Query psy145
Match_columns 203
No_of_seqs 117 out of 185
Neff 4.6
Searched_HMMs 13730
Date Fri Aug 16 21:22:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy145.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/145hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dy1a1 b.43.3.1 (A:275-377) E 69.8 1.8 0.00013 30.1 3.4 65 67-135 24-92 (103)
2 d1e32a1 b.52.2.3 (A:21-106) Me 68.1 1.3 9.5E-05 30.5 2.3 27 101-127 18-45 (86)
3 d1cz5a1 b.52.2.3 (A:1-91) N-te 64.9 0.95 6.9E-05 31.7 1.0 26 100-125 22-48 (91)
4 d1j6qa_ b.40.9.1 (A:) Heme cha 63.4 12 0.0009 26.0 6.9 71 63-138 24-98 (100)
5 d2pi2e1 b.40.4.3 (E:3-117) Rep 57.5 27 0.002 24.4 8.7 67 65-140 20-86 (115)
6 d1g6ha_ c.37.1.12 (A:) MJ1267 51.0 2.4 0.00018 33.7 1.3 22 109-130 23-44 (254)
7 d1q77a_ c.26.2.4 (A:) Hypothet 50.8 6.3 0.00046 26.3 3.4 32 159-190 87-118 (138)
8 d1sgwa_ c.37.1.12 (A:) Putativ 46.9 2.5 0.00018 32.3 0.8 22 109-130 20-41 (200)
9 d1sr3a_ b.40.9.1 (A:) Heme cha 46.2 43 0.0032 23.4 8.9 69 66-139 29-100 (114)
10 d1tq8a_ c.26.2.4 (A:) Hypothet 46.1 9.4 0.00069 25.8 3.8 31 158-188 84-114 (147)
11 d1ii7a_ d.159.1.4 (A:) Mre11 { 46.1 6.3 0.00046 29.8 3.0 26 169-195 28-53 (333)
12 d1vpla_ c.37.1.12 (A:) Putativ 43.5 3.7 0.00027 32.4 1.3 21 110-130 22-42 (238)
13 d1r0wa_ c.37.1.12 (A:) Cystic 42.9 4 0.00029 33.0 1.4 21 110-130 56-76 (281)
14 d1e1oa1 b.40.4.1 (A:11-153) Ly 41.2 40 0.0029 24.2 6.9 65 65-136 54-132 (143)
15 d2bv3a1 b.43.3.1 (A:283-403) E 41.0 14 0.001 26.0 4.1 61 66-134 40-110 (121)
16 d2awna2 c.37.1.12 (A:4-235) Ma 40.9 4.3 0.00031 32.2 1.3 21 110-130 20-40 (232)
17 d1jj7a_ c.37.1.12 (A:) Peptide 40.6 4.2 0.00031 32.3 1.2 25 110-134 34-58 (251)
18 d1mv5a_ c.37.1.12 (A:) Multidr 38.8 4.5 0.00033 32.0 1.0 22 110-131 22-43 (242)
19 d1ji0a_ c.37.1.12 (A:) Branche 38.1 4.7 0.00035 31.8 1.1 22 109-130 25-46 (240)
20 d1a04a2 c.23.1.1 (A:5-142) Nit 38.1 9.6 0.0007 26.6 2.7 31 171-201 64-102 (138)
21 d2pmka1 c.37.1.12 (A:467-707) 36.9 5.1 0.00037 31.7 1.1 24 110-133 23-46 (241)
22 d2hyda1 c.37.1.12 (A:324-578) 36.5 5.4 0.00039 31.9 1.2 24 110-133 38-61 (255)
23 d1n0ua1 b.43.3.1 (A:344-481) E 35.0 42 0.0031 23.8 6.1 16 111-126 103-118 (138)
24 d1ulea_ b.29.1.3 (A:) Galectin 34.9 13 0.00097 27.5 3.2 26 111-136 15-42 (150)
25 d1a78a_ b.29.1.3 (A:) Galectin 34.8 13 0.00098 26.6 3.2 27 109-135 8-35 (134)
26 d1l7vc_ c.37.1.12 (C:) ABC tra 34.5 4.1 0.0003 31.8 0.1 26 109-134 18-43 (231)
27 d1eova1 b.40.4.1 (A:71-204) As 33.1 31 0.0023 24.2 5.0 56 64-124 35-101 (134)
28 d1hlca_ b.29.1.3 (A:) S-lac le 32.8 20 0.0014 25.4 3.8 29 110-139 6-35 (129)
29 d1v43a3 c.37.1.12 (A:7-245) Hy 32.3 7.1 0.00052 31.0 1.3 25 110-134 26-50 (239)
30 d1g2912 c.37.1.12 (1:1-240) Ma 32.3 6.7 0.00049 31.2 1.1 21 110-130 23-43 (240)
31 d1qmja_ b.29.1.3 (A:) Galectin 31.3 15 0.0011 26.2 2.9 26 109-134 6-32 (132)
32 d1tbge_ a.137.3.1 (E:) Transdu 31.1 3.7 0.00027 27.3 -0.6 23 170-192 37-59 (68)
33 d1ccwa_ c.23.6.1 (A:) Glutamat 30.8 17 0.0012 26.0 3.1 35 159-194 31-67 (137)
34 d2z3va1 c.26.2.4 (A:2-136) Hyp 30.4 22 0.0016 23.5 3.6 31 159-189 76-106 (135)
35 d1mjha_ c.26.2.4 (A:) "Hypothe 30.3 19 0.0014 24.7 3.2 31 159-189 96-126 (160)
36 d1l2ta_ c.37.1.12 (A:) MJ0796 29.0 8.5 0.00062 30.3 1.2 22 109-130 24-45 (230)
37 d2ez9a2 c.36.1.5 (A:9-182) Pyr 27.7 39 0.0029 24.6 4.9 44 159-203 67-115 (174)
38 d3b60a1 c.37.1.12 (A:329-581) 27.2 11 0.00078 29.8 1.5 25 110-134 35-59 (253)
39 d1v1qa_ b.40.4.3 (A:) Primosom 25.7 43 0.0031 22.8 4.5 63 61-124 2-81 (111)
40 d3d31a2 c.37.1.12 (A:1-229) Su 24.1 7.4 0.00054 30.7 -0.1 21 110-130 20-40 (229)
41 d3dhwc1 c.37.1.12 (C:1-240) Me 23.9 13 0.00096 29.3 1.5 21 110-130 25-45 (240)
42 d2djia2 c.36.1.5 (A:3-186) Pyr 23.9 49 0.0036 24.3 4.8 42 162-203 72-116 (184)
43 d1b0ua_ c.37.1.12 (A:) ATP-bin 22.9 13 0.00096 29.4 1.3 21 110-130 22-42 (258)
44 d3bula2 c.23.6.1 (A:741-896) M 22.7 41 0.003 24.4 4.1 34 159-193 34-69 (156)
45 d2gala_ b.29.1.3 (A:) Galectin 22.0 37 0.0027 23.8 3.6 24 112-135 10-34 (133)
46 d1lkta_ b.90.1.1 (A:) Head-bin 21.4 22 0.0016 25.1 2.1 61 69-134 26-88 (104)
