BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy145
(203 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|452845614|gb|EME47547.1| hypothetical protein DOTSEDRAFT_59988 [Dothistroma septosporum
NZE10]
Length = 667
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
T EI A+GRI CDT +GKLNAAS++LE G + LK+ G FPG+IVA +GS
Sbjct: 253 TAEIVAVGRIACDTPNGKLNAASLVLETSRRMGAGMRVPLKMESLGFDFFPGKIVALKGS 312
Query: 125 NPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKG 167
N S F AT++ LP + +R ++ EM+ R++ G
Sbjct: 313 NVSGEFFAATEVLPMPLLPPAASR---TEDIEMHNDRLAGADG 352
>gi|156384823|ref|XP_001633332.1| predicted protein [Nematostella vectensis]
gi|156220400|gb|EDO41269.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSN 125
E+T +GRI CD GKLNA+SV+LEG + S GR + L L + A+FPGQ+VAARG N
Sbjct: 252 EVTVVGRICCDAV-GKLNASSVMLEGSQDQSQGRQVKLDLTKVQQFALFPGQVVAARGIN 310
Query: 126 PSRNQFIATKIYSDASLPLSETRPALDQNTE 156
+ ++ + ++Y LP +LD+N E
Sbjct: 311 STGSKLVVNQLYEGVKLPF---YASLDRNGE 338
>gi|346975446|gb|EGY18898.1| DNA polymerase subunit alpha B [Verticillium dahliae VdLs.17]
Length = 658
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
TT + A+GRI D+ +GKLNAAS++LE T GG+ + L + + G + FPGQIVA +G
Sbjct: 256 TTPVIAVGRIASDSPEGKLNAASIVLETSRRTGGGQRVPLNMGQRGFSFFPGQIVAVKGI 315
Query: 125 NPSRNQFIATKIYSDASLPLSETRPA 150
N S ++F+ + LP + + PA
Sbjct: 316 NSSGSEFLVEDVLDIPLLPNAASLPA 341
>gi|310794290|gb|EFQ29751.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 659
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
TTE+ A+GRI D +GKLNAAS++LE GG ++L + G + FPGQ+VA +G
Sbjct: 256 TTEVIAVGRIASDAPEGKLNAASLVLEMSRRVGGGLRVALNMRNKGYSFFPGQVVALKGI 315
Query: 125 NPSRNQFIATKIYSDASLPLSETRPAL 151
N S N+F ++ LP + + PA+
Sbjct: 316 NTSGNEFAVEEVLEVPLLPNAASTPAV 342
>gi|260822499|ref|XP_002606639.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
gi|229291983|gb|EEN62649.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
Length = 521
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
IT GR+ CD S G+LNA SVLLEG TS +++ L L E ++FPGQIVA G N
Sbjct: 256 ITVSGRVCCDMSTGRLNAHSVLLEGSRETSARKTVHLDLSEVSEYSLFPGQIVACDGLNT 315
Query: 127 SRNQFIATKIYSDASLPLSE 146
+ ++ + +K Y LP +E
Sbjct: 316 TGSKLVVSKFYQGVHLPFAE 335
>gi|342880849|gb|EGU81867.1| hypothetical protein FOXB_07662 [Fusarium oxysporum Fo5176]
Length = 655
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 16/124 (12%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
TTE+ A+GRI D+S+GKLNAAS++LE T G + LK+ + FPGQIVA RG
Sbjct: 249 TTEVVAVGRIASDSSEGKLNAASLVLETSRRTGMGLRVPLKVDNIRSWSFFPGQIVAFRG 308
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP---------------ALDQNTEMYKLRVSYEKGL 168
+N S N+F+ ++ LP + + P A+D+++E L + Y G
Sbjct: 309 TNASGNEFVVKEVLEVPLLPSAASLPSALEGHRERFRGGPDAMDEDSEPAPLNILYASGP 368
Query: 169 PLAD 172
AD
Sbjct: 369 YTAD 372
>gi|291222797|ref|XP_002731400.1| PREDICTED: MGC80532 protein-like [Saccoglossus kowalevskii]
Length = 601
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGSNPSR 128
TA GRI CD S+GKLN+ SV+LEG TS G+ +SL L ++FPGQIVA G+N +
Sbjct: 256 TAAGRICCD-SNGKLNSQSVILEGSSETSAGKHVSLLLNIKEYSLFPGQIVAVDGTNSTG 314
Query: 129 NQFIATKIYSDASLPLSETRPALDQNTEMYKL 160
++ + +K+Y LP ++ +Y L
Sbjct: 315 SKLVVSKLYPGLMLPFNQIEDKESSTGPLYTL 346
>gi|443709652|gb|ELU04244.1| hypothetical protein CAPTEDRAFT_95153, partial [Capitella teleta]
Length = 465
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 71 IGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRN 129
+GRI CD +GKLNA SV+LEG S G + + L + A+FPGQIVA RG+N S
Sbjct: 129 VGRICCDC-NGKLNAQSVILEGCRGVSAGCRVPVDLSQLPQYALFPGQIVAMRGTNSSGR 187
Query: 130 QFIATKIYSDASLPLSETRPALDQNTEMYKL 160
+F+A +++ +LPL + P ++ +K
Sbjct: 188 KFVAKELFQPTALPLPDHEPNMENGKVTHKF 218
>gi|302408437|ref|XP_003002053.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
gi|261358974|gb|EEY21402.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
Length = 593
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
T+ + A+GRI D+ +GKLNAAS++LE T GG+ + L + + G + FPGQIVA +G
Sbjct: 191 TSPVIAVGRIASDSPEGKLNAASIVLETSRRTGGGQRVPLNMGQRGFSFFPGQIVAVKGI 250
Query: 125 NPSRNQFIATKIYSDASLPLSETRPA 150
N S ++F+ + LP + + PA
Sbjct: 251 NSSGSEFLVEDVLDMPLLPNAASLPA 276
>gi|451851852|gb|EMD65150.1| hypothetical protein COCSADRAFT_141761 [Cochliobolus sativus
ND90Pr]
Length = 695
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ +EI A+GRI CDTS+GKLN AS++LEG GR + L + FPGQIVA
Sbjct: 259 YASPSEIIAVGRIACDTSEGKLNTASLVLEGSRRHGSGRRVPLNIEGLQSYNFFPGQIVA 318
Query: 121 ARGSNPSRNQFIATKIYSDASLPL 144
RG+N S + F+ +++ SLPL
Sbjct: 319 LRGTNASGDSFVVSEVL---SLPL 339
>gi|451995337|gb|EMD87805.1| hypothetical protein COCHEDRAFT_1227110 [Cochliobolus
heterostrophus C5]
Length = 695
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ +EI A+GRI CDTS+GKLN AS++LEG GR + L + FPGQIVA
Sbjct: 259 YASPSEIIAVGRIACDTSEGKLNTASLVLEGSRRHGSGRRVPLNVEGLQSYNFFPGQIVA 318
Query: 121 ARGSNPSRNQFIATKIYSDASLPL 144
RG+N S + F+ +++ SLPL
Sbjct: 319 LRGTNASGDSFVVSEVL---SLPL 339
>gi|405963161|gb|EKC28759.1| DNA polymerase alpha subunit B [Crassostrea gigas]
Length = 607
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
E+T +GRI CD S GK+NA SV+LEG TS GRS+ L L + ++FPGQIVA G+N
Sbjct: 252 EVTLVGRICCD-SLGKMNAKSVILEGSRDTSAGRSVPLDLSDLKQYSLFPGQIVAMDGTN 310
Query: 126 PSRNQFIATKIY 137
S +F+ K+Y
Sbjct: 311 TSGQKFVVKKLY 322
>gi|41107576|gb|AAH65460.1| Pola2 protein [Danio rerio]
Length = 600
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
IT +G++ CD S+GKLNA SVLLE + GGR + + L E ++FPGQ+V G NP
Sbjct: 251 ITVLGQVCCD-SNGKLNAQSVLLEAGQ-EQGGRQVPVDLSELKEFSLFPGQVVVMEGMNP 308
Query: 127 SRNQFIATKIYSDASLPL---SETRPALDQNTE 156
S + +ATK+Y LP SE + +D+ E
Sbjct: 309 SGEKLVATKLYEGIPLPFYCPSEVKQEMDEVCE 341
>gi|449301784|gb|EMC97793.1| hypothetical protein BAUCODRAFT_67553 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ +GRI CD GKLNAAS++LEG + G + LK G VFPG+IVA RG
Sbjct: 255 TAEVVTVGRIACDDPSGKLNAASIVLEGSRRMAAGLRVPLKFAAGVGYDVFPGKIVALRG 314
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA 150
+N S F ++ S LP + PA
Sbjct: 315 TNVSGEYFSVAEVLSMPRLPPPASSPA 341
>gi|453087977|gb|EMF16018.1| DNA polymerase alpha, subunit B [Mycosphaerella populorum SO2202]
Length = 665
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
T++I A+GRI CD GKLNA+S++LE G + LKL FPG+IVA RG+
Sbjct: 250 TSDIVAVGRIACDQPTGKLNASSIVLETSRRMGAGMRVPLKLDGVTFDFFPGKIVALRGT 309
Query: 125 NPSRNQFIATKIYSDASLPLSETRP 149
N S + F+ ++ LP + +RP
Sbjct: 310 NVSGHHFLVREVLPMPLLPPAASRP 334
>gi|41054613|ref|NP_955875.1| DNA polymerase alpha subunit B [Danio rerio]
gi|28279175|gb|AAH45928.1| Polymerase (DNA directed), alpha 2 [Danio rerio]
Length = 599
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
IT +G++ CD S+GKLNA SVLLE + GGR + + L E ++FPGQ+V G NP
Sbjct: 251 ITVLGQVCCD-SNGKLNAQSVLLEAGQ-EQGGRQVPVDLSELKEFSLFPGQVVVMEGMNP 308
Query: 127 SRNQFIATKIYSDASLPL--SETRPALDQNTE 156
S + +ATK+Y LP E + +D+ +E
Sbjct: 309 SGEKLVATKLYEGIPLPFYCPEVKQEMDEVSE 340
>gi|395544820|ref|XP_003774304.1| PREDICTED: DNA polymerase alpha subunit B, partial [Sarcophilus
harrisii]
Length = 634
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
IT +G+I CD S+GKLN+ SV+LEGD S G I + L E ++FPGQIV G+N
Sbjct: 289 ITLLGQIGCD-SNGKLNSKSVILEGDREHSLGVQIPVDLSELKEYSLFPGQIVVMEGTNT 347
Query: 127 SRNQFIATKIYSDASLPL---SETRPALDQN 154
+ +FIATK+Y A LP +E LDQ
Sbjct: 348 TGKKFIATKLYEGAPLPFYQPTEEDGGLDQR 378
>gi|299117538|emb|CBN75382.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 696
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
+T + P ++ A+GR+ C++++GK+N AS+LLEG S G+ L L E A
Sbjct: 258 LTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFA 317
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPA 150
+FPGQ+VA +G N S + +A I PL +RP+
Sbjct: 318 LFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPS 355
>gi|301762582|ref|XP_002916691.1| PREDICTED: DNA polymerase alpha subunit B-like [Ailuropoda
melanoleuca]
Length = 595
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L IT +G+I CDT +GKLN+ SV+LEGD S G I + L E +
Sbjct: 233 IEAFTPVLLPAQEPITLLGQIGCDT-NGKLNSKSVILEGDREHSSGAQIPVDLSELKEYS 291
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + +FIATK+Y LP
Sbjct: 292 LFPGQVVVMEGMNTTGRKFIATKLYEGVPLPF 323
>gi|281350633|gb|EFB26217.1| hypothetical protein PANDA_004805 [Ailuropoda melanoleuca]
Length = 569
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L IT +G+I CDT +GKLN+ SV+LEGD S G I + L E +
Sbjct: 207 IEAFTPVLLPAQEPITLLGQIGCDT-NGKLNSKSVILEGDREHSSGAQIPVDLSELKEYS 265
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + +FIATK+Y LP
Sbjct: 266 LFPGQVVVMEGMNTTGRKFIATKLYEGVPLPF 297
>gi|340905257|gb|EGS17625.1| DNA polymerase alpha-primase complex-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 718
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T+EI A+GRI CD+ +GKLN +SV+LE T G + L L +FPGQI+A RG
Sbjct: 305 TSEIVAVGRIACDSLEGKLNPSSVVLETSRRTGAGLRVPLGLSRLKSYQLFPGQIIACRG 364
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLR 161
N S +F A +I S LP + + P + Q + + +LR
Sbjct: 365 INSSGKEFTAHEILSLPLLPNAASSPDVLQ-SHISRLR 401
>gi|326436074|gb|EGD81644.1| hypothetical protein PTSG_02360 [Salpingoeca sp. ATCC 50818]
Length = 651
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVA 120
F + + +GR+ D ++G+LN+ SV+LEG S G+ + L L T + ++FPGQI+A
Sbjct: 281 FPSQSPVLVVGRVCVDAAEGRLNSRSVVLEGCLANSLGKRVPLDLSSTQLFSLFPGQIIA 340
Query: 121 ARGSNPSRNQFIATKIYSDASLPLSETRP 149
A G NP+ + F + IY A P +T+P
Sbjct: 341 AEGVNPTGDAFTPSLIYQGAPAPRKKTKP 369
>gi|402081810|gb|EJT76955.1| DNA polymerase subunit alpha B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 674
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGS 124
TEI +GR+ D ++GKLNAAS++LE GG + L L G +FPGQIVA RG+
Sbjct: 262 TEIICVGRVASDVTEGKLNAASLVLETSRRGGGGLRVPLNLQRLPGYQLFPGQIVAVRGT 321
Query: 125 NPSRNQFIATKIYSDASLP-LSETRPALDQNTEMYKLRVS 163
NPS +F ++ +P + TR AL ++ + +LR +
Sbjct: 322 NPSGKEFAVAEMLEMPLMPNAASTREALAEHHQ--RLRAA 359
>gi|358392300|gb|EHK41704.1| hypothetical protein TRIATDRAFT_134831 [Trichoderma atroviride IMI
206040]
Length = 654
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
TTE+ A+GRI D +GKLNAAS++LE G + LKL G FPGQIVA RG
Sbjct: 251 TTEVVAVGRIASDALEGKLNAASIVLETSRRMGRGLRVPLKLDGIRGWNFFPGQIVALRG 310
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP-ALDQNTEMYK 159
SN + ++FI +I LP + + P AL+ + E K
Sbjct: 311 SNITGDEFIVKEILDMPLLPSAASSPSALEAHREKLK 347
>gi|358388584|gb|EHK26177.1| hypothetical protein TRIVIDRAFT_73573 [Trichoderma virens Gv29-8]
Length = 649
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 8/101 (7%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV---AVFPGQIVAA 121
T+EI A+GRI D+ +GKLNAAS++LE G + LKL GV + FPGQIVA
Sbjct: 246 TSEIVAVGRIASDSLEGKLNAASIVLETSRRMGRGLRVPLKL--DGVQSWSFFPGQIVAL 303
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRP-ALDQNTEMYKLR 161
RGSN + ++FI +I LP + + P AL+ + E KLR
Sbjct: 304 RGSNITGDEFIVKEILDMPLLPSAASSPAALEAHRE--KLR 342
>gi|126338934|ref|XP_001379826.1| PREDICTED: DNA polymerase alpha subunit B [Monodelphis domestica]
Length = 878
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSIS 103
+G + I P L +T +G+I CD S+GKLN SV+LEGD S G I
Sbjct: 236 LGYELKELHQIEAFSPILVPAQEPVTVLGQIGCD-SNGKLNPKSVILEGDREHSLGVQIP 294
Query: 104 LKLPE-TGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+ L E ++FPGQ+V G+N + +FIATK+Y A LP
Sbjct: 295 VDLSELKEYSLFPGQVVVMDGTNSTGKRFIATKLYEGAPLPF 336
>gi|407923832|gb|EKG16895.1| DNA polymerase alpha/epsilon subunit B [Macrophomina phaseolina
MS6]
Length = 681
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARG 123
T++I A+GRI D+++G+LNAAS++LE T G + LK+ + FPGQIVA RG
Sbjct: 257 TSDIVAVGRIASDSAEGRLNAASLVLETSRRTGAGLRVPLKVENLPLYNFFPGQIVALRG 316
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA 150
SNP+ + F+ +I LP++ + P+
Sbjct: 317 SNPAGSFFMVKEILEMPLLPVAASTPS 343
>gi|380482927|emb|CCF40930.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 659
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGS 124
TTE+ A+GRI D +GKLNAAS++LE GG I L + G + FPGQ+VA +G
Sbjct: 256 TTEVIAVGRIASDAPEGKLNAASLVLEMSRRVGGGLRIPLNMRNKGYSFFPGQVVALKGI 315
Query: 125 NPSRNQF 131
N S N+F
Sbjct: 316 NTSGNEF 322
>gi|355712602|gb|AES04403.1| polymerase , alpha 2 [Mustela putorius furo]
Length = 594
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L IT +G+I CDT +GKLN+ SV+LEGD S G I + L E +
Sbjct: 233 IEAFAPVLVPAQEPITLLGQIGCDT-NGKLNSKSVILEGDREHSSGAQIPVDLSELKEYS 291
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + +FIATK+Y LP
Sbjct: 292 LFPGQVVIMEGINTTGRKFIATKLYEGLPLPF 323
>gi|348564960|ref|XP_003468272.1| PREDICTED: DNA polymerase alpha subunit B-like [Cavia porcellus]
Length = 598
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L IT +G+I CD S+GKLN+ SV+LEGD S G + + L E +
Sbjct: 237 IEAFTPLLVPAQEPITVLGQIGCD-SNGKLNSKSVILEGDREHSSGAQVPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +ATK+Y LP E
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYE 329
>gi|440466804|gb|ELQ36048.1| DNA polymerase subunit alpha B [Magnaporthe oryzae Y34]
gi|440480288|gb|ELQ60962.1| DNA polymerase subunit alpha B [Magnaporthe oryzae P131]
Length = 666
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T+EI +GRI DTS+G+LNAAS++LE + GG L L + G FPGQIVA RG
Sbjct: 260 TSEIICVGRIASDTSEGRLNAASLVLETSRRSGGGLRAPLNLQKLPGYQFFPGQIVALRG 319
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
+N S ++F +++ LP + + P
Sbjct: 320 TNASGHEFNVSEVLQIPLLPNAASTP 345
>gi|389641335|ref|XP_003718300.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
gi|351640853|gb|EHA48716.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
Length = 666
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T+EI +GRI DTS+G+LNAAS++LE + GG L L + G FPGQIVA RG
Sbjct: 260 TSEIICVGRIASDTSEGRLNAASLVLETSRRSGGGLRAPLNLQKLPGYQFFPGQIVALRG 319
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
+N S ++F +++ LP + + P
Sbjct: 320 TNASGHEFNVSEVLQIPLLPNAASTP 345
>gi|347828114|emb|CCD43811.1| similar to DNA polymerase alpha/primase associated subunit
[Botryotinia fuckeliana]
Length = 670
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI ++GRI CD+++GKLN +S++LE G I LK+ + +G FPGQIVA +G
Sbjct: 264 TNEIVSVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKVDKMSGFQFFPGQIVALKG 323
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA-LDQNTEMYK 159
N S F ++I L ++ + PA LD++ +
Sbjct: 324 INASGEHFTVSEILEPPLLGVAASTPAGLDEHVRRLR 360
>gi|164426754|ref|XP_961324.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
gi|157071464|gb|EAA32088.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
Length = 645
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
TTEI A+GR+ DTS+GKLNAAS++LE GG + L + + G FPGQIVA RG
Sbjct: 262 TTEIVAVGRVASDTSEGKLNAASLVLETSRKLGGGFRVPLNVSKLKGYQFFPGQIVALRG 321
Query: 124 SNPSRNQFIATKI 136
+N + +F ++
Sbjct: 322 TNTTGREFTVNEV 334
>gi|425772210|gb|EKV10621.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum Pd1]
gi|425777487|gb|EKV15659.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum PHI26]
Length = 657
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T GR + LK+ V FPGQIVA RG
Sbjct: 260 TSEIVAVGRIASDSLEGKLNPASLVLETSRRTGAGRRVPLKVDSVPSVNFFPGQIVALRG 319
Query: 124 SNPSRNQFIATKIYSDASLP 143
NPS F ++ LP
Sbjct: 320 INPSGEYFTVKEVLPIPLLP 339
>gi|336473167|gb|EGO61327.1| hypothetical protein NEUTE1DRAFT_77266 [Neurospora tetrasperma FGSC
2508]
gi|350293573|gb|EGZ74658.1| DNA polymerase alpha, subunit B [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
TTEI A+GR+ DTS+GKLNAAS++LE GG + L + + G FPGQIVA RG
Sbjct: 257 TTEIVAVGRVASDTSEGKLNAASLVLETSRKLGGGFRVPLNVSKLKGYQFFPGQIVALRG 316
Query: 124 SNPSRNQFIATKI 136
+N + +F ++
Sbjct: 317 TNTTGREFTVNEV 329
>gi|291414417|ref|XP_002723449.1| PREDICTED: DNA-directed DNA polymerase alpha 2 [Oryctolagus
cuniculus]
Length = 600
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFTPLLVPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G+N + + +ATK+Y LP E
Sbjct: 298 LFPGQVVVMEGTNITGRKLVATKLYEGVPLPFYE 331
>gi|154304222|ref|XP_001552516.1| hypothetical protein BC1G_08381 [Botryotinia fuckeliana B05.10]
Length = 726
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI ++GRI CD+++GKLN +S++LE G I LK+ + +G FPGQIVA +G
Sbjct: 264 TNEIVSVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKVDKMSGFQFFPGQIVALKG 323
