... ....+.+ ..++|.=+.. ..+.....+..+++.+.
T Consensus 205 ~~~~~~~~~~g~D~v~d~~g~~~~-~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~~~~~~~ 264 (321)
T 3tqh_A 205 EEDFLLAISTPVDAVIDLVGGDVG-IQSIDCLKETGCIVSVPTI--TAGRVIEVAKQKHRRAF 264 (321)
T ss_dssp TSCHHHHCCSCEEEEEESSCHHHH-HHHGGGEEEEEEEEECCST--THHHHHHHHHHTTCEEE
T ss_pred CcchhhhhccCCCEEEECCCcHHH-HHHHHhccCCCEEEEeCCC--CchhhhhhhhhcceEEE
Confidence 111 111 479999999876544 3333333 3555543321 11222223456677665
No 359
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=93.50 E-value=0.071 Score=45.36 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=34.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++|.|. |.+|+++++.|.+.|++|+ +.| .+.+.+.+..++
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 45 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVC-FID----------IDEKRSADFAKE 45 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHh
Confidence 3678999986 7899999999999999988 556 456666555544
No 360
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.42 E-value=0.2 Score=44.79 Aligned_cols=33 Identities=24% Similarity=0.479 Sum_probs=29.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.|.+|+|+|. |.+|..+++++...|++|+++..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 6899999998 99999999999999999986554
No 361
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.36 E-value=0.31 Score=43.24 Aligned_cols=73 Identities=19% Similarity=0.167 Sum_probs=44.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCC-CCceecCCCccccccCc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDF-NEGEKINDSKEFWSIPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~-~~~~~~~~~~~il~~~~ 135 (262)
++|+|+|.|.||..++..|...|. .|+ +.| +|.+++............+ +..+...+..+.+ .+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~-L~D----------~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~-~~a 68 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELV-LVD----------RDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSEL-ADA 68 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC----------SSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGG-TTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe----------CCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHh-CCC
Confidence 489999999999999999999987 766 777 5665544322211111111 1222111122233 489
Q ss_pred eEEeeCCc
Q psy14499 136 DILIPAAI 143 (262)
Q Consensus 136 DIlipaa~ 143 (262)
|++|.|+.
T Consensus 69 DvVIi~~~ 76 (304)
T 2v6b_A 69 QVVILTAG 76 (304)
T ss_dssp SEEEECC-
T ss_pred CEEEEcCC
Confidence 99999984
No 362
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.35 E-value=0.31 Score=43.59 Aligned_cols=39 Identities=23% Similarity=0.362 Sum_probs=31.3
Q ss_pred HHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 49 ASKINLNIINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 49 ~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++..+.. .|.+|+|+|.|.||..+++++...|+ +|+ ++|
T Consensus 159 l~~~~~~-~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi-~~~ 198 (352)
T 3fpc_A 159 AELANIK-LGDTVCVIGIGPVGLMSVAGANHLGAGRIF-AVG 198 (352)
T ss_dssp HHHTTCC-TTCCEEEECCSHHHHHHHHHHHTTTCSSEE-EEC
T ss_pred HHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEE-EEC
Confidence 3443443 67899999999999999999999999 677 455
No 363
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.33 E-value=0.26 Score=44.13 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=28.4
Q ss_pred CC--CeEEEEcC-CHHHHHHHHHHHHCCC-EEEEEe
Q psy14499 57 IN--SKISIQGF-GNVGSVAANLFFKAGA-KIVAIQ 88 (262)
Q Consensus 57 ~~--~~v~IqGf-G~VG~~~a~~L~~~g~-~vv~V~ 88 (262)
.+ .+|+|.|. |.+|..+++++...|+ +|+++.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~ 193 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC 193 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 56 89999998 9999999999999999 888443
No 364
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.31 E-value=0.25 Score=44.11 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=28.5
Q ss_pred CCCeEEEEcCC-HHHHHHHHHHHHC-CCEEEEEeC
Q psy14499 57 INSKISIQGFG-NVGSVAANLFFKA-GAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG-~VG~~~a~~L~~~-g~~vv~V~D 89 (262)
.+.+|+|.|.| .+|..+++++... |++|+ ++|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi-~~~ 203 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATII-GVD 203 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEE-EEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEE-EEc
Confidence 67899999998 9999999999998 99988 444
No 365
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.30 E-value=0.18 Score=44.69 Aligned_cols=75 Identities=27% Similarity=0.269 Sum_probs=46.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCC--Ccee-cCCCcccccc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAG--AKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFN--EGEK-INDSKEFWSI 133 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g--~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~--~~~~-~~~~~~il~~ 133 (262)
++|+|+|.|++|..++..|.+.| ..|+ +.| .+.+++.......+....+. ..+. .++. +.+ .
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~-l~d----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~-~ 68 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYV-FID----------ANEAKVKADQIDFQDAMANLEAHGNIVINDW-AAL-A 68 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG-T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEc----------CCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh-C
Confidence 48999999999999999999888 5665 777 56655544432211000010 1121 1212 333 4
Q ss_pred CceEEeeCCccCc
Q psy14499 134 PCDILIPAAIEDQ 146 (262)
Q Consensus 134 ~~DIlipaa~~~~ 146 (262)
+||++|-|.....
T Consensus 69 ~aDvViiav~~~~ 81 (309)
T 1hyh_A 69 DADVVISTLGNIK 81 (309)
T ss_dssp TCSEEEECCSCGG
T ss_pred CCCEEEEecCCcc
Confidence 8999999987543
No 366
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.29 E-value=0.27 Score=43.55 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=28.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+.+|+|.|. |.+|+.+++++...|++|++ +|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~-~~ 177 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVG-AA 177 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEE-EE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEE-Ee
Confidence 6889999998 99999999999999999884 44
No 367
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.053 Score=46.33 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=30.3
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~ 38 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVL-GLD 38 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 4678999999996 7899999999999999988 554
No 368
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.28 E-value=0.26 Score=44.66 Aligned_cols=31 Identities=39% Similarity=0.531 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEE
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAI 87 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V 87 (262)
.+.+|+|+|.|.||..++++++..|+ +|+++
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~ 224 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGI 224 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 68899999999999999999999999 77744
No 369
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=93.23 E-value=0.36 Score=48.37 Aligned_cols=30 Identities=27% Similarity=0.498 Sum_probs=28.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++|+|+|.|.+|+.+|..+...|+.|+ +.|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~-l~D 346 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVV-AVE 346 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEE-EEC
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchh-ccc
Confidence 699999999999999999999999998 888
No 370
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=93.18 E-value=0.28 Score=42.63 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+|+|++++|.|. +.+|+++|+.|.+.|++|+ ++|.
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vv-i~~r 41 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVV-CAAR 41 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEE-EEeC
Confidence 789999999997 5699999999999999988 7774
No 371
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=93.13 E-value=0.083 Score=45.62 Aligned_cols=35 Identities=29% Similarity=0.520 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 42 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVV-LAD 42 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEc
Confidence 4688999999996 8899999999999999988 555
No 372
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=93.12 E-value=0.1 Score=45.36 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=34.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~~ 71 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVA-LAG----------RRLDALQETAAE 71 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHHH
Confidence 467889999986 7899999999999999988 555 356666665544
No 373
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=93.11 E-value=0.26 Score=45.47 Aligned_cols=45 Identities=22% Similarity=0.358 Sum_probs=37.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHC-CCEEEEEe-CCCceeeCCCCCCHHHHHHHHHhcC
Q psy14499 59 SKISIQGF-GNVGSVAANLFFKA-GAKIVAIQ-DDKTTIYNPNGFNIPKLQKYVTFTR 113 (262)
Q Consensus 59 ~~v~IqGf-G~VG~~~a~~L~~~-g~~vv~V~-D~~G~i~~~~GlD~~~l~~~~~~~g 113 (262)
++|+|.|+ |.+|+..++.+.++ +++|++++ + -|++.|.+..++.+
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~----------~n~~~l~~q~~~f~ 51 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH----------SNLELAFKIVKEFN 51 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES----------SCHHHHHHHHHHHT
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc----------CCHHHHHHHHHHcC
Confidence 78999995 99999999999887 68999994 5 68888888766554
No 374
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.10 E-value=0.095 Score=49.41 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=31.8
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++|+|+|.|.||...++.|.+.|++|+ |.|
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~-vi~ 42 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLT-VNA 42 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEE-EEE
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEE-EEc
Confidence 46889999999999999999999999999988 544
No 375
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.10 E-value=0.43 Score=43.20 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=45.9
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCc-eec-CCCccc
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEG-EKI-NDSKEF 130 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~-~~~-~~~~~i 130 (262)
....++|+|+|.|.||..++..|...|. .++ +.| ++.+++............|+.. ..+ .+..+-
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~-L~D----------i~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~ 84 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELA-LVD----------VIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV 84 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC----------SCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEE-EEe----------CChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH
Confidence 3567899999999999999999988886 555 778 5665443322111101112211 111 111222
Q ss_pred cccCceEEeeCCc
Q psy14499 131 WSIPCDILIPAAI 143 (262)
Q Consensus 131 l~~~~DIlipaa~ 143 (262)
+ .+|||+|-++.