47 d2gm3a1 c.26.2.4 (A:5-175) Put 20.6 44 0.0032 23.2 3.8 32 159-190 98-129 (171)
48 d1gg2g_ a.137.3.1 (G:) Transdu 20.5 5 0.00037 25.3 -1.5 23 170-192 27-49 (54)
No 1
>d2dy1a1 b.43.3.1 (A:275-377) Elongation factor G (EF-G), domain II {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=69.81 E-value=1.8 Score=30.10 Aligned_cols=65 Identities=9% Similarity=-0.042 Sum_probs=34.4
Q ss_pred cEEEEEEEeeCCCCCCCCcceeEEEeeccCCCceEEEeecCC--CcceecCCcEEEEEeecC--CCCeEEEee
Q psy145 67 EITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPE--TGVAVFPGQIVAARGSNP--SRNQFIATK 135 (203)
Q Consensus 67 ~v~vvGRI~~Ds~egkLn~~Sv~LEgsr~~g~G~rV~Ldls~--~~~SLFPGQIVavkG~N~--~G~~fvV~e 135 (203)
-.++++||.+ |.|...+-+.-.....-..+-....-.+ .-=++.+|+||++.|... .|+++.-.+
T Consensus 24 G~i~~~RV~s----G~l~~g~~v~~~~~~~~~~~~~~~~~~~~~~v~~~~aGdI~~v~g~~~~~iGDTl~~~~ 92 (103)
T d2dy1a1 24 GQVAYLRLYR----GRLKPGDSLQSEAGQVRLPHLYVPMGKDLLEVEEAEAGFVLGVPKAEGLHRGMVLWQGE 92 (103)
T ss_dssp EEEEEEEEEE----SEECTTEEEBCTTSCEEESSEEEEETTEEEEESCEETTCEEEESSCTTCCTTCEEESSS
T ss_pred CEEEEEEEec----cccCCCCEEEEeecccccceeeeeecCcceecCEecCCCEEEEeCCCCCccCCEEcCCC
Confidence 4578999996 5555555432111110001111111111 223689999999998643 688876544
No 2
>d1e32a1 b.52.2.3 (A:21-106) Membrane fusion ATPase p97 N-terminal domain , P97-Nn {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.14 E-value=1.3 Score=30.51 Aligned_cols=27 Identities=26% Similarity=0.511 Sum_probs=23.9
Q ss_pred EEEeecCC-CcceecCCcEEEEEeecCC
Q psy145 101 SISLKLPE-TGVAVFPGQIVAARGSNPS 127 (203)
Q Consensus 101 rV~Ldls~-~~~SLFPGQIVavkG~N~~ 127 (203)
-++|+-.. +...||||.+|-++|...+
T Consensus 18 iarl~p~~m~~Lgl~~GD~V~I~Gkr~t 45 (86)
T d1e32a1 18 VVSLSQPKMDELQLFRGDTVLLKGKKRR 45 (86)
T ss_dssp EEEECHHHHHHTTCCTTCEEEEECSTTC
T ss_pred EEEECHHHHHHcCCCCCCEEEEEcCCce
Confidence 68888888 9999999999999998754
No 3
>d1cz5a1 b.52.2.3 (A:1-91) N-terminal domain of VAT-N, VAT-Nn {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=64.86 E-value=0.95 Score=31.71 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=22.5
Q ss_pred eEEEeecCC-CcceecCCcEEEEEeec
Q psy145 100 RSISLKLPE-TGVAVFPGQIVAARGSN 125 (203)
Q Consensus 100 ~rV~Ldls~-~~~SLFPGQIVavkG~N 125 (203)
..++|+-+. +.+.||||.+|-++|..
T Consensus 22 giari~~~~m~~Lgl~~GD~V~I~Gkr 48 (91)
T d1cz5a1 22 SRVRLDESSRRLLDAEIGDVVEIEKVR 48 (91)
T ss_dssp SEEEECHHHHHTTSCCTTCEEEEESSS
T ss_pred cEEEECHHHHHHcCCCCCCEEEEEcCc
Confidence 347888888 99999999999999954
No 4
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=63.45 E-value=12 Score=25.97 Aligned_cols=71 Identities=18% Similarity=0.202 Sum_probs=47.6
Q ss_pred CccccEEEEEEEeeCCCCCCCCcce--eEEEeeccCCCceEEEeecCC--CcceecCCcEEEEEeecCCCCeEEEeeccc
Q psy145 63 GDTTEITAIGRIVCDTSDGKLNAAS--VLLEGDEVTSGGRSISLKLPE--TGVAVFPGQIVAARGSNPSRNQFIATKIYS 138 (203)
Q Consensus 63 ~sq~~v~vvGRI~~Ds~egkLn~~S--v~LEgsr~~g~G~rV~Ldls~--~~~SLFPGQIVavkG~N~~G~~fvV~eI~~ 138 (203)
.....+.+=|.|..+| =.+ ++++ +...-.+ +.+..++...++ +. -+=.||=|+++|+-..++.|.|++|+.
T Consensus 24 ~~~~~iRvGG~V~~gS-i~~-~~~~~~~~F~itD--~~~~~i~V~Y~G~lPd-lF~eg~gVVveG~~~~~g~F~A~~vla 98 (100)
T d1j6qa_ 24 EAGQRIRVGGMVTVGS-MVR-DPNSLHVQFAVHD--SLGGEILVTYDDLLPD-LFREGQGIVAQGVLGEDGKLAATEVLA 98 (100)
T ss_dssp CTTCEEEEEEEECTTC-CEE-CTTSSCEEEEEEC--TTCCCEEEEECSCCTT-SCCSSSEEEEEEEECSTTSEEEEEEEC
T ss_pred cCCCEEEEeeEEeeeE-EEe-cCCccEEEEEEcC--CceeEEEEEeCCCCCc-hhcCCCeEEEEEEECCCCEEEEEEEEe
Confidence 3456799999998776 111 1111 2222221 225679998888 44 355899999999876677999999975
No 5
>d2pi2e1 b.40.4.3 (E:3-117) Replication protein A 14 KDa (RPA14) subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.46 E-value=27 Score=24.39 Aligned_cols=67 Identities=18% Similarity=0.224 Sum_probs=49.6
Q ss_pred cccEEEEEEEeeCCCCCCCCcceeEEEeeccCCCceEEEeecCCCcceecCCcEEEEEeecCCCCeEEEeecccCC
Q psy145 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLPETGVAVFPGQIVAARGSNPSRNQFIATKIYSDA 140 (203)
Q Consensus 65 q~~v~vvGRI~~Ds~egkLn~~Sv~LEgsr~~g~G~rV~Ldls~~~~SLFPGQIVavkG~N~~G~~fvV~eI~~~p 140 (203)
-..|.++||+..-.++|+ ++.+.++ .|..|.+.|.. .....+++.|=+.|+=..+..+.+.+.....