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA-LDQN 154
N S F ++I L ++ + PA LD++
Sbjct: 324 INASGEHFTVSEILEPPLLGVAASTPAGLDEH 355
>gi|18376383|emb|CAD21272.1| related to POL12 (DNA-directed DNA polymerase alpha) [Neurospora
crassa]
Length = 667
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
TTEI A+GR+ DTS+GKLNAAS++LE GG + L + + G FPGQIVA RG
Sbjct: 257 TTEIVAVGRVASDTSEGKLNAASLVLETSRKLGGGFRVPLNVSKLKGYQFFPGQIVALRG 316
Query: 124 SNPSRNQFIATKI 136
+N + +F ++
Sbjct: 317 TNTTGREFTVNEV 329
>gi|46125287|ref|XP_387197.1| hypothetical protein FG07021.1 [Gibberella zeae PH-1]
Length = 655
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
TTE+ A+GRI D+ +GKLNAAS++LE T G + LK+ + FPGQIVA RG
Sbjct: 249 TTEVVAVGRIASDSPEGKLNAASLVLETSRRTGMGLRVPLKMDSVRSWSFFPGQIVAFRG 308
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP---------------ALDQNTEMYKLRVSYEKGL 168
+N S ++F+ +I LP + + A+D+++E L + Y G
Sbjct: 309 TNASGSEFVVKEILDMPILPSAASSASTLEVHREKFRGGPDAMDEDSEPAPLNILYASGP 368
Query: 169 PLAD 172
AD
Sbjct: 369 YTAD 372
>gi|390332265|ref|XP_003723454.1| PREDICTED: DNA polymerase alpha subunit B-like isoform 1
[Strongylocentrotus purpuratus]
Length = 604
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPS 127
T +GRI CD S+G+LNA SV++EG TS G+ +++ L E ++FPGQ+VA G N +
Sbjct: 258 TVVGRICCD-SNGRLNAQSVMMEGSVETSAGKQVAVSLAEVKEYSLFPGQVVAMDGVNSA 316
Query: 128 RNQFIATKIY 137
+F+A+KIY
Sbjct: 317 GVKFVASKIY 326
>gi|149575496|ref|XP_001519697.1| PREDICTED: DNA polymerase alpha subunit B, partial [Ornithorhynchus
anatinus]
Length = 439
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 53 DITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGV 111
+I P L +T +G+I CD S+GKLN SV+LEGD S G + L L E
Sbjct: 118 NIESFSPVLVPAQEPVTVLGQIGCD-SNGKLNPKSVILEGDREHSLGAQVPLDLSELQEY 176
Query: 112 AVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSET 147
++FPGQ+V G+N + + IATK+Y LP ++
Sbjct: 177 SLFPGQVVVMEGTNTTGKKLIATKLYQGVPLPFHQS 212
>gi|400600867|gb|EJP68535.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 681
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARG 123
TT+I A+GR+ D+ +G+LNAAS++LE T G + L++ +VFPGQIVA RG
Sbjct: 266 TTDIVAVGRVASDSPEGRLNAASLVLETSRRTGMGFRVPLRMDAIPAWSVFPGQIVALRG 325
Query: 124 SNPSRNQFIATKIYSDASLP-LSETRPALDQNTEMYKLR 161
SN + ++F+ ++ + LP + T AL + E ++R
Sbjct: 326 SNATGDEFVVKEVLAIPLLPNAASTGSALAAHEERMRVR 364
>gi|156059150|ref|XP_001595498.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980]
gi|154701374|gb|EDO01113.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 664
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI CD+++GKLN +S++LE G I LK+ + G FPGQIVA +G
Sbjct: 258 TNEIVAVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKIDKMRGFQFFPGQIVALKG 317
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA 150
N S F ++I L ++ + PA
Sbjct: 318 INASGEDFTVSEILEPPLLGVAASTPA 344
>gi|115803045|ref|XP_780208.2| PREDICTED: DNA polymerase alpha subunit B-like isoform 2
[Strongylocentrotus purpuratus]
Length = 604
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPS 127
T +GRI CD S+G+LNA SV++EG TS G+ +++ L E ++FPGQ+VA G N +
Sbjct: 258 TVVGRICCD-SNGRLNAQSVMMEGSVETSAGKQVAVSLAEVKEYSLFPGQVVAMDGVNSA 316
Query: 128 RNQFIATKIY 137
+F+A+KIY
Sbjct: 317 GVKFVASKIY 326
>gi|148222523|ref|NP_001086972.1| polymerase (DNA directed), alpha 2, accessory subunit [Xenopus
laevis]
gi|50414931|gb|AAH77841.1| MGC80532 protein [Xenopus laevis]
Length = 598
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+T +G+I CD S+GKLN+ SV+LEGD S G + + L E ++FPGQ+V G+N
Sbjct: 251 VTVLGQIGCD-SNGKLNSKSVILEGDREHSAGMQVPVDLSELKDYSLFPGQVVIMEGTNS 309
Query: 127 SRNQFIATKIYSDASLPLSE 146
+ +F+ TK+Y LP +
Sbjct: 310 TGRRFVPTKLYEGVPLPFHQ 329
>gi|89268970|emb|CAJ82570.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+T +G+I CD S+GKLN+ SV+LEGD S G + + L E ++FPGQ+V G+N
Sbjct: 250 VTVLGQIGCD-SNGKLNSKSVILEGDREHSAGMQVPVDLSELKEYSLFPGQVVIMEGTNS 308
Query: 127 SRNQFIATKIYSDASLPLSE 146
+ +F+ TK+Y LP +
Sbjct: 309 TGRRFVPTKLYEGVPLPFHQ 328
>gi|330931777|ref|XP_003303534.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
gi|311320427|gb|EFQ88380.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
Length = 694
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
EI A+GRI DTS+GKLN A+++LEG GR + L + + FPGQIVA RG+N
Sbjct: 264 EIIAVGRIASDTSEGKLNTATIVLEGSRRHGSGRRVPLNVEGLSSYDFFPGQIVALRGTN 323
Query: 126 PSRNQFIATKIYSDASLPL 144
S + F+ +++ SLPL
Sbjct: 324 ASGDSFVVSEVL---SLPL 339
>gi|255086299|ref|XP_002509116.1| DNA polymerase [Micromonas sp. RCC299]
gi|226524394|gb|ACO70374.1| DNA polymerase [Micromonas sp. RCC299]
Length = 658
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARGSN 125
++T +GR+VCD S+G+LN ASV LEGD S G + L+L + ++FPGQIV G+N
Sbjct: 266 DVTVVGRVVCD-SEGRLNEASVQLEGDMANSAGMRVRLELRDVPSFSLFPGQIVRVTGAN 324
Query: 126 PSRNQFIATKIYSDASLPL 144
PS + +A I + A P+
Sbjct: 325 PSGHCLVAKSIVAHAPPPM 343
>gi|52346026|ref|NP_001005060.1| DNA-directed DNA polymerase alpha 2 [Xenopus (Silurana) tropicalis]
gi|49903509|gb|AAH76954.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+T +G+I CD S+GKLN+ SV+LEGD S G + + L E ++FPGQ+V G+N
Sbjct: 250 VTVLGQIGCD-SNGKLNSKSVILEGDREHSAGMQVPVDLSELKEYSLFPGQVVIMEGTNS 308
Query: 127 SRNQFIATKIYSDASLPLSE 146
+ +F+ TK+Y LP +
Sbjct: 309 TGRRFVPTKLYEGVPLPFHQ 328
>gi|340517616|gb|EGR47860.1| hypothetical protein TRIREDRAFT_79187 [Trichoderma reesei QM6a]
Length = 664
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
TTE+ A+GRI D+ +GKLNAAS++LE T G + LKL + FPGQIVA RG
Sbjct: 261 TTEVVAVGRIASDSLEGKLNAASIVLETSRRTGRGLRVPLKLDAIQSWSFFPGQIVALRG 320
Query: 124 SNPSRNQFIATKI 136
SN + ++FI +I
Sbjct: 321 SNITGDEFIVKEI 333
>gi|403294139|ref|XP_003938060.1| PREDICTED: DNA polymerase alpha subunit B [Saimiri boliviensis
boliviensis]
Length = 662
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N S + +ATK+Y +LP
Sbjct: 296 LFPGQVVIMEGINTSGRKLVATKLYEGVALPF 327
>gi|189200140|ref|XP_001936407.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983506|gb|EDU48994.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 694
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
EI A+GRI DTS+GKLN A+++LEG GR + L + + FPGQIVA RG+N
Sbjct: 264 EIIAVGRIASDTSEGKLNTATIVLEGSRRYGSGRRVPLNVEGLSSYDFFPGQIVALRGTN 323
Query: 126 PSRNQFIATKIYSDASLPL 144
S + F+ +++ SLPL
Sbjct: 324 ASGDSFVVSEVL---SLPL 339
>gi|408397989|gb|EKJ77126.1| hypothetical protein FPSE_02770 [Fusarium pseudograminearum CS3096]
Length = 655
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
TTE+ A+GRI D+ +GKLNAAS++LE T G + LK+ + FPGQIVA RG
Sbjct: 249 TTEVVAVGRIASDSPEGKLNAASLVLETSRRTGMGLRVPLKMDSIRSWSFFPGQIVAFRG 308
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP---------------ALDQNTEMYKLRVSYEKGL 168
+N S ++F+ ++ LP + + A+D+++E L + Y G
Sbjct: 309 TNASGSEFVVKEVLDMPILPSAASSASTLEAHREKFRGGPDAMDEDSEPAPLNILYASGP 368
Query: 169 PLAD 172
AD
Sbjct: 369 YTAD 372
>gi|255954187|ref|XP_002567846.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589557|emb|CAP95703.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 657
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T GR + LK+ A FPGQIVA RG
Sbjct: 260 TSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGRRVPLKVDSVPSANFFPGQIVALRG 319
Query: 124 SNPSRNQFIATKIYSDASLP 143
NPS F ++ LP
Sbjct: 320 INPSGEYFTVKEVLPIPLLP 339
>gi|396477047|ref|XP_003840181.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
gi|312216752|emb|CBX96702.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
Length = 692
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
EI A+GRI DTS+GKLN ++V+LEG GR LK+ + FPGQIVA RG+N
Sbjct: 264 EIIAVGRIASDTSEGKLNPSTVVLEGSRRYGSGRRTPLKIEGLSSYNFFPGQIVALRGTN 323
Query: 126 PSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSY 164
S + F+ +++ +LPL P TE+ +R Y
Sbjct: 324 ASGDAFVVSEVI---ALPL--LNPPATTPTELDVIRSRY 357
>gi|336269555|ref|XP_003349538.1| hypothetical protein SMAC_03126 [Sordaria macrospora k-hell]
gi|380093387|emb|CCC09045.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 666
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
TTEI A+GRI D+S+GKLNAAS++LE GG + L + + G FPGQIVA RG
Sbjct: 256 TTEIVAVGRIASDSSEGKLNAASLVLETSRRMGGGFRVPLNVSKLRGYQFFPGQIVALRG 315
Query: 124 SNPSRNQFIATKI 136
+N + +F ++
Sbjct: 316 TNTTGREFTVNEV 328
>gi|355566320|gb|EHH22699.1| DNA polymerase alpha 70 kDa subunit [Macaca mulatta]
Length = 598
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G IS+ L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQISVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|171692981|ref|XP_001911415.1| hypothetical protein [Podospora anserina S mat+]
gi|170946439|emb|CAP73240.1| unnamed protein product [Podospora anserina S mat+]
Length = 593
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T+EI A+GRI D+S+GKLNAAS+LLE GG + L + G FPGQIVA +G
Sbjct: 240 TSEIVAVGRIASDSSEGKLNAASLLLETSRRMGGGLRVPLNVSRLRGYQFFPGQIVALKG 299
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
N + ++F +I LP + + P
Sbjct: 300 VNSNGHEFTVHQILDLPLLPNAASTP 325
>gi|351701969|gb|EHB04888.1| DNA polymerase alpha subunit B [Heterocephalus glaber]
Length = 598
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN+ SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVTLLGQIGCD-SNGKLNSKSVILEGDREHSSGAQIPVDLTELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|303284707|ref|XP_003061644.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456974|gb|EEH54274.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 417
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISL---KLPETGVAVFPGQIVAARG 123
++T +GR+VCD S+GKLN ASV+LEG TS G + L +LP ++FPGQIV +G
Sbjct: 33 DVTVVGRVVCD-SEGKLNEASVMLEGSVETSNGARVRLELRRLPR--FSLFPGQIVCVQG 89
Query: 124 SNPSRNQFIATKIYS 138
SNPS + +A ++ +
Sbjct: 90 SNPSGHCLVARRLIA 104
>gi|134081927|emb|CAK97193.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLNAAS++LE T G + LKL A FPGQIVA RG
Sbjct: 204 TSEIVAVGRIASDSMEGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRG 263
Query: 124 SNPSRNQFIATKIYSDASLP 143
N S N F ++ LP
Sbjct: 264 INASGNYFSVKEVLPTPLLP 283
>gi|429851305|gb|ELA26503.1| DNA polymerase alpha primase associated subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 724
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLP--ETGVAVFPGQIVAAR 122
TT + A+GRI D +GKLNA S++LE GG+ +SL + + G + FPGQIVA +
Sbjct: 321 TTAVIAVGRIASDAPEGKLNAPSLVLELSRRMGGGQRVSLNMRSVKKGFSFFPGQIVALK 380
Query: 123 GSNPSRNQFIATKIYSDASLPLSETRPA 150
G N S N+++ ++ LP + + PA
Sbjct: 381 GINTSGNEYLVEEVLEVPLLPNAASTPA 408
>gi|378726669|gb|EHY53128.1| DNA polymerase alpha subunit B [Exophiala dermatitidis NIH/UT8656]
Length = 662
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI DT +GKLN+AS++LE G + LK LP FPGQIVA
Sbjct: 265 TSEIVAVGRIASDTPEGKLNSASLVLEMSRRMGAGLRVPLKVDALP--SYQFFPGQIVAV 322
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRP 149
RG+N S F +I S LP+ + P
Sbjct: 323 RGTNASGLYFTVKEILSAPRLPMPSSTP 350
>gi|432091137|gb|ELK24349.1| DNA polymerase alpha subunit B [Myotis davidii]
Length = 622
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G + + L E +
Sbjct: 236 IEAFTPVLVPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGARVPVDLSELKEYS 294
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + Q +ATK+Y LP
Sbjct: 295 LFPGQVVVMEGINTTGRQLVATKLYEGVPLPF 326
>gi|350639647|gb|EHA28001.1| DNA polymerase [Aspergillus niger ATCC 1015]
Length = 650
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLNAAS++LE T G + LKL A FPGQIVA RG
Sbjct: 255 TSEIVAVGRIASDSMEGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRG 314
Query: 124 SNPSRNQFIATKIYSDASLP 143
N S N F ++ LP
Sbjct: 315 INASGNYFSVKEVLPTPLLP 334
>gi|317035177|ref|XP_001401243.2| DNA polymerase alpha/primase associated subunit [Aspergillus niger
CBS 513.88]
Length = 660
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLNAAS++LE T G + LKL A FPGQIVA RG
Sbjct: 265 TSEIVAVGRIASDSMEGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRG 324
Query: 124 SNPSRNQFIATKIYSDASLP 143
N S N F ++ LP
Sbjct: 325 INASGNYFSVKEVLPTPLLP 344
>gi|238499981|ref|XP_002381225.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
gi|220692978|gb|EED49324.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
Length = 651
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI D+ +GKLN AS++LE T G + LK LP V FPGQIVA
Sbjct: 254 TSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGMRVPLKVDTLP--SVNFFPGQIVAL 311
Query: 122 RGSNPSRNQFIATKIYSDASLP 143
RG N S N F ++ S LP
Sbjct: 312 RGINASGNYFSVKEVLSTPLLP 333
>gi|296218739|ref|XP_002755571.1| PREDICTED: DNA polymerase alpha subunit B [Callithrix jacchus]
Length = 598
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I + P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEVFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|346325339|gb|EGX94936.1| DNA polymerase alpha/primase associated subunit [Cordyceps
militaris CM01]
Length = 667
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARG 123
TTEI A+GR+ D ++G+LNAAS++LE T G + L L +VFPGQI+A RG
Sbjct: 263 TTEIVAVGRVASDAAEGRLNAASLVLETSRRTGMGFRVPLNLEALPAWSVFPGQILALRG 322
Query: 124 SNPSRNQFIATKIYSDASLP-LSETRPALDQNTEMYKLR------VSYEKGLPLADYLVN 176
SN + N+F+ ++ LP + T AL + E ++R V E+G P A L
Sbjct: 323 SNATGNEFVVQELLPLPLLPNAASTGEALAAHEERMRVRDPDAMTVDEEEGTPPAPPLTL 382
Query: 177 VF 178
F
Sbjct: 383 FF 384
>gi|320591675|gb|EFX04114.1| DNA polymerase alpha primase associated subunit [Grosmannia
clavigera kw1407]
Length = 690
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D++ GKLNAAS +LE GG + L L G FPGQIVA RG
Sbjct: 267 TAEIVAVGRIASDSASGKLNAASAVLETSRRRGGGLRVPLDLGRLKGFQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYSDASLP 143
+N S + F +++ LP
Sbjct: 327 TNSSGHAFAVSQVLELPLLP 346
>gi|355751972|gb|EHH56092.1| DNA polymerase alpha 70 kDa subunit [Macaca fascicularis]
Length = 598
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G IS+ L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQISVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ++ G N + + +ATK+Y LP
Sbjct: 296 LFPGQVLIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|296809716|ref|XP_002845196.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
gi|238842584|gb|EEQ32246.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
Length = 664
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T EI A+GRI D+ +GKLN AS++LE T G + LK LP + FPGQIVA
Sbjct: 266 TREIIAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDLLPH--INFFPGQIVAL 323
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRPA 150
RG N S F ++ + LPL + PA
Sbjct: 324 RGINASGEYFTVYEVLTIPRLPLPISLPA 352
>gi|391870358|gb|EIT79543.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Aspergillus oryzae 3.042]
Length = 651
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI D+ +GKLN AS++LE T G + LK LP V FPGQIVA
Sbjct: 254 TSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGVRVPLKVDTLP--SVNFFPGQIVAL 311
Query: 122 RGSNPSRNQFIATKIYSDASLP 143
RG N S N F ++ S LP
Sbjct: 312 RGINASGNYFSVKEVLSTPLLP 333
>gi|169779341|ref|XP_001824135.1| DNA polymerase alpha/primase associated subunit [Aspergillus oryzae
RIB40]
gi|83772874|dbj|BAE63002.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 651
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI D+ +GKLN AS++LE T G + LK LP V FPGQIVA
Sbjct: 254 TSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGVRVPLKVDTLP--SVNFFPGQIVAL 311
Query: 122 RGSNPSRNQFIATKIYSDASLP 143
RG N S N F ++ S LP
Sbjct: 312 RGINASGNYFSVKEVLSTPLLP 333
>gi|295670609|ref|XP_002795852.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284937|gb|EEH40503.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
Length = 634
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T EI A+GRI D+ +GKLN AS++LE G + LK LP V +PGQIVA
Sbjct: 236 TKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVDSLP--SVQFYPGQIVAL 293
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRPALDQN 154
RG N SR F ++ S LP + T P + Q
Sbjct: 294 RGINASREYFTVFEVLSVPLLPPAATVPEIIQK 326
>gi|410974408|ref|XP_003993639.1| PREDICTED: DNA polymerase alpha subunit B [Felis catus]
Length = 599
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+T +G+I CDT +GKLN+ SV+LEGD S G I + L E ++FPGQ+V G N
Sbjct: 251 VTLLGQIGCDT-NGKLNSKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVILEGINT 309
