BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1450
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P09957|YELL_DROME Protein yellow OS=Drosophila melanogaster GN=y PE=1 SV=1
Length = 541
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ WS +D+ +P+++ +D A+ G Y + + V+ F GN R+FVT P+
Sbjct: 29 YSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHF---------GN---RLFVTVPR 76
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ RS GSP L P+P+W +++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 77 WRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + V+DL D I R++ P N+ I +D C
Sbjct: 137 TGTV-GIGNTTTNPCPYAVNVFDLTT-DTRIRRYELPGVDTNPNTFIANIAVDI-GKNCD 193
Query: 184 RQYA 187
YA
Sbjct: 194 DAYA 197
>sp|O02437|YELL_DROSU Protein yellow OS=Drosophila subobscura GN=y PE=3 SV=1
Length = 568
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +PS++ ++ A+ G Y ++ + V+ F GN R+FVT P+
Sbjct: 36 YSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVEHF---------GN---RLFVTVPR 83
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ S GSP L P+P+W A++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 84 WRDGIPATLTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLD 143
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVID 176
TG + G T CP I ++DL D I R++ P + N+ I +D
Sbjct: 144 TGTV-GIGNTTTNPCPYAINIFDLAT-DTRIRRYELPAADTNPNTFIANIAVD 194
>sp|P62407|YELL_DROSI Protein yellow OS=Drosophila simulans GN=y PE=3 SV=1
Length = 541
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ +D A+ G Y + + V+ F GN R+FVT P+
Sbjct: 29 YSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHF---------GN---RLFVTVPR 76
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ RS GSP L P+P+W +++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 77 WRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + V+DL D I R++ P N+ I +D C
Sbjct: 137 TGTV-GIGNTTTNPCPYAVNVFDLTT-DTRIRRYELPGVDTNPNTFIANIAVDI-GKNCD 193
Query: 184 RQYA 187
YA
Sbjct: 194 DAYA 197
>sp|P62408|YELL_DROMA Protein yellow OS=Drosophila mauritiana GN=y PE=3 SV=1
Length = 541
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ +D A+ G Y + + V+ F GN R+FVT P+
Sbjct: 29 YSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHF---------GN---RLFVTVPR 76
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ RS GSP L P+P+W +++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 77 WRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + V+DL D I R++ P N+ I +D C
Sbjct: 137 TGTV-GIGNTTTNPCPYAVNVFDLTT-DTRIRRYELPGVDTNPNTFIANIAVDI-GKNCD 193
Query: 184 RQYA 187
YA
Sbjct: 194 DAYA 197
>sp|Q9GP81|YELL_DROGU Protein yellow OS=Drosophila guanche GN=y PE=3 SV=1
Length = 568
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +PS++ ++ A+ G Y ++ + V+ F GN R+FVT P+
Sbjct: 36 YSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVEHF---------GN---RLFVTVPR 83
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ S GSP L P+P+W A++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 84 WRDGIPATLTYINMDHSVTGSPELIPYPDWRANTAGDCSNSITTAYRIKVDECGRLWVLD 143
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVID 176
TG + G T CP I ++DL + I R++ P + N+ I +D
Sbjct: 144 TGTV-GIGNTTTNPCPYAINIFDLTTNTR-IRRYELPAADTNPNTFIANIAVD 194
>sp|Q9BI23|YELL_DROER Protein yellow OS=Drosophila erecta GN=y PE=3 SV=1
Length = 541
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ ++ A+ G Y + + V+ F GN R+FVT P+