T Consensus 20 Gk~V~ivGkV~~v~~~g~----~~~~~s~----D~~~V~v~l~~-~~~~~~~~~vEViG~V~~~~sI~~~~~~~fg 86 (115)
T d2pi2e1 20 DKPVCFVGRLEKIHPTGK----MFILSDG----EGKNGTIELME-PLDEEISGIVEVVGRVTAKATILCTSYVQFK 86 (115)
T ss_dssp TCEEEEEEEEEEECTTSS----EEEEECT----TSCEEEEECSS-CCSSCCCSEEEEEEEECTTSCEEEEEEEECC
T ss_pred CCeEEEEEEEEEEcCCCC----EEEEEcC----CCCEEEEEeCC-CCCCccCCeEEEEEEECCCCcEEEEEEEEcC
Confidence 358999999986332443 5666554 47899999887 3445789999999986667788888887775
No 6
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=50.97 E-value=2.4 Score=33.73 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=19.2
Q ss_pred CcceecCCcEEEEEeecCCCCe
Q psy145 109 TGVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~N~~G~~ 130 (203)
=++++-||+||++-|.|..|.+
T Consensus 23 vs~~v~~Gei~~liG~nGaGKS 44 (254)
T d1g6ha_ 23 VSISVNKGDVTLIIGPNGSGKS 44 (254)
T ss_dssp ECCEEETTCEEEEECSTTSSHH
T ss_pred eEEEECCCCEEEEECCCCCcHH
Confidence 3589999999999999998853
No 7
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}
Probab=50.78 E-value=6.3 Score=26.34 Aligned_cols=32 Identities=19% Similarity=0.057 Sum_probs=28.0
Q ss_pred cceEEEEcCcChHHHHHHHHhcCCCeEEEeee
Q psy145 159 KLRVSYEKGLPLADYLVNVFEKSYNSAFITTV 190 (203)
Q Consensus 159 ~l~i~~A~GPpL~DLL~~v~~~~PdvLvlt~~ 190 (203)
.....+..|+|...+++++.++.+|.+|+.+.
T Consensus 87 ~~~~~v~~G~~~~~I~~~a~~~~~DLIV~Gs~ 118 (138)
T d1q77a_ 87 IPGVEYRIGPLSEEVKKFVEGKGYELVVWACY 118 (138)
T ss_dssp CCCEEEECSCHHHHHHHHHTTSCCSEEEECSC
T ss_pred eEEEeeecchhHHHHHHhhhhccCCEEEEecC
Confidence 45777889999999999999999999998653
No 8
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=46.94 E-value=2.5 Score=32.32 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=19.0
Q ss_pred CcceecCCcEEEEEeecCCCCe
Q psy145 109 TGVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~N~~G~~ 130 (203)
=+|++=+|++||+-|.|..|.+
T Consensus 20 is~~i~~Gei~~l~G~NGsGKS 41 (200)
T d1sgwa_ 20 ITMTIEKGNVVNFHGPNGIGKT 41 (200)
T ss_dssp EEEEEETTCCEEEECCTTSSHH
T ss_pred eEEEEcCCCEEEEECCCCChHH
Confidence 4688999999999999988843
No 9
>d1sr3a_ b.40.9.1 (A:) Heme chaperone CcmE {Escherichia coli [TaxId: 562]}
Probab=46.24 E-value=43 Score=23.43 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=44.1
Q ss_pred ccEEEEEEEeeCCCCCCC-CcceeEEEeeccCCCceEEEeecCC--CcceecCCcEEEEEeecCCCCeEEEeecccC
Q psy145 66 TEITAIGRIVCDTSDGKL-NAASVLLEGDEVTSGGRSISLKLPE--TGVAVFPGQIVAARGSNPSRNQFIATKIYSD 139 (203)
Q Consensus 66 ~~v~vvGRI~~Ds~egkL-n~~Sv~LEgsr~~g~G~rV~Ldls~--~~~SLFPGQIVavkG~N~~G~~fvV~eI~~~ 139 (203)
..+.+=|.|...| =.+- +...+...-.+ .+..|+...++ +.. |=.||=|+++|+--.|+.|.+++|+.-
T Consensus 29 ~~iRvgG~V~~gS-i~~~~~~~~~~F~itD---~~~~i~V~Y~GilPdl-F~eg~~VVveG~~~~~~~f~A~~vlaK 100 (114)
T d1sr3a_ 29 QRLRVGGMVMPGS-VQRDPNSLKVTFTIYD---AEGSVDVSYEGILPDL-FREGQGVVVQGELEKGNHILAKEVLAK 100 (114)
T ss_dssp SEEEEEEEECTTT-CEECSSSSEEEEEEEC---SSCEEEEEEESCCCTT-CCTTSEEEEEEEECSSSEEEESSCBCC
T ss_pred cEEEEeeEEEEeE-EEeecCcceEEEEEcc---CCcEEEEEecCCCChh-hcCCCeEEEEEEECCCCEEEEEEEEec
Confidence 4588888888665 1111 11122233332 24578888777 332 338999999998766789999999753
No 10
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=46.14 E-value=9.4 Score=25.83 Aligned_cols=31 Identities=10% Similarity=0.017 Sum_probs=27.8
Q ss_pred ccceEEEEcCcChHHHHHHHHhcCCCeEEEe
Q psy145 158 YKLRVSYEKGLPLADYLVNVFEKSYNSAFIT 188 (203)
Q Consensus 158 ~~l~i~~A~GPpL~DLL~~v~~~~PdvLvlt 188 (203)
.+..+.+..|++...+++++.+..+|.+|+-
T Consensus 84 ~~~~~~~~~G~~~~~i~~~a~~~~~dlIv~g 114 (147)
T d1tq8a_ 84 KNVEERPIVGAPVDALVNLADEEKADLLVVG 114 (147)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHTTCSEEEEE
T ss_pred CcEEEEEEecChHHHHHHhhhccceeEEEec
Confidence 3578899999999999999999999998874
No 11
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=46.07 E-value=6.3 Score=29.78 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=21.6
Q ss_pred ChHHHHHHHHhcCCCeEEEeeehhhhc
Q psy145 169 PLADYLVNVFEKSYNSAFITTVADFHR 195 (203)
Q Consensus 169 pL~DLL~~v~~~~PdvLvlt~~~~~~~ 195 (203)
.+..+++.+++++||.+|+||-- ||+
T Consensus 28 ~l~~iv~~a~~~~~D~vli~GDl-fd~ 53 (333)
T d1ii7a_ 28 AFKNALEIAVQENVDFILIAGDL-FHS 53 (333)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCS-BSS
T ss_pred HHHHHHHHHHHcCCCEEEECCCC-CCC
Confidence 47789999999999999999965 443
No 12
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=43.46 E-value=3.7 Score=32.43 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=18.8
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
+|++-||+|+++-|.|..|.+
T Consensus 22 s~~v~~Gei~glvG~nGaGKS 42 (238)
T d1vpla_ 22 SFEIEEGEIFGLIGPNGAGKT 42 (238)
T ss_dssp EEEECTTCEEEEECCTTSSHH
T ss_pred eeEEcCCCEEEEECCCCCCHH