Query: 127 SRNQFIATKIYSDASLPLSETRPALDQNTE 156
+ + IATK+Y LP + P D++ E
Sbjct: 310 TGAKLIATKLYEGVPLPFYQP-PKEDEDFE 338
>gi|302911324|ref|XP_003050467.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731404|gb|EEU44754.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 656
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
TTE+ A+GRI D+++GKLNAAS++ E G + LK+ FPGQIVA RG
Sbjct: 250 TTEVVAVGRIASDSTEGKLNAASLVFEMSRRGGMGLRVPLKMDHVRSWCFFPGQIVALRG 309
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP-ALDQNTEMYK 159
+N S +F+ +I LP + + P AL+ + E +
Sbjct: 310 TNASGTEFVVKEILEIPLLPNAASLPSALEGHRERLR 346
>gi|194388416|dbj|BAG60176.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 29 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 87
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +ATK+Y LP +
Sbjct: 88 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQ 121
>gi|357628416|gb|EHJ77759.1| DNA-directed DNA polymerase alpha 2 [Danaus plexippus]
Length = 586
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGS 124
TE+ GRI CD +D +LN+ SV+L+G S +++ L L ++FPGQ+V RG
Sbjct: 242 TEVLVAGRIECD-ADARLNSKSVILQGTWEDSLSQTVPLDLDSVQQYSLFPGQVVVVRGI 300
Query: 125 NPSRNQFIATKIYSDASLPL 144
NP N+F+A +++ DA+ P+
Sbjct: 301 NPRGNKFVARELFCDAARPV 320
>gi|322696184|gb|EFY87980.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
acridum CQMa 102]
Length = 616
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARG 123
TTE+ A+GRI D+ +G+LN AS++LE T G + L++ + + FPGQIVA RG
Sbjct: 266 TTEVVAVGRIASDSMEGRLNTASLVLETSRRTGMGLRVPLRMDKIRAWSFFPGQIVALRG 325
Query: 124 SNPSRNQFIATKIYSDASLP-LSETRPALDQNTEMYK 159
N + N+F+ +I LP + T AL+ + ++
Sbjct: 326 HNATGNEFVVHEILEIPLLPNAASTASALEAHRAKFR 362
>gi|311247333|ref|XP_003122587.1| PREDICTED: DNA polymerase alpha subunit B [Sus scrofa]
Length = 597
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPVLVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +AT++Y LP +
Sbjct: 296 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQ 329
>gi|426369123|ref|XP_004051546.1| PREDICTED: DNA polymerase alpha subunit B [Gorilla gorilla gorilla]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|208967074|dbj|BAG73551.1| polymerase (DNA directed) alpha 2 [synthetic construct]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|397516918|ref|XP_003828668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B [Pan
paniscus]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|439601|gb|AAA16459.1| DNA polymerase alpha [Homo sapiens]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|388452542|ref|NP_001253937.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|383417163|gb|AFH31795.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|387541568|gb|AFJ71411.1| DNA polymerase alpha subunit B [Macaca mulatta]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|20127448|ref|NP_002680.2| DNA polymerase alpha subunit B [Homo sapiens]
gi|90110415|sp|Q14181.2|DPOA2_HUMAN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|12654999|gb|AAH01347.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|12804263|gb|AAH02990.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|48145591|emb|CAG33018.1| POLA2 [Homo sapiens]
gi|119594779|gb|EAW74373.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|123982416|gb|ABM82949.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
gi|123997079|gb|ABM86141.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|410251086|gb|JAA13510.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|402892875|ref|XP_003909632.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B
[Papio anubis]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|114638540|ref|XP_001169495.1| PREDICTED: DNA polymerase alpha subunit B isoform 4 [Pan
troglodytes]
gi|410212336|gb|JAA03387.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410294866|gb|JAA26033.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410337017|gb|JAA37455.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|395742479|ref|XP_002821574.2| PREDICTED: DNA polymerase alpha subunit B-like, partial [Pongo
abelii]
Length = 337
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 197 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 255
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 256 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 287
>gi|322703760|gb|EFY95364.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
anisopliae ARSEF 23]
Length = 595
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARG 123
TTE+ A+GRI D+ +G+LN AS++LE T G + L++ + + FPGQIVA RG
Sbjct: 249 TTEVVAVGRIASDSMEGRLNTASLVLETSRRTGMGLRVPLRMDKIRTWSFFPGQIVALRG 308
Query: 124 SNPSRNQFIATKIYSDASLP 143
N + N+F+ +I LP
Sbjct: 309 HNATGNEFVVHEILEIPLLP 328
>gi|121713938|ref|XP_001274580.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
gi|119402733|gb|EAW13154.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
Length = 668
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GR+ D+ +GKLN AS++LE T G + L L A FPGQIVA RG
Sbjct: 267 TSEIIAVGRVASDSLEGKLNTASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
N S N F ++ S LP + + P
Sbjct: 327 INASGNYFTVKEVLSPPLLPPAASSP 352
>gi|431910281|gb|ELK13354.1| DNA polymerase alpha subunit B [Pteropus alecto]
Length = 639
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G + + L E +
Sbjct: 277 IEAFAPVLVPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQVPVDLSELREYS 335
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL---SETRPALDQN 154
+FPGQ+V G N + + +ATK+Y LP +E +QN
Sbjct: 336 LFPGQVVIMEGMNTTGRKLVATKLYEGVPLPFYQPTEEEGDFEQN 380
>gi|60098645|emb|CAH65153.1| hypothetical protein RCJMB04_4g15 [Gallus gallus]
Length = 402
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+T +GRI CD S+GKLN S +LEGD S G I L+L E ++FPGQ+V G+N
Sbjct: 262 VTVLGRIGCD-SNGKLNPKSAVLEGDRERSAGAQIPLELSELQEFSLFPGQVVVVEGTNS 320
Query: 127 SRNQFIATKIYSDASLPL 144
+ + + +K+Y LP
Sbjct: 321 TGRRLVVSKLYEGVPLPF 338
>gi|344295886|ref|XP_003419641.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B-like
[Loxodonta africana]
Length = 597
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+T +G+I CD S+GKLN SV+LEGD S G I + L E ++FPGQ+V G N
Sbjct: 250 VTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINS 308
Query: 127 SRNQFIATKIYSDASLPLSE 146
+ + IATK+Y LP +
Sbjct: 309 TGRKLIATKLYEGMPLPFHQ 328
>gi|426252020|ref|XP_004019717.1| PREDICTED: DNA polymerase alpha subunit B [Ovis aries]
Length = 600
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFAPILVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDLEHSSGTQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVS 163
+FPGQ+V G N + + +AT++Y LP + D ++E + + V+
Sbjct: 298 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQPNEE-DGDSEQFMVLVA 347
>gi|440907401|gb|ELR57555.1| DNA polymerase alpha subunit B [Bos grunniens mutus]
Length = 604
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFAPILVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +AT++Y LP +
Sbjct: 298 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQ 331
>gi|75057604|sp|Q58D13.1|DPOA2_BOVIN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|61554916|gb|AAX46631.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Bos taurus]
Length = 604
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFAPILVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +AT++Y LP +
Sbjct: 298 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQ 331
>gi|440635697|gb|ELR05616.1| hypothetical protein GMDG_01806 [Geomyces destructans 20631-21]
Length = 669
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSN 125
EI AIGRI D++DGKLN AS++LE G + L+L FPGQIVA RG N
Sbjct: 265 EIVAIGRIASDSADGKLNTASLVLETSRRMGNGLRVPLRLGAVASFQFFPGQIVALRGIN 324
Query: 126 PSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLR 161
S +F +++ LP++ + P T + +LR
Sbjct: 325 ASGEEFTVSEVLEIPLLPVAASTPQ-GLETHIQRLR 359
>gi|358374849|dbj|GAA91438.1| DNA polymerase alpha/primase associated subunit [Aspergillus
kawachii IFO 4308]
Length = 642
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T G + LKL A FPGQIVA RG
Sbjct: 255 TSEIVAVGRIASDSMEGKLNTASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRG 314
Query: 124 SNPSRNQFIATKIYSDASLP 143
N S N F ++ LP
Sbjct: 315 INASGNYFSVKEVLPTPLLP 334
>gi|296471438|tpg|DAA13553.1| TPA: DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFAPILVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +AT++Y LP +
Sbjct: 298 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQ 331
>gi|255708460|ref|NP_001019713.2| DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 239 IEAFAPILVPAQEPVTLLGQIGCD-SNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYS 297
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + +AT++Y LP +
Sbjct: 298 LFPGQVVVMEGINTTGRKLVATRLYEGVPLPFHQ 331
>gi|169614421|ref|XP_001800627.1| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
gi|160707341|gb|EAT82686.2| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGS 124
+E+ A+GRI DTS+GKLN A+++LEG GR + L + FPGQIVA +G+
Sbjct: 263 SELIAVGRIASDTSEGKLNTAALVLEGSRRFGSGRRVPLNVDGLVSYNFFPGQIVALKGT 322
Query: 125 NPSRNQFIATKIYSDASLPLSETRP 149
N S + F+ +++ S L T+P
Sbjct: 323 NASGDAFVVSEVLSLPLLNQPATKP 347
>gi|327352151|gb|EGE81008.1| hypothetical protein BDDG_03949 [Ajellomyces dermatitidis ATCC
18188]
Length = 496
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE T G + LK+ V FPGQIVA RG
Sbjct: 96 TKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALRG 155
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 156 INASREYFTVFEVLS 170
>gi|212529860|ref|XP_002145087.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
gi|210074485|gb|EEA28572.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
Length = 654
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI D+ +GKLN AS++LE T G + LK LP V FPGQ+VA
Sbjct: 255 TSEIVAVGRIASDSLEGKLNVASLVLETSRRTGAGLRVPLKVDALP--SVQFFPGQVVAL 312
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRPA 150
RG N S F ++ S LP + + P+
Sbjct: 313 RGINASGEYFSVKEVLSLPLLPTAASSPS 341
>gi|73983698|ref|XP_533234.2| PREDICTED: DNA polymerase alpha subunit B [Canis lupus familiaris]
Length = 595
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CDT +GKLN+ SV+LEGD S G I + L E +
Sbjct: 233 IEAFTPVLVPAQEPVILLGQIGCDT-NGKLNSKSVILEGDREHSSGAQIPVDLSELKEYS 291
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 292 LFPGQVVIMEGINTTGRKLVATKLYEGLPLPF 323
>gi|321465942|gb|EFX76940.1| hypothetical protein DAPPUDRAFT_321802 [Daphnia pulex]
Length = 476
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 71 IGRIVCDTSDG-KLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
IGRI CD + G +LN AS+LLEG + S G+S+ L + + + FPGQ+VA GSNP+
Sbjct: 143 IGRICCDATSGSRLNTASLLLEGTRMISSGQSVPLDVSQLKEFSFFPGQVVAVEGSNPTG 202
Query: 129 NQFIATKIYSDASLPLSETRPALD 152
+ + T + + P+ +T +L+
Sbjct: 203 KKMVVTSVTTPPINPVFKTDVSLE 226
>gi|242762029|ref|XP_002340296.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
gi|218723492|gb|EED22909.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
Length = 650
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T+EI A+GRI D+ +GKLN AS++LE T G + LK LP V FPGQ+VA
Sbjct: 251 TSEIVAVGRIASDSLEGKLNVASLVLETSRRTGAGLRVPLKVDALP--SVQFFPGQVVAL 308
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRP 149
RG N S F ++ S LP + + P
Sbjct: 309 RGINASGEYFSVKEVLSLPLLPTAASSP 336
>gi|226295381|gb|EEH50801.1| DNA polymerase subunit alpha B [Paracoccidioides brasiliensis Pb18]
Length = 655
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE G + LK+ V +PGQIVA RG
Sbjct: 257 TKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVDSLPSVQFYPGQIVALRG 316
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPAL 151
N SR F ++ S LP + T P +
Sbjct: 317 INASREYFTVFEVLSVPLLPPAVTVPEI 344
>gi|225677496|gb|EEH15780.1| DNA polymerase alpha 70 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 665
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE G + LK+ V +PGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVDSLPSVQFYPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPAL 151
N SR F ++ S LP + T P +
Sbjct: 327 INASREYFTVFEVLSVPLLPPAVTVPEI 354
>gi|255708463|ref|NP_001157529.1| DNA polymerase alpha subunit B isoform 2 [Mus musculus]
gi|26352896|dbj|BAC40078.1| unnamed protein product [Mus musculus]
Length = 566
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 327
>gi|258567182|ref|XP_002584335.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905781|gb|EEP80182.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 583
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAA 121
T EI A+GRI D+S+G+LN AS++LE T G + LK LP V FPGQIVA
Sbjct: 226 TREIIAVGRIASDSSEGRLNTASLVLEMSRRTGAGLRVPLKVDSLP--SVQFFPGQIVAI 283
Query: 122 RGSNPSRNQFIATKIYSDASLP 143
+G N S F A ++ S LP
Sbjct: 284 KGINASGEYFSAIEVLSTPLLP 305
>gi|261189697|ref|XP_002621259.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
gi|239591495|gb|EEQ74076.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
Length = 667
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE T G + LK+ V FPGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 327 INASREYFTVFEVLS 341
>gi|149725407|ref|XP_001492574.1| PREDICTED: DNA polymerase alpha subunit B [Equus caballus]
Length = 598
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD S G I + L E +
Sbjct: 237 IEAFTPVLAPAQEPVILLGQIGCD-SNGKLNSKSVILEGDREHSSGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + +ATK+Y LP
Sbjct: 296 LFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 327
>gi|239612976|gb|EEQ89963.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis ER-3]
Length = 667
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE T G + LK+ V FPGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 327 INASREYFTVFEVLS 341
>gi|148701242|gb|EDL33189.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Mus musculus]
Length = 608
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 279 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 337
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 338 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 369
>gi|116198853|ref|XP_001225238.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
gi|88178861|gb|EAQ86329.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
Length = 657
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLNAAS++LE G + L L + G FPGQIVA RG
Sbjct: 248 TAEIVAVGRIASDSPEGKLNAASLVLESSRRLGNGLRVPLNLSKLQGYQFFPGQIVALRG 307
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
N S F ++ LP + + P
Sbjct: 308 INTSGRDFTVHQVLDIPLLPNAASDP 333
>gi|354505058|ref|XP_003514589.1| PREDICTED: DNA polymerase alpha subunit B-like [Cricetulus griseus]
gi|344258643|gb|EGW14747.1| DNA polymerase alpha subunit B [Cricetulus griseus]
Length = 600
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD S G I + L + +
Sbjct: 237 IEAFTPLLEPAQEPVILLGQIGCD-SNGKLNSKSVILEGDREHSSGTQIPVDLSDLKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + +F ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRFTATKLYEGVPLPF 327
>gi|154283103|ref|XP_001542347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410527|gb|EDN05915.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 626
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + G I LK+ V FPGQIVA RG
Sbjct: 226 TKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALRG 285
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 286 INASREYFTVFEVLS 300
>gi|303659|dbj|BAA02746.1| DNA polymerase alpha associated subunit [Mus musculus]
Length = 600
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + ATK+Y LP +
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPFYQ 329
>gi|74139710|dbj|BAE31706.1| unnamed protein product [Mus musculus]
Length = 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 197 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 255
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 256 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 287
>gi|31982107|ref|NP_032919.2| DNA polymerase alpha subunit B isoform 1 [Mus musculus]
gi|341940457|sp|P33611.2|DPOA2_MOUSE RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|18204750|gb|AAH21424.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|40352968|gb|AAH64795.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|74211927|dbj|BAE29306.1| unnamed protein product [Mus musculus]