T Consensus 85 ~-~~aDiVvi~aG 96 (331)
T 4aj2_A 85 T-ANSKLVIITAG 96 (331)
T ss_dssp G-TTEEEEEECCS
T ss_pred h-CCCCEEEEccC
Confidence 3 69999987764
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.08 E-value=0.2 Score=45.00 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.5
Q ss_pred CCCeEEEE-cCCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQ-GFGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~Iq-GfG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.+.+|+|. |.|.+|..+++++...|++|+++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~ 199 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATA 199 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68899999 689999999999999999988553
No 377
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=93.07 E-value=0.086 Score=45.70 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=29.5
Q ss_pred CCCCCeEEEEcC-CH--HHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GN--VGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~--VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |. +|+++|+.|.+.|++|+ ++|
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~ 59 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELA-FTY 59 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEE-Eee
Confidence 578999999996 55 99999999999999988 554
No 378
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.03 E-value=0.24 Score=43.88 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=56.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCce---ecCCCccccccC
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGE---KINDSKEFWSIP 134 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~---~~~~~~~il~~~ 134 (262)
.++|+|+|.|++|..++..|. .|..|+ +.++ +.+.+..+.+..-.+.. ++.. .++...+. ..+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~-~~~r----------~~~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~-~~~ 67 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVT-VVTR----------RQEQAAAIQSEGIRLYK-GGEEFRADCSADTSI-NSD 67 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEE-EECS----------CHHHHHHHHHHCEEEEE-TTEEEEECCEEESSC-CSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceE-EEEC----------CHHHHHHHHhCCceEec-CCCeecccccccccc-cCC
Confidence 378999999999999999999 999887 5452 34444444433212211 1111 11100112 247
Q ss_pred ceEEeeCCccCcccccchhcc---CceEEEecCCCCCCH
Q psy14499 135 CDILIPAAIEDQITINNANNV---TAKIILEGANGPTTT 170 (262)
Q Consensus 135 ~DIlipaa~~~~it~e~a~~~---~~kiIve~AN~p~t~ 170 (262)
+|++|-|.....+ .+.++.+ ....|+-..|+--..
T Consensus 68 ~D~vilavK~~~~-~~~l~~l~~~~~~~ivs~~nGi~~~ 105 (307)
T 3ego_A 68 FDLLVVTVKQHQL-QSVFSSLERIGKTNILFLQNGMGHI 105 (307)
T ss_dssp CSEEEECCCGGGH-HHHHHHTTSSCCCEEEECCSSSHHH
T ss_pred CCEEEEEeCHHHH-HHHHHHhhcCCCCeEEEecCCccHH
Confidence 9999998765433 2233333 222377888876443
No 379
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=93.00 E-value=0.089 Score=44.64 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=30.1
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEE
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V 87 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~ 42 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLL 42 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 3678999999986 899999999999999999844
No 380
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=92.97 E-value=0.17 Score=45.01 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccc-cC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWS-IP 134 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~-~~ 134 (262)
...+++|+|+ |+.|+.+++.|.+.|+++++-.+.+.. |- .+. +...+++.+++.+ .+
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~-----g~-------------~i~---G~~vy~sl~el~~~~~ 70 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKG-----GQ-------------NVH---GVPVFDTVKEAVKETD 70 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCT-----TC-------------EET---TEEEESSHHHHHHHHC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCC-----Cc-------------eEC---CEeeeCCHHHHhhcCC
Confidence 3467889999 999999999999999986644443200 00 011 2222332334442 27
Q ss_pred ceEEeeCCccCccc--ccchhccCceEEEe-cCCCCCC--HHHHHHHHHCCCeEe
Q psy14499 135 CDILIPAAIEDQIT--INNANNVTAKIILE-GANGPTT--TEADDILRDKGIILA 184 (262)
Q Consensus 135 ~DIlipaa~~~~it--~e~a~~~~~kiIve-~AN~p~t--~ea~~~l~~rgi~~i 184 (262)
+|+.+.+++....- -+.+-+.+.+.++. ....+.. .+..+..+++|+.++
T Consensus 71 ~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 71 ANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 89999888754321 12233346774443 3332221 244566677888666
No 381
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=92.97 E-value=1.3 Score=40.66 Aligned_cols=98 Identities=15% Similarity=0.328 Sum_probs=58.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHH-----CCCEEEEEeCCCceeeCCCCCCHHHHHHHHH---hcCCccC---C--------
Q psy14499 58 NSKISIQGFGNVGSVAANLFFK-----AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT---FTRSIKD---F-------- 118 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~-----~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~---~~g~~~~---~-------- 118 (262)
..||.|-|||.+|+.+.|.|.+ ....||+|-|. -.|++.+.-+.+ .+|.+.+ .
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~--------~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~ 73 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDM--------NTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVA 73 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECS--------SCCHHHHHHHHHEETTTEECSSCEEEECSCTTSS
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecC--------CCCHHHHHHHhcccCCCCCEeeEEEecccccccC
Confidence 3589999999999999998433 25789999883 157776544443 2232211 0
Q ss_pred CC------cee---c---CCCccc-c-ccCceEEeeCCccCcccccchhcc---Cce-EEEecC
Q psy14499 119 NE------GEK---I---NDSKEF-W-SIPCDILIPAAIEDQITINNANNV---TAK-IILEGA 164 (262)
Q Consensus 119 ~~------~~~---~---~~~~~i-l-~~~~DIlipaa~~~~it~e~a~~~---~~k-iIve~A 164 (262)
.+ ++. . .+++++ | +.++|++++|+. ...+.+-+... .|| +|+.+.
T Consensus 74 ~~~~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG-~f~s~e~A~~hl~aGAkkViISap 136 (359)
T 3ids_C 74 KDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTG-LFTAKAAAEGHLRGGARKVVISAP 136 (359)
T ss_dssp SCCEEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSS-SCCBHHHHTHHHHTTCCEEEESSC
T ss_pred CCCEEEECCEEEEEEEccCCcccCCccccCccEEEEecc-ccCCHHHHHHHHHcCCCEEEECCC
Confidence 00 111 1 013322 2 458899999984 44566665554 465 666554
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.94 E-value=0.7 Score=41.21 Aligned_cols=31 Identities=35% Similarity=0.503 Sum_probs=29.1
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEE
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.+|+|+| .|.||..+++++...|++|+++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~ 181 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT 181 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE
Confidence 688999999 7999999999999999999977
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.94 E-value=0.15 Score=44.93 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=31.0
Q ss_pred HHhCCCCC-CCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 50 SKINLNII-NSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 50 ~~~g~~l~-~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++.+..+. +. |+|+|. |.||..++++++..|++|+++..
T Consensus 139 ~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~ 179 (324)
T 3nx4_A 139 EDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSG 179 (324)
T ss_dssp HHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred hhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 44455443 35 999998 99999999999999999996653
No 384
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.94 E-value=0.19 Score=44.97 Aligned_cols=76 Identities=22% Similarity=0.174 Sum_probs=46.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHHhc-CCccCCCCceecCCCccccccCc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVTFT-RSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~-g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
++|+|+|.|++|..++..|.+.|. .|+ +.| .+.+++....... ..+.-.+......+..+.+ .+|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~-l~D----------~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~-~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMV-LID----------VDKKRAEGDALDLIHGTPFTRRANIYAGDYADL-KGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGG-TTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEe----------CChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHh-CCC
Confidence 479999999999999999999887 776 677 5655554432210 0000001111111122233 589
Q ss_pred eEEeeCCccCc
Q psy14499 136 DILIPAAIEDQ 146 (262)
Q Consensus 136 DIlipaa~~~~ 146 (262)
|++|.|.....
T Consensus 69 DvViiav~~~~ 79 (319)
T 1a5z_A 69 DVVIVAAGVPQ 79 (319)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEEccCCCC
Confidence 99999987543
No 385
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.85 E-value=0.3 Score=43.23 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=29.0
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.+.+|+|.| .|.+|..+++++...|++|+++.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 172 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTV 172 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 688999999 79999999999999999998554
No 386
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.78 E-value=0.43 Score=42.39 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=28.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEE
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.+|+|.|. |.+|+.+++++...|++|+++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~ 186 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGS 186 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 6889999997 999999999999999998844
No 387
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.66 E-value=0.2 Score=42.77 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcC-C-HHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-G-NVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G-~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. | .+|+++++.|.+.|++|+ +.|
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~-~~~ 54 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVV-ISD 54 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEE-Eec
Confidence 478999999998 8 599999999999999988 555
No 388
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=92.62 E-value=0.12 Score=43.12 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=27.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~-~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVG-LMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEE
Confidence 5678999985 8999999999999999988 444
No 389
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.56 E-value=0.14 Score=45.64 Aligned_cols=31 Identities=29% Similarity=0.364 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
++|+|+|.|.+|..+|..|.+.|++|+ |.|+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~-v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVT-IYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEE-EEec
Confidence 689999999999999999999999988 8875
No 390
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.49 E-value=0.31 Score=43.99 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=28.8
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.+.+|+|+| .|.+|..+++++...|++|+++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 195 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTC 195 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEE
Confidence 688999999 79999999999999999988543
No 391
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.45 E-value=0.49 Score=42.53 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++.++|+|+|.|.||..++..|...+. .++ +.|
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~-l~D 36 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVV-LFD 36 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEE-EEe
Confidence 456799999999999999999988876 655 777
No 392
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=92.45 E-value=0.14 Score=50.01 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
.+++.+|+|+|.|.+|..+++.|...|..-+.+.|.