Confidence 588999999999999998854
No 13
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.91 E-value=4 Score=32.99 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=18.7
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
++++-||++||+-|.|..|++
T Consensus 56 sl~i~~Ge~vaivG~nGsGKS 76 (281)
T d1r0wa_ 56 NLNIEKGEMLAITGSTGSGKT 76 (281)
T ss_dssp EEEECTTCEEEEEESTTSSHH
T ss_pred EEEEcCCCEEEEECCCCChHH
Confidence 488999999999999998864
No 14
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=41.17 E-value=40 Score=24.19 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=36.6
Q ss_pred cccEEEEEEEeeCCCCCCCCcceeEEEeeccCCCceEEEeecC--C---Ccce-----ecCCcEEEEEee---cCCCC-e
Q psy145 65 TTEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSISLKLP--E---TGVA-----VFPGQIVAARGS---NPSRN-Q 130 (203)
Q Consensus 65 q~~v~vvGRI~~Ds~egkLn~~Sv~LEgsr~~g~G~rV~Ldls--~---~~~S-----LFPGQIVavkG~---N~~G~-~ 130 (203)
...|.+.|||..-..-||+ +++-= ++.+ .++.+=++ . ..|. |=.|.||+++|. .-+|+ +
T Consensus 54 ~~~V~vaGRI~~~R~~Gk~----~F~~i-~D~~--g~iQi~~~~~~~~~~~~~~~~k~ld~GDiIgv~G~~~~TktGEls 126 (143)
T d1e1oa1 54 NIEVSVAGRMMTRRIMGKA----SFVTL-QDVG--GRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELS 126 (143)
T ss_dssp CCEEEEEEEEEEEEEETTE----EEEEE-EETT--EEEEEEEETTTSSTTHHHHTGGGCCTTCEEEEEEEEEECTTCCEE
T ss_pred CceEEEEEEEEEEcccCCe----eEEEE-EeCC--ceEEEEEccccchhhhHHHHHhcCCcccEEEeecccEECCCCcEE
Confidence 3469999999986533553 23322 3332 34555443 2 3343 336999999997 33553 3
Q ss_pred EEEeec
Q psy145 131 FIATKI 136 (203)
Q Consensus 131 fvV~eI 136 (203)
+.|+++
T Consensus 127 i~~~~~ 132 (143)
T d1e1oa1 127 IHCTEL 132 (143)
T ss_dssp EEEEEE
T ss_pred EEeeEE
Confidence 344444
No 15
>d2bv3a1 b.43.3.1 (A:283-403) Elongation factor G (EF-G), domain II {Thermus thermophilus [TaxId: 274]}
Probab=40.97 E-value=14 Score=25.99 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=36.9
Q ss_pred ccEEEEEEEeeCCCCCCCCcceeEEEeeccCCCceEE---Ee-ecCC----CcceecCCcEEEEEeec--CCCCeEEEe
Q psy145 66 TEITAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSI---SL-KLPE----TGVAVFPGQIVAARGSN--PSRNQFIAT 134 (203)
Q Consensus 66 ~~v~vvGRI~~Ds~egkLn~~Sv~LEgsr~~g~G~rV---~L-dls~----~~~SLFPGQIVavkG~N--~~G~~fvV~ 134 (203)
--.++++||.+ |.|...+-+.-. + .++.. +| .+.. +-=.+.+|+|+|+-|.. .+|+++.-.
T Consensus 40 ~G~i~~~RV~s----G~l~~g~~v~~~-~---~~~~~rv~~l~~~~g~~~~~v~~~~aGdI~~i~gl~~~~~GDTl~~~ 110 (121)
T d2bv3a1 40 VGRLTFIRVYS----GTLTSGSYVYNT-T---KGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGE 110 (121)
T ss_dssp TEEEEEEEEEE----SEEETTEEEEET-T---TTEEEEECEEEEECSSCEEEESEEETTCEEEEESCSSCCTTCEEEET
T ss_pred CCeEEeeeecc----cccCCCCEEEEc-c---CCCEEEEeeeeeeecccccEeeEeccccceEEeccCCceeCCEEecC
Confidence 35578999985 666666644322 1 12222 22 2222 33579999999999963 378888654
No 16
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.94 E-value=4.3 Score=32.21 Aligned_cols=21 Identities=14% Similarity=0.308 Sum_probs=19.0
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
++++.+|++||+-|.|.+|.+
T Consensus 20 sl~i~~Gei~~liGpsGsGKS 40 (232)
T d2awna2 20 NLDIHEGEFVVFVGPSGCGKS 40 (232)
T ss_dssp EEEECTTCEEEEECCTTSSHH
T ss_pred EEEEcCCCEEEEECCCCChHH
Confidence 588999999999999999865
No 17
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.62 E-value=4.2 Score=32.28 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=20.6
Q ss_pred cceecCCcEEEEEeecCCCCeEEEe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQFIAT 134 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~fvV~ 134 (203)
++++-|||+||+-|.|.+|..-.++
T Consensus 34 sl~i~~Ge~vaivG~sGsGKSTLl~ 58 (251)
T d1jj7a_ 34 TFTLRPGEVTALVGPNGSGKSTVAA 58 (251)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHH
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHH
Confidence 4788999999999999998654444
No 18
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=38.82 E-value=4.5 Score=31.97 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=19.0
Q ss_pred cceecCCcEEEEEeecCCCCeE
Q psy145 110 GVAVFPGQIVAARGSNPSRNQF 131 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~f 131 (203)
++++-||++||+-|.|.+|..=
T Consensus 22 sl~i~~Ge~vaivG~sGsGKST 43 (242)
T d1mv5a_ 22 SFEAQPNSIIAFAGPSGGGKST 43 (242)
T ss_dssp EEEECTTEEEEEECCTTSSHHH
T ss_pred EEEEcCCCEEEEECCCCCCHHH
Confidence 4889999999999999988553
No 19
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=38.14 E-value=4.7 Score=31.77 Aligned_cols=22 Identities=32% Similarity=0.367 Sum_probs=19.2
Q ss_pred CcceecCCcEEEEEeecCCCCe
Q psy145 109 TGVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~N~~G~~ 130 (203)
=+|++-+|+|+++-|.|..|++