gi|148701243|gb|EDL33190.1| polymerase (DNA directed), alpha 2, isoform CRA_c [Mus musculus]
Length = 600
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + ATK+Y LP +
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPFYQ 329
>gi|23271843|gb|AAH23688.1| Pola2 protein [Mus musculus]
Length = 454
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 327
>gi|296420101|ref|XP_002839619.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635802|emb|CAZ83810.1| unnamed protein product [Tuber melanosporum]
Length = 652
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARGS 124
+EI A+GRI CDT DGKL+ +SVLLE G + LKL + FPGQI A RG
Sbjct: 271 SEIIAVGRISCDTLDGKLSPSSVLLEASRKMGAGSRVRLKLDAVLSYSFFPGQIAAVRGV 330
Query: 125 NPSRNQFIATKIYSDASLPLSETRP 149
N S +I LP + P
Sbjct: 331 NASGEYLAVREILDIPRLPPPTSSP 355
>gi|325091120|gb|EGC44430.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus H88]
Length = 667
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + G I LK+ V FPGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 327 INASREYFTVFEVLS 341
>gi|213405225|ref|XP_002173384.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
gi|212001431|gb|EEB07091.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
Query: 63 GDTTEITAI--GRIVCDTS--DGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQ 117
G+ T+ T I GRIV D+S G+LNA S+LLE G + L+L +G ++FPG+
Sbjct: 199 GELTQDTVIVVGRIVLDSSAPGGRLNAQSILLETSRRLGAGCRVPLRLDNLSGFSIFPGK 258
Query: 118 IVAARGSNPSRNQFIATKIYSDASLPL--SETRP--------ALDQNTEM 157
+VA +GSNPS F A++ LPL S+ +P A+ QNT +
Sbjct: 259 VVALKGSNPSGKVFTASEFVKIPPLPLATSDAQPTSDDMAVDAMSQNTRV 308
>gi|225561681|gb|EEH09961.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus G186AR]
Length = 667
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + G I LK+ V FPGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 327 INASREYFTVFEVLS 341
>gi|240275285|gb|EER38799.1| DNA polymerase alpha [Ajellomyces capsulatus H143]
Length = 633
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + G I LK+ V FPGQIVA RG
Sbjct: 267 TKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALRG 326
Query: 124 SNPSRNQFIATKIYS 138
N SR F ++ S
Sbjct: 327 INASREYFTVFEVLS 341
>gi|213514402|ref|NP_001133624.1| DNA polymerase subunit alpha B [Salmo salar]
gi|209154730|gb|ACI33597.1| DNA polymerase subunit alpha B [Salmo salar]
Length = 608
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+T +G++ CD S+GKLN+ SVLLE GGR + + L E ++FPGQ+V G N
Sbjct: 255 VTVLGQVCCD-SNGKLNSQSVLLEAGP-DQGGRQVPVDLSELRDYSLFPGQVVVMEGMNT 312
Query: 127 SRNQFIATKIYSDASLPLSET 147
S +F+A+K++ LP T
Sbjct: 313 SGRKFVASKLFEGVPLPFYST 333
>gi|196006784|ref|XP_002113258.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
gi|190583662|gb|EDV23732.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
Length = 595
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSIS-LKLPE-TGVAVFPGQIVAARGSNP 126
T IGRI CD S+G+LNAAS+++ G RS + L + E + + FPGQ+V G NP
Sbjct: 244 TVIGRIGCD-SNGRLNAASLVIAGYNPNRVCRSATPLNVKELSHFSFFPGQVVVLDGKNP 302
Query: 127 SRNQFIATKIYSDASLPLSE 146
S N FIA+K+Y +LP ++
Sbjct: 303 SGNAFIASKLYQGIALPFNK 322
>gi|398407609|ref|XP_003855270.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
gi|339475154|gb|EGP90246.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
Length = 672
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKL-PETGVAVFPGQIVAARG 123
T EI A+GRI CD +GKLNA+S++LE G + L++ P FPG+IVA RG
Sbjct: 250 TAEIVAVGRIACDVPNGKLNASSLVLETSRRMGAGMRVPLQMDPSLTYDFFPGKIVALRG 309
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPA 150
+N F T++ LP + + P+
Sbjct: 310 TNVGGEFFRPTEVLPIPLLPPAASLPS 336
>gi|307110154|gb|EFN58390.1| hypothetical protein CHLNCDRAFT_10114, partial [Chlorella
variabilis]
Length = 311
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 71 IGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAARGSNPSRN 129
+GR+ CDT G+LNA S+LLEG + TS G L + +FPGQ+VA G+NPS +
Sbjct: 1 VGRVCCDTEGGRLNAQSLLLEGSQKTSQGARARLDVSHCPTNRLFPGQVVAMLGTNPSGH 60
Query: 130 QFIATKIYSDAS 141
+A+++ A+
Sbjct: 61 CIVASQLLPGAA 72
>gi|3676244|emb|CAA09721.1| DNA polymerase alpha subunit II [Rattus norvegicus]
Length = 495
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L + +G+I CD S+GKLN+ SV+LEGD S G I + + E +
Sbjct: 132 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDREHSSGAQIPVDVSELKDYS 190
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FPGQ+V G N + + ATK+Y LP +
Sbjct: 191 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPFYQ 224
>gi|428184561|gb|EKX53416.1| DNA polymerase alpha subunit B, partial [Guillardia theta CCMP2712]
Length = 731
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 71 IGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSRN 129
GRI + G +NA SV +EG GR + L L +G AVFPGQIV G+N N
Sbjct: 281 CGRICVEGDSGLINATSVFIEG----VNGRRVKLDLSRSGEFAVFPGQIVVIHGTNADGN 336
Query: 130 QFIATKIYSDASLPLSET 147
+A I+SDAS+PL +T
Sbjct: 337 CIVAHSIHSDASVPLMKT 354
>gi|406866827|gb|EKD19866.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 668
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ GKLNA+S++LE G I L + +G FPGQIVA +G
Sbjct: 261 TNEVVAVGRIASDSLSGKLNASSLVLETSRRMGAGLRIPLNVTSLSGFKFFPGQIVAMKG 320
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLR 161
N S + F ++ LP + + PAL + + + +LR
Sbjct: 321 INASGDNFAVREVLEAPLLPGAASPPALLE-SHIQRLR 357
>gi|367037905|ref|XP_003649333.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
gi|346996594|gb|AEO62997.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
Length = 515
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLNAAS++LE G + L L + FPGQIVA +G
Sbjct: 96 TAEIVAVGRIASDSLEGKLNAASLVLESSRRMGNGLRVPLNLSKLKAYQFFPGQIVALKG 155
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLR 161
N S +F ++ LP + + P+ D + +LR
Sbjct: 156 INSSGREFTVHEVLDIPLLPNAASAPS-DLAAHLSRLR 192
>gi|255715665|ref|XP_002554114.1| KLTH0E14608p [Lachancea thermotolerans]
gi|238935496|emb|CAR23677.1| KLTH0E14608p [Lachancea thermotolerans CBS 6340]
Length = 653
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 66 TEITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAAR 122
+EITA+GRIV D+ +DG LN S+ LE +T GR I L L T V++FPGQIV R
Sbjct: 253 SEITAVGRIVPDSPAADGMLNTESLALETSRLTGIGRRIPLNLERTKEVSLFPGQIVGVR 312
Query: 123 GSNPSRNQFI 132
G N S + F+
Sbjct: 313 GKNASGDYFV 322
>gi|255547882|ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase, putative [Ricinus communis]
Length = 621
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+ A+G I CD +G+LN SVLL+ SGG+ + L L + ++FPGQIVA G NP
Sbjct: 251 VFAVGMICCD-GEGRLNEKSVLLQSSIEHSGGQRVHLDLHNLSQFSIFPGQIVAIEGHNP 309
Query: 127 SRNQFIATKIYS--------DASLPLSETRPALDQNTE 156
S + +A+K+ D +LP ++ + ALDQ E
Sbjct: 310 SGHCLVASKLVDSIPLSAAPDGNLPPAKKQ-ALDQEIE 346
>gi|357160336|ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 1 MSDRMSNQMKSVLDKIRPEWESNPQPSAYRIPWISNLSQFNAIIGLGTVTIGDITLLVPF 60
M DRM ++ + D+IR S+ S F+A G D TL
Sbjct: 216 MYDRMEDRFNYLEDRIR-----------------SSASLFSATGLCGEP--ADATL---- 252
Query: 61 LFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIV 119
+ A+G ++CD +G+LN S+LL+G S G+ + L L + ++FPGQ+V
Sbjct: 253 --ASEDNMFAVGMVICD-GEGRLNEKSILLQGSVEHSRGQRVRLDLKDINEFSLFPGQVV 309
Query: 120 AARGSNPSRNQFIATKIYSDASLPLSETRPA 150
G NPS + F+A+K+ +P+ + P
Sbjct: 310 GIEGHNPSGHCFVASKLIDSIPVPVDDQLPC 340
>gi|348514227|ref|XP_003444642.1| PREDICTED: DNA polymerase alpha subunit B isoform 1 [Oreochromis
niloticus]
Length = 602
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLE-GDEVTSGGRSI 102
+G G T I P IT +G+I CD S+GKLNA SVLLE G E GG+ +
Sbjct: 231 LGEGLRTHFSIEEFSPVSLPAQDSITVLGQICCD-SNGKLNAQSVLLEAGPE--QGGQQV 287
Query: 103 SLKLPE-TGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTE 156
+ L E ++FPGQ+V G N + + +A+K Y LP + ++ + E
Sbjct: 288 PVDLSELKEYSLFPGQVVVMEGMNTTGRKLVASKFYEAVPLPFYSSNMKMETDEE 342
>gi|449663068|ref|XP_002165302.2| PREDICTED: DNA polymerase alpha subunit B-like [Hydra
magnipapillata]
Length = 605
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 64 DTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAAR 122
D IT GRI CD S G+LN+ S++LEG S G+ + + L E ++FPGQIVA
Sbjct: 254 DVLHIT--GRICCD-SVGRLNSKSIVLEGSREFSTGKRMPIDLSEAKNYSLFPGQIVAMS 310
Query: 123 GSNPSRNQFIATKIYSDASLPL 144
G N S ++F+ + IY+ LP
Sbjct: 311 GKNISGSKFLPSTIYTGCRLPF 332
>gi|67514566|ref|NP_445932.2| DNA polymerase alpha subunit B [Rattus norvegicus]
gi|66910546|gb|AAH97300.1| Polymerase (DNA directed), alpha 2 [Rattus norvegicus]
Length = 600
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L + +G+I CD S+G+LN+ SV+LEGD S G I + + E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 327
>gi|363745960|ref|XP_003643474.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Gallus
gallus]
Length = 203
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+T +GRI CD S+GKLN S +LEGD S G I L+L E ++FPGQ+V G+N
Sbjct: 133 VTVLGRIGCD-SNGKLNPKSAVLEGDRERSAGAQIPLELSELQEFSLFPGQVVVVEGTNS 191
Query: 127 SRNQFIATKIY 137
+ + + +K+Y
Sbjct: 192 TGRRLVVSKLY 202
>gi|149062123|gb|EDM12546.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Rattus
norvegicus]
Length = 600
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L + +G+I CD S+G+LN+ SV+LEGD S G I + + E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 327
>gi|348514229|ref|XP_003444643.1| PREDICTED: DNA polymerase alpha subunit B isoform 2 [Oreochromis
niloticus]
Length = 621
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLE-GDEVTSGGRSI 102
+G G T I P IT +G+I CD S+GKLNA SVLLE G E GG+ +
Sbjct: 231 LGEGLRTHFSIEEFSPVSLPAQDSITVLGQICCD-SNGKLNAQSVLLEAGPE--QGGQQV 287
Query: 103 SLKLPE-TGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+ L E ++FPGQ+V G N + + +A+K Y LP
Sbjct: 288 PVDLSELKEYSLFPGQVVVMEGMNTTGRKLVASKFYEAVPLPF 330
>gi|432877683|ref|XP_004073218.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryzias latipes]
Length = 603
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLE-GDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSN 125
IT G+I CD S+GKLNA SVLLE G E GG+ +++ L E ++FPGQ+V G N
Sbjct: 254 ITVSGQICCD-SNGKLNAQSVLLEAGPE--HGGQQVAVDLSELKEYSLFPGQVVVMEGMN 310
Query: 126 PSRNQFIATKIYSDASLPL 144
+ + +A+KIY LP
Sbjct: 311 TTGKKLVASKIYEGVPLPF 329
>gi|52788200|sp|O89043.2|DPOA2_RAT RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit; AltName: Full=DNA
polymerase subunit II
gi|5912572|emb|CAB56208.1| DNA polymerase alpha [Rattus norvegicus]
Length = 600
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L + +G+I CD S+G+LN+ SV+LEGD S G I + + E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGRLNSKSVILEGDREHSSGAQIPVDVSELKDYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y LP
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEGVPLPF 327
>gi|115387293|ref|XP_001211152.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195236|gb|EAU36936.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 660
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAARG 123
EI A+GRI D+ +GKLN AS++LE T G + LK LP V +FPGQIVA RG
Sbjct: 265 EIVAVGRIASDSLEGKLNTASLVLETSRRTGAGIRVPLKVDSLP--SVNLFPGQIVALRG 322
Query: 124 SNPSRNQFIATKIYSDASLP 143
N S N F + LP
Sbjct: 323 INASGNYFSVKDVLPTPLLP 342
>gi|395852330|ref|XP_003798692.1| PREDICTED: DNA polymerase alpha subunit B [Otolemur garnettii]
Length = 598
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+ +G+I CD S+GKLN S++LEGD S G I + L E ++FPGQ+V G N
Sbjct: 251 VALLGQIGCD-SNGKLNNKSMILEGDREHSSGVQIPVDLSELKEYSLFPGQVVIMEGINT 309
Query: 127 SRNQFIATKIYSDASLPL 144
+ + IATK+Y LP
Sbjct: 310 TGRKLIATKLYEGVPLPF 327
>gi|410913631|ref|XP_003970292.1| PREDICTED: DNA polymerase alpha subunit B-like [Takifugu rubripes]
Length = 598
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 19 EWESNPQPSAY-----RIPWISN-LSQFNAIIGLGTVTIGDITLLVPFLFGDTTEITAIG 72
E E +P S+Y R+ + N L++ ++G + +I P IT +G
Sbjct: 197 EGEEDPLHSSYKYMFQRLRDVRNVLTEKIEVLGERLRSHFNIEEFSPVSLPAQDSITVLG 256
Query: 73 RIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSRNQF 131
+I CD S+GKLNA SVLLE GG+ + + L E ++FPGQ+V G N + +
Sbjct: 257 QICCD-SNGKLNAQSVLLEAGP-DQGGQQVPVNLSELKEYSLFPGQVVVMEGMNTTGRKL 314
Query: 132 IATKIYSDASLPL 144
A+K+Y LP
Sbjct: 315 TASKLYEGVPLPF 327
>gi|367025023|ref|XP_003661796.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
gi|347009064|gb|AEO56551.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
Length = 658
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLNAAS++LE G + L L + FPGQIVA RG
Sbjct: 249 TAEIIAVGRIASDSLEGKLNAASLVLETSRRMGNGLRVPLNLGKLKAYQFFPGQIVALRG 308
Query: 124 SNPSRNQFIATKIYSDASLPLSETRP 149
N S +F ++ LP + + P
Sbjct: 309 INSSGREFTVHEVLEIPLLPSAASPP 334
>gi|119174579|ref|XP_001239649.1| hypothetical protein CIMG_09270 [Coccidioides immitis RS]
gi|392869843|gb|EAS28372.2| DNA polymerase alpha/primase associated subunit [Coccidioides
immitis RS]
Length = 657
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +G+LN AS++ E T G + LK+ V +FPGQIVA +G
Sbjct: 260 TREVIAVGRIASDSMEGRLNTASLVFEMSRRTGAGLRVPLKVDSLPSVQLFPGQIVAIKG 319
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPAL 151
N S F A ++ LP + + P +
Sbjct: 320 INASGEYFSALEVLQPPFLPPAASSPEI 347
>gi|70997197|ref|XP_753352.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
gi|66850988|gb|EAL91314.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
Length = 617
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T G + L L A FPGQIVA RG
Sbjct: 201 TSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQIVALRG 260
Query: 124 SNPSRNQFIATKI 136
N S N F ++
Sbjct: 261 INASGNYFSVKEV 273
>gi|159126923|gb|EDP52039.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus A1163]
Length = 617
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T G + L L A FPGQIVA RG
Sbjct: 201 TSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQIVALRG 260
Query: 124 SNPSRNQFIATKI 136
N S N F ++
Sbjct: 261 INASGNYFSVKEV 273
>gi|444315936|ref|XP_004178625.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
gi|387511665|emb|CCH59106.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
Length = 673
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 62 FGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAV 113
FGD T EI A+GRIV D T++G LN S+ LE ++ GR ISL L E ++
Sbjct: 261 FGDPTIQSQSEIYAVGRIVPDSPTTEGFLNPESLALETSRISGIGRRISLNLTEVNDFSL 320
Query: 114 FPGQIVAARGSNPSRNQFIATKIYS 138
F GQIVA +G N S + F+ T+I S
Sbjct: 321 FCGQIVALKGKNVSGDYFLVTEILS 345
>gi|452985626|gb|EME85382.1| hypothetical protein MYCFIDRAFT_42760 [Pseudocercospora fijiensis
CIRAD86]
Length = 661
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
EI A+GRI CD GKLNA S+ LE G + L++ + FPG+IVA +G+N
Sbjct: 253 EIIAVGRIACDQPIGKLNAQSLALETSRRMGAGMRVPLRMADGASYDFFPGKIVALKGTN 312
Query: 126 PSRNQFIATKIYSDASLPLSETR 148
S F AT++ LP + +R
Sbjct: 313 VSGEYFAATEVIPMPILPSAASR 335
>gi|302662659|ref|XP_003022981.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
gi|291186956|gb|EFE42363.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
Length = 469
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +GKLN AS++LE T G + LK+ + + FPGQIVA RG
Sbjct: 71 TREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALRG 130
Query: 124 SNPSRNQF 131
N S F
Sbjct: 131 INASGEYF 138
>gi|74228759|dbj|BAE21869.1| unnamed protein product [Mus musculus]
Length = 600
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
+FP Q+V G N + + ATK+Y LP +
Sbjct: 296 LFPEQVVIMEGFNTTGRRLTATKLYEGVPLPFYQ 329
>gi|302497329|ref|XP_003010665.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
gi|291174208|gb|EFE30025.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
Length = 469
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +GKLN AS++LE T G + LK+ + + FPGQIVA RG
Sbjct: 71 TREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALRG 130
Query: 124 SNPSRNQF 131
N S F
Sbjct: 131 INASGEYF 138
>gi|449439345|ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
I A+G I CD +G LN S+LL+ SGG+ + L+L + ++FPGQ+V G NP
Sbjct: 252 IFAVGMIYCD-GEGHLNDKSILLQSSIAHSGGQRVRLELQNLSQFSIFPGQVVGIEGHNP 310
Query: 127 SRNQFIATKIYSDASLPLSET 147
S + IA+K+ S PLS T
Sbjct: 311 SGHCLIASKLVD--SFPLSAT 329
>gi|326472630|gb|EGD96639.1| DNA polymerase alpha/primase associated subunit [Trichophyton