Sbjct: 29 YSWNQLDFAFPNARLKEQALASGDYIPQNALPVGVEHF---------GN---RLFVTVPR 76
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ RS GSP L P+P+W +++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 77 WRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + VYDL D I R+ P N+ I +D C
Sbjct: 137 TGTV-GIGNTTTNPCPYAVNVYDLTT-DTRIRRYVLPAVDTNPNTFIANIAVDI-GKNCD 193
Query: 184 RQYA 187
YA
Sbjct: 194 DAYA 197
>sp|Q9GP71|YELL_DROMD Protein yellow OS=Drosophila madeirensis GN=y PE=3 SV=1
Length = 568
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ ++ A+ G Y ++ + V+ F GN R+FVT P+
Sbjct: 36 YSWNQLDFAFPNARLKEQALASGDYIPTNALPVGVEHF---------GN---RLFVTVPR 83
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ S GSP L P+P+W A++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 84 WRDGIPATLTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLD 143
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVID 176
TG + G T CP I ++DL + I R++ P + N+ I +D
Sbjct: 144 TGTV-GIGNTTTNPCPYAINIFDLTTNTR-IRRYELPAADTNPNTFIANIAVD 194
>sp|Q9BI18|YELL_DROPS Protein yellow OS=Drosophila pseudoobscura pseudoobscura GN=y PE=3
SV=2
Length = 560
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ ++ A+ G Y + + V+ F GN R+FVT P+
Sbjct: 38 YSWNQLDFAFPNARLKEQAMASGDYIPQNALPVGVEHF---------GN---RLFVTVPR 85
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ S GSP L P+P+W A++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 86 WRDGIPATLTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLD 145
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + V+DL + I R++ P + N+ I +D C
Sbjct: 146 TGTV-GIGNTTTNPCPYAVNVFDLTTNTR-IRRYELPAADTNPNTFIANIAVDI-GKNCD 202
Query: 184 RQYA 187
YA
Sbjct: 203 DAYA 206
>sp|Q9BI17|YELL_DROYA Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
Length = 541
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 102/184 (55%), Gaps = 16/184 (8%)
Query: 5 HEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTTPK 64
+ W+ +D+ +P+++ ++ A+ G Y + + V+ F GN R+FVT P+
Sbjct: 29 YSWNQLDFAFPNARLKEQALASGDYIPQNGLPVGVEHF---------GN---RLFVTVPR 76
Query: 65 LRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNC-DGLTSVFRVEVDECGRLWVLD 123
R GIP TL+ ++ RS GSP L P+P+W +++ G+C + +T+ +R++VDECGRLWVLD
Sbjct: 77 WRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
Query: 124 TGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANSLPLTIVIDTRNPQCT 183
TG + G T CP + V+DL D I R++ P N+ I +D C
Sbjct: 137 TGTV-GIGNTTTNPCPYAVNVFDLTT-DTRIRRYELPAVDTNPNTFIANIAVDI-GKNCD 193
Query: 184 RQYA 187
YA
Sbjct: 194 DAYA 197
>sp|O97432|MRJP5_APIME Major royal jelly protein 5 OS=Apis mellifera GN=MRJP5 PE=2 SV=1
Length = 598
Score = 95.1 bits (235), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 1 MTVLHEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFV 60
M V+HEW +DY + S + R A++ G+Y+ + DVD + FV
Sbjct: 35 MNVIHEWKYLDYDFGSDERRQAAMQSGEYDHTKNYPFDVDQW------------RGMTFV 82
Query: 61 TTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLW 120
T P+ + G+P +L+ +S K +G LL+P+P+W + +C G+ S +++ +D+ RLW
Sbjct: 83 TVPRYK-GVPSSLNVISEKIG-NGGRLLQPYPDWSWANYKDCSGIVSAYKIAIDKFDRLW 140
Query: 121 VLDTGKLNAFGETPKVVCPPQIVVYDLN---QGDKVILRHKFPDSQIAANSLPLTIVIDT 177
+LD+G +N + +C P++ V+DLN Q +V++ H + N +++V+
Sbjct: 141 ILDSGIIN----NTQPMCSPKLHVFDLNTSHQLKQVVMPHDIAVNASTGNGGLVSLVVQA 196
Query: 178 RNPQCTRQY 186
+P T Y
Sbjct: 197 MDPVNTIVY 205