T Consensus 25 vs~~i~~Gei~~liGpnGaGKS 46 (240)
T d1ji0a_ 25 IDLKVPRGQIVTLIGANGAGKT 46 (240)
T ss_dssp EEEEEETTCEEEEECSTTSSHH
T ss_pred eeEEECCCCEEEEECCCCCcHH
Confidence 3589999999999999998854
No 20
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=38.09 E-value=9.6 Score=26.56 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCCC--eEEEeeehhhh------cccCCCC
Q psy145 171 ADYLVNVFEKSYN--SAFITTVADFH------RAGSSGF 201 (203)
Q Consensus 171 ~DLL~~v~~~~Pd--vLvlt~~~~~~------~~~~~~~ 201 (203)
.+|++.+++..|+ ++++|+..+.. ++|..||
T Consensus 64 ~el~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~y 102 (138)
T d1a04a2 64 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGY 102 (138)
T ss_dssp HHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCCEEEEEEECCHHHHHHHHHcCCCEE
Confidence 5889999888777 78888877654 4566665
No 21
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=36.94 E-value=5.1 Score=31.70 Aligned_cols=24 Identities=13% Similarity=0.337 Sum_probs=20.0
Q ss_pred cceecCCcEEEEEeecCCCCeEEE
Q psy145 110 GVAVFPGQIVAARGSNPSRNQFIA 133 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~fvV 133 (203)
++++-||++||+-|.|.+|+.=.+
T Consensus 23 sl~i~~Ge~vaIvG~sGsGKSTLl 46 (241)
T d2pmka1 23 NLSIKQGEVIGIVGRSGSGKSTLT 46 (241)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHH
T ss_pred EEEEcCCCEEEEECCCCCCHHHHH
Confidence 488999999999999998865433
No 22
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=36.46 E-value=5.4 Score=31.86 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=19.9
Q ss_pred cceecCCcEEEEEeecCCCCeEEE
Q psy145 110 GVAVFPGQIVAARGSNPSRNQFIA 133 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~fvV 133 (203)
++++-||++||+-|.|.+|++=.+
T Consensus 38 sl~i~~Ge~vaivG~sGsGKSTLl 61 (255)
T d2hyda1 38 NLSIEKGETVAFVGMSGGGKSTLI 61 (255)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHH
T ss_pred EEEEcCCCEEEEECCCCCcHHHHH
Confidence 478899999999999999865433
No 23
>d1n0ua1 b.43.3.1 (A:344-481) Elongation factor 2 (eEF-2), domain II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.99 E-value=42 Score=23.83 Aligned_cols=16 Identities=19% Similarity=0.248 Sum_probs=13.8
Q ss_pred ceecCCcEEEEEeecC
Q psy145 111 VAVFPGQIVAARGSNP 126 (203)
Q Consensus 111 ~SLFPGQIVavkG~N~ 126 (203)
=+...|.|||+.|...
T Consensus 103 ~~a~AGdIvai~Gl~~ 118 (138)
T d1n0ua1 103 DDCPAGNIIGLVGIDQ 118 (138)
T ss_dssp SEEETTCEEEEESCTT
T ss_pred eEEecCcEEEEecccc
Confidence 3689999999999965
No 24
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]}
Probab=34.94 E-value=13 Score=27.50 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=21.1
Q ss_pred ceecCCcEEEEEee--cCCCCeEEEeec
Q psy145 111 VAVFPGQIVAARGS--NPSRNQFIATKI 136 (203)
Q Consensus 111 ~SLFPGQIVavkG~--N~~G~~fvV~eI 136 (203)
-.|.||++|.++|. |++++.|.+.=+
T Consensus 15 ~~~~~g~~i~i~g~~~~~~~~~~~iNl~ 42 (150)
T d1ulea_ 15 NDFKPESVAAIRSSAFNSKGGTTVFNFL 42 (150)
T ss_dssp EEECTTCEEEEECSCBCTTCCCEEEEEE
T ss_pred CCCcCCcEEEEEEEeeCCCCCeEEEEec
Confidence 46899999999996 778888887733
No 25
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]}
Probab=34.84 E-value=13 Score=26.58 Aligned_cols=27 Identities=30% Similarity=0.504 Sum_probs=22.3
Q ss_pred CcceecCCcEEEEEee-cCCCCeEEEee
Q psy145 109 TGVAVFPGQIVAARGS-NPSRNQFIATK 135 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~-N~~G~~fvV~e 135 (203)
+.++|-||+.+.++|+ ++..+.|.+.=
T Consensus 8 ~~~gL~~G~~i~i~G~~~~~~~~F~INl 35 (134)
T d1a78a_ 8 TNLNLKPGHCVEIKGSIPPDCKGFAVNL 35 (134)
T ss_dssp EEEEECTTEEEEEEEECCTTCSEEEEEE
T ss_pred EcCCCCcCCEEEEEEEECCCCCEEEEEE
Confidence 4689999999999997 44667899883
No 26
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=34.52 E-value=4.1 Score=31.83 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=21.1
Q ss_pred CcceecCCcEEEEEeecCCCCeEEEe
Q psy145 109 TGVAVFPGQIVAARGSNPSRNQFIAT 134 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~N~~G~~fvV~ 134 (203)
=++.+-+|++||+=|.|..|.+=..+
T Consensus 18 isl~I~~Gei~~iiG~nGaGKSTLl~ 43 (231)
T d1l7vc_ 18 LSGEVRAGEILHLVGPNGAGKSTLLA 43 (231)
T ss_dssp EEEEEETTCEEECBCCTTSSHHHHHH
T ss_pred EEEEEcCCCEEEEECCCCCcHHHHHH
Confidence 35788999999999999999754443
No 27
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.13 E-value=31 Score=24.22 Aligned_cols=56 Identities=18% Similarity=0.119 Sum_probs=32.1
Q ss_pred ccccEEEEEEEeeCCCCC-CCCcceeEEEeeccCCCceEEEeecCC---Ccce-------ecCCcEEEEEee
Q psy145 64 DTTEITAIGRIVCDTSDG-KLNAASVLLEGDEVTSGGRSISLKLPE---TGVA-------VFPGQIVAARGS 124 (203)
Q Consensus 64 sq~~v~vvGRI~~Ds~eg-kLn~~Sv~LEgsr~~g~G~rV~Ldls~---~~~S-------LFPGQIVavkG~ 124 (203)
..+.|++.|||..-..-| || ++++= |+.+.-..+-++.+. ..+. |=.|-+|.++|.