tonsurans CBS 112818]
gi|326483559|gb|EGE07569.1| DNA polymerase subunit alpha B [Trichophyton equinum CBS 127.97]
Length = 664
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +GKLN AS++LE T G + LK+ + + FPGQIVA RG
Sbjct: 266 TREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALRG 325
Query: 124 SNPSRNQF 131
N S F
Sbjct: 326 INASGEYF 333
>gi|327292604|ref|XP_003231000.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
gi|326466806|gb|EGD92259.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
Length = 664
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +GKLN AS++LE T G + LK+ + + FPGQIVA RG
Sbjct: 266 TREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALRG 325
Query: 124 SNPSRNQF 131
N S F
Sbjct: 326 INASGEYF 333
>gi|356538103|ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 605
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
I A+G I CD +G+LN SV+L+ SGG + L L + ++FPGQIV G NP
Sbjct: 246 IFAVGMICCD-GEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIFPGQIVGIGGHNP 304
Query: 127 SRNQFIATKIYSDASLPLS----ETRPALDQ 153
S + F+ATK+ S+P S ++ PA Q
Sbjct: 305 SGHCFVATKLVD--SIPTSVADEDSNPAKKQ 333
>gi|212274797|ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
++ A+G + CD +G LN S+LL+G S G+ + L L + ++FPGQ+V G N
Sbjct: 256 KMFAVGTVACD-GEGHLNEKSILLQGSVEHSRGQCVRLDLKDLDHFSLFPGQVVGIEGHN 314
Query: 126 PSRNQFIATKIYS------DASLPLSETRPALDQNT 155
PS + F+A+K++ DA LP S + A+D +
Sbjct: 315 PSGHCFVASKLFDSIPVSVDAQLP-SAKKQAIDNES 349
>gi|13905292|gb|AAH06945.1| Pola2 protein [Mus musculus]
gi|148701241|gb|EDL33188.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Mus musculus]
Length = 360
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VA 112
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIY 137
+FPGQ+V G N + + ATK+Y
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLY 320
>gi|413916525|gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSN 125
++ A+G + CD +G LN S+LL+G S G+ + L L + ++FPGQ+V G N
Sbjct: 181 KMFAVGTVACD-GEGHLNEKSILLQGSVEHSRGQCVRLDLKDLDHFSLFPGQVVGIEGHN 239
Query: 126 PSRNQFIATKIYS------DASLPLSETRPALDQNT 155
PS + F+A+K++ DA LP S + A+D +
Sbjct: 240 PSGHCFVASKLFDSIPVSVDAQLP-SAKKQAIDNES 274
>gi|74202752|dbj|BAE37473.1| unnamed protein product [Mus musculus]
Length = 320
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 53 DITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-V 111
I P L + +G+I CD S+GKLN+ SV+LEGD+ S G I + L E
Sbjct: 196 KIEAFTPLLVPAQEPVILLGQIGCD-SNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEY 254
Query: 112 AVFPGQIVAARGSNPSRNQFIATKIY 137
++FPGQ+V G N + + ATK+Y
Sbjct: 255 SLFPGQVVIMEGFNTTGRRLTATKLY 280
>gi|356569195|ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
I A+G I CD +G+LN SV+L+ SGG + L L + ++FPGQIV G NP
Sbjct: 247 IFAVGMICCD-GEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIFPGQIVGIGGHNP 305
Query: 127 SRNQFIATKI 136
S + F+ATK+
Sbjct: 306 SGHCFVATKL 315
>gi|149062124|gb|EDM12547.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Rattus
norvegicus]
Length = 354
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L + +G+I CD S+G+LN+ SV+LEGD S G I + + E +
Sbjct: 237 IEAFTPLLVPAQEPVILLGQIGCD-SNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYS 295
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPGQ+V G N + + ATK+Y PL
Sbjct: 296 LFPGQVVIMEGFNTTGRRLTATKLYEVQGGPL 327
>gi|119478574|ref|XP_001259389.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
gi|119407543|gb|EAW17492.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
Length = 664
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARG 123
T+EI A+GRI D+ +GKLN AS++LE T G + L L A FPGQIVA +G
Sbjct: 266 TSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSVPSANFFPGQIVALKG 325
Query: 124 SNPSRNQFIATKI 136
N S N F ++
Sbjct: 326 INASGNYFSVKEV 338
>gi|326487588|dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
A+G ++CD +G+LN S+LL+G S G+ + L L + ++FPGQ+V G NPS
Sbjct: 260 AVGMVICD-GEGRLNEKSILLQGSVEHSRGQRVRLDLKDINQFSLFPGQVVGIEGHNPSG 318
Query: 129 NQFIATKIYSDASLPLS 145
+ F+A+K+ S+P+S
Sbjct: 319 HCFVASKLID--SIPVS 333
>gi|303314407|ref|XP_003067212.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106880|gb|EER25067.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037495|gb|EFW19432.1| DNA polymerase alpha/primase associated subunit [Coccidioides
posadasii str. Silveira]
Length = 657
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T ++ A+GRI D+ +G+LN AS++ E T G + LK+ V +FPGQIVA +G
Sbjct: 260 TRKVIAVGRIASDSMEGRLNTASLVFEMSRRTGAGLRVPLKVDSLPSVQLFPGQIVAIKG 319
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPAL 151
N S F A ++ LP + + P +
Sbjct: 320 INASGEYFSALEVLQPPFLPPAASSPEI 347
>gi|67541370|ref|XP_664459.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
gi|40739064|gb|EAA58254.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
Length = 905
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + GR + L + V FPGQIVA G
Sbjct: 510 TNEIVAVGRIASDSPEGKLNPASLVLETSRRSGAGRRVPLNVDSIPSVNFFPGQIVALLG 569
Query: 124 SNPSRNQFIATKI 136
N S N F ++
Sbjct: 570 INASGNYFSVKEV 582
>gi|259480453|tpe|CBF71599.1| TPA: DNA polymerase alpha/primase associated subunit
(AFU_orthologue; AFUA_5G13020) [Aspergillus nidulans
FGSC A4]
Length = 682
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
T EI A+GRI D+ +GKLN AS++LE + GR + L + V FPGQIVA G
Sbjct: 287 TNEIVAVGRIASDSPEGKLNPASLVLETSRRSGAGRRVPLNVDSIPSVNFFPGQIVALLG 346
Query: 124 SNPSRNQFIATKI 136
N S N F ++
Sbjct: 347 INASGNYFSVKEV 359
>gi|315042075|ref|XP_003170414.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
gi|311345448|gb|EFR04651.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
Length = 664
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
T E+ A+GRI D+ +G+LN AS++LE T G + LK+ + + FPGQIVA RG
Sbjct: 266 TREVIAVGRIASDSPEGRLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALRG 325
Query: 124 SNPSRNQF 131
N S F
Sbjct: 326 INASGEYF 333
>gi|302794414|ref|XP_002978971.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
gi|300153289|gb|EFJ19928.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
Length = 590
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ +I +GR+ DT + NA VLLEG SGG + L L E + ++FPGQI+
Sbjct: 213 YASQEKILVVGRVCYDTEEADPNA--VLLEGSVEYSGGHRVRLDLREISQFSLFPGQILV 270
Query: 121 ARGSNPSRNQFIATKIYSDASLP 143
G NPS + +A++I+ LP
Sbjct: 271 VEGHNPSGHCLVASRIFYSLPLP 293
>gi|302824727|ref|XP_002994004.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
gi|300138166|gb|EFJ04944.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
Length = 590
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ +I +GR+ DT + NA VLLEG SGG + L L E + ++FPGQI+
Sbjct: 213 YASQEKILVVGRVCYDTEEADPNA--VLLEGSVEYSGGHRVRLDLREISQFSLFPGQILV 270
Query: 121 ARGSNPSRNQFIATKIYSDASLP 143
G NPS + +A++I+ LP
Sbjct: 271 VEGHNPSGHCLVASRIFYSLPLP 293
>gi|343173002|gb|AEL99204.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
I A+G I CD +G+LN SVLL+ SGG+ + L+L + + +FPGQ++ G NP
Sbjct: 159 IFAVGMICCD-GEGRLNEKSVLLQSSVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNP 217
Query: 127 SRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKGLP 169
S + +A+K+ P S D + K + E GLP
Sbjct: 218 SGHCLVASKVEDLIPFPASS-----DCDLHPVKRQALDEDGLP 255
>gi|343173000|gb|AEL99203.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
I A+G I CD +G+LN SVLL+ SGG+ + L+L + + +FPGQ++ G NP
Sbjct: 159 IFAVGMICCD-GEGRLNEKSVLLQSSVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNP 217
Query: 127 SRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKGLP 169
S + +A+K+ P S D + K + E GLP
Sbjct: 218 SGHCLVASKVDDLIPFPASS-----DCDLHPVKRQAVDEDGLP 255
>gi|242095348|ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSN 125
++ A+G + CD +G LN S+LL+G S G+ + L L + ++FPGQ+V G N
Sbjct: 256 KMFAVGTVACD-GEGHLNEKSILLQGSVQHSRGQRVRLDLKDLDHFSLFPGQVVGIEGHN 314
Query: 126 PSRNQFIATKIYS------DASLPLSETRPALDQNT 155
PS + F+A+K+ DA LP S + A+D +
Sbjct: 315 PSGHCFVASKLIDSIPVSVDAQLP-SAKKQAIDNES 349
>gi|225425850|ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product [Vitis vinifera]
Length = 623
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
+ A G I CD +G+LN S+LL+ SGG+ + L L + ++FPGQ+V G NP
Sbjct: 252 VFATGMICCD-GEGRLNEKSILLQSSVQHSGGQRVRLDLSKLNQFSIFPGQVVGIEGHNP 310
Query: 127 SRNQFIATKIYSDASLPLS 145
S + IA+KI S+P+S
Sbjct: 311 SGHCLIASKILD--SIPVS 327
>gi|108862394|gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
gi|215693905|dbj|BAG89104.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
++G ++CD +G LN S+LL+G S G+ + L L + ++FPGQ+V +G NPS
Sbjct: 3 SVGMVICD-GEGHLNEKSILLQGSVEHSRGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSG 61
Query: 129 NQFIATKI------YSDASLPLSETR 148
+ F+ +K+ + DA LP ++ +
Sbjct: 62 HCFVVSKLNDSIPNFVDAQLPRAKKQ 87
>gi|115487992|ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial [Oryza sativa Japonica Group]
Length = 400
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
++G ++CD +G LN S+LL+G S G+ + L L + ++FPGQ+V +G NPS
Sbjct: 35 SVGMVICD-GEGHLNEKSILLQGSVEHSRGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSG 93
Query: 129 NQFIATKI------YSDASLPLSETR 148
+ F+ +K+ + DA LP ++ +
Sbjct: 94 HCFVVSKLNDSIPNFVDAQLPRAKKQ 119
>gi|222616877|gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
++G ++CD +G LN S+LL+G S G+ + L L + ++FPGQ+V +G NPS
Sbjct: 260 SVGMVICD-GEGHLNEKSILLQGSVEHSRGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSG 318
Query: 129 NQFIATKI------YSDASLPLSETR 148
+ F+ +K+ + DA LP ++ +
Sbjct: 319 HCFVVSKLNDSIPNFVDAQLPRAKKQ 344
>gi|218186644|gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSR 128
++G ++CD +G LN S+LL+G S G+ + L L + ++FPGQ+V +G NPS
Sbjct: 260 SVGMVICD-GEGHLNEKSILLQGSVEHSRGQRVRLDLKDVDRFSLFPGQVVGIQGHNPSG 318
Query: 129 NQFIATKI------YSDASLPLSETR 148
+ F+ +K+ + DA LP ++ +
Sbjct: 319 HCFVVSKLNDSIPNFVDAQLPRAKKQ 344
>gi|301114883|ref|XP_002999211.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
gi|262111305|gb|EEY69357.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
Length = 624
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARGSN 125
++T +GRIVC+ ++GKLN + +EG T GG+ + L L +FPG+IVA G
Sbjct: 245 QVTVVGRIVCEAAEGKLNPSVAQIEGSRKTCGGQRVLLDLSAVPNFQIFPGKIVALEGVF 304
Query: 126 PSRNQFIATKIY 137
P +A K +
Sbjct: 305 PDTRSPLAVKRF 316
>gi|348683854|gb|EGZ23669.1| hypothetical protein PHYSODRAFT_480522 [Phytophthora sojae]
Length = 629
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV---AVFPGQIVAARG 123
++ +GRIVC+ ++GKLN + V LEG T GG+ + L L +GV VFPG++VA G
Sbjct: 250 QVAVVGRIVCEAAEGKLNPSVVQLEGTRKTCGGQRVLLDL--SGVPNFQVFPGKMVALEG 307
Query: 124 SNP-SRNQFIATKIYSDASLPLSETRPA 150
P +R+ + P + + PA
Sbjct: 308 VFPDTRSPMTVKRFLEPIPAPPATSTPA 335
>gi|242003174|ref|XP_002422639.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
gi|212505440|gb|EEB09901.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
Length = 460
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 33 WISNLSQFNAIIGLGTVTIGDITLL--VPFLFGDTTEITAIGRIVCDTSDGKLNAASVLL 90
W N+ + +G + IG +L +P T +GRI CD +G+L + ++LL
Sbjct: 106 WNDNIEK------IGKLIIGKYSLEEEMPMNHRGVTPFILVGRIACD-GEGRLKSKNILL 158
Query: 91 EGDEVTSGGRSISLKLPET-GVAVFPGQIVAARGSNPSRNQFIATKIYSDASL 142
EG + G S+ L L ++FPGQ+VAA + ++ + + ++Y+D +L
Sbjct: 159 EGTSDNASGTSVDLDLSVLPKYSIFPGQVVAAEVYSLTKERLVVKQLYTDTNL 211
>gi|430812479|emb|CCJ30096.1| unnamed protein product [Pneumocystis jirovecii]
Length = 629
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 66 TEITAIGRIVCDT-SDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARG 123
EI A+GRI+CD+ S G+LN S++LE G + L + A+FPGQI+ +G
Sbjct: 248 NEIVAVGRIICDSDSGGRLNTTSIILETSRRFGAGSRVLLHVDSLRSYALFPGQILGVKG 307
Query: 124 SNPSRNQFIATKIYSDASLPLSET 147
N S + F + LP S T
Sbjct: 308 INSSGSYFSVREFLMLPLLPFSAT 331
>gi|388504218|gb|AFK40175.1| unknown [Medicago truncatula]
Length = 447
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSR 128
+IG I CD +G+LN SV+L+ SGG + L L +VFPGQ+V G NPS
Sbjct: 252 SIGMICCD-GEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSVFPGQVVGIGGHNPSG 310
Query: 129 NQFIATKI--YSDASLPLSETRPALDQ 153
+ +A+K+ Y S+ + P+ Q
Sbjct: 311 HCLVASKLVDYIPTSVAKEDLNPSKKQ 337
>gi|168039083|ref|XP_001772028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676629|gb|EDQ63109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIV-AARGS 124
++ +GRI CD ++G LN S+LLEG S G+ + L L + FPGQ+V G
Sbjct: 249 KVMVVGRICCD-AEGHLNDNSILLEGSVEHSNGQRVRLDLRNIPRFSFFPGQVVLGVEGQ 307
Query: 125 NPSRNQFIATKIYSDASLPLSET 147
NPS +AT+I+ S+P+S +
Sbjct: 308 NPSGFCLMATRIFD--SIPVSSS 328
>gi|384488367|gb|EIE80547.1| hypothetical protein RO3G_05252 [Rhizopus delemar RA 99-880]
Length = 512
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRNQ 130
GRI D S+GKLNA SV+LE + G+ I L L + ++FPGQIV +G N + N
Sbjct: 212 GRICSDASEGKLNAESVMLETSKELGMGKRIKLDLSKLQDYSLFPGQIVGVQGFNRNGNS 271
Query: 131 FIATKIY 137
F I+
Sbjct: 272 FQVECIH 278
>gi|325180869|emb|CCA15279.1| DNA polymerase subunit alpha B putative [Albugo laibachii Nc14]
Length = 624
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
+T +GRI+C+ S+G++NA V LEG + GG+ + L L + +FPG+IVA G
Sbjct: 230 VTIVGRILCEASEGRMNANVVELEGSRRSCGGQRVLLDLSGLSSFQLFPGKIVALEGVYA 289
Query: 127 SRNQFIATKIYSDA-SLPLSETR-----PALDQNTEMYKLRVSYEKG 167
+A K + D+ P++ +R P L + +E + LR+ G
Sbjct: 290 DVRGSMAVKRFLDSLPAPVATSRKEDLEPFLTE-SEFHPLRIFLASG 335
>gi|357463079|ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit B [Medicago truncatula]
Length = 616
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 70 AIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSR 128
+IG I CD +G+LN SV+L+ SGG + L L +VFPGQ+V G NPS
Sbjct: 252 SIGMICCD-GEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSVFPGQVVGIGGHNPSG 310
Query: 129 NQFIATKI 136
+ +A+K+
Sbjct: 311 HCLVASKL 318
>gi|365982203|ref|XP_003667935.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
gi|343766701|emb|CCD22692.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
Length = 705
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVT 96
I + T I + L P F D T EI +GRIV D T +G+LN S+ LE +
Sbjct: 279 IEIFTKIIQEHYNLSPNQFSDPTIQSQSEIYTVGRIVPDSPTFEGRLNTESIALETSRIL 338
Query: 97 SGGRSISLKLPETG-VAVFPGQIVAARGSNPSRNQFIATKI----YSDASLPLSETRPAL 151
GR + L L +++F GQIV RG N + F+ +I Y DA + E
Sbjct: 339 GIGRRVRLDLSNIKELSLFCGQIVGLRGKNANNENFLVDEILSLPYPDAPVSTEEEIKGF 398
Query: 152 DQNTEMYKLRV 162
+N ++V
Sbjct: 399 QENFNNETMKV 409
>gi|393233321|gb|EJD40894.1| DNA polymerase alpha, subunit B [Auricularia delicata TFB-10046
SS5]
Length = 529
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLE-GDEVTSGGR-------SISLK--LP--ETGVAVF 114
++ +GRI CD D K+N AS++LE E+ SG R +++++ LP +TG+ VF
Sbjct: 179 DVIVVGRICCD-EDAKINEASIVLEVSREIGSGARVPIKFAPNVAMRGGLPAGQTGMGVF 237
Query: 115 PGQIVAARGSNPSRNQFIATKIYSDASLPLS-ETRP 149
PG + A RG N F+ +I LP E RP
Sbjct: 238 PGAMAAFRGRNGGGGWFVVNEILPLPKLPRKDEARP 273
>gi|366988531|ref|XP_003674032.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
gi|342299895|emb|CCC67651.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
Length = 679
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GR+V D+ ++G+LN S+ LE V GR + L L +
Sbjct: 268 LSPSQFSDPTIQSQSEIYAVGRVVPDSPNAEGRLNTESLALETSRVMGIGRRVRLDLKKV 327
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI----YSDA 140
+++F GQIVA +G N + F+ +I Y DA
Sbjct: 328 EELSMFSGQIVALKGKNANGEYFLVDEILPLPYPDA 363
>gi|50304257|ref|XP_452078.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641210|emb|CAH02471.1| KLLA0B12309p [Kluyveromyces lactis]
Length = 649
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 51 IGDITLLVPFLFGDTTEITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPE 108
IGD T F +E+ +GRIV D+ ++G LN S+ +E T GR I L +
Sbjct: 243 IGDPT------FQQQSEVYTVGRIVPDSVNAEGPLNVDSLAIETSRSTGIGRRIRLNFEK 296
Query: 109 -TGVAVFPGQIVAARGSNPSRNQFIATKI 136
++VFPGQIVA +G N + F+ I
Sbjct: 297 IQNLSVFPGQIVALKGKNANGEYFVVEDI 325
>gi|297841461|ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
gi|297334453|gb|EFH64871.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
Length = 619
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
I A+G I CD +G LN SVLL+ + G+ + L L ++FPGQIV G NP
Sbjct: 251 IFAVGMICCD-GEGHLNDKSVLLQSSAERTSGQRVPLDLNRLDQFSIFPGQIVGIEGQNP 309
Query: 127 SRNQFIATKIYSDASLPL 144
S + A+K+ S+PL