T Consensus 324 kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~ 359 (598)
T 3vh1_A 324 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 359 (598)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 578999999999999999999999999877779984
No 393
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.45 E-value=0.37 Score=42.56 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=54.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcC-CccCC-CCc-----eecCCCcccc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTR-SIKDF-NEG-----EKINDSKEFW 131 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g-~~~~~-~~~-----~~~~~~~~il 131 (262)
++|+|+|.|++|..++..|.+.|..|+ +.+++ ..++ .. +.| .+... ++. ...++.++ .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~-~~~r~---------~~~~---i~-~~g~~~~~~~g~~~~~~~~~~~~~~~-~ 67 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVH-FLLRR---------DYEA---IA-GNGLKVFSINGDFTLPHVKGYRAPEE-I 67 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEE-EECST---------THHH---HH-HTCEEEEETTCCEEESCCCEESCHHH-H
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEE-EEEcC---------cHHH---HH-hCCCEEEcCCCeEEEeeceeecCHHH-c
Confidence 689999999999999999999999877 44421 1222 22 222 11110 111 11121222 2
Q ss_pred ccCceEEeeCCccCcccccchhcc-----CceEEEecCCCCC
Q psy14499 132 SIPCDILIPAAIEDQITINNANNV-----TAKIILEGANGPT 168 (262)
Q Consensus 132 ~~~~DIlipaa~~~~it~e~a~~~-----~~kiIve~AN~p~ 168 (262)
.++|+++-|.....+. +.++.+ ...+|+-..|+--
T Consensus 68 -~~~D~vilavk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 68 -GPMDLVLVGLKTFANS-RYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp -CCCSEEEECCCGGGGG-GHHHHHGGGCCTTCEEEECCSSSS
T ss_pred -CCCCEEEEecCCCCcH-HHHHHHHhhcCCCCEEEEecCCCC
Confidence 4899999998765543 333333 2457888888854
No 394
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=92.45 E-value=0.31 Score=42.04 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=30.7
Q ss_pred CCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 53 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 53 g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
..++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 42 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVM-IVG 42 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 35788999999996 8899999999999999988 556
No 395
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=92.44 E-value=0.36 Score=41.11 Aligned_cols=35 Identities=31% Similarity=0.408 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIV-LVA 38 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEc
Confidence 4678999999996 8899999999999999988 445
No 396
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.43 E-value=0.52 Score=42.23 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=29.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++.++|+|+|.|.||..++..|...|. .++ +.|
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~-l~D 39 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVV-LVD 39 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEe
Confidence 456799999999999999999999998 766 777
No 397
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.40 E-value=0.94 Score=40.78 Aligned_cols=109 Identities=14% Similarity=0.161 Sum_probs=60.0
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHH-CCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceecCCCcccc-
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFK-AGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKINDSKEFW- 131 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~-~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~~~~~~il- 131 (262)
.+.+|+|+| .|.||..+++++.. .|++|+++ | .+.+++...++ .|. +-++.+ .+ .+.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~-~----------~~~~~~~~~~~-lGad~vi~~~~--~~--~~~v~~ 234 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIAT-A----------SRPETQEWVKS-LGAHHVIDHSK--PL--AAEVAA 234 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEE-C----------SSHHHHHHHHH-TTCSEEECTTS--CH--HHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEE-e----------CCHHHHHHHHH-cCCCEEEeCCC--CH--HHHHHH
Confidence 688999999 89999999999987 68999854 4 24455433332 331 111110 00 01122
Q ss_pred --ccCceEEeeCCccCcccccchhcc--CceEEEecCCCCCCHHHHHHHHHCCCeEe
Q psy14499 132 --SIPCDILIPAAIEDQITINNANNV--TAKIILEGANGPTTTEADDILRDKGIILA 184 (262)
Q Consensus 132 --~~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~p~t~ea~~~l~~rgi~~i 184 (262)
...+|++++|+.....-.+..+.+ ..++|.=+...++... .+..+++.+.
T Consensus 235 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~---~~~~k~~~i~ 288 (363)
T 4dvj_A 235 LGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIM---LFKRKAVSIH 288 (363)
T ss_dssp TCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCSSCCGG---GGTTTTCEEE
T ss_pred hcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCCccchH---HHhhccceEE
Confidence 136899999987542222222223 4666655443333321 2344555553
No 398
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.38 E-value=0.086 Score=45.67 Aligned_cols=36 Identities=31% Similarity=0.561 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 91 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~ 91 (262)
+++.+|+|+|.|.+|..+++.|.+.|..-+.+.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999999999999999998777788853
No 399
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.37 E-value=0.35 Score=40.77 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~-~~~ 40 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVV-VAD 40 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEc
Confidence 4678999999996 8899999999999999988 555
No 400
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.36 E-value=0.38 Score=42.94 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHH----HHHhcCCccCCCCceecCCCccc
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQK----YVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~----~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
+-++|+|+|.|.||..++..|...+. .++ ..| +|.+++.. +... ...... ..+...+..+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~-l~D----------i~~~~~~~~~~dl~~~-~~~~~~-~~~i~~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIV-LID----------ANESKAIGDAMDFNHG-KVFAPK-PVDIWHGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEE-EEC----------SSHHHHHHHHHHHHHH-TTSSSS-CCEEEECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEE-EEe----------CCcchHHHHHhhHHHH-hhhcCC-CeEEEcCcHHH
Confidence 34699999999999999999887664 555 667 55543322 1111 111110 12211212333
Q ss_pred cccCceEEeeCCccC
Q psy14499 131 WSIPCDILIPAAIED 145 (262)
Q Consensus 131 l~~~~DIlipaa~~~ 145 (262)
+ .+||++|.|+...
T Consensus 72 l-~~aDvViia~~~~ 85 (316)
T 1ldn_A 72 C-RDADLVVICAGAN 85 (316)
T ss_dssp T-TTCSEEEECCSCC
T ss_pred h-CCCCEEEEcCCCC
Confidence 3 5999999997543
No 401
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.34 E-value=0.16 Score=43.68 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+.++|+|.|.|-+|+++++.|.+.|++|+++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 467999999999999999999999999997764
No 402
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.27 E-value=0.44 Score=42.83 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEe
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~ 88 (262)
.+.+|+|+|.|.||..++++++.. |++|+++.
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~ 218 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 218 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 678999999999999999999988 99988554
No 403
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.18 E-value=0.18 Score=43.14 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=29.2
Q ss_pred CCCCeEEEEcC---CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 56 IINSKISIQGF---GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGf---G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~-~~~ 42 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELA-FTY 42 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEE-EEc
Confidence 67899999997 6899999999999999988 444
No 404
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.17 E-value=0.2 Score=45.80 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=25.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHH-CCCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFK-AGAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~-~g~~vv~V~D 89 (262)
++|+|+|.|++|..+|..|.+ .|..|+ +.|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~-~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVR-VLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEE-EEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEE-EEe
Confidence 589999999999999999988 498877 444
No 405
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.13 E-value=0.17 Score=48.46 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=64.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcccc----c
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFW----S 132 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il----~ 132 (262)
...+++|+|+|.+|+.+++.|.+.|..++ +.| -|++.+.+..+..+...-+-++. ..+.| -
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~vv-vid----------~~~~~~~~~~~~~~~~~i~Gd~~----~~~~L~~a~i 190 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHLFV-VVT----------DNYDQALHLEEQEGFKVVYGSPT----DAHVLAGLRV 190 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCCEE-EEE----------SCHHHHHHHHHSCSSEEEESCTT----CHHHHHHTTG
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCCEE-EEE----------CCHHHHHHHHHhcCCeEEEeCCC----CHHHHHhcCc
Confidence 45689999999999999999999999988 667 57877766665412100000111 12222 1
Q ss_pred cCceEEeeCCccCcccc---cchhcc-CceEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 133 IPCDILIPAAIEDQITI---NNANNV-TAKIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~---e~a~~~-~~kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
.++|.++- +..+..|- -.++++ ..++|+... +++-.+.|++.|+.