T Consensus 35 ~g~~V~v~GwV~~~R~~G~kl----~F~~L-rD~sg~iQ~~v~~~~~~~~~~~~~~~~~~l~~es~V~V~G~ 101 (134)
T d1eova1 35 SDKEVLFRARVHNTRQQGATL----AFLTL-RQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGI 101 (134)
T ss_dssp TTCEEEEEEEEEEEEECSSSE----EEEEE-EETTEEEEEEEECCSSSSSCHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCCEEEEEEEEEEEEeCCCcE----EEEEE-EcCCCcEEEEEEeccccchhHHHHHHHhcCCCCCEEEEEEE
Confidence 456899999999764223 22 24443 333222234444443 3333 338999999996
No 28
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.78 E-value=20 Score=25.36 Aligned_cols=29 Identities=17% Similarity=0.373 Sum_probs=22.8
Q ss_pred cceecCCcEEEEEee-cCCCCeEEEeecccC
Q psy145 110 GVAVFPGQIVAARGS-NPSRNQFIATKIYSD 139 (203)
Q Consensus 110 ~~SLFPGQIVavkG~-N~~G~~fvV~eI~~~ 139 (203)
..+|-||+.+.++|+ .++.+.|.|. +.++
T Consensus 6 n~~l~~G~~i~v~G~~~~~~~rF~IN-l~~g 35 (129)
T d1hlca_ 6 NMDMKPGSTLKITGSIADGTDGFVIN-LGQG 35 (129)
T ss_dssp EEEECTTCEEEEEEEECTTCCBEEEE-EEEE
T ss_pred ECCcCCCCEEEEEEEECCCCCEEEEE-EEcC
Confidence 468999999999998 4466889988 4443
No 29
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.34 E-value=7.1 Score=31.02 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=20.5
Q ss_pred cceecCCcEEEEEeecCCCCeEEEe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQFIAT 134 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~fvV~ 134 (203)
++++-+|++|++-|.|..|++=..+
T Consensus 26 sl~v~~Ge~~~liGpsGaGKSTLl~ 50 (239)
T d1v43a3 26 NLTIKDGEFLVLLGPSGCGKTTTLR 50 (239)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHH
T ss_pred eEEECCCCEEEEECCCCChHHHHHH
Confidence 5889999999999999988654333
No 30
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=32.25 E-value=6.7 Score=31.16 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=18.9
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
++++-+|+++++-|.|..|.+
T Consensus 23 sl~i~~Ge~~~liG~sGaGKS 43 (240)
T d1g2912 23 SLEVKDGEFMILLGPSGCGKT 43 (240)
T ss_dssp EEEEETTCEEEEECSTTSSHH
T ss_pred eeEEcCCCEEEEECCCCChHH
Confidence 488999999999999999865
No 31
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.32 E-value=15 Score=26.24 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=22.1
Q ss_pred CcceecCCcEEEEEee-cCCCCeEEEe
Q psy145 109 TGVAVFPGQIVAARGS-NPSRNQFIAT 134 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~-N~~G~~fvV~ 134 (203)
+.+.|=||+.|.++|+ ++..+.|.+.
T Consensus 6 ~n~~l~pG~~i~I~G~~~~~~~rF~IN 32 (132)
T d1qmja_ 6 TQLDVQPGECVKVKGKILSDAKGFSVN 32 (132)
T ss_dssp ESCCBCTTCCEEEEEEECTTCSBEEEE
T ss_pred eccCcCCCCEEEEEEEECCCCCEEEEE
Confidence 4678999999999998 5577889987
No 32
>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.13 E-value=3.7 Score=27.32 Aligned_cols=23 Identities=13% Similarity=0.229 Sum_probs=20.7
Q ss_pred hHHHHHHHHhcCCCeEEEeeehh
Q psy145 170 LADYLVNVFEKSYNSAFITTVAD 192 (203)
Q Consensus 170 L~DLL~~v~~~~PdvLvlt~~~~ 192 (203)
.+||++||.++..+.=+|+|+.+
T Consensus 37 a~dl~~yce~~~~~DpLl~g~p~ 59 (68)
T d1tbge_ 37 CEEFRDYVEERSGEDPLVKGIPE 59 (68)
T ss_dssp HHHHHHHHHTTTTSCHHHHCCCG
T ss_pred HHHHHHHHHhcCCCCCcccCCCC
Confidence 47999999999999999999865
No 33
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=30.84 E-value=17 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.238 Sum_probs=27.1
Q ss_pred cceEEEEcCc--ChHHHHHHHHhcCCCeEEEeeehhhh
Q psy145 159 KLRVSYEKGL--PLADYLVNVFEKSYNSAFITTVADFH 194 (203)
Q Consensus 159 ~l~i~~A~GP--pL~DLL~~v~~~~PdvLvlt~~~~~~ 194 (203)
..++++- |+ |..++++.+++++||++.|......|
T Consensus 31 G~~V~~L-G~~~p~e~iv~a~~~~~~d~v~lS~~~~~~ 67 (137)
T d1ccwa_ 31 GFNVVNI-GVLSPQELFIKAAIETKADAILVSSLYGQG 67 (137)
T ss_dssp TCEEEEE-EEEECHHHHHHHHHHHTCSEEEEEECSSTH
T ss_pred CCeEEec-ccccCHHHHHHHHHhcCCCEEEEeeccccc
Confidence 3455554 43 89999999999999999998766544
No 34
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=30.40 E-value=22 Score=23.54 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=27.0
Q ss_pred cceEEEEcCcChHHHHHHHHhcCCCeEEEee
Q psy145 159 KLRVSYEKGLPLADYLVNVFEKSYNSAFITT 189 (203)
Q Consensus 159 ~l~i~~A~GPpL~DLL~~v~~~~PdvLvlt~ 189 (203)
....++..|.+...|++++.++..|.+|+-.