Sbjct: 310 SGHYLTASKLLD--SVPL 325
>gi|223998634|ref|XP_002288990.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976098|gb|EED94426.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKL--------PETGVAVFPGQI 118
++ +GRI + +G+LN AS+ LEG S G I L L + FPGQI
Sbjct: 302 KVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQI 361
Query: 119 VAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSY----EKGLPLA 171
VA G N S A+++Y P ++++T ++ +Y + G+PL+
Sbjct: 362 VAVEGINSSGRTMQASRLYEGVP-------PPVEKSTAKELIKYNYGPDGQNGMPLS 411
>gi|149247859|ref|XP_001528317.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448271|gb|EDK42659.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 673
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 67 EITAIGRIVCDT---SDGK-LNAASVLLEGDEVTSGGRSISLKL-PETGVAVFPGQIVAA 121
+I GRIV D+ +D + +N++S+ LE +T G+ ++L L P +G ++FPGQIV
Sbjct: 243 DILCCGRIVPDSPSYNDKEIMNSSSLFLETSRITGVGQRVALDLTPLSGYSLFPGQIVVL 302
Query: 122 RGSNPSRNQFIATKI 136
+G NP+ F+ ++
Sbjct: 303 KGKNPTGKVFLVNEV 317
>gi|290982320|ref|XP_002673878.1| DNA polymerase alpha subunit B [Naegleria gruberi]
gi|284087465|gb|EFC41134.1| DNA polymerase alpha subunit B [Naegleria gruberi]
Length = 544
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 71 IGRIVCD--TSDGKLNAASVLLEG--DEVTSGGRSISLKLPETGV------AVFPGQIVA 120
IGRI+ + T D KLN AS+LLEG + TS + I L + G+ +FPGQIVA
Sbjct: 188 IGRILAESVTGDDKLNPASILLEGLTNAETSDCKVIKLSFDKFGLDSGVSQTLFPGQIVA 247
Query: 121 ARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVS 163
+G N S KIY+ A L E +P + K+ V+
Sbjct: 248 IKGLN-SVQGLKVEKIYTGAPLDAPEDQPQPSDEKKKIKIMVA 289
>gi|19075265|ref|NP_587765.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe 972h-]
gi|6015008|sp|O74946.1|DPOA2_SCHPO RecName: Full=DNA polymerase alpha subunit B
gi|3169066|emb|CAA19261.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe]
Length = 574
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 81 GKLNAASVLLEGDEVTSGGRSISLKLPET-GVAVFPGQIVAARGSNPSRNQFIATK 135
G+LN S+LLE G + LK+ + ++FPGQIV+ +GSNPS N FIA +
Sbjct: 220 GRLNQNSILLESSRRLGAGVRVRLKVDDLPSYSIFPGQIVSVKGSNPSGNMFIAKE 275
>gi|241123071|ref|XP_002403775.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
gi|215493525|gb|EEC03166.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
Length = 273
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRNQ 130
GR++CD+S GK+NA S++LEG + +S G S+ L L +VFPGQ++ A+G+N +
Sbjct: 110 GRVLCDSS-GKINANSLILEGSK-SSYGHSVKLNLSRLKQFSVFPGQVIVAKGANANGQN 167
Query: 131 FIATKI 136
+ ++
Sbjct: 168 LVLEEL 173
>gi|12324682|gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
Length = 620
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
I A+G I CD +G LN S+LL+ + G+ + + L ++FPGQ+V G NP
Sbjct: 252 IFAVGMICCD-GEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQVVGIEGQNP 310
Query: 127 SRNQFIATKIYSDASLPLSET 147
S + A+K+ S+PL+ T
Sbjct: 311 SGHYLTASKLLD--SVPLTLT 329
>gi|367015348|ref|XP_003682173.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
gi|359749835|emb|CCE92962.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
Length = 666
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 62 FGDTT-----EITAIGRIVCDT-SDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVF 114
FGD T EI A+GRIV ++ SD +N S+ LE + GR + L L + V++F
Sbjct: 257 FGDPTIQAQSEIHAVGRIVPESPSDESVNTESLALETSRMAGIGRRVRLNLTDVNEVSLF 316
Query: 115 PGQIVAARGSNPSRNQFIATKI 136
GQIVA +G N + F AT+
Sbjct: 317 LGQIVAVKGKNADGDSFKATEF 338
>gi|403217008|emb|CCK71503.1| hypothetical protein KNAG_0H00880 [Kazachstania naganishii CBS
8797]
Length = 672
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 15 KIRPEWESNPQPSAYRIPWI-SNLSQ----FNAIIGLGTVTIGDITLLVPFLFGDTT--- 66
KI+P ++ PS Y+ + NL + N I + T + L FGD T
Sbjct: 213 KIQPYYD----PSKYKFRIMRQNLVESSEVLNEQIEIFTKLVQAHLKLTDSDFGDPTIQS 268
Query: 67 --EITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
I A+GRIV D+ ++G LN S+ LE + GR I LKL + ++F GQIVA
Sbjct: 269 QNVIYAVGRIVPDSPSAEGFLNEQSLSLETSRLNGIGRRIRLKLDNISDTSLFVGQIVAL 328
Query: 122 RGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYK 159
+GSN + F+ I +P + + +++ +YK
Sbjct: 329 KGSNANGEAFLVEDIL---DMPYPDAPVSTEEDINLYK 363
>gi|30697540|ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana]
Length = 620
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
I A+G I CD +G LN S+LL+ + G+ + + L ++FPGQ+V G NP
Sbjct: 252 IFAVGMICCD-GEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQVVGIEGQNP 310
Query: 127 SRNQFIATKIYSDASLPLSET 147
S + A+K+ S+PL+ T
Sbjct: 311 SGHYLTASKLLD--SVPLTLT 329
>gi|26452176|dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis thaliana]
Length = 620
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNP 126
I A+G I CD +G LN S+LL+ + G+ + + L ++FPGQ+V G NP
Sbjct: 252 IFAVGMICCD-GEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQVVGIEGQNP 310
Query: 127 SRNQFIATKIYSDASLPLSET 147
S + A+K+ S+PL+ T
Sbjct: 311 SGHYLTASKLLD--SVPLTLT 329
>gi|302850345|ref|XP_002956700.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
gi|300258061|gb|EFJ42302.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
Length = 1377
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAARGSNPSR 128
GR++ +T LN+ S+LLEG SGG + L LP +FPGQ + A G NP+
Sbjct: 369 GRVLAETEGAPLNSESLLLEGCREASGGARVRLDVSCLP--AYRLFPGQSICAYGLNPTG 426
Query: 129 NQFIATKI 136
+FIA K+
Sbjct: 427 GKFIAQKL 434
>gi|354546489|emb|CCE43219.1| hypothetical protein CPAR2_208640 [Candida parapsilosis]
Length = 642
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 67 EITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISL---KLPETGVAVFPGQIVA 120
+I GRIV D+ + LN+ S+ LE ++ G+ + L KLP G + FPGQIV
Sbjct: 230 DILCCGRIVPDSPTYDNETLNSNSLFLETSRLSGIGQRVPLDLSKLP--GFSFFPGQIVV 287
Query: 121 ARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEM 157
+G NP+ F+A ++ +PL E + +E+
Sbjct: 288 LKGRNPTGKHFVAEEV-----MPLPEMGTPVSSRSEL 319
>gi|320166831|gb|EFW43730.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 649
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPS 127
T GRI D +GKLN S+LLEG G I L + + FPGQIV A+G N +
Sbjct: 282 TVAGRICSDAGNGKLNDVSILLEGSRDVCNGVRIPLDMRSLDHFSAFPGQIVVAQGYNIT 341
Query: 128 RNQFIAT--KIYSDASLPLSETRPA 150
+F ++ A P+ +T A
Sbjct: 342 GTKFSVQPHSFFTSAPKPMQQTETA 366
>gi|294659121|ref|XP_461461.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
gi|202953633|emb|CAG89880.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
Length = 702
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 67 EITAIGRIVCDT------SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIV 119
+I GRIV D+ + LNA ++ LE +T G+ I L + + FPGQIV
Sbjct: 277 DILCCGRIVPDSPLYDKSGNQALNATTLYLETSRLTGIGQRIPLNMNQLEEYTFFPGQIV 336
Query: 120 AARGSNPSRNQFIATKI--YSDASLPLSETRPALDQNTEM 157
+G NP+ FI ++ + + PLS R LD+ EM
Sbjct: 337 CLKGRNPTGQSFIVQEVLPFPELGAPLS-NRQELDEYKEM 375
>gi|159463398|ref|XP_001689929.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
gi|158283917|gb|EDP09667.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
Length = 722
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLK---LPETGVAVFPGQIVAARGSNPSR 128
GR++ + LN S+LLEG SGG + L LP G +FPGQ V A G NP+
Sbjct: 349 GRVLAEAEGAPLNGESLLLEGCREASGGARVRLDVSCLP--GYRLFPGQSVCAYGLNPTG 406
Query: 129 NQFIATKIYS 138
++FIA ++ +
Sbjct: 407 SRFIAQRLVT 416
>gi|385303916|gb|EIF47960.1| b subunit of dna polymerase alpha-primase complex [Dekkera
bruxellensis AWRI1499]
Length = 208
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 66 TEITAIGRIVCDTS----DGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVA 120
EI A+GRIV D+ D LN S+ LE G + L L ++FPGQIV
Sbjct: 43 AEILAVGRIVXDSPLTEYDADLNXDSLFLEASRSGGIGERVRLDLAALDEYSLFPGQIVC 102
Query: 121 ARGSNPSRNQFIATKIYS 138
RG NP+ F TK Y+
Sbjct: 103 FRGLNPTGTVFKVTKQYN 120
>gi|346466585|gb|AEO33137.1| hypothetical protein [Amblyomma maculatum]
Length = 543
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRNQ 130
GR++CD+ GKLNA+S++LEG +S G S+ L + + T ++FPGQ++ +G+NP++
Sbjct: 206 GRVLCDSC-GKLNASSLILEG-SESSSGHSVKLDVSKLTQYSLFPGQVIVGKGTNPTQET 263
Query: 131 FIATKIYSDASLPLSETRPAL 151
+ +++ LP P+L
Sbjct: 264 VVLKELFDGKMLPFPSQAPSL 284
>gi|409040116|gb|EKM49604.1| hypothetical protein PHACADRAFT_166969 [Phanerochaete carnosa
HHB-10118-sp]
Length = 567
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 62 FGDTT-----EITAIGRIVCDT-----SDGKLNAASVLLEGDEVTSGGRSISLKLPET-- 109
FGD E T +GRIV D S KLN A++ LE G +SL+L
Sbjct: 189 FGDPAKSTEEETTIVGRIVFDADSTSASAVKLNEATLTLEASRSMGSGVRVSLRLDPNVR 248
Query: 110 ---------GVAVFPGQIVAARGSNPSRNQFIATKIYSDASLP 143
GV FPG IVA RGSN F T++ SLP
Sbjct: 249 LKGAKKGIGGVGFFPGAIVALRGSNGGGGWFTVTEVLPLPSLP 291
>gi|308809287|ref|XP_003081953.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
gi|116060420|emb|CAL55756.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
Length = 650
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 71 IGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPS 127
+GRIV SDGKL +V LEG S G + L+L + ++FPGQ+V RG NP+
Sbjct: 290 VGRIVSAHVGSDGKLTDKTVALEGSIDGSSGARVRLELRDLESYSLFPGQVVKVRGRNPA 349
Query: 128 RNQFIATKIYSDASL-PLSETR 148
+ +A I +D S+ P + ++
Sbjct: 350 GHCIVAKYIDTDVSVKPFARSK 371
>gi|448084616|ref|XP_004195650.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359377072|emb|CCE85455.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 39 QFNAIIGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDT------SDGKLNAASVLLEG 92
Q +++ + + DI L P L +I GRIV D+ S+ LNA+++ LE
Sbjct: 247 QIDSMASIIQESKHDIELSNPCL-SSQFDIYCCGRIVPDSPLYDKSSNQTLNASALYLET 305
Query: 93 DEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
++ G+ + L L E ++FPGQIV +G NP+ +F +I LPL E
Sbjct: 306 SRLSGVGQRVPLNLSELEEYSLFPGQIVFLKGRNPTGQEFSVKEI-----LPLPE 355
>gi|353237594|emb|CCA69563.1| related to POL12 (DNA-directed DNA polymerase alpha)
[Piriformospora indica DSM 11827]
Length = 487
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKL--------PETGVAVFPGQI 118
++ +GRI CD D KLN ASV LE + G ++LK + + ++PG I
Sbjct: 121 DVIVVGRICCD-GDTKLNEASVELETSRLMGAGARVALKFDPNVSSNGDSSMLPLYPGAI 179
Query: 119 VAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKG 167
VA +G N + + F ++I LPL +D N + + + ++ G
Sbjct: 180 VALKGRNETGSWFQVSQILMLPLLPLD-----IDSNRQEHPISMAIAAG 223
>gi|448511801|ref|XP_003866617.1| Pol12 protein [Candida orthopsilosis Co 90-125]
gi|380350955|emb|CCG21178.1| Pol12 protein [Candida orthopsilosis Co 90-125]
Length = 645
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 67 EITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAAR 122
+I GRIV D+ LN+ S+ LE ++ G+ + L L + G + FPGQIV +
Sbjct: 233 DILCCGRIVPDSPMYDSETLNSNSLFLETSRLSGIGQRVPLGLSKLAGFSFFPGQIVVLK 292
Query: 123 GSNPSRNQFIATKIYSDASL--PLSETRPALDQNTEM 157
G NP+ QF+ ++ + L P+S +R L++ ++
Sbjct: 293 GRNPTGKQFVVEEVMTLPQLGTPVS-SRSELEEYNQL 328
>gi|448080138|ref|XP_004194551.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359375973|emb|CCE86555.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 39 QFNAIIGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDT------SDGKLNAASVLLEG 92
Q + + + + DI L P L +I GRIV D+ S+ LNA+++ LE
Sbjct: 247 QIDTMASIISENKKDIELNNPCL-SSQFDIYCCGRIVPDSPLYDKSSNQTLNASALYLET 305
Query: 93 DEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSE 146
++ G+ + L L E ++FPGQIV +G NP+ +F +I LPL E
Sbjct: 306 SRLSGVGQRVPLNLSELEEYSLFPGQIVFLKGRNPTGQEFSVKEI-----LPLPE 355
>gi|150865942|ref|XP_001385361.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
gi|149387198|gb|ABN67332.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
Length = 685
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 61 LFGDTT-----EITAIGRIVCD------TSDGKLNAASVLLEGDEVTSGGRSISLKLPE- 108
LFG+ +I GRIV D T+ +LN+ S+ LE + G+ I L L +
Sbjct: 253 LFGNPCISSQFDINCCGRIVPDSPNYDKTASVQLNSTSLYLETSRINGIGQRIPLDLSQL 312
Query: 109 TGVAVFPGQIVAARGSNPSRNQFIATKI 136
G + FPGQIV RG NP+ F ++
Sbjct: 313 KGYSFFPGQIVLLRGRNPTGRSFTIKEV 340
>gi|380804257|gb|AFE74004.1| DNA polymerase alpha subunit B, partial [Macaca mulatta]
Length = 169
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 54 ITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVA 112
I P L +T +G+I CD S+GKLN SV+LEGD S G I + L E +
Sbjct: 105 IEAFTPLLAPAQEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYS 163
Query: 113 VFPGQI 118
+FPGQ+
Sbjct: 164 LFPGQV 169
>gi|390603438|gb|EIN12830.1| DNA polymerase alpha subunit B [Punctularia strigosozonata
HHB-11173 SS5]
Length = 580
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 67 EITAIGRIVCDTSDG-----KLNAASVLLEGDEVTSGGRSISLKLPET-----------G 110
E T +GRIV D G K+N AS++LE + G + L+ G
Sbjct: 195 ETTVVGRIVLDFESGSTGGVKINEASLVLESSRLMGSGARVPLRFEPNVKIRGFVKGAGG 254
Query: 111 VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLS 145
+FPG +VA RG+N F ++I ++ LP S
Sbjct: 255 AGLFPGALVALRGTNGGGGSFTVSEILANPPLPSS 289
>gi|323338794|gb|EGA80009.1| Pol12p [Saccharomyces cerevisiae Vin13]
Length = 565
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 138 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 197
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 198 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 249
>gi|323334744|gb|EGA76117.1| Pol12p [Saccharomyces cerevisiae AWRI796]
Length = 550
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 123 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 182
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 183 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 234
>gi|190408861|gb|EDV12126.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 705
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 389
>gi|323356256|gb|EGA88060.1| Pol12p [Saccharomyces cerevisiae VL3]
Length = 550
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 123 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 182
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 183 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 234
>gi|256272739|gb|EEU07712.1| Pol12p [Saccharomyces cerevisiae JAY291]
gi|259144812|emb|CAY77751.1| Pol12p [Saccharomyces cerevisiae EC1118]
Length = 705
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 389
>gi|365767038|gb|EHN08526.1| Pol12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 705
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQTSLE 389
>gi|156836867|ref|XP_001642474.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113008|gb|EDO14616.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 670
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 62 FGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAV 113
FGD T EI +GRIV D T++G LN S+ LE GR + L L + + +
Sbjct: 262 FGDPTIQSQSEIYTVGRIVPDSPTAEGFLNTESLALETSRSGGIGRRVRLDLTKVAELTL 321
Query: 114 FPGQIVAARGSNPSRNQFIATKIYS 138
F GQ+VA +G N + + F+ +I S
Sbjct: 322 FCGQLVAFKGKNANGDYFMVEEIIS 346
>gi|254585985|ref|XP_002498560.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
gi|238941454|emb|CAR29627.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
Length = 651
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 62 FGDTT-----EITAIGRIVCDTS--DGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAV 113
FGD T E+ +GRIV D+S + LN S+ LE + GR I L L V+
Sbjct: 241 FGDPTIQAQSELYTVGRIVPDSSSSEDHLNEESLALETSRMGGVGRRIRLDLSNVNEVSF 300
Query: 114 FPGQIVAARGSNPSRNQFIATKIYS 138
F GQIVA +G N + F +++ S
Sbjct: 301 FCGQIVALKGKNANDEYFTVSEVLS 325
>gi|207347854|gb|EDZ73899.1| YBL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 634
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 207 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 266
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYE 165
++ F GQIVA +G N + + F I LPL + + E+ + + S E
Sbjct: 267 NELSFFLGQIVAFKGKNANGDYFTVNSI-----LPLPYPNSPVSTSQELQEFQASLE 318
>gi|331249355|ref|XP_003337295.1| hypothetical protein PGTG_18794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316285|gb|EFP92876.1| hypothetical protein PGTG_18794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLP-----------ETGVAVFP 115
+I A GRI +T D K++ + LE + GR I L+ E G+ +FP
Sbjct: 153 DIWAYGRICAETQDSKISDQACWLETSRMIGHGRRIRLQWADDLKVHGVGSQEEGIGLFP 212
Query: 116 GQIVAARGSNPSRNQFIATKIY 137
G IV RG N F +IY
Sbjct: 213 GAIVGLRGRNGGGTYFSVQEIY 234
>gi|336369696|gb|EGN98037.1| hypothetical protein SERLA73DRAFT_91246 [Serpula lacrymans var.