T Consensus 191 ~~a~~vi~-t~~D~~n~~~~~~ar~~~~~~iiar~~----~~~~~~~l~~~Gad 239 (565)
T 4gx0_A 191 AAARSIIA-NLSDPDNANLCLTVRSLCQTPIIAVVK----EPVHGELLRLAGAN 239 (565)
T ss_dssp GGCSEEEE-CSCHHHHHHHHHHHHTTCCCCEEEECS----SGGGHHHHHHHTCS
T ss_pred ccCCEEEE-eCCcHHHHHHHHHHHHhcCceEEEEEC----CHHHHHHHHHcCCC
Confidence 47888885 55443332 223333 345666543 34556677777774
No 406
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.13 E-value=0.065 Score=46.21 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=28.0
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 58 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVI-ISY 58 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEE-EEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 3678999999996 8899999999999999988 555
No 407
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.05 E-value=0.44 Score=42.54 Aligned_cols=32 Identities=25% Similarity=0.168 Sum_probs=28.8
Q ss_pred CCeEEEEcCCHHHHH-HHHHHHHCCCEEEEEeCC
Q psy14499 58 NSKISIQGFGNVGSV-AANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~-~a~~L~~~g~~vv~V~D~ 90 (262)
.++|.|+|.|..|.+ +|++|.+.|++|. ++|.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~-~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVS-GCDA 36 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEE-EEcC
Confidence 468999999999995 9999999999987 8885
No 408
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.03 E-value=0.34 Score=43.52 Aligned_cols=32 Identities=38% Similarity=0.455 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
+.++|+|+|.|.+|..+|..|...|. . |.+.|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~D 45 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFD 45 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEE
Confidence 44799999999999999999999998 7 44778
No 409
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.03 E-value=0.56 Score=41.62 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=44.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHH----HHHHhcCCccCCC-Cceec-CCCccc
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQ----KYVTFTRSIKDFN-EGEKI-NDSKEF 130 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~----~~~~~~g~~~~~~-~~~~~-~~~~~i 130 (262)
++|+|+|.|.||..++..|...|. .++ +.| ++.+++. ++..... .|+ ..+.. .+..+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~-L~D----------~~~~~~~g~~~dl~~~~~---~~~~~~~i~~t~d~~a 66 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIA-LVD----------IAEDLAVGEAMDLAHAAA---GIDKYPKIVGGADYSL 66 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEE-EEC----------SSHHHHHHHHHHHHHHHH---TTTCCCEEEEESCGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEE----------CChHHHHHHHHHHHhhhh---hcCCCCEEEEeCCHHH
Confidence 489999999999999999988886 665 777 5665543 1111110 121 11211 112333
Q ss_pred cccCceEEeeCCcc
Q psy14499 131 WSIPCDILIPAAIE 144 (262)
Q Consensus 131 l~~~~DIlipaa~~ 144 (262)
+ .++|++|-++..
T Consensus 67 ~-~~aDiVViaag~ 79 (294)
T 1oju_A 67 L-KGSEIIVVTAGL 79 (294)
T ss_dssp G-TTCSEEEECCCC
T ss_pred h-CCCCEEEECCCC
Confidence 3 589999988754
No 410
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.03 E-value=0.11 Score=46.78 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
+.++|+|+|.|.+|..++..|...|. . |.+.|
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D 40 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELAD-VVLYD 40 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEE
Confidence 34689999999999999999999887 7 44777
No 411
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=92.01 E-value=0.11 Score=44.81 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=28.3
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEe
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~ 88 (262)
++++++++|.|. |.+|+++++.|.+.|++|+.+.
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 357889999986 8899999999999999998443
No 412
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=91.99 E-value=0.77 Score=41.17 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=65.8
Q ss_pred ecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCCceeeCCC
Q psy14499 21 TGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFG--NVGSVAANLFFKAGAKIVAIQDDKTTIYNPN 98 (262)
Q Consensus 21 tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG--~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~ 98 (262)
.+.|+-.||..+.-+--+..=+..+++ +.| +++|++|+++|=| +|..+++..+..+|+++. ++- |.
T Consensus 115 ~~vPVINa~~~~~HPtQaLaDl~Ti~e---~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~-~~~-------P~ 182 (307)
T 2i6u_A 115 ATVPVINALSDEFHPCQVLADLQTIAE---RKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVT-VAA-------PE 182 (307)
T ss_dssp CSSCEEESCCSSCCHHHHHHHHHHHHH---HHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEC-------CT
T ss_pred CCCCEEcCCCCCcCccHHHHHHHHHHH---HhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEE-EEC-------Cc
Confidence 457888888644444444444444443 334 6899999999986 999999999999999987 544 55
Q ss_pred CCCHH-HHHHH----HHhcCCccCCCCceecCCCccccccCceEEeeCCc
Q psy14499 99 GFNIP-KLQKY----VTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI 143 (262)
Q Consensus 99 GlD~~-~l~~~----~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~ 143 (262)
|+.++ .+.+. .++.|. ..+..+++++.+ .++||+.--..
T Consensus 183 ~~~~~~~~~~~~~~~a~~~G~-----~~~~~~d~~eav-~~aDvvy~~~w 226 (307)
T 2i6u_A 183 GFLPDPSVRAAAERRAQDTGA-----SVTVTADAHAAA-AGADVLVTDTW 226 (307)
T ss_dssp TSCCCHHHHHHHHHHHHHHTC-----CEEEESCHHHHH-TTCSEEEECCS
T ss_pred cccCCHHHHHHHHHHHHHcCC-----eEEEEECHHHHh-cCCCEEEecce
Confidence 55443 23322 223331 112223345555 48999987554
No 413
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.99 E-value=0.55 Score=42.42 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=30.2
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEe
Q psy14499 56 IINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 56 l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~ 88 (262)
-.|.+|+|.|. |.||..+++++...|++|++++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 47889999999 9999999999999999998775
No 414
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=91.98 E-value=0.43 Score=40.55 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLL-LFS 38 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 4578999999996 8899999999999999988 455
No 415
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=91.97 E-value=0.84 Score=39.23 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=61.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccccccCc
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEFWSIPC 135 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~il~~~~ 135 (262)
..++..|.|+ |.+|+.+++...+.+..+++..|+.+. + ++ .++
T Consensus 11 ~~~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~~~-------------------------------~---~l--~~~ 54 (228)
T 1vm6_A 11 HHMKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-------------------------------E---EL--DSP 54 (228)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-------------------------------E---EC--SCC
T ss_pred ccceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCCCc-------------------------------c---cc--cCC
Confidence 3567889997 999999999887889999999885431 0 11 268
Q ss_pred eEEeeCCccCcccc--cchhccCceEEEecCCCCCCHHHHHHHHH----CCCeEecccc
Q psy14499 136 DILIPAAIEDQITI--NNANNVTAKIILEGANGPTTTEADDILRD----KGIILAPDVI 188 (262)
Q Consensus 136 DIlipaa~~~~it~--e~a~~~~~kiIve~AN~p~t~ea~~~l~~----rgi~~iPD~~ 188 (262)
||+|+-+.+..... +.+.+.+.++|+.-.. ++++-.+.|++ .++++.|.|.
T Consensus 55 DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTTG--~~~~~~~~l~~~a~~~~vv~apNfS 111 (228)
T 1vm6_A 55 DVVIDFSSPEALPKTVDLCKKYRAGLVLGTTA--LKEEHLQMLRELSKEVPVVQAYNFS 111 (228)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHTCEEEECCCS--CCHHHHHHHHHHTTTSEEEECSCCC
T ss_pred CEEEECCCHHHHHHHHHHHHHcCCCEEEeCCC--CCHHHHHHHHHHHhhCCEEEecccc
Confidence 99999987654322 3334446677776553 55554444433 3455555553
No 416
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.96 E-value=0.33 Score=41.63 Aligned_cols=37 Identities=16% Similarity=0.402 Sum_probs=32.1
Q ss_pred hCCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 52 INLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 52 ~g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+..++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~ 41 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVL-ING 41 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 345789999999996 7899999999999999988 555
No 417
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.91 E-value=0.37 Score=43.21 Aligned_cols=30 Identities=33% Similarity=0.521 Sum_probs=26.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++|+|+|.|.||..++..|...|. . |.+.|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~D 35 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGD-VVLFD 35 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEe
Confidence 589999999999999999999987 7 54778
No 418
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.91 E-value=0.62 Score=41.29 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=64.3
Q ss_pred HHHHhCCCCCCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceec
Q psy14499 48 IASKINLNIINSKISIQGFGNVGSVAANLFFKA-GAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKI 124 (262)
Q Consensus 48 ~~~~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~ 124 (262)
+++..+.. .|.+|+|.|.|.+|..++.++... |++|+++ | .+.+++...++ .|. +-+|.+...
T Consensus 155 ~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~-~----------~~~~r~~~~~~-~Ga~~~i~~~~~~~- 220 (348)
T 4eez_A 155 AIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV-D----------INQDKLNLAKK-IGADVTINSGDVNP- 220 (348)
T ss_dssp HHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEE-E----------SCHHHHHHHHH-TTCSEEEEC-CCCH-
T ss_pred eecccCCC-CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEE-E----------CcHHHhhhhhh-cCCeEEEeCCCCCH-
Confidence 34444443 678999999999999999998875 7888854 4 24555433333 221 111111110
Q ss_pred CCCcccc----ccCceEEeeCCccCcccccchhcc--CceEEEecCCC-CCCHHHHHHHHHCCCeEec
Q psy14499 125 NDSKEFW----SIPCDILIPAAIEDQITINNANNV--TAKIILEGANG-PTTTEADDILRDKGIILAP 185 (262)
Q Consensus 125 ~~~~~il----~~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~-p~t~ea~~~l~~rgi~~iP 185 (262)
.+++. ..++|+.++|+.....-......+ ..+++.-|.-. +.+... ..+..+++.+..