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 OS=Apis mellifera GN=MRJP3 PE=1 SV=1
Length = 544
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 95/168 (56%), Gaps = 20/168 (11%)
Query: 1 MTVLHEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFV 60
M V++EW +D+ + S + RD AI+ G+++ + DVD + + FV
Sbjct: 37 MKVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNYPFDVDRW------------RDKTFV 84
Query: 61 TTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLW 120
T + G+P +L+ +++K+ K G PLL P+P+W +C G+ S F++ VD+ RLW
Sbjct: 85 TIER-NNGVPSSLNVVTNKKGK-GGPLLRPYPDWSFAKYEDCSGIVSAFKIAVDKFDRLW 142
Query: 121 VLDTGKLNAFGETPKVVCPPQIVVYDLNQGDKVILRHKFPDSQIAANS 168
VLD+G +N + +C P+++ +DL + K++ + + P + IA N+
Sbjct: 143 VLDSGLVN----NNQPMCSPKLLTFDL-KTSKLVKQVEIPHN-IAVNA 184
>sp|O18330|MRJP1_APIME Major royal jelly protein 1 OS=Apis mellifera GN=MRJP1 PE=1 SV=1
Length = 432
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 18/145 (12%)
Query: 3 VLHEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTT 62
+LHEW DY + S + R +AI G+Y+ + D+D + +IFVT
Sbjct: 33 ILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQW------------HDKIFVTM 80
Query: 63 PKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLWVL 122
+ G+P +L+ +S K+ DG PLL+P+P+W +C G+ S ++ +D+C RLWVL
Sbjct: 81 LRY-NGVPSSLNVIS-KKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVL 138
Query: 123 DTGKLNAFGETPKVVCPPQIVVYDL 147
D+G +N + +C P+++ +DL
Sbjct: 139 DSGLVN----NTQPMCSPKLLTFDL 159
>sp|O77061|MRJP2_APIME Major royal jelly protein 2 OS=Apis mellifera GN=MRJP2 PE=1 SV=1
Length = 452
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 18/147 (12%)
Query: 1 MTVLHEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFV 60
+ V+HEW DY + S + R AI+ G+Y+ + DVD + + FV
Sbjct: 32 LNVIHEWKYFDYDFGSEERRQAAIQSGEYDHTKNYPFDVDQW------------RDKTFV 79
Query: 61 TTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLW 120
T + G+P TL+ +S K K G LL+P+P+W +C + S F++ +D+ RLW
Sbjct: 80 TILRY-DGVPSTLNVISGKTGK-GGRLLKPYPDWSFAEFKDCSKIVSAFKIAIDKFDRLW 137
Query: 121 VLDTGKLNAFGETPKVVCPPQIVVYDL 147
VLD+G +N P VC P++ V+DL
Sbjct: 138 VLDSGLVNR--TVP--VCAPKLHVFDL 160
>sp|Q17061|MRJP4_APIME Major royal jelly protein 4 OS=Apis mellifera GN=MRJP4 PE=1 SV=1
Length = 464
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
Query: 1 MTVLHEWSSVDYVWPSSQDRDNAIRDGKYNASSVAILDVDVFDPANYGNASGNKEKRIFV 60
+ V+H+W +DY + + + R AI+ G+Y+ + LDVD + + F+
Sbjct: 36 LNVIHKWKYLDYDFDNDERRQAAIQSGEYDRTKNYPLDVDQW------------HNKTFL 83
Query: 61 TTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLW 120
+ G+P +L+ +S K + +G LL+P+P+W +C G+ S ++ +DE RLW
Sbjct: 84 AVIRY-NGVPSSLNVVSDK-TGNGGRLLQPYPDWSFAKYEDCSGIVSAHKIAIDEYERLW 141
Query: 121 VLDTGKLNAFGETPKVVCPPQIVVYDLN 148
VLD+G +N + +C P++ +DLN
Sbjct: 142 VLDSGLVN----NTQPMCSPKLFAFDLN 165
>sp|Q9CWL2|CASZ1_MOUSE Zinc finger protein castor homolog 1 OS=Mus musculus GN=Casz1 PE=2
SV=3
Length = 1761
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 18 QDRDNAIRDGKYNASSVAILDVDVFDPANY--GNASGNKEKRIFVTTPKLRTGIPVTLST 75
Q+ D+A G + AS LD+ V DP+N G+A + K+ G P S
Sbjct: 912 QEPDSAGTPGPHEASQDRSLDLTVKDPSNESNGHAVSANSSLLSSLMNKMSQGNPSLESF 971
Query: 76 LSSKRSKDGSPLLEPFP 92
LS K +GSP EP P
Sbjct: 972 LSIKTEAEGSPAGEPSP 988
>sp|Q9A728|TRPD_CAUCR Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus
(strain ATCC 19089 / CB15) GN=trpD PE=3 SV=1
Length = 341
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 19/103 (18%)
Query: 49 NASGNKEKRIFVTTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSV 108
N +G K + + V+ P+ I L L ++R+ W H G D LT+
Sbjct: 185 NPAGAKRQVVGVSAPRFVEPIAKALGALGAERA------------WSVHGSG-MDELTTT 231
Query: 109 FRVEVDECGRLWVLDTGKLNAFGETPKVVCPPQIVVYDLNQGD 151
EV E W G + F TP+ V P+ + DL GD
Sbjct: 232 GETEVAE----W--RDGVVRLFKITPEAVGLPRAALADLTGGD 268
>sp|B8GWP8|TRPD_CAUCN Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=trpD PE=3 SV=1
Length = 341
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 19/103 (18%)
Query: 49 NASGNKEKRIFVTTPKLRTGIPVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSV 108
N +G K + + V+ P+ I L L ++R+ W H G D LT+
Sbjct: 185 NPAGAKRQVVGVSAPRFVEPIAKALGALGAERA------------WSVHGSG-MDELTTT 231
Query: 109 FRVEVDECGRLWVLDTGKLNAFGETPKVVCPPQIVVYDLNQGD 151
EV E W G + F TP+ V P+ + DL GD
Sbjct: 232 GETEVAE----W--RDGVVRLFKITPEAVGLPRAALADLTGGD 268
>sp|Q97GX8|GLGC_CLOAB Glucose-1-phosphate adenylyltransferase OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=glgC PE=3 SV=1
Length = 380
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 95 DAHSEGNCDGLTSVFRVEVDECGRLWVLDT---GKLNAFGETPK 135
D H + N D +VF V ++E R +++T ++N F E PK
Sbjct: 140 DFHKKKNADATIAVFEVPLNEASRFGIMNTDEDDRINEFEEKPK 183
>sp|Q69ZR9|F208A_MOUSE Protein FAM208A OS=Mus musculus GN=Fam208a PE=2 SV=2
Length = 1610
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 70 PVTLSTLSSKRSKDGSPLLEPFPNWDAHSEGNCDGLTSVFRVEVDECGRLWVLDTGKLNA 129
P+++ +L S SK+ L+P P + H N +TS+ E + + + G +
Sbjct: 249 PLSVKSLESMLSKNA---LDPTPKHECHVSKNASRITSLLAYRAYELTQYYFYEYG-FDE 304
Query: 130 FGETPKVVCPPQIVVY 145
P+ VCP +V +
Sbjct: 305 VRRRPRHVCPYAVVSF 320
>sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Homo sapiens GN=CASZ1 PE=1
SV=4
Length = 1759
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 28/122 (22%)
Query: 27 GKYNASSVAILDVDVFDPANYGNASGNKEKRIFVTT--PKLRTGIPVTLSTLSSKRSKDG 84
G + AS LD+ V +P+N N +++ K+ G P S L+ K +G
Sbjct: 921 GPHEASQDRSLDLTVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGSLLNIKAEAEG 980
Query: 85 SPLLEPFP----------------NWDAH---------SEGNCDGLTSV-FRVEVDECGR 118
SP EP P W + +G CD L F V+ECG
Sbjct: 981 SPAAEPSPFLGKAVKALVQEKLAEPWKVYLRRFGTKDFCDGQCDFLHKAHFHCVVEECGA 1040
Query: 119 LW 120
L+
Sbjct: 1041 LF 1042
>sp|A4UGR9|XIRP2_HUMAN Xin actin-binding repeat-containing protein 2 OS=Homo sapiens
GN=XIRP2 PE=1 SV=2
Length = 3374
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 99 EGNCDGLTSVFRVEV---DECGRLWVLDTGKLNAFGETPKVVCPPQIVVYDLNQGDKVIL 155
EG+ +T+V + EV D G W+ +T L++ ++ V + D+ +GD +
Sbjct: 1153 EGSYHEVTTVKKEEVIHGDVRGTRWLFETKPLDSINKSETVYVIKSVTQEDIQKGDVSSV 1212
Query: 156 RHKF---PDSQIAANS---LPLTIVIDTRNPQCTRQY 186
R++F P QI+ S +P I N + +RQ+
Sbjct: 1213 RYRFETQPLDQISEESHNIMPSIDHIQGGNVKTSRQF 1249
>sp|A3DK82|GLGC_CLOTH Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1
Length = 426
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 95 DAHSEGNCDGLTSVFRVEVDECGRLWVLDT---GKLNAFGETPK 135
D H E N D SV V +E R +++T GK+ F E P+
Sbjct: 140 DFHKENNADATISVINVPWEEASRYGIMNTYENGKIYEFEEKPQ 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,282,160
Number of Sequences: 539616
Number of extensions: 3201946
Number of successful extensions: 5963
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5925
Number of HSP's gapped (non-prelim): 23
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)