lacrymans S7.3]
Length = 591
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 68 ITAIGRIVCD----TSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV----------AV 113
IT +GRIV D +S KLN AS+LLE + G I ++ T + +
Sbjct: 197 ITVVGRIVLDAETSSSGAKLNEASLLLESSRMMGSGTRIPIRFQGTKIRGGPKGVGGMGL 256
Query: 114 FPGQIVAARGSN 125
FPG I+AARG N
Sbjct: 257 FPGAIIAARGKN 268
>gi|367006837|ref|XP_003688149.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
gi|357526456|emb|CCE65715.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
Length = 667
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 62 FGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAV 113
FGD T EI A+GRIV D T++G LN S+ LE + GR + L + ++
Sbjct: 259 FGDPTIQSQSEIYAVGRIVPDSPTAEGFLNIDSLALEASRLMGIGRRVRLNFSKINECSL 318
Query: 114 FPGQIVAARGSNPSRNQFIATKI 136
F GQI+ +G N + F+ +I
Sbjct: 319 FCGQIIVLKGKNADGDYFMVDEI 341
>gi|320581839|gb|EFW96058.1| B subunit of DNA polymerase alpha-primase complex [Ogataea
parapolymorpha DL-1]
Length = 603
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 67 EITAIGRIVCDT----SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
EI +GRIV D+ SD LNA S+ LE + G+ I L L + FPGQIV
Sbjct: 217 EILTVGRIVPDSPLTASDADLNANSLFLETSRLGGIGQRIKLDLSSLQNYSFFPGQIVCF 276
Query: 122 RGSNPSRNQFIATKIY 137
RG N + F T+ +
Sbjct: 277 RGQNLTGEFFKVTETH 292
>gi|363755740|ref|XP_003648085.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892121|gb|AET41268.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
Length = 652
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 45 GLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDT-SDGKLNAASVLLEGDEVTSGGRSIS 103
LG +GD T+ + + GRIV DT D +LN SV +E GR I
Sbjct: 243 NLGNSDLGDPTI------QSQSALICTGRIVPDTPCDERLNMDSVAIETSRSAGIGRRIR 296
Query: 104 LKLPETG-VAVFPGQIVAARGSNPSRNQFIATKI 136
L L + ++FPGQ++A RG N + F +I
Sbjct: 297 LNLDDVKECSLFPGQLIALRGKNANGEYFKVEEI 330
>gi|209876758|ref|XP_002139821.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209555427|gb|EEA05472.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 598
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 52 GDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-- 109
G+ ++P ++ +G+I CD ++ LN S+LL G SGG + L++ T
Sbjct: 201 GEKYPIIPVGESRKQKVVTLGQIACD-NESHLNEQSILLIGSRERSGGHTCELRIRNTIK 259
Query: 110 GVAVFPGQIVAARGSNPSRNQF 131
+ ++PGQIVA G N N+F
Sbjct: 260 DITLYPGQIVAVIG-NSEINEF 280
>gi|349576345|dbj|GAA21516.1| K7_Pol12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 705
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI----YSDASLPLSETRPALDQNTEMYKLRV 162
++ F GQIVA +G N + + F I Y ++ + S+ N E L+V
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSILPLPYPNSPVSTSQELQEFQANLEGSSLKV 395
>gi|6319436|ref|NP_009518.1| Pol12p [Saccharomyces cerevisiae S288c]
gi|585063|sp|P38121.1|DPOA2_YEAST RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase I subunit B; AltName: Full=DNA polymerase
alpha:primase complex p86 subunit; Short=Pol
alpha-primase complex p86 subunit; AltName: Full=DNA
polymerase-primase complex p74 subunit
gi|511143|emb|CAA52761.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536045|emb|CAA84855.1| POL12 [Saccharomyces cerevisiae]
gi|285810299|tpg|DAA07084.1| TPA: Pol12p [Saccharomyces cerevisiae S288c]
gi|392301181|gb|EIW12270.1| Pol12p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1583516|prf||2120451C ORF YBL0415
Length = 705
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI----YSDASLPLSETRPALDQNTEMYKLRV 162
++ F GQIVA +G N + + F I Y ++ + S+ N E L+V
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSILPLPYPNSPVSTSQELQEFQANLEGSSLKV 395
>gi|151946359|gb|EDN64581.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae YJM789]
Length = 705
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 278 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 337
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI----YSDASLPLSETRPALDQNTEMYKLRV 162
++ F GQIVA +G N + + F I Y ++ + S+ N E L+V
Sbjct: 338 NELSFFLGQIVAFKGKNANGDYFTVNSILPLPYPNSPVSTSQELQEFQANLEGSSLKV 395
>gi|239781862|pdb|3FLO|A Chain A, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781865|pdb|3FLO|C Chain C, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781868|pdb|3FLO|E Chain E, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781871|pdb|3FLO|G Chain G, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
Length = 460
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T EI A+GRIV D T D LN S+ LE + GR + L L +
Sbjct: 33 LSPNDFADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQV 92
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI----YSDASLPLSETRPALDQNTEMYKLRV 162
++ F GQIVA +G N + + F I Y ++ + S+ N E L+V
Sbjct: 93 NELSFFLGQIVAFKGKNANGDYFTVNSILPLPYPNSPVSTSQELQEFQANLEGSSLKV 150
>gi|406603654|emb|CCH44807.1| hypothetical protein BN7_4376 [Wickerhamomyces ciferrii]
Length = 636
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 66 TEITAIGRIVCDTSDG---KLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
+EI +GRI+ D +LN++S+ LE G+ I L L T ++FPGQIVA
Sbjct: 237 SEIITVGRIIPDNPQVESIQLNSSSLALETSRTLGIGKRIPLDLSNLTDYSLFPGQIVAL 296
Query: 122 RGSNPSRNQFIATKI 136
RG N S + F +I
Sbjct: 297 RGKNASGDFFKINEI 311
>gi|302307213|ref|NP_983797.2| ADL299Cp [Ashbya gossypii ATCC 10895]
gi|299788891|gb|AAS51621.2| ADL299Cp [Ashbya gossypii ATCC 10895]
Length = 645
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDT-SDGKLNAASVLLEGDEVTSGGRSI 102
+G+ + +GD T+ + I +GRIV D D ++N SV +E GR I
Sbjct: 235 LGISSAELGDPTI------QSQSSIICVGRIVPDNPGDERINMESVSIETSRAAGIGRRI 288
Query: 103 SLKLPETG-VAVFPGQIVAARGSN 125
L L ++FPGQIVA RG N
Sbjct: 289 RLNLKSIKEYSLFPGQIVAMRGRN 312
>gi|68488831|ref|XP_711762.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
gi|46433085|gb|EAK92540.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
Length = 664
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 66 TEITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
++I GRIV D LN+ S+ LE ++ G+ I L L + + FPGQIV
Sbjct: 249 SDILCCGRIVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVL 308
Query: 122 RGSNPSRNQFIATK 135
+G NPS FI +
Sbjct: 309 KGKNPSGKSFIVEQ 322
>gi|238878822|gb|EEQ42460.1| hypothetical protein CAWG_00671 [Candida albicans WO-1]
Length = 664
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 66 TEITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
++I GRIV D LN+ S+ LE ++ G+ I L L + + FPGQIV
Sbjct: 249 SDILCCGRIVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVL 308
Query: 122 RGSNPSRNQFIATK 135
+G NPS FI +
Sbjct: 309 KGKNPSGKSFIVEQ 322
>gi|68488876|ref|XP_711738.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
gi|46433060|gb|EAK92516.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
Length = 664
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 66 TEITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
++I GRIV D LN+ S+ LE ++ G+ I L L + + FPGQIV
Sbjct: 249 SDILCCGRIVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVL 308
Query: 122 RGSNPSRNQFIATK 135
+G NPS FI +
Sbjct: 309 KGKNPSGKSFIVEQ 322
>gi|374107009|gb|AEY95917.1| FADL299Cp [Ashbya gossypii FDAG1]
Length = 645
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 44 IGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDT-SDGKLNAASVLLEGDEVTSGGRSI 102
+G+ + +GD T+ + I +GRIV D D ++N SV +E GR I
Sbjct: 235 LGISSAELGDPTI------QSQSSIICVGRIVPDNPGDERINMESVSIETSRAAGIGRRI 288
Query: 103 SLKLPETG-VAVFPGQIVAARGSN 125
L L ++FPGQIVA RG N
Sbjct: 289 RLNLESIKEYSLFPGQIVAMRGRN 312
>gi|190346827|gb|EDK39005.2| hypothetical protein PGUG_03103 [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 68 ITAIGRIVCDTS------DGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ GRIV D+ + LN+ S+ LE + G+ I L L + ++FPGQI
Sbjct: 1 MHCCGRIVPDSQLYDKELNQNLNSTSLFLETSRLGGIGQRIPLDLTNVSDYSLFPGQIAV 60
Query: 121 ARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKGLPL 170
+G NP+ + F+ +I SLP + + Q E Y+ +V E GL +
Sbjct: 61 LKGRNPTGSSFVVQEI---CSLPSLGSHVSSKQELEQYQEQVG-EGGLKI 106
>gi|146418818|ref|XP_001485374.1| hypothetical protein PGUG_03103 [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 68 ITAIGRIVCDTS------DGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
+ GRIV D+ + LN+ S+ LE + G+ I L L + ++FPGQI
Sbjct: 1 MHCCGRIVPDSQLYDKELNQNLNSTSLFLETSRLGGIGQRIPLDLTNVSDYSLFPGQIAV 60
Query: 121 ARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSYEKGLPL 170
+G NP+ + F+ +I SLP + + Q E Y+ +V E GL +
Sbjct: 61 LKGRNPTGSSFVVQEI---CSLPSLGSHVSSKQELEQYQEQVG-EGGLKI 106
>gi|444724504|gb|ELW65107.1| Cdc42 effector protein 2 [Tupaia chinensis]
Length = 576
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 62 FGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIV 119
F +T +G+I CD S+GKLN SV+LEGD S G I + L E ++FPGQ V
Sbjct: 65 FEHEEPVTLLGQIGCD-SNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQGV 122
>gi|410082157|ref|XP_003958657.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
gi|372465246|emb|CCF59522.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
Length = 679
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 57 LVPFLFGDTT-----EITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPET 109
L P F D T + +GRIV DT S+G LN S+ LE V+ GR + L L
Sbjct: 263 LPPSDFADPTVQSQSSVYCVGRIVPDTITSEGFLNPESLSLETSRVSGIGRRVRLDLSNI 322
Query: 110 G-VAVFPGQIVAARGSNPSRNQFIATKI 136
++F GQIV RG N + + F +I
Sbjct: 323 EETSLFAGQIVGLRGKNANGDSFSVEEI 350
>gi|412987890|emb|CCO19286.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 71 IGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLP--ETGVAVFPGQIVAARGSNPSR 128
IGR+ CD+SD + + LE +S G + L+L E ++FPGQIV G+NP+
Sbjct: 299 IGRVCCDSSDRQ----ELQLE----SSDGSRVKLELRSVENEYSLFPGQIVKCVGANPTG 350
Query: 129 NQFIATKIYSDASLPLSETRPALDQNTEM 157
F+A +I + + + Q TEM
Sbjct: 351 YCFVAKEIDCYYFKQIKQEQHQQIQKTEM 379
>gi|344228522|gb|EGV60408.1| hypothetical protein CANTEDRAFT_110389 [Candida tenuis ATCC 10573]
Length = 673
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 67 EITAIGRIVCDTSD----GKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
+I GRIV D+ LNA S+ LE + G+ + L L + + FPGQIV
Sbjct: 249 DIYCCGRIVPDSPSYDYSQSLNATSLNLETSRLAGIGQRVPLDLSQLKEYSFFPGQIVCL 308
Query: 122 RGSNPSRNQFIATKI 136
+G NP+ +QF+ ++
Sbjct: 309 KGRNPAGSQFVVQEV 323
>gi|401626719|gb|EJS44644.1| pol12p [Saccharomyces arboricola H-6]
Length = 706
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 48 TVTIGDITLLVPFLFGDTT-----EITAIGRIVCD--TSDGKLNAASVLLEGDEVTSGGR 100
T I D L P F D T EI +GRIV D T D LN S+ LE + GR
Sbjct: 270 TKIIQDHYKLSPNDFADPTIQSQSEIYTVGRIVPDSPTYDKFLNPESLALETSRMGGVGR 329
Query: 101 SISLKLPETG-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+ L L + ++ F GQIVA +G N + + F +SLP+
Sbjct: 330 RVRLDLSQINELSFFLGQIVALKGKNANGDYFTVK-----SSLPI 369
>gi|50553420|ref|XP_504121.1| YALI0E18832p [Yarrowia lipolytica]
gi|49649990|emb|CAG79716.1| YALI0E18832p [Yarrowia lipolytica CLIB122]
Length = 608
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 62 FGDTTEITAIGRIVCDTSDG-KLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIV 119
D I GRIV DT + +L ASVLLE G + L L V++ PGQ++
Sbjct: 244 LSDQNSIVCAGRIVLDTPETVRLTDASVLLETPRSRGGALRVKLNLSLLPSVSLIPGQLL 303
Query: 120 AARGSNPSRNQFIATKI 136
A +G N S +F+ +I
Sbjct: 304 ALKGVNSSGREFVVEEI 320
>gi|170089217|ref|XP_001875831.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649091|gb|EDR13333.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 579
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 67 EITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPET-----------GVAV 113
E+T IGR+ D+ + KL +++++E S G + L+L G +
Sbjct: 192 EVTIIGRLTQDSESASAKLTESTLMIESSRAISNGARVPLRLDHALRIRGSVQGAGGTGL 251
Query: 114 FPGQIVAARGSNPSRNQFIATKIYS 138
FPG IVA +G N F+AT++ S
Sbjct: 252 FPGAIVALKGKNGGGGYFLATEVLS 276
>gi|392566032|gb|EIW59208.1| DNA polymerase alpha subunit B [Trametes versicolor FP-101664 SS1]
Length = 530
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 67 EITAIGRIVCD--TSDG--KLNAASVLLEGDEVTSGGRSISLKLPET-----------GV 111
E+T +GRIV D +S G KLN AS++LE + G + L+ G
Sbjct: 131 EVTVVGRIVHDAESSSGSVKLNEASLVLESSRMMGSGARVPLRFDADVKVRRGVRNGGGQ 190
Query: 112 AVFPGQIVAARGSNPSRNQFIATKIYS 138
+FPG IVA +G N F T+I S
Sbjct: 191 GMFPGAIVALKGKNGGGGSFYVTEILS 217
>gi|395330969|gb|EJF63351.1| DNA polymerase alpha, subunit B [Dichomitus squalens LYAD-421 SS1]
Length = 605
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 67 EITAIGRIVCDTSDG----KLNAASVLLEGDEVTSGGRSISLKL-PETGV---------- 111
E+ +GR+V D KLN AS++LE + G + L+ P V
Sbjct: 206 EVIVVGRVVLDAESSAGSVKLNEASLMLESSRMMGSGARVQLRFDPNVKVRKGKQGLGGQ 265
Query: 112 AVFPGQIVAARGSNPSRNQFIATKIYS 138
+FPG IVA +G N F+AT+I S
Sbjct: 266 GLFPGAIVALKGKNGGGGAFLATEILS 292
>gi|195054929|ref|XP_001994375.1| GH16851 [Drosophila grimshawi]
gi|193892138|gb|EDV91004.1| GH16851 [Drosophila grimshawi]
Length = 603
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARGSNP 126
+ A+G I D DG L+A S LL + + + +SL + A +FPGQ+V A+G P
Sbjct: 267 LHAVGMIHSD-DDGPLDAHSALLA--VLNTDEKFLSLNFSQIKSASIFPGQVVLAKGFIP 323
Query: 127 SRNQFIATKIYSDASLPL 144
+ F+ +IY+D L L
Sbjct: 324 RGDTFVVEEIYTDRKLTL 341
>gi|195394642|ref|XP_002055951.1| GJ10668 [Drosophila virilis]
gi|194142660|gb|EDW59063.1| GJ10668 [Drosophila virilis]
Length = 600
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARGSNP 126
+ A+G I D DG L+A S LL + + + ++L + A +FPGQ+V A+G P
Sbjct: 265 LHAVGMIHSD-DDGPLDAHSALLA--VLNTDEKCLALNFSQIKSASIFPGQVVLAKGFIP 321
Query: 127 SRNQFIATKIYSDASLPL 144
+ F+ +IY+D L L
Sbjct: 322 RGDTFVVEEIYTDRKLTL 339
>gi|403415195|emb|CCM01895.1| predicted protein [Fibroporia radiculosa]
Length = 1294
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 68 ITAIGRIVCD--TSDG-KLNAASVLLEGDEVTSGGRSISLKLPET-----------GVAV 113
+T +GRIV D TS G KLN AS++LE G +SL+ +
Sbjct: 201 VTVVGRIVHDLETSGGAKLNEASLVLESSRQMGSGVRVSLRFDPALQIRQARQGVGSIGF 260
Query: 114 FPGQIVAARGSNPSRNQFIATKI 136
FPG IVA +G N F+ T+I
Sbjct: 261 FPGAIVACKGKNGGGGWFLVTEI 283
>gi|11072016|gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGD-------------------EVTSGGR-SISLKLP 107
I A+G I CD +G LN S+LL+ E TSG R + LK
Sbjct: 252 IFAVGMICCD-GEGHLNDKSILLQSSSKYPEFPYPNANKFDDCSAERTSGQRVPVDLKRL 310
Query: 108 ETGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSET 147
+ ++FPGQ+V G NPS + A+K+ S+PL+ T
Sbjct: 311 DQ-FSIFPGQVVGIEGQNPSGHYLTASKLLD--SVPLTLT 347
>gi|169858232|ref|XP_001835762.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116503212|gb|EAU86107.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 612
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 67 EITAIGRIVCD---TSDGKLNAASVLLEGDEVTSGGRSISLKLPET-----------GVA 112
E+T +GRI D + KL +S+++E + S G + L+L G
Sbjct: 210 EVTVVGRIAQDPDVMARSKLTESSMVIESSRMLSSGARVPLRLDPAIQVKGAVQGSRGYG 269
Query: 113 VFPGQIVAARGSNPSRNQFIATKIYSDASLPLSET 147
+FPGQIVA +G N F AT I + L S T
Sbjct: 270 LFPGQIVALQGKNGGGGYFYATTILAIPPLKPSPT 304
>gi|345560327|gb|EGX43452.1| hypothetical protein AOL_s00215g188 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 67 EITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARG 123
E+ +GRIV D S + N AS+LLE G + L L G A +PG VA +
Sbjct: 255 EVVVVGRIVTDVMESQKRSNEASLLLEASRGDGEGGRVRLDLSALKGYAFYPGMTVAFKA 314
Query: 124 SNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKL 160
NP+ ++ + + + + + ++P+ D E KL
Sbjct: 315 MNPTADKLLVKSVLTPPTYFGAGSKPS-DMEEEFRKL 350
>gi|195112560|ref|XP_002000840.1| GI10451 [Drosophila mojavensis]
gi|193917434|gb|EDW16301.1| GI10451 [Drosophila mojavensis]
Length = 597
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVA-VFPGQIVAARGSNP 126
+ A+G I D DG L+A S LL + + + ++L + A +FPGQ+V A+G P
Sbjct: 262 LHAVGMIHSD-DDGPLDAHSALLAV--LNTDEKCLALNFSQIKSASIFPGQVVLAKGFIP 318
Query: 127 SRNQFIATKIYSDASL 142
+ F+ +IY+D L
Sbjct: 319 RGDTFVVEEIYTDRKL 334
>gi|254568602|ref|XP_002491411.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|238031208|emb|CAY69131.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|328352078|emb|CCA38477.1| DNA polymerase subunit alpha B [Komagataella pastoris CBS 7435]
Length = 640
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 68 ITAIGRIVCDTS----DGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAAR 122
+ GRIV D+ + +LN S+ LE + G+ IS+ + + FPGQIV +
Sbjct: 244 VYCCGRIVPDSPFAPVELRLNPDSLFLETSRLGGIGQRISIDVQSLAEYSFFPGQIVGFK 303
Query: 123 GSNPSRNQFIATKIYSDASL--PLSETRPALDQNTEM 157
G NPS +FI ++ L P+S L+ T +
Sbjct: 304 GKNPSGERFIVEQVLDIPYLGAPVSNKTELLEYKTNL 340
>gi|399218427|emb|CCF75314.1| unnamed protein product [Babesia microti strain RI]
Length = 567
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET--GVAVFPGQIVAARG 123
++ GRI C+ S+ ++N ++L+EGD S G+ ++ E + +FPGQ+VA +G
Sbjct: 186 NDLCVYGRIWCE-SEIQINEHNILIEGDYSNSKGKIAQVRNIENMPCICLFPGQMVAIKG 244
Query: 124 SNPSRN---QFIATKIYSDASLPLSETRPALDQNTE 156
+ + +++A+ IY+ + RP L + E
Sbjct: 245 NAIQDDFSFRYMASNIYTG----IPAERPLLHRPKE 276
>gi|241949265|ref|XP_002417355.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
gi|223640693|emb|CAX45004.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
Length = 660
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 66 TEITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPETGV-AVFPGQIVAA 121
++I GRIV D LN+ S+ LE ++ G+ + L + + FPGQIV
Sbjct: 247 SDILCCGRIVPDNPLYDKEILNSTSLFLETSRISGIGQRVPLDISNLPTYSFFPGQIVVL 306
Query: 122 RGSNPSRNQFIATK 135
+G NPS FI +
Sbjct: 307 KGKNPSGKSFIVEQ 320
>gi|384248689|gb|EIE22172.1| DNA polymerase alpha, subunit B [Coccomyxa subellipsoidea C-169]
Length = 552
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 71 IGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGSNPSRNQ 130
+GR+VCD ++G LNA S+LLEG S G SI L +V G NPS +
Sbjct: 182 VGRVVCD-AEGHLNANSLLLEGTLKHSQGASIKL------------DVVGVLGLNPSGSC 228
Query: 131 FIATKIYSDASLPLSETRP 149
+A ++ + P + P
Sbjct: 229 LVAQRLITSLPRPFPSSTP 247
>gi|344304974|gb|EGW35206.1| DNA polymerase alpha-primase complex B subunit [Spathaspora
passalidarum NRRL Y-27907]
Length = 592
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 67 EITAIGRIVCDT-----SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVA 120
EI GRIV D+ + LN+ S+ LE V G+ + L L + + + F GQIV
Sbjct: 180 EILCCGRIVPDSPLYDKENVALNSTSLYLETSRVQGIGQRVPLDLSKLSSYSFFSGQIVI 239
Query: 121 ARGSNPSRNQFIATKIYSDASL--PLSETRPALDQNTEMYKLR 161
+G NPS FI ++ L PLS + D+ E+ +L+
Sbjct: 240 LKGRNPSGRTFIVDEVLELPQLGVPLSSS----DEIKEIQELQ 278
>gi|242373336|ref|ZP_04818910.1| pyruvate carboxylase [Staphylococcus epidermidis M23864:W1]
gi|242348699|gb|EES40301.1| pyruvate carboxylase [Staphylococcus epidermidis M23864:W1]
Length = 1153
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L+ +SV
Sbjct: 844 SNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDESSV 903
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQI 118
L EG + L PE+ V+ F G+I
Sbjct: 904 LSEGHK---------LDFPESVVSFFKGEI 924
>gi|255729866|ref|XP_002549858.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
gi|240132927|gb|EER32484.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
Length = 670
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 66 TEITAIGRIVCDT---SDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAA 121
++I GRIV D LN S+ LE ++ G+ + L + + FPGQIV
Sbjct: 254 SDILCCGRIVPDNPMYDKEILNNTSLFLETSRMSGIGQRVPLNIDNLKSYSFFPGQIVVF 313
Query: 122 RGSNPSRNQFIATKIYSDASLP 143
+G NPS FI + + SLP
Sbjct: 314 KGKNPSGKSFI---VEENMSLP 332
>gi|429966415|gb|ELA48412.1| hypothetical protein VCUG_00021 [Vavraia culicis 'floridensis']
Length = 447
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 97 SGGRSISLKLPETG-VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLS 145
S + L L E ++FPGQ+VA +G NP+ N+ I KIY LP++
Sbjct: 98 SNDTLVELNLSELDRYSLFPGQVVAIKGHNPNGNEIIVRKIYDSPVLPVN 147
>gi|426195866|gb|EKV45795.1| hypothetical protein AGABI2DRAFT_179299 [Agaricus bisporus var.