T Consensus 221 --~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g 285 (348)
T 4eez_A 221 --VDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSV-PTVVFDGVEVAG 285 (348)
T ss_dssp --HHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECH-HHHHHSCCEEEE
T ss_pred --HHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCH-HHHHhCCeEEEE
Confidence 01222 247899999886543222333333 35555544322 222222 234556777653
No 419
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.86 E-value=0.23 Score=42.30 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=29.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~-~~~ 38 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVF-AGR 38 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 4678999999996 7899999999999999988 555
No 420
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.84 E-value=0.097 Score=46.66 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=27.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCC
Q psy14499 58 NSKISIQGFGNVGSVAANLFFKAGA-KIVAIQDD 90 (262)
Q Consensus 58 ~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D~ 90 (262)
.++|+|+|.|.+|..++..|.+.|. .|+ +.|.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~-l~D~ 36 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVV-LFDI 36 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEE-EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEE-EEeC
Confidence 4689999999999999999999897 754 7773
No 421
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.81 E-value=0.21 Score=42.84 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=27.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
++|.|+|.|++|..++..|.+.|..|+ +.|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQ-GWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEE-EEEc
Confidence 479999999999999999999999887 5554
No 422
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.81 E-value=0.33 Score=44.00 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D 89 (262)
..++|+|+|.|.||+.++..|...|. .++ +.|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~-L~D 53 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVA-LVD 53 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEE-EEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEE
Confidence 46899999999999999999988886 555 778
No 423
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.77 E-value=0.54 Score=41.99 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHH--hcCCccCC-CCceecCCCccc
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDF-NEGEKINDSKEF 130 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~--~~g~~~~~-~~~~~~~~~~~i 130 (262)
++.++|+|+|.|+||..++..|...+. .++ ..| +|.+++..... ... .... ...+...+..+.
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~-L~D----------i~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a 71 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELV-IID----------LDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSD 71 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEE-EEC----------SCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe----------CChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHH
Confidence 356799999999999999999887774 444 777 56654432111 111 1111 111211113333
Q ss_pred cccCceEEeeCCccC
Q psy14499 131 WSIPCDILIPAAIED 145 (262)
Q Consensus 131 l~~~~DIlipaa~~~ 145 (262)
+ .+||++|-++...
T Consensus 72 ~-~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 72 C-HDADLVVICAGAA 85 (317)
T ss_dssp G-TTCSEEEECCCCC
T ss_pred h-CCCCEEEECCCCC
Confidence 4 5999999887643
No 424
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=91.68 E-value=0.44 Score=40.42 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 43 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVI-LLG 43 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 7899999999999999988 555
No 425
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.65 E-value=0.5 Score=42.40 Aligned_cols=31 Identities=26% Similarity=0.288 Sum_probs=28.2
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEE
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.+|+|.| .|.+|..+++++...|++|+++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~ 193 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT 193 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 688999999 7999999999999999998854
No 426
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.62 E-value=0.43 Score=41.65 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~-~~~ 80 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVA-INY 80 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 7899999999999999988 655
No 427
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.62 E-value=0.48 Score=40.52 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 39 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVA-FCA 39 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 4688999999996 7899999999999999988 556
No 428
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=91.60 E-value=0.47 Score=40.41 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=30.6
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIA-LLD 38 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 3578999999986 8899999999999999988 555
No 429
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=91.59 E-value=0.4 Score=39.99 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEE
Q psy14499 53 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 53 g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V 87 (262)
..++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~ 37 (248)
T 2pnf_A 2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIIT 37 (248)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 34678999999986 899999999999999998844
No 430
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=91.55 E-value=0.39 Score=40.28 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~-~~~ 45 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVV-LLG 45 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 8899999999999999988 555
No 431
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.54 E-value=0.7 Score=40.61 Aligned_cols=32 Identities=34% Similarity=0.484 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D 89 (262)
+.++|+|+|.|.||..++..|.+.|. .|+ +.|
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d 39 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LED 39 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 34699999999999999999999997 776 667
No 432
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.51 E-value=0.076 Score=45.89 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=29.0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEE
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.-++|.|+|.|++|.++++.|.+.|.+|+++
T Consensus 3 ~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~ 35 (232)
T 3dfu_A 3 QAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVL 35 (232)
T ss_dssp CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEEC
T ss_pred CCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEe
Confidence 345579999999999999999999999998853
No 433
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.48 E-value=0.2 Score=44.59 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCCeEEEEcCC-HHHHHHHHHHHHCCCEEEEEe
Q psy14499 57 INSKISIQGFG-NVGSVAANLFFKAGAKIVAIQ 88 (262)
Q Consensus 57 ~~~~v~IqGfG-~VG~~~a~~L~~~g~~vv~V~ 88 (262)
.|.+|+|+|.| .+|..+++++...|++|+++.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 176 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEe
Confidence 68899999997 999999999999999998654
No 434
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=91.47 E-value=0.2 Score=45.55 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=27.6
Q ss_pred CCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEeC
Q psy14499 58 NSKISIQG-FGNVGSVAANLFFKA-GAKIVAIQD 89 (262)
Q Consensus 58 ~~~v~IqG-fG~VG~~~a~~L~~~-g~~vv~V~D 89 (262)
.+||+|.| +|.+|+.+++.|.+. ...++++.+
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 36899999 999999999999876 478888874
No 435
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.47 E-value=0.78 Score=40.78 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEE
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V 87 (262)
.+.+|+|+|.|.||..++++++.. +.+|+++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~ 202 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAV 202 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 688999999999999999999887 7888855
No 436
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=91.46 E-value=0.51 Score=39.95 Aligned_cols=47 Identities=26% Similarity=0.287 Sum_probs=37.4
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++| -+.+.+.+..++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 52 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVV-IVD----------RDKAGAERVAGE 52 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHH
Confidence 4678999999996 7899999999999999988 555 355666555544
No 437
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.43 E-value=0.45 Score=40.67 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
..+++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 42 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLV-LAA 42 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEE-EEe
Confidence 4578999999997 6799999999999999988 555
No 438
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=91.43 E-value=0.37 Score=40.97 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=29.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 38 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVV-LIA 38 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEE-EEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEE
Confidence 4578999999996 8899999999999999988 555
No 439
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=91.36 E-value=0.55 Score=40.08 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 38 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVV-FGD 38 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 3578999999995 8899999999999999988 445
No 440
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=91.35 E-value=0.38 Score=41.52 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=31.1
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++|+.|.+.|++|+ ++|
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~-~~~ 57 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARIL-ING 57 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-ECC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 3689999999996 7899999999999999988 666
No 441
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=91.35 E-value=0.34 Score=41.67 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi-~~~----------r~~~~~~~~~~~ 73 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVV-IAD----------LAAEKGKALADE 73 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEe----------CChHHHHHHHHH
Confidence 578999999996 7899999999999999988 556 356666555544
No 442
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.34 E-value=1.1 Score=41.97 Aligned_cols=112 Identities=14% Similarity=0.216 Sum_probs=70.7
Q ss_pred HHHHhCCCCCCCeEEEEcCC----------HHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccC
Q psy14499 48 IASKINLNIINSKISIQGFG----------NVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKD 117 (262)
Q Consensus 48 ~~~~~g~~l~~~~v~IqGfG----------~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~ 117 (262)
+.+.++.+++++||+|.|+- .-...+++.|.++|++|. + |||.-. + +..+.