T Consensus 76 ~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~ 106 (135)
T d2z3va1 76 KEDALLLEGVPAEAILQAARAEKADLIVMGT 106 (135)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTTCSEEEEES
T ss_pred eEEEEEEcCChHHHHHHHhhhhheeeEEecc
Confidence 4567788999999999999999999998853
No 35
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.35 E-value=19 Score=24.69 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=27.1
Q ss_pred cceEEEEcCcChHHHHHHHHhcCCCeEEEee
Q psy145 159 KLRVSYEKGLPLADYLVNVFEKSYNSAFITT 189 (203)
Q Consensus 159 ~l~i~~A~GPpL~DLL~~v~~~~PdvLvlt~ 189 (203)
..+..+..|.|...+++++++..+|.+|+-.
T Consensus 96 ~~~~~~~~G~~~~~I~~~a~~~~~dliV~G~ 126 (160)
T d1mjha_ 96 KVKDIIVVGIPHEEIVKIAEDEGVDIIIMGS 126 (160)
T ss_dssp EEEEEEEEECHHHHHHHHHHHTTCSEEEEES
T ss_pred eEEEEEEeccHHHHHhhhhhccccceEEecc
Confidence 4567888899999999999999999999853
No 36
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=29.00 E-value=8.5 Score=30.27 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=19.1
Q ss_pred CcceecCCcEEEEEeecCCCCe
Q psy145 109 TGVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 109 ~~~SLFPGQIVavkG~N~~G~~ 130 (203)
=++++.+|++||+-|.|.+|.+
T Consensus 24 isl~i~~Ge~~~iiG~sGsGKS 45 (230)
T d1l2ta_ 24 VNLNIKEGEFVSIMGPSGSGKS 45 (230)
T ss_dssp EEEEECTTCEEEEECSTTSSHH
T ss_pred eEEEEcCCCEEEEECCCCCCcc
Confidence 3589999999999999998854
No 37
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=27.66 E-value=39 Score=24.59 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=31.3
Q ss_pred cceEEEE-cCcChH----HHHHHHHhcCCCeEEEeeehhhhcccCCCCCC
Q psy145 159 KLRVSYE-KGLPLA----DYLVNVFEKSYNSAFITTVADFHRAGSSGFHE 203 (203)
Q Consensus 159 ~l~i~~A-~GPpL~----DLL~~v~~~~PdvLvlt~~~~~~~~~~~~~~~ 203 (203)
+.-+++. +||=+. -|. ....++-++|+|||...-+..|..+|||
T Consensus 67 k~gv~~~t~GpG~~N~~~gl~-~A~~~~~P~l~i~g~~~~~~~~~~~~Q~ 115 (174)
T d2ez9a2 67 KIGVCFGSAGPGGTHLMNGLY-DAREDHVPVLALIGQFGTTGMNMDTFQE 115 (174)
T ss_dssp SCEEEEECTTHHHHTTHHHHH-HHHHTTCCEEEEEEECCTTTTTSCCTTC
T ss_pred ceeEEeecccccccchhhhHH-HHHhcCccceeeeccccccccCcccccc
Confidence 3444444 688443 444 4566777799999999988888888875
No 38
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=27.17 E-value=11 Score=29.81 Aligned_cols=25 Identities=28% Similarity=0.336 Sum_probs=20.3
Q ss_pred cceecCCcEEEEEeecCCCCeEEEe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQFIAT 134 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~fvV~ 134 (203)
++.+-||++||+-|.|.+|++-.++
T Consensus 35 sl~i~~Ge~iaivG~sGsGKSTLl~ 59 (253)
T d3b60a1 35 NLKIPAGKTVALVGRSGSGKSTIAS 59 (253)
T ss_dssp EEEECTTCEEEEEECTTSSHHHHHH
T ss_pred EEEEcCCCEEEEECCCCChHHHHHH
Confidence 4788999999999999998654433
No 39
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=25.74 E-value=43 Score=22.83 Aligned_cols=63 Identities=14% Similarity=0.168 Sum_probs=36.9
Q ss_pred ccCccccEEEEEEEeeCC-----CCCCCCcceeEEEeeccC---CCceEEEeec-----CC--Ccc--eecCCcEEEEEe
Q psy145 61 LFGDTTEITAIGRIVCDT-----SDGKLNAASVLLEGDEVT---SGGRSISLKL-----PE--TGV--AVFPGQIVAARG 123 (203)
Q Consensus 61 ~~~sq~~v~vvGRI~~Ds-----~egkLn~~Sv~LEgsr~~---g~G~rV~Ldl-----s~--~~~--SLFPGQIVavkG 123 (203)
+....+.|..+|||+.|. +.| ..-.+..|+.++.. +.-+.+...+ .+ ... .|-.|+.|.|+|
T Consensus 2 ~~mm~N~v~L~G~l~~dpelr~T~~G-~~v~~f~la~~~~~~e~~~~r~~~~~i~vv~~g~~Ae~~~~~l~kG~~v~v~G 80 (111)
T d1v1qa_ 2 NSLMTNRLVLSGTVCRAPLRKVSPSG-IPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQG 80 (111)
T ss_dssp GGGCCEEEEEEEEEEEEEEEEECTTC-CEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESTGGGGGGTTCCTTCEEEEEE
T ss_pred CccceEEEEEEEEecCCcceEECCCC-CEEEEEEEEeccEEecccceEEEEEEEEEEEeCHHHHHHHHHhcCCCEEEEEE
Confidence 345567899999999996 123 12224555544322 2223333222 22 222 689999999999
Q ss_pred e
Q psy145 124 S 124 (203)
Q Consensus 124 ~ 124 (203)
+
T Consensus 81 ~ 81 (111)
T d1v1qa_ 81 F 81 (111)
T ss_dssp E
T ss_pred E
Confidence 7
No 40
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=24.13 E-value=7.4 Score=30.72 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=18.2
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
+|++-+|++|++-|.|..|.+
T Consensus 20 s~~i~~Ge~~~liGpsGaGKS 40 (229)
T d3d31a2 20 SLKVESGEYFVILGPTGAGKT 40 (229)
T ss_dssp EEEECTTCEEEEECCCTHHHH
T ss_pred EEEECCCCEEEEECCCCCcHH
Confidence 589999999999999987743
No 41
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=23.95 E-value=13 Score=29.32 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=18.8
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
++++-+|++|++-|.|.+|.+
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKS 45 (240)
T d3dhwc1 25 SLHVPAGQIYGVIGASGAGKS 45 (240)
T ss_dssp EEEECSSCEEEEEESTTSSHH
T ss_pred eEEEcCCCEEEEECCCCCCHH
Confidence 588999999999999998865
No 42
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=23.93 E-value=49 Score=24.30 Aligned_cols=42 Identities=12% Similarity=0.026 Sum_probs=30.6
Q ss_pred EEEEcCcChHHH---HHHHHhcCCCeEEEeeehhhhcccCCCCCC
Q psy145 162 VSYEKGLPLADY---LVNVFEKSYNSAFITTVADFHRAGSSGFHE 203 (203)
Q Consensus 162 i~~A~GPpL~DL---L~~v~~~~PdvLvlt~~~~~~~~~~~~~~~ 203 (203)
+++-+||-+..+ |-.+..++-++|+|||...-+..|..+|+|
T Consensus 72 ~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g~~~~~~~~~~~~Q~ 116 (184)
T d2djia2 72 TVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRELNMDAFQE 116 (184)
T ss_dssp EEECTTHHHHTTHHHHHHHHHHTCCEEEEEEESCGGGTTTTCTTC
T ss_pred eeccccccccchhHhHHHHHHhCccceeecccchhhHhhcCcccc
Confidence 345578844433 235677888999999998888888888875
No 43
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=22.91 E-value=13 Score=29.41 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=18.6
Q ss_pred cceecCCcEEEEEeecCCCCe
Q psy145 110 GVAVFPGQIVAARGSNPSRNQ 130 (203)
Q Consensus 110 ~~SLFPGQIVavkG~N~~G~~ 130 (203)
+|++-+|+|||+-|.|.+|.+
T Consensus 22 s~~i~~GEi~~iiG~sGsGKS 42 (258)
T d1b0ua_ 22 SLQARAGDVISIIGSSGSGKS 42 (258)
T ss_dssp EEEECTTCEEEEECCTTSSHH
T ss_pred eeEEcCCCEEEEECCCCCcHH
Confidence 588999999999999998854
No 44
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.68 E-value=41 Score=24.40 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=23.9
Q ss_pred cceEEEEcCc--ChHHHHHHHHhcCCCeEEEeeehhh
Q psy145 159 KLRVSYEKGL--PLADYLVNVFEKSYNSAFITTVADF 193 (203)
Q Consensus 159 ~l~i~~A~GP--pL~DLL~~v~~~~PdvLvlt~~~~~ 193 (203)
..++++- |+ |..++++.+++++||++-|++-.-.