bisporus H97]
Length = 588
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 63 GDTTE--ITAIGRIV--CDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET--------- 109
G TT+ + +GRI D KL +S+ LE + SGG I+LK
Sbjct: 195 GTTTDEDVVIVGRIFSDVDVEAEKLTESSLFLESSRMLSGGARIALKFHPALVIRNNIRG 254
Query: 110 --GVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL-SETRPALDQNT 155
G+ FPG IVA +G N F+ ++ +LP+ + T P +NT
Sbjct: 255 ARGLGFFPGAIVALKGRNGGGGHFLVNEVL---TLPVPNPTTPVSGENT 300
>gi|198451445|ref|XP_001358373.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
gi|198131493|gb|EAL27512.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
Length = 609
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGV---AVFPGQIVAARGS 124
+ A+G I + DG L+A S L VT G S L L T + ++FPGQ+V A+G
Sbjct: 272 LYAVGMIHSE-DDGPLDAHSAFLA---VTDGEESSFLDLNFTRIKSASIFPGQVVLAKGF 327
Query: 125 NPSRNQFIATKIYSDASL 142
P N F+ +I+++ L
Sbjct: 328 IPKGNSFVVEEIHTERKL 345
>gi|50287459|ref|XP_446159.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525466|emb|CAG59083.1| unnamed protein product [Candida glabrata]
Length = 661
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 66 TEITAIGRIVCDT--SDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQIVAAR 122
+EI AIGR+V D+ S+G N ++ LE GR I L L ++F GQIVA +
Sbjct: 260 SEIYAIGRVVPDSALSEGFPNIDAIALETSRNQGIGRRIRLDLEHVSETSLFLGQIVAIK 319
Query: 123 GSNPSRNQFIATKIYS 138
G N + F ++ S
Sbjct: 320 GKNATGEYFKVEEVLS 335
>gi|402225765|gb|EJU05826.1| DNA polymerase alpha subunit B [Dacryopinax sp. DJM-731 SS1]
Length = 570
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 67 EITAIGRIVCDTSDG-KLNAASVLLEGDEVTSGGRSISLKLP---------ETGVAVFPG 116
++ +GRI D G KL +S+LLE + G LK + G +FPG
Sbjct: 196 DVVVVGRICSDADTGAKLTESSLLLESSRMGGSGVRTPLKFEHGFSVRGKNDNGFGLFPG 255
Query: 117 QIVAARGSNPSRNQFIATK 135
QIVA +G N F A++
Sbjct: 256 QIVALKGKNGGGGWFSASE 274
>gi|47225240|emb|CAG09740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG-VAVFPGQ 117
IT +G+I CD S GKLNA SVLLE GG+ + + L E ++FPGQ
Sbjct: 22 ITVLGQICCD-SKGKLNAQSVLLEAGP-DQGGQQVPVGLSELKEYSLFPGQ 70
>gi|66359634|ref|XP_626995.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
gi|46228445|gb|EAK89315.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
Length = 621
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG--VAVFPGQIVAARGS 124
I +G I CD ++G LN SV+L G +S G LKL A++PGQ+VA G+
Sbjct: 229 IVTLGAIGCD-NEGNLNEQSVILLGTRASSSGNISQLKLGNVNGDFALYPGQVVAILGN 286
>gi|379795485|ref|YP_005325483.1| putative pyruvate carboxylase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872475|emb|CCE58814.1| putative pyruvate carboxylase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 1150
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L+ SV
Sbjct: 840 SNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSV 899
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQI 118
+ EG + L PE+ V+ F G+I
Sbjct: 900 ISEGHK---------LDFPESVVSFFKGEI 920
>gi|314933311|ref|ZP_07840676.1| pyruvate carboxylase [Staphylococcus caprae C87]
gi|313653461|gb|EFS17218.1| pyruvate carboxylase [Staphylococcus caprae C87]
Length = 1153
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L+ +SV
Sbjct: 844 SNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDESSV 903
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQI 118
L +G L PE+ V+ F G+I
Sbjct: 904 LSDG---------YKLDFPESVVSFFKGEI 924
>gi|409078958|gb|EKM79320.1| hypothetical protein AGABI1DRAFT_91899 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1199
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 63 GDTTE--ITAIGRIV--CDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET--------- 109
G TT+ + +GRI D KL +S+ LE + SGG I+LK
Sbjct: 897 GTTTDEDVVIVGRIFSDVDVEAEKLTESSLFLESSRMLSGGARIALKFHPALVIRNNIRG 956
Query: 110 --GVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL-SETRPALDQNT 155
G+ FPG IVA +G N F+ ++ +LP+ + T P +NT
Sbjct: 957 ARGLGFFPGAIVALKGRNGGGGYFLVNEVL---TLPIPNPTAPVSGENT 1002
>gi|308497134|ref|XP_003110754.1| CRE-DIV-1 protein [Caenorhabditis remanei]
gi|308242634|gb|EFO86586.1| CRE-DIV-1 protein [Caenorhabditis remanei]
Length = 581
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 72 GRIVCD-TSDG-KLNAASV-LLEGDEVTSGGRSISLKLPE--TGVAVFPGQIVAARGSNP 126
G++V D T D K SV L+ DE G I L L + V +FPGQI+A RG+N
Sbjct: 235 GQVVHDETKDNEKFGENSVALMINDE---DGTMIRLDLSKITEDVTLFPGQIIAVRGTNE 291
Query: 127 SRNQFIATKIYSDASLPLS 145
+ + KI++ +SLP+S
Sbjct: 292 TGEELQVDKIFTPSSLPVS 310
>gi|260945677|ref|XP_002617136.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
gi|238848990|gb|EEQ38454.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 18/120 (15%)
Query: 39 QFNAIIGLGTVTIGDITLLVPFLFGDTTEITAIGRIVCDTSD------GKLNAASVLLEG 92
QF A I + G+ + ++I GRIV D+ LN S+ LE
Sbjct: 206 QFQAQISDSDLQFGNPCM------SSQSDIVCCGRIVPDSPMYDSMVFQNLNDKSLYLET 259
Query: 93 DEVTSGGRSISLKLPETG-VAVFPGQIVAARGSNPSRNQFIATKIYS-----DASLPLSE 146
+ G+ I L + + FPGQIV +G NP+ F+ ++ S ++ PLSE
Sbjct: 260 SRLGGIGQRIPLDISNLDEYSFFPGQIVGLKGRNPTGRTFVVHEVLSLPPLGQSASPLSE 319
>gi|417645292|ref|ZP_12295208.1| pyruvate carboxylase [Staphylococcus warneri VCU121]
gi|445060009|ref|YP_007385413.1| pyruvate carboxylase [Staphylococcus warneri SG1]
gi|330683939|gb|EGG95705.1| pyruvate carboxylase [Staphylococcus epidermidis VCU121]
gi|443426066|gb|AGC90969.1| pyruvate carboxylase [Staphylococcus warneri SG1]
Length = 1148
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEG 92
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L L
Sbjct: 840 SNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMA---LFMVQNDLNE 896
Query: 93 DEVTSGGRSISLKLPETGVAVFPGQI 118
D+V + G L PE+ V+ F G+I
Sbjct: 897 DDVINQGH--KLDFPESVVSFFKGEI 920
>gi|223043834|ref|ZP_03613876.1| pyruvate carboxylase [Staphylococcus capitis SK14]
gi|222442738|gb|EEE48841.1| pyruvate carboxylase [Staphylococcus capitis SK14]
Length = 1149
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L+ +SV
Sbjct: 840 SNLSQQAKSLGLGGRFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDESSV 899
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQI 118
L +G L PE+ V+ F G+I
Sbjct: 900 LSDG---------YKLDFPESVVSFFKGEI 920
>gi|417907707|ref|ZP_12551478.1| pyruvate carboxylase [Staphylococcus capitis VCU116]
gi|341595736|gb|EGS38379.1| pyruvate carboxylase [Staphylococcus capitis VCU116]
Length = 1149
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNLSQ +GLG + D+ V FLFGD ++T ++V D + L+ +SV
Sbjct: 840 SNLSQQAKSLGLGGRFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDESSV 899
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQI 118
L +G L PE+ V+ F G+I
Sbjct: 900 LSDG---------YKLDFPESVVSFFKGEI 920
>gi|388579274|gb|EIM19600.1| DNA polymerase alpha, subunit B [Wallemia sebi CBS 633.66]
Length = 560
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 22/128 (17%)
Query: 49 VTIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE 108
+ IGD ++ + ++ IGRI +T KL+ S++LE + G + L+
Sbjct: 141 IEIGDPGMM------NQSQTICIGRICKETDITKLDEDSIILETSKSLGSGARVPLRFSN 194
Query: 109 T-----------GVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEM 157
G+ +FPG+IV GSN F +I++ L +T + E+
Sbjct: 195 ECKVRGVPKGSGGIRLFPGRIVGVLGSNRGAGYFGVEEIFTMPPLGTVKT-----HSQEL 249
Query: 158 YKLRVSYE 165
Y ++ S E
Sbjct: 250 YDMQHSTE 257
>gi|340355128|ref|ZP_08677820.1| pyruvate carboxylase [Sporosarcina newyorkensis 2681]
gi|339622568|gb|EGQ27083.1| pyruvate carboxylase [Sporosarcina newyorkensis 2681]
Length = 1148
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 35 SNLSQFNAIIGLGT--VTIGDITLLVPFLFGDTTEITAIGRIVCDTS----DGKLNAASV 88
SNL Q +GLG + + V FLFGD ++T ++V D + LN SV
Sbjct: 841 SNLQQQAKAVGLGERWEEVKKMYSRVNFLFGDIVKVTPSSKVVGDMALFMVQNDLNEHSV 900
Query: 89 LLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETR 148
+ +G S+ PE+ + F G I G P Q + K ++ E
Sbjct: 901 ISKGQ---------SIDFPESVIEFFEGSIGQPYGGFPKELQEVILKGREAITVRPGELL 951
Query: 149 PALDQNTEMYKLRVSYEKGLPLADYLVNVFEKSYNSAFITTVADF 193
++ + +L EK + D L V FI T F
Sbjct: 952 EPVNFEEVLSELTEKMEKPATMHDALAYVLYPKVFEEFIETRKQF 996
>gi|67607376|ref|XP_666810.1| DNA polymerase alpha subunit [Cryptosporidium hominis TU502]
gi|54657875|gb|EAL36583.1| DNA polymerase alpha subunit [Cryptosporidium hominis]
Length = 621
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETG--VAVFPGQIVAARGS 124
+ +G I CD ++G LN SV+L G +S G LKL A++PGQ+VA G+
Sbjct: 229 VVTLGAIGCD-NEGNLNEQSVILLGTTASSSGNISQLKLGNVNGDFALYPGQVVAILGN 286
>gi|313224814|emb|CBY20606.1| unnamed protein product [Oikopleura dioica]
Length = 527
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 68 ITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE-TGVAVFPGQIVAARGSNP 126
IT G I+C+ S G EG + G + L++ E G ++FPG I A G N
Sbjct: 209 ITVCGMIICEGSKGA--------EGVYLLRDGEQVQLEISELEGNSIFPGMICAVEGVNL 260
Query: 127 SRNQFIATKIY 137
+ + +KIY
Sbjct: 261 TGKLIVVSKIY 271
>gi|387792399|ref|YP_006257464.1| pyruvate carboxylase [Solitalea canadensis DSM 3403]
gi|379655232|gb|AFD08288.1| pyruvate carboxylase [Solitalea canadensis DSM 3403]
Length = 1146
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 35 SNLSQFNAIIGLGT--VTIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEG 92
SNL +GLG I + V LFGD ++T ++V D + + S L
Sbjct: 840 SNLKGQAIALGLGERFEMIKERYAEVNELFGDIVKVTPSSKVVGDMAQFMV---SNNLTK 896
Query: 93 DEVTSGGRSISLKLPETGVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALD 152
D++ + G SIS PE+ + F G+I G P++ Q I K S ++ PA++
Sbjct: 897 DDILTKGESISF--PESVMQFFLGEIGQPAGGFPAQLQKIVLKDKQPYSDRPNKHLPAIN 954
Query: 153 QNTEMYKLRVSYEKGLPLADYLVNVF 178
+ E+ + + L D+L F
Sbjct: 955 FDKELEAFKNQFGHDLQFTDFLSYKF 980
>gi|404418321|ref|ZP_11000088.1| pyruvate carboxylase [Staphylococcus arlettae CVD059]
gi|403488914|gb|EJY94492.1| pyruvate carboxylase [Staphylococcus arlettae CVD059]
Length = 1151
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 35 SNLSQFNAIIGLGTV--TIGDITLLVPFLFGDTTEITAIGRIVCDTSDGKLNAASVLLEG 92
SNL Q +GLG + D+ V FLFGD ++T ++V D + L L+
Sbjct: 840 SNLHQQAKSLGLGNRYNEVKDMYRRVNFLFGDIVKVTPSSKVVGDMA---LYMVQNDLDE 896
Query: 93 DEVTSGGRSISLKLPETGVAVFPGQI 118
D V G L PE+ V+ F G+I
Sbjct: 897 DSVIKDGH--KLDFPESVVSFFKGEI 920
>gi|341878849|gb|EGT34784.1| CBN-DIV-1 protein [Caenorhabditis brenneri]
Length = 579
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 72 GRIVCDTS--DGKLNAASV-LLEGDEVTSGGRSISLKLPET--GVAVFPGQIVAARGSNP 126
G+++ D + + K SV L+ DE G + L L + V +FPGQI+A RG N
Sbjct: 233 GQVIHDETKENEKFGEHSVALMTNDE---DGTMVRLDLSKVTDDVTLFPGQIIAVRGINE 289
Query: 127 SRNQFIATKIYSDASLPL 144
S F +IY+ +LP+
Sbjct: 290 SGEDFQVDRIYTPTALPV 307
>gi|324508966|gb|ADY43781.1| DNA polymerase alpha subunit B [Ascaris suum]
Length = 607
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 72 GRIVCDTSDGKLNAASVLLEGDEVTSGGRSISL-KLPETGVAVFPGQIVAARGSNPSRNQ 130
G+IV D + +L A + D+ + + L KLPE ++FPG++VA +G+N +
Sbjct: 257 GQIV-DENGERLEEAGCCIRSDDEEATMVHLDLSKLPE--FSLFPGKVVALKGTNEDGST 313
Query: 131 FIATKIYSDASLPLSET--RPALDQ 153
F T+++ A + +S +P +D+
Sbjct: 314 FTPTELFEPAKMQISPVIRQPGIDR 338
>gi|389744686|gb|EIM85868.1| DNA polymerase alpha subunit B [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 16/88 (18%)
Query: 67 EITAIGRIVCD----TSD-GKLNAASVLLEGDEVTSGGRSISLKLPET-----------G 110
+ +GRI D TSD KLN AS+ LE G + LK
Sbjct: 211 DCVVVGRITLDSESATSDSAKLNEASLCLESSRSMGSGGRVPLKFDSNVKVRGGPKDVGA 270
Query: 111 VAVFPGQIVAARGSNPSRNQFIATKIYS 138
V +FPG IVA +G N +F ++I +
Sbjct: 271 VGLFPGAIVALKGKNGGGGRFTVSEILT 298
>gi|242083288|ref|XP_002442069.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
gi|241942762|gb|EES15907.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
Length = 157
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 112 AVFPGQIVAARGSNPSRNQFIATK-IYS-----DASLPLSETRPALDQNT 155
++FPGQ+V G NPS + F+A+K IYS DA LP S + A+D +
Sbjct: 30 SLFPGQVVGIEGHNPSGHCFVASKLIYSIPVSVDAQLP-SANKQAIDNES 78
>gi|630708|pir||S43564 R01H10.1 protein (clone R01H10) - Caenorhabditis elegans
Length = 475
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 111 VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLS 145
+ +FPGQI+A RG+N + + KI+ A+LP++
Sbjct: 279 ITLFPGQIIAVRGTNETGEELQVDKIFQPAALPVN 313
>gi|17554432|ref|NP_499268.1| Protein DIV-1 [Caenorhabditis elegans]
gi|21431778|sp|Q21625.3|DPOA2_CAEEL RecName: Full=DNA polymerase alpha subunit B; AltName:
Full=Division delayed protein 1
gi|18136205|emb|CAA83467.2| Protein DIV-1 [Caenorhabditis elegans]
Length = 581
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 111 VAVFPGQIVAARGSNPSRNQFIATKIYSDASLPLS 145
+ +FPGQI+A RG+N + + KI+ A+LP++
Sbjct: 279 ITLFPGQIIAVRGTNETGEELQVDKIFQPAALPVN 313
>gi|332249812|ref|XP_003274050.1| PREDICTED: DNA polymerase alpha subunit B [Nomascus leucogenys]
Length = 582
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 110 GVAVFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
G+++FPGQ+V G N + + +ATK+Y LP
Sbjct: 279 GISLFPGQVVIMEGINTTGRKLVATKLYEGVPLPF 313
>gi|449549021|gb|EMD39987.1| hypothetical protein CERSUDRAFT_103890 [Ceriporiopsis subvermispora
B]
Length = 589
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 67 EITAIGRIVCDTSD----GKLNAASVLLEGDEVTSGGRSISLKLPE-----------TGV 111
++ +GR+ D+ KLN AS+ E + G + ++ + V
Sbjct: 205 DVVVVGRVTFDSESISGSVKLNEASLAFESSRMMGAGARVPIRFDPNVKIRGGKAGLSTV 264
Query: 112 AVFPGQIVAARGSNPSRNQFIATKIYSDASLPL 144
+FPG IVA +G N F+AT+I S P+
Sbjct: 265 GLFPGAIVALKGKNGGGGYFLATEIISLPPAPV 297
>gi|328857937|gb|EGG07051.1| hypothetical protein MELLADRAFT_77651 [Melampsora larici-populina
98AG31]
Length = 636
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPET-----------GVAVFP 115
+I A+GRI +T D K++ + LE + GR + LK E GV +FP
Sbjct: 230 DIWAVGRICAETQDTKVSDNACWLETSRLGGYGRRVWLKWDEALKVHGVGSGEGGVGLFP 289
Query: 116 GQIVAARGSNPSRNQFIATKIYSDASLPLSETRPALDQNTEMYKLRVSY 164
G I+ +G N F +I T P +D T + V Y
Sbjct: 290 GAIIGVKGRNGGGTYFSVQEIL---------TMPPVDPPTTLPTKLVEY 329
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,179,997,335
Number of Sequences: 23463169
Number of extensions: 125403187
Number of successful extensions: 310858
Number of sequences better than 100.0: 319
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 310480
Number of HSP's gapped (non-prelim): 323
length of query: 203
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 68
effective length of database: 9,191,667,552
effective search space: 625033393536
effective search space used: 625033393536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)