T Consensus 312 i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~-~-------~DP~~~--~---~~~~~------ 372 (446)
T 4a7p_A 312 VIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVK-A-------YDPEGV--E---QASKM------ 372 (446)
T ss_dssp HHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEE-E-------ECSSCH--H---HHGGG------
T ss_pred HHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEE-E-------ECCCCC--H---hHHHh------
Confidence 34556778999999999985 457899999999999987 5 445421 1 11211
Q ss_pred CCCceecCCCccccccCceEEeeCCccCc---ccccc-hhccCceEEEecCCCCCCHHHHHHHHHCCCeE
Q psy14499 118 FNEGEKINDSKEFWSIPCDILIPAAIEDQ---ITINN-ANNVTAKIILEGANGPTTTEADDILRDKGIIL 183 (262)
Q Consensus 118 ~~~~~~~~~~~~il~~~~DIlipaa~~~~---it~e~-a~~~~~kiIve~AN~p~t~ea~~~l~~rgi~~ 183 (262)
|++.+..++.++.+ .++|+++-++.-+. ++-+. ...++.++|+++-|.. .++ .+++.|..|
T Consensus 373 ~~~~~~~~~~~~~~-~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~r~~~-~~~---~~~~~g~~y 437 (446)
T 4a7p_A 373 LTDVEFVENPYAAA-DGADALVIVTEWDAFRALDLTRIKNSLKSPVLVDLRNIY-PPA---ELERAGLQY 437 (446)
T ss_dssp CSSCCBCSCHHHHH-TTBSEEEECSCCTTTTSCCHHHHHTTBSSCBEECSSCCS-CHH---HHHHTTCBC
T ss_pred cCCceEecChhHHh-cCCCEEEEeeCCHHhhcCCHHHHHHhcCCCEEEECCCCC-CHH---HHHhcCCEE
Confidence 22222222223344 48999999886543 33332 3345778999999865 333 345677655
No 443
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=91.34 E-value=0.56 Score=39.56 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~-~~~ 38 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVA-ACD 38 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 4678999999986 8999999999999999988 444
No 444
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.33 E-value=0.43 Score=40.01 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=29.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEE
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V 87 (262)
++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~ 35 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGT 35 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 578999999986 889999999999999999844
No 445
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.30 E-value=0.39 Score=40.89 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~----------r~~~~~~~~~~ 48 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVV-ITG----------RTKEKLEEAKL 48 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHH
Confidence 578999999996 7899999999999999988 556 35555555544
No 446
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.28 E-value=0.35 Score=39.77 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=26.7
Q ss_pred CCeEEEEc-CCHHHHHHHHHHH-HCCCEEEEEe
Q psy14499 58 NSKISIQG-FGNVGSVAANLFF-KAGAKIVAIQ 88 (262)
Q Consensus 58 ~~~v~IqG-fG~VG~~~a~~L~-~~g~~vv~V~ 88 (262)
-++|+|.| .|.+|+++++.|. +.|++|+++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~ 37 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYG 37 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEe
Confidence 35699999 5999999999999 8999998554
No 447
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=91.10 E-value=0.19 Score=48.16 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=28.2
Q ss_pred CCCC-CeEEEEcCCHHHHHHHHHHHHC------CCEEE
Q psy14499 55 NIIN-SKISIQGFGNVGSVAANLFFKA------GAKIV 85 (262)
Q Consensus 55 ~l~~-~~v~IqGfG~VG~~~a~~L~~~------g~~vv 85 (262)
.++| ++|+|+|+|++|.++|+.|.+. |..|+
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~Vi 87 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK 87 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEE
Confidence 3678 9999999999999999999998 99877
No 448
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=91.06 E-value=0.57 Score=39.22 Aligned_cols=34 Identities=18% Similarity=0.382 Sum_probs=29.9
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEE
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V 87 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+.+
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~ 41 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILI 41 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 3578999999986 899999999999999998844
No 449
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.06 E-value=0.41 Score=38.41 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=28.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++|+|.|. |.+|+++++.|.+.|++|+++..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3479999997 99999999999999999986653
No 450
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.05 E-value=0.44 Score=40.02 Aligned_cols=47 Identities=28% Similarity=0.410 Sum_probs=37.4
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
.++++++|+|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 57 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVI-ISG----------SNEEKLKSLGNA 57 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEc----------CCHHHHHHHHHH
Confidence 4679999999996 8899999999999999988 555 355666555543
No 451
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.03 E-value=0.43 Score=40.77 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 41 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVA-VAG 41 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 678999999985 8899999999999999988 555
No 452
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.01 E-value=0.27 Score=42.05 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+.++|+|.|.|.+|+++++.|.+.|++|++++.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 347999999999999999999999999997654
No 453
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=90.99 E-value=0.49 Score=40.90 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=48.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCcc-------
Q psy14499 58 NSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKE------- 129 (262)
Q Consensus 58 ~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~------- 129 (262)
.++|+|.|. +.+|+++|+.|.+.|++|+ ++| .|.+++.+..++.+.+..+.. .+++.++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~-~~~----------~~~~~~~~~~~~~~~~~~~~~--Dv~~~~~v~~~v~~ 68 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVC-FID----------IDEKRSADFAKERPNLFYFHG--DVADPLTLKKFVEY 68 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHTTCTTEEEEEC--CTTSHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHhcCCEEEEEe--cCCCHHHHHHHHHH
Confidence 478999985 6799999999999999988 777 577777776665443322210 0111111
Q ss_pred ccc--cCceEEeeCCc
Q psy14499 130 FWS--IPCDILIPAAI 143 (262)
Q Consensus 130 il~--~~~DIlipaa~ 143 (262)
+.+ -..||||.+|.
T Consensus 69 ~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 69 AMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 121 36899999885
No 454
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.93 E-value=0.18 Score=45.57 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=28.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++.++|+|+|.|.||..++..|...|. .++ +.|
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~-L~D 38 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVV-LFD 38 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EEC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEE-EEe
Confidence 466799999999999999999999887 655 777
No 455
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=90.92 E-value=0.13 Score=48.42 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+..+|+|+|.|.+|..+++.|...|..-+.+.|.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~ 72 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM 72 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEEC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5789999999999999999999999876778874
No 456
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.92 E-value=0.19 Score=45.78 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 91 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~ 91 (262)
.+++.+|+|+|.|.+|..+++.|...|..-+.+.|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3689999999999999999999999998777798853
No 457
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.92 E-value=0.9 Score=43.00 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCHHHHH-HHHHHHHCCCEEEEEeCC
Q psy14499 57 INSKISIQGFGNVGSV-AANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~-~a~~L~~~g~~vv~V~D~ 90 (262)
+.++|.|+|.|..|.+ +|++|.+.|++|. ++|.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~-~~D~ 54 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQIS-GSDL 54 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEE-EEEC
Confidence 4579999999999996 8999999999988 8885
No 458
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=90.90 E-value=0.36 Score=41.92 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=32.3
Q ss_pred hCCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 52 INLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 52 ~g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
|..+|+|+.++|.|. +.+|+++|+.|.+.|++|+ ++|
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv-~~~ 38 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPV-VFA 38 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEE
Confidence 346899999999997 6699999999999999998 555
No 459
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=90.89 E-value=0.5 Score=40.02 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~ 37 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVA-FSD 37 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578899999986 8899999999999999988 556
No 460
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=90.88 E-value=0.59 Score=39.68 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 43 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVA-IAD 43 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 8899999999999999988 555
No 461
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.88 E-value=0.48 Score=40.40 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~-~~~ 60 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVV-LTA 60 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999996 8899999999999999988 555
No 462
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=90.87 E-value=0.46 Score=40.74 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~-~~~ 51 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLV-LSG 51 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 7899999999999999988 555
No 463
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=90.87 E-value=0.51 Score=39.98 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~-~~~ 40 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVI-GTA 40 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 678999999996 7899999999999999998 555
No 464
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.85 E-value=0.62 Score=41.38 Aligned_cols=30 Identities=37% Similarity=0.463 Sum_probs=26.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHCCC-EEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKAGA-KIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~g~-~vv~V~D 89 (262)
++|+|+|.|.||..++..|...|. . +.+.|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~D 33 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGD-IVLLD 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEe
Confidence 589999999999999999999886 7 55778
No 465
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.84 E-value=0.21 Score=47.89 Aligned_cols=108 Identities=16% Similarity=0.163 Sum_probs=60.3
Q ss_pred HhCCCCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCCccCCCCceecCCCccc
Q psy14499 51 KINLNIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRSIKDFNEGEKINDSKEF 130 (262)
Q Consensus 51 ~~g~~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~~~~~~~~~~~~~~~~i 130 (262)
.++......+++|+|+|.+|+.+++.|.+.|..++ +.|.+ ++.+.+.. ..+.+ +++ ..+.
T Consensus 341 ~~~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~-vid~d----------~~~~~~~~---~~i~g--D~t----~~~~ 400 (565)
T 4gx0_A 341 LIGEAPEDELIFIIGHGRIGCAAAAFLDRKPVPFI-LIDRQ----------ESPVCNDH---VVVYG--DAT----VGQT 400 (565)
T ss_dssp ------CCCCEEEECCSHHHHHHHHHHHHTTCCEE-EEESS----------CCSSCCSS---CEEES--CSS----SSTH
T ss_pred HhcCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEE-EEECC----------hHHHhhcC---CEEEe--CCC----CHHH
Confidence 34443333899999999999999999999999998 66632 11110000 00000 111 1222
Q ss_pred c-c---cCceEEeeCCccCc---ccccchhccCc--eEEEecCCCCCCHHHHHHHHHCCCe
Q psy14499 131 W-S---IPCDILIPAAIEDQ---ITINNANNVTA--KIILEGANGPTTTEADDILRDKGII 182 (262)
Q Consensus 131 l-~---~~~DIlipaa~~~~---it~e~a~~~~~--kiIve~AN~p~t~ea~~~l~~rgi~ 182 (262)
| + .++|.+|-++..+. +..-.++++.. ++|+-. |.+- -.+.|++-|+.