T Consensus 34 G~~Vi~L-G~~~p~e~~~~~~~~~~~d~i~lS~l~~~ 69 (156)
T d3bula2 34 NYEIVDL-GVMVPAEKILRTAKEVNADLIGLSGLITP 69 (156)
T ss_dssp TCEEEEC-CSSBCHHHHHHHHHHHTCSEEEEECCSTH
T ss_pred CCEEEEC-CCCCCHHHHHHHHHhhCCCEEEEeccccc
Confidence 3455543 43 7788888888888888888775443
No 45
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.03 E-value=37 Score=23.76 Aligned_cols=24 Identities=25% Similarity=0.556 Sum_probs=20.3
Q ss_pred eecCCcEEEEEee-cCCCCeEEEee
Q psy145 112 AVFPGQIVAARGS-NPSRNQFIATK 135 (203)
Q Consensus 112 SLFPGQIVavkG~-N~~G~~fvV~e 135 (203)
.|-||+.+.++|+ ++..+.|.+.=
T Consensus 10 gl~~G~~i~i~G~~~~~~~~F~inl 34 (133)
T d2gala_ 10 GIRPGTVLRIRGLVPPNASRFHVNL 34 (133)
T ss_dssp CCCTTCEEEEEEECCTTCCBEEEEE
T ss_pred CCCCCCEEEEEEEECCCCCEEEEEE
Confidence 5889999999999 55778999873
No 46
>d1lkta_ b.90.1.1 (A:) Head-binding domain of phage P22 tailspike protein {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=21.39 E-value=22 Score=25.15 Aligned_cols=61 Identities=23% Similarity=0.269 Sum_probs=38.2
Q ss_pred EEEEEEeeCCCCCCCCcceeEEEeeccCCCceEE--EeecCCCcceecCCcEEEEEeecCCCCeEEEe
Q psy145 69 TAIGRIVCDTSDGKLNAASVLLEGDEVTSGGRSI--SLKLPETGVAVFPGQIVAARGSNPSRNQFIAT 134 (203)
Q Consensus 69 ~vvGRI~~Ds~egkLn~~Sv~LEgsr~~g~G~rV--~Ldls~~~~SLFPGQIVavkG~N~~G~~fvV~ 134 (203)
+.+|+|-.|. .-.-|-=.|+||. +.|+-.+| ++.+...+|-.|-|||.++--. .|+...|.
T Consensus 26 iYIGk~~TDP-~~p~NqI~Vyl~n--edG~~~~v~QPi~iN~~g~~vyngq~ak~vt~--~~hSMAvy 88 (104)
T d1lkta_ 26 IYIGQIDTDP-VNPANQIPVYIEN--EDGSHVQITQPLIINAAGKIVYNGQLVKIVTV--QGHSMAIY 88 (104)
T ss_dssp EEEESTTSCT-TSGGGBCCEEEEC--TTSCEEEECSSEEECTTSCEEETTEECCEEES--SCCEEEEE
T ss_pred EEEecCCCCC-CCccccccEEEEc--CCCCEeeecCCEEeccCCceeEeceeeeEEec--cCceEEEE
Confidence 4578887776 3233434477775 55544444 5566678999999999876542 24555443
No 47
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.62 E-value=44 Score=23.18 Aligned_cols=32 Identities=9% Similarity=-0.074 Sum_probs=27.9
Q ss_pred cceEEEEcCcChHHHHHHHHhcCCCeEEEeee
Q psy145 159 KLRVSYEKGLPLADYLVNVFEKSYNSAFITTV 190 (203)
Q Consensus 159 ~l~i~~A~GPpL~DLL~~v~~~~PdvLvlt~~ 190 (203)
+.+..+..|-+...+++++.+..+|.+|+-..
T Consensus 98 ~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~ 129 (171)
T d2gm3a1 98 GCEAWIKTGDPKDVICQEVKRVRPDFLVVGSR 129 (171)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHCCSEEEEEEC
T ss_pred ceEEEEEeCChHHHHHHHHhhcCCcEEEeccC
Confidence 56788889999999999999999998887654
No 48
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.53 E-value=5 Score=25.32 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=20.0
Q ss_pred hHHHHHHHHhcCCCeEEEeeehh
Q psy145 170 LADYLVNVFEKSYNSAFITTVAD 192 (203)
Q Consensus 170 L~DLL~~v~~~~PdvLvlt~~~~ 192 (203)
.+||++||.++.+++=+|||+..
T Consensus 27 a~~l~~y~e~~~~~Dpll~g~~~ 49 (54)
T d1gg2g_ 27 AADLMAYCEAHAKEDPLLTPVPA 49 (54)
T ss_dssp HHHHHHHHHHHGGGCTTTSCCCT
T ss_pred HHHHHHHHHhcCcCCCCcCCCCC
Confidence 57999999999999989998754
Done!