T Consensus 401 L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iiar~-~~~~---~~~~l~~~G~d 457 (565)
T 4gx0_A 401 LRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVARA-NGEE---NVDQLYAAGAD 457 (565)
T ss_dssp HHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE-SSTT---SHHHHHHHTCS
T ss_pred HHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEEEE-CCHH---HHHHHHHcCCC
Confidence 2 1 48999999887643 33345666644 555555 4333 34556777764
No 466
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=90.82 E-value=0.62 Score=39.15 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~-~~~ 44 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVI-IAD 44 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999986 8999999999999999988 444
No 467
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=90.81 E-value=0.61 Score=39.38 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=30.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~-~~~ 38 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVA-IAA 38 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 578899999986 8899999999999999988 555
No 468
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.80 E-value=0.37 Score=41.80 Aligned_cols=36 Identities=19% Similarity=0.100 Sum_probs=27.2
Q ss_pred CCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 53 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 53 g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
..++++++++|.|. |.+|+++|+.|.+.|++|+ ++|
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 64 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVV-ITG 64 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 34789999999996 7899999999999999988 555
No 469
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.76 E-value=0.63 Score=39.52 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~ 40 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVY-TCS 40 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999995 8899999999999999988 445
No 470
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=90.75 E-value=0.62 Score=39.72 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=30.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 44 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLS-LVD 44 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999985 8899999999999999988 455
No 471
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.74 E-value=0.66 Score=39.12 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=29.8
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~-~~~ 36 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLV-ACD 36 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 467899999996 8899999999999999988 445
No 472
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.74 E-value=0.58 Score=40.94 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~-~~~ 62 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLV-LSD 62 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999996 7899999999999999988 555
No 473
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=90.70 E-value=0.68 Score=39.95 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~-~~~ 60 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVF-ICA 60 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999996 8899999999999999988 556
No 474
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.67 E-value=1.2 Score=39.39 Aligned_cols=120 Identities=18% Similarity=0.076 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHhcCC--ccCCCCceecCCCcccc-c
Q psy14499 56 IINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTFTRS--IKDFNEGEKINDSKEFW-S 132 (262)
Q Consensus 56 l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~~g~--~~~~~~~~~~~~~~~il-~ 132 (262)
..+.+|+|+|.|.||..+++++...|++++.++| .+.+++... ++.|. +-++.+....+...++- .
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~----------~~~~k~~~a-~~lGa~~~i~~~~~~~~~~~~~~~~~ 227 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID----------ISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLREL 227 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE----------SCHHHHHHH-HHTTCSEEEETTTSCHHHHHHHHGGG
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEe----------chHHHHHHH-HHcCCeEEEeCCCCCHHHHHHhhccc
Confidence 3788999999999999999999999998765667 355554333 33332 11111110000000011 1
Q ss_pred cCceEEeeCCccCcccccchhcc--CceEEEecCCC-C--CCHHHHHHHHHCCCeEecc
Q psy14499 133 IPCDILIPAAIEDQITINNANNV--TAKIILEGANG-P--TTTEADDILRDKGIILAPD 186 (262)
Q Consensus 133 ~~~DIlipaa~~~~it~e~a~~~--~~kiIve~AN~-p--~t~ea~~~l~~rgi~~iPD 186 (262)
...|++++|+.....-....+.+ ..+++.-|.-. + +.+..-..+..|++.+..-
T Consensus 228 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~ 286 (346)
T 4a2c_A 228 RFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGS 286 (346)
T ss_dssp CSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEEC
T ss_pred CCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEE
Confidence 35799999986332111212222 45555544332 2 2333233345566666543
No 475
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=90.66 E-value=0.5 Score=41.04 Aligned_cols=45 Identities=27% Similarity=0.361 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHH
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVT 110 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~ 110 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ ++| .+.+++.+..+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~-~~~----------r~~~~~~~~~~ 50 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVV-VTA----------RNGNALAELTD 50 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-ECC----------SCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEE----------CCHHHHHHHHH
Confidence 578999999996 7899999999999999987 666 35555555544
No 476
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=90.64 E-value=0.78 Score=41.49 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=65.9
Q ss_pred ecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCCceeeCCC
Q psy14499 21 TGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGFG--NVGSVAANLFFKAGAKIVAIQDDKTTIYNPN 98 (262)
Q Consensus 21 tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGfG--~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~ 98 (262)
++.|+-.||..+.-+--+..=+..+++. .| +++|++|+++|=| +|..+++..+..+|++++ ++- |.
T Consensus 134 ~~vPVINa~~~~~HPtQaLaDl~Ti~e~---~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~-~~~-------P~ 201 (325)
T 1vlv_A 134 SGVPVYNGLTDEFHPTQALADLMTIEEN---FG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFV-ACG-------PE 201 (325)
T ss_dssp HCSCEEESCCSSCCHHHHHHHHHHHHHH---HS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEE-EES-------CG
T ss_pred CCCCEEeCCCCCCCcHHHHHHHHHHHHH---hC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEE-EEC-------Cc
Confidence 4578888888644444444444444443 34 6899999999985 999999999999999987 544 44
Q ss_pred CCCHH-HHHHH----HHhcCCccCCCCceecCCCccccccCceEEeeCCc
Q psy14499 99 GFNIP-KLQKY----VTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI 143 (262)
Q Consensus 99 GlD~~-~l~~~----~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~ 143 (262)
|+.++ .+.+. .++.|. ..+..+++++.+ .++||+.--..
T Consensus 202 ~~~p~~~~~~~~~~~a~~~G~-----~v~~~~d~~eav-~~aDvvyt~~w 245 (325)
T 1vlv_A 202 ELKPRSDVFKRCQEIVKETDG-----SVSFTSNLEEAL-AGADVVYTDVW 245 (325)
T ss_dssp GGCCCHHHHHHHHHHHHHHCC-----EEEEESCHHHHH-TTCSEEEECCC
T ss_pred cccCCHHHHHHHHHHHHHcCC-----eEEEEcCHHHHH-ccCCEEEeccc
Confidence 54433 23322 223331 112223345555 48999887554
No 477
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=90.63 E-value=0.33 Score=41.68 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcC-----------------CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-----------------GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-----------------G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+++|++|+|.|- |.+|.++|+.|.+.|++|+-++.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 578999999998 79999999999999999985543
No 478
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=90.62 E-value=0.91 Score=40.83 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=66.1
Q ss_pred ecccCCCCccCCCCChhHHHHHHHHHHHHHHhCCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCC
Q psy14499 21 TGKPISIGGSFGRQKATGRGVFIIGSKIASKINLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNG 99 (262)
Q Consensus 21 tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~~g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~G 99 (262)
++.|+-.||..+.-+--+..=+..+++. .| +++|++|+++|= ++|..+++..+..+|++++ ++- |.|
T Consensus 122 ~~vPVINa~~~~~HPtQaLaDl~Ti~e~---~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~-~~~-------P~~ 189 (315)
T 1pvv_A 122 ATVPVINGLSDFSHPCQALADYMTIWEK---KG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVV-VAT-------PEG 189 (315)
T ss_dssp CSSCEEEEECSSCCHHHHHHHHHHHHHH---HS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEE-EEC-------CTT
T ss_pred CCCCEEcCCCCCCCcHHHHHHHHHHHHH---hC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEEE-EEC-------Ccc
Confidence 4578888887654444444444444443 34 689999999997 8999999999999999987 544 555
Q ss_pred CCHH-HHHHH----HHhcCCccCCCCceecCCCccccccCceEEeeCCc
Q psy14499 100 FNIP-KLQKY----VTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI 143 (262)
Q Consensus 100 lD~~-~l~~~----~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~ 143 (262)
+.++ .+.+. .++.|. ..+..+++++.+ .++||+.--..
T Consensus 190 ~~~~~~~~~~~~~~a~~~g~-----~~~~~~d~~eav-~~aDvvy~~~w 232 (315)
T 1pvv_A 190 YEPDEKVIKWAEQNAAESGG-----SFELLHDPVKAV-KDADVIYTDVW 232 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHTC-----EEEEESCHHHHT-TTCSEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHcCC-----eEEEEeCHHHHh-CCCCEEEEcce
Confidence 5443 23322 223331 112223345555 48999887554
No 479
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.62 E-value=0.35 Score=37.13 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCEEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA-GAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~-g~~vv~V~D 89 (262)
+.++++|+|.|..|+.+++.|.+. |++++|+.|
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d 36 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFID 36 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEE
Confidence 457999999999999999999875 899999988
No 480
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.61 E-value=0.78 Score=37.14 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=28.0
Q ss_pred CCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEE
Q psy14499 57 INSKISIQG-FGNVGSVAANLFFKAGAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqG-fG~VG~~~a~~L~~~g~~vv~V 87 (262)
.+.+|+|.| .|.+|+.+++++...|++|+++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~ 69 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTT 69 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEE
Confidence 688999999 6999999999999999998844
No 481
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=90.60 E-value=0.65 Score=39.84 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~-~~~ 52 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVV-VAS 52 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 4689999999996 8899999999999999988 445
No 482
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.55 E-value=0.64 Score=41.25 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=25.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCEEEEEeC
Q psy14499 59 SKISIQGFGNVGSVAANLFFKA--GAKIVAIQD 89 (262)
Q Consensus 59 ~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V~D 89 (262)
++|+|+|.|.+|..++..|.+. |..|+ +.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~-l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELV-LLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 4799999999999999999884 67776 667
No 483
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.55 E-value=0.77 Score=40.99 Aligned_cols=32 Identities=34% Similarity=0.394 Sum_probs=27.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCC--EEEEEeC
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKAGA--KIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~g~--~vv~V~D 89 (262)
+.++|+|+|.|.||..++-.|...+. .++ +.|
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~-L~D 39 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELV-LID 39 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEE-EEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEe
Confidence 34789999999999999999988886 666 778
No 484
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=90.55 E-value=0.65 Score=39.74 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHHH-HhCCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 36 ATGRGVFIIGSKIAS-KINLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 36 aTg~Gv~~~~~~~~~-~~g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
+|--|+--+.+++.- ....++++++++|.|. |.+|+++++.|.+.|++|+.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 6 HHSSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp ------------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 334444455555543 3356889999999996 88999999999999999985543
No 485
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=90.50 E-value=0.36 Score=50.04 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=32.9
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 91 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~ 91 (262)
.|+..+|+|+|.|.+|..+++.|...|..-+.+.|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCC
Confidence 3688999999999999999999999998777798853
No 486
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.46 E-value=0.71 Score=39.51 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=30.8
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~-~~~ 62 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLV-LWD 62 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEE-EEE
Confidence 4688999999985 8899999999999999988 445
No 487
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=90.41 E-value=0.49 Score=43.03 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=44.9
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCC--EEEEEeCCCceeeCCCCCCHHHHHHHHH--hcCCccCCCCce-ec-CCCc
Q psy14499 56 IINSKISIQGF-GNVGSVAANLFFKAGA--KIVAIQDDKTTIYNPNGFNIPKLQKYVT--FTRSIKDFNEGE-KI-NDSK 128 (262)
Q Consensus 56 l~~~~v~IqGf-G~VG~~~a~~L~~~g~--~vv~V~D~~G~i~~~~GlD~~~l~~~~~--~~g~~~~~~~~~-~~-~~~~ 128 (262)
+..++|+|+|. |.||+.+|..|...|. .++ +.| +|.+++..... +... |+... .. ++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiD----------i~~~k~~g~a~DL~~~~---~~~~~i~~t~d~~ 71 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYD----------PFAVGLEGVAEEIRHCG---FEGLNLTFTSDIK 71 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EEC----------SCHHHHHHHHHHHHHHC---CTTCCCEEESCHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEe----------CCchhHHHHHHhhhhCc---CCCCceEEcCCHH
Confidence 46789999997 9999999998888884 555 667 56654432111 1111 22211 11 1122
Q ss_pred cccccCceEEeeCCc
Q psy14499 129 EFWSIPCDILIPAAI 143 (262)
Q Consensus 129 ~il~~~~DIlipaa~ 143 (262)
+.+ .+|||+|-|+.
T Consensus 72 ~al-~dADvVvitaG 85 (343)
T 3fi9_A 72 EAL-TDAKYIVSSGG 85 (343)
T ss_dssp HHH-TTEEEEEECCC
T ss_pred HHh-CCCCEEEEccC
Confidence 233 58999998864
No 488
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.40 E-value=0.16 Score=47.26 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCC
Q psy14499 55 NIINSKISIQGFGNVGSVAANLFFKAGAKIVAIQDDK 91 (262)
Q Consensus 55 ~l~~~~v~IqGfG~VG~~~a~~L~~~g~~vv~V~D~~ 91 (262)
++++++|.|+|.|..|.++|++|.+.|++|+ ++|++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~-~~D~~ 37 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPR-VMDTR 37 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCE-EEESS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEE-EEECC
Confidence 3578999999999999999999999999988 78864
No 489
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.37 E-value=0.48 Score=40.32 Aligned_cols=35 Identities=29% Similarity=0.520 Sum_probs=31.0
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 43 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVV-VTD 43 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEE-EEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 4689999999996 7899999999999999988 556
No 490
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=90.36 E-value=0.6 Score=40.20 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~-~~~ 58 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTV-IAS 58 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEE-EEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 478999999996 6899999999999999988 555
No 491
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.33 E-value=0.39 Score=40.85 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=30.5
Q ss_pred CCCCCCeEEEEcC-CH--HHHHHHHHHHHCCCEEEEEeC
Q psy14499 54 LNIINSKISIQGF-GN--VGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 54 ~~l~~~~v~IqGf-G~--VG~~~a~~L~~~g~~vv~V~D 89 (262)
.++++++++|.|. |. +|+++|+.|.+.|++|+ +.+
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~-~~~ 40 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLI-FTY 40 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEE-EEE
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEE-Eec
Confidence 4688999999997 55 99999999999999988 444
No 492
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=90.26 E-value=0.65 Score=39.02 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=27.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 57 INSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 57 ~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
.+++++|.|. |.+|+++++.|.+.|++|+ ++|
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~-~~~ 34 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVS-MMG 34 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEE
Confidence 5688999996 7899999999999999988 555
No 493
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.22 E-value=1.1 Score=39.89 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHC--CCEEEEE
Q psy14499 57 INSKISIQGFGNVGSVAANLFFKA--GAKIVAI 87 (262)
Q Consensus 57 ~~~~v~IqGfG~VG~~~a~~L~~~--g~~vv~V 87 (262)
.|.+|+|+|.|.||..+++++... |++|+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~ 202 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGI 202 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 789999999999999999999998 9998744
No 494
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.21 E-value=0.61 Score=41.25 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=30.3
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv-~~~ 39 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVA-IAD 39 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEE-EEE
Confidence 578999999996 8899999999999999988 555
No 495
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=90.20 E-value=0.6 Score=39.58 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 45 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVV-VSS 45 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEE-EEe
Confidence 578999999986 8899999999999999988 445
No 496
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.18 E-value=0.61 Score=40.19 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=31.1
Q ss_pred CCCCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 53 NLNIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 53 g~~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
..++++++++|.|. |.+|+++|+.|.+.|++|+ +.|
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~-~~~ 59 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVI-GTA 59 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe
Confidence 34688999999986 7899999999999999988 555
No 497
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.17 E-value=0.73 Score=39.46 Aligned_cols=46 Identities=26% Similarity=0.368 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCCceeeCCCCCCHHHHHHHHHh
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDDKTTIYNPNGFNIPKLQKYVTF 111 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~~GlD~~~l~~~~~~ 111 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.| .+.+++.+..++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~-~~~----------r~~~~~~~~~~~ 49 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLV-AVD----------REERLLAEAVAA 49 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEE-EEE----------SCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEe----------CCHHHHHHHHHH
Confidence 478899999986 8899999999999999988 545 345555555443
No 498
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=90.13 E-value=0.41 Score=43.43 Aligned_cols=106 Identities=9% Similarity=-0.008 Sum_probs=65.2
Q ss_pred ecccCCCCccCCCCChhHHHHHHHHHHHHHH-hCCCCCCCeEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCCceeeCC
Q psy14499 21 TGKPISIGGSFGRQKATGRGVFIIGSKIASK-INLNIINSKISIQGFG--NVGSVAANLFFKAGAKIVAIQDDKTTIYNP 97 (262)
Q Consensus 21 tGkp~~~GG~~~~~~aTg~Gv~~~~~~~~~~-~g~~l~~~~v~IqGfG--~VG~~~a~~L~~~g~~vv~V~D~~G~i~~~ 97 (262)
++.|+-.||..+.-+--+..=+..++ ++ .|.+++|++|+++|=| +|..+++..+..+|+.+. ++- |
T Consensus 120 ~~vPVINa~~~~~HPtQ~LaDl~Ti~---e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~-~~~-------P 188 (333)
T 1duv_G 120 ASVPVWNGLTNEFHPTQLLADLLTMQ---EHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLR-LVA-------P 188 (333)
T ss_dssp HSSCEEESCCSSCCHHHHHHHHHHHH---HHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEE-EEC-------C
T ss_pred CCCCeEcCCCCCCCchHHHHHHHHHH---HHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEE-EEC-------C
Confidence 46788888864444333333333333 34 4657899999999986 999999999999999987 544 4
Q ss_pred CCCCHH-HHHH----HHHhcCCccCCCCceecCCCccccccCceEEeeCCc
Q psy14499 98 NGFNIP-KLQK----YVTFTRSIKDFNEGEKINDSKEFWSIPCDILIPAAI 143 (262)
Q Consensus 98 ~GlD~~-~l~~----~~~~~g~~~~~~~~~~~~~~~~il~~~~DIlipaa~ 143 (262)
.|+.++ .+.+ ..++.|. ..+..+++++.+ .++||+.--..
T Consensus 189 ~~~~p~~~~~~~~~~~a~~~G~-----~v~~~~d~~eav-~~aDvvytd~w 233 (333)
T 1duv_G 189 QACWPEAALVTECRALAQQNGG-----NITLTEDVAKGV-EGADFIYTDVW 233 (333)
T ss_dssp GGGCCCHHHHHHHHHHHHHTTC-----EEEEESCHHHHH-TTCSEEEECCS
T ss_pred cccCCCHHHHHHHHHHHHHcCC-----eEEEEECHHHHh-CCCCEEEeCCc
Confidence 444433 2332 2223331 112223344555 48898887544
No 499
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=90.10 E-value=0.37 Score=41.89 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQDD 90 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D~ 90 (262)
+|+|++++|.|. +.+|+++|+.|.+.|++|+ ++|+
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~-~~~r 43 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVL-TTAR 43 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEE-EEEC
Confidence 789999999996 5699999999999999998 5554
No 500
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=90.07 E-value=0.62 Score=39.55 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=29.6
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEeC
Q psy14499 55 NIINSKISIQGF-GNVGSVAANLFFKAGAKIVAIQD 89 (262)
Q Consensus 55 ~l~~~~v~IqGf-G~VG~~~a~~L~~~g~~vv~V~D 89 (262)
++++++++|.|. |.+|+++++.|.+.|++|+ +.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~ 36 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVY-ITG 36 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEE-EEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEE-EEe
Confidence 467899999985 8899999999999999988 555
Done!